Psyllid ID: psy17682

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490
Protein Sequence
DLYPDTVGDTAALTADEWFAVLFRLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTVGDTAALTADEWFAGNELFQDDLYPDTVGDTAALTADEWFA
Secondary Structure (PSIPRED)
cccccccccEEEEcccccEEEEcEEcccccccccccEEccccccccEEEEEEcccccEEEEEcccccccEEEEcccccccccccccccEEEEccccEEEcccccccccEEEEccccEEEcEEEEcEEcEEEEEcccccEEEEcccccccccccccccccEEEcccccEEEEEEccccccEEEEEcccccEEEEEcccccEEEEccccEEEcccccccEEEEEEccccccEEEEEEccccEEEEEccccEEEEEEccccccEEEEEEcccccEEEEEEcccEEEEEEcccccEEEEEcccccccEEEEEEcccccEEEEEEccccEEEEEEEcccccccccEEEEccccccEEEEEEcccccEEEEEEcccccEEEEEEEccccEEEEcccEEccccEEEEEEccccEEEEEccEEEEEEEEEcccEEEEEEEEEEccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccEEEEcccccEEEEEEccccccccccccEEEEEcccccEEEEEEccccccEEEEEccccEEEEEEcccccEEEEcccccEEEEEEEEcccccccEEcccccccEEEEEEEcccHHHHHHHHHHcccccccEEEEcccccEEEEccccccccEEEcccccEEEEEEccccccEEEEEccccEEEEEEcccccEcccccccEEEEccccccccEEEEccccccEEEEEccccEEEEEEccccccEEEEccccccEEEEEEcccccEEEEEcccccEEEEEccccEEEEEccccccccccEEEEEccccEEEcccccccccEEEEEcccccccccEEEEEcccccEEEEEccccccEEEEEEcccccEEEEEEcccccHHEEEEccccccccccEEEcccccccccHcHEEEEEEEcccccEEEEEEEEcccHHHHHHHcccccccccccccHHHHHccccccccEEcccccccccccccHHHcc
Coil and Loop (DISEMBL)
dlypdtvgdtaALTADEWFAVLFRLtyfsprtltepVVDLLYHQRRVGLVLWHPTAQNVLltagkeaepilislkdgyippseksksalkvtkrsnvldkvggkgganrnstaneiTISEDYVKEFKEEIRKLKSQqalsilpppstapntgrinadhalvgghkgpvldiawsphddnviasgsedcvvkvwqipdggisrtltepVVDLLYHQRRVGLVLWHPTAQNVlltagsdnnvaiwnvgtgEIMIQIechpdivysaswnwdgskllttckdkkmriinprtgaieeeavchegskATRAIYLKSGLifttgfskmserqyslrapdhldepiVMVEldtsngvmfplydpdtnlvylcgkgdsvIRYFeitaeppfvhyintfqtpdpqrgigmmpkrgcdvnsceigrffrlnnsglcqvvsmtvprkselfqddlypdtvgdtaaLTADewfagnelfqddlypdtvgdtaaltadewfa
Flexible Loop (DISEMBL)
dlypdtvgdtaaltadEWFAVLFRLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISlkdgyippseksksalkvtkrsnvldkvggkgganrnstaneitisEDYVKEFKEEIRKLksqqalsilpppstapntGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTVGDTAALTADEWFAGNELFQDDLYPDTVGDTAALTADEWFA
Low Complexity Region (SEG)
DLYPDTVGDTAALTADEWFAVLFRLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTVGDTAALTADEWFAGNELFQDDLYPDTVGDTAALTADEWFA
Disordered region (IsUnstruct)
*******GDTAALTADEWFAVLFRLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYI***************************************************************************NADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTVGDTAALTADEWFAGNELFQDDLYPDTVGDTAALTAD****
Disordered Region (DISOPRED)
DLYPDTVGDTAALTADEWFAVLFRLTYFSPRTLTEPVVDLLYHQRRVGLVLW******************LISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGA*******H*GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTVGDTAALTADEWFAGNELF**********************
Disordered Region (DISEMBL)
DLYPDTVGDTAALTADEWFAVLFRLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTVGDTAALTADEWFAGNELFQDDLYPDTVGDTAALTADEWFA
Disordered Region (DISPRO)
DLYPDTVGDTAALTADEWFAVLFRLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTVGDTAALTADEWFAGNELFQDDLYPD***************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
DLYPDTVGDTAALTADEWFAVLFRLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTVGDTAALTADEWFAGNELFQDDLYPDTVGDTAALTADEWFA
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	490	2.2.26 [Sep-21-2011]
Q9ULV4	474	Coronin-1C OS=Homo sapien	yes	N/A	0.638	0.660	0.610	1e-115
Q9WUM4	474	Coronin-1C OS=Mus musculu	yes	N/A	0.638	0.660	0.607	1e-114
Q5NVK4	489	Coronin-1B OS=Pongo abeli	yes	N/A	0.644	0.646	0.583	1e-113
Q9XS70	486	Coronin-1B OS=Oryctolagus	no	N/A	0.644	0.650	0.586	1e-113
Q9BR76	489	Coronin-1B OS=Homo sapien	no	N/A	0.644	0.646	0.583	1e-113
Q920M5	471	Coronin-6 OS=Mus musculus	no	N/A	0.644	0.670	0.579	1e-112
Q6QEF8	472	Coronin-6 OS=Homo sapiens	no	N/A	0.644	0.669	0.573	1e-112
Q920J3	472	Coronin-6 OS=Rattus norve	no	N/A	0.644	0.669	0.576	1e-112
Q9WUM3	484	Coronin-1B OS=Mus musculu	no	N/A	0.644	0.652	0.579	1e-112
O89046	484	Coronin-1B OS=Rattus norv	no	N/A	0.644	0.652	0.576	1e-111

>sp|Q9ULV4|COR1C_HUMAN Coronin-1C OS=Homo sapiens GN=CORO1C PE=1 SV=1

 Score =  415 bits (1067), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 193/316 (61%), Positives = 242/316 (76%), Gaps = 3/316 (0%)

Query: 151 TGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD 210
           TGRI+  +  V GH GPVLDI W PH+D VIASGSEDC V VWQIP+ G++ +LTEPVV 
Sbjct: 66  TGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVI 125

Query: 211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWD 269
           L  H +RVG+V WHPTA+NVLL+AG DN + IWNVGTGE +I ++  H D++Y+ SWN +
Sbjct: 126 LEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWNRN 185

Query: 270 GSKLLTTCKDKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQY 328
           GS + T  KDKK+R+I+PR   I  E+   HEG++  RAI+L  G +FTTGFS+MSERQ 
Sbjct: 186 GSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQL 245

Query: 329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI 388
           +L  P ++ EPI + E+DTSNGV+ P YDPDT+++YLCGKGDS IRYFEIT E P+VHY+
Sbjct: 246 ALWNPKNMQEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPYVHYL 305

Query: 389 NTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPD 448
           NTF + +PQRG+G MPKRG DVN CEI RFF+L+    C+ + MTVPRKS+LFQDDLYPD
Sbjct: 306 NTFSSKEPQRGMGYMPKRGLDVNKCEIARFFKLHERK-CEPIIMTVPRKSDLFQDDLYPD 364

Query: 449 TVGDTAALTADEWFAG 464
           T G  AAL A+EWF G
Sbjct: 365 TAGPEAALEAEEWFEG 380

May be involved in cytokinesis, motility, and signal transduction.
Homo sapiens (taxid: 9606)

>sp|Q9WUM4|COR1C_MOUSE Coronin-1C OS=Mus musculus GN=Coro1c PE=1 SV=2

 Score =  414 bits (1063), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 192/316 (60%), Positives = 242/316 (76%), Gaps = 3/316 (0%)

Query: 151 TGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD 210
           TGRI+  +  V GH GPVLDI W PH+D VIASGSEDC V VWQIP+ G++ +LTEPVV 
Sbjct: 66  TGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVI 125

Query: 211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWD 269
           L  H +RVG+V WHPTA+NVLL+AG DN + IWNVGTGE +I ++  H D++Y+ SW+ +
Sbjct: 126 LEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWSRN 185

Query: 270 GSKLLTTCKDKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQY 328
           GS + T  KDKK+R+I+PR   I  E+   HEG++  RAI+L  G +FTTGFS+MSERQ 
Sbjct: 186 GSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQL 245

Query: 329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI 388
           +L  P ++ EPI + E+DTSNGV+ P YDPDT+++YLCGKGDS IRYFEIT E P+VHY+
Sbjct: 246 ALWNPKNMQEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPYVHYL 305

Query: 389 NTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPD 448
           NTF + +PQRG+G MPKRG DVN CEI RFF+L+    C+ + MTVPRKS+LFQDDLYPD
Sbjct: 306 NTFSSKEPQRGMGYMPKRGLDVNKCEIARFFKLHERK-CEPIIMTVPRKSDLFQDDLYPD 364

Query: 449 TVGDTAALTADEWFAG 464
           T G  AAL A+EWF G
Sbjct: 365 TAGPEAALEAEEWFEG 380

May be involved in cytokinesis, motility, and signal transduction.

Mus musculus (taxid: 10090)

>sp|Q5NVK4|COR1B_PONAB Coronin-1B OS=Pongo abelii GN=CORO1B PE=2 SV=2

 Score =  409 bits (1051), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 186/319 (58%), Positives = 243/319 (76%), Gaps = 3/319 (0%)

Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV 209
            TGRI+  +  V GH GPVLDI W PH+D VIASGSEDC V VWQIP+ G++  LTEPVV
Sbjct: 67  KTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLTEPVV 126

Query: 210 DLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-HPDIVYSASWNW 268
            L  H +RVG++ WHPTA+NVLL+AG DN V IWNVGT E + +++  HPD++Y+ SWN 
Sbjct: 127 VLEGHTKRVGIIAWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNVSWNR 186

Query: 269 DGSKLLTTCKDKKMRIINPRTGA-IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQ 327
           +GS   + CKDK +RII+PR G  + E    HEG++  RAI+L  G +FTTGFS+MSERQ
Sbjct: 187 NGSLFCSACKDKSVRIIDPRQGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQ 246

Query: 328 YSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHY 387
            +L  P++L+EP+ + ELD+SNG + P YDPDT++VY+CGKGDS IRYFEIT EPP++H+
Sbjct: 247 LALWDPENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITEEPPYIHF 306

Query: 388 INTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYP 447
           +NTF + +PQRG+G MPKRG +V+ CEI RF++L+    C+ + MTVPRKS+LFQDDLYP
Sbjct: 307 LNTFTSKEPQRGMGSMPKRGLEVSKCEIARFYKLHERK-CEPIVMTVPRKSDLFQDDLYP 365

Query: 448 DTVGDTAALTADEWFAGNE 466
           DT G  AAL A+EW +G +
Sbjct: 366 DTAGPEAALEAEEWVSGRD 384

Regulates leading edge dynamics and cell motility in fibroblasts. May be involved in cytokinesis and signal transduction.

Pongo abelii (taxid: 9601)

>sp|Q9XS70|COR1B_RABIT Coronin-1B OS=Oryctolagus cuniculus GN=CORO1B PE=1 SV=1

 Score =  408 bits (1048), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 187/319 (58%), Positives = 243/319 (76%), Gaps = 3/319 (0%)

Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV 209
            TGRI+  +  V GH GPVLDI W PH+D VIASGSEDC V VWQIP+ G++  LTEPVV
Sbjct: 67  KTGRIDKAYPTVCGHTGPVLDIEWCPHNDGVIASGSEDCTVMVWQIPEDGLTSPLTEPVV 126

Query: 210 DLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-HPDIVYSASWNW 268
            L  H +RVG+V WHPTA+NVLL+AG DN V IWNVGT E + +++  HPD++Y+ SWN 
Sbjct: 127 VLEGHTKRVGIVTWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNVSWNR 186

Query: 269 DGSKLLTTCKDKKMRIINPRTGA-IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQ 327
           +GS   + CKDK +RII+PR G  + E    HEG++  RAI+L  G +FTTGFS+MSERQ
Sbjct: 187 NGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQ 246

Query: 328 YSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHY 387
            +L  P++L+EP+ + ELD+SNG + P YDPDT++VY+CGKGDS IRYFEIT EPP++H+
Sbjct: 247 LALWDPENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITDEPPYIHF 306

Query: 388 INTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYP 447
           +NTF + +PQRG+G MPKRG +V+ CEI RF++L+    C+ + MTVPRKS+LFQDDLYP
Sbjct: 307 LNTFTSKEPQRGVGSMPKRGLEVSKCEIARFYKLHERK-CEPIVMTVPRKSDLFQDDLYP 365

Query: 448 DTVGDTAALTADEWFAGNE 466
           DT G  AAL A+EW +G +
Sbjct: 366 DTAGPEAALEAEEWVSGRD 384

Regulates leading edge dynamics and cell motility in fibroblasts. May be involved in cytokinesis and signal transduction.

Oryctolagus cuniculus (taxid: 9986)

>sp|Q9BR76|COR1B_HUMAN Coronin-1B OS=Homo sapiens GN=CORO1B PE=1 SV=1

 Score =  407 bits (1047), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 186/319 (58%), Positives = 243/319 (76%), Gaps = 3/319 (0%)

Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV 209
            TGRI+  +  V GH GPVLDI W PH+D VIASGSEDC V VWQIP+ G++  LTEPVV
Sbjct: 67  KTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLTEPVV 126

Query: 210 DLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-HPDIVYSASWNW 268
            L  H +RVG++ WHPTA+NVLL+AG DN V IWNVGT E + +++  HPD++Y+ SWN 
Sbjct: 127 VLEGHTKRVGIIAWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNVSWNH 186

Query: 269 DGSKLLTTCKDKKMRIINPRTGA-IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQ 327
           +GS   + CKDK +RII+PR G  + E    HEG++  RAI+L  G +FTTGFS+MSERQ
Sbjct: 187 NGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQ 246

Query: 328 YSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHY 387
            +L  P++L+EP+ + ELD+SNG + P YDPDT++VY+CGKGDS IRYFEIT EPP++H+
Sbjct: 247 LALWDPENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITEEPPYIHF 306

Query: 388 INTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYP 447
           +NTF + +PQRG+G MPKRG +V+ CEI RF++L+    C+ + MTVPRKS+LFQDDLYP
Sbjct: 307 LNTFTSKEPQRGMGSMPKRGLEVSKCEIARFYKLHERK-CEPIVMTVPRKSDLFQDDLYP 365

Query: 448 DTVGDTAALTADEWFAGNE 466
           DT G  AAL A+EW +G +
Sbjct: 366 DTAGPEAALEAEEWVSGRD 384

Regulates leading edge dynamics and cell motility in fibroblasts. May be involved in cytokinesis and signal transduction.

Homo sapiens (taxid: 9606)

>sp|Q920M5|CORO6_MOUSE Coronin-6 OS=Mus musculus GN=Coro6 PE=2 SV=1

 Score =  407 bits (1046), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 185/319 (57%), Positives = 243/319 (76%), Gaps = 3/319 (0%)

Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV 209
            TGR++ ++ LV GH GPVLDI W PH+DNVIAS S+D  V VWQIPD    R +TEPV+
Sbjct: 66  KTGRVDKNYPLVTGHTGPVLDIDWCPHNDNVIASASDDTTVMVWQIPDYTPVRNITEPVI 125

Query: 210 DLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNW 268
            L  H +RVG++ WHPTA+NVLL+AG DN + IWNVGTGE+++ ++  HPD+++S  WN 
Sbjct: 126 TLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLDDIHPDVIHSVCWNS 185

Query: 269 DGSKLLTTCKDKKMRIINPR-TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQ 327
           +GS L TTCKDK +RII+PR +  + E A  HEG++  RA++   G + +TGFS+MSERQ
Sbjct: 186 NGSLLATTCKDKTLRIIDPRKSQVVAERARPHEGARPLRAVFTADGKLLSTGFSRMSERQ 245

Query: 328 YSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHY 387
            +L  P++ +EP+ + E+DTSNGV+ P YDPD+++VYLCGKGDS IRYFEIT EPPFVHY
Sbjct: 246 LALWDPNNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITEEPPFVHY 305

Query: 388 INTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYP 447
           +NTF + +PQRG+G MPKRG DV+ CEI RF++L+    C+ + MTVPRKS+LFQDDLYP
Sbjct: 306 LNTFSSKEPQRGMGFMPKRGLDVSKCEIARFYKLHERK-CEPIIMTVPRKSDLFQDDLYP 364

Query: 448 DTVGDTAALTADEWFAGNE 466
           DT G   AL ADEW +G +
Sbjct: 365 DTPGPEPALEADEWLSGQD 383

Mus musculus (taxid: 10090)

>sp|Q6QEF8|CORO6_HUMAN Coronin-6 OS=Homo sapiens GN=CORO6 PE=2 SV=2

 Score =  406 bits (1044), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 183/319 (57%), Positives = 243/319 (76%), Gaps = 3/319 (0%)

Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV 209
            TGR++ ++ LV GH  PVLDI W PH+DNVIAS S+D  + VWQIPD    R +TEP++
Sbjct: 66  KTGRVDKNYPLVTGHTAPVLDIDWCPHNDNVIASASDDTTIMVWQIPDYTPMRNITEPII 125

Query: 210 DLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNW 268
            L  H +RVG++ WHPTA+NVLL+AG DN + IWNVGTGE+++ ++  HPD+++S  WN 
Sbjct: 126 TLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLDDMHPDVIHSVCWNS 185

Query: 269 DGSKLLTTCKDKKMRIINPRTG-AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQ 327
           +GS L TTCKDK +RII+PR G  + E+A  HEG++  RA++   G + +TGFS+MSERQ
Sbjct: 186 NGSLLATTCKDKTLRIIDPRKGQVVAEQARPHEGARPLRAVFTADGKLLSTGFSRMSERQ 245

Query: 328 YSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHY 387
            +L  P++ +EP+ + E+DTSNGV+ P YDPD+++VYLCGKGDS IRYFEIT EPPFVHY
Sbjct: 246 LALWDPNNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITDEPPFVHY 305

Query: 388 INTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYP 447
           +NTF + +PQRG+G MPKRG DV+ CEI RF++L+    C+ + MTVPRKS+LFQDDLYP
Sbjct: 306 LNTFSSKEPQRGMGFMPKRGLDVSKCEIARFYKLHERK-CEPIIMTVPRKSDLFQDDLYP 364

Query: 448 DTVGDTAALTADEWFAGNE 466
           DT G   AL ADEW +G +
Sbjct: 365 DTPGPEPALEADEWLSGQD 383

Homo sapiens (taxid: 9606)

>sp|Q920J3|CORO6_RAT Coronin-6 OS=Rattus norvegicus GN=Coro6 PE=2 SV=2

 Score =  406 bits (1044), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 184/319 (57%), Positives = 242/319 (75%), Gaps = 3/319 (0%)

Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV 209
            TGR++ ++ LV GH GPVLDI W PH+DNVIAS S+D  V VWQIPD    R +TEPV+
Sbjct: 66  KTGRVDKNYPLVTGHTGPVLDIDWCPHNDNVIASASDDTTVMVWQIPDYTPVRNITEPVI 125

Query: 210 DLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNW 268
            L  H +RVG++ WHPTA+NVLL+AG DN + IWNVGTGE+++ ++  HPD+++S  WN 
Sbjct: 126 TLEGHSKRVGILSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLDDIHPDVIHSVCWNS 185

Query: 269 DGSKLLTTCKDKKMRIINPR-TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQ 327
           +GS L TTCKDK +RII+PR +  + E    HEG +  RA++ + G IFTTGF++MS+R+
Sbjct: 186 NGSLLATTCKDKTLRIIDPRKSQVVAERFAAHEGMRPMRAVFTRLGHIFTTGFTRMSQRE 245

Query: 328 YSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHY 387
             L  P++ +EP+ + E+DTSNGV+ P YDPD+++VYLCGKGDS IRYFEIT EPPFVHY
Sbjct: 246 LGLWDPNNFEEPVALQEMDTSNGVLLPFYDPDSSIVYLCGKGDSSIRYFEITDEPPFVHY 305

Query: 388 INTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYP 447
           +NTF + +PQRG+G MPKRG DV+ CEI RF++L+    C+ + MTVPRKS+LFQDDLYP
Sbjct: 306 LNTFSSKEPQRGMGFMPKRGLDVSKCEIARFYKLHERK-CEPIVMTVPRKSDLFQDDLYP 364

Query: 448 DTVGDTAALTADEWFAGNE 466
           DT G   AL ADEW +G +
Sbjct: 365 DTPGPEPALEADEWLSGQD 383

Rattus norvegicus (taxid: 10116)

>sp|Q9WUM3|COR1B_MOUSE Coronin-1B OS=Mus musculus GN=Coro1b PE=1 SV=1

 Score =  406 bits (1043), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 185/319 (57%), Positives = 243/319 (76%), Gaps = 3/319 (0%)

Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV 209
            TGRI+  +  V GH GPVLDI W PH+D VIASGSEDC V VWQIP+ G++  LTEPVV
Sbjct: 67  KTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLTEPVV 126

Query: 210 DLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-HPDIVYSASWNW 268
            L  H +RVG++ WHPTA+NVLL+AG DN V IWNVGT E + +++  HPD++Y+ SWN 
Sbjct: 127 VLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNVSWNH 186

Query: 269 DGSKLLTTCKDKKMRIINPRTGA-IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQ 327
           +GS   + CKDK +RII+PR G  + E    HEG++  RAI+L  G +FTTGFS+MSERQ
Sbjct: 187 NGSLFCSACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQ 246

Query: 328 YSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHY 387
            +L  P++L+EP+ + ELD+SNG + P YDPDT++VY+CGKGDS IRYFEIT EPP++H+
Sbjct: 247 LALWDPENLEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITDEPPYIHF 306

Query: 388 INTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYP 447
           +NTF + +PQRG+G MPKRG +V+ CEI RF++L+    C+ + MTVPRKS+LFQDDLYP
Sbjct: 307 LNTFTSKEPQRGMGSMPKRGLEVSKCEIARFYKLHERK-CEPIVMTVPRKSDLFQDDLYP 365

Query: 448 DTVGDTAALTADEWFAGNE 466
           DT G  AAL A++W +G +
Sbjct: 366 DTAGPEAALEAEDWVSGQD 384

Regulates leading edge dynamics and cell motility in fibroblasts. May be involved in cytokinesis and signal transduction.

Mus musculus (taxid: 10090)

>sp|O89046|COR1B_RAT Coronin-1B OS=Rattus norvegicus GN=Coro1b PE=1 SV=1

 Score =  403 bits (1036), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 184/319 (57%), Positives = 241/319 (75%), Gaps = 3/319 (0%)

Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV 209
            TGRI+  +  V GH GPVLDI W PH+D VIASGSEDC V VWQIP+ G++  LTEPVV
Sbjct: 67  KTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTVMVWQIPENGLTSPLTEPVV 126

Query: 210 DLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-HPDIVYSASWNW 268
            L  H +RVG++ WHPTA+NVLL+AG DN V IWNVGT E + +++  HPD++Y+ SWN 
Sbjct: 127 VLEGHTKRVGIITWHPTARNVLLSAGCDNVVLIWNVGTAEELYRLDSLHPDLIYNVSWNH 186

Query: 269 DGSKLLTTCKDKKMRIINPRTGA-IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQ 327
           +GS   T CKDK +RII+PR G  + E    HEG++  RAI+L  G +FT GFS+MSERQ
Sbjct: 187 NGSLFCTACKDKSVRIIDPRRGTLVAEREKAHEGARPMRAIFLADGKVFTAGFSRMSERQ 246

Query: 328 YSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHY 387
            +L  P++ +EP+ + ELD+SNG + P YDPDT++VY+CGKGDS IRYFEIT EPP++H+
Sbjct: 247 LALWDPENFEEPMALQELDSSNGALLPFYDPDTSVVYVCGKGDSSIRYFEITDEPPYIHF 306

Query: 388 INTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYP 447
           +NTF + +PQRG+G MPKRG +V+ CEI RF++L+    C+ + MTVPRKS+LFQDDLYP
Sbjct: 307 LNTFTSKEPQRGMGSMPKRGLEVSKCEIARFYKLHERK-CEPIVMTVPRKSDLFQDDLYP 365

Query: 448 DTVGDTAALTADEWFAGNE 466
           DT G  AAL A++W +G +
Sbjct: 366 DTAGPDAALEAEDWVSGQD 384

Regulates leading edge dynamics and cell motility in fibroblasts. May be involved in cytokinesis and signal transduction.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	490
189238186	488	PREDICTED: similar to GA21791-PA [Tribol	0.540	0.543	0.853	1e-166
156549506	494	PREDICTED: coronin-6-like isoform 1 [Nas	0.546	0.542	0.858	1e-165
321471795	550	hypothetical protein DAPPUDRAFT_316476 [	0.642	0.572	0.853	1e-165
322795836	544	hypothetical protein SINV_14713 [Solenop	0.551	0.496	0.851	1e-164
332028757	497	Coronin-6 [Acromyrmex echinatior]	0.548	0.541	0.845	1e-163
307212067	492	Coronin-6 [Harpegnathos saltator]	0.551	0.548	0.839	1e-163
380020482	494	PREDICTED: coronin-1C-like [Apis florea]	0.510	0.506	0.846	1e-161
66529238	494	PREDICTED: coronin-1C-like isoform 1 [Ap	0.512	0.508	0.843	1e-161
340726722	494	PREDICTED: coronin-1C-like [Bombus terre	0.546	0.542	0.838	1e-161
350424644	494	PREDICTED: coronin-1C-like [Bombus impat	0.546	0.542	0.838	1e-161

>gi|189238186|ref|XP_966734.2| PREDICTED: similar to GA21791-PA [Tribolium castaneum] gi|270008836|gb|EFA05284.1| hypothetical protein TcasGA2_TC015441 [Tribolium castaneum]

 Score =  590 bits (1521), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 269/315 (85%), Positives = 294/315 (93%)

Query: 152 GRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDL 211
           GR+ ADH LVGGHKGPVLDIAW PH+DNVIASGSEDCVVKVW IPDGG+ +TLTEPVVDL
Sbjct: 68  GRLAADHPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWHIPDGGLIKTLTEPVVDL 127

Query: 212 LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS 271
           +YHQRRVGLVLWHPTA NVLLTAGSDN V IWNVGTGE +++I+CHPDIVYSA +NWDGS
Sbjct: 128 IYHQRRVGLVLWHPTALNVLLTAGSDNQVVIWNVGTGEALVKIDCHPDIVYSACFNWDGS 187

Query: 272 KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLR 331
           +LLTTCKDKK+RIINPRTG +E EAVCHEGSKATRAI+L+ GL+FTTGFSKMSERQYSLR
Sbjct: 188 QLLTTCKDKKIRIINPRTGEVESEAVCHEGSKATRAIFLRHGLVFTTGFSKMSERQYSLR 247

Query: 332 APDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF 391
            PD L+EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF
Sbjct: 248 TPDALNEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF 307

Query: 392 QTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTVG 451
           QTPDPQRGIGMMPKRGCDV SCEI RF+RLNNSGLCQV++MTVPRKSELFQ+DLYPDT+G
Sbjct: 308 QTPDPQRGIGMMPKRGCDVTSCEISRFYRLNNSGLCQVITMTVPRKSELFQEDLYPDTLG 367

Query: 452 DTAALTADEWFAGNE 466
           D+ ALTA+EW  G +
Sbjct: 368 DSPALTAEEWVEGKD 382

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156549506|ref|XP_001604802.1| PREDICTED: coronin-6-like isoform 1 [Nasonia vitripennis] gi|345487367|ref|XP_003425682.1| PREDICTED: coronin-6-like isoform 2 [Nasonia vitripennis]

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 272/317 (85%), Positives = 291/317 (91%)

Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV 209
             GRI+ADH LVGGHKGPVLDIAW PH+DNVIASGSEDCVVKVWQIPDGGISRTLTE VV
Sbjct: 66  KVGRISADHPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGISRTLTESVV 125

Query: 210 DLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWD 269
           DL  HQRRVGLVLWHPTA NVLLTAGSDN V IWNVGTGE +++I+CHPD+VYSA WNWD
Sbjct: 126 DLQLHQRRVGLVLWHPTALNVLLTAGSDNLVIIWNVGTGEAVVKIDCHPDVVYSACWNWD 185

Query: 270 GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYS 329
           GS L+TTCKDKK+RII PRTG I EEA+ HEGSKATRAI+L+ GLIFTTGFSKMSERQYS
Sbjct: 186 GSSLVTTCKDKKIRIIEPRTGKIVEEAIAHEGSKATRAIFLRGGLIFTTGFSKMSERQYS 245

Query: 330 LRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYIN 389
           LRAPD L EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT EPPFVHYIN
Sbjct: 246 LRAPDMLAEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITPEPPFVHYIN 305

Query: 390 TFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDT 449
           TFQTPDPQRGIGMMPKRGCDVNSCEI RF+RLNNSG CQV+SMTVPRKSELFQ+DLYPDT
Sbjct: 306 TFQTPDPQRGIGMMPKRGCDVNSCEISRFYRLNNSGFCQVISMTVPRKSELFQEDLYPDT 365

Query: 450 VGDTAALTADEWFAGNE 466
            GDTAA+TA++W AG +
Sbjct: 366 PGDTAAITAEDWEAGKD 382

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321471795|gb|EFX82767.1| hypothetical protein DAPPUDRAFT_316476 [Daphnia pulex]

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 269/315 (85%), Positives = 292/315 (92%)

Query: 152 GRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDL 211
           GRIN DH LVGGHKGPVLDIAW PH+DNVIASGSEDCVVKVWQ+PD G+SRTLTEPVV+L
Sbjct: 68  GRINPDHPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQVPDHGLSRTLTEPVVEL 127

Query: 212 LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS 271
           LYHQRRVGLVLWHPTAQNVLLTAGSDN V IWNVGTGE  + I+ HPD+VYSA WNW+GS
Sbjct: 128 LYHQRRVGLVLWHPTAQNVLLTAGSDNLVVIWNVGTGEPTVVIDSHPDLVYSACWNWEGS 187

Query: 272 KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLR 331
           KLLTTCKDKK+RII+PR G ++EEA+CHEGSKATRAIYL++GL+FTTGFSKMSERQYSLR
Sbjct: 188 KLLTTCKDKKIRIIDPRNGNVDEEAICHEGSKATRAIYLRNGLVFTTGFSKMSERQYSLR 247

Query: 332 APDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF 391
           AP HL++PIVMVELDTSNGVMFPLYD DTN+VYLCGKGDSVIRYFEIT EPPFVHYINTF
Sbjct: 248 APGHLNDPIVMVELDTSNGVMFPLYDADTNMVYLCGKGDSVIRYFEITPEPPFVHYINTF 307

Query: 392 QTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTVG 451
           QTPDPQRGIGMMPKRG DV SCEI RFFRLNNSGLCQVVSMTVPRKSELFQ+DLYPDT G
Sbjct: 308 QTPDPQRGIGMMPKRGVDVTSCEITRFFRLNNSGLCQVVSMTVPRKSELFQEDLYPDTPG 367

Query: 452 DTAALTADEWFAGNE 466
           D  AL+A+EWFAG +
Sbjct: 368 DVPALSAEEWFAGKD 382

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322795836|gb|EFZ18515.1| hypothetical protein SINV_14713 [Solenopsis invicta]

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 270/317 (85%), Positives = 293/317 (92%)

Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV 209
             GRI+AD+ LVGGHKGPVLDIAW PH+DNVIASGSEDCVVKVWQIPDGGISRTLTE +V
Sbjct: 115 KVGRISADYPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGISRTLTESIV 174

Query: 210 DLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWD 269
           DL  HQRRVGLVLWHPTA NVLLTAGSDN V IWNVGTGE +++IECHPD+VYSA WNWD
Sbjct: 175 DLQLHQRRVGLVLWHPTALNVLLTAGSDNLVIIWNVGTGEALMRIECHPDVVYSACWNWD 234

Query: 270 GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYS 329
           GS+L+TTCKDKK+RI++PR+G I EEA+ HEGSKATRAI+L+ GLIFTTGFSKMSERQYS
Sbjct: 235 GSRLVTTCKDKKIRILDPRSGEILEEAIAHEGSKATRAIFLRGGLIFTTGFSKMSERQYS 294

Query: 330 LRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYIN 389
           LRAPD L EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT EPPFVHYIN
Sbjct: 295 LRAPDMLGEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITPEPPFVHYIN 354

Query: 390 TFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDT 449
           TFQTPDPQRGIGMMPKRGCDVNSCEI RF+RLNNSG CQVVSMTVPRKSELFQ+DLYPDT
Sbjct: 355 TFQTPDPQRGIGMMPKRGCDVNSCEITRFYRLNNSGFCQVVSMTVPRKSELFQEDLYPDT 414

Query: 450 VGDTAALTADEWFAGNE 466
            GDTAA++A+EW AG +
Sbjct: 415 PGDTAAISAEEWQAGTD 431

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332028757|gb|EGI68788.1| Coronin-6 [Acromyrmex echinatior]

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 268/317 (84%), Positives = 291/317 (91%)

Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV 209
             GRI AD+ LVGGHKGPVLDIAW PH+DNVIASGSEDCVVKVWQIPDGGISRTLTE +V
Sbjct: 66  KVGRIPADYPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGISRTLTESIV 125

Query: 210 DLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWD 269
           DL  HQRRVGLVLWHP+A NVLLTAGSDN V IWNVGTGE +++I+CHPD+VYSA WNWD
Sbjct: 126 DLQLHQRRVGLVLWHPSALNVLLTAGSDNLVIIWNVGTGEALMRIDCHPDVVYSACWNWD 185

Query: 270 GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYS 329
           GS+L+TTCKDKK+RI+NPR+G I EEA+ HEGSKATRAI+L+ GLIFTTGFSKMSERQYS
Sbjct: 186 GSRLVTTCKDKKIRILNPRSGEILEEAIAHEGSKATRAIFLRGGLIFTTGFSKMSERQYS 245

Query: 330 LRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYIN 389
           LRAPD L EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT EPPFVHYIN
Sbjct: 246 LRAPDMLGEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITPEPPFVHYIN 305

Query: 390 TFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDT 449
           TFQTPDPQRGIGMMPKRGCDVNSCEI RF+RLNNSG CQVVSMTVPRKSELFQ+DLYPDT
Sbjct: 306 TFQTPDPQRGIGMMPKRGCDVNSCEITRFYRLNNSGFCQVVSMTVPRKSELFQEDLYPDT 365

Query: 450 VGDTAALTADEWFAGNE 466
            GDTAA++A+EW  G +
Sbjct: 366 AGDTAAISAEEWEGGTD 382

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307212067|gb|EFN87950.1| Coronin-6 [Harpegnathos saltator]

 Score =  579 bits (1493), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 266/317 (83%), Positives = 292/317 (92%)

Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV 209
             GRI AD+ LVGGHKGPVLDIAW PH+DNVIASGSEDCVVK+WQIPDGGISRTLTE +V
Sbjct: 66  KVGRIPADYPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKIWQIPDGGISRTLTESIV 125

Query: 210 DLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWD 269
           DL  HQRRVGLVLWHP+A NVLLTAGSDN V IWNVGTGE +++I+CHPD+VYSA WNWD
Sbjct: 126 DLQLHQRRVGLVLWHPSALNVLLTAGSDNLVIIWNVGTGEALVRIDCHPDVVYSACWNWD 185

Query: 270 GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYS 329
           GS+++TTCKDK++RI++PR+G I EEAV HEGSKATRAI+L+ GLIFTTGFSKMSERQYS
Sbjct: 186 GSRIVTTCKDKRIRILDPRSGEILEEAVAHEGSKATRAIFLRGGLIFTTGFSKMSERQYS 245

Query: 330 LRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYIN 389
           LRAPD L EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT EPPFVHYIN
Sbjct: 246 LRAPDMLGEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITPEPPFVHYIN 305

Query: 390 TFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDT 449
           TFQTPDPQRGIGMMPKRGCDVNSCEI RF+RLNNSG CQVVSMTVPRKSELFQ+DLYPDT
Sbjct: 306 TFQTPDPQRGIGMMPKRGCDVNSCEITRFYRLNNSGFCQVVSMTVPRKSELFQEDLYPDT 365

Query: 450 VGDTAALTADEWFAGNE 466
            GDTAA++A+EW AG +
Sbjct: 366 PGDTAAISAEEWEAGTD 382

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380020482|ref|XP_003694112.1| PREDICTED: coronin-1C-like [Apis florea]

 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 265/313 (84%), Positives = 289/313 (92%)

Query: 152 GRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDL 211
           GRI AD+ LVGGHKGPVLDIAW PH+DNVIASGSEDCVVKVWQIPDGGISRTLTE VVDL
Sbjct: 68  GRIPADYPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGISRTLTESVVDL 127

Query: 212 LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS 271
             HQRRVGLVLWHP+A N+LLTAGSDN V IWNVGTGE +++I+CHPD++YSA WNWDGS
Sbjct: 128 QLHQRRVGLVLWHPSALNILLTAGSDNLVLIWNVGTGEAVVRIDCHPDMIYSACWNWDGS 187

Query: 272 KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLR 331
           K++TTCKDKK+RI++PR G I EEA+ HEGSKATRAI+L+ GLIFTTGFSKMSERQYSLR
Sbjct: 188 KVVTTCKDKKIRILDPRNGEILEEAIAHEGSKATRAIFLRGGLIFTTGFSKMSERQYSLR 247

Query: 332 APDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF 391
           APD L EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT EPPFVHYINTF
Sbjct: 248 APDMLGEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITPEPPFVHYINTF 307

Query: 392 QTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTVG 451
           QTPDPQRGIGMMPKRGCDVNSCEI RF+RLNNSG CQV+SMTVPRKSELFQ+DLYPDT G
Sbjct: 308 QTPDPQRGIGMMPKRGCDVNSCEITRFYRLNNSGFCQVISMTVPRKSELFQEDLYPDTPG 367

Query: 452 DTAALTADEWFAG 464
           DTAA++A+EW  G
Sbjct: 368 DTAAISAEEWENG 380

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66529238|ref|XP_395546.2| PREDICTED: coronin-1C-like isoform 1 [Apis mellifera]

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 265/314 (84%), Positives = 289/314 (92%)

Query: 151 TGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD 210
            GRI AD+ LVGGHKGPVLDIAW PH+DNVIASGSEDCVVKVWQIPDGGISRTLTE VVD
Sbjct: 67  VGRIPADYPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGISRTLTESVVD 126

Query: 211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG 270
           L  HQRRVGLVLWHP+A N+LLTAGSDN V IWNVGTGE +++I+CHPD++YSA WNWDG
Sbjct: 127 LQLHQRRVGLVLWHPSALNILLTAGSDNLVLIWNVGTGEAIVRIDCHPDMIYSACWNWDG 186

Query: 271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSL 330
           SK++TTCKDKK+RI++PR G I EEA+ HEGSKATRAI+L+ GLIFTTGFSKMSERQYSL
Sbjct: 187 SKVVTTCKDKKIRILDPRNGEILEEAIAHEGSKATRAIFLRGGLIFTTGFSKMSERQYSL 246

Query: 331 RAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT 390
           RAPD L EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT EPPFVHYINT
Sbjct: 247 RAPDMLGEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITPEPPFVHYINT 306

Query: 391 FQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTV 450
           FQTPDPQRGIGMMPKRGCDVNSCEI RF+RLNNSG CQV+SMTVPRKSELFQ+DLYPDT 
Sbjct: 307 FQTPDPQRGIGMMPKRGCDVNSCEITRFYRLNNSGFCQVISMTVPRKSELFQEDLYPDTP 366

Query: 451 GDTAALTADEWFAG 464
           GDTAA++A+EW  G
Sbjct: 367 GDTAAISAEEWENG 380

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340726722|ref|XP_003401702.1| PREDICTED: coronin-1C-like [Bombus terrestris]

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 264/315 (83%), Positives = 290/315 (92%)

Query: 152 GRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDL 211
           GRI AD+ LVGGHKGPVLDIAW PH+DN+IASGSEDCVVKVWQIPDGGISRTLTE VVDL
Sbjct: 68  GRIPADYPLVGGHKGPVLDIAWCPHNDNIIASGSEDCVVKVWQIPDGGISRTLTESVVDL 127

Query: 212 LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS 271
             HQRRVGLVLWHPTA N+LLTAGSDN V IWNVGTGE +++I+CHPD++YSA WNWDGS
Sbjct: 128 QLHQRRVGLVLWHPTALNILLTAGSDNLVLIWNVGTGEAIVRIDCHPDMIYSACWNWDGS 187

Query: 272 KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLR 331
           +++TTCKDKK+RI++PRTG I EEA+ HEGSKATRAI+L+ GLIFTTGFSKMSERQYSLR
Sbjct: 188 RVVTTCKDKKIRILDPRTGEILEEAIAHEGSKATRAIFLRGGLIFTTGFSKMSERQYSLR 247

Query: 332 APDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF 391
           APD L EPIVMVELDTSNGVMFPLYD DTNLVYLCGKGDSVIRYFEIT EPPFVHYINTF
Sbjct: 248 APDMLGEPIVMVELDTSNGVMFPLYDSDTNLVYLCGKGDSVIRYFEITPEPPFVHYINTF 307

Query: 392 QTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTVG 451
           QTPDPQRGIGMMPKRGCDVNSCEI RF+RLNNSG CQV+SMTVPRKSELFQ+DLYPDT G
Sbjct: 308 QTPDPQRGIGMMPKRGCDVNSCEITRFYRLNNSGFCQVISMTVPRKSELFQEDLYPDTPG 367

Query: 452 DTAALTADEWFAGNE 466
           DTAA++A+EW  G +
Sbjct: 368 DTAAISAEEWENGTD 382

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350424644|ref|XP_003493864.1| PREDICTED: coronin-1C-like [Bombus impatiens]

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 264/315 (83%), Positives = 290/315 (92%)

Query: 152 GRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDL 211
           GRI AD+ LVGGHKGPVLDIAW PH+DN+IASGSEDCVVKVWQIPDGGISRTLTE VVDL
Sbjct: 68  GRIPADYPLVGGHKGPVLDIAWCPHNDNIIASGSEDCVVKVWQIPDGGISRTLTESVVDL 127

Query: 212 LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS 271
             HQRRVGLVLWHPTA N+LLTAGSDN V IWNVGTGE +++I+CHPD++YSA WNWDGS
Sbjct: 128 QLHQRRVGLVLWHPTALNILLTAGSDNLVLIWNVGTGEAIVRIDCHPDMIYSACWNWDGS 187

Query: 272 KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLR 331
           +++TTCKDKK+RI++PRTG I EEA+ HEGSKATRAI+L+ GLIFTTGFSKMSERQYSLR
Sbjct: 188 RVVTTCKDKKIRILDPRTGEILEEAIAHEGSKATRAIFLRGGLIFTTGFSKMSERQYSLR 247

Query: 332 APDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF 391
           APD L EPIVMVELDTSNGVMFPLYD DTNLVYLCGKGDSVIRYFEIT EPPFVHYINTF
Sbjct: 248 APDMLGEPIVMVELDTSNGVMFPLYDSDTNLVYLCGKGDSVIRYFEITPEPPFVHYINTF 307

Query: 392 QTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTVG 451
           QTPDPQRGIGMMPKRGCDVNSCEI RF+RLNNSG CQV+SMTVPRKSELFQ+DLYPDT G
Sbjct: 308 QTPDPQRGIGMMPKRGCDVNSCEITRFYRLNNSGFCQVISMTVPRKSELFQEDLYPDTPG 367

Query: 452 DTAALTADEWFAGNE 466
           DTAA++A+EW  G +
Sbjct: 368 DTAAISAEEWENGTD 382

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	490
FB|FBgn0033109	528	coro "coro" [Drosophila melano	0.642	0.596	0.796	1e-152
ZFIN|ZDB-GENE-030114-6	474	coro1ca "coronin, actin bindin	0.638	0.660	0.626	6.8e-117
UNIPROTKB|F1NXA5	475	CORO1C "Coronin" [Gallus gallu	0.638	0.658	0.620	2.9e-116
UNIPROTKB|Q5ZI60	474	CORO1C "Coronin" [Gallus gallu	0.638	0.660	0.620	2.9e-116
UNIPROTKB|A2VDN8	474	CORO1C "Coronin" [Bos taurus (	0.638	0.660	0.610	2e-115
UNIPROTKB|G3MWI5	524	CORO1C "Coronin" [Bos taurus (	0.638	0.597	0.610	2e-115
UNIPROTKB|A7MAP0	480	CORO1C "Coronin" [Homo sapiens	0.638	0.652	0.610	3.3e-115
UNIPROTKB|A7MAP1	527	CORO1C "Coronin" [Homo sapiens	0.638	0.593	0.610	3.3e-115
UNIPROTKB|Q9ULV4	474	CORO1C "Coronin-1C" [Homo sapi	0.638	0.660	0.610	3.3e-115
UNIPROTKB|F1Q1F6	474	CORO1C "Coronin" [Canis lupus	0.638	0.660	0.610	3.3e-115

FB|FBgn0033109 coro "coro" [Drosophila melanogaster (taxid:7227)]

 Score = 1417 (503.9 bits), Expect = 1.0e-152, Sum P(2) = 1.0e-152
 Identities = 251/315 (79%), Positives = 289/315 (91%)

Query:   152 GRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDL 211
             GRI ADH LVGGHKGPVLDIAW PH+DNVIASGSEDCVVKVWQIPDGG+SRTLTEPVVDL
Sbjct:    68 GRIAADHPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGLSRTLTEPVVDL 127

Query:   212 LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS 271
             ++HQRRVGLVLWHP+A NVLLTAGSDN V IWNVGTGEI++ I+ HPDIVYSA +NWDGS
Sbjct:   128 VFHQRRVGLVLWHPSALNVLLTAGSDNQVVIWNVGTGEILVHIDSHPDIVYSACFNWDGS 187

Query:   272 KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLR 331
             KL+TTCKDKK+RI +PRT  +E EA+CHEGSKATRAI+L+ GLIFTTGF++ SERQYSLR
Sbjct:   188 KLVTTCKDKKIRIYDPRTAELESEAMCHEGSKATRAIFLRHGLIFTTGFNRSSERQYSLR 247

Query:   332 APDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF 391
             APD L+EPIVMVELDTSNGVMFPLYD DTN++YLCGKGDSVIRYFE+T EPPFVHYINTF
Sbjct:   248 APDALNEPIVMVELDTSNGVMFPLYDADTNMIYLCGKGDSVIRYFEVTPEPPFVHYINTF 307

Query:   392 QTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTVG 451
             QT +PQRGIG+MPKRGCDV +CE+ +F+R+NN+GLCQV+SMTVPRKS+LFQ+DLYPDT+ 
Sbjct:   308 QTTEPQRGIGLMPKRGCDVTTCEVAKFYRMNNNGLCQVISMTVPRKSDLFQEDLYPDTLA 367

Query:   452 DTAALTADEWFAGNE 466
             + AA+TA+EW  G +
Sbjct:   368 EDAAITAEEWIDGKD 382

GO:0003779 "actin binding" evidence=ISS

GO:0015629 "actin cytoskeleton" evidence=IBA;NAS

GO:0007527 "adult somatic muscle development" evidence=IMP

GO:0072686 "mitotic spindle" evidence=IDA

GO:0051015 "actin filament binding" evidence=IBA

GO:0030036 "actin cytoskeleton organization" evidence=IBA

ZFIN|ZDB-GENE-030114-6 coro1ca "coronin, actin binding protein, 1Ca" [Danio rerio (taxid:7955)]

 Score = 1075 (383.5 bits), Expect = 6.8e-117, Sum P(2) = 6.8e-117
 Identities = 198/316 (62%), Positives = 243/316 (76%)

Query:   151 TGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD 210
             TGRI+  +  V GH GPVLDI W PH+D VIASGSEDC V VWQIP+ G+  +++EPVV 
Sbjct:    67 TGRIDKAYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLVTSMSEPVVV 126

Query:   211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH-PDIVYSASWNWD 269
             L  H +RVG+V WHPTA+NVLL+AG DN + IWNVGTGE MI +E H PDI+YS  WN +
Sbjct:   127 LEGHSKRVGVVTWHPTARNVLLSAGCDNMIIIWNVGTGESMITLEDHHPDIIYSVCWNRN 186

Query:   270 GSKLLTTCKDKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQY 328
             GS + T CKDKK+R+I+PR   I  E+   HEG++  RAI+L  G +FTTGFS+MSERQ 
Sbjct:   187 GSLICTACKDKKIRVIDPRKEEIIAEKDKAHEGARPMRAIFLSDGKVFTTGFSRMSERQL 246

Query:   329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI 388
             +L  P+++DEP+ + E+DTSNGV+ P YDPDTN+VYLCGKGDS IRYFEIT E PFVHY+
Sbjct:   247 ALWDPENIDEPVAVHEMDTSNGVLLPFYDPDTNVVYLCGKGDSSIRYFEITDEAPFVHYL 306

Query:   389 NTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPD 448
             NTF T +PQRG+G MPKRG DVN CEI RF++L+    C+ + MTVPRKS+LFQDDLYPD
Sbjct:   307 NTFTTKEPQRGMGYMPKRGLDVNKCEIARFYKLHERK-CEPIIMTVPRKSDLFQDDLYPD 365

Query:   449 TVGDTAALTADEWFAG 464
             T G  A L A+EWF G
Sbjct:   366 TAGPDAPLEAEEWFEG 381

GO:0051015 "actin filament binding" evidence=IBA

GO:0030036 "actin cytoskeleton organization" evidence=IBA

GO:0015629 "actin cytoskeleton" evidence=IBA

UNIPROTKB|F1NXA5 CORO1C "Coronin" [Gallus gallus (taxid:9031)]

 Score = 1064 (379.6 bits), Expect = 2.9e-116, Sum P(2) = 2.9e-116
 Identities = 196/316 (62%), Positives = 243/316 (76%)

Query:   151 TGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD 210
             TGRI+  +  V GH GPVLDI W PH+D VIASGSEDC V VWQIP+ G++ +LTEPVV 
Sbjct:    67 TGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVV 126

Query:   211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWD 269
             L  H +RVG+V WHPTA+NVLL+AG DN + IWNVGTGE +I ++  H D++Y+ SWN +
Sbjct:   127 LEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHVDVIYNVSWNRN 186

Query:   270 GSKLLTTCKDKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQY 328
             GS + T  KDKK+RII+PR   I  E+   HEG++  RAI+L  G IFTTGFS+MSERQ 
Sbjct:   187 GSLICTASKDKKVRIIDPRKQEIIAEKEKTHEGARPMRAIFLADGNIFTTGFSRMSERQL 246

Query:   329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI 388
             +L  P +++EPI + E+DTSNGV+ P YDPDTN++YLCGKGDS IRYFEIT E P+VHY+
Sbjct:   247 ALWNPKNMEEPIALHEMDTSNGVLLPFYDPDTNIIYLCGKGDSSIRYFEITDESPYVHYL 306

Query:   389 NTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPD 448
             NTF + +PQRG+G MPKRG DVN CEI RFF+L+    C+ + MTVPRKS+LFQDDLYPD
Sbjct:   307 NTFSSKEPQRGMGFMPKRGLDVNKCEIARFFKLHERK-CEPIIMTVPRKSDLFQDDLYPD 365

Query:   449 TVGDTAALTADEWFAG 464
             T G  AAL A+EWF G
Sbjct:   366 TAGPEAALEAEEWFEG 381

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0051015 "actin filament binding" evidence=IEA

UNIPROTKB|Q5ZI60 CORO1C "Coronin" [Gallus gallus (taxid:9031)]

 Score = 1064 (379.6 bits), Expect = 2.9e-116, Sum P(2) = 2.9e-116
 Identities = 196/316 (62%), Positives = 243/316 (76%)

Query:   151 TGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD 210
             TGRI+  +  V GH GPVLDI W PH+D VIASGSEDC V VWQIP+ G++ +LTEPVV 
Sbjct:    66 TGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVV 125

Query:   211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWD 269
             L  H +RVG+V WHPTA+NVLL+AG DN + IWNVGTGE +I ++  H D++Y+ SWN +
Sbjct:   126 LEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHVDVIYNVSWNRN 185

Query:   270 GSKLLTTCKDKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQY 328
             GS + T  KDKK+RII+PR   I  E+   HEG++  RAI+L  G IFTTGFS+MSERQ 
Sbjct:   186 GSLICTASKDKKVRIIDPRKQEIIAEKEKTHEGARPMRAIFLADGNIFTTGFSRMSERQL 245

Query:   329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI 388
             +L  P +++EPI + E+DTSNGV+ P YDPDTN++YLCGKGDS IRYFEIT E P+VHY+
Sbjct:   246 ALWNPKNMEEPIALHEMDTSNGVLLPFYDPDTNIIYLCGKGDSSIRYFEITDESPYVHYL 305

Query:   389 NTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPD 448
             NTF + +PQRG+G MPKRG DVN CEI RFF+L+    C+ + MTVPRKS+LFQDDLYPD
Sbjct:   306 NTFSSKEPQRGMGFMPKRGLDVNKCEIARFFKLHERK-CEPIIMTVPRKSDLFQDDLYPD 364

Query:   449 TVGDTAALTADEWFAG 464
             T G  AAL A+EWF G
Sbjct:   365 TAGPEAALEAEEWFEG 380

GO:0015629 "actin cytoskeleton" evidence=IBA

GO:0030036 "actin cytoskeleton organization" evidence=IBA

GO:0051015 "actin filament binding" evidence=IBA

UNIPROTKB|A2VDN8 CORO1C "Coronin" [Bos taurus (taxid:9913)]

 Score = 1056 (376.8 bits), Expect = 2.0e-115, Sum P(2) = 2.0e-115
 Identities = 193/316 (61%), Positives = 243/316 (76%)

Query:   151 TGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD 210
             TGRI+  +  V GH GPVLDI W PH+D VIASGSEDC V VWQIP+ G++ +LTEPVV 
Sbjct:    66 TGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVI 125

Query:   211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWD 269
             L  H +RVG+V WHPTA+NVLL+AG DN + IWNVGTGE +I ++  H D++Y+ SWN +
Sbjct:   126 LEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWNRN 185

Query:   270 GSKLLTTCKDKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQY 328
             GS + T  KDKK+R+I+PR   I  E+   HEG++  RAI+L  G +FTTGFS+MSERQ 
Sbjct:   186 GSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQL 245

Query:   329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI 388
             +L  P +++EPI + E+DTSNGV+ P YDPDT+++YLCGKGDS IRYFEIT E P+VHY+
Sbjct:   246 ALWNPKNMEEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPYVHYL 305

Query:   389 NTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPD 448
             NTF + +PQRG+G MPKRG DVN CEI RFF+L+    C+ + MTVPRKS+LFQDDLYPD
Sbjct:   306 NTFSSKEPQRGMGYMPKRGLDVNKCEIARFFKLHERK-CEPIIMTVPRKSDLFQDDLYPD 364

Query:   449 TVGDTAALTADEWFAG 464
             T G  AAL A+EWF G
Sbjct:   365 TAGPEAALEAEEWFEG 380

GO:0051015 "actin filament binding" evidence=ISS

GO:0030036 "actin cytoskeleton organization" evidence=ISS

GO:0015629 "actin cytoskeleton" evidence=ISS

UNIPROTKB|G3MWI5 CORO1C "Coronin" [Bos taurus (taxid:9913)]

 Score = 1056 (376.8 bits), Expect = 2.0e-115, Sum P(2) = 2.0e-115
 Identities = 193/316 (61%), Positives = 243/316 (76%)

Query:   151 TGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD 210
             TGRI+  +  V GH GPVLDI W PH+D VIASGSEDC V VWQIP+ G++ +LTEPVV 
Sbjct:   116 TGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVI 175

Query:   211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWD 269
             L  H +RVG+V WHPTA+NVLL+AG DN + IWNVGTGE +I ++  H D++Y+ SWN +
Sbjct:   176 LEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWNRN 235

Query:   270 GSKLLTTCKDKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQY 328
             GS + T  KDKK+R+I+PR   I  E+   HEG++  RAI+L  G +FTTGFS+MSERQ 
Sbjct:   236 GSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQL 295

Query:   329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI 388
             +L  P +++EPI + E+DTSNGV+ P YDPDT+++YLCGKGDS IRYFEIT E P+VHY+
Sbjct:   296 ALWNPKNMEEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPYVHYL 355

Query:   389 NTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPD 448
             NTF + +PQRG+G MPKRG DVN CEI RFF+L+    C+ + MTVPRKS+LFQDDLYPD
Sbjct:   356 NTFSSKEPQRGMGYMPKRGLDVNKCEIARFFKLHERK-CEPIIMTVPRKSDLFQDDLYPD 414

Query:   449 TVGDTAALTADEWFAG 464
             T G  AAL A+EWF G
Sbjct:   415 TAGPEAALEAEEWFEG 430

GO:0051015 "actin filament binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

UNIPROTKB|A7MAP0 CORO1C "Coronin" [Homo sapiens (taxid:9606)]

 Score = 1054 (376.1 bits), Expect = 3.3e-115, Sum P(2) = 3.3e-115
 Identities = 193/316 (61%), Positives = 242/316 (76%)

Query:   151 TGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD 210
             TGRI+  +  V GH GPVLDI W PH+D VIASGSEDC V VWQIP+ G++ +LTEPVV 
Sbjct:    72 TGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVI 131

Query:   211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWD 269
             L  H +RVG+V WHPTA+NVLL+AG DN + IWNVGTGE +I ++  H D++Y+ SWN +
Sbjct:   132 LEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWNRN 191

Query:   270 GSKLLTTCKDKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQY 328
             GS + T  KDKK+R+I+PR   I  E+   HEG++  RAI+L  G +FTTGFS+MSERQ 
Sbjct:   192 GSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQL 251

Query:   329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI 388
             +L  P ++ EPI + E+DTSNGV+ P YDPDT+++YLCGKGDS IRYFEIT E P+VHY+
Sbjct:   252 ALWNPKNMQEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPYVHYL 311

Query:   389 NTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPD 448
             NTF + +PQRG+G MPKRG DVN CEI RFF+L+    C+ + MTVPRKS+LFQDDLYPD
Sbjct:   312 NTFSSKEPQRGMGYMPKRGLDVNKCEIARFFKLHERK-CEPIIMTVPRKSDLFQDDLYPD 370

Query:   449 TVGDTAALTADEWFAG 464
             T G  AAL A+EWF G
Sbjct:   371 TAGPEAALEAEEWFEG 386

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0051015 "actin filament binding" evidence=IEA

UNIPROTKB|A7MAP1 CORO1C "Coronin" [Homo sapiens (taxid:9606)]

 Score = 1054 (376.1 bits), Expect = 3.3e-115, Sum P(2) = 3.3e-115
 Identities = 193/316 (61%), Positives = 242/316 (76%)

Query:   151 TGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD 210
             TGRI+  +  V GH GPVLDI W PH+D VIASGSEDC V VWQIP+ G++ +LTEPVV 
Sbjct:   119 TGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVI 178

Query:   211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWD 269
             L  H +RVG+V WHPTA+NVLL+AG DN + IWNVGTGE +I ++  H D++Y+ SWN +
Sbjct:   179 LEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWNRN 238

Query:   270 GSKLLTTCKDKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQY 328
             GS + T  KDKK+R+I+PR   I  E+   HEG++  RAI+L  G +FTTGFS+MSERQ 
Sbjct:   239 GSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQL 298

Query:   329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI 388
             +L  P ++ EPI + E+DTSNGV+ P YDPDT+++YLCGKGDS IRYFEIT E P+VHY+
Sbjct:   299 ALWNPKNMQEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPYVHYL 358

Query:   389 NTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPD 448
             NTF + +PQRG+G MPKRG DVN CEI RFF+L+    C+ + MTVPRKS+LFQDDLYPD
Sbjct:   359 NTFSSKEPQRGMGYMPKRGLDVNKCEIARFFKLHERK-CEPIIMTVPRKSDLFQDDLYPD 417

Query:   449 TVGDTAALTADEWFAG 464
             T G  AAL A+EWF G
Sbjct:   418 TAGPEAALEAEEWFEG 433

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0051015 "actin filament binding" evidence=IEA

UNIPROTKB|Q9ULV4 CORO1C "Coronin-1C" [Homo sapiens (taxid:9606)]

 Score = 1054 (376.1 bits), Expect = 3.3e-115, Sum P(2) = 3.3e-115
 Identities = 193/316 (61%), Positives = 242/316 (76%)

Query:   151 TGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD 210
             TGRI+  +  V GH GPVLDI W PH+D VIASGSEDC V VWQIP+ G++ +LTEPVV 
Sbjct:    66 TGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVI 125

Query:   211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWD 269
             L  H +RVG+V WHPTA+NVLL+AG DN + IWNVGTGE +I ++  H D++Y+ SWN +
Sbjct:   126 LEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWNRN 185

Query:   270 GSKLLTTCKDKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQY 328
             GS + T  KDKK+R+I+PR   I  E+   HEG++  RAI+L  G +FTTGFS+MSERQ 
Sbjct:   186 GSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQL 245

Query:   329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI 388
             +L  P ++ EPI + E+DTSNGV+ P YDPDT+++YLCGKGDS IRYFEIT E P+VHY+
Sbjct:   246 ALWNPKNMQEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPYVHYL 305

Query:   389 NTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPD 448
             NTF + +PQRG+G MPKRG DVN CEI RFF+L+    C+ + MTVPRKS+LFQDDLYPD
Sbjct:   306 NTFSSKEPQRGMGYMPKRGLDVNKCEIARFFKLHERK-CEPIIMTVPRKSDLFQDDLYPD 364

Query:   449 TVGDTAALTADEWFAG 464
             T G  AAL A+EWF G
Sbjct:   365 TAGPEAALEAEEWFEG 380

GO:0015629 "actin cytoskeleton" evidence=IBA

GO:0030036 "actin cytoskeleton organization" evidence=IBA

GO:0051015 "actin filament binding" evidence=IBA

GO:0006909 "phagocytosis" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

UNIPROTKB|F1Q1F6 CORO1C "Coronin" [Canis lupus familiaris (taxid:9615)]

 Score = 1054 (376.1 bits), Expect = 3.3e-115, Sum P(2) = 3.3e-115
 Identities = 193/316 (61%), Positives = 242/316 (76%)

Query:   151 TGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD 210
             TGRI+  +  V GH GPVLDI W PH+D VIASGSEDC V VWQIP+ G++ +LTEPVV 
Sbjct:    66 TGRIDKSYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLTLSLTEPVVI 125

Query:   211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWD 269
             L  H +RVG+V WHPTA+NVLL+AG DN + IWNVGTGE +I ++  H D++Y+ SWN +
Sbjct:   126 LEGHSKRVGIVAWHPTARNVLLSAGCDNAIIIWNVGTGEALINLDDMHSDMIYNVSWNRN 185

Query:   270 GSKLLTTCKDKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQY 328
             GS + T  KDKK+R+I+PR   I  E+   HEG++  RAI+L  G +FTTGFS+MSERQ 
Sbjct:   186 GSLICTASKDKKVRVIDPRKQEIVAEKEKAHEGARPMRAIFLADGNVFTTGFSRMSERQL 245

Query:   329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI 388
             +L  P ++ EPI + E+DTSNGV+ P YDPDT+++YLCGKGDS IRYFEIT E P+VHY+
Sbjct:   246 ALWNPKNMQEPIALHEMDTSNGVLLPFYDPDTSIIYLCGKGDSSIRYFEITDESPYVHYL 305

Query:   389 NTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPD 448
             NTF + +PQRG+G MPKRG DVN CEI RFF+L+    C+ + MTVPRKS+LFQDDLYPD
Sbjct:   306 NTFSSKEPQRGMGYMPKRGLDVNKCEIARFFKLHERK-CEPIIMTVPRKSDLFQDDLYPD 364

Query:   449 TVGDTAALTADEWFAG 464
             T G  AAL A+EWF G
Sbjct:   365 TAGPEAALEAEEWFEG 380

GO:0051015 "actin filament binding" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ULV4	COR1C_HUMAN	No assigned EC number	0.6107	0.6387	0.6603	yes	N/A
Q21624	CORO_CAEEL	No assigned EC number	0.5431	0.6387	0.5156	yes	N/A
Q9WUM4	COR1C_MOUSE	No assigned EC number	0.6075	0.6387	0.6603	yes	N/A
P27133	COROA_DICDI	No assigned EC number	0.4196	0.6183	0.6808	yes	N/A
Q5NVK4	COR1B_PONAB	No assigned EC number	0.5830	0.6448	0.6462	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	490
PTZ00421	493	PTZ00421, PTZ00421, coronin; Provisional	6e-77
pfam08954	136	pfam08954, DUF1900, Domain of unknown function (DU	4e-70
PTZ00420	568	PTZ00420, PTZ00420, coronin; Provisional	2e-52
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	8e-23
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-18
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-18
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-16
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	3e-14
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-12
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	4e-12
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	4e-11
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-07
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	2e-07
smart00320	40	smart00320, WD40, WD40 repeats	3e-07
pfam08954	136	pfam08954, DUF1900, Domain of unknown function (DU	2e-04
pfam08662	194	pfam08662, eIF2A, Eukaryotic translation initiatio	0.001
smart00320	40	smart00320, WD40, WD40 repeats	0.003

>gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional

 Score =  249 bits (636), Expect = 6e-77
 Identities = 121/316 (38%), Positives = 186/316 (58%), Gaps = 6/316 (1%)

Query: 152 GRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDL 211
           G++ ++  ++ G +GP++D+A++P D   + + SED  +  W IP+ G+++ +++P+V L
Sbjct: 62  GKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHL 121

Query: 212 LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS 271
             H ++VG+V +HP+A NVL +AG+D  V +W+V  G+ +  I+CH D + S  WN DGS
Sbjct: 122 QGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGS 181

Query: 272 KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLK-SGLIFTTGFSKMSERQYSL 330
            L TT KDKK+ II+PR G I      H  +K+ R ++ K   LI T G SK  +RQ  L
Sbjct: 182 LLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIML 241

Query: 331 RAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT 390
                +  P   V+LD S+ +  P +D DTNL+Y+  KG+  IR FE+  E        +
Sbjct: 242 WDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCS--S 299

Query: 391 FQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKS--ELFQDDLYPD 448
           + + +P +G+ MMPK   D   CEI RF+ L    L   + M +PRK      Q D+YP 
Sbjct: 300 YSSVEPHKGLCMMPKWSLDTRKCEIARFYALTYHSLYT-IQMLLPRKQADSELQVDVYPP 358

Query: 449 TVGDTAALTADEWFAG 464
           T  D  A+TADE+F+G
Sbjct: 359 TFADHPAITADEYFSG 374

Length = 493

>gnl|CDD|220080 pfam08954, DUF1900, Domain of unknown function (DUF1900)

 Score =  218 bits (559), Expect = 4e-70
 Identities = 68/129 (52%), Positives = 90/129 (69%), Gaps = 2/129 (1%)

Query: 339 PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQR 398
           P+   ELDTS+GV+ P YD DT L+YL GKGD  IRY+E+T E P++HY++ + + +PQ+
Sbjct: 1   PLATEELDTSSGVLIPFYDEDTGLLYLAGKGDGNIRYYEVTDEEPYLHYLSEYTSTEPQK 60

Query: 399 GIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRK-SELFQDDLYPDTVGDTAALT 457
           G   +PKR  DV  CEI RF++L N    + +S  VPRK SELFQ+DLYPDT G   ALT
Sbjct: 61  GFCFLPKRALDVKKCEIARFYKLTNDS-IEPISFIVPRKNSELFQEDLYPDTAGTEPALT 119

Query: 458 ADEWFAGNE 466
           A+EW +G  
Sbjct: 120 AEEWLSGKN 128

This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function. Length = 136

>gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional

 Score =  185 bits (472), Expect = 2e-52
 Identities = 105/328 (32%), Positives = 171/328 (52%), Gaps = 22/328 (6%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGIS-RTLTEPVVDLLYHQRRVGLV 221
           GH   +LD+ ++P    ++ASGSED  ++VW+IP    S + + +P   L  H++++ ++
Sbjct: 72  GHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISII 131

Query: 222 LWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKK 281
            W+P    ++ ++G D+ V IW++   +   QI   P  + S  WN  G+ L  TC  K 
Sbjct: 132 DWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINM-PKKLSSLKWNIKGNLLSGTCVGKH 190

Query: 282 MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL------IFTTGFSKMSERQYSLRAPDH 335
           M II+PR   I      H+G K T+ I++  GL      I +TGFSK + R+  L    +
Sbjct: 191 MHIIDPRKQEIASSFHIHDGGKNTKNIWI-DGLGGDDNYILSTGFSKNNMREMKLWDLKN 249

Query: 336 LDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPD 395
               +V + +D ++  + P YD  T L+YL GKGD   RY++ +     +  +N +++  
Sbjct: 250 TTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGS--IRKVNEYKSCS 307

Query: 396 PQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRK-SELFQDDLYPDTVGDTA 454
           P R  G +PK+ CDV  CEIGR ++  N+   + +S  VPRK    FQ+DLYP  +    
Sbjct: 308 PFRSFGFLPKQICDVYKCEIGRVYKNENNSSIRPISFYVPRKNPTKFQEDLYPPILMHDP 367

Query: 455 ALTADEWFAG----------NELFQDDL 472
             ++  W  G           +L +DDL
Sbjct: 368 ERSSRNWIDGKDNKMKRINIKDLTEDDL 395

Length = 568

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 97.8 bits (244), Expect = 8e-23
 Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 16/219 (7%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
           GH GPV D+A S  D   +ASGS D  +++W +  G   RTLT        H   V  V 
Sbjct: 49  GHTGPVRDVAASA-DGTYLASGSSDKTIRLWDLETGECVRTLTG-------HTSYVSSVA 100

Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM 282
           + P  + +L ++  D  + +W+V TG+ +  +  H D V S +++ DG+ + ++ +D  +
Sbjct: 101 FSPDGR-ILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTI 159

Query: 283 RIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM 342
           ++ + RTG        H G       +   G    +  S  + + + L     L      
Sbjct: 160 KLWDLRTGKCVATLTGHTGE-VNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGH 218

Query: 343 VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE 381
                 NGV    + PD  L+   G  D  IR +++   
Sbjct: 219 -----ENGVNSVAFSPDGYLL-ASGSEDGTIRVWDLRTG 251

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 86.2 bits (214), Expect = 1e-18
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 9/140 (6%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
           GH G V  +A+SP D  ++A+GS D  +KVW +  G + RTL         H   V  V 
Sbjct: 7   GHTGGVTCVAFSP-DGKLLATGSGDGTIKVWDLETGELLRTLKG-------HTGPVRDVA 58

Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM 282
                   L +  SD  + +W++ TGE +  +  H   V S +++ DG  L ++ +DK +
Sbjct: 59  ASA-DGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTI 117

Query: 283 RIINPRTGAIEEEAVCHEGS 302
           ++ +  TG        H   
Sbjct: 118 KVWDVETGKCLTTLRGHTDW 137

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 84.3 bits (209), Expect = 4e-18
 Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 11/141 (7%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
           GH   V  +A+SP D   +AS S+D  +K+W +  G    TLT        H   V  V 
Sbjct: 133 GHTDWVNSVAFSP-DGTFVASSSQDGTIKLWDLRTGKCVATLTG-------HTGEVNSVA 184

Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KDKK 281
           + P  +  LL++ SD  + +W++ TG+ +  +  H + V S +++ DG  LL +  +D  
Sbjct: 185 FSPDGEK-LLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDG-YLLASGSEDGT 242

Query: 282 MRIINPRTGAIEEEAVCHEGS 302
           +R+ + RTG   +    H  S
Sbjct: 243 IRVWDLRTGECVQTLSGHTNS 263

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 80.1 bits (198), Expect = 1e-16
 Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 11/123 (8%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
           GH G V  +A+SP D   + S S D  +K+W +  G    TL         H+  V  V 
Sbjct: 175 GHTGEVNSVAFSP-DGEKLLSSSSDGTIKLWDLSTGKCLGTLR-------GHENGVNSVA 226

Query: 223 WHPTAQNVLLTAGS-DNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKK 281
           + P     LL +GS D  + +W++ TGE +  +  H + V S +W+ DG +L +   D  
Sbjct: 227 FSPD--GYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGT 284

Query: 282 MRI 284
           +RI
Sbjct: 285 IRI 287

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 74.4 bits (181), Expect = 3e-14
 Identities = 58/344 (16%), Positives = 121/344 (35%), Gaps = 27/344 (7%)

Query: 25  LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDG----YIP 80
           +  +   T  + +  L  H   V  + + P  + +   +  +    L  L+ G     + 
Sbjct: 136 VKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLA 195

Query: 81  PSEKSKSALKVTKRSNVLDKVGGKGGANRN-STANEITISEDYVKEFKEEIRKLKSQQAL 139
                 S+L  +    +L   G   G  R    +    +           +       +L
Sbjct: 196 GHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSL 255

Query: 140 SILPPPSTAPNTGRI------NADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW 193
                  ++  T R+      ++    + GH   VL +A+SP D  ++ASGS D  V++W
Sbjct: 256 LAS---GSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSP-DGKLLASGSSDGTVRLW 311

Query: 194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQ 253
            +  G +  +LT     L  H+  V  + + P    ++     D  + +W++ TG+ +  
Sbjct: 312 DLETGKLLSSLT-----LKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKT 366

Query: 254 IECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG 313
           +E H + V S S++ DG  + +   D  +R+ +  TG++      H     +        
Sbjct: 367 LEGHSN-VLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGK 425

Query: 314 LIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYD 357
            + +           ++R  D       +        +     D
Sbjct: 426 SLASGSSDN------TIRLWDLKTSLKSVSFSPDGKVLASKSSD 463

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 69.0 bits (167), Expect = 2e-12
 Identities = 52/224 (23%), Positives = 99/224 (44%), Gaps = 18/224 (8%)

Query: 160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG-GISRTLTEPVVDLLYHQRRV 218
           L+ GH+  +  IA+SP  +  + SGS D  +K+W + +G  + ++L         H   V
Sbjct: 60  LLRGHEDSITSIAFSPDGEL-LLSGSSDGTIKLWDLDNGEKLIKSLEG------LHDSSV 112

Query: 219 GLVLWHPTAQNVLLTAGS--DNNVAIWNVGT-GEIMIQIECHPDIVYSASWNWDGSKLLT 275
             +       N +L A S  D  V +W++ T G+++  +E H + V S +++ DG  L +
Sbjct: 113 SKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLAS 172

Query: 276 T-CKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPD 334
               D  +++ + RTG        H    ++ A     GL+  +G S  + R + L    
Sbjct: 173 GSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLS--- 229

Query: 335 HLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEI 378
                ++   L   +  +   + PD +L+      D  IR +++
Sbjct: 230 --TGKLLRSTLSGHSDSVVSSFSPDGSLLASGSS-DGTIRLWDL 270

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 67.8 bits (164), Expect = 4e-12
 Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 9/138 (6%)

Query: 158 HALVGGHKGPVLDIAWSPHDDNVIAS--GSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQ 215
            +L G H   V  +A S  D N I     S D  VK+W +       T  + +  L  H 
Sbjct: 102 KSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDL------STPGKLIRTLEGHS 155

Query: 216 RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLT 275
             V  + + P  + +   +  D  + +W++ TG+ +  +  H D V S +++ DG  L+ 
Sbjct: 156 ESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIA 215

Query: 276 TC-KDKKMRIINPRTGAI 292
           +   D  +R+ +  TG +
Sbjct: 216 SGSSDGTIRLWDLSTGKL 233

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 63.5 bits (155), Expect = 4e-11
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 9/82 (10%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
           GH+  V  +A+SP D  ++ASGSED  ++VW +  G   +TL+        H   V  + 
Sbjct: 217 GHENGVNSVAFSP-DGYLLASGSEDGTIRVWDLRTGECVQTLSG-------HTNSVTSLA 268

Query: 223 WHPTAQNVLLTAGSDNNVAIWN 244
           W P  +  L +  +D  + IW+
Sbjct: 269 WSPDGK-RLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 52.0 bits (125), Expect = 2e-07
 Identities = 30/162 (18%), Positives = 61/162 (37%), Gaps = 10/162 (6%)

Query: 214 HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL 273
           H   V  V + P    +L T   D  + +W++ TGE++  ++ H   V   + + DG+ L
Sbjct: 8   HTGGVTCVAFSPD-GKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYL 66

Query: 274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAI-YLKSGLIFTTGFSKMSERQYSLRA 332
            +   DK +R+ +  TG        H       ++ +   G I ++     + + + +  
Sbjct: 67  ASGSSDKTIRLWDLETGECVRTLTGHT--SYVSSVAFSPDGRILSSSSRDKTIKVWDVE- 123

Query: 333 PDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIR 374
                   +      ++ V    + PD   V      D  I+
Sbjct: 124 ----TGKCLTTLRGHTDWVNSVAFSPDGTFVA-SSSQDGTIK 160

Length = 289

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 18/31 (58%), Positives = 24/31 (77%), Gaps = 1/31 (3%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVW 193
           GH GPV  +A+SP D N++ASGS+D  V+VW
Sbjct: 9   GHTGPVTSVAFSP-DGNLLASGSDDGTVRVW 38

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 46.5 bits (111), Expect = 3e-07
 Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVW 193
           GH GPV  +A+SP D   +ASGS+D  +K+W
Sbjct: 10  GHTGPVTSVAFSP-DGKYLASGSDDGTIKLW 39

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|220080 pfam08954, DUF1900, Domain of unknown function (DUF1900)

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 13/20 (65%), Positives = 15/20 (75%)

Query: 1   DLYPDTVGDTAALTADEWFA 20
           DLYPDT G   ALTA+EW +
Sbjct: 106 DLYPDTAGTEPALTAEEWLS 125

This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function. Length = 136

>gnl|CDD|149648 pfam08662, eIF2A, Eukaryotic translation initiation factor eIF2A

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 30/131 (22%), Positives = 49/131 (37%), Gaps = 27/131 (20%)

Query: 165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLT------EPVVDLLYHQRRV 218
           +GP+ D AWSP       +G E  V+       G +   +T        +  L    R  
Sbjct: 59  EGPIHDFAWSP-------NGKEFAVIY------GYMPAKITFFDLKGNVIHSLGEQPRNT 105

Query: 219 GLVLWHPTAQNVLLTAGSDN---NVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLT 275
             + W P    ++L AG  N    +  W+V   + +   E   +      W+ DG   LT
Sbjct: 106 --IFWSPFG-RLVLLAGFGNLAGQIEFWDVKNKKKIATAE-ASNATDCE-WSPDGRYFLT 160

Query: 276 TCKDKKMRIIN 286
                ++R+ N
Sbjct: 161 ATTSPRLRVDN 171

This is a family of eukaryotic translation initiation factors. Length = 194

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 35.0 bits (81), Expect = 0.003
 Identities = 9/40 (22%), Positives = 22/40 (55%)

Query: 247 TGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIIN 286
           +GE++  ++ H   V S +++ DG  L +   D  +++ +
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	490
KOG0303|consensus	472		100.0
PTZ00421	493	coronin; Provisional	100.0
KOG0271|consensus	480		100.0
PTZ00420	568	coronin; Provisional	100.0
KOG0271|consensus	480		100.0
KOG0272|consensus	459		100.0
KOG0286|consensus	343		100.0
KOG0279|consensus	315		100.0
KOG0272|consensus	459		100.0
KOG0273|consensus	524		100.0
KOG0315|consensus	311		100.0
KOG0318|consensus	603		100.0
KOG0645|consensus	312		100.0
KOG0279|consensus	315		100.0
KOG0265|consensus	338		100.0
KOG0263|consensus	707		100.0
KOG0285|consensus	460		100.0
KOG0284|consensus	464		100.0
KOG1445|consensus	1012		100.0
KOG0318|consensus	603		100.0
KOG0315|consensus	311		100.0
KOG0319|consensus	775		100.0
KOG0282|consensus	503		100.0
KOG0284|consensus	464		100.0
KOG0291|consensus	893		100.0
KOG0316|consensus	307		100.0
KOG0295|consensus	406		100.0
KOG0263|consensus	707		100.0
KOG0291|consensus	893		100.0
KOG0266|consensus	456		100.0
KOG0286|consensus	343		100.0
KOG0296|consensus	399		100.0
KOG0319|consensus	775		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0273|consensus	524		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0278|consensus	334		100.0
KOG0283|consensus	712		100.0
KOG0293|consensus	519		100.0
KOG0295|consensus	406		100.0
KOG0643|consensus	327		100.0
KOG1407|consensus	313		100.0
KOG0640|consensus	430		100.0
KOG0275|consensus	508		100.0
KOG0266|consensus	456		100.0
KOG1445|consensus	1012		100.0
KOG0292|consensus	1202		100.0
KOG0313|consensus	423		100.0
KOG0292|consensus	1202		100.0
KOG0645|consensus	312		100.0
KOG0276|consensus	794		100.0
KOG0285|consensus	460		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0281|consensus	499		100.0
KOG0265|consensus	338		100.0
KOG0306|consensus	888		100.0
KOG0277|consensus	311		99.98
KOG0296|consensus	399		99.98
KOG0306|consensus	888		99.98
KOG0268|consensus	433		99.98
KOG0973|consensus	942		99.97
KOG0276|consensus	794		99.97
KOG0772|consensus	641		99.97
KOG0281|consensus	499		99.97
PTZ00421	493	coronin; Provisional	99.97
KOG2096|consensus	420		99.97
KOG0310|consensus	487		99.97
KOG0277|consensus	311		99.97
KOG0283|consensus	712		99.97
KOG1446|consensus	311		99.97
KOG0264|consensus	422		99.97
KOG0288|consensus	459		99.97
KOG0299|consensus	479		99.97
KOG0316|consensus	307		99.97
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.97
PTZ00420	568	coronin; Provisional	99.97
KOG0313|consensus	423		99.96
KOG0278|consensus	334		99.96
KOG0282|consensus	503		99.96
KOG1408|consensus	1080		99.96
KOG0300|consensus	481		99.96
KOG0289|consensus	506		99.96
KOG0275|consensus	508		99.96
KOG0269|consensus	839		99.96
KOG0289|consensus	506		99.96
KOG0274|consensus	537		99.96
KOG0308|consensus	735		99.96
KOG0293|consensus	519		99.96
KOG0274|consensus	537		99.96
KOG1407|consensus	313		99.96
KOG0647|consensus	347		99.96
KOG0641|consensus	350		99.96
KOG0305|consensus	484		99.96
KOG0973|consensus	942		99.96
KOG0305|consensus	484		99.96
KOG0772|consensus	641		99.96
KOG2106|consensus	626		99.96
KOG0643|consensus	327		99.96
KOG0310|consensus	487		99.96
KOG1446|consensus	311		99.95
KOG1063|consensus	764		99.95
KOG0301|consensus	745		99.95
KOG1332|consensus	299		99.95
KOG0288|consensus	459		99.95
KOG0640|consensus	430		99.95
KOG1539|consensus	910		99.95
KOG0264|consensus	422		99.95
KOG1408|consensus	1080		99.95
KOG0639|consensus	705		99.95
KOG1274|consensus	933		99.95
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.95
KOG0294|consensus	362		99.94
KOG2106|consensus	626		99.94
KOG2055|consensus	514		99.94
KOG0641|consensus	350		99.94
KOG0294|consensus	362		99.94
KOG1036|consensus	323		99.94
KOG0300|consensus	481		99.94
KOG1273|consensus	405		99.94
KOG0308|consensus	735		99.94
KOG0299|consensus	479		99.94
KOG1332|consensus	299		99.94
KOG1539|consensus	910		99.94
KOG0646|consensus	476		99.93
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.93
KOG4283|consensus	397		99.93
KOG4328|consensus	498		99.93
KOG0270|consensus	463		99.93
KOG0302|consensus	440		99.93
KOG2048|consensus	691		99.93
KOG0647|consensus	347		99.92
KOG0301|consensus	745		99.92
KOG2445|consensus	361		99.92
KOG0269|consensus	839		99.92
KOG4283|consensus	397		99.92
KOG1036|consensus	323		99.91
KOG0307|consensus	1049		99.91
KOG1063|consensus	764		99.91
KOG2096|consensus	420		99.91
KOG0650|consensus	733		99.91
KOG1034|consensus	385		99.91
KOG0267|consensus	825		99.91
KOG4378|consensus	673		99.91
KOG0267|consensus	825		99.91
KOG0321|consensus	720		99.91
KOG1009|consensus	434		99.9
KOG0302|consensus	440		99.9
KOG1034|consensus	385		99.9
KOG0268|consensus	433		99.9
KOG2048|consensus	691		99.9
KOG0270|consensus	463		99.9
KOG4378|consensus	673		99.89
KOG0639|consensus	705		99.89
KOG4328|consensus	498		99.89
KOG0321|consensus	720		99.89
KOG2919|consensus	406		99.89
KOG1274|consensus	933		99.89
KOG2445|consensus	361		99.88
KOG0303|consensus	472		99.88
KOG1273|consensus	405		99.88
KOG0646|consensus	476		99.88
KOG2919|consensus	406		99.88
KOG0307|consensus	1049		99.87
KOG1524|consensus	737		99.87
KOG2055|consensus	514		99.86
KOG1007|consensus	370		99.85
COG2319	466	FOG: WD40 repeat [General function prediction only	99.85
KOG0642|consensus	577		99.85
KOG1963|consensus	792		99.84
KOG0650|consensus	733		99.83
KOG0649|consensus	325		99.82
KOG1007|consensus	370		99.82
KOG1538|consensus	1081		99.82
KOG2110|consensus	391		99.82
PRK11028	330	6-phosphogluconolactonase; Provisional	99.82
KOG1009|consensus	434		99.82
PRK11028	330	6-phosphogluconolactonase; Provisional	99.81
KOG0290|consensus	364		99.81
KOG1188|consensus	376		99.81
KOG4227|consensus	609		99.81
KOG0642|consensus	577		99.81
KOG1587|consensus	555		99.8
COG2319	466	FOG: WD40 repeat [General function prediction only	99.8
KOG1517|consensus	1387		99.8
KOG0290|consensus	364		99.79
KOG0644|consensus	1113		99.79
KOG0322|consensus	323		99.79
KOG1310|consensus	758		99.79
KOG1334|consensus	559		99.78
KOG1538|consensus	1081		99.78
KOG1188|consensus	376		99.78
KOG0771|consensus	398		99.78
PF08954	136	DUF1900: Domain of unknown function (DUF1900); Int	99.77
KOG4227|consensus	609		99.76
KOG1587|consensus	555		99.74
KOG1240|consensus	1431		99.74
KOG2110|consensus	391		99.74
KOG2139|consensus	445		99.73
KOG1310|consensus	758		99.73
PRK01742	429	tolB translocation protein TolB; Provisional	99.73
KOG0649|consensus	325		99.73
KOG1517|consensus	1387		99.72
PRK05137	435	tolB translocation protein TolB; Provisional	99.71
KOG0771|consensus	398		99.71
KOG1963|consensus	792		99.71
KOG2139|consensus	445		99.7
KOG0644|consensus	1113		99.7
KOG1272|consensus	545		99.7
PRK03629	429	tolB translocation protein TolB; Provisional	99.7
KOG1523|consensus	361		99.7
KOG0322|consensus	323		99.69
PRK01742	429	tolB translocation protein TolB; Provisional	99.69
PRK04922	433	tolB translocation protein TolB; Provisional	99.68
PRK02889	427	tolB translocation protein TolB; Provisional	99.68
KOG1523|consensus	361		99.68
KOG1524|consensus	737		99.68
KOG4497|consensus	447		99.67
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.66
KOG2111|consensus	346		99.65
KOG2394|consensus	636		99.64
KOG1272|consensus	545		99.63
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.62
KOG4497|consensus	447		99.61
KOG3881|consensus	412		99.6
KOG1240|consensus	1431		99.59
PRK04922	433	tolB translocation protein TolB; Provisional	99.58
KOG1409|consensus	404		99.58
KOG2394|consensus	636		99.58
KOG3881|consensus	412		99.58
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.58
KOG1334|consensus	559		99.58
PRK03629	429	tolB translocation protein TolB; Provisional	99.57
PRK05137	435	tolB translocation protein TolB; Provisional	99.57
KOG1354|consensus	433		99.57
KOG2321|consensus	703		99.57
KOG2321|consensus	703		99.57
PRK00178	430	tolB translocation protein TolB; Provisional	99.56
PRK04792	448	tolB translocation protein TolB; Provisional	99.55
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.55
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.55
PRK01029	428	tolB translocation protein TolB; Provisional	99.54
PRK02889	427	tolB translocation protein TolB; Provisional	99.54
KOG2111|consensus	346		99.54
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.53
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.53
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.49
KOG2315|consensus	566		99.44
PRK01029	428	tolB translocation protein TolB; Provisional	99.43
KOG4547|consensus	541		99.43
PRK00178	430	tolB translocation protein TolB; Provisional	99.43
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.41
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.39
PRK04792	448	tolB translocation protein TolB; Provisional	99.38
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.38
KOG4190|consensus	1034		99.36
KOG0974|consensus	967		99.35
KOG0974|consensus	967		99.34
KOG2314|consensus	698		99.34
KOG0280|consensus	339		99.33
KOG4547|consensus	541		99.31
KOG1064|consensus	2439		99.29
KOG0280|consensus	339		99.29
KOG2041|consensus	1189		99.29
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.28
KOG0309|consensus	1081		99.23
PRK04043	419	tolB translocation protein TolB; Provisional	99.21
KOG2314|consensus	698		99.19
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.19
COG4946	668	Uncharacterized protein related to the periplasmic	99.18
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.18
KOG1354|consensus	433		99.17
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.17
PRK04043	419	tolB translocation protein TolB; Provisional	99.15
KOG1064|consensus	2439		99.13
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.11
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.11
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.11
KOG2315|consensus	566		99.11
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.1
COG4946	668	Uncharacterized protein related to the periplasmic	99.06
KOG4532|consensus	344		99.03
KOG4190|consensus	1034		99.0
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.99
KOG2041|consensus	1189		98.99
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.98
KOG4532|consensus	344		98.97
KOG1645|consensus	463		98.96
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.95
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.95
KOG1912|consensus	1062		98.93
KOG1409|consensus	404		98.9
KOG1832|consensus	1516		98.88
KOG3914|consensus	390		98.86
KOG0309|consensus	1081		98.86
KOG4714|consensus	319		98.86
KOG4714|consensus	319		98.82
KOG1912|consensus	1062		98.82
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.8
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.8
KOG3914|consensus	390		98.8
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.79
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.77
KOG1275|consensus	1118		98.76
KOG2695|consensus	425		98.73
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.7
KOG2695|consensus	425		98.7
KOG0882|consensus	558		98.68
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.68
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.63
KOG1920|consensus	1265		98.59
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.58
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.56
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.54
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.52
KOG1008|consensus	783		98.51
KOG1832|consensus	1516		98.48
KOG1275|consensus	1118		98.47
KOG2066|consensus	846		98.44
KOG1645|consensus	463		98.44
KOG2066|consensus	846		98.44
COG3391	381	Uncharacterized conserved protein [Function unknow	98.37
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.35
PRK02888	635	nitrous-oxide reductase; Validated	98.35
KOG3617|consensus	1416		98.33
KOG2114|consensus	933		98.32
KOG0882|consensus	558		98.31
KOG2114|consensus	933		98.3
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.28
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.27
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.26
KOG4649|consensus	354		98.2
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.19
PRK02888	635	nitrous-oxide reductase; Validated	98.18
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.17
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.06
KOG1920|consensus	1265		97.99
COG3391	381	Uncharacterized conserved protein [Function unknow	97.98
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	97.98
KOG1008|consensus	783		97.98
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.97
KOG4640|consensus	665		97.95
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.93
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	97.9
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.89
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	97.86
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	97.84
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	97.83
KOG3621|consensus	726		97.83
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	97.81
KOG3617|consensus	1416		97.78
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	97.77
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.76
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.75
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	97.72
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	97.71
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.69
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	97.68
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	97.64
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	97.64
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.64
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.63
KOG4649|consensus	354		97.62
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.61
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	97.6
KOG3621|consensus	726		97.54
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	97.54
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.53
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	97.5
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.49
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.49
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.43
KOG4640|consensus	665		97.42
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	97.4
KOG2395|consensus	644		97.4
KOG3630|consensus	1405		97.31
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	97.25
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.24
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.23
KOG4441|consensus	571		97.22
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	97.22
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.16
PRK13616	591	lipoprotein LpqB; Provisional	97.14
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.13
PRK13616	591	lipoprotein LpqB; Provisional	97.09
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	97.08
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	96.98
KOG2079|consensus	1206		96.97
KOG2395|consensus	644		96.92
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	96.84
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	96.84
PRK10115	686	protease 2; Provisional	96.83
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	96.75
KOG2079|consensus	1206		96.74
PHA02713	557	hypothetical protein; Provisional	96.73
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	96.69
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	96.68
PRK10115	686	protease 2; Provisional	96.63
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	96.59
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.35
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.27
KOG2444|consensus	238		96.21
KOG2444|consensus	238		96.06
PHA03098	534	kelch-like protein; Provisional	96.04
PHA02713	557	hypothetical protein; Provisional	95.95
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	95.9
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	95.9
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	95.64
KOG4441|consensus	571		95.43
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	95.32
KOG4499|consensus	310		95.24
KOG3630|consensus	1405		95.17
PHA02790	480	Kelch-like protein; Provisional	95.02
KOG2280|consensus	829		95.01
PHA03098	534	kelch-like protein; Provisional	94.98
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	94.92
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	94.71
PHA02790	480	Kelch-like protein; Provisional	94.65
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	94.6
KOG4499|consensus	310		94.54
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	94.49
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.23
KOG1897|consensus	1096		94.1
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	93.92
KOG1916|consensus	1283		93.85
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	93.37
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	93.33
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	93.22
KOG1898|consensus	1205		93.21
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	93.13
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	92.99
KOG2247|consensus	615		92.97
KOG1897|consensus	1096		92.91
COG5167	776	VID27 Protein involved in vacuole import and degra	92.6
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	92.37
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	92.22
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	91.98
KOG2377|consensus	657		91.96
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	91.62
KOG2280|consensus	829		91.45
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	91.27
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	91.25
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	91.08
PF13449	326	Phytase-like: Esterase-like activity of phytase	90.88
KOG1916|consensus	1283		90.48
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	89.97
COG5167	776	VID27 Protein involved in vacuole import and degra	89.88
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	89.84
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	89.52
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	89.27
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	89.02
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	89.01
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	88.84
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	88.7
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	88.67
PF14727	418	PHTB1_N: PTHB1 N-terminus	88.55
KOG4460|consensus	741		88.09
COG5276	370	Uncharacterized conserved protein [Function unknow	88.08
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	87.66
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	87.58
KOG3616|consensus	1636		87.39
KOG2247|consensus	615		87.34
PF14727	418	PHTB1_N: PTHB1 N-terminus	87.08
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	86.85
PRK13684	334	Ycf48-like protein; Provisional	86.01
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	85.95
PLN02153	341	epithiospecifier protein	85.89
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	85.81
PRK13684	334	Ycf48-like protein; Provisional	84.77
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	84.3
COG5276	370	Uncharacterized conserved protein [Function unknow	83.91
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	83.88
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	83.56
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	83.42
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	83.38
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	81.33
PF13449	326	Phytase-like: Esterase-like activity of phytase	81.25
KOG3522|consensus	925		80.48

>KOG0303|consensus

Probab=100.00  E-value=2.9e-52  Score=362.31  Aligned_cols=347  Identities=61%  Similarity=1.059  Sum_probs=333.0

Q ss_pred             cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc
Q psy17682        124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT  203 (490)
Q Consensus       124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~  203 (490)
                      .+|.+++.-+++.|.+.|.++.    +.|++...+..+.||+++|..++|+|.+++.+||||+|.+|.||++..+.....
T Consensus        44 PkfiAvi~easgGgaf~ViPl~----k~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~  119 (472)
T KOG0303|consen   44 PKFVAVIIEASGGGAFLVIPLV----KTGRMDASYPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRD  119 (472)
T ss_pred             CceEEEEEecCCCcceeecccc----cccccCCCCCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccC
Confidence            6789999999999999999999    999999999999999999999999999989999999999999999999999999


Q ss_pred             cccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEE
Q psy17682        204 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMR  283 (490)
Q Consensus       204 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  283 (490)
                      +..|...+.+|...|-.++|+|...|.|++++.|.+|.+|++.+++.+.++. |...|+++.|+.||.+|++++.|..||
T Consensus       120 ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvR  198 (472)
T KOG0303|consen  120 LTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVR  198 (472)
T ss_pred             cccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeE
Confidence            9999999999999999999999998999999999999999999999988888 999999999999999999999999999


Q ss_pred             EEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeE
Q psy17682        284 IINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLV  363 (490)
Q Consensus       284 iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  363 (490)
                      |||.++++.+..-.+|.+.....+.|-.+|.++.+|....+++.+.+||..+.+.+....+++..++|.-.-|.+|...+
T Consensus       199 v~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~iv  278 (472)
T KOG0303|consen  199 VIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIV  278 (472)
T ss_pred             EEcCCCCcEeeecccccCCCcceeEEeccCceeeeccccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEE
Confidence            99999999999988999988999999999999999999889999999999999999999999999999999999999999


Q ss_pred             EEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecCCCceEEEEEEEeCCCcCccc
Q psy17682        364 YLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQD  443 (490)
Q Consensus       364 ~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~~~  443 (490)
                      |++|-.|+.||.|.+.+..|+++.+..+...++.+++.|-|+.-+-++.|+..|+|++.+.. |+||++++|||+++||+
T Consensus       279 Yl~GKGD~~IRYyEit~d~P~~hyln~f~S~epQRG~g~mPKRGl~Vs~cEI~rfyKl~~~~-~epIsm~VPRkSdlFQe  357 (472)
T KOG0303|consen  279 YLCGKGDSSIRYFEITNEPPFVHYLNTFSSKEPQRGMGFMPKRGLDVSKCEIARFYKLHERK-CEPISMTVPRKSDLFQE  357 (472)
T ss_pred             EEEecCCcceEEEEecCCCceeEEecccccCCccccccccccccccchHHHHHHHHHhhcce-eeeEEEeccccchhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999995 99999999999999999


Q ss_pred             CCCCCCCCCCCccchhhhcCCCCCCCcccCCCC
Q psy17682        444 DLYPDTVGDTAALTADEWFAGNELFQDDLYPDT  476 (490)
Q Consensus       444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  476 (490)
                      |+||++++.+|+|+++||+.|+++.+..++...
T Consensus       358 DlYPdt~~~~paLtAEEW~sGkda~Pilisl~~  390 (472)
T KOG0303|consen  358 DLYPDTPGPEPALTAEEWLSGKDADPILISLRD  390 (472)
T ss_pred             ccCCCCCCCCccccHHHhhcCCCCCCeEEEccc
Confidence            999999999999999999999998877666544

>PTZ00421 coronin; Provisional

Probab=100.00  E-value=3.8e-48  Score=373.72  Aligned_cols=330  Identities=36%  Similarity=0.669  Sum_probs=276.9

Q ss_pred             CcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCC
Q psy17682        150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQN  229 (490)
Q Consensus       150 ~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~  229 (490)
                      ..++.......+.+|.+.|.+++|+|.++++|++|+.|++|++||+.++........+...+.+|...|.+++|+|++.+
T Consensus        60 ~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~  139 (493)
T PTZ00421         60 DYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMN  139 (493)
T ss_pred             ccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCC
Confidence            33444444456789999999999999433899999999999999998765444444566678899999999999998767


Q ss_pred             EEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEE
Q psy17682        230 VLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIY  309 (490)
Q Consensus       230 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  309 (490)
                      +|++++.|++|+|||+++++.+..+.+|...|.+++|+|++.+|++++.|++|++||+++++.+.++..|.+.....+.|
T Consensus       140 iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w  219 (493)
T PTZ00421        140 VLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLW  219 (493)
T ss_pred             EEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999988888887765667889


Q ss_pred             eCCCcEEEE-EeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEe
Q psy17682        310 LKSGLIFTT-GFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI  388 (490)
Q Consensus       310 s~~~~~l~~-~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~  388 (490)
                      .+++..+++ |.+...++.|++||+++...+......+....+..+.|++++++|+++|..|+.|++||+.+++.+.  .
T Consensus       220 ~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~--~  297 (493)
T PTZ00421        220 AKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTF--C  297 (493)
T ss_pred             cCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEE--E
Confidence            988666554 4333468999999999877666555545555677788999999996666579999999999987432  2


Q ss_pred             eeeeCCCceeeEEEeeCceeEEeecceeEEEEecCCCceEEEEEEEeCCC--cCcccCCCCCCCCCCCccchhhhcCCCC
Q psy17682        389 NTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKS--ELFQDDLYPDTVGDTAALTADEWFAGNE  466 (490)
Q Consensus       389 ~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  466 (490)
                      ..+....++.+++|.|+..+-+..++..|+|++.... ++||+|.+|||.  +.||+|+||+++..+|+++++||++|++
T Consensus       298 ~~~~s~~~~~g~~~~pk~~~dv~~~Ei~r~~~l~~~~-i~pis~~vpRk~~~~~fq~DlyP~t~~~~p~~ta~ew~~G~~  376 (493)
T PTZ00421        298 SSYSSVEPHKGLCMMPKWSLDTRKCEIARFYALTYHS-LYTIQMLLPRKQADSELQVDVYPPTFADHPAITADEYFSGGN  376 (493)
T ss_pred             eeccCCCCCcceEecccccccccceeeeEEEEecCCe-EEEEEEEeccCCCccccccccCCCCCCCCCccCHHHHhCCCC
Confidence            3345567899999999999999999999999998877 999999999985  7999999999999999999999999999


Q ss_pred             CCCcccCCCCcCCccc
Q psy17682        467 LFQDDLYPDTVGDTAA  482 (490)
Q Consensus       467 ~~~~~~~~~~~~~~~~  482 (490)
                      +.+..++.....+..+
T Consensus       377 ~~p~~~sl~~~~~~~~  392 (493)
T PTZ00421        377 AEPLVYDMSAVFDGTS  392 (493)
T ss_pred             CCCeEEEchhhccCCC
Confidence            9999887766544433

>KOG0271|consensus

Probab=100.00  E-value=7.4e-49  Score=339.64  Aligned_cols=338  Identities=18%  Similarity=0.250  Sum_probs=282.1

Q ss_pred             eccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCC
Q psy17682         28 FSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGA  107 (490)
Q Consensus        28 ~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (490)
                      |--++.+.....+.||.+.|.|+.|+|++ ..|+||+.|.++|+||+.+.....+.+                       
T Consensus        99 frvrpvtrCssS~~GH~e~Vl~~~fsp~g-~~l~tGsGD~TvR~WD~~TeTp~~t~K-----------------------  154 (480)
T KOG0271|consen   99 FRVRPVTRCSSSIAGHGEAVLSVQFSPTG-SRLVTGSGDTTVRLWDLDTETPLFTCK-----------------------  154 (480)
T ss_pred             hcccccceeccccCCCCCcEEEEEecCCC-ceEEecCCCceEEeeccCCCCcceeec-----------------------
Confidence            44467788888899999999999999998 999999999999999999865322111                       


Q ss_pred             cccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCC----CCCEEEE
Q psy17682        108 NRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPH----DDNVIAS  183 (490)
Q Consensus       108 ~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~----~~~~l~s  183 (490)
                      .+..-|.+++|+||+     ..+++++.+|.|.+|+..     .++  ...+.+.||+..|++++|.|-    +..+||+
T Consensus       155 gH~~WVlcvawsPDg-----k~iASG~~dg~I~lwdpk-----tg~--~~g~~l~gH~K~It~Lawep~hl~p~~r~las  222 (480)
T KOG0271|consen  155 GHKNWVLCVAWSPDG-----KKIASGSKDGSIRLWDPK-----TGQ--QIGRALRGHKKWITALAWEPLHLVPPCRRLAS  222 (480)
T ss_pred             CCccEEEEEEECCCc-----chhhccccCCeEEEecCC-----CCC--cccccccCcccceeEEeecccccCCCccceec
Confidence            134468899999996     578999999999999974     222  134578899999999999773    2368999


Q ss_pred             EeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEE
Q psy17682        184 GSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYS  263 (490)
Q Consensus       184 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~  263 (490)
                      ++.||.|+|||+..+.++..       +.+|..+|+|+.|--+|  ++++|+.|++|++|+...|.+...+++|...|+.
T Consensus       223 ~skDg~vrIWd~~~~~~~~~-------lsgHT~~VTCvrwGG~g--liySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~  293 (480)
T KOG0271|consen  223 SSKDGSVRIWDTKLGTCVRT-------LSGHTASVTCVRWGGEG--LIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNH  293 (480)
T ss_pred             ccCCCCEEEEEccCceEEEE-------eccCccceEEEEEcCCc--eEEecCCCceEEEEEccchhHHHhhcccchheee
Confidence            99999999999988877665       56799999999998665  8999999999999999999999999999999999


Q ss_pred             EEEc-----------CCCC-------------------------EEEEEeCCCeEEEEeCCCC-ceeeeeeecCCCceeE
Q psy17682        264 ASWN-----------WDGS-------------------------KLLTTCKDKKMRIINPRTG-AIEEEAVCHEGSKATR  306 (490)
Q Consensus       264 ~~~~-----------~~~~-------------------------~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~  306 (490)
                      ++.+           |.++                         .+++|+.|.++.+|+.... +++..+.+|... +..
T Consensus       294 lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~l-Vn~  372 (480)
T KOG0271|consen  294 LALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQAL-VNH  372 (480)
T ss_pred             eeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhh-eee
Confidence            9877           3233                         4999999999999998654 477788899875 999


Q ss_pred             EEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeE
Q psy17682        307 AIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVH  386 (490)
Q Consensus       307 ~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~  386 (490)
                      +.||||++++|+++   -|..|++||.++++....+.  +|...|..++|+.|.++| ++|+.|.++++|++++.+    
T Consensus       373 V~fSPd~r~IASaS---FDkSVkLW~g~tGk~lasfR--GHv~~VYqvawsaDsRLl-VS~SkDsTLKvw~V~tkK----  442 (480)
T KOG0271|consen  373 VSFSPDGRYIASAS---FDKSVKLWDGRTGKFLASFR--GHVAAVYQVAWSADSRLL-VSGSKDSTLKVWDVRTKK----  442 (480)
T ss_pred             EEECCCccEEEEee---cccceeeeeCCCcchhhhhh--hccceeEEEEeccCccEE-EEcCCCceEEEEEeeeee----
Confidence            99999999999999   79999999999987543332  577889999999999998 899999999999999987    


Q ss_pred             Eeeee-eCCCceeeEEEeeCceeEEeecceeEEEEec
Q psy17682        387 YINTF-QTPDPQRGIGMMPKRGCDVNSCEIGRFFRLN  422 (490)
Q Consensus       387 ~~~~~-~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~  422 (490)
                      ....+ .|.+.|.++.|+|||..+++++.+ ++++++
T Consensus       443 l~~DLpGh~DEVf~vDwspDG~rV~sggkd-kv~~lw  478 (480)
T KOG0271|consen  443 LKQDLPGHADEVFAVDWSPDGQRVASGGKD-KVLRLW  478 (480)
T ss_pred             ecccCCCCCceEEEEEecCCCceeecCCCc-eEEEee
Confidence            22333 366789999999999998877653 554443

>PTZ00420 coronin; Provisional

Probab=100.00  E-value=1.4e-45  Score=357.01  Aligned_cols=333  Identities=29%  Similarity=0.539  Sum_probs=270.5

Q ss_pred             CCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCc-ccccccceeeec
Q psy17682        134 KSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGI-SRTLTEPVVDLL  212 (490)
Q Consensus       134 ~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~  212 (490)
                      +..+.+.+|+..       + ...+..+.+|.+.|.+++|+|+.+.+|++|+.||+|+|||+.++.. ...+..+...+.
T Consensus        51 G~~gvI~L~~~~-------r-~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~  122 (568)
T PTZ00420         51 GLIGAIRLENQM-------R-KPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILK  122 (568)
T ss_pred             CceeEEEeeecC-------C-CceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEee
Confidence            345667777654       1 2346678899999999999997558999999999999999986532 222334555678


Q ss_pred             ccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy17682        213 YHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI  292 (490)
Q Consensus       213 ~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  292 (490)
                      +|...|.+++|+|++..+|++++.|++|++||+++++.+..+. |...|.+++|+|+|.+|++++.|+.|+|||+++++.
T Consensus       123 gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~  201 (568)
T PTZ00420        123 GHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEI  201 (568)
T ss_pred             cCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcE
Confidence            8999999999999987677899999999999999998877776 667899999999999999999999999999999999


Q ss_pred             eeeeeecCCCceeEE----EEeCCCcEEEEEe-CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEe
Q psy17682        293 EEEAVCHEGSKATRA----IYLKSGLIFTTGF-SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCG  367 (490)
Q Consensus       293 ~~~~~~~~~~~~~~~----~~s~~~~~l~~~~-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g  367 (490)
                      +.++.+|.+......    .|++++.++++++ ++..++.|+|||++....+......+...++....+.++...++++|
T Consensus       202 i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsG  281 (568)
T PTZ00420        202 ASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIG  281 (568)
T ss_pred             EEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEE
Confidence            999988887532222    3457877766654 33345789999999766666555555444554555656644555899


Q ss_pred             cCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecCCCceEEEEEEEeCC-CcCcccCCC
Q psy17682        368 KGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRK-SELFQDDLY  446 (490)
Q Consensus       368 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~p~~-~~~~~~~~~  446 (490)
                      +.|+.|++|++..+.  ...+..+.+..++.+++|.|+..+-+..++..|+|++...+.++|++|.+||| ++.||+|+|
T Consensus       282 kGD~tIr~~e~~~~~--~~~l~~~~s~~p~~g~~f~Pkr~~dv~~cEi~R~~kl~~~~~i~pisf~vPRk~~~~Fq~Dly  359 (568)
T PTZ00420        282 KGDGNCRYYQHSLGS--IRKVNEYKSCSPFRSFGFLPKQICDVYKCEIGRVYKNENNSSIRPISFYVPRKNPTKFQEDLY  359 (568)
T ss_pred             ECCCeEEEEEccCCc--EEeecccccCCCccceEEccccccCchhhhHhHHhhhcCCCeEEEEEEEeccCCchhcccccC
Confidence            999999999998764  55677777788999999999999999999999999998765699999999998 599999999


Q ss_pred             CCCCCCCCccchhhhcCCCCCCCcccCCCCc
Q psy17682        447 PDTVGDTAALTADEWFAGNELFQDDLYPDTV  477 (490)
Q Consensus       447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  477 (490)
                      |+++..+|++++++|++|.++.+..++...+
T Consensus       360 P~t~~~~pa~ta~eW~~G~~~~p~~~sl~~~  390 (568)
T PTZ00420        360 PPILMHDPERSSRNWIDGKDNKMKRINIKDL  390 (568)
T ss_pred             CCCCCCCcccCHHHHhCCCCCCCcEEecccc
Confidence            9999999999999999999999887766543

>KOG0271|consensus

Probab=100.00  E-value=1.1e-44  Score=313.76  Aligned_cols=304  Identities=18%  Similarity=0.249  Sum_probs=260.4

Q ss_pred             eeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCC
Q psy17682         26 TYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKG  105 (490)
Q Consensus        26 ~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (490)
                      -+|++. ...|..+.+||...|.|++|+|++ ..||||+.||+|++||.++++...                 .     .
T Consensus       140 R~WD~~-TeTp~~t~KgH~~WVlcvawsPDg-k~iASG~~dg~I~lwdpktg~~~g-----------------~-----~  195 (480)
T KOG0271|consen  140 RLWDLD-TETPLFTCKGHKNWVLCVAWSPDG-KKIASGSKDGSIRLWDPKTGQQIG-----------------R-----A  195 (480)
T ss_pred             EeeccC-CCCcceeecCCccEEEEEEECCCc-chhhccccCCeEEEecCCCCCccc-----------------c-----c
Confidence            345554 356788999999999999999999 999999999999999999887311                 1     1


Q ss_pred             CCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe
Q psy17682        106 GANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS  185 (490)
Q Consensus       106 ~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~  185 (490)
                      -..+...|.+++|.|-....-...+++++.||.++||+..        ...++..+.||+.+|+|++|--  +.++++|+
T Consensus       196 l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~--------~~~~~~~lsgHT~~VTCvrwGG--~gliySgS  265 (480)
T KOG0271|consen  196 LRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTK--------LGTCVRTLSGHTASVTCVRWGG--EGLIYSGS  265 (480)
T ss_pred             ccCcccceeEEeecccccCCCccceecccCCCCEEEEEcc--------CceEEEEeccCccceEEEEEcC--CceEEecC
Confidence            1224557899999888776666789999999999999985        4446778899999999999985  45999999


Q ss_pred             CCCcEEEEECCCCCcccccccceeeecccccCEEEEEEe-----------eCCC------------------------CE
Q psy17682        186 EDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWH-----------PTAQ------------------------NV  230 (490)
Q Consensus       186 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----------p~~~------------------------~~  230 (490)
                      .|++|++|+...|.+.+.       +.+|...|+.++.+           |.+.                        ..
T Consensus       266 ~DrtIkvw~a~dG~~~r~-------lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~er  338 (480)
T KOG0271|consen  266 QDRTIKVWRALDGKLCRE-------LKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGER  338 (480)
T ss_pred             CCceEEEEEccchhHHHh-------hcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcce
Confidence            999999999999888776       55699999998876           2222                        25


Q ss_pred             EEEEeCCCcEEEEECCC-CeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEE
Q psy17682        231 LLTAGSDNNVAIWNVGT-GEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIY  309 (490)
Q Consensus       231 l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  309 (490)
                      |++|+.|.++.+|+... .+++..+.+|..-|+.+.|+||++++++++.|..|++||-++|+.+.++.+|-.. ++.++|
T Consensus       339 lVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~-VYqvaw  417 (480)
T KOG0271|consen  339 LVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAA-VYQVAW  417 (480)
T ss_pred             eEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccce-eEEEEe
Confidence            99999999999999764 4588889999999999999999999999999999999999999999999999986 999999


Q ss_pred             eCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEE
Q psy17682        310 LKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFE  377 (490)
Q Consensus       310 s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd  377 (490)
                      +.|.++|++|+   .|.++++|++++.+.  .....+|...|..+.|+|||+.+ ++|+.|..+++|.
T Consensus       418 saDsRLlVS~S---kDsTLKvw~V~tkKl--~~DLpGh~DEVf~vDwspDG~rV-~sggkdkv~~lw~  479 (480)
T KOG0271|consen  418 SADSRLLVSGS---KDSTLKVWDVRTKKL--KQDLPGHADEVFAVDWSPDGQRV-ASGGKDKVLRLWR  479 (480)
T ss_pred             ccCccEEEEcC---CCceEEEEEeeeeee--cccCCCCCceEEEEEecCCCcee-ecCCCceEEEeec
Confidence            99999999999   799999999997652  22334588889999999999998 8999999999995

>KOG0272|consensus

Probab=100.00  E-value=2.6e-43  Score=309.20  Aligned_cols=284  Identities=20%  Similarity=0.222  Sum_probs=247.3

Q ss_pred             ccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecc
Q psy17682         41 LYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISE  120 (490)
Q Consensus        41 ~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  120 (490)
                      .|-+.+|..+.|++++ +.|+|||-+|.+++|+..+..                                          
T Consensus       172 ~gd~rPis~~~fS~ds-~~laT~swsG~~kvW~~~~~~------------------------------------------  208 (459)
T KOG0272|consen  172 VGDTRPISGCSFSRDS-KHLATGSWSGLVKVWSVPQCN------------------------------------------  208 (459)
T ss_pred             ccCCCcceeeEeecCC-CeEEEeecCCceeEeecCCcc------------------------------------------
Confidence            4677889999999999 999999999999999876632                                          


Q ss_pred             ccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCC-CCCEEEEEeCCCcEEEEECCCCC
Q psy17682        121 DYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPH-DDNVIASGSEDCVVKVWQIPDGG  199 (490)
Q Consensus       121 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~-~~~~l~s~~~dg~i~iwd~~~~~  199 (490)
                                                          ..+++.||...|.++.|+|. ....+|||+.||++++|++.+..
T Consensus       209 ------------------------------------~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~  252 (459)
T KOG0272|consen  209 ------------------------------------LLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQET  252 (459)
T ss_pred             ------------------------------------eeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCc
Confidence                                                23467899999999999997 35799999999999999998775


Q ss_pred             cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC
Q psy17682        200 ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD  279 (490)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  279 (490)
                      .+..       +.+|...|..++|+|+|+ +|++++.|.+-++||+++++.+....+|...|.+++|+|||.++++|+.|
T Consensus       253 ~l~~-------l~gH~~RVs~VafHPsG~-~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD  324 (459)
T KOG0272|consen  253 PLQD-------LEGHLARVSRVAFHPSGK-FLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLD  324 (459)
T ss_pred             chhh-------hhcchhhheeeeecCCCc-eeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCcc
Confidence            5554       667999999999999996 99999999999999999999998889999999999999999999999999


Q ss_pred             CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCC
Q psy17682        280 KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPD  359 (490)
Q Consensus       280 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~  359 (490)
                      ..-+|||+|++.++..+.+|... |..+.|+|+|..|++|+   .|++++|||++....  ......|.+-|+.+.|+|.
T Consensus       325 ~~~RvWDlRtgr~im~L~gH~k~-I~~V~fsPNGy~lATgs---~Dnt~kVWDLR~r~~--ly~ipAH~nlVS~Vk~~p~  398 (459)
T KOG0272|consen  325 SLGRVWDLRTGRCIMFLAGHIKE-ILSVAFSPNGYHLATGS---SDNTCKVWDLRMRSE--LYTIPAHSNLVSQVKYSPQ  398 (459)
T ss_pred             chhheeecccCcEEEEecccccc-eeeEeECCCceEEeecC---CCCcEEEeeeccccc--ceecccccchhhheEeccc
Confidence            99999999999999999999886 99999999999999999   799999999997665  3333467788999999995


Q ss_pred             CCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEE
Q psy17682        360 TNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFR  420 (490)
Q Consensus       360 ~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~  420 (490)
                      ..+++++++.|++++||...+.++. +.+.  +|.+.|.++..+||+.+++++  +..+++|.
T Consensus       399 ~g~fL~TasyD~t~kiWs~~~~~~~-ksLa--GHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  399 EGYFLVTASYDNTVKIWSTRTWSPL-KSLA--GHEGKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             CCeEEEEcccCcceeeecCCCcccc-hhhc--CCccceEEEEeccCCceEEEeccCceeeecc
Confidence            4444489999999999999998843 2232  455789999999999998887  44677774

>KOG0286|consensus

Probab=100.00  E-value=6.5e-41  Score=280.85  Aligned_cols=294  Identities=17%  Similarity=0.209  Sum_probs=250.8

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      ...+|+||...|.++.|+++. +.|+|+|.||.+.|||.-+...                                    
T Consensus        47 ~rr~LkGH~~Ki~~~~ws~Ds-r~ivSaSqDGklIvWDs~TtnK------------------------------------   89 (343)
T KOG0286|consen   47 TRRTLKGHLNKIYAMDWSTDS-RRIVSASQDGKLIVWDSFTTNK------------------------------------   89 (343)
T ss_pred             eEEEecccccceeeeEecCCc-CeEEeeccCCeEEEEEcccccc------------------------------------
Confidence            347899999999999999999 9999999999999999876431                                    


Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI  195 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~  195 (490)
                                             +..                   +.-....|..++|+|.| +++|.|+.|+...||++
T Consensus        90 -----------------------~ha-------------------ipl~s~WVMtCA~sPSg-~~VAcGGLdN~Csiy~l  126 (343)
T KOG0286|consen   90 -----------------------VHA-------------------IPLPSSWVMTCAYSPSG-NFVACGGLDNKCSIYPL  126 (343)
T ss_pred             -----------------------eeE-------------------EecCceeEEEEEECCCC-CeEEecCcCceeEEEec
Confidence                                   001                   11235689999999998 99999999999999999


Q ss_pred             CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC-CCCEEE
Q psy17682        196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW-DGSKLL  274 (490)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~  274 (490)
                      .+...... ......+.+|.+.+.|+.|-+++  .|++++.|.+..+||+++++.+..|.+|.+.|.+++++| +++.++
T Consensus       127 s~~d~~g~-~~v~r~l~gHtgylScC~f~dD~--~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFv  203 (343)
T KOG0286|consen  127 STRDAEGN-VRVSRELAGHTGYLSCCRFLDDN--HILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFV  203 (343)
T ss_pred             cccccccc-ceeeeeecCccceeEEEEEcCCC--ceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEE
Confidence            85522111 12234578899999999999975  689999999999999999999999999999999999999 999999


Q ss_pred             EEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeee
Q psy17682        275 TTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFP  354 (490)
Q Consensus       275 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~  354 (490)
                      +|+-|+..++||+|.+.+.+++.+|... |..+.|.|+|.-+++|+   .|++.++||++...+...+.......+|+++
T Consensus       204 Sg~cD~~aklWD~R~~~c~qtF~ghesD-INsv~ffP~G~afatGS---DD~tcRlyDlRaD~~~a~ys~~~~~~gitSv  279 (343)
T KOG0286|consen  204 SGGCDKSAKLWDVRSGQCVQTFEGHESD-INSVRFFPSGDAFATGS---DDATCRLYDLRADQELAVYSHDSIICGITSV  279 (343)
T ss_pred             ecccccceeeeeccCcceeEeecccccc-cceEEEccCCCeeeecC---CCceeEEEeecCCcEEeeeccCcccCCceeE
Confidence            9999999999999999999999999986 99999999999999999   6899999999987765555544455679999


Q ss_pred             eecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEE
Q psy17682        355 LYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFR  420 (490)
Q Consensus       355 ~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~  420 (490)
                      +||..|++| .+|..|.++.+||.-.++. ...+  ..|...|.++..+|||..++++  +..+|+|.
T Consensus       280 ~FS~SGRlL-fagy~d~~c~vWDtlk~e~-vg~L--~GHeNRvScl~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  280 AFSKSGRLL-FAGYDDFTCNVWDTLKGER-VGVL--AGHENRVSCLGVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             EEcccccEE-EeeecCCceeEeeccccce-EEEe--eccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence            999999999 5788999999999998872 2223  3566799999999999998887  56888883

>KOG0279|consensus

Probab=100.00  E-value=9.3e-41  Score=278.25  Aligned_cols=295  Identities=15%  Similarity=0.204  Sum_probs=244.0

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      ...+|+||++.|+.++-.+.+..++++++.|.++.+|++.....                                    
T Consensus         7 l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~------------------------------------   50 (315)
T KOG0279|consen    7 LRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDI------------------------------------   50 (315)
T ss_pred             eeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCcc------------------------------------
Confidence            45579999999999999999889999999999999999986321                                    


Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI  195 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~  195 (490)
                                                        +   .....+.+.||+..|..+..+++| ++.++++.|+++++||+
T Consensus        51 ----------------------------------~---~G~~~r~~~GHsH~v~dv~~s~dg-~~alS~swD~~lrlWDl   92 (315)
T KOG0279|consen   51 ----------------------------------K---YGVPVRRLTGHSHFVSDVVLSSDG-NFALSASWDGTLRLWDL   92 (315)
T ss_pred             ----------------------------------c---cCceeeeeeccceEecceEEccCC-ceEEeccccceEEEEEe
Confidence                                              0   111344678999999999999998 89999999999999999


Q ss_pred             CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec--CCCcEEEEEEcCC--CC
Q psy17682        196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC--HPDIVYSASWNWD--GS  271 (490)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~--~~  271 (490)
                      .+++..+.       +.+|...|.+++|+++.+ .+++|+.|.+|++|+.... +..++..  +.+.|.|+.|+|+  ..
T Consensus        93 ~~g~~t~~-------f~GH~~dVlsva~s~dn~-qivSGSrDkTiklwnt~g~-ck~t~~~~~~~~WVscvrfsP~~~~p  163 (315)
T KOG0279|consen   93 ATGESTRR-------FVGHTKDVLSVAFSTDNR-QIVSGSRDKTIKLWNTLGV-CKYTIHEDSHREWVSCVRFSPNESNP  163 (315)
T ss_pred             cCCcEEEE-------EEecCCceEEEEecCCCc-eeecCCCcceeeeeeeccc-EEEEEecCCCcCcEEEEEEcCCCCCc
Confidence            99866554       667999999999999985 9999999999999998654 4444442  3788999999997  67


Q ss_pred             EEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCce
Q psy17682        272 KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGV  351 (490)
Q Consensus       272 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i  351 (490)
                      +|++++.|+++++||+++.+....+.+|.+. ++.+++||||.+.++|+   .++.+.+||++.+++   ...+++...|
T Consensus       164 ~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~-v~t~~vSpDGslcasGg---kdg~~~LwdL~~~k~---lysl~a~~~v  236 (315)
T KOG0279|consen  164 IIVSASWDKTVKVWNLRNCQLRTTFIGHSGY-VNTVTVSPDGSLCASGG---KDGEAMLWDLNEGKN---LYSLEAFDIV  236 (315)
T ss_pred             EEEEccCCceEEEEccCCcchhhcccccccc-EEEEEECCCCCEEecCC---CCceEEEEEccCCce---eEeccCCCeE
Confidence            9999999999999999999999999999986 99999999999999998   799999999998775   5566788899


Q ss_pred             eeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC-----C-ceeeEEEeeCceeEEee--cceeEEEEec
Q psy17682        352 MFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP-----D-PQRGIGMMPKRGCDVNS--CEIGRFFRLN  422 (490)
Q Consensus       352 ~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~-----~-~i~~~~~sp~~~~l~~~--~~~~~~~~~~  422 (490)
                      .+++|+|+.-.| + ...+..|+|||+.++..+........+.     . ...+++|++||..|.++  ++.+|+|.+.
T Consensus       237 ~sl~fspnrywL-~-~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~  313 (315)
T KOG0279|consen  237 NSLCFSPNRYWL-C-AATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA  313 (315)
T ss_pred             eeEEecCCceeE-e-eccCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence            999999987666 3 3456669999999876332221111111     2 24788999999999988  5577888764

>KOG0272|consensus

Probab=100.00  E-value=2e-42  Score=303.66  Aligned_cols=279  Identities=18%  Similarity=0.255  Sum_probs=243.0

Q ss_pred             CCccCCccccchhhHh--hheee-------eeeeccCCCCCcEEecccccceeeeEEeccC-CCceEEeeeCCCeEEEEe
Q psy17682          4 PDTVGDTAALTADEWF--AVLFR-------LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPT-AQNVLLTAGKEAEPILIS   73 (490)
Q Consensus         4 ~~~~~~~~~~~~~~~~--~~~~~-------~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~-~~~~l~s~~~D~~v~iWd   73 (490)
                      =.++|++++++.=.+-  +.++-       ...|+.... ..+.+|.||++.|.++.|+|. ....+|||+.||++++|+
T Consensus       169 ~SQ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~-~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~  247 (459)
T KOG0272|consen  169 CSQVGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQC-NLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWK  247 (459)
T ss_pred             hhhccCCCcceeeEeecCCCeEEEeecCCceeEeecCCc-ceeEEEeccccceeeEEEccCCCccceeeeccCCceeeec
Confidence            3577888887665442  22222       344555555 788899999999999999998 457899999999999998


Q ss_pred             CCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCccc
Q psy17682         74 LKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGR  153 (490)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~  153 (490)
                      +.+..                                                                           
T Consensus       248 ~~~e~---------------------------------------------------------------------------  252 (459)
T KOG0272|consen  248 LSQET---------------------------------------------------------------------------  252 (459)
T ss_pred             cCCCc---------------------------------------------------------------------------
Confidence            87632                                                                           


Q ss_pred             CCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEE
Q psy17682        154 INADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLT  233 (490)
Q Consensus       154 ~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s  233 (490)
                         .+..+.||...|..++|+|+| .+|+|++.|.+-++||++++..+..       ..||...|.+++|+|+|. ++++
T Consensus       253 ---~l~~l~gH~~RVs~VafHPsG-~~L~TasfD~tWRlWD~~tk~ElL~-------QEGHs~~v~~iaf~~DGS-L~~t  320 (459)
T KOG0272|consen  253 ---PLQDLEGHLARVSRVAFHPSG-KFLGTASFDSTWRLWDLETKSELLL-------QEGHSKGVFSIAFQPDGS-LAAT  320 (459)
T ss_pred             ---chhhhhcchhhheeeeecCCC-ceeeecccccchhhcccccchhhHh-------hcccccccceeEecCCCc-eeec
Confidence               223567999999999999999 8999999999999999999877654       457999999999999996 9999


Q ss_pred             EeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeC-C
Q psy17682        234 AGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLK-S  312 (490)
Q Consensus       234 ~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~-~  312 (490)
                      ||.|..-+|||++++.++..+.+|..+|.+++|+|+|..|+||+.|++++|||++..+.+.++.+|.+- |+.+.|+| .
T Consensus       321 GGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nl-VS~Vk~~p~~  399 (459)
T KOG0272|consen  321 GGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNL-VSQVKYSPQE  399 (459)
T ss_pred             cCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccch-hhheEecccC
Confidence            999999999999999999999999999999999999999999999999999999999999999999986 99999999 5


Q ss_pred             CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEE
Q psy17682        313 GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFE  377 (490)
Q Consensus       313 ~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd  377 (490)
                      |.+|++++   .|++++||..++..+...+  .+|...|.++..++|++++ ++++.|.++++|.
T Consensus       400 g~fL~Tas---yD~t~kiWs~~~~~~~ksL--aGHe~kV~s~Dis~d~~~i-~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  400 GYFLVTAS---YDNTVKIWSTRTWSPLKSL--AGHEGKVISLDISPDSQAI-ATSSFDRTIKLWR  458 (459)
T ss_pred             CeEEEEcc---cCcceeeecCCCcccchhh--cCCccceEEEEeccCCceE-EEeccCceeeecc
Confidence            89999998   7999999999987754433  3688889999999999999 8999999999995

>KOG0273|consensus

Probab=100.00  E-value=4.3e-39  Score=286.36  Aligned_cols=343  Identities=15%  Similarity=0.215  Sum_probs=279.8

Q ss_pred             CCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccC--CCCCccc
Q psy17682         33 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGG--KGGANRN  110 (490)
Q Consensus        33 ~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  110 (490)
                      .+.....+.+|..+|.+.+|+|....+|++++.|-+.++|++.......+.    .       ..+.....  ......+
T Consensus       167 I~~~~~kvl~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~----q-------~~lrh~~~~~~~s~~~n  235 (524)
T KOG0273|consen  167 IPSSKAKVLRHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGST----Q-------LVLRHCIREGGKSVPSN  235 (524)
T ss_pred             ccccceeeccCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccch----h-------hhhhhhhhhhcccCCcc
Confidence            344444555699999999999998669999999999999998752211100    0       00000010  1123345


Q ss_pred             ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcE
Q psy17682        111 STANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVV  190 (490)
Q Consensus       111 ~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i  190 (490)
                      +.|++++|+.++     ..++++..+|.+++|+..         ...+.++..|+++|.++.|+..| ++|++++.|+++
T Consensus       236 kdVT~L~Wn~~G-----~~LatG~~~G~~riw~~~---------G~l~~tl~~HkgPI~slKWnk~G-~yilS~~vD~tt  300 (524)
T KOG0273|consen  236 KDVTSLDWNNDG-----TLLATGSEDGEARIWNKD---------GNLISTLGQHKGPIFSLKWNKKG-TYILSGGVDGTT  300 (524)
T ss_pred             CCcceEEecCCC-----CeEEEeecCcEEEEEecC---------chhhhhhhccCCceEEEEEcCCC-CEEEeccCCccE
Confidence            679999999886     578999999999999975         33566888999999999999988 999999999999


Q ss_pred             EEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC
Q psy17682        191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG  270 (490)
Q Consensus       191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~  270 (490)
                      .+||..++.....+.       .|..+-..+.|-.+.  -|++++.|+.|+|+.+....++.++.+|.++|.++.|+|.+
T Consensus       301 ilwd~~~g~~~q~f~-------~~s~~~lDVdW~~~~--~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg  371 (524)
T KOG0273|consen  301 ILWDAHTGTVKQQFE-------FHSAPALDVDWQSND--EFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTG  371 (524)
T ss_pred             EEEeccCceEEEeee-------eccCCccceEEecCc--eEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCC
Confidence            999998887655443       377777889998776  59999999999999999999999999999999999999999


Q ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCC---------cEEEEEeCCCceeEEEEecCCCCCCCeE
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG---------LIFTTGFSKMSERQYSLRAPDHLDEPIV  341 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~---------~~l~~~~~~~~~~~i~iwd~~~~~~~~~  341 (490)
                      .+|++++.|++++||..........+..|... |+.+.|+|.|         ..+++++   .|++|++||...+.+...
T Consensus       372 ~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hske-i~t~~wsp~g~v~~n~~~~~~l~sas---~dstV~lwdv~~gv~i~~  447 (524)
T KOG0273|consen  372 SLLASCSDDGTLKIWSMGQSNSVHDLQAHSKE-IYTIKWSPTGPVTSNPNMNLMLASAS---FDSTVKLWDVESGVPIHT  447 (524)
T ss_pred             ceEEEecCCCeeEeeecCCCcchhhhhhhccc-eeeEeecCCCCccCCCcCCceEEEee---cCCeEEEEEccCCceeEe
Confidence            99999999999999999999888999999886 9999999863         4666666   699999999998775443


Q ss_pred             EEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEE
Q psy17682        342 MVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFF  419 (490)
Q Consensus       342 ~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~  419 (490)
                      +  ..|..+|.+++|+|+|+++ ++|+.||.|.+|+.++++    .+..+...+.|..++|+.+|..+...  ++.+.+.
T Consensus       448 f--~kH~~pVysvafS~~g~yl-AsGs~dg~V~iws~~~~~----l~~s~~~~~~Ifel~Wn~~G~kl~~~~sd~~vcvl  520 (524)
T KOG0273|consen  448 L--MKHQEPVYSVAFSPNGRYL-ASGSLDGCVHIWSTKTGK----LVKSYQGTGGIFELCWNAAGDKLGACASDGSVCVL  520 (524)
T ss_pred             e--ccCCCceEEEEecCCCcEE-EecCCCCeeEeccccchh----eeEeecCCCeEEEEEEcCCCCEEEEEecCCCceEE
Confidence            3  3788899999999999999 899999999999999997    66677777889999999999776554  4455555


Q ss_pred             Ee
Q psy17682        420 RL  421 (490)
Q Consensus       420 ~~  421 (490)
                      ++
T Consensus       521 dl  522 (524)
T KOG0273|consen  521 DL  522 (524)
T ss_pred             Ee
Confidence            54

>KOG0315|consensus

Probab=100.00  E-value=4.6e-37  Score=252.02  Aligned_cols=276  Identities=17%  Similarity=0.234  Sum_probs=229.6

Q ss_pred             CCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEEEeeCC
Q psy17682         56 AQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKS  135 (490)
Q Consensus        56 ~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~  135 (490)
                      .+-+|+|+|.|-+||+|...+|..                  ...+.+.     ...|+.+.+.|+.      ...+++.
T Consensus         9 ~~viLvsA~YDhTIRfWqa~tG~C------------------~rTiqh~-----dsqVNrLeiTpdk------~~LAaa~   59 (311)
T KOG0315|consen    9 DPVILVSAGYDHTIRFWQALTGIC------------------SRTIQHP-----DSQVNRLEITPDK------KDLAAAG   59 (311)
T ss_pred             CceEEEeccCcceeeeeehhcCeE------------------EEEEecC-----ccceeeEEEcCCc------chhhhcc
Confidence            347899999999999999998762                  2222332     3368999999994      3334677


Q ss_pred             CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccc
Q psy17682        136 QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQ  215 (490)
Q Consensus       136 ~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  215 (490)
                      ...|++|++....      ..++.++.+|++.|+++.|..+| +.+++|++||+++|||++...+.+.+.        |.
T Consensus        60 ~qhvRlyD~~S~n------p~Pv~t~e~h~kNVtaVgF~~dg-rWMyTgseDgt~kIWdlR~~~~qR~~~--------~~  124 (311)
T KOG0315|consen   60 NQHVRLYDLNSNN------PNPVATFEGHTKNVTAVGFQCDG-RWMYTGSEDGTVKIWDLRSLSCQRNYQ--------HN  124 (311)
T ss_pred             CCeeEEEEccCCC------CCceeEEeccCCceEEEEEeecC-eEEEecCCCceEEEEeccCcccchhcc--------CC
Confidence            8899999996322      22677899999999999999998 899999999999999999877766554        88


Q ss_pred             cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc---
Q psy17682        216 RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGA---  291 (490)
Q Consensus       216 ~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---  291 (490)
                      .+|+++..+|+.. -|++|..+|.|++||+.+..+.+.+. .....|.++...|||.+++.+...|..++|++-+..   
T Consensus       125 spVn~vvlhpnQt-eLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s  203 (311)
T KOG0315|consen  125 SPVNTVVLHPNQT-ELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTAS  203 (311)
T ss_pred             CCcceEEecCCcc-eEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccc
Confidence            9999999999975 89999999999999999887666554 445789999999999999999999999999997643   


Q ss_pred             ---eeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEec
Q psy17682        292 ---IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK  368 (490)
Q Consensus       292 ---~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~  368 (490)
                         ++..++.|.+. +..+.+||++++|++++   .|.+++||+.++. .........|...++.++||.||+|| ++|+
T Consensus       204 ~l~P~~k~~ah~~~-il~C~lSPd~k~lat~s---sdktv~iwn~~~~-~kle~~l~gh~rWvWdc~FS~dg~Yl-vTas  277 (311)
T KOG0315|consen  204 ELEPVHKFQAHNGH-ILRCLLSPDVKYLATCS---SDKTVKIWNTDDF-FKLELVLTGHQRWVWDCAFSADGEYL-VTAS  277 (311)
T ss_pred             cceEhhheecccce-EEEEEECCCCcEEEeec---CCceEEEEecCCc-eeeEEEeecCCceEEeeeeccCccEE-EecC
Confidence               45566778775 89999999999999998   7999999999986 23333444666789999999999999 8999


Q ss_pred             CCCeEEEEEecCCC
Q psy17682        369 GDSVIRYFEITAEP  382 (490)
Q Consensus       369 ~dg~i~iwd~~~~~  382 (490)
                      .|+.+++|++..++
T Consensus       278 sd~~~rlW~~~~~k  291 (311)
T KOG0315|consen  278 SDHTARLWDLSAGK  291 (311)
T ss_pred             CCCceeecccccCc
Confidence            99999999999998

>KOG0318|consensus

Probab=100.00  E-value=2.8e-36  Score=271.97  Aligned_cols=367  Identities=13%  Similarity=0.153  Sum_probs=272.5

Q ss_pred             CCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCC------CCCCC----------Ccccccee-cccc
Q psy17682         33 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGY------IPPSE----------KSKSALKV-TKRS   95 (490)
Q Consensus        33 ~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~------~~~~~----------~~~~~~~~-~~~~   95 (490)
                      .......+.+|...++...|+|.| .+++||...|.|||||....+      ++...          +.+....+ ..+.
T Consensus        48 ~~~~~~iYtEH~~~vtVAkySPsG-~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGre  126 (603)
T KOG0318|consen   48 NPASVDIYTEHAHQVTVAKYSPSG-FYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRE  126 (603)
T ss_pred             CccceeeeccccceeEEEEeCCCc-eEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCcc
Confidence            344467789999999999999999 899999999999999987632      11100          00000000 0011


Q ss_pred             ceeecccC------CCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCee
Q psy17682         96 NVLDKVGG------KGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVL  169 (490)
Q Consensus        96 ~~~~~~~~------~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~  169 (490)
                      +......-      .+-..+.+.+++++|-|..    .--+++++.|+.+.+|+=.        ..+-..+++.|..-|.
T Consensus       127 rfg~~F~~DSG~SvGei~GhSr~ins~~~KpsR----PfRi~T~sdDn~v~ffeGP--------PFKFk~s~r~HskFV~  194 (603)
T KOG0318|consen  127 RFGHVFLWDSGNSVGEITGHSRRINSVDFKPSR----PFRIATGSDDNTVAFFEGP--------PFKFKSSFREHSKFVN  194 (603)
T ss_pred             ceeEEEEecCCCccceeeccceeEeeeeccCCC----ceEEEeccCCCeEEEeeCC--------Ceeeeeccccccccee
Confidence            11100000      0012345577777776663    2347788899999998643        2223446678999999


Q ss_pred             EEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe
Q psy17682        170 DIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE  249 (490)
Q Consensus       170 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~  249 (490)
                      |+.|+||| .++++++.||+|.+||=.+++.+..+..    -.+|++.|..++|+||+. .+++++.|.+++|||+.+.+
T Consensus       195 ~VRysPDG-~~Fat~gsDgki~iyDGktge~vg~l~~----~~aHkGsIfalsWsPDs~-~~~T~SaDkt~KIWdVs~~s  268 (603)
T KOG0318|consen  195 CVRYSPDG-SRFATAGSDGKIYIYDGKTGEKVGELED----SDAHKGSIFALSWSPDST-QFLTVSADKTIKIWDVSTNS  268 (603)
T ss_pred             eEEECCCC-CeEEEecCCccEEEEcCCCccEEEEecC----CCCccccEEEEEECCCCc-eEEEecCCceEEEEEeeccc
Confidence            99999998 8999999999999999999988877653    446999999999999996 89999999999999987543


Q ss_pred             eE-------------------------------------------EEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy17682        250 IM-------------------------------------------IQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIIN  286 (490)
Q Consensus       250 ~~-------------------------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd  286 (490)
                      ++                                           ..+.+|...|+++..+|++++|++|+.||.|.-||
T Consensus       269 lv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~  348 (603)
T KOG0318|consen  269 LVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWD  348 (603)
T ss_pred             eEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEe
Confidence            22                                           23446888899999999999999999999999999


Q ss_pred             CCCCceee-----------eeeecC-------------------------------------------------------
Q psy17682        287 PRTGAIEE-----------EAVCHE-------------------------------------------------------  300 (490)
Q Consensus       287 ~~~~~~~~-----------~~~~~~-------------------------------------------------------  300 (490)
                      ..++..-+           .+..+.                                                       
T Consensus       349 ~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~i  428 (603)
T KOG0318|consen  349 SGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDI  428 (603)
T ss_pred             cCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcE
Confidence            87653211           110000                                                       


Q ss_pred             --------------CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEE
Q psy17682        301 --------------GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLC  366 (490)
Q Consensus       301 --------------~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  366 (490)
                                    +....+++++|++..+++|+   .|+.+++|.+.............|...|+.++||||+.+| ++
T Consensus       429 v~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG---~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yl-a~  504 (603)
T KOG0318|consen  429 VLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGG---QDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYL-AA  504 (603)
T ss_pred             EEEecCCcceeeccccccceEEEcCCCCEEEEec---ccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEE-EE
Confidence                          01126788999999999998   7899999999976644444556788999999999999999 88


Q ss_pred             ecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCceeEEeec--ceeEEEEecCCC
Q psy17682        367 GKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGCDVNSC--EIGRFFRLNNSG  425 (490)
Q Consensus       367 g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~~~~  425 (490)
                      |...+.+.+||+.+.+.   ....+. |...|.+++|+|+..++++++  ..+.+|.+....
T Consensus       505 ~Da~rkvv~yd~~s~~~---~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~  563 (603)
T KOG0318|consen  505 GDASRKVVLYDVASREV---KTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPA  563 (603)
T ss_pred             eccCCcEEEEEcccCce---ecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChh
Confidence            99999999999999874   222333 667899999999999999884  466777776543

>KOG0645|consensus

Probab=100.00  E-value=4.9e-37  Score=254.99  Aligned_cols=297  Identities=21%  Similarity=0.276  Sum_probs=234.9

Q ss_pred             CcEEecccccceeeeEEeccC-CCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPT-AQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~-~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      .....+.||.++|..++|+|- | .+|||||.|+.||||+...+.                 .+..+  ..-...+.+.|
T Consensus         5 ~~~~~~~gh~~r~W~~awhp~~g-~ilAscg~Dk~vriw~~~~~~-----------------s~~ck--~vld~~hkrsV   64 (312)
T KOG0645|consen    5 ILEQKLSGHKDRVWSVAWHPGKG-VILASCGTDKAVRIWSTSSGD-----------------SWTCK--TVLDDGHKRSV   64 (312)
T ss_pred             eeEEeecCCCCcEEEEEeccCCc-eEEEeecCCceEEEEecCCCC-----------------cEEEE--Eeccccchhee
Confidence            356779999999999999998 6 799999999999999988532                 11111  01112467789


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                      ++++|+|.+     .++++++.|.++.||.-.      ....+...+++||+..|.|++|+++| ++||+++.|..|-||
T Consensus        65 RsvAwsp~g-----~~La~aSFD~t~~Iw~k~------~~efecv~~lEGHEnEVK~Vaws~sG-~~LATCSRDKSVWiW  132 (312)
T KOG0645|consen   65 RSVAWSPHG-----RYLASASFDATVVIWKKE------DGEFECVATLEGHENEVKCVAWSASG-NYLATCSRDKSVWIW  132 (312)
T ss_pred             eeeeecCCC-----cEEEEeeccceEEEeecC------CCceeEEeeeeccccceeEEEEcCCC-CEEEEeeCCCeEEEE
Confidence            999999996     478899999999999753      33345688999999999999999998 899999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC---CCeeEEEEecCCCcEEEEEEcCCC
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG---TGEIMIQIECHPDIVYSASWNWDG  270 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~---~~~~~~~~~~~~~~v~~~~~~~~~  270 (490)
                      .+..+....    ....+..|...|..+.|+|... +|++++.|++|++|+-.   .-++++++.+|...|.+++|++.|
T Consensus       133 e~deddEfe----c~aVL~~HtqDVK~V~WHPt~d-lL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G  207 (312)
T KOG0645|consen  133 EIDEDDEFE----CIAVLQEHTQDVKHVIWHPTED-LLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIG  207 (312)
T ss_pred             EecCCCcEE----EEeeeccccccccEEEEcCCcc-eeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCC
Confidence            998655432    2344777999999999999986 99999999999999876   335888999999999999999999


Q ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeee-ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC-CC----eEEEe
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIEEEAV-CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD-EP----IVMVE  344 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~-~~----~~~~~  344 (490)
                      ..|++++.|++++||-..+.     +. .|.. .++.+.|. + -.+++++   .|+.|+++...... .+    .....
T Consensus       208 ~rl~s~sdD~tv~Iw~~~~~-----~~~~~sr-~~Y~v~W~-~-~~IaS~g---gD~~i~lf~~s~~~d~p~~~l~~~~~  276 (312)
T KOG0645|consen  208 SRLVSCSDDGTVSIWRLYTD-----LSGMHSR-ALYDVPWD-N-GVIASGG---GDDAIRLFKESDSPDEPSWNLLAKKE  276 (312)
T ss_pred             ceEEEecCCcceEeeeeccC-----cchhccc-ceEeeeec-c-cceEecc---CCCEEEEEEecCCCCCchHHHHHhhh
Confidence            99999999999999986622     22 2333 48888888 4 4566666   58889998765421 11    11123


Q ss_pred             ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        345 LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       345 ~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      ..|...|+++.|.|.+..++++|+.||.|++|.+.
T Consensus       277 ~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~  311 (312)
T KOG0645|consen  277 GAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE  311 (312)
T ss_pred             cccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence            34666899999999644444899999999999875

>KOG0279|consensus

Probab=100.00  E-value=4.3e-37  Score=256.44  Aligned_cols=261  Identities=16%  Similarity=0.217  Sum_probs=225.8

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      ..++++|++.|..++..+.+...+++++.|.++.+|++....  ..+..+...+.||...|..+..+++|. +.++++.|
T Consensus         8 ~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd--~~~G~~~r~~~GHsH~v~dv~~s~dg~-~alS~swD   84 (315)
T KOG0279|consen    8 RGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDD--IKYGVPVRRLTGHSHFVSDVVLSSDGN-FALSASWD   84 (315)
T ss_pred             eeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCc--cccCceeeeeeccceEecceEEccCCc-eEEecccc
Confidence            447889999999999999888999999999999999987652  345567778999999999999999994 99999999


Q ss_pred             CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecC-CCceeEEEEeCC--Cc
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHE-GSKATRAIYLKS--GL  314 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~s~~--~~  314 (490)
                      +++++||+.+++..+.|.+|...|.+++|++|.+.+++|+.|.+|++|++-.. +..++..+. ...+.++.|+|+  ..
T Consensus        85 ~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~-ck~t~~~~~~~~WVscvrfsP~~~~p  163 (315)
T KOG0279|consen   85 GTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGV-CKYTIHEDSHREWVSCVRFSPNESNP  163 (315)
T ss_pred             ceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeeccc-EEEEEecCCCcCcEEEEEEcCCCCCc
Confidence            99999999999999999999999999999999999999999999999998754 445555333 446999999999  67


Q ss_pred             EEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC
Q psy17682        315 IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP  394 (490)
Q Consensus       315 ~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~  394 (490)
                      ++++++   .|+++++||+++.+.  .....+|...++.+.+||||..+ ++|+.||.+.+||++.++    .+..+.+.
T Consensus       164 ~Ivs~s---~DktvKvWnl~~~~l--~~~~~gh~~~v~t~~vSpDGslc-asGgkdg~~~LwdL~~~k----~lysl~a~  233 (315)
T KOG0279|consen  164 IIVSAS---WDKTVKVWNLRNCQL--RTTFIGHSGYVNTVTVSPDGSLC-ASGGKDGEAMLWDLNEGK----NLYSLEAF  233 (315)
T ss_pred             EEEEcc---CCceEEEEccCCcch--hhccccccccEEEEEECCCCCEE-ecCCCCceEEEEEccCCc----eeEeccCC
Confidence            888887   799999999997653  33345677889999999999998 899999999999999998    56677788


Q ss_pred             CceeeEEEeeCceeEEee-cceeEEEEecCCCceEEEEE
Q psy17682        395 DPQRGIGMMPKRGCDVNS-CEIGRFFRLNNSGLCQVVSM  432 (490)
Q Consensus       395 ~~i~~~~~sp~~~~l~~~-~~~~~~~~~~~~~~~~~i~~  432 (490)
                      ..|.+++|+|+..+|..+ +..+++|++.+...++.+..
T Consensus       234 ~~v~sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l~~  272 (315)
T KOG0279|consen  234 DIVNSLCFSPNRYWLCAATATSIKIWDLESKAVVEELKL  272 (315)
T ss_pred             CeEeeEEecCCceeEeeccCCceEEEeccchhhhhhccc
Confidence            899999999999887766 55789999999886665543

>KOG0265|consensus

Probab=100.00  E-value=7.5e-37  Score=257.48  Aligned_cols=295  Identities=12%  Similarity=0.192  Sum_probs=247.7

Q ss_pred             CCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccc
Q psy17682         31 RTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRN  110 (490)
Q Consensus        31 ~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (490)
                      +.+..|.+.+.||.+.|.++.|+|+| .+|||||.|..|.+|+.....                                
T Consensus        34 s~l~ap~m~l~gh~geI~~~~F~P~g-s~~aSgG~Dr~I~LWnv~gdc--------------------------------   80 (338)
T KOG0265|consen   34 SSLQAPIMLLPGHKGEIYTIKFHPDG-SCFASGGSDRAIVLWNVYGDC--------------------------------   80 (338)
T ss_pred             ccccchhhhcCCCcceEEEEEECCCC-CeEeecCCcceEEEEeccccc--------------------------------
Confidence            34778889999999999999999988 999999999999999865422                                


Q ss_pred             ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcE
Q psy17682        111 STANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVV  190 (490)
Q Consensus       111 ~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i  190 (490)
                                                                   +...++++|+++|..+.|.+++ +.+++++.|.++
T Consensus        81 ---------------------------------------------eN~~~lkgHsgAVM~l~~~~d~-s~i~S~gtDk~v  114 (338)
T KOG0265|consen   81 ---------------------------------------------ENFWVLKGHSGAVMELHGMRDG-SHILSCGTDKTV  114 (338)
T ss_pred             ---------------------------------------------cceeeeccccceeEeeeeccCC-CEEEEecCCceE
Confidence                                                         0111356999999999999998 899999999999


Q ss_pred             EEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC
Q psy17682        191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG  270 (490)
Q Consensus       191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~  270 (490)
                      +.||.++|+.++.+.       +|..-|..+.-+.-|..++.+++.|+++++||+++.+.++++. .+.+++++.|..++
T Consensus       115 ~~wD~~tG~~~rk~k-------~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d~s  186 (338)
T KOG0265|consen  115 RGWDAETGKRIRKHK-------GHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKDTS  186 (338)
T ss_pred             EEEecccceeeehhc-------cccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEecccc
Confidence            999999999888744       5999999998776777788999999999999999999998887 57789999999999


Q ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeE----EEecc
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIV----MVELD  346 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~----~~~~~  346 (490)
                      ..+.+|+-|+.|++||++......++.+|... |+.+..+++|.++.+-+   .|.++++||++.......    +....
T Consensus       187 ~qv~sggIdn~ikvWd~r~~d~~~~lsGh~Dt-It~lsls~~gs~llsns---Md~tvrvwd~rp~~p~~R~v~if~g~~  262 (338)
T KOG0265|consen  187 DQVISGGIDNDIKVWDLRKNDGLYTLSGHADT-ITGLSLSRYGSFLLSNS---MDNTVRVWDVRPFAPSQRCVKIFQGHI  262 (338)
T ss_pred             cceeeccccCceeeeccccCcceEEeecccCc-eeeEEeccCCCcccccc---ccceEEEEEecccCCCCceEEEeecch
Confidence            99999999999999999999999999999986 99999999999998887   799999999986432222    12112


Q ss_pred             CC--CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEE
Q psy17682        347 TS--NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFR  420 (490)
Q Consensus       347 ~~--~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~  420 (490)
                      |.  .....++|+|+++++ .+|+.|..+++||..... ++-.+.  .+.+.|+.++|+|...++.+.+.+-++|.
T Consensus       263 hnfeknlL~cswsp~~~~i-~ags~dr~vyvwd~~~r~-~lyklp--Gh~gsvn~~~Fhp~e~iils~~sdk~i~l  334 (338)
T KOG0265|consen  263 HNFEKNLLKCSWSPNGTKI-TAGSADRFVYVWDTTSRR-ILYKLP--GHYGSVNEVDFHPTEPIILSCSSDKTIYL  334 (338)
T ss_pred             hhhhhhcceeeccCCCCcc-ccccccceEEEeeccccc-EEEEcC--CcceeEEEeeecCCCcEEEEeccCceeEe
Confidence            21  235678999999999 889999999999998865 222222  34578999999999999888776656653

>KOG0263|consensus

Probab=100.00  E-value=2.8e-37  Score=291.88  Aligned_cols=284  Identities=17%  Similarity=0.208  Sum_probs=231.1

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      +....++.--...++|..|++++ .+||.|-.|..|++|.++..++..-.          ....+.              
T Consensus       368 Sic~YT~~nt~~~v~ca~fSdds-smlA~Gf~dS~i~~~Sl~p~kl~~lk----------~~~~l~--------------  422 (707)
T KOG0263|consen  368 SICMYTFHNTYQGVTCAEFSDDS-SMLACGFVDSSVRVWSLTPKKLKKLK----------DASDLS--------------  422 (707)
T ss_pred             cEEEEEEEEcCCcceeEeecCCc-chhhccccccEEEEEecchhhhcccc----------chhhhc--------------
Confidence            44444555556789999999999 78888888999999999864321100          000000              


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                                     .+-..+.+-.+.+.+..        .....+++.||.++|.++.|+|+. ++|+++++|+++|+|
T Consensus       423 ---------------~~d~~sad~~~~~~D~~--------~~~~~~~L~GH~GPVyg~sFsPd~-rfLlScSED~svRLW  478 (707)
T KOG0263|consen  423 ---------------NIDTESADVDVDMLDDD--------SSGTSRTLYGHSGPVYGCSFSPDR-RFLLSCSEDSSVRLW  478 (707)
T ss_pred             ---------------cccccccchhhhhcccc--------CCceeEEeecCCCceeeeeecccc-cceeeccCCcceeee
Confidence                           00001111112222221        112344588999999999999988 899999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  273 (490)
                      .+.+..++..       +.+|..+|+++.|+|.| .+|||++.|++.++|.....++.+.+.+|-+.|.|+.|+|+..++
T Consensus       479 sl~t~s~~V~-------y~GH~~PVwdV~F~P~G-yYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~  550 (707)
T KOG0263|consen  479 SLDTWSCLVI-------YKGHLAPVWDVQFAPRG-YYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYV  550 (707)
T ss_pred             ecccceeEEE-------ecCCCcceeeEEecCCc-eEEEecCCCceeeeeecccCCchhhhcccccccceEEECCccccc
Confidence            9998876554       55799999999999999 699999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceee
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMF  353 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~  353 (490)
                      ++||.|.++|+||+.+|..++.+.+|.+. +.+++|||+|++|++|+   .++.|.+||+.++......  .+|.+.|.+
T Consensus       551 aTGSsD~tVRlWDv~~G~~VRiF~GH~~~-V~al~~Sp~Gr~LaSg~---ed~~I~iWDl~~~~~v~~l--~~Ht~ti~S  624 (707)
T KOG0263|consen  551 ATGSSDRTVRLWDVSTGNSVRIFTGHKGP-VTALAFSPCGRYLASGD---EDGLIKIWDLANGSLVKQL--KGHTGTIYS  624 (707)
T ss_pred             ccCCCCceEEEEEcCCCcEEEEecCCCCc-eEEEEEcCCCceEeecc---cCCcEEEEEcCCCcchhhh--hcccCceeE
Confidence            99999999999999999999999999986 99999999999999998   7999999999987654433  356788999


Q ss_pred             eeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        354 PLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       354 ~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      +.||.+|..| ++|+.|+.|++||+...
T Consensus       625 lsFS~dg~vL-asgg~DnsV~lWD~~~~  651 (707)
T KOG0263|consen  625 LSFSRDGNVL-ASGGADNSVRLWDLTKV  651 (707)
T ss_pred             EEEecCCCEE-EecCCCCeEEEEEchhh
Confidence            9999999999 89999999999998754

>KOG0285|consensus

Probab=100.00  E-value=1.1e-36  Score=262.06  Aligned_cols=293  Identities=16%  Similarity=0.156  Sum_probs=250.2

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      +....+.||.+.|.|+++.|.+ ..|+||+.|++++|||+.++.+.                                  
T Consensus       142 Kl~rVi~gHlgWVr~vavdP~n-~wf~tgs~DrtikIwDlatg~Lk----------------------------------  186 (460)
T KOG0285|consen  142 KLYRVISGHLGWVRSVAVDPGN-EWFATGSADRTIKIWDLATGQLK----------------------------------  186 (460)
T ss_pred             eehhhhhhccceEEEEeeCCCc-eeEEecCCCceeEEEEcccCeEE----------------------------------
Confidence            4456799999999999999997 99999999999999999987621                                  


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                                                                  .++.||...|..+++++.. .++++++.|+.|+.||
T Consensus       187 --------------------------------------------ltltGhi~~vr~vavS~rH-pYlFs~gedk~VKCwD  221 (460)
T KOG0285|consen  187 --------------------------------------------LTLTGHIETVRGVAVSKRH-PYLFSAGEDKQVKCWD  221 (460)
T ss_pred             --------------------------------------------EeecchhheeeeeeecccC-ceEEEecCCCeeEEEe
Confidence                                                        1456899999999999987 8999999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEE
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLL  274 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  274 (490)
                      ++.++.++.       +.+|-+.|.|++.+|.-+ .|++|+.|.+++|||+++...+..+.+|..+|..+.+.|....++
T Consensus       222 Le~nkvIR~-------YhGHlS~V~~L~lhPTld-vl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvi  293 (460)
T KOG0285|consen  222 LEYNKVIRH-------YHGHLSGVYCLDLHPTLD-VLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVI  293 (460)
T ss_pred             chhhhhHHH-------hccccceeEEEeccccce-eEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceE
Confidence            999988876       556999999999999986 999999999999999999999999999999999999999888999


Q ss_pred             EEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeee
Q psy17682        275 TTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFP  354 (490)
Q Consensus       275 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~  354 (490)
                      +|+.|++|++||++.++...++..|... +.+++.+|....+++++    -..|+-|++..+.....  ...|...|+.+
T Consensus       294 t~S~D~tvrlWDl~agkt~~tlt~hkks-vral~lhP~e~~fASas----~dnik~w~~p~g~f~~n--lsgh~~iintl  366 (460)
T KOG0285|consen  294 TGSHDSTVRLWDLRAGKTMITLTHHKKS-VRALCLHPKENLFASAS----PDNIKQWKLPEGEFLQN--LSGHNAIINTL  366 (460)
T ss_pred             EecCCceEEEeeeccCceeEeeecccce-eeEEecCCchhhhhccC----CccceeccCCccchhhc--cccccceeeee
Confidence            9999999999999999999999888776 99999999999999997    55799999987664333  23566678889


Q ss_pred             eecCCCCeEEEEecCCCeEEEEEecCCCCeeEEee-----eeeCCCceeeEEEeeCceeEEee--cceeEEEEecCC
Q psy17682        355 LYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYIN-----TFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNS  424 (490)
Q Consensus       355 ~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~  424 (490)
                      +...||-+  ++|+..|.+.+||.+++-.+.....     .+.....|...+|...|.-|+++  +..+++|+-+..
T Consensus       367 ~~nsD~v~--~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe~  441 (460)
T KOG0285|consen  367 SVNSDGVL--VSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDEH  441 (460)
T ss_pred             eeccCceE--EEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEecccc
Confidence            88888743  5899999999999999865543311     12234568889999999888877  558888886654

>KOG0284|consensus

Probab=100.00  E-value=6.4e-38  Score=274.12  Aligned_cols=285  Identities=21%  Similarity=0.304  Sum_probs=242.9

Q ss_pred             ccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccc
Q psy17682         43 HQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDY  122 (490)
Q Consensus        43 H~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  122 (490)
                      -.-.|+.|.|.|+| +.|++|+..|.+.+|+...-.+..                       ....+...|+.+.|+++.
T Consensus        95 vkc~V~~v~WtPeG-RRLltgs~SGEFtLWNg~~fnFEt-----------------------ilQaHDs~Vr~m~ws~~g  150 (464)
T KOG0284|consen   95 VKCPVNVVRWTPEG-RRLLTGSQSGEFTLWNGTSFNFET-----------------------ILQAHDSPVRTMKWSHNG  150 (464)
T ss_pred             cccceeeEEEcCCC-ceeEeecccccEEEecCceeeHHH-----------------------HhhhhcccceeEEEccCC
Confidence            44589999999999 899999999999999885432111                       012256689999999985


Q ss_pred             ccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeec-ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcc
Q psy17682        123 VKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGG-HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGIS  201 (490)
Q Consensus       123 ~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~  201 (490)
                           ..+.++..+|.|++|+..        + ..+..+++ |...|.+++|+|.+ ..++++++||+|+|||....+..
T Consensus       151 -----~wmiSgD~gG~iKyWqpn--------m-nnVk~~~ahh~eaIRdlafSpnD-skF~t~SdDg~ikiWdf~~~kee  215 (464)
T KOG0284|consen  151 -----TWMISGDKGGMIKYWQPN--------M-NNVKIIQAHHAEAIRDLAFSPND-SKFLTCSDDGTIKIWDFRMPKEE  215 (464)
T ss_pred             -----CEEEEcCCCceEEecccc--------h-hhhHHhhHhhhhhhheeccCCCC-ceeEEecCCCeEEEEeccCCchh
Confidence                 578889999999999986        1 22334444 45999999999966 89999999999999998776654


Q ss_pred             cccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCe
Q psy17682        202 RTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKK  281 (490)
Q Consensus       202 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  281 (490)
                      +.       +.+|.-.|.++.|+|... ++++||.|..|++||.++++++.++.+|+..|..+.|+|++++|+++|.|..
T Consensus       216 ~v-------L~GHgwdVksvdWHP~kg-LiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~  287 (464)
T KOG0284|consen  216 RV-------LRGHGWDVKSVDWHPTKG-LIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQS  287 (464)
T ss_pred             he-------eccCCCCcceeccCCccc-eeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCce
Confidence            43       567999999999999986 9999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeCCCCceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCC
Q psy17682        282 MRIINPRTGAIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDT  360 (490)
Q Consensus       282 i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~  360 (490)
                      ++++|+++.+.+.++++|... +.++.|+|- ..+|++|+   .|+.|..|.+.. +.+.......|...|++++|+|-|
T Consensus       288 ~kv~DiR~mkEl~~~r~Hkkd-v~~~~WhP~~~~lftsgg---~Dgsvvh~~v~~-~~p~~~i~~AHd~~iwsl~~hPlG  362 (464)
T KOG0284|consen  288 CKVFDIRTMKELFTYRGHKKD-VTSLTWHPLNESLFTSGG---SDGSVVHWVVGL-EEPLGEIPPAHDGEIWSLAYHPLG  362 (464)
T ss_pred             EEEEehhHhHHHHHhhcchhh-heeeccccccccceeecc---CCCceEEEeccc-cccccCCCcccccceeeeeccccc
Confidence            999999998999999999886 999999997 55777776   799999999884 445555566788899999999999


Q ss_pred             CeEEEEecCCCeEEEEEecC
Q psy17682        361 NLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       361 ~~l~~~g~~dg~i~iwd~~~  380 (490)
                      ..| ++|+.|.++++|.-..
T Consensus       363 hil-~tgsnd~t~rfw~r~r  381 (464)
T KOG0284|consen  363 HIL-ATGSNDRTVRFWTRNR  381 (464)
T ss_pred             eeE-eecCCCcceeeeccCC
Confidence            888 8999999999997653

>KOG1445|consensus

Probab=100.00  E-value=3.1e-37  Score=283.66  Aligned_cols=345  Identities=28%  Similarity=0.546  Sum_probs=296.1

Q ss_pred             EEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccccccee
Q psy17682        130 IRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV  209 (490)
Q Consensus       130 ~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  209 (490)
                      +--++..|.|.||++.    +.|++.....----....|+.+.|.|-+...|+++++||.|++|.+..+........|..
T Consensus       596 VPL~g~gG~iai~el~----~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~  671 (1012)
T KOG1445|consen  596 VPLAGSGGVIAIYELN----EPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEK  671 (1012)
T ss_pred             EEecCCCceEEEEEcC----CCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcce
Confidence            3345668999999998    778776543332235678999999998889999999999999999999888888888889


Q ss_pred             eecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy17682        210 DLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRT  289 (490)
Q Consensus       210 ~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~  289 (490)
                      .+.+|...|+++.|+|-..++|++++.|.+|++||+.+++....+.+|.+.|..++|+|+|+.+++.+.||+|++|..++
T Consensus       672 ~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs  751 (1012)
T KOG1445|consen  672 ILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRS  751 (1012)
T ss_pred             eeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCC
Confidence            99999999999999998777999999999999999999999999999999999999999999999999999999999997


Q ss_pred             Cc-eeeeeeecCCCceeEEEEeCCCcEEE-EEeCCCceeEEEEecCCCCC-CCeEEEeccCCCceeeeeecCCCCeEEEE
Q psy17682        290 GA-IEEEAVCHEGSKATRAIYLKSGLIFT-TGFSKMSERQYSLRAPDHLD-EPIVMVELDTSNGVMFPLYDPDTNLVYLC  366 (490)
Q Consensus       290 ~~-~~~~~~~~~~~~~~~~~~s~~~~~l~-~~~~~~~~~~i~iwd~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  366 (490)
                      ++ +++.-.+..+..-..+.|.-+|++++ +|.+..+.+.|.+||..+.. .++....++....+.-..+.+|...||++
T Consensus       752 ~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lflt  831 (1012)
T KOG1445|consen  752 REQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLT  831 (1012)
T ss_pred             CCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEe
Confidence            64 45544455555567788999988664 56666678899999988765 45555555655566677889999999999


Q ss_pred             ecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecCCCceEEEEEEEeC-CCcCcccCC
Q psy17682        367 GKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPR-KSELFQDDL  445 (490)
Q Consensus       367 g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~p~-~~~~~~~~~  445 (490)
                      |-.|..|.+|.+-...|++-.+..+.....-.+++|.++..+-+.+-+..+.|+|.+.. ++|+.|.+|| |.++||+|+
T Consensus       832 GKGD~~v~~yEv~~esPy~lpl~~f~sp~~hqGl~fl~K~~CdV~~VEf~~c~RL~~~~-lEpitFrvPRikke~FQDDl  910 (1012)
T KOG1445|consen  832 GKGDRFVNMYEVIYESPYLLPLAPFMSPVGHQGLAFLQKLKCDVMAVEFQVCWRLSDKN-LEPITFRVPRIKKEVFQDDL  910 (1012)
T ss_pred             cCCCceEEEEEecCCCceeeecccccCCCcccceeeecccccceeeeehhhhhhhccCc-ccceeeecchhhhhhhcccc
Confidence            99999999999999999988888888877889999999999999999988999999998 9999999999 999999999


Q ss_pred             CCCCC-CCCCccchhhhcCCCCCCCc--ccCCCCcCC
Q psy17682        446 YPDTV-GDTAALTADEWFAGNELFQD--DLYPDTVGD  479 (490)
Q Consensus       446 ~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  479 (490)
                      ||++. ..++.++.+.|+.|.++++.  +++|..+..
T Consensus       911 FPdt~vtWepvls~e~W~~g~~~ap~~~SLkPp~ms~  947 (1012)
T KOG1445|consen  911 FPDTLVTWEPVLSGEKWMLGEQAAPVFRSLKPPSMSS  947 (1012)
T ss_pred             CCCceeeeecccchhhhhhcccCCCceeecCCCCCcc
Confidence            99975 66999999999999988876  777766443

>KOG0318|consensus

Probab=100.00  E-value=3.5e-35  Score=264.92  Aligned_cols=355  Identities=14%  Similarity=0.209  Sum_probs=269.1

Q ss_pred             eeeeeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecc
Q psy17682         22 LFRLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKV  101 (490)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (490)
                      +-+...|+.-+   .+-.+.||...|+++.|-|.-+.+++|||+|++|.++.=-.-++..          +         
T Consensus       128 fg~~F~~DSG~---SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~----------s---------  185 (603)
T KOG0318|consen  128 FGHVFLWDSGN---SVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKS----------S---------  185 (603)
T ss_pred             eeEEEEecCCC---ccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeee----------c---------
Confidence            34555566433   3456899999999999999999999999999999998532211110          0         


Q ss_pred             cCCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEE
Q psy17682        102 GGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVI  181 (490)
Q Consensus       102 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l  181 (490)
                          ...+...|+++.++||+     ..+++.+.||.+.+|+=     .+++....+.--.+|++.|.+++|+||+ ..+
T Consensus       186 ----~r~HskFV~~VRysPDG-----~~Fat~gsDgki~iyDG-----ktge~vg~l~~~~aHkGsIfalsWsPDs-~~~  250 (603)
T KOG0318|consen  186 ----FREHSKFVNCVRYSPDG-----SRFATAGSDGKIYIYDG-----KTGEKVGELEDSDAHKGSIFALSWSPDS-TQF  250 (603)
T ss_pred             ----ccccccceeeEEECCCC-----CeEEEecCCccEEEEcC-----CCccEEEEecCCCCccccEEEEEECCCC-ceE
Confidence                01134479999999996     46677999999999986     3443222222234899999999999998 899


Q ss_pred             EEEeCCCcEEEEECCCCCcccccc------------------------------------cceeeecccccCEEEEEEee
Q psy17682        182 ASGSEDCVVKVWQIPDGGISRTLT------------------------------------EPVVDLLYHQRRVGLVLWHP  225 (490)
Q Consensus       182 ~s~~~dg~i~iwd~~~~~~~~~~~------------------------------------~~~~~~~~~~~~v~~~~~~p  225 (490)
                      +|++.|.+++|||+.++++++++.                                    .+...+.+|...|+++..+|
T Consensus       251 ~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~  330 (603)
T KOG0318|consen  251 LTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSP  330 (603)
T ss_pred             EEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcC
Confidence            999999999999999887766553                                    34556789999999999999


Q ss_pred             CCCCEEEEEeCCCcEEEEECCCCee-----------EEEEecC-------------------------------------
Q psy17682        226 TAQNVLLTAGSDNNVAIWNVGTGEI-----------MIQIECH-------------------------------------  257 (490)
Q Consensus       226 ~~~~~l~s~~~dg~v~iwd~~~~~~-----------~~~~~~~-------------------------------------  257 (490)
                      +++ .|++|+.||.|.-|+..++..           +..+..+                                     
T Consensus       331 d~~-~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~  409 (603)
T KOG0318|consen  331 DGK-TIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPK  409 (603)
T ss_pred             CCC-EEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCce
Confidence            995 999999999999999754321           0000000                                     


Q ss_pred             ---------------------------------CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee--eeeecCCC
Q psy17682        258 ---------------------------------PDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEE--EAVCHEGS  302 (490)
Q Consensus       258 ---------------------------------~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~  302 (490)
                                                       .-...+++++|+++.++.|+.|+.|++|.+.......  ....|.+.
T Consensus       410 ~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~  489 (603)
T KOG0318|consen  410 GLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAA  489 (603)
T ss_pred             eEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCC
Confidence                                             0013578899999999999999999999998765433  33456664


Q ss_pred             ceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        303 KATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       303 ~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                       ++.+++|||+.+|++|.   ..+.+.+||..+.+...... .-|...|.+++|+|+..++ |+|+.|..|.||++....
T Consensus       490 -iT~vaySpd~~yla~~D---a~rkvv~yd~~s~~~~~~~w-~FHtakI~~~aWsP~n~~v-ATGSlDt~Viiysv~kP~  563 (603)
T KOG0318|consen  490 -ITDVAYSPDGAYLAAGD---ASRKVVLYDVASREVKTNRW-AFHTAKINCVAWSPNNKLV-ATGSLDTNVIIYSVKKPA  563 (603)
T ss_pred             -ceEEEECCCCcEEEEec---cCCcEEEEEcccCceeccee-eeeeeeEEEEEeCCCceEE-EeccccceEEEEEccChh
Confidence             99999999999999997   68899999999866422222 2366889999999999988 999999999999999876


Q ss_pred             CeeEEeeeeeCCCceeeEEEeeCceeEEee-cceeEEEEec
Q psy17682        383 PFVHYINTFQTPDPQRGIGMMPKRGCDVNS-CEIGRFFRLN  422 (490)
Q Consensus       383 ~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~~~~~~  422 (490)
                      ..+....  .|...|+.+.|-.+..++-++ +..+++|.+.
T Consensus       564 ~~i~ikn--AH~~gVn~v~wlde~tvvSsG~Da~iK~W~v~  602 (603)
T KOG0318|consen  564 KHIIIKN--AHLGGVNSVAWLDESTVVSSGQDANIKVWNVT  602 (603)
T ss_pred             hheEecc--ccccCceeEEEecCceEEeccCcceeEEeccc
Confidence            4433332  344569999999887765555 4488999864

>KOG0315|consensus

Probab=100.00  E-value=2.5e-35  Score=241.91  Aligned_cols=276  Identities=11%  Similarity=0.142  Sum_probs=233.2

Q ss_pred             EEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccccc
Q psy17682        127 KEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTE  206 (490)
Q Consensus       127 ~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  206 (490)
                      ..++++++.|-+|+.|...     +|   .+.++++...+.|+.+...|++ ..||+++. ..||+||+++++.     .
T Consensus        10 ~viLvsA~YDhTIRfWqa~-----tG---~C~rTiqh~dsqVNrLeiTpdk-~~LAaa~~-qhvRlyD~~S~np-----~   74 (311)
T KOG0315|consen   10 PVILVSAGYDHTIRFWQAL-----TG---ICSRTIQHPDSQVNRLEITPDK-KDLAAAGN-QHVRLYDLNSNNP-----N   74 (311)
T ss_pred             ceEEEeccCcceeeeeehh-----cC---eEEEEEecCccceeeEEEcCCc-chhhhccC-CeeEEEEccCCCC-----C
Confidence            4578899999999999984     34   4777888888999999999988 78888775 5899999998865     4


Q ss_pred             ceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy17682        207 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIIN  286 (490)
Q Consensus       207 ~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd  286 (490)
                      |..++.+|...|+.+.|..+|+ .+++|++||+++|||++...+.+.++ |..+|+++..+|+...|++|..+|.|++||
T Consensus        75 Pv~t~e~h~kNVtaVgF~~dgr-WMyTgseDgt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWD  152 (311)
T KOG0315|consen   75 PVATFEGHTKNVTAVGFQCDGR-WMYTGSEDGTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWD  152 (311)
T ss_pred             ceeEEeccCCceEEEEEeecCe-EEEecCCCceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEeecCCCcEEEEE
Confidence            7778999999999999999996 99999999999999999977767676 789999999999999999999999999999


Q ss_pred             CCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE----EeccCCCceeeeeecCCCCe
Q psy17682        287 PRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM----VELDTSNGVMFPLYDPDTNL  362 (490)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~----~~~~~~~~i~~~~~s~~~~~  362 (490)
                      ++...+...+.......+.++...|||.+++++.   ..|..++|++-+......+    +...|...+..+.+|||+++
T Consensus       153 l~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~n---nkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~  229 (311)
T KOG0315|consen  153 LGENSCTHELIPEDDTSIQSLTVMPDGSMLAAAN---NKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKY  229 (311)
T ss_pred             ccCCccccccCCCCCcceeeEEEcCCCcEEEEec---CCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcE
Confidence            9998877777766666799999999999999998   6889999998764432222    12246677999999999999


Q ss_pred             EEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--eeEEEEecCCC
Q psy17682        363 VYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--IGRFFRLNNSG  425 (490)
Q Consensus       363 l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~~~~~~  425 (490)
                      | ++++.|.+++||+..+.  +...+....+...+.+.+||.|+.++++++.  ..|+|++..++
T Consensus       230 l-at~ssdktv~iwn~~~~--~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k  291 (311)
T KOG0315|consen  230 L-ATCSSDKTVKIWNTDDF--FKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGK  291 (311)
T ss_pred             E-EeecCCceEEEEecCCc--eeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCc
Confidence            9 88999999999999886  2223333345578999999999999998854  78999999887

>KOG0319|consensus

Probab=100.00  E-value=8.3e-35  Score=272.54  Aligned_cols=359  Identities=15%  Similarity=0.205  Sum_probs=280.3

Q ss_pred             hhheeeeeeeccCCCCCcEEeccc-ccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccce
Q psy17682         19 FAVLFRLTYFSPRTLTEPVVDLLY-HQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNV   97 (490)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~l~g-H~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~   97 (490)
                      .+++.++.-++..   +.+..+.. |.++|-.++|+|.+ .+|++||.|+.+++||+..+..                  
T Consensus        82 rs~llrv~~L~tg---k~irswKa~He~Pvi~ma~~~~g-~LlAtggaD~~v~VWdi~~~~~------------------  139 (775)
T KOG0319|consen   82 RSQLLRVWSLPTG---KLIRSWKAIHEAPVITMAFDPTG-TLLATGGADGRVKVWDIKNGYC------------------  139 (775)
T ss_pred             ccceEEEEEcccc---hHhHhHhhccCCCeEEEEEcCCC-ceEEeccccceEEEEEeeCCEE------------------
Confidence            3444444434322   66666777 99999999999999 9999999999999999998652                  


Q ss_pred             eecccCCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCC
Q psy17682         98 LDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHD  177 (490)
Q Consensus        98 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~  177 (490)
                      ...+.+.++     .|.++.|.|+...   ..++++..|+.+++|++.     ..+.  +..++..|...|++++|.+++
T Consensus       140 th~fkG~gG-----vVssl~F~~~~~~---~lL~sg~~D~~v~vwnl~-----~~~t--cl~~~~~H~S~vtsL~~~~d~  204 (775)
T KOG0319|consen  140 THSFKGHGG-----VVSSLLFHPHWNR---WLLASGATDGTVRVWNLN-----DKRT--CLHTMILHKSAVTSLAFSEDS  204 (775)
T ss_pred             EEEecCCCc-----eEEEEEeCCccch---hheeecCCCceEEEEEcc-----cCch--HHHHHHhhhhheeeeeeccCC
Confidence            222222222     5788889888533   567889999999999995     2221  577888999999999999997


Q ss_pred             CCEEEEEeCCCcEEEEECCCCCcccccc----------------------------------------------------
Q psy17682        178 DNVIASGSEDCVVKVWQIPDGGISRTLT----------------------------------------------------  205 (490)
Q Consensus       178 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~----------------------------------------------------  205 (490)
                       .-+++++.|..|.+||+.+.+..+.++                                                    
T Consensus       205 -~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e  283 (775)
T KOG0319|consen  205 -LELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEE  283 (775)
T ss_pred             -ceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchh
Confidence             788888999999999885433322211                                                    


Q ss_pred             ------------------------------------------------------------------------cceeeecc
Q psy17682        206 ------------------------------------------------------------------------EPVVDLLY  213 (490)
Q Consensus       206 ------------------------------------------------------------------------~~~~~~~~  213 (490)
                                                                                              .....+.+
T Consensus       284 ~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~G  363 (775)
T KOG0319|consen  284 IDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPG  363 (775)
T ss_pred             hhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeC
Confidence                                                                                    11234678


Q ss_pred             cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe----eEEEEecCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCC
Q psy17682        214 HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE----IMIQIECHPDIVYSASWNWDG-SKLLTTCKDKKMRIINPR  288 (490)
Q Consensus       214 ~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~  288 (490)
                      |...|.++....+| .+|++|+.|.++++|.++++.    ++....+|.+.|.+++++..+ .+|+++|.|+++++|++.
T Consensus       364 H~e~vlSL~~~~~g-~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~  442 (775)
T KOG0319|consen  364 HTEAVLSLDVWSSG-DLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLP  442 (775)
T ss_pred             chhheeeeeecccC-cEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCC
Confidence            99999999855566 499999999999999885443    445566899999999998755 699999999999999998


Q ss_pred             CCcee---------eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCC
Q psy17682        289 TGAIE---------EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPD  359 (490)
Q Consensus       289 ~~~~~---------~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~  359 (490)
                      ..+..         .+...|... |.+++++|+.+++++|+   .|++.+||++....  ..-...+|..+++++.|+|.
T Consensus       443 ~s~~~~~~~~~~~~~t~~aHdKd-IN~Vaia~ndkLiAT~S---qDktaKiW~le~~~--l~~vLsGH~RGvw~V~Fs~~  516 (775)
T KOG0319|consen  443 KSKETAFPIVLTCRYTERAHDKD-INCVAIAPNDKLIATGS---QDKTAKIWDLEQLR--LLGVLSGHTRGVWCVSFSKN  516 (775)
T ss_pred             CcccccccceehhhHHHHhhccc-ccceEecCCCceEEecc---cccceeeecccCce--EEEEeeCCccceEEEEeccc
Confidence            73211         122356665 99999999999999999   79999999999433  33344578899999999999


Q ss_pred             CCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCceeEEee--cceeEEEEecCCCce
Q psy17682        360 TNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSGLC  427 (490)
Q Consensus       360 ~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~~~  427 (490)
                      .+.+ +++|.|++|+||.+.+..    .+.++. |...|..+.|-.++..++++  ++.+++|++.++...
T Consensus       517 dq~l-aT~SgD~TvKIW~is~fS----ClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~  582 (775)
T KOG0319|consen  517 DQLL-ATCSGDKTVKIWSISTFS----CLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECE  582 (775)
T ss_pred             ccee-EeccCCceEEEEEeccce----eeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhh
Confidence            9988 899999999999999987    566666 55789999999999998887  458899999887733

>KOG0282|consensus

Probab=100.00  E-value=1.1e-36  Score=272.09  Aligned_cols=292  Identities=17%  Similarity=0.290  Sum_probs=239.2

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      +.+..+.||+..|+++.|.|....+|+|||.|+.|+||++-+..                                    
T Consensus       205 k~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~------------------------------------  248 (503)
T KOG0282|consen  205 KLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDR------------------------------------  248 (503)
T ss_pred             hheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCc------------------------------------
Confidence            34567999999999999999544999999999999999876521                                    


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                                                               .+++++.||..+|..++|+++| ..++|++-|+.|++||
T Consensus       249 -----------------------------------------~~lrtf~gH~k~Vrd~~~s~~g-~~fLS~sfD~~lKlwD  286 (503)
T KOG0282|consen  249 -----------------------------------------RCLRTFKGHRKPVRDASFNNCG-TSFLSASFDRFLKLWD  286 (503)
T ss_pred             -----------------------------------------ceehhhhcchhhhhhhhccccC-Ceeeeeecceeeeeec
Confidence                                                     1445788999999999999998 8999999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEE
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLL  274 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  274 (490)
                      +++|+++..+.        ....++|+.|+|++.+.+++|+.|+.|+.||+++++.++++..|-+.|..+.|-++|+.++
T Consensus       287 tETG~~~~~f~--------~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFi  358 (503)
T KOG0282|consen  287 TETGQVLSRFH--------LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFI  358 (503)
T ss_pred             cccceEEEEEe--------cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEe
Confidence            99999887764        4567899999999988999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeE---EEeccCCCce
Q psy17682        275 TTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIV---MVELDTSNGV  351 (490)
Q Consensus       275 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~---~~~~~~~~~i  351 (490)
                      +.+.|++++||+.+.+-+++....+......++..+|++.++++-+   .+..|.++.+...-....   +......+--
T Consensus       359 ssSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs---~dN~i~ifs~~~~~r~nkkK~feGh~vaGys  435 (503)
T KOG0282|consen  359 SSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQS---MDNYIAIFSTVPPFRLNKKKRFEGHSVAGYS  435 (503)
T ss_pred             eeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhc---cCceEEEEecccccccCHhhhhcceeccCce
Confidence            9999999999999988776655533333367889999999999887   788899988664322111   1111122336


Q ss_pred             eeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCceeEEee---cceeEEEE
Q psy17682        352 MFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGCDVNS---CEIGRFFR  420 (490)
Q Consensus       352 ~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~---~~~~~~~~  420 (490)
                      ..+.|||||++| ++|+.||.+.+||.++.+    .+..+. +..++.++.|+|...-.+++   ++.+++|+
T Consensus       436 ~~v~fSpDG~~l-~SGdsdG~v~~wdwkt~k----l~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  436 CQVDFSPDGRTL-CSGDSDGKVNFWDWKTTK----LVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             eeEEEcCCCCeE-EeecCCccEEEeechhhh----hhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence            788999999999 899999999999999987    333334 34799999999986543433   44666663

>KOG0284|consensus

Probab=100.00  E-value=3e-36  Score=263.73  Aligned_cols=286  Identities=15%  Similarity=0.226  Sum_probs=241.4

Q ss_pred             CcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeC
Q psy17682        107 ANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSE  186 (490)
Q Consensus       107 ~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~  186 (490)
                      ......|+.+.|.|++     .-+.+++..|.+.+|+..        .......++.|..+|.++.|++++ .+++||+.
T Consensus        93 NKvkc~V~~v~WtPeG-----RRLltgs~SGEFtLWNg~--------~fnFEtilQaHDs~Vr~m~ws~~g-~wmiSgD~  158 (464)
T KOG0284|consen   93 NKVKCPVNVVRWTPEG-----RRLLTGSQSGEFTLWNGT--------SFNFETILQAHDSPVRTMKWSHNG-TWMISGDK  158 (464)
T ss_pred             cccccceeeEEEcCCC-----ceeEeecccccEEEecCc--------eeeHHHHhhhhcccceeEEEccCC-CEEEEcCC
Confidence            3345578999999996     357778999999999874        222334568999999999999988 89999999


Q ss_pred             CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEE
Q psy17682        187 DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASW  266 (490)
Q Consensus       187 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~  266 (490)
                      +|.|++|+..-.. ++.+..      .|...|++++|+|+.. .|++++.||+|+|||....+....+.+|.-.|.+++|
T Consensus       159 gG~iKyWqpnmnn-Vk~~~a------hh~eaIRdlafSpnDs-kF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdW  230 (464)
T KOG0284|consen  159 GGMIKYWQPNMNN-VKIIQA------HHAEAIRDLAFSPNDS-KFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDW  230 (464)
T ss_pred             CceEEecccchhh-hHHhhH------hhhhhhheeccCCCCc-eeEEecCCCeEEEEeccCCchhheeccCCCCcceecc
Confidence            9999999965332 333221      2558999999999874 8999999999999999988888888999999999999


Q ss_pred             cCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc
Q psy17682        267 NWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD  346 (490)
Q Consensus       267 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~  346 (490)
                      +|...+|++++.|..|++||.++++++.++..|... |..+.|++++.+|++++   .|..++++|+++.+....+.  .
T Consensus       231 HP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKnt-Vl~~~f~~n~N~Llt~s---kD~~~kv~DiR~mkEl~~~r--~  304 (464)
T KOG0284|consen  231 HPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNT-VLAVKFNPNGNWLLTGS---KDQSCKVFDIRTMKELFTYR--G  304 (464)
T ss_pred             CCccceeEEccCCceeEeecCCCcchhhhhhhccce-EEEEEEcCCCCeeEEcc---CCceEEEEehhHhHHHHHhh--c
Confidence            999999999999999999999999999999999886 99999999999999999   79999999999766544333  5


Q ss_pred             CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--eeEEEEec
Q psy17682        347 TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--IGRFFRLN  422 (490)
Q Consensus       347 ~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~~~  422 (490)
                      |...+.++.|+|-..-|+++|+.||.|..|.+...+|+..  -...|...|++++|+|-|.++++++.  ++|+|.-.
T Consensus       305 Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~--i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~  380 (464)
T KOG0284|consen  305 HKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGE--IPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRN  380 (464)
T ss_pred             chhhheeeccccccccceeeccCCCceEEEeccccccccC--CCcccccceeeeeccccceeEeecCCCcceeeeccC
Confidence            7788999999999998889999999999999996664422  23456678999999999999998844  77888743

>KOG0291|consensus

Probab=100.00  E-value=1.2e-33  Score=265.17  Aligned_cols=360  Identities=15%  Similarity=0.134  Sum_probs=279.3

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCC--CCCC---CCcccccee-c----cccceeecccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGY--IPPS---EKSKSALKV-T----KRSNVLDKVGGK  104 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~--~~~~---~~~~~~~~~-~----~~~~~~~~~~~~  104 (490)
                      .....|.||.+.|-..-|..+. .-++|-++||.+.+|......  ....   .+....... .    +..+.......+
T Consensus       180 ~~~~~l~gHkd~VvacfF~~~~-~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k  258 (893)
T KOG0291|consen  180 LFTYALNGHKDYVVACFFGANS-LDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKK  258 (893)
T ss_pred             cceEeccCCCcceEEEEeccCc-ceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEe
Confidence            4456799999999999999988 779999999999999876321  0000   000000000 0    000111111111


Q ss_pred             CCCccc-ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEE
Q psy17682        105 GGANRN-STANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIAS  183 (490)
Q Consensus       105 ~~~~~~-~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s  183 (490)
                      ...+.+ ..+++.++++.     ..+++++-..|.+.+|.+.        -...++.+.--..+|..+.|+..| ..+|.
T Consensus       259 ~~ln~~~~kvtaa~fH~~-----t~~lvvgFssG~f~LyelP--------~f~lih~LSis~~~I~t~~~N~tG-DWiA~  324 (893)
T KOG0291|consen  259 HYLNQNSSKVTAAAFHKG-----TNLLVVGFSSGEFGLYELP--------DFNLIHSLSISDQKILTVSFNSTG-DWIAF  324 (893)
T ss_pred             eeecccccceeeeeccCC-----ceEEEEEecCCeeEEEecC--------CceEEEEeecccceeeEEEecccC-CEEEE
Confidence            122222 45777888777     4788889999999999885        122344454456789999999988 67777


Q ss_pred             EeC-CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEE
Q psy17682        184 GSE-DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVY  262 (490)
Q Consensus       184 ~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~  262 (490)
                      |+. =|.+-||+.++...+..       ..+|...+++++++|||+ ++++|+.||+|+|||..++-++.+|..|...|+
T Consensus       325 g~~klgQLlVweWqsEsYVlK-------QQgH~~~i~~l~YSpDgq-~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt  396 (893)
T KOG0291|consen  325 GCSKLGQLLVWEWQSESYVLK-------QQGHSDRITSLAYSPDGQ-LIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVT  396 (893)
T ss_pred             cCCccceEEEEEeeccceeee-------ccccccceeeEEECCCCc-EEEeccCCCcEEEEeccCceEEEEeccCCCceE
Confidence            655 48999999987765544       456999999999999996 999999999999999999999999999999999


Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE
Q psy17682        263 SASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM  342 (490)
Q Consensus       263 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~  342 (490)
                      .+.|+..|+.+++.+-||+|+.||+...+..+++..+......+++..|.|.++.+|+.  ..-.|.+|++.+++..-.+
T Consensus       397 ~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~--d~F~IfvWS~qTGqllDiL  474 (893)
T KOG0291|consen  397 AVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQ--DSFEIFVWSVQTGQLLDIL  474 (893)
T ss_pred             EEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeecc--ceEEEEEEEeecCeeeehh
Confidence            99999999999999999999999999999999999877767899999999999999984  3457999999998743322


Q ss_pred             EeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEE
Q psy17682        343 VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFR  420 (490)
Q Consensus       343 ~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~  420 (490)
                        .+|.++|.+++|+|+|..| ++|+.|.+|++||+-....   ..+.+.....+.+++|+|+|.-++++  ++.+.+|+
T Consensus       475 --sGHEgPVs~l~f~~~~~~L-aS~SWDkTVRiW~if~s~~---~vEtl~i~sdvl~vsfrPdG~elaVaTldgqItf~d  548 (893)
T KOG0291|consen  475 --SGHEGPVSGLSFSPDGSLL-ASGSWDKTVRIWDIFSSSG---TVETLEIRSDVLAVSFRPDGKELAVATLDGQITFFD  548 (893)
T ss_pred             --cCCCCcceeeEEccccCeE-EeccccceEEEEEeeccCc---eeeeEeeccceeEEEEcCCCCeEEEEEecceEEEEE
Confidence              3788899999999999988 8999999999999987653   34445566689999999999765544  77899999


Q ss_pred             ecCCC
Q psy17682        421 LNNSG  425 (490)
Q Consensus       421 ~~~~~  425 (490)
                      ...+.
T Consensus       549 ~~~~~  553 (893)
T KOG0291|consen  549 IKEAV  553 (893)
T ss_pred             hhhce
Confidence            87765

>KOG0316|consensus

Probab=100.00  E-value=7e-35  Score=237.34  Aligned_cols=287  Identities=18%  Similarity=0.200  Sum_probs=236.2

Q ss_pred             CCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682         33 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST  112 (490)
Q Consensus        33 ~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (490)
                      .++.+..|..|++.|..+.|+-+| ++.++||.|++|++|+...+.                                  
T Consensus         6 ptkr~~~l~~~qgaV~avryN~dG-nY~ltcGsdrtvrLWNp~rg~----------------------------------   50 (307)
T KOG0316|consen    6 PTKRLSILDCAQGAVRAVRYNVDG-NYCLTCGSDRTVRLWNPLRGA----------------------------------   50 (307)
T ss_pred             cchhceeecccccceEEEEEccCC-CEEEEcCCCceEEeecccccc----------------------------------
Confidence            345778899999999999999999 999999999999999887654                                  


Q ss_pred             CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEE
Q psy17682        113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKV  192 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~i  192 (490)
                                                                  .++++.+|...|..++.+.|+ ..+++|+.|..+.+
T Consensus        51 --------------------------------------------liktYsghG~EVlD~~~s~Dn-skf~s~GgDk~v~v   85 (307)
T KOG0316|consen   51 --------------------------------------------LIKTYSGHGHEVLDAALSSDN-SKFASCGGDKAVQV   85 (307)
T ss_pred             --------------------------------------------eeeeecCCCceeeeccccccc-cccccCCCCceEEE
Confidence                                                        233567899999999999988 89999999999999


Q ss_pred             EECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC--eeEEEEecCCCcEEEEEEcCCC
Q psy17682        193 WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG--EIMIQIECHPDIVYSASWNWDG  270 (490)
Q Consensus       193 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~  270 (490)
                      ||+.+|+..+.       +.+|...|+.++|+.+.. .+++|+.|.++++||.++.  ++++.+......|.++..+  +
T Consensus        86 wDV~TGkv~Rr-------~rgH~aqVNtV~fNeesS-Vv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~  155 (307)
T KOG0316|consen   86 WDVNTGKVDRR-------FRGHLAQVNTVRFNEESS-VVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--E  155 (307)
T ss_pred             EEcccCeeeee-------cccccceeeEEEecCcce-EEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--c
Confidence            99999998886       556999999999999885 9999999999999999864  6888888888999999986  6


Q ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCc
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNG  350 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~  350 (490)
                      ..|++|+.||+++.||+|.|+......+|   +++++.|+++++...+++   .++++++.|-.+++............-
T Consensus       156 heIvaGS~DGtvRtydiR~G~l~sDy~g~---pit~vs~s~d~nc~La~~---l~stlrLlDk~tGklL~sYkGhkn~ey  229 (307)
T KOG0316|consen  156 HEIVAGSVDGTVRTYDIRKGTLSSDYFGH---PITSVSFSKDGNCSLASS---LDSTLRLLDKETGKLLKSYKGHKNMEY  229 (307)
T ss_pred             cEEEeeccCCcEEEEEeecceeehhhcCC---cceeEEecCCCCEEEEee---ccceeeecccchhHHHHHhccccccee
Confidence            78999999999999999999887666554   499999999999888888   799999999998875544443333333


Q ss_pred             eeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC-Cc-eeeEEEeeCcee-EEeecceeEEEE
Q psy17682        351 VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP-DP-QRGIGMMPKRGC-DVNSCEIGRFFR  420 (490)
Q Consensus       351 i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~-i~~~~~sp~~~~-l~~~~~~~~~~~  420 (490)
                      -..++++.....+ ++|+.||.|++||+.+..    .+..+..+ .. +.+++++|.... +++++....+|.
T Consensus       230 kldc~l~qsdthV-~sgSEDG~Vy~wdLvd~~----~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~~~~~~~~  297 (307)
T KOG0316|consen  230 KLDCCLNQSDTHV-FSGSEDGKVYFWDLVDET----QISKLSVVSTVIVTDLSCHPTMDDFITATGHGDLFWY  297 (307)
T ss_pred             eeeeeecccceeE-EeccCCceEEEEEeccce----eeeeeccCCceeEEeeecccCccceeEecCCceecee
Confidence            4566777777777 899999999999999986    33333433 23 799999997644 444444444554

>KOG0295|consensus

Probab=100.00  E-value=2.2e-35  Score=254.78  Aligned_cols=292  Identities=17%  Similarity=0.243  Sum_probs=252.8

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      .+...+.||..+|+.+.|+|.- .+++++++|++|++||..++++.....                       ++...+.
T Consensus        99 ~l~~~l~g~r~~vt~v~~hp~~-~~v~~as~d~tikv~D~~tg~~e~~Lr-----------------------GHt~sv~  154 (406)
T KOG0295|consen   99 NLVQKLAGHRSSVTRVIFHPSE-ALVVSASEDATIKVFDTETGELERSLR-----------------------GHTDSVF  154 (406)
T ss_pred             CchhhhhccccceeeeeeccCc-eEEEEecCCceEEEEEccchhhhhhhh-----------------------cccccee
Confidence            4556799999999999999998 899999999999999999987533211                       1233477


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                      .++|+..+     ..+++.+.|-.+.+|+++    .   ...+++.+.+|+..|.++.|-|.| .++++++.|.+|+.|+
T Consensus       155 di~~~a~G-----k~l~tcSsDl~~~LWd~~----~---~~~c~ks~~gh~h~vS~V~f~P~g-d~ilS~srD~tik~We  221 (406)
T KOG0295|consen  155 DISFDASG-----KYLATCSSDLSAKLWDFD----T---FFRCIKSLIGHEHGVSSVFFLPLG-DHILSCSRDNTIKAWE  221 (406)
T ss_pred             EEEEecCc-----cEEEecCCccchhheeHH----H---HHHHHHHhcCcccceeeEEEEecC-CeeeecccccceeEEe
Confidence            77777664     467778888889999886    2   244677788999999999999998 8999999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCC-----
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWD-----  269 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-----  269 (490)
                      +.++.++..+       .+|...|..++.+.||. ++++++.|.+|++|-+.++++...+..|..+|.+++|.|.     
T Consensus       222 ~~tg~cv~t~-------~~h~ewvr~v~v~~DGt-i~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~  293 (406)
T KOG0295|consen  222 CDTGYCVKTF-------PGHSEWVRMVRVNQDGT-IIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPS  293 (406)
T ss_pred             cccceeEEec-------cCchHhEEEEEecCCee-EEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcc
Confidence            9999887764       45999999999999995 9999999999999999999988999999999999999763     


Q ss_pred             ----------CCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCC
Q psy17682        270 ----------GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEP  339 (490)
Q Consensus       270 ----------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~  339 (490)
                                ++++.+++.|++|++||+.++.++.++.+|.+. +..++|+|.|++|+++.   .|+++++||+++.++.
T Consensus       294 i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnw-Vr~~af~p~Gkyi~Sca---DDktlrvwdl~~~~cm  369 (406)
T KOG0295|consen  294 ISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNW-VRGVAFSPGGKYILSCA---DDKTLRVWDLKNLQCM  369 (406)
T ss_pred             hhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccce-eeeeEEcCCCeEEEEEe---cCCcEEEEEeccceee
Confidence                      258999999999999999999999999999987 99999999999999998   5899999999998865


Q ss_pred             eEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEe
Q psy17682        340 IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEI  378 (490)
Q Consensus       340 ~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~  378 (490)
                      ....  .|..-++++.|+.+..++ ++|+-|..+++|..
T Consensus       370 k~~~--ah~hfvt~lDfh~~~p~V-vTGsVdqt~KvwEc  405 (406)
T KOG0295|consen  370 KTLE--AHEHFVTSLDFHKTAPYV-VTGSVDQTVKVWEC  405 (406)
T ss_pred             eccC--CCcceeEEEecCCCCceE-Eeccccceeeeeec
Confidence            5443  556679999999999988 89999999999974

>KOG0263|consensus

Probab=100.00  E-value=2.6e-35  Score=278.66  Aligned_cols=214  Identities=22%  Similarity=0.316  Sum_probs=193.6

Q ss_pred             CCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682         33 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST  112 (490)
Q Consensus        33 ~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (490)
                      ......+|.||.++|..+.|+|+. ++|+|||.|+++|+|.+.+..                                  
T Consensus       440 ~~~~~~~L~GH~GPVyg~sFsPd~-rfLlScSED~svRLWsl~t~s----------------------------------  484 (707)
T KOG0263|consen  440 SSGTSRTLYGHSGPVYGCSFSPDR-RFLLSCSEDSSVRLWSLDTWS----------------------------------  484 (707)
T ss_pred             CCceeEEeecCCCceeeeeecccc-cceeeccCCcceeeeecccce----------------------------------
Confidence            344556699999999999999999 999999999999999998732                                  


Q ss_pred             CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEE
Q psy17682        113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKV  192 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~i  192 (490)
                                                                  ..-.++||..+|++++|+|.| .++|||+.|++.++
T Consensus       485 --------------------------------------------~~V~y~GH~~PVwdV~F~P~G-yYFatas~D~tArL  519 (707)
T KOG0263|consen  485 --------------------------------------------CLVIYKGHLAPVWDVQFAPRG-YYFATASHDQTARL  519 (707)
T ss_pred             --------------------------------------------eEEEecCCCcceeeEEecCCc-eEEEecCCCceeee
Confidence                                                        111346999999999999998 99999999999999


Q ss_pred             EECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCE
Q psy17682        193 WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSK  272 (490)
Q Consensus       193 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~  272 (490)
                      |.....+..+.       +.+|-+.|.|+.|+|+. +++++|+.|.+||+||..+|..++.|.+|.++|.+++|+|+|++
T Consensus       520 Ws~d~~~PlRi-------faghlsDV~cv~FHPNs-~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~  591 (707)
T KOG0263|consen  520 WSTDHNKPLRI-------FAGHLSDVDCVSFHPNS-NYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRY  591 (707)
T ss_pred             eecccCCchhh-------hcccccccceEEECCcc-cccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCce
Confidence            99887655554       56799999999999998 59999999999999999999999999999999999999999999


Q ss_pred             EEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC
Q psy17682        273 LLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE  338 (490)
Q Consensus       273 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~  338 (490)
                      |++|+.||.|.+||+.+++.+..+.+|.+. +.++.|+.+|.+|++|+   .|..|++||+.....
T Consensus       592 LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~t-i~SlsFS~dg~vLasgg---~DnsV~lWD~~~~~~  653 (707)
T KOG0263|consen  592 LASGDEDGLIKIWDLANGSLVKQLKGHTGT-IYSLSFSRDGNVLASGG---ADNSVRLWDLTKVIE  653 (707)
T ss_pred             EeecccCCcEEEEEcCCCcchhhhhcccCc-eeEEEEecCCCEEEecC---CCCeEEEEEchhhcc
Confidence            999999999999999999999999999665 99999999999999998   799999999886443

>KOG0291|consensus

Probab=100.00  E-value=1.9e-33  Score=263.86  Aligned_cols=337  Identities=18%  Similarity=0.219  Sum_probs=268.4

Q ss_pred             ccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccc
Q psy17682         43 HQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDY  122 (490)
Q Consensus        43 H~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  122 (490)
                      ....|++..||+.. .+|++|=..|...++.+-+-.                  .+..+..     ....+..++|+..+
T Consensus       264 ~~~kvtaa~fH~~t-~~lvvgFssG~f~LyelP~f~------------------lih~LSi-----s~~~I~t~~~N~tG  319 (893)
T KOG0291|consen  264 NSSKVTAAAFHKGT-NLLVVGFSSGEFGLYELPDFN------------------LIHSLSI-----SDQKILTVSFNSTG  319 (893)
T ss_pred             cccceeeeeccCCc-eEEEEEecCCeeEEEecCCce------------------EEEEeec-----ccceeeEEEecccC
Confidence            34789999999988 899999999999999887633                  1111111     12246667776443


Q ss_pred             ccceEEEEEe-eCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcc
Q psy17682        123 VKEFKEEIRK-LKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGIS  201 (490)
Q Consensus       123 ~~~~~~~~~~-~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~  201 (490)
                           ..++. ++.-|.+.||+..        ....+...+||...+++++++||| .++|+|++||+|+|||...+-|.
T Consensus       320 -----DWiA~g~~klgQLlVweWq--------sEsYVlKQQgH~~~i~~l~YSpDg-q~iaTG~eDgKVKvWn~~SgfC~  385 (893)
T KOG0291|consen  320 -----DWIAFGCSKLGQLLVWEWQ--------SESYVLKQQGHSDRITSLAYSPDG-QLIATGAEDGKVKVWNTQSGFCF  385 (893)
T ss_pred             -----CEEEEcCCccceEEEEEee--------ccceeeeccccccceeeEEECCCC-cEEEeccCCCcEEEEeccCceEE
Confidence                 23333 3445899999885        222344557999999999999999 89999999999999999999888


Q ss_pred             cccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec-CCCcEEEEEEcCCCCEEEEEeCCC
Q psy17682        202 RTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-HPDIVYSASWNWDGSKLLTTCKDK  280 (490)
Q Consensus       202 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg  280 (490)
                      .++..       |...|+.+.|+..+ +.+++++.||+|+.||+......+++.. ...+..|++..|.|..+.+|+.|.
T Consensus       386 vTFte-------Hts~Vt~v~f~~~g-~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~  457 (893)
T KOG0291|consen  386 VTFTE-------HTSGVTAVQFTARG-NVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDS  457 (893)
T ss_pred             EEecc-------CCCceEEEEEEecC-CEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccce
Confidence            87665       99999999999999 5999999999999999999988888873 345577899999999999999886


Q ss_pred             e-EEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCC
Q psy17682        281 K-MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPD  359 (490)
Q Consensus       281 ~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~  359 (490)
                      . |++|++.+|+.+..+.+|.++ +.++.|+|.|..|++|+   .|.+|++||+-....  ....+.....+..++|+|+
T Consensus       458 F~IfvWS~qTGqllDiLsGHEgP-Vs~l~f~~~~~~LaS~S---WDkTVRiW~if~s~~--~vEtl~i~sdvl~vsfrPd  531 (893)
T KOG0291|consen  458 FEIFVWSVQTGQLLDILSGHEGP-VSGLSFSPDGSLLASGS---WDKTVRIWDIFSSSG--TVETLEIRSDVLAVSFRPD  531 (893)
T ss_pred             EEEEEEEeecCeeeehhcCCCCc-ceeeEEccccCeEEecc---ccceEEEEEeeccCc--eeeeEeeccceeEEEEcCC
Confidence            4 999999999999999999986 99999999999999999   899999999875433  3444556678999999999


Q ss_pred             CCeEEEEecCCCeEEEEEecCCCCeeE------------Eeeee-----eCCCceeeEEEeeCceeEEeecc--eeEEEE
Q psy17682        360 TNLVYLCGKGDSVIRYFEITAEPPFVH------------YINTF-----QTPDPQRGIGMMPKRGCDVNSCE--IGRFFR  420 (490)
Q Consensus       360 ~~~l~~~g~~dg~i~iwd~~~~~~~~~------------~~~~~-----~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~  420 (490)
                      |+.| ++++.||.|.+||...+.....            ....+     ......+.+++|+||.+++++++  .+.+|+
T Consensus       532 G~el-aVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~  610 (893)
T KOG0291|consen  532 GKEL-AVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYD  610 (893)
T ss_pred             CCeE-EEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEE
Confidence            9999 7788999999999986542210            00001     12357899999999999998865  778899


Q ss_pred             ecCCCceEEEEE
Q psy17682        421 LNNSGLCQVVSM  432 (490)
Q Consensus       421 ~~~~~~~~~i~~  432 (490)
                      +.++-+++...+
T Consensus       611 v~~~vllkkfqi  622 (893)
T KOG0291|consen  611 VPEGVLLKKFQI  622 (893)
T ss_pred             CchhheeeeEEe
Confidence            888876665544

>KOG0266|consensus

Probab=100.00  E-value=5.8e-34  Score=276.81  Aligned_cols=293  Identities=20%  Similarity=0.288  Sum_probs=240.6

Q ss_pred             EEecccc-cceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         37 VVDLLYH-QRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        37 ~~~l~gH-~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      ...+.+| ...|.++.|+|+| ..+++++.|+.+++|+......                                    
T Consensus       151 ~~~~~~~~~~sv~~~~fs~~g-~~l~~~~~~~~i~~~~~~~~~~------------------------------------  193 (456)
T KOG0266|consen  151 EQTLAGHECPSVTCVDFSPDG-RALAAASSDGLIRIWKLEGIKS------------------------------------  193 (456)
T ss_pred             eeeecccccCceEEEEEcCCC-CeEEEccCCCcEEEeecccccc------------------------------------
Confidence            4455565 7899999999999 7799999999999998844220                                    


Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI  195 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~  195 (490)
                                                              ...+.+.+|...|.+++|+|++ .++++++.|++|+|||+
T Consensus       194 ----------------------------------------~~~~~l~~h~~~v~~~~fs~d~-~~l~s~s~D~tiriwd~  232 (456)
T KOG0266|consen  194 ----------------------------------------NLLRELSGHTRGVSDVAFSPDG-SYLLSGSDDKTLRIWDL  232 (456)
T ss_pred             ----------------------------------------hhhccccccccceeeeEECCCC-cEEEEecCCceEEEeec
Confidence                                                    0112336899999999999998 79999999999999999


Q ss_pred             C-CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEE
Q psy17682        196 P-DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLL  274 (490)
Q Consensus       196 ~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  274 (490)
                      . .+..++.       +.+|...|++++|+|++ +++++|+.|++|+|||+++++++..+.+|.+.|++++|++++++|+
T Consensus       233 ~~~~~~~~~-------l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~  304 (456)
T KOG0266|consen  233 KDDGRNLKT-------LKGHSTYVTSVAFSPDG-NLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLV  304 (456)
T ss_pred             cCCCeEEEE-------ecCCCCceEEEEecCCC-CEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEE
Confidence            3 3345444       56799999999999999 6999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCeEEEEeCCCCc--eeeeeeecCCC-ceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC-Cc
Q psy17682        275 TTCKDKKMRIINPRTGA--IEEEAVCHEGS-KATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS-NG  350 (490)
Q Consensus       275 ~~~~dg~i~iwd~~~~~--~~~~~~~~~~~-~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~-~~  350 (490)
                      +++.|+.|++||+.++.  +...+..+... .++.+.|+|++.++++++   .++.+++||+.....+......... ..
T Consensus       305 s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~---~d~~~~~w~l~~~~~~~~~~~~~~~~~~  381 (456)
T KOG0266|consen  305 SASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSAS---LDRTLKLWDLRSGKSVGTYTGHSNLVRC  381 (456)
T ss_pred             EcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEec---CCCeEEEEEccCCcceeeecccCCccee
Confidence            99999999999999999  56777766665 689999999999999998   6889999999987765555432221 24


Q ss_pred             eeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec----ceeEEEEe
Q psy17682        351 VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC----EIGRFFRL  421 (490)
Q Consensus       351 i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~----~~~~~~~~  421 (490)
                      +.+...++.++++ ++|+.|+.|++|++.++.. ...+..+. ...+..++++|...++++.+    ..+++|..
T Consensus       382 ~~~~~~~~~~~~i-~sg~~d~~v~~~~~~s~~~-~~~l~~h~-~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~  453 (456)
T KOG0266|consen  382 IFSPTLSTGGKLI-YSGSEDGSVYVWDSSSGGI-LQRLEGHS-KAAVSDLSSHPTENLIASSSFEGDGLIRLWKY  453 (456)
T ss_pred             EecccccCCCCeE-EEEeCCceEEEEeCCccch-hhhhcCCC-CCceeccccCCCcCeeeecCcCCCceEEEecC
Confidence            5556668889998 7999999999999998662 22232221 46789999999999988775    35677764

>KOG0286|consensus

Probab=100.00  E-value=9.4e-34  Score=237.94  Aligned_cols=250  Identities=14%  Similarity=0.167  Sum_probs=214.7

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      .++|+||.+.|.++.|++|. +++++++.||.+.|||.-+...++.++-       ....|..++|+|.+. +++.|+.|
T Consensus        48 rr~LkGH~~Ki~~~~ws~Ds-r~ivSaSqDGklIvWDs~TtnK~haipl-------~s~WVMtCA~sPSg~-~VAcGGLd  118 (343)
T KOG0286|consen   48 RRTLKGHLNKIYAMDWSTDS-RRIVSASQDGKLIVWDSFTTNKVHAIPL-------PSSWVMTCAYSPSGN-FVACGGLD  118 (343)
T ss_pred             EEEecccccceeeeEecCCc-CeEEeeccCCeEEEEEcccccceeEEec-------CceeEEEEEECCCCC-eEEecCcC
Confidence            46899999999999999988 8999999999999999888776665443       577899999999994 99999999


Q ss_pred             CcEEEEECCCC------eeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeC
Q psy17682        238 NNVAIWNVGTG------EIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLK  311 (490)
Q Consensus       238 g~v~iwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~  311 (490)
                      +...||++.+.      ...+.+.+|.+.+.++.|-+ ...|++++.|.+..+||+++++.+..+.+|.+. +.++.++|
T Consensus       119 N~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gD-V~slsl~p  196 (343)
T KOG0286|consen  119 NKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQQTQVFHGHTGD-VMSLSLSP  196 (343)
T ss_pred             ceeEEEecccccccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccceEEEEecCCccc-EEEEecCC
Confidence            99999999855      34566889999999999987 567999999999999999999999999999997 99999999


Q ss_pred             -CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee
Q psy17682        312 -SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT  390 (490)
Q Consensus       312 -~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~  390 (490)
                       +++.+++|+   .|+..++||++.+.+...+  ..|...|+++.|.|+|.-+ ++|+.|++.++||++..+.+. ....
T Consensus       197 ~~~ntFvSg~---cD~~aklWD~R~~~c~qtF--~ghesDINsv~ffP~G~af-atGSDD~tcRlyDlRaD~~~a-~ys~  269 (343)
T KOG0286|consen  197 SDGNTFVSGG---CDKSAKLWDVRSGQCVQTF--EGHESDINSVRFFPSGDAF-ATGSDDATCRLYDLRADQELA-VYSH  269 (343)
T ss_pred             CCCCeEEecc---cccceeeeeccCcceeEee--cccccccceEEEccCCCee-eecCCCceeEEEeecCCcEEe-eecc
Confidence             899999998   7999999999988654443  3677889999999999887 899999999999999987322 2222


Q ss_pred             eeCCCceeeEEEeeCceeEEeec--ceeEEEEecCCC
Q psy17682        391 FQTPDPQRGIGMMPKRGCDVNSC--EIGRFFRLNNSG  425 (490)
Q Consensus       391 ~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~~~~  425 (490)
                      .....+|++++||..|++|.++.  ....+|+.-.++
T Consensus       270 ~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e  306 (343)
T KOG0286|consen  270 DSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGE  306 (343)
T ss_pred             CcccCCceeEEEcccccEEEeeecCCceeEeeccccc
Confidence            22336899999999999999873  377888877766

>KOG0296|consensus

Probab=100.00  E-value=2.2e-33  Score=242.60  Aligned_cols=288  Identities=19%  Similarity=0.273  Sum_probs=232.8

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      ...+.+|..|+++|.++..+|+. ++++|||.|....+|+..++.+.                                 
T Consensus        54 DdS~~tF~~H~~svFavsl~P~~-~l~aTGGgDD~AflW~~~~ge~~---------------------------------   99 (399)
T KOG0296|consen   54 DDSLVTFDKHTDSVFAVSLHPNN-NLVATGGGDDLAFLWDISTGEFA---------------------------------   99 (399)
T ss_pred             ccceeehhhcCCceEEEEeCCCC-ceEEecCCCceEEEEEccCCcce---------------------------------
Confidence            56678899999999999999955 99999999999999999886521                                 


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                                                                   ..+.+|++.|+++.|+.+| .+||||+.+|.|+||
T Consensus       100 ---------------------------------------------~eltgHKDSVt~~~Fshdg-tlLATGdmsG~v~v~  133 (399)
T KOG0296|consen  100 ---------------------------------------------GELTGHKDSVTCCSFSHDG-TLLATGDMSGKVLVF  133 (399)
T ss_pred             ---------------------------------------------eEecCCCCceEEEEEccCc-eEEEecCCCccEEEE
Confidence                                                         1346999999999999998 899999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  273 (490)
                      +..++.....+.       ..-..+.-+.|+|.+. +|++|+.||.+.+|.+.++...+.+.+|..++++-.|.|+|+.+
T Consensus       134 ~~stg~~~~~~~-------~e~~dieWl~WHp~a~-illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~  205 (399)
T KOG0296|consen  134 KVSTGGEQWKLD-------QEVEDIEWLKWHPRAH-ILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRI  205 (399)
T ss_pred             EcccCceEEEee-------cccCceEEEEeccccc-EEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceE
Confidence            999998766543       2456788899999884 99999999999999999988888999999999999999999999


Q ss_pred             EEEeCCCeEEEEeCCCCceeeeeeecCCCcee------------------------------------------------
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKAT------------------------------------------------  305 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~------------------------------------------------  305 (490)
                      +++..||+|++||+.+++++..+....+....                                                
T Consensus       206 ~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~  285 (399)
T KOG0296|consen  206 LTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEEL  285 (399)
T ss_pred             EEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhh
Confidence            99999999999999999887766521111111                                                


Q ss_pred             --EEEE---eCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        306 --RAIY---LKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       306 --~~~~---s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                        ++.+   +..=.+.|+|+   -||+|.|||+.....   .....|..+|..+.|-+ ..+| ++++.+|.|+.||.++
T Consensus       286 ~esve~~~~ss~lpL~A~G~---vdG~i~iyD~a~~~~---R~~c~he~~V~~l~w~~-t~~l-~t~c~~g~v~~wDaRt  357 (399)
T KOG0296|consen  286 DESVESIPSSSKLPLAACGS---VDGTIAIYDLAASTL---RHICEHEDGVTKLKWLN-TDYL-LTACANGKVRQWDART  357 (399)
T ss_pred             hhhhhhcccccccchhhccc---ccceEEEEecccchh---heeccCCCceEEEEEcC-cchh-eeeccCceEEeeeccc
Confidence              1111   11223455565   789999999987542   22345778899999999 7777 6888999999999999


Q ss_pred             CCCeeEEeeee-eCCCceeeEEEeeCceeEEeecc--eeEEEEe
Q psy17682        381 EPPFVHYINTF-QTPDPQRGIGMMPKRGCDVNSCE--IGRFFRL  421 (490)
Q Consensus       381 ~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~~  421 (490)
                      ++.    +..+ .|..+|..++.+|+.+++++.++  ..++|..
T Consensus       358 G~l----~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v  397 (399)
T KOG0296|consen  358 GQL----KFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEV  397 (399)
T ss_pred             cce----EEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEec
Confidence            982    2323 45678999999999999888755  5556553

>KOG0319|consensus

Probab=100.00  E-value=8.4e-34  Score=265.83  Aligned_cols=368  Identities=14%  Similarity=0.205  Sum_probs=274.9

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCC----CCCccccceecc----ccc
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPP----SEKSKSALKVTK----RSN   96 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~----~~~~~~~~~~~~----~~~   96 (490)
                      +..||.+.....+.++..|.+.|+++.|++++ .-++++|.|+.+.|||+.+-+...    ............    +..
T Consensus       173 v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~-~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~  251 (775)
T KOG0319|consen  173 VRVWNLNDKRTCLHTMILHKSAVTSLAFSEDS-LELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGE  251 (775)
T ss_pred             EEEEEcccCchHHHHHHhhhhheeeeeeccCC-ceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcce
Confidence            44566665555788899999999999999998 889999999999999996432111    111111111100    000


Q ss_pred             eeecccCCC---------C-------------------------------------------------CcccccCCeeEe
Q psy17682         97 VLDKVGGKG---------G-------------------------------------------------ANRNSTANEITI  118 (490)
Q Consensus        97 ~~~~~~~~~---------~-------------------------------------------------~~~~~~v~~~~~  118 (490)
                      .....+..+         +                                                 .+.+..|.+++|
T Consensus       252 ~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~  331 (775)
T KOG0319|consen  252 YIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKF  331 (775)
T ss_pred             EEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeee
Confidence            000000000         0                                                 000111222222


Q ss_pred             ccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC
Q psy17682        119 SEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG  198 (490)
Q Consensus       119 s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~  198 (490)
                      -    +.-...++.+++.+.+++|+..         ....+.+.||+..|.+++...+| .+|+||+.|.++++|.++++
T Consensus       332 l----G~e~~~laVATNs~~lr~y~~~---------~~~c~ii~GH~e~vlSL~~~~~g-~llat~sKD~svilWr~~~~  397 (775)
T KOG0319|consen  332 L----GPEESHLAVATNSPELRLYTLP---------TSYCQIIPGHTEAVLSLDVWSSG-DLLATGSKDKSVILWRLNNN  397 (775)
T ss_pred             c----CCccceEEEEeCCCceEEEecC---------CCceEEEeCchhheeeeeecccC-cEEEEecCCceEEEEEecCC
Confidence            1    2223567788888899999664         12334789999999999955556 79999999999999998554


Q ss_pred             CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe-----eEE----EEecCCCcEEEEEEcCC
Q psy17682        199 GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE-----IMI----QIECHPDIVYSASWNWD  269 (490)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~-----~~~----~~~~~~~~v~~~~~~~~  269 (490)
                      ....   .+.....+|...|.+++++..+..+|+++|.|+++++|++...+     .+.    ....|...|++++.+|+
T Consensus       398 ~~~~---~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~n  474 (775)
T KOG0319|consen  398 CSKS---LCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPN  474 (775)
T ss_pred             cchh---hhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCC
Confidence            4322   23444678999999999998888899999999999999997622     111    12369999999999999


Q ss_pred             CCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCC
Q psy17682        270 GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSN  349 (490)
Q Consensus       270 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~  349 (490)
                      .++|+|||.|.+.+||++.......++.+|... +.++.|+|..+++++++   .|.+|+||.+.+..+...+.  +|..
T Consensus       475 dkLiAT~SqDktaKiW~le~~~l~~vLsGH~RG-vw~V~Fs~~dq~laT~S---gD~TvKIW~is~fSClkT~e--GH~~  548 (775)
T KOG0319|consen  475 DKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRG-VWCVSFSKNDQLLATCS---GDKTVKIWSISTFSCLKTFE--GHTS  548 (775)
T ss_pred             CceEEecccccceeeecccCceEEEEeeCCccc-eEEEEeccccceeEecc---CCceEEEEEeccceeeeeec--Cccc
Confidence            999999999999999999999999999999987 99999999999999999   79999999999988654443  5888


Q ss_pred             ceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee-eCCCceeeEEEeeCceeEEeecceeEEEEe
Q psy17682        350 GVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF-QTPDPQRGIGMMPKRGCDVNSCEIGRFFRL  421 (490)
Q Consensus       350 ~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~  421 (490)
                      .|..+.|-.+|+.| ++++.||.|++|++.++.    .+..+ .|.+.|++++-+|+..++++++++.++-.+
T Consensus       549 aVlra~F~~~~~ql-iS~~adGliKlWnikt~e----C~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~w  616 (775)
T KOG0319|consen  549 AVLRASFIRNGKQL-ISAGADGLIKLWNIKTNE----CEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFW  616 (775)
T ss_pred             eeEeeeeeeCCcEE-EeccCCCcEEEEeccchh----hhhhhhhccceeEEEeecCccceeEecCCCeEEEEe
Confidence            99999999999999 788999999999999987    33333 356789999999999988877665444333

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=1.8e-32  Score=253.06  Aligned_cols=285  Identities=23%  Similarity=0.351  Sum_probs=234.2

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      +..+.+|.++|++++|+|++ .+|++++.||.+++|++.++.                                      
T Consensus         2 ~~~~~~h~~~i~~~~~~~~~-~~l~~~~~~g~i~i~~~~~~~--------------------------------------   42 (289)
T cd00200           2 RRTLKGHTGGVTCVAFSPDG-KLLATGSGDGTIKVWDLETGE--------------------------------------   42 (289)
T ss_pred             chHhcccCCCEEEEEEcCCC-CEEEEeecCcEEEEEEeeCCC--------------------------------------
Confidence            35678999999999999998 899999999999999987632                                      


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP  196 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~  196 (490)
                                                              ....+.+|...+..+.|+|++ +++++++.||.|++|++.
T Consensus        43 ----------------------------------------~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~~~~i~i~~~~   81 (289)
T cd00200          43 ----------------------------------------LLRTLKGHTGPVRDVAASADG-TYLASGSSDKTIRLWDLE   81 (289)
T ss_pred             ----------------------------------------cEEEEecCCcceeEEEECCCC-CEEEEEcCCCeEEEEEcC
Confidence                                                    011234677888999999988 899999999999999998


Q ss_pred             CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEE
Q psy17682        197 DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTT  276 (490)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  276 (490)
                      +++....       +..|...+.++.|++++. ++++++.|+.|++||+++++....+..|...+.+++|+|++.+++++
T Consensus        82 ~~~~~~~-------~~~~~~~i~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  153 (289)
T cd00200          82 TGECVRT-------LTGHTSYVSSVAFSPDGR-ILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASS  153 (289)
T ss_pred             cccceEE-------EeccCCcEEEEEEcCCCC-EEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEE
Confidence            7755443       445888999999999974 88888879999999999899888888899999999999999998888


Q ss_pred             eCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec-cCCCceeeee
Q psy17682        277 CKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-DTSNGVMFPL  355 (490)
Q Consensus       277 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~  355 (490)
                      +.++.|++||+++++....+..|... +.++.|+|+++.+++++   .++.+++||++.....   ... .+...+..+.
T Consensus       154 ~~~~~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~---~~~~i~i~d~~~~~~~---~~~~~~~~~i~~~~  226 (289)
T cd00200         154 SQDGTIKLWDLRTGKCVATLTGHTGE-VNSVAFSPDGEKLLSSS---SDGTIKLWDLSTGKCL---GTLRGHENGVNSVA  226 (289)
T ss_pred             cCCCcEEEEEccccccceeEecCccc-cceEEECCCcCEEEEec---CCCcEEEEECCCCcee---cchhhcCCceEEEE
Confidence            88999999999998888888877654 99999999998888887   5899999999875432   222 4556899999


Q ss_pred             ecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--eeEEEE
Q psy17682        356 YDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--IGRFFR  420 (490)
Q Consensus       356 ~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~  420 (490)
                      |+|++.++ ++++.||.|++|++.++++. ..+.  .+...+.+++|+|++.++++++.  .+++|+
T Consensus       227 ~~~~~~~~-~~~~~~~~i~i~~~~~~~~~-~~~~--~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         227 FSPDGYLL-ASGSEDGTIRVWDLRTGECV-QTLS--GHTNSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             EcCCCcEE-EEEcCCCcEEEEEcCCceeE-EEcc--ccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            99997776 67777999999999987632 2222  34568999999999888787644  556663

>KOG0273|consensus

Probab=100.00  E-value=4.1e-33  Score=248.37  Aligned_cols=279  Identities=15%  Similarity=0.308  Sum_probs=237.9

Q ss_pred             ceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccccc
Q psy17682         45 RRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVK  124 (490)
Q Consensus        45 ~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  124 (490)
                      ..|++++|+.+| .+||+|+.||.+|||+...+....                   +     ..+...|.++.|+.++  
T Consensus       236 kdVT~L~Wn~~G-~~LatG~~~G~~riw~~~G~l~~t-------------------l-----~~HkgPI~slKWnk~G--  288 (524)
T KOG0273|consen  236 KDVTSLDWNNDG-TLLATGSEDGEARIWNKDGNLIST-------------------L-----GQHKGPIFSLKWNKKG--  288 (524)
T ss_pred             CCcceEEecCCC-CeEEEeecCcEEEEEecCchhhhh-------------------h-----hccCCceEEEEEcCCC--
Confidence            579999999999 999999999999999988754211                   1     1123368889998875  


Q ss_pred             ceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccc
Q psy17682        125 EFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL  204 (490)
Q Consensus       125 ~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  204 (490)
                         .++.+++-|+++.+|+..     .+.   ..+.+.-|..+-..+.|-.+  .-+++++.|+.|+++.+....     
T Consensus       289 ---~yilS~~vD~ttilwd~~-----~g~---~~q~f~~~s~~~lDVdW~~~--~~F~ts~td~~i~V~kv~~~~-----  350 (524)
T KOG0273|consen  289 ---TYILSGGVDGTTILWDAH-----TGT---VKQQFEFHSAPALDVDWQSN--DEFATSSTDGCIHVCKVGEDR-----  350 (524)
T ss_pred             ---CEEEeccCCccEEEEecc-----Cce---EEEeeeeccCCccceEEecC--ceEeecCCCceEEEEEecCCC-----
Confidence               578899999999999984     333   34466678888788999853  579999999999999987664     


Q ss_pred             ccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC---------CEEEE
Q psy17682        205 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG---------SKLLT  275 (490)
Q Consensus       205 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~---------~~l~~  275 (490)
                        |..++.+|.+.|.++.|+|.+. +|++++.|++++||.+........+..|...|..+.|+|+|         ..+++
T Consensus       351 --P~~t~~GH~g~V~alk~n~tg~-LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~s  427 (524)
T KOG0273|consen  351 --PVKTFIGHHGEVNALKWNPTGS-LLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLAS  427 (524)
T ss_pred             --cceeeecccCceEEEEECCCCc-eEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEE
Confidence              4445667999999999999995 99999999999999999999999999999999999999965         37899


Q ss_pred             EeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeee
Q psy17682        276 TCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPL  355 (490)
Q Consensus       276 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~  355 (490)
                      ++.|++|++||+..+.++.++..|..+ +++++|+|+|+++++|+   .|+.|.+|+.++++   .+........|..++
T Consensus       428 as~dstV~lwdv~~gv~i~~f~kH~~p-VysvafS~~g~ylAsGs---~dg~V~iws~~~~~---l~~s~~~~~~Ifel~  500 (524)
T KOG0273|consen  428 ASFDSTVKLWDVESGVPIHTLMKHQEP-VYSVAFSPNGRYLASGS---LDGCVHIWSTKTGK---LVKSYQGTGGIFELC  500 (524)
T ss_pred             eecCCeEEEEEccCCceeEeeccCCCc-eEEEEecCCCcEEEecC---CCCeeEeccccchh---eeEeecCCCeEEEEE
Confidence            999999999999999999999888875 99999999999999999   89999999999876   345555667899999


Q ss_pred             ecCCCCeEEEEecCCCeEEEEEec
Q psy17682        356 YDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       356 ~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      |+.+|.+| ..+-.|+.+.+-|++
T Consensus       501 Wn~~G~kl-~~~~sd~~vcvldlr  523 (524)
T KOG0273|consen  501 WNAAGDKL-GACASDGSVCVLDLR  523 (524)
T ss_pred             EcCCCCEE-EEEecCCCceEEEec
Confidence            99999998 555679999998875

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=2.5e-32  Score=285.08  Aligned_cols=297  Identities=15%  Similarity=0.157  Sum_probs=229.1

Q ss_pred             ecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEe
Q psy17682         39 DLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITI  118 (490)
Q Consensus        39 ~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  118 (490)
                      .+.+|...|.+++|+|++ .+|+|||.|+.|+||+......... ...         .......      ....+.+++|
T Consensus       478 ~~~~~~~~V~~i~fs~dg-~~latgg~D~~I~iwd~~~~~~~~~-~~~---------~~~~~~~------~~~~v~~l~~  540 (793)
T PLN00181        478 DLLNSSNLVCAIGFDRDG-EFFATAGVNKKIKIFECESIIKDGR-DIH---------YPVVELA------SRSKLSGICW  540 (793)
T ss_pred             cccCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEECCccccccc-ccc---------cceEEec------ccCceeeEEe
Confidence            356699999999999999 8999999999999999764211000 000         0000000      1225678888


Q ss_pred             ccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC
Q psy17682        119 SEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG  198 (490)
Q Consensus       119 s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~  198 (490)
                      ++..    ...+++++.+|.+++|++.     .   ...+..+.+|.+.|++++|+|.++.+|++|+.||+|++||+.++
T Consensus       541 ~~~~----~~~las~~~Dg~v~lWd~~-----~---~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~  608 (793)
T PLN00181        541 NSYI----KSQVASSNFEGVVQVWDVA-----R---SQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG  608 (793)
T ss_pred             ccCC----CCEEEEEeCCCeEEEEECC-----C---CeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCC
Confidence            7653    2357889999999999985     1   22455678999999999999744489999999999999999887


Q ss_pred             CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe-eEEEEecCCCcEEEEEEcCCCCEEEEEe
Q psy17682        199 GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE-IMIQIECHPDIVYSASWNWDGSKLLTTC  277 (490)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~  277 (490)
                      ..+..+.        +...+.++.|++....+|++|+.||.|++||+++.+ .+..+.+|...|.++.|. ++..|++++
T Consensus       609 ~~~~~~~--------~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s  679 (793)
T PLN00181        609 VSIGTIK--------TKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSS  679 (793)
T ss_pred             cEEEEEe--------cCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEE
Confidence            6655432        346799999976534699999999999999998765 567778899999999997 678999999


Q ss_pred             CCCeEEEEeCCCC------ceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEE--------
Q psy17682        278 KDKKMRIINPRTG------AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMV--------  343 (490)
Q Consensus       278 ~dg~i~iwd~~~~------~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~--------  343 (490)
                      .|++|++||++.+      .++..+.+|... +..+.|++++.+|++|+   .|+.+++|+...........        
T Consensus       680 ~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~-i~~v~~s~~~~~lasgs---~D~~v~iw~~~~~~~~~s~~~~~~~~~~  755 (793)
T PLN00181        680 TDNTLKLWDLSMSISGINETPLHSFMGHTNV-KNFVGLSVSDGYIATGS---ETNEVFVYHKAFPMPVLSYKFKTIDPVS  755 (793)
T ss_pred             CCCEEEEEeCCCCccccCCcceEEEcCCCCC-eeEEEEcCCCCEEEEEe---CCCEEEEEECCCCCceEEEecccCCccc
Confidence            9999999999853      466777788764 88999999999999998   78999999986543221111        


Q ss_pred             ---eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEe
Q psy17682        344 ---ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEI  378 (490)
Q Consensus       344 ---~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~  378 (490)
                         ...+...|.+++|+|++..| ++|+.||.|+||++
T Consensus       756 ~~~~~~~~~~V~~v~ws~~~~~l-va~~~dG~I~i~~~  792 (793)
T PLN00181        756 GLEVDDASQFISSVCWRGQSSTL-VAANSTGNIKILEM  792 (793)
T ss_pred             ccccCCCCcEEEEEEEcCCCCeE-EEecCCCcEEEEec
Confidence               11233458999999999998 78889999999986

>KOG0278|consensus

Probab=100.00  E-value=5.7e-34  Score=234.02  Aligned_cols=288  Identities=18%  Similarity=0.270  Sum_probs=243.4

Q ss_pred             EEecccccceeeeEEecc---CCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         37 VVDLLYHQRRVGLVLWHP---TAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p---~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      -.+..||+.+|..++|+|   +| .+|+|+++|+.-++=+-.+|.                                   
T Consensus         7 pl~c~ghtrpvvdl~~s~itp~g-~flisa~kd~~pmlr~g~tgd-----------------------------------   50 (334)
T KOG0278|consen    7 PLTCHGHTRPVVDLAFSPITPDG-YFLISASKDGKPMLRNGDTGD-----------------------------------   50 (334)
T ss_pred             ceEEcCCCcceeEEeccCCCCCc-eEEEEeccCCCchhccCCCCC-----------------------------------
Confidence            356789999999999997   45 789999998886653222221                                   


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                                                                 -+-++.||++.|++..++.+. .+.++++.|-+-++|
T Consensus        51 -------------------------------------------wigtfeghkgavw~~~l~~na-~~aasaaadftakvw   86 (334)
T KOG0278|consen   51 -------------------------------------------WIGTFEGHKGAVWSATLNKNA-TRAASAAADFTAKVW   86 (334)
T ss_pred             -------------------------------------------cEEeeeccCcceeeeecCchh-hhhhhhcccchhhhh
Confidence                                                       233678999999999999866 889999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe-eEEEEecCCCcEEEEEEcCCCCE
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE-IMIQIECHPDIVYSASWNWDGSK  272 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~  272 (490)
                      |.-+|..+..+.        |..-|..++|+.+. +.|++|+.+..+||||++..+ +...+.+|.+.|..+.|....+.
T Consensus        87 ~a~tgdelhsf~--------hkhivk~~af~~ds-~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~  157 (334)
T KOG0278|consen   87 DAVTGDELHSFE--------HKHIVKAVAFSQDS-NYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKC  157 (334)
T ss_pred             hhhhhhhhhhhh--------hhheeeeEEecccc-hhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCce
Confidence            999999888775        88899999999998 589999999999999998765 56778899999999999999999


Q ss_pred             EEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCcee
Q psy17682        273 LLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVM  352 (490)
Q Consensus       273 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~  352 (490)
                      |++.+.|++||+||.+++..++++.-..  +++++.++++|+++.++.    .+.|.+||..+...   +....-...|.
T Consensus       158 iLSSadd~tVRLWD~rTgt~v~sL~~~s--~VtSlEvs~dG~ilTia~----gssV~Fwdaksf~~---lKs~k~P~nV~  228 (334)
T KOG0278|consen  158 ILSSADDKTVRLWDHRTGTEVQSLEFNS--PVTSLEVSQDGRILTIAY----GSSVKFWDAKSFGL---LKSYKMPCNVE  228 (334)
T ss_pred             EEeeccCCceEEEEeccCcEEEEEecCC--CCcceeeccCCCEEEEec----CceeEEeccccccc---eeeccCccccc
Confidence            9999999999999999999999887443  499999999999999985    78899999998763   34445566799


Q ss_pred             eeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--ceeEEEEecCCC
Q psy17682        353 FPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFRLNNSG  425 (490)
Q Consensus       353 ~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~~~~  425 (490)
                      +...+|+...+ ++|+.|..++.||..++..+...  .-.+.++|.++.|+|+|.+.++++  +.+|+|....++
T Consensus       229 SASL~P~k~~f-VaGged~~~~kfDy~TgeEi~~~--nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~  300 (334)
T KOG0278|consen  229 SASLHPKKEFF-VAGGEDFKVYKFDYNTGEEIGSY--NKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGK  300 (334)
T ss_pred             cccccCCCceE-EecCcceEEEEEeccCCceeeec--ccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCC
Confidence            99999998665 89999999999999999844322  235668999999999999988884  588999988876

>KOG0283|consensus

Probab=100.00  E-value=2.5e-33  Score=267.53  Aligned_cols=304  Identities=14%  Similarity=0.215  Sum_probs=218.5

Q ss_pred             cc-cccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCC---CccccceeccccceeecccCCCCCcccccCCe
Q psy17682         40 LL-YHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSE---KSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        40 l~-gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      +. .|.+.|.++.|+++| ++|||||+|+.|+||.+...+...-.   ..........+..                +..
T Consensus       262 ~~~ah~gaIw~mKFS~DG-KyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~----------------~~p  324 (712)
T KOG0283|consen  262 ISNAHKGAIWAMKFSHDG-KYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQ----------------IEP  324 (712)
T ss_pred             cccccCCcEEEEEeCCCC-ceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccc----------------cCc
Confidence            45 899999999999999 99999999999999998874321100   0000000000110                000


Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI  195 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~  195 (490)
                      +..++.................. .+++..    ...-..++++.+.||.+.|..+.|+.+  ++|++++.|.+||||++
T Consensus       325 ~~s~~~~~~~~~s~~~~~~~s~~-~~~p~~----~f~f~ekP~~ef~GHt~DILDlSWSKn--~fLLSSSMDKTVRLWh~  397 (712)
T KOG0283|consen  325 STSSEEKISSRTSSSRKGSQSPC-VLLPLK----AFVFSEKPFCEFKGHTADILDLSWSKN--NFLLSSSMDKTVRLWHP  397 (712)
T ss_pred             cccccccccccccccccccCCcc-ccCCCc----cccccccchhhhhccchhheecccccC--CeeEeccccccEEeecC
Confidence            11111000000000111111112 222222    112224467789999999999999974  59999999999999999


Q ss_pred             CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEE
Q psy17682        196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLT  275 (490)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  275 (490)
                      ....+++.+.        |...|+|++|+|..+++|++|+-||.||||++...+.+.-.. -..-|++++|.|+|+..++
T Consensus       398 ~~~~CL~~F~--------HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~D-l~~lITAvcy~PdGk~avI  468 (712)
T KOG0283|consen  398 GRKECLKVFS--------HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWND-LRDLITAVCYSPDGKGAVI  468 (712)
T ss_pred             CCcceeeEEe--------cCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehh-hhhhheeEEeccCCceEEE
Confidence            9999988765        999999999999988999999999999999998777665544 4578999999999999999


Q ss_pred             EeCCCeEEEEeCCCCceeeeeee--c-----CCCceeEEEEeCCC--cEEEEEeCCCceeEEEEecCCCCCCCeEEEecc
Q psy17682        276 TCKDKKMRIINPRTGAIEEEAVC--H-----EGSKATRAIYLKSG--LIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD  346 (490)
Q Consensus       276 ~~~dg~i~iwd~~~~~~~~~~~~--~-----~~~~~~~~~~s~~~--~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~  346 (490)
                      |+.+|.+++|+....+.......  +     .+.+|+.+.|.|..  ++|++.    .|..|+|+|.+.......+..+.
T Consensus       469 Gt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTS----nDSrIRI~d~~~~~lv~KfKG~~  544 (712)
T KOG0283|consen  469 GTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTS----NDSRIRIYDGRDKDLVHKFKGFR  544 (712)
T ss_pred             EEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEec----CCCceEEEeccchhhhhhhcccc
Confidence            99999999999998776555431  1     12259999998763  367766    59999999997655555555555


Q ss_pred             CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        347 TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       347 ~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      ....-....|+.||++| ++++.|..|++|++...
T Consensus       545 n~~SQ~~Asfs~Dgk~I-Vs~seDs~VYiW~~~~~  578 (712)
T KOG0283|consen  545 NTSSQISASFSSDGKHI-VSASEDSWVYIWKNDSF  578 (712)
T ss_pred             cCCcceeeeEccCCCEE-EEeecCceEEEEeCCCC
Confidence            55556778999999999 78999999999998654

>KOG0293|consensus

Probab=100.00  E-value=5.5e-33  Score=243.57  Aligned_cols=297  Identities=16%  Similarity=0.209  Sum_probs=231.1

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      .+....|..|.+.|.-+.||++| ++|||+++|.+..||.+....                                   
T Consensus       214 ~qt~qil~~htdEVWfl~FS~nG-kyLAsaSkD~Taiiw~v~~d~-----------------------------------  257 (519)
T KOG0293|consen  214 SQTWQILQDHTDEVWFLQFSHNG-KYLASASKDSTAIIWIVVYDV-----------------------------------  257 (519)
T ss_pred             chhhhhHhhCCCcEEEEEEcCCC-eeEeeccCCceEEEEEEecCc-----------------------------------
Confidence            34445789999999999999999 999999999999999765422                                   


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                                              .+                +...++.||..+|.-+.|+||+ ++|++|+.|..+++|
T Consensus       258 ------------------------~~----------------kl~~tlvgh~~~V~yi~wSPDd-ryLlaCg~~e~~~lw  296 (519)
T KOG0293|consen  258 ------------------------HF----------------KLKKTLVGHSQPVSYIMWSPDD-RYLLACGFDEVLSLW  296 (519)
T ss_pred             ------------------------ce----------------eeeeeeecccCceEEEEECCCC-CeEEecCchHheeec
Confidence                                    00                1223677999999999999998 899999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecC-CCcEEEEEEcCCCCE
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH-PDIVYSASWNWDGSK  272 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~  272 (490)
                      |+.+|.+...+..      ++...+.+++|.|||. .+++|+.|+.+..||++ |......++. ...|.+++..+||++
T Consensus       297 Dv~tgd~~~~y~~------~~~~S~~sc~W~pDg~-~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dgk~  368 (519)
T KOG0293|consen  297 DVDTGDLRHLYPS------GLGFSVSSCAWCPDGF-RFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYDGKY  368 (519)
T ss_pred             cCCcchhhhhccc------CcCCCcceeEEccCCc-eeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcCCCcE
Confidence            9999998877653      2567899999999995 89999999999999985 4444444432 356999999999999


Q ss_pred             EEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCcee
Q psy17682        273 LLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVM  352 (490)
Q Consensus       273 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~  352 (490)
                      +++.+.|..|++|+..+.........+.  ++++...|.+|+++.+.-   .+..+++||+.....+..........-+.
T Consensus       369 vl~v~~d~~i~l~~~e~~~dr~lise~~--~its~~iS~d~k~~LvnL---~~qei~LWDl~e~~lv~kY~Ghkq~~fiI  443 (519)
T KOG0293|consen  369 VLLVTVDKKIRLYNREARVDRGLISEEQ--PITSFSISKDGKLALVNL---QDQEIHLWDLEENKLVRKYFGHKQGHFII  443 (519)
T ss_pred             EEEEecccceeeechhhhhhhccccccC--ceeEEEEcCCCcEEEEEc---ccCeeEEeecchhhHHHHhhcccccceEE
Confidence            9999999999999988766554444333  499999999999998887   68899999999544333333222222355


Q ss_pred             eeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce-eEEee--cceeEEEEecC
Q psy17682        353 FPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG-CDVNS--CEIGRFFRLNN  423 (490)
Q Consensus       353 ~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~--~~~~~~~~~~~  423 (490)
                      .-+|.--...++++|+.|+.|+||+..+++++ ..+.  +|...|++++|+|... +++++  ++++|+|....
T Consensus       444 rSCFgg~~~~fiaSGSED~kvyIWhr~sgkll-~~Ls--GHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~  514 (519)
T KOG0293|consen  444 RSCFGGGNDKFIASGSEDSKVYIWHRISGKLL-AVLS--GHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD  514 (519)
T ss_pred             EeccCCCCcceEEecCCCceEEEEEccCCcee-Eeec--CCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence            55676555444499999999999999999843 2332  3457899999999764 45555  44889998764

>KOG0295|consensus

Probab=100.00  E-value=3.5e-32  Score=235.04  Aligned_cols=279  Identities=16%  Similarity=0.264  Sum_probs=236.8

Q ss_pred             cccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCc
Q psy17682        110 NSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCV  189 (490)
Q Consensus       110 ~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~  189 (490)
                      ...+..+-+.|.     ..++++++.+++|++|+..     ++++   .+.++||.+.|..++|+..| .++++++.|-.
T Consensus       108 r~~vt~v~~hp~-----~~~v~~as~d~tikv~D~~-----tg~~---e~~LrGHt~sv~di~~~a~G-k~l~tcSsDl~  173 (406)
T KOG0295|consen  108 RSSVTRVIFHPS-----EALVVSASEDATIKVFDTE-----TGEL---ERSLRGHTDSVFDISFDASG-KYLATCSSDLS  173 (406)
T ss_pred             ccceeeeeeccC-----ceEEEEecCCceEEEEEcc-----chhh---hhhhhccccceeEEEEecCc-cEEEecCCccc
Confidence            446777778887     5778888999999999994     4443   66889999999999999988 89999999999


Q ss_pred             EEEEECCCC-CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC
Q psy17682        190 VKVWQIPDG-GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW  268 (490)
Q Consensus       190 i~iwd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~  268 (490)
                      +++||..+. ++++       .+.+|...|.++.|-|.|. .+++++.|.+|+.|++.++.++.++.+|...|..++.+.
T Consensus       174 ~~LWd~~~~~~c~k-------s~~gh~h~vS~V~f~P~gd-~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~  245 (406)
T KOG0295|consen  174 AKLWDFDTFFRCIK-------SLIGHEHGVSSVFFLPLGD-HILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQ  245 (406)
T ss_pred             hhheeHHHHHHHHH-------HhcCcccceeeEEEEecCC-eeeecccccceeEEecccceeEEeccCchHhEEEEEecC
Confidence            999998653 2333       3557999999999999995 999999999999999999999999999999999999999


Q ss_pred             CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC---------------CcEEEEEeCCCceeEEEEecC
Q psy17682        269 DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS---------------GLIFTTGFSKMSERQYSLRAP  333 (490)
Q Consensus       269 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~---------------~~~l~~~~~~~~~~~i~iwd~  333 (490)
                      ||.++++++.|.++++|-+.++++...+..|... +-+++|.|.               +.++.+++   .|++|++||+
T Consensus       246 DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~-vEci~wap~~~~~~i~~at~~~~~~~~l~s~S---rDktIk~wdv  321 (406)
T KOG0295|consen  246 DGTIIASCSNDQTLRVWVVATKQCKAELREHEHP-VECIAWAPESSYPSISEATGSTNGGQVLGSGS---RDKTIKIWDV  321 (406)
T ss_pred             CeeEEEecCCCceEEEEEeccchhhhhhhccccc-eEEEEecccccCcchhhccCCCCCccEEEeec---ccceEEEEec
Confidence            9999999999999999999999988888888875 888888763               35888888   8999999999


Q ss_pred             CCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec
Q psy17682        334 DHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC  413 (490)
Q Consensus       334 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~  413 (490)
                      .++.+...+  .+|.+.|..++|+|.|+|| +++..|+++++||+++.+. ...+.  .+..-++++.|..+..++++|+
T Consensus       322 ~tg~cL~tL--~ghdnwVr~~af~p~Gkyi-~ScaDDktlrvwdl~~~~c-mk~~~--ah~hfvt~lDfh~~~p~VvTGs  395 (406)
T KOG0295|consen  322 STGMCLFTL--VGHDNWVRGVAFSPGGKYI-LSCADDKTLRVWDLKNLQC-MKTLE--AHEHFVTSLDFHKTAPYVVTGS  395 (406)
T ss_pred             cCCeEEEEE--ecccceeeeeEEcCCCeEE-EEEecCCcEEEEEecccee-eeccC--CCcceeEEEecCCCCceEEecc
Confidence            998765444  3688899999999999999 7888999999999999873 22333  3445899999999988888874


Q ss_pred             c--eeEEEE
Q psy17682        414 E--IGRFFR  420 (490)
Q Consensus       414 ~--~~~~~~  420 (490)
                      =  ..++|.
T Consensus       396 Vdqt~KvwE  404 (406)
T KOG0295|consen  396 VDQTVKVWE  404 (406)
T ss_pred             ccceeeeee
Confidence            3  555553

>KOG0643|consensus

Probab=100.00  E-value=6.3e-32  Score=224.15  Aligned_cols=289  Identities=18%  Similarity=0.246  Sum_probs=227.8

Q ss_pred             EecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeE
Q psy17682         38 VDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEIT  117 (490)
Q Consensus        38 ~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  117 (490)
                      ..|.||..+++.|.|+.+| ++|+||++|.++.+|-..+|+                                       
T Consensus         4 i~l~GHERplTqiKyN~eG-DLlFscaKD~~~~vw~s~nGe---------------------------------------   43 (327)
T KOG0643|consen    4 ILLQGHERPLTQIKYNREG-DLLFSCAKDSTPTVWYSLNGE---------------------------------------   43 (327)
T ss_pred             cccccCccccceEEecCCC-cEEEEecCCCCceEEEecCCc---------------------------------------
Confidence            4588999999999999999 999999999999999765544                                       


Q ss_pred             eccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCC
Q psy17682        118 ISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPD  197 (490)
Q Consensus       118 ~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~  197 (490)
                                                             .+-++.||++.|+|++.+.+. .++++|+.|.++++||+++
T Consensus        44 ---------------------------------------rlGty~GHtGavW~~Did~~s-~~liTGSAD~t~kLWDv~t   83 (327)
T KOG0643|consen   44 ---------------------------------------RLGTYDGHTGAVWCCDIDWDS-KHLITGSADQTAKLWDVET   83 (327)
T ss_pred             ---------------------------------------eeeeecCCCceEEEEEecCCc-ceeeeccccceeEEEEcCC
Confidence                                                   122578999999999999877 8999999999999999999


Q ss_pred             CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC-----CCcEEEEECC-------CCeeEEEEecCCCcEEEEE
Q psy17682        198 GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS-----DNNVAIWNVG-------TGEIMIQIECHPDIVYSAS  265 (490)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-----dg~v~iwd~~-------~~~~~~~~~~~~~~v~~~~  265 (490)
                      |+++..+.        ...+|..+.|+++|. +++....     .+.|.++|++       +.++...+..+...++.+-
T Consensus        84 Gk~la~~k--------~~~~Vk~~~F~~~gn-~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~  154 (327)
T KOG0643|consen   84 GKQLATWK--------TNSPVKRVDFSFGGN-LILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSAL  154 (327)
T ss_pred             CcEEEEee--------cCCeeEEEeeccCCc-EEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeee
Confidence            99988765        567899999999995 6555433     4679999998       4556788888889999999


Q ss_pred             EcCCCCEEEEEeCCCeEEEEeCCCCce-eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe
Q psy17682        266 WNWDGSKLLTTCKDKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE  344 (490)
Q Consensus       266 ~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~  344 (490)
                      |.|-+++|++|..||.|.+||+++++. +.....|.. .|+.+.++++..++++++   .|.+-++||.++.+..   ..
T Consensus       155 Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~-~Ind~q~s~d~T~FiT~s---~Dttakl~D~~tl~v~---Kt  227 (327)
T KOG0643|consen  155 WGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSS-KINDLQFSRDRTYFITGS---KDTTAKLVDVRTLEVL---KT  227 (327)
T ss_pred             ecccCCEEEEecCCCcEEEEEcccCceeeechhhhcc-ccccccccCCcceEEecc---cCccceeeeccceeeE---EE
Confidence            999999999999999999999999854 444456666 499999999999999999   7999999999987643   33


Q ss_pred             ccCCCceeeeeecCCCCeEEEEecCCC-eEEEEEecCCC---Ce-----eEEeeeee-CCCceeeEEEeeCceeEEeecc
Q psy17682        345 LDTSNGVMFPLYDPDTNLVYLCGKGDS-VIRYFEITAEP---PF-----VHYINTFQ-TPDPQRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       345 ~~~~~~i~~~~~s~~~~~l~~~g~~dg-~i~iwd~~~~~---~~-----~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~  414 (490)
                      .....++++.+++|...++++.|+.+- .|.-=+.+.++   .+     .+.+.+.+ |=+||++++|+|+|....+|++
T Consensus       228 y~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGE  307 (327)
T KOG0643|consen  228 YTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGE  307 (327)
T ss_pred             eeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCC
Confidence            445678999999999998855554442 12211222221   00     01222233 3379999999999999888866


Q ss_pred             --eeEEEEec
Q psy17682        415 --IGRFFRLN  422 (490)
Q Consensus       415 --~~~~~~~~  422 (490)
                        .+|+..++
T Consensus       308 DG~VR~h~Fd  317 (327)
T KOG0643|consen  308 DGYVRLHHFD  317 (327)
T ss_pred             CceEEEEEec
Confidence              55555444

>KOG1407|consensus

Probab=100.00  E-value=1e-31  Score=222.21  Aligned_cols=279  Identities=17%  Similarity=0.248  Sum_probs=240.0

Q ss_pred             EecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeE
Q psy17682         38 VDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEIT  117 (490)
Q Consensus        38 ~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  117 (490)
                      ..+.+|...|.+|+|+-+| ..|++|+.|+++++|++....+..                                    
T Consensus        14 r~~~~~~~~v~Sv~wn~~g-~~lasgs~dktv~v~n~e~~r~~~------------------------------------   56 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNCDG-TKLASGSFDKTVSVWNLERDRFRK------------------------------------   56 (313)
T ss_pred             HHhhhhhhcceEEEEcccC-ceeeecccCCceEEEEecchhhhh------------------------------------
Confidence            5688999999999999999 999999999999999987643110                                    


Q ss_pred             eccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCC
Q psy17682        118 ISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPD  197 (490)
Q Consensus       118 ~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~  197 (490)
                                                              -...++|.+.|..++|+|....++++++.|.+|++||++.
T Consensus        57 ----------------------------------------~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~   96 (313)
T KOG1407|consen   57 ----------------------------------------ELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRS   96 (313)
T ss_pred             ----------------------------------------hhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEecc
Confidence                                                    0023589999999999998889999999999999999999


Q ss_pred             CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe
Q psy17682        198 GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC  277 (490)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  277 (490)
                      +++...+.        ....-.-+.|+|+|. +++.++.|..|.+.|.++.+.+...+ ....+..++|+-++.+++...
T Consensus        97 ~k~~~~i~--------~~~eni~i~wsp~g~-~~~~~~kdD~it~id~r~~~~~~~~~-~~~e~ne~~w~~~nd~Fflt~  166 (313)
T KOG1407|consen   97 GKCTARIE--------TKGENINITWSPDGE-YIAVGNKDDRITFIDARTYKIVNEEQ-FKFEVNEISWNNSNDLFFLTN  166 (313)
T ss_pred             CcEEEEee--------ccCcceEEEEcCCCC-EEEEecCcccEEEEEecccceeehhc-ccceeeeeeecCCCCEEEEec
Confidence            98877654        233345678999996 89999999999999999988877766 566788899998778887777


Q ss_pred             CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeec
Q psy17682        278 KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYD  357 (490)
Q Consensus       278 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s  357 (490)
                      ..|+|.|.....-+++.++..|... ..++.|+|+|++||+|+   .|..+.+||+...-+...+..  +.-+|..+.||
T Consensus       167 GlG~v~ILsypsLkpv~si~AH~sn-CicI~f~p~GryfA~Gs---ADAlvSLWD~~ELiC~R~isR--ldwpVRTlSFS  240 (313)
T KOG1407|consen  167 GLGCVEILSYPSLKPVQSIKAHPSN-CICIEFDPDGRYFATGS---ADALVSLWDVDELICERCISR--LDWPVRTLSFS  240 (313)
T ss_pred             CCceEEEEeccccccccccccCCcc-eEEEEECCCCceEeecc---ccceeeccChhHhhhheeecc--ccCceEEEEec
Confidence            7899999999999999999999876 89999999999999999   799999999998877666654  44679999999


Q ss_pred             CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc
Q psy17682        358 PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       358 ~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  414 (490)
                      .||++| |+|+.|..|-|=++.+|.    .+.......+...++|+|+..+|+-+++
T Consensus       241 ~dg~~l-ASaSEDh~IDIA~vetGd----~~~eI~~~~~t~tVAWHPk~~LLAyA~d  292 (313)
T KOG1407|consen  241 HDGRML-ASASEDHFIDIAEVETGD----RVWEIPCEGPTFTVAWHPKRPLLAYACD  292 (313)
T ss_pred             cCccee-eccCccceEEeEecccCC----eEEEeeccCCceeEEecCCCceeeEEec
Confidence            999999 899999999999999998    5566677789999999999999887754

>KOG0640|consensus

Probab=100.00  E-value=3.7e-32  Score=230.05  Aligned_cols=318  Identities=14%  Similarity=0.202  Sum_probs=247.7

Q ss_pred             CCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccc
Q psy17682         31 RTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRN  110 (490)
Q Consensus        31 ~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (490)
                      ....-+...+..|++++.+.+|+|+| .+++|||.|.+|+|.|...-....              .......        
T Consensus        99 e~~~yEt~ylt~HK~~cR~aafs~DG-~lvATGsaD~SIKildvermlaks--------------~~~em~~--------  155 (430)
T KOG0640|consen   99 EPSEYETKYLTSHKSPCRAAAFSPDG-SLVATGSADASIKILDVERMLAKS--------------KPKEMIS--------  155 (430)
T ss_pred             CCcccceEEEeecccceeeeeeCCCC-cEEEccCCcceEEEeehhhhhhhc--------------chhhhcc--------
Confidence            44455566799999999999999999 999999999999999987522100              0000000        


Q ss_pred             ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcE
Q psy17682        111 STANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVV  190 (490)
Q Consensus       111 ~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i  190 (490)
                                            +                .+...-+.++++..|.++|+++.|+|.. .+|++|+.|++|
T Consensus       156 ----------------------~----------------~~qa~hPvIRTlYDH~devn~l~FHPre-~ILiS~srD~tv  196 (430)
T KOG0640|consen  156 ----------------------G----------------DTQARHPVIRTLYDHVDEVNDLDFHPRE-TILISGSRDNTV  196 (430)
T ss_pred             ----------------------C----------------CcccCCceEeehhhccCcccceeecchh-heEEeccCCCeE
Confidence                                  0                1111123567888999999999999987 899999999999


Q ss_pred             EEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe---cCCCcEEEEEEc
Q psy17682        191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE---CHPDIVYSASWN  267 (490)
Q Consensus       191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---~~~~~v~~~~~~  267 (490)
                      +++|+......+.++     ......+|.++.|+|.|+ +|+.|....++++||+.+.++...-.   .|.+.|+++.++
T Consensus       197 KlFDfsK~saKrA~K-----~~qd~~~vrsiSfHPsGe-fllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys  270 (430)
T KOG0640|consen  197 KLFDFSKTSAKRAFK-----VFQDTEPVRSISFHPSGE-FLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYS  270 (430)
T ss_pred             EEEecccHHHHHHHH-----HhhccceeeeEeecCCCc-eEEEecCCCceeEEeccceeEeeecCcccccccceeEEEec
Confidence            999987654433332     112457899999999997 89999999999999999888665432   689999999999


Q ss_pred             CCCCEEEEEeCCCeEEEEeCCCCceeeeee-ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc
Q psy17682        268 WDGSKLLTTCKDKKMRIINPRTGAIEEEAV-CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD  346 (490)
Q Consensus       268 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~  346 (490)
                      +.+++.++++.||.|++||--+++++.++. .|.+..+++..|..+|+++.+++   .|..+++|.+.++.........+
T Consensus       271 ~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG---~DS~vkLWEi~t~R~l~~YtGAg  347 (430)
T KOG0640|consen  271 STGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSG---KDSTVKLWEISTGRMLKEYTGAG  347 (430)
T ss_pred             CCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecC---CcceeeeeeecCCceEEEEecCC
Confidence            999999999999999999999999998887 78888899999999999999887   79999999999987655554432


Q ss_pred             CCC---ceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--eeEEEEe
Q psy17682        347 TSN---GVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--IGRFFRL  421 (490)
Q Consensus       347 ~~~---~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~~  421 (490)
                      ..+   .-+...|+....|++.---..+.+.-||.++....  .+..+.|.++++.+.-||.+...++.++  ..|+|.-
T Consensus       348 ~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~--~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyr  425 (430)
T KOG0640|consen  348 TTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRV--ALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYR  425 (430)
T ss_pred             cccchhhhhhhhhcCccceEEccccccCceeeccccchhhh--hhcccCCCCCceEEEeCCCCCceeeecccceeeeeee
Confidence            222   13556788888888655455678999999987632  4455678889999999999877666544  5677764

>KOG0275|consensus

Probab=100.00  E-value=6.4e-33  Score=236.08  Aligned_cols=291  Identities=16%  Similarity=0.231  Sum_probs=232.6

Q ss_pred             cccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccc
Q psy17682         42 YHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISED  121 (490)
Q Consensus        42 gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  121 (490)
                      |...-+.|..|+|++ .+|+||+.||.|.+|+..+|+....              ...                      
T Consensus       211 g~KSh~EcA~FSPDg-qyLvsgSvDGFiEVWny~~GKlrKD--------------LkY----------------------  253 (508)
T KOG0275|consen  211 GQKSHVECARFSPDG-QYLVSGSVDGFIEVWNYTTGKLRKD--------------LKY----------------------  253 (508)
T ss_pred             ccccchhheeeCCCC-ceEeeccccceeeeehhccchhhhh--------------hhh----------------------
Confidence            456679999999999 9999999999999999999874321              000                      


Q ss_pred             cccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcc
Q psy17682        122 YVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGIS  201 (490)
Q Consensus       122 ~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~  201 (490)
                           .                             ....+.-|.++|.|+.|+.|. .++++|+.||.|++|.+++|.++
T Consensus       254 -----Q-----------------------------Aqd~fMMmd~aVlci~FSRDs-EMlAsGsqDGkIKvWri~tG~Cl  298 (508)
T KOG0275|consen  254 -----Q-----------------------------AQDNFMMMDDAVLCISFSRDS-EMLASGSQDGKIKVWRIETGQCL  298 (508)
T ss_pred             -----h-----------------------------hhcceeecccceEEEeecccH-HHhhccCcCCcEEEEEEecchHH
Confidence                 0                             001234578999999999987 89999999999999999999999


Q ss_pred             cccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCe
Q psy17682        202 RTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKK  281 (490)
Q Consensus       202 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  281 (490)
                      +.+..      +|...|+|+.|+.++. .+++++.|.++++.-+++|+++..+++|.+.|+...|.++|..+++++.||+
T Consensus       299 RrFdr------AHtkGvt~l~FSrD~S-qiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgt  371 (508)
T KOG0275|consen  299 RRFDR------AHTKGVTCLSFSRDNS-QILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGT  371 (508)
T ss_pred             HHhhh------hhccCeeEEEEccCcc-hhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCcc
Confidence            98764      4999999999999996 8999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeCCCCceeeeeeec-CCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc--CCCceeeeeec
Q psy17682        282 MRIINPRTGAIEEEAVCH-EGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD--TSNGVMFPLYD  357 (490)
Q Consensus       282 i~iwd~~~~~~~~~~~~~-~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~--~~~~i~~~~~s  357 (490)
                      |++|+..+.+++.+++.. ....+..+..-|. ...++++.   ..++++|.++...-  ......+  ..+...+.+.|
T Consensus       372 vkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCN---rsntv~imn~qGQv--VrsfsSGkREgGdFi~~~lS  446 (508)
T KOG0275|consen  372 VKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCN---RSNTVYIMNMQGQV--VRSFSSGKREGGDFINAILS  446 (508)
T ss_pred             EEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEc---CCCeEEEEeccceE--EeeeccCCccCCceEEEEec
Confidence            999999999999998832 3344666666654 55666666   67889998887421  1111111  22346778899


Q ss_pred             CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--eeEEEE
Q psy17682        358 PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--IGRFFR  420 (490)
Q Consensus       358 ~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~  420 (490)
                      |.|.++| +.+.|+.++.|.+.+++ +.+.+.  -+...+.+++-+|...++++-++  ..++|+
T Consensus       447 pkGewiY-cigED~vlYCF~~~sG~-LE~tl~--VhEkdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  447 PKGEWIY-CIGEDGVLYCFSVLSGK-LERTLP--VHEKDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             CCCcEEE-EEccCcEEEEEEeecCc-eeeeee--cccccccccccCcccchhhhhcccchhhhcC
Confidence            9999995 66799999999999987 333333  24457889999999888887654  445553

>KOG0266|consensus

Probab=100.00  E-value=1.9e-31  Score=259.28  Aligned_cols=252  Identities=21%  Similarity=0.342  Sum_probs=214.9

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      .....+.||...|++++|+|++ .++++|+.|++++|||+....                                    
T Consensus       194 ~~~~~l~~h~~~v~~~~fs~d~-~~l~s~s~D~tiriwd~~~~~------------------------------------  236 (456)
T KOG0266|consen  194 NLLRELSGHTRGVSDVAFSPDG-SYLLSGSDDKTLRIWDLKDDG------------------------------------  236 (456)
T ss_pred             hhhccccccccceeeeEECCCC-cEEEEecCCceEEEeeccCCC------------------------------------
Confidence            3566679999999999999999 899999999999999994321                                    


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                                                               ..++++.+|...|++++|+|++ +++++|+.|++|+|||
T Consensus       237 -----------------------------------------~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tvriWd  274 (456)
T KOG0266|consen  237 -----------------------------------------RNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDDGTVRIWD  274 (456)
T ss_pred             -----------------------------------------eEEEEecCCCCceEEEEecCCC-CEEEEecCCCcEEEEe
Confidence                                                     0233677999999999999999 9999999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe--eEEEEecCCCc--EEEEEEcCCC
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE--IMIQIECHPDI--VYSASWNWDG  270 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~--v~~~~~~~~~  270 (490)
                      ++++++.+.       +.+|.+.|++++|++++. +|++++.|+.|++||+.++.  +...+..+...  +++++|+|++
T Consensus       275 ~~~~~~~~~-------l~~hs~~is~~~f~~d~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~  346 (456)
T KOG0266|consen  275 VRTGECVRK-------LKGHSDGISGLAFSPDGN-LLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNG  346 (456)
T ss_pred             ccCCeEEEe-------eeccCCceEEEEECCCCC-EEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCC
Confidence            999877665       556999999999999995 99999999999999999998  56677666555  9999999999


Q ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeeeecCCC--ceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccC-
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGS--KATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDT-  347 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~-  347 (490)
                      .++++++.|+.+++||++.+.....+.+|...  .+.+...++.+.++++|+   .|+.|++||+.+......+.  .| 
T Consensus       347 ~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~---~d~~v~~~~~~s~~~~~~l~--~h~  421 (456)
T KOG0266|consen  347 KYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGS---EDGSVYVWDSSSGGILQRLE--GHS  421 (456)
T ss_pred             cEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEe---CCceEEEEeCCccchhhhhc--CCC
Confidence            99999999999999999999999999988875  344455678899999999   79999999999855433332  34 


Q ss_pred             CCceeeeeecCCCCeEEEEec--CCCeEEEEEec
Q psy17682        348 SNGVMFPLYDPDTNLVYLCGK--GDSVIRYFEIT  379 (490)
Q Consensus       348 ~~~i~~~~~s~~~~~l~~~g~--~dg~i~iwd~~  379 (490)
                      ...+..+.++|..+++ ++++  .|+.+++|...
T Consensus       422 ~~~~~~~~~~~~~~~~-~s~s~~~d~~~~~w~~~  454 (456)
T KOG0266|consen  422 KAAVSDLSSHPTENLI-ASSSFEGDGLIRLWKYD  454 (456)
T ss_pred             CCceeccccCCCcCee-eecCcCCCceEEEecCC
Confidence            5778999999999998 6776  78999999754

>KOG1445|consensus

Probab=100.00  E-value=4.1e-32  Score=250.08  Aligned_cols=334  Identities=31%  Similarity=0.557  Sum_probs=290.9

Q ss_pred             CCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecc
Q psy17682        134 KSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLY  213 (490)
Q Consensus       134 ~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  213 (490)
                      ..+|.+-|.++.    ..|+..+.+..+.+|.+.|+.+.|+|-.+.+|++|+.|..|+||.+..+.. ..+..|...+.+
T Consensus        52 ~~G~~lgvlPl~----~~Gr~~r~i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~-q~LSape~~~g~  126 (1012)
T KOG1445|consen   52 GEGGKLGVLPLT----AKGRRTRDIGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHS-QKLSAPEIDVGG  126 (1012)
T ss_pred             CCCceEEEEecc----ccCccccccceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcc-cccCCcceeecC
Confidence            445688899998    777777788899999999999999998778999999999999999985543 334555566666


Q ss_pred             cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-Cce
Q psy17682        214 HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRT-GAI  292 (490)
Q Consensus       214 ~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~  292 (490)
                      ..-.|.++.|+|..+.+++++. .|+++|||+.+++.+..+.+|...|.++.|+.||.+|++++.|..|+|||.+. +++
T Consensus       127 ~~~~vE~l~fHpTaDgil~s~a-~g~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPRa~~~p  205 (1012)
T KOG1445|consen  127 GNVIVECLRFHPTADGILASGA-HGSVYITDISTQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPRASMEP  205 (1012)
T ss_pred             CceEEEEeecccCcCceEEecc-CceEEEEEcccCceeecccCCchhhhccccccCCceEeeecCCcceEEeCCccCCCc
Confidence            6678899999999876777764 58999999999999999999999999999999999999999999999999986 577


Q ss_pred             eeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC
Q psy17682        293 EEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS  371 (490)
Q Consensus       293 ~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg  371 (490)
                      +++..+|.+..-..+.|.-+ .+++.+|....+.+.+++||.+....+....++....++.-..|.||.++|+++|-.+.
T Consensus       206 iQ~te~H~~~rdsRv~w~Gn~~rlisTGF~~~R~reV~~~Dtr~f~~p~~tleld~stGvLiPl~DpDt~llfLaGKG~~  285 (1012)
T KOG1445|consen  206 IQTTEGHGGMRDSRVLWAGNWERLISTGFTTKRIREVRAYDTRKFGAPVHTLELDSSTGVLIPLYDPDTRLLFLAGKGTN  285 (1012)
T ss_pred             cccccccccchhheeeeccchhhhhhcccchhhheeeeeeeccccCCcceeEEeecccceEeeeecCCCceEEEecCCcc
Confidence            88888998877788888877 56777887777789999999999998888888888889999999999999999999999


Q ss_pred             eEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecCCCceEEEEEEEeCCC-cCcccCCCCCCC
Q psy17682        372 VIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKS-ELFQDDLYPDTV  450 (490)
Q Consensus       372 ~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~p~~~-~~~~~~~~~~~~  450 (490)
                      ++..+.+...+|++.....+.......+.+.-|...+-+..++..|++.|.... +-|+.+.+|||+ .-|.+|+||++.
T Consensus       286 ~l~~lE~~d~qPyLs~v~~~tle~~~~GA~lvpkral~VM~~EV~rvlQLt~~~-ivPi~y~VPRksyrdFH~DLfPeT~  364 (1012)
T KOG1445|consen  286 KLFMLEMQDRQPYLSHVFELTLEEQTLGATLVPKRALHVMDGEVDRVLQLTKSS-IVPIPYIVPRKSYRDFHSDLFPETR  364 (1012)
T ss_pred             eEEEEEecCCCcchhhhhhhcchhhhccceecchhhhhhcchhhhhheecccCc-eeecccccchhhhhhhhhhhCcccc
Confidence            999999999988766655555555568889999999999999999999999988 999999999976 489999999999


Q ss_pred             CCCCccchhhhcCCCCCCCcccCC
Q psy17682        451 GDTAALTADEWFAGNELFQDDLYP  474 (490)
Q Consensus       451 ~~~~~~~~~~~~~~~~~~~~~~~~  474 (490)
                      +.++.+.+.+|++|.|..+..++.
T Consensus       365 G~~p~~~ageWlnG~Nq~vqKvSl  388 (1012)
T KOG1445|consen  365 GAEPGCTAGEWLNGTNQVVQKVSL  388 (1012)
T ss_pred             CCccCcCccceecCcccccccccc
Confidence            999999999999999988875554

>KOG0292|consensus

Probab=100.00  E-value=2.9e-31  Score=253.07  Aligned_cols=288  Identities=21%  Similarity=0.276  Sum_probs=237.6

Q ss_pred             ecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEe
Q psy17682         39 DLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITI  118 (490)
Q Consensus        39 ~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  118 (490)
                      .+...+.+|..++|+|.. ..++++-..|.|.+||.+=+.                                        
T Consensus         4 kfEskSsRvKglsFHP~r-PwILtslHsG~IQlWDYRM~t----------------------------------------   42 (1202)
T KOG0292|consen    4 KFESKSSRVKGLSFHPKR-PWILTSLHSGVIQLWDYRMGT----------------------------------------   42 (1202)
T ss_pred             hhhcccccccceecCCCC-CEEEEeecCceeeeehhhhhh----------------------------------------
Confidence            355667788889999988 677888888899999876432                                        


Q ss_pred             ccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC
Q psy17682        119 SEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG  198 (490)
Q Consensus       119 s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~  198 (490)
                                                            .+..+..|.++|.+++|+|++ .+++||+.|-+|++|+..+.
T Consensus        43 --------------------------------------li~rFdeHdGpVRgv~FH~~q-plFVSGGDDykIkVWnYk~r   83 (1202)
T KOG0292|consen   43 --------------------------------------LIDRFDEHDGPVRGVDFHPTQ-PLFVSGGDDYKIKVWNYKTR   83 (1202)
T ss_pred             --------------------------------------HHhhhhccCCccceeeecCCC-CeEEecCCccEEEEEecccc
Confidence                                                  222456899999999999988 89999999999999999998


Q ss_pred             CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC
Q psy17682        199 GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK  278 (490)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  278 (490)
                      +++.+       +.+|-+.|..+.|++.-+ .+++++.|-+|+||+..+++++..+.+|...|.|..|+|....++++|-
T Consensus        84 rclft-------L~GHlDYVRt~~FHheyP-WIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSL  155 (1202)
T KOG0292|consen   84 RCLFT-------LLGHLDYVRTVFFHHEYP-WILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASL  155 (1202)
T ss_pred             eehhh-------hccccceeEEeeccCCCc-eEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecc
Confidence            88765       567999999999999986 9999999999999999999999999999999999999999999999999


Q ss_pred             CCeEEEEeCCCCc-----------------------------eeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEE
Q psy17682        279 DKKMRIINPRTGA-----------------------------IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYS  329 (490)
Q Consensus       279 dg~i~iwd~~~~~-----------------------------~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~  329 (490)
                      |.+||+||+..-+                             ....+.+|... +.-++|+|.-.++++|+   .|+.|+
T Consensus       156 DQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRG-VNwaAfhpTlpliVSG~---DDRqVK  231 (1202)
T KOG0292|consen  156 DQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRG-VNWAAFHPTLPLIVSGA---DDRQVK  231 (1202)
T ss_pred             cceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccc-cceEEecCCcceEEecC---Ccceee
Confidence            9999999985211                             11223466665 88899999999999998   589999


Q ss_pred             EecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCcee
Q psy17682        330 LRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGC  408 (490)
Q Consensus       330 iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~  408 (490)
                      +|.+...+.-..-...+|.+.|.++.|+|..+.+ ++.+.|+.|+|||+...+.    +..+. ..+..+.++-+|...+
T Consensus       232 lWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lI-lSnsEDksirVwDm~kRt~----v~tfrrendRFW~laahP~lNL  306 (1202)
T KOG0292|consen  232 LWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLI-LSNSEDKSIRVWDMTKRTS----VQTFRRENDRFWILAAHPELNL  306 (1202)
T ss_pred             EEEeccccceeehhhhcccCCcceEEecCcccee-EecCCCccEEEEecccccc----eeeeeccCCeEEEEEecCCcce
Confidence            9998864432222334688889999999998888 7899999999999998763    33333 3357889999999988


Q ss_pred             EEee-cceeEEEEecC
Q psy17682        409 DVNS-CEIGRFFRLNN  423 (490)
Q Consensus       409 l~~~-~~~~~~~~~~~  423 (490)
                      ++++ ++-+-+|+++.
T Consensus       307 fAAgHDsGm~VFkleR  322 (1202)
T KOG0292|consen  307 FAAGHDSGMIVFKLER  322 (1202)
T ss_pred             eeeecCCceEEEEEcc
Confidence            8887 55556777763

>KOG0313|consensus

Probab=100.00  E-value=9.2e-31  Score=227.48  Aligned_cols=303  Identities=18%  Similarity=0.276  Sum_probs=240.0

Q ss_pred             eeeeeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecc
Q psy17682         22 LFRLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKV  101 (490)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (490)
                      .+.+.|.-.-..++|+.. .-|.+.|.+|.-.+   ..++||+.||.+++||.+...                       
T Consensus        84 ~leIEYv~~~~aP~pl~~-~~hdDWVSsv~~~~---~~IltgsYDg~~riWd~~Gk~-----------------------  136 (423)
T KOG0313|consen   84 ILEIEYVEAITAPKPLQC-FLHDDWVSSVKGAS---KWILTGSYDGTSRIWDLKGKS-----------------------  136 (423)
T ss_pred             eeEEEEEEecCCCCcccc-ccchhhhhhhcccC---ceEEEeecCCeeEEEecCCce-----------------------
Confidence            445666655555555444 35999999998873   779999999999999987632                       


Q ss_pred             cCCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCC--CC
Q psy17682        102 GGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHD--DN  179 (490)
Q Consensus       102 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~--~~  179 (490)
                                                                              ..++.||.++|.+++|.-.+  ..
T Consensus       137 --------------------------------------------------------~~~~~Ght~~ik~v~~v~~n~~~~  160 (423)
T KOG0313|consen  137 --------------------------------------------------------IKTIVGHTGPIKSVAWVIKNSSSC  160 (423)
T ss_pred             --------------------------------------------------------EEEEecCCcceeeeEEEecCCccc
Confidence                                                                    12456999999988885433  13


Q ss_pred             EEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC-------------
Q psy17682        180 VIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG-------------  246 (490)
Q Consensus       180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~-------------  246 (490)
                      .|++++.|.++++|..+.+.......   ....||...|-++...+++. .+++|+.|.+|.||+..             
T Consensus       161 ~fvsas~Dqtl~Lw~~~~~~~~~~~~---~~~~GHk~~V~sVsv~~sgt-r~~SgS~D~~lkiWs~~~~~~~~~E~~s~~  236 (423)
T KOG0313|consen  161 LFVSASMDQTLRLWKWNVGENKVKAL---KVCRGHKRSVDSVSVDSSGT-RFCSGSWDTMLKIWSVETDEEDELESSSNR  236 (423)
T ss_pred             eEEEecCCceEEEEEecCchhhhhHH---hHhcccccceeEEEecCCCC-eEEeecccceeeecccCCCccccccccchh
Confidence            69999999999999998776543322   22348999999999999995 99999999999999932             


Q ss_pred             ------------CCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc
Q psy17682        247 ------------TGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL  314 (490)
Q Consensus       247 ------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~  314 (490)
                                  ++.++..+.+|..+|.++.|++ ...+.+++.|.+|+.||+.++..+.++....  .+.++.++|...
T Consensus       237 rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~k--sl~~i~~~~~~~  313 (423)
T KOG0313|consen  237 RRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTTNK--SLNCISYSPLSK  313 (423)
T ss_pred             hhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeecCc--ceeEeecccccc
Confidence                        1236677889999999999997 6789999999999999999999988887554  389999999999


Q ss_pred             EEEEEeCCCceeEEEEecCCCCCCCeEE-EeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeC
Q psy17682        315 IFTTGFSKMSERQYSLRAPDHLDEPIVM-VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQT  393 (490)
Q Consensus       315 ~l~~~~~~~~~~~i~iwd~~~~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~  393 (490)
                      +|++|+   .|..+++||.+++...... ...+|.+-|.++.|+|...+++++|+.|+++++||+++.+..+..+  ..|
T Consensus       314 Ll~~gs---sdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI--~~h  388 (423)
T KOG0313|consen  314 LLASGS---SDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDI--AGH  388 (423)
T ss_pred             eeeecC---CCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceee--ccC
Confidence            999998   7999999999987654433 3457778899999999999999999999999999999987333233  245


Q ss_pred             CCceeeEEEeeCceeEEeec--ceeEEEE
Q psy17682        394 PDPQRGIGMMPKRGCDVNSC--EIGRFFR  420 (490)
Q Consensus       394 ~~~i~~~~~sp~~~~l~~~~--~~~~~~~  420 (490)
                      .+.|.++.|...+ ++++|+  ..+++++
T Consensus       389 ~DKvl~vdW~~~~-~IvSGGaD~~l~i~~  416 (423)
T KOG0313|consen  389 NDKVLSVDWNEGG-LIVSGGADNKLRIFK  416 (423)
T ss_pred             CceEEEEeccCCc-eEEeccCcceEEEec
Confidence            6789999998764 456553  3555554

>KOG0292|consensus

Probab=100.00  E-value=6.2e-31  Score=250.90  Aligned_cols=316  Identities=17%  Similarity=0.222  Sum_probs=247.1

Q ss_pred             CCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682         33 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST  112 (490)
Q Consensus        33 ~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (490)
                      +...+..+.+|.++|..|+|+|++ .+++|||+|-.|++|+.++....                 ...      .++...
T Consensus        40 M~tli~rFdeHdGpVRgv~FH~~q-plFVSGGDDykIkVWnYk~rrcl-----------------ftL------~GHlDY   95 (1202)
T KOG0292|consen   40 MGTLIDRFDEHDGPVRGVDFHPTQ-PLFVSGGDDYKIKVWNYKTRRCL-----------------FTL------LGHLDY   95 (1202)
T ss_pred             hhhHHhhhhccCCccceeeecCCC-CeEEecCCccEEEEEecccceeh-----------------hhh------ccccce
Confidence            445667799999999999999999 89999999999999999986521                 111      224557


Q ss_pred             CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEE
Q psy17682        113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKV  192 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~i  192 (490)
                      |+.+.|++.+     -.|.+++.|.+|+||+..        ..+++.++.||...|.|.+|+|.. .+++|+|-|.+||+
T Consensus        96 VRt~~FHhey-----PWIlSASDDQTIrIWNwq--------sr~~iavltGHnHYVMcAqFhptE-DlIVSaSLDQTVRV  161 (1202)
T KOG0292|consen   96 VRTVFFHHEY-----PWILSASDDQTIRIWNWQ--------SRKCIAVLTGHNHYVMCAQFHPTE-DLIVSASLDQTVRV  161 (1202)
T ss_pred             eEEeeccCCC-----ceEEEccCCCeEEEEecc--------CCceEEEEecCceEEEeeccCCcc-ceEEEecccceEEE
Confidence            8889998886     578889999999999986        455888999999999999999976 79999999999999


Q ss_pred             EECCCCCcccc------------------cc----cceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe-
Q psy17682        193 WQIPDGGISRT------------------LT----EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE-  249 (490)
Q Consensus       193 wd~~~~~~~~~------------------~~----~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~-  249 (490)
                      ||+..-+....                  +.    .-...+.||...|+-++|+|.-+ ++++|+.|..|++|.+...+ 
T Consensus       162 WDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlp-liVSG~DDRqVKlWrmnetKa  240 (1202)
T KOG0292|consen  162 WDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLP-LIVSGADDRQVKLWRMNETKA  240 (1202)
T ss_pred             EeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcc-eEEecCCcceeeEEEeccccc
Confidence            99853211100                  00    11235688999999999999986 99999999999999997655 


Q ss_pred             -eEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEE
Q psy17682        250 -IMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQY  328 (490)
Q Consensus       250 -~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i  328 (490)
                       .+.+..+|.+.|.++-|+|...++++.+.|++|++||+...+.+++++...+ +...++.+|..+++++|-    |+-+
T Consensus       241 WEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrend-RFW~laahP~lNLfAAgH----DsGm  315 (1202)
T KOG0292|consen  241 WEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRREND-RFWILAAHPELNLFAAGH----DSGM  315 (1202)
T ss_pred             eeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccCC-eEEEEEecCCcceeeeec----CCce
Confidence             4456779999999999999999999999999999999999999999975444 599999999999999995    6667


Q ss_pred             EEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC----CceeeEEEee
Q psy17682        329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP----DPQRGIGMMP  404 (490)
Q Consensus       329 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~----~~i~~~~~sp  404 (490)
                      .+|.+....            +..++    +++.|+..  .|..|+-+|+.+.+..  .+..+.++    .+.+++.++|
T Consensus       316 ~VFkleREr------------pa~~v----~~n~LfYv--kd~~i~~~d~~t~~d~--~v~~lr~~g~~~~~~~smsYNp  375 (1202)
T KOG0292|consen  316 IVFKLERER------------PAYAV----NGNGLFYV--KDRFIRSYDLRTQKDT--AVASLRRPGTLWQPPRSLSYNP  375 (1202)
T ss_pred             EEEEEcccC------------ceEEE----cCCEEEEE--ccceEEeeeccccccc--eeEeccCCCcccCCcceeeecc
Confidence            777665422            11111    23444443  3899999999985532  22222322    5788999999


Q ss_pred             Cc-eeEEee
Q psy17682        405 KR-GCDVNS  412 (490)
Q Consensus       405 ~~-~~l~~~  412 (490)
                      .. ..++++
T Consensus       376 ae~~vlics  384 (1202)
T KOG0292|consen  376 AENAVLICS  384 (1202)
T ss_pred             ccCeEEEEe
Confidence            64 455554

>KOG0645|consensus

Probab=100.00  E-value=2.5e-30  Score=215.21  Aligned_cols=282  Identities=20%  Similarity=0.278  Sum_probs=223.6

Q ss_pred             cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCccee-ecccCCeeEEEECCCCCCEEEEEeCCCcE
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALV-GGHKGPVLDIAWSPHDDNVIASGSEDCVV  190 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~~~dg~i  190 (490)
                      .+..++|+|..    -.++++++.+..|++|...    . ++...+..++ .+|+..|.+++|+|.| ++|++|+-|.++
T Consensus        16 r~W~~awhp~~----g~ilAscg~Dk~vriw~~~----~-~~s~~ck~vld~~hkrsVRsvAwsp~g-~~La~aSFD~t~   85 (312)
T KOG0645|consen   16 RVWSVAWHPGK----GVILASCGTDKAVRIWSTS----S-GDSWTCKTVLDDGHKRSVRSVAWSPHG-RYLASASFDATV   85 (312)
T ss_pred             cEEEEEeccCC----ceEEEeecCCceEEEEecC----C-CCcEEEEEeccccchheeeeeeecCCC-cEEEEeeccceE
Confidence            57889999872    1378899999999999986    2 3333333344 5899999999999999 899999999999


Q ss_pred             EEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC---eeEEEEecCCCcEEEEEEc
Q psy17682        191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG---EIMIQIECHPDIVYSASWN  267 (490)
Q Consensus       191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~  267 (490)
                      .||.-..+..     .....+.||...|.|++|+++|. +||+++.|..|-||.+..+   +++..++.|...|..+.|+
T Consensus        86 ~Iw~k~~~ef-----ecv~~lEGHEnEVK~Vaws~sG~-~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WH  159 (312)
T KOG0645|consen   86 VIWKKEDGEF-----ECVATLEGHENEVKCVAWSASGN-YLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWH  159 (312)
T ss_pred             EEeecCCCce-----eEEeeeeccccceeEEEEcCCCC-EEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEc
Confidence            9998654433     23556889999999999999995 9999999999999998754   4677788999999999999


Q ss_pred             CCCCEEEEEeCCCeEEEEeCC---CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe
Q psy17682        268 WDGSKLLTTCKDKKMRIINPR---TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE  344 (490)
Q Consensus       268 ~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~  344 (490)
                      |...+|++++.|++|++|+-.   ...+.+++.+|.+. +.+++|++.|..|++++   .|++++||.....      ..
T Consensus       160 Pt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~T-VW~~~F~~~G~rl~s~s---dD~tv~Iw~~~~~------~~  229 (312)
T KOG0645|consen  160 PTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENT-VWSLAFDNIGSRLVSCS---DDGTVSIWRLYTD------LS  229 (312)
T ss_pred             CCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccce-EEEEEecCCCceEEEec---CCcceEeeeeccC------cc
Confidence            999999999999999999876   34678889998875 99999999999999998   6899999986632      12


Q ss_pred             ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC--CCeeEEee--eeeCCCceeeEEEeeC-ceeEEee--cceeE
Q psy17682        345 LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE--PPFVHYIN--TFQTPDPQRGIGMMPK-RGCDVNS--CEIGR  417 (490)
Q Consensus       345 ~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~--~~~~~~~~--~~~~~~~i~~~~~sp~-~~~l~~~--~~~~~  417 (490)
                      ..|...+..+.|. +| .| ++++.|+.|++|.-...  +|..+.+.  ...|...|++++|+|. ...|+++  ++.++
T Consensus       230 ~~~sr~~Y~v~W~-~~-~I-aS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~  306 (312)
T KOG0645|consen  230 GMHSRALYDVPWD-NG-VI-ASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVN  306 (312)
T ss_pred             hhcccceEeeeec-cc-ce-EeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEE
Confidence            2345678889998 33 44 89999999999988753  22222222  1235568999999995 3455555  44888


Q ss_pred             EEEec
Q psy17682        418 FFRLN  422 (490)
Q Consensus       418 ~~~~~  422 (490)
                      +|.+.
T Consensus       307 ~W~l~  311 (312)
T KOG0645|consen  307 FWELE  311 (312)
T ss_pred             EEEec
Confidence            99875

>KOG0276|consensus

Probab=100.00  E-value=1e-30  Score=240.66  Aligned_cols=294  Identities=15%  Similarity=0.168  Sum_probs=239.3

Q ss_pred             EecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeE
Q psy17682         38 VDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEIT  117 (490)
Q Consensus        38 ~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  117 (490)
                      ..+..|+++|.+|.|+|.. ..++++-..|.|.||+.++.....+..                  .     .+..|++..
T Consensus         7 rk~~~rSdRVKsVd~HPte-Pw~la~LynG~V~IWnyetqtmVksfe------------------V-----~~~PvRa~k   62 (794)
T KOG0276|consen    7 RKFQSRSDRVKSVDFHPTE-PWILAALYNGDVQIWNYETQTMVKSFE------------------V-----SEVPVRAAK   62 (794)
T ss_pred             hHhhccCCceeeeecCCCC-ceEEEeeecCeeEEEecccceeeeeee------------------e-----cccchhhhe
Confidence            3466699999999999999 677778888999999998754322100                  0     111344444


Q ss_pred             eccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCC
Q psy17682        118 ISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPD  197 (490)
Q Consensus       118 ~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~  197 (490)
                      |-..     ...+++++.|..|+||+.+        ....+..+..|.+-|.|++.+|.. .+++|++.|-+|++||.+.
T Consensus        63 fiaR-----knWiv~GsDD~~IrVfnyn--------t~ekV~~FeAH~DyIR~iavHPt~-P~vLtsSDDm~iKlW~we~  128 (794)
T KOG0276|consen   63 FIAR-----KNWIVTGSDDMQIRVFNYN--------TGEKVKTFEAHSDYIRSIAVHPTL-PYVLTSSDDMTIKLWDWEN  128 (794)
T ss_pred             eeec-----cceEEEecCCceEEEEecc--------cceeeEEeeccccceeeeeecCCC-CeEEecCCccEEEEeeccC
Confidence            4433     2578889999999999986        334677899999999999999987 7999999999999999875


Q ss_pred             CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC--CEEEE
Q psy17682        198 GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG--SKLLT  275 (490)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~  275 (490)
                      +=      ...+.+.+|...|.+++|+|...+.+++++-|++|+||.+.+..+..++++|...|+|+.+-+-|  .+|++
T Consensus       129 ~w------a~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIs  202 (794)
T KOG0276|consen  129 EW------ACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLIS  202 (794)
T ss_pred             ce------eeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEe
Confidence            42      12334778999999999999998999999999999999999999999999999999999998844  69999


Q ss_pred             EeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeee
Q psy17682        276 TCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPL  355 (490)
Q Consensus       276 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~  355 (490)
                      |+.|.+++|||..+..+++++.+|... +..+.|+|.=.++++|+   .||+++||+..+.+....+.  -....+++++
T Consensus       203 gaDD~tiKvWDyQtk~CV~TLeGHt~N-vs~v~fhp~lpiiisgs---EDGTvriWhs~Ty~lE~tLn--~gleRvW~I~  276 (794)
T KOG0276|consen  203 GADDLTIKVWDYQTKSCVQTLEGHTNN-VSFVFFHPELPIIISGS---EDGTVRIWNSKTYKLEKTLN--YGLERVWCIA  276 (794)
T ss_pred             cCCCceEEEeecchHHHHHHhhccccc-ceEEEecCCCcEEEEec---CCccEEEecCcceehhhhhh--cCCceEEEEe
Confidence            999999999999999999999999987 99999999999999999   79999999988765433322  1235799999


Q ss_pred             ecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682        356 YDPDTNLVYLCGKGDSVIRYFEITAEPP  383 (490)
Q Consensus       356 ~s~~~~~l~~~g~~dg~i~iwd~~~~~~  383 (490)
                      -.+.++.+ +.|...|.| +..+..+.|
T Consensus       277 ~~k~~~~i-~vG~Deg~i-~v~lgreeP  302 (794)
T KOG0276|consen  277 AHKGDGKI-AVGFDEGSV-TVKLGREEP  302 (794)
T ss_pred             ecCCCCeE-EEeccCCcE-EEEccCCCC
Confidence            88888887 778766655 445555543

>KOG0285|consensus

Probab=100.00  E-value=2.9e-31  Score=228.77  Aligned_cols=255  Identities=18%  Similarity=0.210  Sum_probs=216.6

Q ss_pred             CCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEE
Q psy17682        155 NADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTA  234 (490)
Q Consensus       155 ~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~  234 (490)
                      ++..+++.+|.+.|.|+++.|-+ .+|++|+.|++|+|||+.++++..+       +.+|...|..+++++..+ +++++
T Consensus       141 wKl~rVi~gHlgWVr~vavdP~n-~wf~tgs~DrtikIwDlatg~Lklt-------ltGhi~~vr~vavS~rHp-YlFs~  211 (460)
T KOG0285|consen  141 WKLYRVISGHLGWVRSVAVDPGN-EWFATGSADRTIKIWDLATGQLKLT-------LTGHIETVRGVAVSKRHP-YLFSA  211 (460)
T ss_pred             ceehhhhhhccceEEEEeeCCCc-eeEEecCCCceeEEEEcccCeEEEe-------ecchhheeeeeeecccCc-eEEEe
Confidence            45677889999999999999976 8999999999999999999987655       567999999999999986 99999


Q ss_pred             eCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc
Q psy17682        235 GSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL  314 (490)
Q Consensus       235 ~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~  314 (490)
                      +.|+.|+.||++..+.++.+.+|-+.|.+++.+|.-..|++|+.|.++++||+|+...+..+.+|... +..+.+.|..-
T Consensus       212 gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~-V~~V~~~~~dp  290 (460)
T KOG0285|consen  212 GEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNP-VASVMCQPTDP  290 (460)
T ss_pred             cCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCc-ceeEEeecCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999986 88999988777


Q ss_pred             EEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC
Q psy17682        315 IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP  394 (490)
Q Consensus       315 ~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~  394 (490)
                      .+++|+   .|++|++||++.++..  ....+|...+.+++.+|....+ ++++.|. |+-|++..+. +...+.  .+.
T Consensus       291 qvit~S---~D~tvrlWDl~agkt~--~tlt~hkksvral~lhP~e~~f-ASas~dn-ik~w~~p~g~-f~~nls--gh~  360 (460)
T KOG0285|consen  291 QVITGS---HDSTVRLWDLRAGKTM--ITLTHHKKSVRALCLHPKENLF-ASASPDN-IKQWKLPEGE-FLQNLS--GHN  360 (460)
T ss_pred             ceEEec---CCceEEEeeeccCcee--EeeecccceeeEEecCCchhhh-hccCCcc-ceeccCCccc-hhhccc--ccc
Confidence            788888   7999999999987643  3334677789999999987665 7887765 8999999987 222222  344


Q ss_pred             CceeeEEEeeCceeEEeecc-eeEEEEecCCCceEE
Q psy17682        395 DPQRGIGMMPKRGCDVNSCE-IGRFFRLNNSGLCQV  429 (490)
Q Consensus       395 ~~i~~~~~sp~~~~l~~~~~-~~~~~~~~~~~~~~~  429 (490)
                      ..|+.++...|+.++..++. .+.+|+..++.-.+.
T Consensus       361 ~iintl~~nsD~v~~~G~dng~~~fwdwksg~nyQ~  396 (460)
T KOG0285|consen  361 AIINTLSVNSDGVLVSGGDNGSIMFWDWKSGHNYQR  396 (460)
T ss_pred             ceeeeeeeccCceEEEcCCceEEEEEecCcCccccc
Confidence            57899999999877555533 667888877663333

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=1.3e-29  Score=264.76  Aligned_cols=293  Identities=12%  Similarity=0.157  Sum_probs=222.8

Q ss_pred             ccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC
Q psy17682        109 RNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC  188 (490)
Q Consensus       109 ~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg  188 (490)
                      ....|.+++|+|+.     ..+++++.++.|++|+.................+ .+...|.+++|+|..+.+|++++.||
T Consensus       482 ~~~~V~~i~fs~dg-----~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~~las~~~Dg  555 (793)
T PLN00181        482 SSNLVCAIGFDRDG-----EFFATAGVNKKIKIFECESIIKDGRDIHYPVVEL-ASRSKLSGICWNSYIKSQVASSNFEG  555 (793)
T ss_pred             CCCcEEEEEECCCC-----CEEEEEeCCCEEEEEECCcccccccccccceEEe-cccCceeeEEeccCCCCEEEEEeCCC
Confidence            45578999999985     4688899999999999752111111111112223 34568999999986558999999999


Q ss_pred             cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEc-
Q psy17682        189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWN-  267 (490)
Q Consensus       189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~-  267 (490)
                      +|++||+.+++.+..       +.+|...|++++|+|....+|++|+.|+.|++||+++++.+..+.. ...+.++.|+ 
T Consensus       556 ~v~lWd~~~~~~~~~-------~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~-~~~v~~v~~~~  627 (793)
T PLN00181        556 VVQVWDVARSQLVTE-------MKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANICCVQFPS  627 (793)
T ss_pred             eEEEEECCCCeEEEE-------ecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEec-CCCeEEEEEeC
Confidence            999999988765544       4569999999999974335999999999999999999998888874 4679999995 


Q ss_pred             CCCCEEEEEeCCCeEEEEeCCCCc-eeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC----CeEE
Q psy17682        268 WDGSKLLTTCKDKKMRIINPRTGA-IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE----PIVM  342 (490)
Q Consensus       268 ~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~----~~~~  342 (490)
                      +++.+|++|+.||.|++||+++.+ ....+.+|... +..+.|. ++.++++++   .|+.|++||++....    ....
T Consensus       628 ~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~-V~~v~f~-~~~~lvs~s---~D~~ikiWd~~~~~~~~~~~~l~  702 (793)
T PLN00181        628 ESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKT-VSYVRFV-DSSTLVSSS---TDNTLKLWDLSMSISGINETPLH  702 (793)
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCC-EEEEEEe-CCCEEEEEE---CCCEEEEEeCCCCccccCCcceE
Confidence            478999999999999999998865 45667777765 8999997 667788887   689999999975321    1111


Q ss_pred             EeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEe----------eeeeCCCceeeEEEeeCceeEEee
Q psy17682        343 VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI----------NTFQTPDPQRGIGMMPKRGCDVNS  412 (490)
Q Consensus       343 ~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~----------~~~~~~~~i~~~~~sp~~~~l~~~  412 (490)
                      ...+|...+..++|+|++++| ++|+.|+.|++|+.....+.....          ....+...|.+++|+|++..++++
T Consensus       703 ~~~gh~~~i~~v~~s~~~~~l-asgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~  781 (793)
T PLN00181        703 SFMGHTNVKNFVGLSVSDGYI-ATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAA  781 (793)
T ss_pred             EEcCCCCCeeEEEEcCCCCEE-EEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEe
Confidence            223566678899999999988 899999999999987665332111          011223569999999999988887


Q ss_pred             c--ceeEEEEe
Q psy17682        413 C--EIGRFFRL  421 (490)
Q Consensus       413 ~--~~~~~~~~  421 (490)
                      +  +.+++|++
T Consensus       782 ~~dG~I~i~~~  792 (793)
T PLN00181        782 NSTGNIKILEM  792 (793)
T ss_pred             cCCCcEEEEec
Confidence            5  47778875

>KOG0281|consensus

Probab=100.00  E-value=6.8e-32  Score=231.81  Aligned_cols=279  Identities=14%  Similarity=0.185  Sum_probs=226.3

Q ss_pred             ccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccc
Q psy17682         43 HQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDY  122 (490)
Q Consensus        43 H~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  122 (490)
                      -.+.|.|+.+..   ..++||..|++|+|||.++-....                 ...++      ...|.++.+... 
T Consensus       196 ~skgVYClQYDD---~kiVSGlrDnTikiWD~n~~~c~~-----------------~L~GH------tGSVLCLqyd~r-  248 (499)
T KOG0281|consen  196 NSKGVYCLQYDD---EKIVSGLRDNTIKIWDKNSLECLK-----------------ILTGH------TGSVLCLQYDER-  248 (499)
T ss_pred             cCCceEEEEecc---hhhhcccccCceEEeccccHHHHH-----------------hhhcC------CCcEEeeeccce-
Confidence            456799998864   569999999999999998744211                 11122      224666666544 


Q ss_pred             ccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccc
Q psy17682        123 VKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISR  202 (490)
Q Consensus       123 ~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~  202 (490)
                            ++.++++|.+++||+.+     ++   +.+.++-+|...|..+.|+.   .++++++.|.+|.+||+.....+.
T Consensus       249 ------viisGSSDsTvrvWDv~-----tg---e~l~tlihHceaVLhlrf~n---g~mvtcSkDrsiaVWdm~sps~it  311 (499)
T KOG0281|consen  249 ------VIVSGSSDSTVRVWDVN-----TG---EPLNTLIHHCEAVLHLRFSN---GYMVTCSKDRSIAVWDMASPTDIT  311 (499)
T ss_pred             ------EEEecCCCceEEEEecc-----CC---chhhHHhhhcceeEEEEEeC---CEEEEecCCceeEEEeccCchHHH
Confidence                  79999999999999995     33   35668889999999999983   699999999999999997665332


Q ss_pred             ccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeE
Q psy17682        203 TLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM  282 (490)
Q Consensus       203 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  282 (490)
                      ..    ..+.||...|..+.|+.   .++++++.|.+|++|++.+++.+.++.+|...|-|+.+.  ++++++|+.|.+|
T Consensus       312 ~r----rVLvGHrAaVNvVdfd~---kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQYr--~rlvVSGSSDntI  382 (499)
T KOG0281|consen  312 LR----RVLVGHRAAVNVVDFDD---KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTI  382 (499)
T ss_pred             HH----HHHhhhhhheeeecccc---ceEEEecCCceEEEEeccceeeehhhhcccccceehhcc--CeEEEecCCCceE
Confidence            21    23678999999999974   489999999999999999999999999999999999885  8999999999999


Q ss_pred             EEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE-------EeccCCCceeeee
Q psy17682        283 RIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM-------VELDTSNGVMFPL  355 (490)
Q Consensus       283 ~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~-------~~~~~~~~i~~~~  355 (490)
                      ++||+..|.+++.+.+|..- +.++.|  +.+.+++|.   .||.|++||+.....+...       ....|.+.|..+.
T Consensus       383 Rlwdi~~G~cLRvLeGHEeL-vRciRF--d~krIVSGa---YDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQ  456 (499)
T KOG0281|consen  383 RLWDIECGACLRVLEGHEEL-VRCIRF--DNKRIVSGA---YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQ  456 (499)
T ss_pred             EEEeccccHHHHHHhchHHh-hhheee--cCceeeecc---ccceEEEEecccccCCcccccchHHHhhhhccceeEEEe
Confidence            99999999999999999886 888988  466788887   7999999999887665322       2235667799998


Q ss_pred             ecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682        356 YDPDTNLVYLCGKGDSVIRYFEITAEPP  383 (490)
Q Consensus       356 ~s~~~~~l~~~g~~dg~i~iwd~~~~~~  383 (490)
                      |.  ...+ ++++.|.+|.|||..++.+
T Consensus       457 FD--~fqI-vsssHddtILiWdFl~~~~  481 (499)
T KOG0281|consen  457 FD--EFQI-ISSSHDDTILIWDFLNGPP  481 (499)
T ss_pred             ec--ceEE-EeccCCCeEEEEEcCCCCc
Confidence            85  3445 6788999999999998753

>KOG0265|consensus

Probab=100.00  E-value=1.6e-30  Score=219.43  Aligned_cols=265  Identities=15%  Similarity=0.184  Sum_probs=211.1

Q ss_pred             CCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEE
Q psy17682        154 INADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLT  233 (490)
Q Consensus       154 ~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s  233 (490)
                      +...+..+.||++.|+.+.|+|+| .+|+||+.|..|.+|++... +     +....+.+|.+.|..+.|.+++. .+++
T Consensus        36 l~ap~m~l~gh~geI~~~~F~P~g-s~~aSgG~Dr~I~LWnv~gd-c-----eN~~~lkgHsgAVM~l~~~~d~s-~i~S  107 (338)
T KOG0265|consen   36 LQAPIMLLPGHKGEIYTIKFHPDG-SCFASGGSDRAIVLWNVYGD-C-----ENFWVLKGHSGAVMELHGMRDGS-HILS  107 (338)
T ss_pred             ccchhhhcCCCcceEEEEEECCCC-CeEeecCCcceEEEEecccc-c-----cceeeeccccceeEeeeeccCCC-EEEE
Confidence            344566778999999999999988 89999999999999995432 2     11223668999999999999995 9999


Q ss_pred             EeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC
Q psy17682        234 AGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG-SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS  312 (490)
Q Consensus       234 ~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~  312 (490)
                      ++.|.+|+.||+++|+.+..+++|..-|+.+.-+.-| .++.+++.|+++++||+|+...++++....  .++++.|..+
T Consensus       108 ~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~ky--qltAv~f~d~  185 (338)
T KOG0265|consen  108 CGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKY--QLTAVGFKDT  185 (338)
T ss_pred             ecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccce--eEEEEEeccc
Confidence            9999999999999999999999999999999855444 467788899999999999999988886433  4999999999


Q ss_pred             CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee
Q psy17682        313 GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ  392 (490)
Q Consensus       313 ~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~  392 (490)
                      +..+.+|.   -|+.|++||++......  ...+|...|+.+..+|+|.++ .+-+.|.++++||++.--+-.+.+..+.
T Consensus       186 s~qv~sgg---Idn~ikvWd~r~~d~~~--~lsGh~DtIt~lsls~~gs~l-lsnsMd~tvrvwd~rp~~p~~R~v~if~  259 (338)
T KOG0265|consen  186 SDQVISGG---IDNDIKVWDLRKNDGLY--TLSGHADTITGLSLSRYGSFL-LSNSMDNTVRVWDVRPFAPSQRCVKIFQ  259 (338)
T ss_pred             ccceeecc---ccCceeeeccccCcceE--EeecccCceeeEEeccCCCcc-ccccccceEEEEEecccCCCCceEEEee
Confidence            98888887   79999999999766533  334788899999999999999 7899999999999987544334444443


Q ss_pred             CC-----CceeeEEEeeCceeEEeecc--eeEEEEecCCCceEEEEEEEeCCC
Q psy17682        393 TP-----DPQRGIGMMPKRGCDVNSCE--IGRFFRLNNSGLCQVVSMTVPRKS  438 (490)
Q Consensus       393 ~~-----~~i~~~~~sp~~~~l~~~~~--~~~~~~~~~~~~~~~i~~~~p~~~  438 (490)
                      ++     ......+|+|++..+.++..  .+.+|+....    .+-+..|.-.
T Consensus       260 g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r----~~lyklpGh~  308 (338)
T KOG0265|consen  260 GHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSR----RILYKLPGHY  308 (338)
T ss_pred             cchhhhhhhcceeeccCCCCccccccccceEEEeecccc----cEEEEcCCcc
Confidence            22     34577899999988777644  5555555443    3445556643

>KOG0306|consensus

Probab=100.00  E-value=7.2e-30  Score=239.82  Aligned_cols=339  Identities=12%  Similarity=0.210  Sum_probs=269.8

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      .+..++.||...|+++.|...| ..|+|||.|+.|.+||+-...                 .....-+      ++..++
T Consensus        98 ~~~~tfngHK~AVt~l~fd~~G-~rlaSGskDt~IIvwDlV~E~-----------------Gl~rL~G------Hkd~iT  153 (888)
T KOG0306|consen   98 EILITFNGHKAAVTTLKFDKIG-TRLASGSKDTDIIVWDLVGEE-----------------GLFRLRG------HKDSIT  153 (888)
T ss_pred             ceeeeecccccceEEEEEcccC-ceEeecCCCccEEEEEeccce-----------------eeEEeec------chHHHh
Confidence            7888999999999999999999 999999999999999987643                 1111112      223344


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                      ..-|..+     ...+.+.+.|+.+++|+++        ...+..+...|++.|+++++.+   +.+++++.|+.+++|+
T Consensus       154 ~~~F~~~-----~~~lvS~sKDs~iK~WdL~--------tqhCf~Thvd~r~Eiw~l~~~~---~~lvt~~~dse~~v~~  217 (888)
T KOG0306|consen  154 QALFLNG-----DSFLVSVSKDSMIKFWDLE--------TQHCFETHVDHRGEIWALVLDE---KLLVTAGTDSELKVWE  217 (888)
T ss_pred             HHhccCC-----CeEEEEeccCceEEEEecc--------cceeeeEEecccceEEEEEEec---ceEEEEecCCceEEEE
Confidence            4555442     2578889999999999996        3446677789999999999996   6899999999999999


Q ss_pred             CCCC------------------------Ccccc--------------------cc-------------------------
Q psy17682        195 IPDG------------------------GISRT--------------------LT-------------------------  205 (490)
Q Consensus       195 ~~~~------------------------~~~~~--------------------~~-------------------------  205 (490)
                      +...                        +.+..                    +.                         
T Consensus       218 L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~  297 (888)
T KOG0306|consen  218 LAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETE  297 (888)
T ss_pred             eecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhcccc
Confidence            8200                        00000                    00                         


Q ss_pred             ---------------------------------------------------------cc---------eeeecccccCEE
Q psy17682        206 ---------------------------------------------------------EP---------VVDLLYHQRRVG  219 (490)
Q Consensus       206 ---------------------------------------------------------~~---------~~~~~~~~~~v~  219 (490)
                                                                               .+         ...+.+|...|.
T Consensus       298 e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVR  377 (888)
T KOG0306|consen  298 ENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVR  377 (888)
T ss_pred             ccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhhee
Confidence                                                                     00         134567899999


Q ss_pred             EEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeec
Q psy17682        220 LVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCH  299 (490)
Q Consensus       220 ~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  299 (490)
                      +++++.+.. .+++| ..+.+++|+..+.++++++..  +.+.+..|-|.++++++|...|.+.+||+.+...+.++..|
T Consensus       378 sl~vS~d~~-~~~Sg-a~~SikiWn~~t~kciRTi~~--~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AH  453 (888)
T KOG0306|consen  378 SLCVSSDSI-LLASG-AGESIKIWNRDTLKCIRTITC--GYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAH  453 (888)
T ss_pred             EEEeecCce-eeeec-CCCcEEEEEccCcceeEEecc--ccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhcc
Confidence            999998863 55555 568899999999999999984  37899999999999999999999999999999999999999


Q ss_pred             CCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC-----CeEE-----EeccCCCceeeeeecCCCCeEEEEecC
Q psy17682        300 EGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE-----PIVM-----VELDTSNGVMFPLYDPDTNLVYLCGKG  369 (490)
Q Consensus       300 ~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~-----~~~~-----~~~~~~~~i~~~~~s~~~~~l~~~g~~  369 (490)
                      .+. +..++.+||+..+++|+   .|.+|++||..-...     ...+     ..+.-...|.++.+||||++| +.+--
T Consensus       454 dga-IWsi~~~pD~~g~vT~s---aDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~L-aVsLL  528 (888)
T KOG0306|consen  454 DGA-IWSISLSPDNKGFVTGS---ADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLL-AVSLL  528 (888)
T ss_pred             ccc-eeeeeecCCCCceEEec---CCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEE-EEEec
Confidence            986 99999999999999998   799999999753211     1111     122334679999999999999 78889


Q ss_pred             CCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCC
Q psy17682        370 DSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSG  425 (490)
Q Consensus       370 dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~  425 (490)
                      |++|+||-+.+-+ +  .+..++|.-||.++..|||+.+++++  +.++++|-++-+.
T Consensus       529 dnTVkVyflDtlK-F--flsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGD  583 (888)
T KOG0306|consen  529 DNTVKVYFLDTLK-F--FLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGD  583 (888)
T ss_pred             cCeEEEEEeccee-e--eeeecccccceeEEeccCCcCeEEeccCCCceEEeccccch
Confidence            9999999999977 2  55566788899999999999999987  5599999998766

>KOG0277|consensus

Probab=99.98  E-value=7.5e-31  Score=216.28  Aligned_cols=287  Identities=15%  Similarity=0.166  Sum_probs=224.3

Q ss_pred             eeEEeccCCCceEEee-------eCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecc
Q psy17682         48 GLVLWHPTAQNVLLTA-------GKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISE  120 (490)
Q Consensus        48 ~~v~~~p~~~~~l~s~-------~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  120 (490)
                      .++.|||--++.|+.+       ...|.+.|-++..+.-.               ......      ........++|++
T Consensus        12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi---------------~e~~s~------d~~D~LfdV~Wse   70 (311)
T KOG0277|consen   12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGI---------------QECQSY------DTEDGLFDVAWSE   70 (311)
T ss_pred             ceeEecccccchhheeehhhcccccCceEEEEecCCCCCe---------------EEEEee------ecccceeEeeecC
Confidence            4688999766665554       23478888887632200               001111      1233577899998


Q ss_pred             ccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCc
Q psy17682        121 DYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGI  200 (490)
Q Consensus       121 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~  200 (490)
                      ..    ..++.++.+||++++|++.    ..   ..+++.++.|+..|.++.|++..+..+++++-|++|++|+....+.
T Consensus        71 ~~----e~~~~~a~GDGSLrl~d~~----~~---s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~S  139 (311)
T KOG0277|consen   71 NH----ENQVIAASGDGSLRLFDLT----MP---SKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNS  139 (311)
T ss_pred             CC----cceEEEEecCceEEEeccC----CC---CcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcc
Confidence            76    5678889999999999965    22   2367888999999999999998778899999999999999876655


Q ss_pred             ccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC-CCCEEEEEeCC
Q psy17682        201 SRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW-DGSKLLTTCKD  279 (490)
Q Consensus       201 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d  279 (490)
                      +.+       +.+|...|...+|+|...+++++++.|+++++||++.......+..|..++.++.|+. +.+.++||+.|
T Consensus       140 v~T-------f~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd  212 (311)
T KOG0277|consen  140 VQT-------FNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVD  212 (311)
T ss_pred             eEe-------ecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCC
Confidence            554       6679999999999999889999999999999999986544444888999999999998 66899999999


Q ss_pred             CeEEEEeCCCC-ceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeec
Q psy17682        280 KKMRIINPRTG-AIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYD  357 (490)
Q Consensus       280 g~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s  357 (490)
                      +.|+.||+++- .++..+.+|.-. +..+.|||. ..+|++++   .|-+++|||........... ..|..-+..+.||
T Consensus       213 ~~vr~wDir~~r~pl~eL~gh~~A-VRkvk~Sph~~~lLaSas---YDmT~riw~~~~~ds~~e~~-~~HtEFv~g~Dws  287 (311)
T KOG0277|consen  213 NLVRGWDIRNLRTPLFELNGHGLA-VRKVKFSPHHASLLASAS---YDMTVRIWDPERQDSAIETV-DHHTEFVCGLDWS  287 (311)
T ss_pred             ceEEEEehhhccccceeecCCceE-EEEEecCcchhhHhhhcc---ccceEEecccccchhhhhhh-hccceEEeccccc
Confidence            99999999975 467777787765 999999998 55788887   78899999998655433222 2455668889998


Q ss_pred             CCCCeEEEEecCCCeEEEEEe
Q psy17682        358 PDTNLVYLCGKGDSVIRYFEI  378 (490)
Q Consensus       358 ~~~~~l~~~g~~dg~i~iwd~  378 (490)
                      +-....+|+.+.|+.++||+-
T Consensus       288 ~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  288 LFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             cccCceeeecccccceeeecc
Confidence            865544588999999999984

>KOG0296|consensus

Probab=99.98  E-value=5.6e-30  Score=221.59  Aligned_cols=290  Identities=13%  Similarity=0.125  Sum_probs=233.1

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      ....+.||+++|+++.|+.++ .+||||+.+|.|+||+..++....              .+..         ....+.-
T Consensus        98 ~~~eltgHKDSVt~~~Fshdg-tlLATGdmsG~v~v~~~stg~~~~--------------~~~~---------e~~dieW  153 (399)
T KOG0296|consen   98 FAGELTGHKDSVTCCSFSHDG-TLLATGDMSGKVLVFKVSTGGEQW--------------KLDQ---------EVEDIEW  153 (399)
T ss_pred             ceeEecCCCCceEEEEEccCc-eEEEecCCCccEEEEEcccCceEE--------------Eeec---------ccCceEE
Confidence            778899999999999999999 999999999999999998875211              0000         1113455


Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI  195 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~  195 (490)
                      +.|+|..     .+++++..+|.+-+|.+.    ..    ...+++.||..++++=.|.|+| ++++++..||+|++|+.
T Consensus       154 l~WHp~a-----~illAG~~DGsvWmw~ip----~~----~~~kv~~Gh~~~ct~G~f~pdG-Kr~~tgy~dgti~~Wn~  219 (399)
T KOG0296|consen  154 LKWHPRA-----HILLAGSTDGSVWMWQIP----SQ----ALCKVMSGHNSPCTCGEFIPDG-KRILTGYDDGTIIVWNP  219 (399)
T ss_pred             EEecccc-----cEEEeecCCCcEEEEECC----Cc----ceeeEecCCCCCcccccccCCC-ceEEEEecCceEEEEec
Confidence            6778763     578889999999999986    21    3566889999999999999998 89999999999999999


Q ss_pred             CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe--------cCCCcEEEEEEc
Q psy17682        196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE--------CHPDIVYSASWN  267 (490)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--------~~~~~v~~~~~~  267 (490)
                      .+++.+..+...      ......++.++..+. .++.|+.++.+++-+..+++.+....        .+...+.++.+.
T Consensus       220 ktg~p~~~~~~~------e~~~~~~~~~~~~~~-~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~  292 (399)
T KOG0296|consen  220 KTGQPLHKITQA------EGLELPCISLNLAGS-TLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESI  292 (399)
T ss_pred             CCCceeEEeccc------ccCcCCccccccccc-eeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhc
Confidence            999877765431      234567888888885 89999999999999999998887766        344455555555


Q ss_pred             C---CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe
Q psy17682        268 W---DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE  344 (490)
Q Consensus       268 ~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~  344 (490)
                      |   .=.+.|+|+-||+|.|||+...+...... |... +..+.|.+ ..+|++++   .+|.|+.||.++++..  ...
T Consensus       293 ~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~-he~~-V~~l~w~~-t~~l~t~c---~~g~v~~wDaRtG~l~--~~y  364 (399)
T KOG0296|consen  293 PSSSKLPLAACGSVDGTIAIYDLAASTLRHICE-HEDG-VTKLKWLN-TDYLLTAC---ANGKVRQWDARTGQLK--FTY  364 (399)
T ss_pred             ccccccchhhcccccceEEEEecccchhheecc-CCCc-eEEEEEcC-cchheeec---cCceEEeeeccccceE--EEE
Confidence            4   55688999999999999999877655544 5554 99999999 55555665   6999999999998754  344


Q ss_pred             ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        345 LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       345 ~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      .+|..+|..++++|+.+++ +++|.|++.+||++.
T Consensus       365 ~GH~~~Il~f~ls~~~~~v-vT~s~D~~a~VF~v~  398 (399)
T KOG0296|consen  365 TGHQMGILDFALSPQKRLV-VTVSDDNTALVFEVP  398 (399)
T ss_pred             ecCchheeEEEEcCCCcEE-EEecCCCeEEEEecC
Confidence            5788999999999999998 899999999999874

>KOG0306|consensus

Probab=99.98  E-value=7.8e-30  Score=239.58  Aligned_cols=297  Identities=17%  Similarity=0.175  Sum_probs=241.6

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      ...+.||...|.+++++.+. ..++||+. ++++||+..+.+.                  ...+..       ..+.+.
T Consensus       366 ~i~~~GHR~dVRsl~vS~d~-~~~~Sga~-~SikiWn~~t~kc------------------iRTi~~-------~y~l~~  418 (888)
T KOG0306|consen  366 NIEIGGHRSDVRSLCVSSDS-ILLASGAG-ESIKIWNRDTLKC------------------IRTITC-------GYILAS  418 (888)
T ss_pred             eeeeccchhheeEEEeecCc-eeeeecCC-CcEEEEEccCcce------------------eEEecc-------ccEEEE
Confidence            36789999999999999987 67776664 8999999997652                  111111       034555


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP  196 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~  196 (490)
                      .|-|..     .++..+...|.+.+|++.     ...   .+.+.+.|.+.|++++.+||+ ..+++||.|.+|++||..
T Consensus       419 ~Fvpgd-----~~Iv~G~k~Gel~vfdla-----S~~---l~Eti~AHdgaIWsi~~~pD~-~g~vT~saDktVkfWdf~  484 (888)
T KOG0306|consen  419 KFVPGD-----RYIVLGTKNGELQVFDLA-----SAS---LVETIRAHDGAIWSISLSPDN-KGFVTGSADKTVKFWDFK  484 (888)
T ss_pred             EecCCC-----ceEEEeccCCceEEEEee-----hhh---hhhhhhccccceeeeeecCCC-CceEEecCCcEEEEEeEE
Confidence            666653     478889999999999996     222   344567999999999999998 899999999999999974


Q ss_pred             C-----CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCC
Q psy17682        197 D-----GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS  271 (490)
Q Consensus       197 ~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~  271 (490)
                      -     +...+.+.-.......-...|.|+.++|++. +|+++--|.+|+||-+++-+....+.+|.-+|.||..+||++
T Consensus       485 l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk-~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSk  563 (888)
T KOG0306|consen  485 LVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGK-LLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSK  563 (888)
T ss_pred             EEeccCcccceeeeeccceEEeccccEEEEEEcCCCc-EEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcC
Confidence            2     1111111111111222567799999999996 999999999999999999999999999999999999999999


Q ss_pred             EEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCce
Q psy17682        272 KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGV  351 (490)
Q Consensus       272 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i  351 (490)
                      .++|||.|.+|++|-+.=|.+-+.+.+|..+ +.++.|-|+..++.+++   .|+.++-||-........+.  +|...|
T Consensus       564 livTgSADKnVKiWGLdFGDCHKS~fAHdDS-vm~V~F~P~~~~FFt~g---KD~kvKqWDg~kFe~iq~L~--~H~~ev  637 (888)
T KOG0306|consen  564 LIVTGSADKNVKIWGLDFGDCHKSFFAHDDS-VMSVQFLPKTHLFFTCG---KDGKVKQWDGEKFEEIQKLD--GHHSEV  637 (888)
T ss_pred             eEEeccCCCceEEeccccchhhhhhhcccCc-eeEEEEcccceeEEEec---CcceEEeechhhhhhheeec--cchhee
Confidence            9999999999999999999999999999987 99999999998888887   79999999998876544433  577889


Q ss_pred             eeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        352 MFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       352 ~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      ++++.+|+|.++ ++++.|..|++|......
T Consensus       638 ~cLav~~~G~~v-vs~shD~sIRlwE~tde~  667 (888)
T KOG0306|consen  638 WCLAVSPNGSFV-VSSSHDKSIRLWERTDEI  667 (888)
T ss_pred             eeeEEcCCCCeE-EeccCCceeEeeeccCcc
Confidence            999999999999 899999999999987654

>KOG0268|consensus

Probab=99.98  E-value=1.3e-31  Score=231.38  Aligned_cols=292  Identities=16%  Similarity=0.178  Sum_probs=236.2

Q ss_pred             EecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeE
Q psy17682         38 VDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEIT  117 (490)
Q Consensus        38 ~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  117 (490)
                      ..|.||.+.|.|++=+|.....++||+.||.|+|||+..-.                                       
T Consensus        60 ~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~---------------------------------------  100 (433)
T KOG0268|consen   60 GSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRE---------------------------------------  100 (433)
T ss_pred             hhccccccccchhhcCcchhhhhhccccCceEEEEehhhhh---------------------------------------
Confidence            45899999999999999887889999999999999998632                                       


Q ss_pred             eccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCC
Q psy17682        118 ISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPD  197 (490)
Q Consensus       118 ~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~  197 (490)
                                                             ++.++..|.+.|.+|++..   ..+++++.|.+|+.|.+..
T Consensus       101 ---------------------------------------~~~~f~AH~G~V~Gi~v~~---~~~~tvgdDKtvK~wk~~~  138 (433)
T KOG0268|consen  101 ---------------------------------------CIRTFKAHEGLVRGICVTQ---TSFFTVGDDKTVKQWKIDG  138 (433)
T ss_pred             ---------------------------------------hhheeecccCceeeEEecc---cceEEecCCcceeeeeccC
Confidence                                                   2335678999999999985   5789999999999999754


Q ss_pred             CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC-CEEEEE
Q psy17682        198 GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG-SKLLTT  276 (490)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~  276 (490)
                      . ..+       ++. ....+..+.-+..+ +.++++|.  .|.|||.+...++..+.-....|.++.|+|.. ..|+++
T Consensus       139 ~-p~~-------til-g~s~~~gIdh~~~~-~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~  206 (433)
T KOG0268|consen  139 P-PLH-------TIL-GKSVYLGIDHHRKN-SVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASC  206 (433)
T ss_pred             C-cce-------eee-cccccccccccccc-ccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeee
Confidence            2 222       232 34456667666655 48899886  59999999999999999888889999999955 577777


Q ss_pred             eCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeee
Q psy17682        277 CKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLY  356 (490)
Q Consensus       277 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~  356 (490)
                      ..|+.|.+||+++..+++......  ....++|+|++..+++|.   .|..++.+|++....+.... .+|.+.|.++.|
T Consensus       207 ~sDrsIvLyD~R~~~Pl~KVi~~m--RTN~IswnPeafnF~~a~---ED~nlY~~DmR~l~~p~~v~-~dhvsAV~dVdf  280 (433)
T KOG0268|consen  207 ASDRSIVLYDLRQASPLKKVILTM--RTNTICWNPEAFNFVAAN---EDHNLYTYDMRNLSRPLNVH-KDHVSAVMDVDF  280 (433)
T ss_pred             ccCCceEEEecccCCccceeeeec--cccceecCccccceeecc---ccccceehhhhhhcccchhh-cccceeEEEecc
Confidence            799999999999999888776333  367899999888888888   79999999999988877654 378889999999


Q ss_pred             cCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--eeEEEEecCCCceEEEE
Q psy17682        357 DPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--IGRFFRLNNSGLCQVVS  431 (490)
Q Consensus       357 s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~~~~~~~~~~i~  431 (490)
                      ||.|+.+ ++||.|.+|+||.++.+..  +-+........|.++.||-|.+++++|++  .+|+|+.....-+.+++
T Consensus       281 sptG~Ef-vsgsyDksIRIf~~~~~~S--RdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Aseklgv~t  354 (433)
T KOG0268|consen  281 SPTGQEF-VSGSYDKSIRIFPVNHGHS--RDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEKLGVIT  354 (433)
T ss_pred             CCCcchh-ccccccceEEEeecCCCcc--hhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchhhhcCCCC
Confidence            9999998 8999999999999998751  11111122357999999999999999955  88999987765455554

>KOG0973|consensus

Probab=99.97  E-value=3e-30  Score=252.68  Aligned_cols=318  Identities=18%  Similarity=0.219  Sum_probs=243.1

Q ss_pred             ccccc-ceeeeEEeccCCCceEEeee--CCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         40 LLYHQ-RRVGLVLWHPTAQNVLLTAG--KEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        40 l~gH~-~~V~~v~~~p~~~~~l~s~~--~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      +.+|. ..|.+|..+|++ ..++|||  .|+.++||+...-....                    ..             
T Consensus         8 wv~H~~~~IfSIdv~pdg-~~~aTgGq~~d~~~~iW~~~~vl~~~--------------------~~-------------   53 (942)
T KOG0973|consen    8 WVNHNEKSIFSIDVHPDG-VKFATGGQVLDGGIVIWSQDPVLDEK--------------------EE-------------   53 (942)
T ss_pred             ccccCCeeEEEEEecCCc-eeEecCCccccccceeeccccccchh--------------------hh-------------
Confidence            34444 579999999999 9999999  89999999876421000                    00             


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP  196 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~  196 (490)
                                                       ....+.+.+.+...|.+.|+|+.|+||| .+||+|++|+.|.||+..
T Consensus        54 ---------------------------------~~~~l~k~l~~m~~h~~sv~CVR~S~dG-~~lAsGSDD~~v~iW~~~   99 (942)
T KOG0973|consen   54 ---------------------------------KNENLPKHLCTMDDHDGSVNCVRFSPDG-SYLASGSDDRLVMIWERA   99 (942)
T ss_pred             ---------------------------------hhcccchhheeeccccCceeEEEECCCC-CeEeeccCcceEEEeeec
Confidence                                             0001233455677899999999999999 899999999999999977


Q ss_pred             CCCc-----------ccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEE
Q psy17682        197 DGGI-----------SRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSAS  265 (490)
Q Consensus       197 ~~~~-----------~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~  265 (490)
                      ....           ...--+....+.+|...|..++|+|++. +|++++.|++|.||+.++.+.+..+.+|.+.|..+.
T Consensus       100 ~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~-~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs  178 (942)
T KOG0973|consen  100 EIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDS-LLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVS  178 (942)
T ss_pred             ccCCcccccccccccccceeeEEEEEecCCCccceeccCCCcc-EEEEecccceEEEEccccceeeeeeecccccccceE
Confidence            3100           0011124556788999999999999985 999999999999999999999999999999999999


Q ss_pred             EcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecC-----CCceeEEEEeCCCcEEEEEeC-CCceeEEEEecCCCCCCC
Q psy17682        266 WNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHE-----GSKATRAIYLKSGLIFTTGFS-KMSERQYSLRAPDHLDEP  339 (490)
Q Consensus       266 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~s~~~~~l~~~~~-~~~~~~i~iwd~~~~~~~  339 (490)
                      |.|-|++|++-+.|++|++|++.+....+.+..+.     ...+.++.|||||.+|++... .+...++.|.+..+.+. 
T Consensus       179 ~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~-  257 (942)
T KOG0973|consen  179 WDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKV-  257 (942)
T ss_pred             ECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCcee-
Confidence            99999999999999999999988876666665332     234789999999999998642 12345677777655443 


Q ss_pred             eEEEeccCCCceeeeeecCC--------C-------Ce-EEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEe
Q psy17682        340 IVMVELDTSNGVMFPLYDPD--------T-------NL-VYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMM  403 (490)
Q Consensus       340 ~~~~~~~~~~~i~~~~~s~~--------~-------~~-l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~s  403 (490)
                       .....+|..++..+.|+|.        |       .| ++|+|+.|+.|-||.....+|+.-..+.+.  ..|.+++|+
T Consensus       258 -~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~--~SI~DmsWs  334 (942)
T KOG0973|consen  258 -DKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFN--KSIVDMSWS  334 (942)
T ss_pred             -eeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhc--CceeeeeEc
Confidence             3344578889999999872        1       12 779999999999999988887654444343  489999999


Q ss_pred             eCceeEE-ee-cceeEEEEecCCCceEEE
Q psy17682        404 PKRGCDV-NS-CEIGRFFRLNNSGLCQVV  430 (490)
Q Consensus       404 p~~~~l~-~~-~~~~~~~~~~~~~~~~~i  430 (490)
                      |||..|. ++ ++.+.++.++...+-+++
T Consensus       335 pdG~~LfacS~DGtV~~i~Fee~ElG~~l  363 (942)
T KOG0973|consen  335 PDGFSLFACSLDGTVALIHFEEKELGVAL  363 (942)
T ss_pred             CCCCeEEEEecCCeEEEEEcchHHhCccc
Confidence            9996443 33 778888888775533333

>KOG0276|consensus

Probab=99.97  E-value=4.6e-30  Score=236.39  Aligned_cols=334  Identities=17%  Similarity=0.203  Sum_probs=256.0

Q ss_pred             ccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC
Q psy17682        109 RNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC  188 (490)
Q Consensus       109 ~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg  188 (490)
                      +...|.++.++|..     ..+.++-.+|.+.||+.+     +.   ..++.+.-..-+|.+..|-+.. +.+++|+.|.
T Consensus        12 rSdRVKsVd~HPte-----Pw~la~LynG~V~IWnye-----tq---tmVksfeV~~~PvRa~kfiaRk-nWiv~GsDD~   77 (794)
T KOG0276|consen   12 RSDRVKSVDFHPTE-----PWILAALYNGDVQIWNYE-----TQ---TMVKSFEVSEVPVRAAKFIARK-NWIVTGSDDM   77 (794)
T ss_pred             cCCceeeeecCCCC-----ceEEEeeecCeeEEEecc-----cc---eeeeeeeecccchhhheeeecc-ceEEEecCCc
Confidence            44568889999883     577788999999999985     22   2344555667899999999876 8999999999


Q ss_pred             cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC-eeEEEEecCCCcEEEEEEc
Q psy17682        189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG-EIMIQIECHPDIVYSASWN  267 (490)
Q Consensus       189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~  267 (490)
                      .|++|+..+++.++.       +.+|.+.|++++.+|..+ ++++++.|-+|++||.+.+ .+.+++++|..-|.+++|+
T Consensus        78 ~IrVfnynt~ekV~~-------FeAH~DyIR~iavHPt~P-~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fn  149 (794)
T KOG0276|consen   78 QIRVFNYNTGEKVKT-------FEAHSDYIRSIAVHPTLP-YVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFN  149 (794)
T ss_pred             eEEEEecccceeeEE-------eeccccceeeeeecCCCC-eEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEec
Confidence            999999999987776       456999999999999986 9999999999999999865 4778899999999999999


Q ss_pred             C-CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCC--cEEEEEeCCCceeEEEEecCCCCCCCeEEEe
Q psy17682        268 W-DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG--LIFTTGFSKMSERQYSLRAPDHLDEPIVMVE  344 (490)
Q Consensus       268 ~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~--~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~  344 (490)
                      | |.+.+++++-|++|++|.+.+..+..++.+|... +.++.+-+.|  .+|++|+   .|..++|||..+..|...+. 
T Consensus       150 PkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekG-VN~Vdyy~~gdkpylIsga---DD~tiKvWDyQtk~CV~TLe-  224 (794)
T KOG0276|consen  150 PKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKG-VNCVDYYTGGDKPYLISGA---DDLTIKVWDYQTKSCVQTLE-  224 (794)
T ss_pred             CCCccceeeeeccccEEEEEcCCCCCceeeeccccC-cceEEeccCCCcceEEecC---CCceEEEeecchHHHHHHhh-
Confidence            9 6689999999999999999999999999999987 9999998765  4888998   58999999999987655443 


Q ss_pred             ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCceeEEee-cceeEEEEec
Q psy17682        345 LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGCDVNS-CEIGRFFRLN  422 (490)
Q Consensus       345 ~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~-~~~~~~~~~~  422 (490)
                       +|...|..+.|+|.-..+ ++|+.||+++||+..+-+    ....+. +.+.+++++-.+.+..++.| ++..-+.++-
T Consensus       225 -GHt~Nvs~v~fhp~lpii-isgsEDGTvriWhs~Ty~----lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v~lg  298 (794)
T KOG0276|consen  225 -GHTNNVSFVFFHPELPII-ISGSEDGTVRIWNSKTYK----LEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTVKLG  298 (794)
T ss_pred             -cccccceEEEecCCCcEE-EEecCCccEEEecCccee----hhhhhhcCCceEEEEeecCCCCeEEEeccCCcEEEEcc
Confidence             577889999999999888 899999999999998865    222222 34678999988877776776 4444445554


Q ss_pred             CCCceEEEEEEEeC------CCcCcccCCCCCCCCCCCccchhh--hcCCCCCCCcccCCCCcCC
Q psy17682        423 NSGLCQVVSMTVPR------KSELFQDDLYPDTVGDTAALTADE--WFAGNELFQDDLYPDTVGD  479 (490)
Q Consensus       423 ~~~~~~~i~~~~p~------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  479 (490)
                      ...  ..+++...+      -.++++..+.+-....  .++.+|  -++-+......++|.++..
T Consensus       299 ree--P~vsMd~~gKIiwa~~~ei~~~~~ks~~~~~--ev~DgErL~LsvKeLgs~eiyPq~L~h  359 (794)
T KOG0276|consen  299 REE--PAVSMDSNGKIIWAVHSEIQAVNLKSVGAQK--EVTDGERLPLSVKELGSVEIYPQTLAH  359 (794)
T ss_pred             CCC--CceeecCCccEEEEcCceeeeeeceeccCcc--cccCCccccchhhhccccccchHHhcc
Confidence            433  233332222      2345555444432221  222222  2344455556777766554

>KOG0772|consensus

Probab=99.97  E-value=1.8e-30  Score=233.99  Aligned_cols=313  Identities=14%  Similarity=0.177  Sum_probs=228.6

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      ...|.+|+.-|.++++.|.| ..|+|||-|-+|++||+..-....              .....+...    ....++++
T Consensus       160 Ei~l~hgtk~Vsal~~Dp~G-aR~~sGs~Dy~v~~wDf~gMdas~--------------~~fr~l~P~----E~h~i~sl  220 (641)
T KOG0772|consen  160 EIQLKHGTKIVSALAVDPSG-ARFVSGSLDYTVKFWDFQGMDASM--------------RSFRQLQPC----ETHQINSL  220 (641)
T ss_pred             eEeccCCceEEEEeeecCCC-ceeeeccccceEEEEecccccccc--------------hhhhccCcc----ccccccee
Confidence            34689999999999999999 999999999999999998643111              011111111    12368899


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCC----cccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEE
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPN----TGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKV  192 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~----~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~i  192 (490)
                      ++|+.+     ..+.+.++....++++.++....    ..+.......-+||...++|.+|+|.....++|++.||++||
T Consensus       221 ~ys~Tg-----~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRi  295 (641)
T KOG0772|consen  221 QYSVTG-----DQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRI  295 (641)
T ss_pred             eecCCC-----CeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEE
Confidence            999875     45566677778888887642211    111112233457999999999999999899999999999999


Q ss_pred             EECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe--eE-EEEecCCC--cEEEEEEc
Q psy17682        193 WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE--IM-IQIECHPD--IVYSASWN  267 (490)
Q Consensus       193 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~--~~-~~~~~~~~--~v~~~~~~  267 (490)
                      ||+.+.+.....-.+. ...+..-+++.++|++++. ++|+|+.||.|.+|+..+..  +. ..-+.|..  .|+|+.|+
T Consensus       296 Wdv~~~k~q~qVik~k-~~~g~Rv~~tsC~~nrdg~-~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS  373 (641)
T KOG0772|consen  296 WDVNNTKSQLQVIKTK-PAGGKRVPVTSCAWNRDGK-LIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFS  373 (641)
T ss_pred             EecCCchhheeEEeec-cCCCcccCceeeecCCCcc-hhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEec
Confidence            9998665433221111 1223455789999999996 89999999999999975432  22 22236766  89999999


Q ss_pred             CCCCEEEEEeCCCeEEEEeCCCCc-eeeeeee-cCCCceeEEEEeCCCcEEEEEeC---CCceeEEEEecCCCCCCCeEE
Q psy17682        268 WDGSKLLTTCKDKKMRIINPRTGA-IEEEAVC-HEGSKATRAIYLKSGLIFTTGFS---KMSERQYSLRAPDHLDEPIVM  342 (490)
Q Consensus       268 ~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~-~~~~~~~~~~~s~~~~~l~~~~~---~~~~~~i~iwd~~~~~~~~~~  342 (490)
                      ++|++|++-+.|+++++||++..+ ++....+ ....+-+.++|||+.+++++|+.   ....+.+.+||..+.+....+
T Consensus       374 ~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki  453 (641)
T KOG0772|consen  374 YDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKI  453 (641)
T ss_pred             cccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEe
Confidence            999999999999999999999764 4444432 22234678899999999999974   224578999999887643333


Q ss_pred             EeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEe
Q psy17682        343 VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEI  378 (490)
Q Consensus       343 ~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~  378 (490)
                      ..  ....|..+.|+|.-+.| .+|+.||.+++|=-
T Consensus       454 ~i--~~aSvv~~~WhpkLNQi-~~gsgdG~~~vyYd  486 (641)
T KOG0772|consen  454 DI--STASVVRCLWHPKLNQI-FAGSGDGTAHVYYD  486 (641)
T ss_pred             cC--CCceEEEEeecchhhhe-eeecCCCceEEEEC
Confidence            22  24668899999998888 56888999987743

>KOG0281|consensus

Probab=99.97  E-value=1.9e-31  Score=229.07  Aligned_cols=274  Identities=15%  Similarity=0.200  Sum_probs=219.5

Q ss_pred             ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcE
Q psy17682        111 STANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVV  190 (490)
Q Consensus       111 ~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i  190 (490)
                      ..|.++....+       .++++..|++|.||+..        ......++.||++.|.|+.|..   ..+++|+.|.+|
T Consensus       198 kgVYClQYDD~-------kiVSGlrDnTikiWD~n--------~~~c~~~L~GHtGSVLCLqyd~---rviisGSSDsTv  259 (499)
T KOG0281|consen  198 KGVYCLQYDDE-------KIVSGLRDNTIKIWDKN--------SLECLKILTGHTGSVLCLQYDE---RVIVSGSSDSTV  259 (499)
T ss_pred             CceEEEEecch-------hhhcccccCceEEeccc--------cHHHHHhhhcCCCcEEeeeccc---eEEEecCCCceE
Confidence            35667776554       68889999999999975        3346678899999999999973   799999999999


Q ss_pred             EEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe---eEEEEecCCCcEEEEEEc
Q psy17682        191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE---IMIQIECHPDIVYSASWN  267 (490)
Q Consensus       191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~  267 (490)
                      ++||.++++++..+       ..|...|..+.|+.   .++++++.|.++.+||+.+..   +...+.+|...|+.+.|+
T Consensus       260 rvWDv~tge~l~tl-------ihHceaVLhlrf~n---g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd  329 (499)
T KOG0281|consen  260 RVWDVNTGEPLNTL-------IHHCEAVLHLRFSN---GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD  329 (499)
T ss_pred             EEEeccCCchhhHH-------hhhcceeEEEEEeC---CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc
Confidence            99999999887764       45999999999984   389999999999999998765   234466899999999996


Q ss_pred             CCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccC
Q psy17682        268 WDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDT  347 (490)
Q Consensus       268 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~  347 (490)
                        .+++++++.|++|++|++.+++.++++.+|... +.|+.+  .|+++++|+   +|.+|++||+..+.+...+.  +|
T Consensus       330 --~kyIVsASgDRTikvW~~st~efvRtl~gHkRG-IAClQY--r~rlvVSGS---SDntIRlwdi~~G~cLRvLe--GH  399 (499)
T KOG0281|consen  330 --DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG-IACLQY--RDRLVVSGS---SDNTIRLWDIECGACLRVLE--GH  399 (499)
T ss_pred             --cceEEEecCCceEEEEeccceeeehhhhccccc-ceehhc--cCeEEEecC---CCceEEEEeccccHHHHHHh--ch
Confidence              679999999999999999999999999999876 666554  689999999   79999999999988765544  46


Q ss_pred             CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEE------eeeeeCCCceeeEEEeeCceeEEeecceeEEEEe
Q psy17682        348 SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHY------INTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRL  421 (490)
Q Consensus       348 ~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~------~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~  421 (490)
                      ..-|.++.|.  .+.+ ++|+.||+|++||+..+......      .....+.+.|-.+.|..-....-+-++.+-+|++
T Consensus       400 EeLvRciRFd--~krI-VSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~fqIvsssHddtILiWdF  476 (499)
T KOG0281|consen  400 EELVRCIRFD--NKRI-VSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDF  476 (499)
T ss_pred             HHhhhheeec--Ccee-eeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeecceEEEeccCCCeEEEEEc
Confidence            5668888885  4566 89999999999999876533111      1122355678888886543322233678899999


Q ss_pred             cCCC
Q psy17682        422 NNSG  425 (490)
Q Consensus       422 ~~~~  425 (490)
                      .++.
T Consensus       477 l~~~  480 (499)
T KOG0281|consen  477 LNGP  480 (499)
T ss_pred             CCCC
Confidence            8875

>PTZ00421 coronin; Provisional

Probab=99.97  E-value=3.6e-29  Score=242.12  Aligned_cols=318  Identities=16%  Similarity=0.125  Sum_probs=216.6

Q ss_pred             ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccc------cceeeecccccCEEEEEEee-CCCCEEEEEeC
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLT------EPVVDLLYHQRRVGLVLWHP-TAQNVLLTAGS  236 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~  236 (490)
                      |-..|.....++++ ..+++++.+.....|+...+..+..+.      .....+.+|.+.|.+++|+| ++ ++|++|+.
T Consensus        19 ~~~~i~~~~~~~d~-~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~-~~LaSgS~   96 (493)
T PTZ00421         19 HFLNVTPSTALWDC-SNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDP-QKLFTASE   96 (493)
T ss_pred             ceeccccccccCCC-CCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCC-CEEEEEeC
Confidence            33455556666665 456777777777777754443221111      11123678999999999999 55 59999999


Q ss_pred             CCcEEEEECCCC-------eeEEEEecCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEE
Q psy17682        237 DNNVAIWNVGTG-------EIMIQIECHPDIVYSASWNWDG-SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAI  308 (490)
Q Consensus       237 dg~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  308 (490)
                      |++|++||+.++       +++..+.+|...|.+++|+|++ ++|++++.|++|+|||+++++....+..|... +.+++
T Consensus        97 DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~-V~sla  175 (493)
T PTZ00421         97 DGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQ-ITSLE  175 (493)
T ss_pred             CCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCc-eEEEE
Confidence            999999999764       3567788999999999999975 69999999999999999999988888888775 99999


Q ss_pred             EeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCC-ceeeeeecCCCCeEEEEe---cCCCeEEEEEecCCCCe
Q psy17682        309 YLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSN-GVMFPLYDPDTNLVYLCG---KGDSVIRYFEITAEPPF  384 (490)
Q Consensus       309 ~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~~~g---~~dg~i~iwd~~~~~~~  384 (490)
                      |+|+|.+|++++   .|+.|++||++++.......  .|.. ....+.|.+++..++++|   +.|+.|++||+++....
T Consensus       176 ~spdG~lLatgs---~Dg~IrIwD~rsg~~v~tl~--~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p  250 (493)
T PTZ00421        176 WNLDGSLLCTTS---KDKKLNIIDPRDGTIVSSVE--AHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASP  250 (493)
T ss_pred             EECCCCEEEEec---CCCEEEEEECCCCcEEEEEe--cCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCc
Confidence            999999999998   79999999999866432222  3333 345678999988885555   35899999999876533


Q ss_pred             eEEeeeeeCCCceeeEEEeeCceeEEee---cceeEEEEecCCCceEEEEEEEeC--CCcCcccCCCCCCCC--------
Q psy17682        385 VHYINTFQTPDPQRGIGMMPKRGCDVNS---CEIGRFFRLNNSGLCQVVSMTVPR--KSELFQDDLYPDTVG--------  451 (490)
Q Consensus       385 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~---~~~~~~~~~~~~~~~~~i~~~~p~--~~~~~~~~~~~~~~~--------  451 (490)
                      .... .......+....|++++.+++++   ++.+++|++.++..+....+....  +.-.+..+...+...        
T Consensus       251 ~~~~-~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk~~~dv~~~Ei~r~~~  329 (493)
T PTZ00421        251 YSTV-DLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPKWSLDTRKCEIARFYA  329 (493)
T ss_pred             eeEe-ccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEecccccccccceeeeEEEE
Confidence            2222 12222345667889999876654   558899999987743332221100  100011111111100        


Q ss_pred             ----CCCccchhhhcC-CCCCCCcccCCCCcCCccccccccccC
Q psy17682        452 ----DTAALTADEWFA-GNELFQDDLYPDTVGDTAALTADEWFA  490 (490)
Q Consensus       452 ----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (490)
                          ....++..---. ....++.+|+|++....+|+|+.|||+
T Consensus       330 l~~~~i~pis~~vpRk~~~~~fq~DlyP~t~~~~p~~ta~ew~~  373 (493)
T PTZ00421        330 LTYHSLYTIQMLLPRKQADSELQVDVYPPTFADHPAITADEYFS  373 (493)
T ss_pred             ecCCeEEEEEEEeccCCCccccccccCCCCCCCCCccCHHHHhC
Confidence                000011100111 112467899999999999999999995

>KOG2096|consensus

Probab=99.97  E-value=9.8e-30  Score=216.25  Aligned_cols=308  Identities=17%  Similarity=0.208  Sum_probs=227.0

Q ss_pred             CCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccc
Q psy17682         31 RTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRN  110 (490)
Q Consensus        31 ~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (490)
                      ..++..+..|.||.+.|++++|+.+| +.|+|++.|++|+||++++-....      +.++..+.    .         .
T Consensus        73 f~Hpl~~~~LKgH~~~vt~~~FsSdG-K~lat~~~Dr~Ir~w~~~DF~~~e------Hr~~R~nv----e---------~  132 (420)
T KOG2096|consen   73 FVHPLNVSVLKGHKKEVTDVAFSSDG-KKLATISGDRSIRLWDVRDFENKE------HRCIRQNV----E---------Y  132 (420)
T ss_pred             cccchhhhhhhccCCceeeeEEcCCC-ceeEEEeCCceEEEEecchhhhhh------hhHhhccc----c---------C
Confidence            34677778899999999999999999 999999999999999999743211      11111000    0         0


Q ss_pred             ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCC----CCcceeecccCCeeEEEECCCCCCEEEEEeC
Q psy17682        111 STANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRIN----ADHALVGGHKGPVLDIAWSPHDDNVIASGSE  186 (490)
Q Consensus       111 ~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~----~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~  186 (490)
                      ...+.+.|+||.    .+++.....+..+.+|.+.......+...    .....-+.|.-.|..+-....+ .++++++.
T Consensus       133 dhpT~V~FapDc----~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~-k~imsas~  207 (420)
T KOG2096|consen  133 DHPTRVVFAPDC----KSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNA-KYIMSASL  207 (420)
T ss_pred             CCceEEEECCCc----ceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCc-eEEEEecC
Confidence            135678999986    56777778899999998874333222111    1122234566777777776544 89999999


Q ss_pred             CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC---CC-----eeEEEEecCC
Q psy17682        187 DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG---TG-----EIMIQIECHP  258 (490)
Q Consensus       187 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~---~~-----~~~~~~~~~~  258 (490)
                      |..|.+|+++ |+.+..+..       ....-+..+.+|+|+ ++++++..-.|++|.+-   .|     ..+..+++|.
T Consensus       208 dt~i~lw~lk-Gq~L~~idt-------nq~~n~~aavSP~GR-Fia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~  278 (420)
T KOG2096|consen  208 DTKICLWDLK-GQLLQSIDT-------NQSSNYDAAVSPDGR-FIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQ  278 (420)
T ss_pred             CCcEEEEecC-Cceeeeecc-------ccccccceeeCCCCc-EEEEecCCCCceEEEEEeccCcchhhhhhhheeccch
Confidence            9999999997 777666543       455567889999996 89999998999999863   22     2456788999


Q ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-------Cceeeeee---ecCCCceeEEEEeCCCcEEEEEeCCCceeEE
Q psy17682        259 DIVYSASWNWDGSKLLTTCKDKKMRIINPRT-------GAIEEEAV---CHEGSKATRAIYLKSGLIFTTGFSKMSERQY  328 (490)
Q Consensus       259 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~---~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i  328 (490)
                      ..|..++|+++.+.+++.+.||+++|||+.-       .+.+++..   ...+.....+..+|+|..|+.+.    ...+
T Consensus       279 saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~----gs~l  354 (420)
T KOG2096|consen  279 SAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF----GSDL  354 (420)
T ss_pred             hheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec----CCce
Confidence            9999999999999999999999999999862       12222221   11223366899999999999885    6789


Q ss_pred             EEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       329 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      +++..++++...... .-|...|.+++|+++|+++ +++ .|..++++.-.
T Consensus       355 ~~~~se~g~~~~~~e-~~h~~~Is~is~~~~g~~~-atc-Gdr~vrv~~nt  402 (420)
T KOG2096|consen  355 KVFASEDGKDYPELE-DIHSTTISSISYSSDGKYI-ATC-GDRYVRVIRNT  402 (420)
T ss_pred             EEEEcccCccchhHH-HhhcCceeeEEecCCCcEE-eee-cceeeeeecCC
Confidence            999988865433333 3466789999999999999 454 48889988743

>KOG0310|consensus

Probab=99.97  E-value=1.2e-29  Score=227.58  Aligned_cols=239  Identities=19%  Similarity=0.276  Sum_probs=202.1

Q ss_pred             ecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEE
Q psy17682        162 GGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVA  241 (490)
Q Consensus       162 ~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~  241 (490)
                      ...++.|.+++|..|| .+|+.|...|.|+|+|+.+...++.       +.+|+.++..+.|+|++..+|++|+.|+.++
T Consensus        65 srFk~~v~s~~fR~DG-~LlaaGD~sG~V~vfD~k~r~iLR~-------~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k  136 (487)
T KOG0310|consen   65 SRFKDVVYSVDFRSDG-RLLAAGDESGHVKVFDMKSRVILRQ-------LYAHQAPVHVTKFSPQDNTMLVSGSDDKVVK  136 (487)
T ss_pred             HhhccceeEEEeecCC-eEEEccCCcCcEEEeccccHHHHHH-------HhhccCceeEEEecccCCeEEEecCCCceEE
Confidence            3456789999999999 8999999999999999766444444       5569999999999999888999999999999


Q ss_pred             EEECCCCeeEEEEecCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCC-ceeeeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682        242 IWNVGTGEIMIQIECHPDIVYSASWNW-DGSKLLTTCKDKKMRIINPRTG-AIEEEAVCHEGSKATRAIYLKSGLIFTTG  319 (490)
Q Consensus       242 iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~~  319 (490)
                      +||+.+......+.+|++.|.|.+|+| ++..+++|+.||+|++||++.. ..+.++. |. .++..+.+-|.|.+++++
T Consensus       137 ~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-hg-~pVe~vl~lpsgs~iasA  214 (487)
T KOG0310|consen  137 YWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-HG-CPVESVLALPSGSLIASA  214 (487)
T ss_pred             EEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec-CC-CceeeEEEcCCCCEEEEc
Confidence            999998887668889999999999999 4568999999999999999987 4455543 44 459999999999999998


Q ss_pred             eCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceee
Q psy17682        320 FSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRG  399 (490)
Q Consensus       320 ~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~  399 (490)
                      +    ...+++||+.++.+..... ..|...|+++.+..++..| ++|+-|+.|++||+.+-+    .+..+.-++||.+
T Consensus       215 g----Gn~vkVWDl~~G~qll~~~-~~H~KtVTcL~l~s~~~rL-lS~sLD~~VKVfd~t~~K----vv~s~~~~~pvLs  284 (487)
T KOG0310|consen  215 G----GNSVKVWDLTTGGQLLTSM-FNHNKTVTCLRLASDSTRL-LSGSLDRHVKVFDTTNYK----VVHSWKYPGPVLS  284 (487)
T ss_pred             C----CCeEEEEEecCCceehhhh-hcccceEEEEEeecCCceE-eecccccceEEEEccceE----EEEeeecccceee
Confidence            6    7899999999766544333 3478899999999999998 799999999999987765    7777788889999


Q ss_pred             EEEeeCceeEEeecceeEEEE
Q psy17682        400 IGMMPKRGCDVNSCEIGRFFR  420 (490)
Q Consensus       400 ~~~sp~~~~l~~~~~~~~~~~  420 (490)
                      ++.+|++..++.|.+++-+..
T Consensus       285 iavs~dd~t~viGmsnGlv~~  305 (487)
T KOG0310|consen  285 IAVSPDDQTVVIGMSNGLVSI  305 (487)
T ss_pred             EEecCCCceEEEecccceeee
Confidence            999999999999866544433

>KOG0277|consensus

Probab=99.97  E-value=4.5e-30  Score=211.72  Aligned_cols=288  Identities=14%  Similarity=0.192  Sum_probs=223.0

Q ss_pred             CCeeEeccccccceEEE----EEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC
Q psy17682        113 ANEITISEDYVKEFKEE----IRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC  188 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~----~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg  188 (490)
                      ..++.|||-.-.+ +++    .....+.|.+.|.++.    ..+.+. .... ..-.+.+..++|++..++.+++++.||
T Consensus        11 GysvqfSPf~~nr-LavAt~q~yGl~G~G~L~ile~~----~~~gi~-e~~s-~d~~D~LfdV~Wse~~e~~~~~a~GDG   83 (311)
T KOG0277|consen   11 GYSVQFSPFVENR-LAVATAQHYGLAGNGRLFILEVT----DPKGIQ-ECQS-YDTEDGLFDVAWSENHENQVIAASGDG   83 (311)
T ss_pred             cceeEecccccch-hheeehhhcccccCceEEEEecC----CCCCeE-EEEe-eecccceeEeeecCCCcceEEEEecCc
Confidence            3456677654222 221    1223678889998875    222211 1112 234688999999999889999999999


Q ss_pred             cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC
Q psy17682        189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW  268 (490)
Q Consensus       189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~  268 (490)
                      +++|||+....      .|+..++.|...|.++.|++..+..+++++.|++|++|+...++.++++.+|...|+..+|+|
T Consensus        84 SLrl~d~~~~s------~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp  157 (311)
T KOG0277|consen   84 SLRLFDLTMPS------KPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSP  157 (311)
T ss_pred             eEEEeccCCCC------cchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCC
Confidence            99999954321      355667779999999999998777889999999999999999999999999999999999999


Q ss_pred             -CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc
Q psy17682        269 -DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD  346 (490)
Q Consensus       269 -~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~  346 (490)
                       .++.+++++.|+++++||++.......+..|... +.++.|+.- .+++++|+   .|+.|+.||+++.+.|+... .+
T Consensus       158 ~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~E-il~cdw~ky~~~vl~Tg~---vd~~vr~wDir~~r~pl~eL-~g  232 (311)
T KOG0277|consen  158 HIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSE-ILCCDWSKYNHNVLATGG---VDNLVRGWDIRNLRTPLFEL-NG  232 (311)
T ss_pred             CCCCeEEEccCCceEEEEEecCCCceeEEEeccce-eEeecccccCCcEEEecC---CCceEEEEehhhccccceee-cC
Confidence             6689999999999999999976555558888754 999999864 66888887   79999999999988776544 57


Q ss_pred             CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce-eEEee--cceeEEEE
Q psy17682        347 TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG-CDVNS--CEIGRFFR  420 (490)
Q Consensus       347 ~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~--~~~~~~~~  420 (490)
                      |.-.|..++|||...-|+++++.|-+++|||...+....+...  .|.+-+.++.||+-.. .+++.  ++.+.+|+
T Consensus       233 h~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~--~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~  307 (311)
T KOG0277|consen  233 HGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVD--HHTEFVCGLDWSLFDPGQVASTGWDELLYVWN  307 (311)
T ss_pred             CceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhh--ccceEEeccccccccCceeeecccccceeeec
Confidence            7778999999999888889999999999999987654333332  3457889999998643 44433  55666765

>KOG0283|consensus

Probab=99.97  E-value=3.4e-30  Score=246.15  Aligned_cols=252  Identities=19%  Similarity=0.257  Sum_probs=201.6

Q ss_pred             eee-cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC----------------------------c--c--c----
Q psy17682        160 LVG-GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG----------------------------I--S--R----  202 (490)
Q Consensus       160 ~~~-~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~----------------------------~--~--~----  202 (490)
                      .+. .|++.|+++.|++|| .+||+||+|+.|+||.+...+                            .  .  .    
T Consensus       261 e~~~ah~gaIw~mKFS~DG-KyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~  339 (712)
T KOG0283|consen  261 EISNAHKGAIWAMKFSHDG-KYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS  339 (712)
T ss_pred             ccccccCCcEEEEEeCCCC-ceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence            344 899999999999999 899999999999999875500                            0  0  0    


Q ss_pred             -----------------ccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEE
Q psy17682        203 -----------------TLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSAS  265 (490)
Q Consensus       203 -----------------~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~  265 (490)
                                       -...|...+.||.+.|.++.|+.++  +|++++.|.+||+|++...++++.|. |..-|+|++
T Consensus       340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~--fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVa  416 (712)
T KOG0283|consen  340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN--FLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVA  416 (712)
T ss_pred             ccccCCccccCCCccccccccchhhhhccchhheecccccCC--eeEeccccccEEeecCCCcceeeEEe-cCCeeEEEE
Confidence                             0015667789999999999999885  89999999999999999999999998 999999999


Q ss_pred             EcC-CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe
Q psy17682        266 WNW-DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE  344 (490)
Q Consensus       266 ~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~  344 (490)
                      |+| |.++|++|+-||.+|||++...+.+.-...+.  .|++++|.|+|+..++|+   .+|.+++|+....+......-
T Consensus       417 FnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~--lITAvcy~PdGk~avIGt---~~G~C~fY~t~~lk~~~~~~I  491 (712)
T KOG0283|consen  417 FNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRD--LITAVCYSPDGKGAVIGT---FNGYCRFYDTEGLKLVSDFHI  491 (712)
T ss_pred             ecccCCCcEeecccccceEEeecCcCeeEeehhhhh--hheeEEeccCCceEEEEE---eccEEEEEEccCCeEEEeeeE
Confidence            999 88999999999999999999887766555543  499999999999999999   799999999986542221111


Q ss_pred             cc------CCCceeeeeecCCCC-eEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--e
Q psy17682        345 LD------TSNGVMFPLYDPDTN-LVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--I  415 (490)
Q Consensus       345 ~~------~~~~i~~~~~s~~~~-~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~  415 (490)
                      ..      ....|+.+.|.|... .+ ++.+.|..|||||.++.+ ++..+..+..........|+.||++++++++  .
T Consensus       492 ~~~~~Kk~~~~rITG~Q~~p~~~~~v-LVTSnDSrIRI~d~~~~~-lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~  569 (712)
T KOG0283|consen  492 RLHNKKKKQGKRITGLQFFPGDPDEV-LVTSNDSRIRIYDGRDKD-LVHKFKGFRNTSSQISASFSSDGKHIVSASEDSW  569 (712)
T ss_pred             eeccCccccCceeeeeEecCCCCCeE-EEecCCCceEEEeccchh-hhhhhcccccCCcceeeeEccCCCEEEEeecCce
Confidence            11      122699999987554 34 456789999999998766 3445555555566788899999999999966  5


Q ss_pred             eEEEEec
Q psy17682        416 GRFFRLN  422 (490)
Q Consensus       416 ~~~~~~~  422 (490)
                      +.+|+..
T Consensus       570 VYiW~~~  576 (712)
T KOG0283|consen  570 VYIWKND  576 (712)
T ss_pred             EEEEeCC
Confidence            6677763

>KOG1446|consensus

Probab=99.97  E-value=2.5e-28  Score=208.18  Aligned_cols=294  Identities=13%  Similarity=0.149  Sum_probs=228.3

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      +.+.+..-...|+++.|+++| .+|++++.|.+++|+|..++.+..                                  
T Consensus         6 ~ak~f~~~~~~i~sl~fs~~G-~~litss~dDsl~LYd~~~g~~~~----------------------------------   50 (311)
T KOG1446|consen    6 PAKVFRETNGKINSLDFSDDG-LLLITSSEDDSLRLYDSLSGKQVK----------------------------------   50 (311)
T ss_pred             cccccccCCCceeEEEecCCC-CEEEEecCCCeEEEEEcCCCceee----------------------------------
Confidence            444555667889999999999 888889999999999998865211                                  


Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeC--CCcEEEE
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSE--DCVVKVW  193 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~--dg~i~iw  193 (490)
                                                                  ++..++-.|..++|.... +.++.++.  |.+||.-
T Consensus        51 --------------------------------------------ti~skkyG~~~~~Fth~~-~~~i~sStk~d~tIryL   85 (311)
T KOG1446|consen   51 --------------------------------------------TINSKKYGVDLACFTHHS-NTVIHSSTKEDDTIRYL   85 (311)
T ss_pred             --------------------------------------------EeecccccccEEEEecCC-ceEEEccCCCCCceEEE
Confidence                                                        222344456667776544 45555555  8899999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  273 (490)
                      ++.+++.++.       +.||...|.+++.+|-++ .+++++.|++|++||++..++...+....  -..++|.|+|-++
T Consensus        86 sl~dNkylRY-------F~GH~~~V~sL~~sP~~d-~FlS~S~D~tvrLWDlR~~~cqg~l~~~~--~pi~AfDp~GLif  155 (311)
T KOG1446|consen   86 SLHDNKYLRY-------FPGHKKRVNSLSVSPKDD-TFLSSSLDKTVRLWDLRVKKCQGLLNLSG--RPIAAFDPEGLIF  155 (311)
T ss_pred             EeecCceEEE-------cCCCCceEEEEEecCCCC-eEEecccCCeEEeeEecCCCCceEEecCC--CcceeECCCCcEE
Confidence            9999988876       557999999999999985 99999999999999999888777765333  3358899999999


Q ss_pred             EEEeCCCeEEEEeCCCC--ceeeeeee--cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCC
Q psy17682        274 LTTCKDKKMRIINPRTG--AIEEEAVC--HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSN  349 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~--~~~~~~~~--~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~  349 (490)
                      |++.....|++||+|.-  .+..++..  ........+.|||+|++++.++   ..+.+++.|.-.+.....+.......
T Consensus       156 A~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT---~~s~~~~lDAf~G~~~~tfs~~~~~~  232 (311)
T KOG1446|consen  156 ALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLST---NASFIYLLDAFDGTVKSTFSGYPNAG  232 (311)
T ss_pred             EEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEe---CCCcEEEEEccCCcEeeeEeeccCCC
Confidence            99998889999999974  34444442  2234589999999999999888   67889999988877444443332222


Q ss_pred             c-eeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecCCC
Q psy17682        350 G-VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSG  425 (490)
Q Consensus       350 ~-i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~~  425 (490)
                      . -....|+||++++ ++|+.||+|.+|+++++.++......  +..++.++.|+|....++++++.+.+|......
T Consensus       233 ~~~~~a~ftPds~Fv-l~gs~dg~i~vw~~~tg~~v~~~~~~--~~~~~~~~~fnP~~~mf~sa~s~l~fw~p~~~~  306 (311)
T KOG1446|consen  233 NLPLSATFTPDSKFV-LSGSDDGTIHVWNLETGKKVAVLRGP--NGGPVSCVRFNPRYAMFVSASSNLVFWLPDEDA  306 (311)
T ss_pred             CcceeEEECCCCcEE-EEecCCCcEEEEEcCCCcEeeEecCC--CCCCccccccCCceeeeeecCceEEEEeccccc
Confidence            2 2577899999999 79999999999999999843322211  457899999999999999999999999887654

>KOG0264|consensus

Probab=99.97  E-value=1.3e-29  Score=225.72  Aligned_cols=272  Identities=16%  Similarity=0.287  Sum_probs=222.8

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      .....-|.+.|+.+.+-|..+.+++|.+..+.|.|||...-.-..                 .                 
T Consensus       117 i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~-----------------~-----------------  162 (422)
T KOG0264|consen  117 ISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKP-----------------K-----------------  162 (422)
T ss_pred             EEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcc-----------------c-----------------
Confidence            334566999999999999999999999999999999987532100                 0                 


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP  196 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~  196 (490)
                                                       ..+. ...-..+.||++.=.+++|++...-.|++|+.|++|++||+.
T Consensus       163 ---------------------------------~~~~-~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~  208 (422)
T KOG0264|consen  163 ---------------------------------ASGE-CRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDIN  208 (422)
T ss_pred             ---------------------------------cccc-CCCceEEEeecccccccccccccceeEeeccCCCcEEEEecc
Confidence                                             0000 012225679998888999999887899999999999999998


Q ss_pred             CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC--CCeeEEEEecCCCcEEEEEEcC-CCCEE
Q psy17682        197 DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG--TGEIMIQIECHPDIVYSASWNW-DGSKL  273 (490)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~v~~~~~~~-~~~~l  273 (490)
                      ..........|...+.+|...|..++|++....+|++++.|+.+.|||+|  +.++.....+|.+.|.|++|+| ++..|
T Consensus       209 ~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~il  288 (422)
T KOG0264|consen  209 AESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFIL  288 (422)
T ss_pred             ccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceE
Confidence            66554344467777899999999999999988899999999999999999  5566777789999999999999 66789


Q ss_pred             EEEeCCCeEEEEeCCCC-ceeeeeeecCCCceeEEEEeCCCc-EEEEEeCCCceeEEEEecCCCCCCCe-----------
Q psy17682        274 LTTCKDKKMRIINPRTG-AIEEEAVCHEGSKATRAIYLKSGL-IFTTGFSKMSERQYSLRAPDHLDEPI-----------  340 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~s~~~~-~l~~~~~~~~~~~i~iwd~~~~~~~~-----------  340 (490)
                      |+|+.|++|++||+|+. +++.++.+|... +..+.|+|... +|++++   .|+.+.+||+.......           
T Consensus       289 AT~S~D~tV~LwDlRnL~~~lh~~e~H~de-v~~V~WSPh~etvLASSg---~D~rl~vWDls~ig~eq~~eda~dgppE  364 (422)
T KOG0264|consen  289 ATGSADKTVALWDLRNLNKPLHTFEGHEDE-VFQVEWSPHNETVLASSG---TDRRLNVWDLSRIGEEQSPEDAEDGPPE  364 (422)
T ss_pred             EeccCCCcEEEeechhcccCceeccCCCcc-eEEEEeCCCCCceeEecc---cCCcEEEEeccccccccChhhhccCCcc
Confidence            99999999999999975 567888888886 99999999854 666665   79999999998644322           


Q ss_pred             -EEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        341 -VMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       341 -~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                       .+...+|...|..+.|+|+...++++.+.|+.+.||++..
T Consensus       365 llF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~  405 (422)
T KOG0264|consen  365 LLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE  405 (422)
T ss_pred             eeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence             2444567788999999999999999999999999999875

>KOG0288|consensus

Probab=99.97  E-value=1.8e-30  Score=227.92  Aligned_cols=290  Identities=16%  Similarity=0.225  Sum_probs=234.6

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      .-...+..|.+.|+.+.|-++. ..|++||.|..|++|+...+...                ....+.+     ....++
T Consensus       166 ~~~~~ld~h~gev~~v~~l~~s-dtlatgg~Dr~Ik~W~v~~~k~~----------------~~~tLaG-----s~g~it  223 (459)
T KOG0288|consen  166 RALFVLDAHEGEVHDVEFLRNS-DTLATGGSDRIIKLWNVLGEKSE----------------LISTLAG-----SLGNIT  223 (459)
T ss_pred             hhhhhhhccccccceeEEccCc-chhhhcchhhhhhhhhcccchhh----------------hhhhhhc-----cCCCcc
Confidence            3445678899999999999987 78999999999999998765411                1111111     112477


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                      .+.+.++.     ..+.+++.++.+++|+.+        ..+...++.||++.|+++.|.... ..+++|+.|.+|++||
T Consensus       224 ~~d~d~~~-----~~~iAas~d~~~r~Wnvd--------~~r~~~TLsGHtdkVt~ak~~~~~-~~vVsgs~DRtiK~WD  289 (459)
T KOG0288|consen  224 SIDFDSDN-----KHVIAASNDKNLRLWNVD--------SLRLRHTLSGHTDKVTAAKFKLSH-SRVVSGSADRTIKLWD  289 (459)
T ss_pred             eeeecCCC-----ceEEeecCCCceeeeecc--------chhhhhhhcccccceeeehhhccc-cceeeccccchhhhhh
Confidence            88887764     467778999999999986        233566889999999999998755 5699999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEE
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLL  274 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  274 (490)
                      +....+.+++-        -.+.+..+..++   ..+++|..|++|++||.++..+......+ +.|+++..++++..++
T Consensus       290 l~k~~C~kt~l--------~~S~cnDI~~~~---~~~~SgH~DkkvRfwD~Rs~~~~~sv~~g-g~vtSl~ls~~g~~lL  357 (459)
T KOG0288|consen  290 LQKAYCSKTVL--------PGSQCNDIVCSI---SDVISGHFDKKVRFWDIRSADKTRSVPLG-GRVTSLDLSMDGLELL  357 (459)
T ss_pred             hhhhheecccc--------ccccccceEecc---eeeeecccccceEEEeccCCceeeEeecC-cceeeEeeccCCeEEe
Confidence            99988776543        334566666652   37899999999999999999999988865 4899999999999999


Q ss_pred             EEeCCCeEEEEeCCCCceeeeeeec---CCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCce
Q psy17682        275 TTCKDKKMRIINPRTGAIEEEAVCH---EGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGV  351 (490)
Q Consensus       275 ~~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i  351 (490)
                      +++.|.++.+.|+++.+....+...   .+...+.+.|||++.|+++|+   .||.|+||++.+++.............|
T Consensus       358 sssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS---~dgsv~iW~v~tgKlE~~l~~s~s~~aI  434 (459)
T KOG0288|consen  358 SSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGS---ADGSVYIWSVFTGKLEKVLSLSTSNAAI  434 (459)
T ss_pred             eecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeecc---CCCcEEEEEccCceEEEEeccCCCCcce
Confidence            9999999999999999888777632   122378999999999999999   7999999999998766555554444479


Q ss_pred             eeeeecCCCCeEEEEecCCCeEEEE
Q psy17682        352 MFPLYDPDTNLVYLCGKGDSVIRYF  376 (490)
Q Consensus       352 ~~~~~s~~~~~l~~~g~~dg~i~iw  376 (490)
                      ++++|+|.|.+| ++++.++.+.+|
T Consensus       435 ~s~~W~~sG~~L-lsadk~~~v~lW  458 (459)
T KOG0288|consen  435 TSLSWNPSGSGL-LSADKQKAVTLW  458 (459)
T ss_pred             EEEEEcCCCchh-hcccCCcceEec
Confidence            999999999999 678899999998

>KOG0299|consensus

Probab=99.97  E-value=1.1e-28  Score=219.68  Aligned_cols=312  Identities=16%  Similarity=0.175  Sum_probs=243.1

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      ...+..|..+|.+++++|++ .+.+++++|++|.-|+..++......        ..+..+                   
T Consensus       135 ~~~~~~H~~s~~~vals~d~-~~~fsask~g~i~kw~v~tgk~~~~i--------~~~~ev-------------------  186 (479)
T KOG0299|consen  135 FRVIGKHQLSVTSVALSPDD-KRVFSASKDGTILKWDVLTGKKDRYI--------IERDEV-------------------  186 (479)
T ss_pred             ceeeccccCcceEEEeeccc-cceeecCCCcceeeeehhcCcccccc--------cccchh-------------------
Confidence            67788999999999999999 89999999999999999887622100        000000                   


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP  196 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~  196 (490)
                                               ..      ..+...+.. . .+|...+.+++.++|| .+|++|+.|..|.||+.+
T Consensus       187 -------------------------~k------~~~~~~k~~-r-~~h~keil~~avS~Dg-kylatgg~d~~v~Iw~~~  232 (479)
T KOG0299|consen  187 -------------------------LK------SHGNPLKES-R-KGHVKEILTLAVSSDG-KYLATGGRDRHVQIWDCD  232 (479)
T ss_pred             -------------------------hh------hccCCCCcc-c-ccccceeEEEEEcCCC-cEEEecCCCceEEEecCc
Confidence                                     00      000000011 1 3899999999999999 899999999999999999


Q ss_pred             CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEE
Q psy17682        197 DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTT  276 (490)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  276 (490)
                      +.+.++.       +.+|.+.|.+++|-... +.+++++.|+.|++|+++....+.++-+|.+.|..+....-++.+-+|
T Consensus       233 t~ehv~~-------~~ghr~~V~~L~fr~gt-~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVG  304 (479)
T KOG0299|consen  233 TLEHVKV-------FKGHRGAVSSLAFRKGT-SELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVG  304 (479)
T ss_pred             ccchhhc-------ccccccceeeeeeecCc-cceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEec
Confidence            9876665       55699999999998765 589999999999999999998999999999999999988888888888


Q ss_pred             eCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccC---------
Q psy17682        277 CKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDT---------  347 (490)
Q Consensus       277 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~---------  347 (490)
                      +.|+++++|++... ....+.++.+. +-+++|-.+. .+++|+   .+|.|.+|++.+.+........++         
T Consensus       305 grDrT~rlwKi~ee-sqlifrg~~~s-idcv~~In~~-HfvsGS---dnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~  378 (479)
T KOG0299|consen  305 GRDRTVRLWKIPEE-SQLIFRGGEGS-IDCVAFINDE-HFVSGS---DNGSIALWSLLKKKPLFTSRLAHGVIPELDPVN  378 (479)
T ss_pred             cccceeEEEecccc-ceeeeeCCCCC-eeeEEEeccc-ceeecc---CCceEEEeeecccCceeEeeccccccCCccccc
Confidence            89999999999543 33445566655 8888887665 456777   589999999987554433332211         


Q ss_pred             -CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc----eeEEEEec
Q psy17682        348 -SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE----IGRFFRLN  422 (490)
Q Consensus       348 -~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~----~~~~~~~~  422 (490)
                       ...|++++..|...++ ++|+.+|.|++|.+.++-..+..+..+...+.|++++|+++|..++++.+    .+|.|.+.
T Consensus       379 ~~~Witsla~i~~sdL~-asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivagiGkEhRlGRW~~~k  457 (479)
T KOG0299|consen  379 GNFWITSLAVIPGSDLL-ASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAGIGKEHRLGRWWCLK  457 (479)
T ss_pred             cccceeeeEecccCceE-EecCCCCceEEEEecCCccccceeeecccccEEEEEEEccCCCEEEEecccccccceeeEee
Confidence             1257889999988777 99999999999999998656677777777789999999999998888755    55666665


Q ss_pred             CCC
Q psy17682        423 NSG  425 (490)
Q Consensus       423 ~~~  425 (490)
                      ...
T Consensus       458 ~~~  460 (479)
T KOG0299|consen  458 SGK  460 (479)
T ss_pred             ccc
Confidence            543

>KOG0316|consensus

Probab=99.97  E-value=3.4e-29  Score=204.29  Aligned_cols=245  Identities=14%  Similarity=0.156  Sum_probs=204.7

Q ss_pred             CcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC
Q psy17682        157 DHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS  236 (490)
Q Consensus       157 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~  236 (490)
                      ...++.+|+++|..+.|+-+| ++.++++.|.+|++|+...+.+++++       .+|...|..++.+.++. .|++|+.
T Consensus         9 r~~~l~~~qgaV~avryN~dG-nY~ltcGsdrtvrLWNp~rg~liktY-------sghG~EVlD~~~s~Dns-kf~s~Gg   79 (307)
T KOG0316|consen    9 RLSILDCAQGAVRAVRYNVDG-NYCLTCGSDRTVRLWNPLRGALIKTY-------SGHGHEVLDAALSSDNS-KFASCGG   79 (307)
T ss_pred             hceeecccccceEEEEEccCC-CEEEEcCCCceEEeecccccceeeee-------cCCCceeeecccccccc-ccccCCC
Confidence            456778999999999999998 99999999999999999999887764       46999999999999985 8999999


Q ss_pred             CCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--ceeeeeeecCCCceeEEEEeCCCc
Q psy17682        237 DNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTG--AIEEEAVCHEGSKATRAIYLKSGL  314 (490)
Q Consensus       237 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~s~~~~  314 (490)
                      |..+.+||+.+|+.++.+.+|.++|+.+.|+.+...+++|+.|.++++||.|+.  ++++.+...... +.++..  .+.
T Consensus        80 Dk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~-V~Si~v--~~h  156 (307)
T KOG0316|consen   80 DKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDG-VSSIDV--AEH  156 (307)
T ss_pred             CceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCc-eeEEEe--ccc
Confidence            999999999999999999999999999999999999999999999999999875  566766644443 666655  466


Q ss_pred             EEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC
Q psy17682        315 IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP  394 (490)
Q Consensus       315 ~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~  394 (490)
                      .+++|+   .||+++.||++.+..    ..--...+|++++|++|++.+ +.++.|+++++.|-.+++    .+..+.++
T Consensus       157 eIvaGS---~DGtvRtydiR~G~l----~sDy~g~pit~vs~s~d~nc~-La~~l~stlrLlDk~tGk----lL~sYkGh  224 (307)
T KOG0316|consen  157 EIVAGS---VDGTVRTYDIRKGTL----SSDYFGHPITSVSFSKDGNCS-LASSLDSTLRLLDKETGK----LLKSYKGH  224 (307)
T ss_pred             EEEeec---cCCcEEEEEeeccee----ehhhcCCcceeEEecCCCCEE-EEeeccceeeecccchhH----HHHHhccc
Confidence            788888   799999999998752    211234579999999999999 678899999999999998    44444433


Q ss_pred             ---CceeeEEEeeCceeEEeecc--eeEEEEecCCC
Q psy17682        395 ---DPQRGIGMMPKRGCDVNSCE--IGRFFRLNNSG  425 (490)
Q Consensus       395 ---~~i~~~~~sp~~~~l~~~~~--~~~~~~~~~~~  425 (490)
                         +.-...+++.....++++++  .+.+|+|.+..
T Consensus       225 kn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~  260 (307)
T KOG0316|consen  225 KNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDET  260 (307)
T ss_pred             ccceeeeeeeecccceeEEeccCCceEEEEEeccce
Confidence               34466778877778888755  66788888876

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.97  E-value=6.4e-28  Score=222.62  Aligned_cols=247  Identities=21%  Similarity=0.326  Sum_probs=207.6

Q ss_pred             ceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC
Q psy17682        159 ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN  238 (490)
Q Consensus       159 ~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg  238 (490)
                      .++.+|.++|.+++|+|++ .++++++.||.|++|++.+++....       +..|...+..+.|+|+++ .+++++.||
T Consensus         3 ~~~~~h~~~i~~~~~~~~~-~~l~~~~~~g~i~i~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~~-~l~~~~~~~   73 (289)
T cd00200           3 RTLKGHTGGVTCVAFSPDG-KLLATGSGDGTIKVWDLETGELLRT-------LKGHTGPVRDVAASADGT-YLASGSSDK   73 (289)
T ss_pred             hHhcccCCCEEEEEEcCCC-CEEEEeecCcEEEEEEeeCCCcEEE-------EecCCcceeEEEECCCCC-EEEEEcCCC
Confidence            3567999999999999987 8999999999999999987764333       445888899999999984 899999999


Q ss_pred             cEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEE
Q psy17682        239 NVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTT  318 (490)
Q Consensus       239 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~  318 (490)
                      .|++||+.+++.+..+..|...+.++.|+++++++++++.++.+++||+++++....+..|... +.++.|+|++.++++
T Consensus        74 ~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~  152 (289)
T cd00200          74 TIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDW-VNSVAFSPDGTFVAS  152 (289)
T ss_pred             eEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCc-EEEEEEcCcCCEEEE
Confidence            9999999988888888889889999999999888888888999999999988888888767654 999999999999988


Q ss_pred             EeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee-eCCCce
Q psy17682        319 GFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF-QTPDPQ  397 (490)
Q Consensus       319 ~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~i  397 (490)
                      ++   .++.+++||++..+......  .+...+.++.|+|+++.+ ++++.|+.|++||+..++    .+..+ .+..++
T Consensus       153 ~~---~~~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l-~~~~~~~~i~i~d~~~~~----~~~~~~~~~~~i  222 (289)
T cd00200         153 SS---QDGTIKLWDLRTGKCVATLT--GHTGEVNSVAFSPDGEKL-LSSSSDGTIKLWDLSTGK----CLGTLRGHENGV  222 (289)
T ss_pred             Ec---CCCcEEEEEccccccceeEe--cCccccceEEECCCcCEE-EEecCCCcEEEEECCCCc----eecchhhcCCce
Confidence            86   58899999998655433333  455679999999999888 566679999999999876    33333 445689


Q ss_pred             eeEEEeeCceeEEee--cceeEEEEecCCC
Q psy17682        398 RGIGMMPKRGCDVNS--CEIGRFFRLNNSG  425 (490)
Q Consensus       398 ~~~~~sp~~~~l~~~--~~~~~~~~~~~~~  425 (490)
                      .+++|+|++.+++++  ++.+++|++..+.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~  252 (289)
T cd00200         223 NSVAFSPDGYLLASGSEDGTIRVWDLRTGE  252 (289)
T ss_pred             EEEEEcCCCcEEEEEcCCCcEEEEEcCCce
Confidence            999999998888877  4588899988755

>PTZ00420 coronin; Provisional

Probab=99.97  E-value=7.8e-28  Score=233.75  Aligned_cols=243  Identities=15%  Similarity=0.207  Sum_probs=184.4

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      .++..+.||.+.|.+++|+|....+|+|||.|++|+|||+.++....                 .               
T Consensus        65 ~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~-----------------~---------------  112 (568)
T PTZ00420         65 PPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESV-----------------K---------------  112 (568)
T ss_pred             ceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccc-----------------c---------------
Confidence            56788999999999999999855899999999999999997632000                 0               


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                                                            ........+.+|...|.+++|+|++..+|++++.|++|+|||
T Consensus       113 --------------------------------------~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWD  154 (568)
T PTZ00420        113 --------------------------------------EIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWD  154 (568)
T ss_pred             --------------------------------------ccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEE
Confidence                                                  000012245689999999999998866778999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEE-----EEcCC
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSA-----SWNWD  269 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~-----~~~~~  269 (490)
                      +++++....+.        |...|.+++|+|+|. +|++++.|+.|+|||+++++.+.++.+|.+.+...     .|+++
T Consensus       155 l~tg~~~~~i~--------~~~~V~SlswspdG~-lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d  225 (568)
T PTZ00420        155 IENEKRAFQIN--------MPKKLSSLKWNIKGN-LLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGD  225 (568)
T ss_pred             CCCCcEEEEEe--------cCCcEEEEEECCCCC-EEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCC
Confidence            99887544322        567899999999995 89999999999999999999999999998765433     34588


Q ss_pred             CCEEEEEeCCC----eEEEEeCCC-CceeeeeeecCCCce-eEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEE
Q psy17682        270 GSKLLTTCKDK----KMRIINPRT-GAIEEEAVCHEGSKA-TRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMV  343 (490)
Q Consensus       270 ~~~l~~~~~dg----~i~iwd~~~-~~~~~~~~~~~~~~~-~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~  343 (490)
                      +.+|++++.|+    +|+|||++. .+++.....+..... ......++|.++++|.   .|+.|++|++.... ...+.
T Consensus       226 ~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGk---GD~tIr~~e~~~~~-~~~l~  301 (568)
T PTZ00420        226 DNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGK---GDGNCRYYQHSLGS-IRKVN  301 (568)
T ss_pred             CCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEE---CCCeEEEEEccCCc-EEeec
Confidence            89999988774    799999995 556655543332212 2233345588898887   69999999998653 22333


Q ss_pred             eccCCCceeeeeecCCC
Q psy17682        344 ELDTSNGVMFPLYDPDT  360 (490)
Q Consensus       344 ~~~~~~~i~~~~~s~~~  360 (490)
                      ...+..+...++|.|..
T Consensus       302 ~~~s~~p~~g~~f~Pkr  318 (568)
T PTZ00420        302 EYKSCSPFRSFGFLPKQ  318 (568)
T ss_pred             ccccCCCccceEEcccc
Confidence            44455667889999975

>KOG0313|consensus

Probab=99.96  E-value=5.6e-28  Score=210.25  Aligned_cols=264  Identities=17%  Similarity=0.304  Sum_probs=212.8

Q ss_pred             CCCCCcEEecccccceeeeEEeccCCC--ceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCc
Q psy17682         31 RTLTEPVVDLLYHQRRVGLVLWHPTAQ--NVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGAN  108 (490)
Q Consensus        31 ~~~~~~~~~l~gH~~~V~~v~~~p~~~--~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (490)
                      ...-+..+.+.||.++|..++|.-.++  ..|+++|.|.++++|.++.+....                           
T Consensus       131 d~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~---------------------------  183 (423)
T KOG0313|consen  131 DLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKV---------------------------  183 (423)
T ss_pred             ecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhh---------------------------
Confidence            345677888999999999999866542  359999999999999887754110                           


Q ss_pred             ccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC
Q psy17682        109 RNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC  188 (490)
Q Consensus       109 ~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg  188 (490)
                                                                     .....-+||+..|.+++..++| .++++|+.|.
T Consensus       184 -----------------------------------------------~~~~~~~GHk~~V~sVsv~~sg-tr~~SgS~D~  215 (423)
T KOG0313|consen  184 -----------------------------------------------KALKVCRGHKRSVDSVSVDSSG-TRFCSGSWDT  215 (423)
T ss_pred             -----------------------------------------------hHHhHhcccccceeEEEecCCC-CeEEeecccc
Confidence                                                           0111224999999999999998 8999999999


Q ss_pred             cEEEEECCCCC------------------cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee
Q psy17682        189 VVKVWQIPDGG------------------ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI  250 (490)
Q Consensus       189 ~i~iwd~~~~~------------------~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~  250 (490)
                      +|+||+..+..                  ....-..|...+.+|..+|.++.|++.+  .+++++.|.+|+.||+.++..
T Consensus       216 ~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~--v~yS~SwDHTIk~WDletg~~  293 (423)
T KOG0313|consen  216 MLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDAT--VIYSVSWDHTIKVWDLETGGL  293 (423)
T ss_pred             eeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCCC--ceEeecccceEEEEEeecccc
Confidence            99999932110                  0111236788899999999999999854  799999999999999999999


Q ss_pred             EEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc---eeeeeeecCCCceeEEEEeCCCc-EEEEEeCCCcee
Q psy17682        251 MIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGA---IEEEAVCHEGSKATRAIYLKSGL-IFTTGFSKMSER  326 (490)
Q Consensus       251 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~s~~~~-~l~~~~~~~~~~  326 (490)
                      +.++.+ ...++++..+|..++|++|+.|..+++||.|++.   ...++.+|.+. +..+.|+|... .|++|+   .|+
T Consensus       294 ~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nw-Vssvkwsp~~~~~~~S~S---~D~  368 (423)
T KOG0313|consen  294 KSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNW-VSSVKWSPTNEFQLVSGS---YDN  368 (423)
T ss_pred             eeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhh-hhheecCCCCceEEEEEe---cCC
Confidence            988884 5679999999999999999999999999999864   45667799985 99999999854 667777   799


Q ss_pred             EEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        327 QYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       327 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      ++++||+++...++... ..|...|.++.|+. +.++ ++|+.|.+|+|+.-.
T Consensus       369 t~klWDvRS~k~plydI-~~h~DKvl~vdW~~-~~~I-vSGGaD~~l~i~~~~  418 (423)
T KOG0313|consen  369 TVKLWDVRSTKAPLYDI-AGHNDKVLSVDWNE-GGLI-VSGGADNKLRIFKGS  418 (423)
T ss_pred             eEEEEEeccCCCcceee-ccCCceEEEEeccC-CceE-EeccCcceEEEeccc
Confidence            99999999876554433 35677899999975 4455 899999999998754

>KOG0278|consensus

Probab=99.96  E-value=3.5e-29  Score=205.90  Aligned_cols=253  Identities=17%  Similarity=0.179  Sum_probs=214.9

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      ..=+-++.||.+.|.....+.+. ...+|++.|=+.++||.-+|.-                                  
T Consensus        49 gdwigtfeghkgavw~~~l~~na-~~aasaaadftakvw~a~tgde----------------------------------   93 (334)
T KOG0278|consen   49 GDWIGTFEGHKGAVWSATLNKNA-TRAASAAADFTAKVWDAVTGDE----------------------------------   93 (334)
T ss_pred             CCcEEeeeccCcceeeeecCchh-hhhhhhcccchhhhhhhhhhhh----------------------------------
Confidence            34456899999999999999887 8899999999999999877540                                  


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                                                                  +.. -.|+.-|.+++|+.|. ++|++|+.+..+|||
T Consensus        94 --------------------------------------------lhs-f~hkhivk~~af~~ds-~~lltgg~ekllrvf  127 (334)
T KOG0278|consen   94 --------------------------------------------LHS-FEHKHIVKAVAFSQDS-NYLLTGGQEKLLRVF  127 (334)
T ss_pred             --------------------------------------------hhh-hhhhheeeeEEecccc-hhhhccchHHHhhhh
Confidence                                                        001 1588899999999987 899999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  273 (490)
                      |++..+      .|...+.+|.+.|..+.|.... +.++++..|++||+||.++++.++++. ...+|+++.++++|++|
T Consensus       128 dln~p~------App~E~~ghtg~Ir~v~wc~eD-~~iLSSadd~tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~il  199 (334)
T KOG0278|consen  128 DLNRPK------APPKEISGHTGGIRTVLWCHED-KCILSSADDKTVRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRIL  199 (334)
T ss_pred             hccCCC------CCchhhcCCCCcceeEEEeccC-ceEEeeccCCceEEEEeccCcEEEEEe-cCCCCcceeeccCCCEE
Confidence            986544      3344577899999999999887 488888999999999999999999998 57889999999999876


Q ss_pred             EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceee
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMF  353 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~  353 (490)
                      .++ ..+.|.+||..+-.+++.+..+-.  +.+...+|+...+++|+   .|..++.||..++...... ..+|.++|.+
T Consensus       200 Tia-~gssV~Fwdaksf~~lKs~k~P~n--V~SASL~P~k~~fVaGg---ed~~~~kfDy~TgeEi~~~-nkgh~gpVhc  272 (334)
T KOG0278|consen  200 TIA-YGSSVKFWDAKSFGLLKSYKMPCN--VESASLHPKKEFFVAGG---EDFKVYKFDYNTGEEIGSY-NKGHFGPVHC  272 (334)
T ss_pred             EEe-cCceeEEeccccccceeeccCccc--cccccccCCCceEEecC---cceEEEEEeccCCceeeec-ccCCCCceEE
Confidence            665 458899999999999888875543  88999999999999988   7999999999998765543 3467889999


Q ss_pred             eeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682        354 PLYDPDTNLVYLCGKGDSVIRYFEITAEPP  383 (490)
Q Consensus       354 ~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~  383 (490)
                      +.|+|+|... ++|+.||+|++|.+..++.
T Consensus       273 VrFSPdGE~y-AsGSEDGTirlWQt~~~~~  301 (334)
T KOG0278|consen  273 VRFSPDGELY-ASGSEDGTIRLWQTTPGKT  301 (334)
T ss_pred             EEECCCCcee-eccCCCceEEEEEecCCCc
Confidence            9999999886 9999999999999988763

>KOG0282|consensus

Probab=99.96  E-value=1.8e-29  Score=226.03  Aligned_cols=254  Identities=17%  Similarity=0.233  Sum_probs=208.3

Q ss_pred             CcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCC-CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe
Q psy17682        157 DHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPD-GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG  235 (490)
Q Consensus       157 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~  235 (490)
                      .+.++.||+..|+++.|.|....+|++++.|+.|+||++-. ++++++       +.+|..+|..++|+++|. .|++++
T Consensus       206 ~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrt-------f~gH~k~Vrd~~~s~~g~-~fLS~s  277 (503)
T KOG0282|consen  206 LSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRT-------FKGHRKPVRDASFNNCGT-SFLSAS  277 (503)
T ss_pred             heeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehh-------hhcchhhhhhhhccccCC-eeeeee
Confidence            46678999999999999995448999999999999999876 666665       557999999999999996 899999


Q ss_pred             CCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc
Q psy17682        236 SDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG-SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL  314 (490)
Q Consensus       236 ~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~  314 (490)
                      .|+.|++||.++|+++..+. ....++|+.|+|++ +.+++|+.|+.|+.||+|+++.++++..|-+. +..+.|-++|+
T Consensus       278 fD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~-i~~i~F~~~g~  355 (503)
T KOG0282|consen  278 FDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGA-ILDITFVDEGR  355 (503)
T ss_pred             cceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhh-eeeeEEccCCc
Confidence            99999999999999999998 46678999999988 89999999999999999999999999888876 99999999999


Q ss_pred             EEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe--eEEeeeee
Q psy17682        315 IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF--VHYINTFQ  392 (490)
Q Consensus       315 ~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~--~~~~~~~~  392 (490)
                      .+++.+   .++.++||+.+..-... ...........++..+|+++++ ++-+.|+.|.+|.+...-+.  .+....+.
T Consensus       356 rFissS---Ddks~riWe~~~~v~ik-~i~~~~~hsmP~~~~~P~~~~~-~aQs~dN~i~ifs~~~~~r~nkkK~feGh~  430 (503)
T KOG0282|consen  356 RFISSS---DDKSVRIWENRIPVPIK-NIADPEMHTMPCLTLHPNGKWF-AAQSMDNYIAIFSTVPPFRLNKKKRFEGHS  430 (503)
T ss_pred             eEeeec---cCccEEEEEcCCCccch-hhcchhhccCcceecCCCCCee-hhhccCceEEEEecccccccCHhhhhccee
Confidence            999998   57899999988654322 2222233446778889999998 77889999999997653211  11223333


Q ss_pred             CCCceeeEEEeeCceeEEeecce--eEEEEecCCC
Q psy17682        393 TPDPQRGIGMMPKRGCDVNSCEI--GRFFRLNNSG  425 (490)
Q Consensus       393 ~~~~i~~~~~sp~~~~l~~~~~~--~~~~~~~~~~  425 (490)
                      ..+.-..+.|||||.+|++|++.  +.+|+..+.+
T Consensus       431 vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~k  465 (503)
T KOG0282|consen  431 VAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTK  465 (503)
T ss_pred             ccCceeeEEEcCCCCeEEeecCCccEEEeechhhh
Confidence            44567889999999999999764  4556665544

>KOG1408|consensus

Probab=99.96  E-value=3.1e-28  Score=227.51  Aligned_cols=348  Identities=16%  Similarity=0.196  Sum_probs=257.9

Q ss_pred             CCCCccCCccccchh---hHhhhee---eeeeeccCCCCCcEE--ecccccceeeeEEeccCC----------CceEEee
Q psy17682          2 LYPDTVGDTAALTAD---EWFAVLF---RLTYFSPRTLTEPVV--DLLYHQRRVGLVLWHPTA----------QNVLLTA   63 (490)
Q Consensus         2 ~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~--~l~gH~~~V~~v~~~p~~----------~~~l~s~   63 (490)
                      -|||.+    |++++   +|.+++|   .+..|+-++.++.-.  .+..|...|+.|+--|.+          +..++||
T Consensus       323 ~fPD~I----A~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TC  398 (1080)
T KOG1408|consen  323 IFPDAI----ACQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTC  398 (1080)
T ss_pred             cCCcee----EEEecCCCceEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEe
Confidence            489999    88888   6788888   488999988777655  477899999999987732          2579999


Q ss_pred             eCCCeEEEEeCCCCCCCCC----CCccccceecccc---ceeeccc-------CCCCCcccccCCeeEeccccccceEEE
Q psy17682         64 GKEAEPILISLKDGYIPPS----EKSKSALKVTKRS---NVLDKVG-------GKGGANRNSTANEITISEDYVKEFKEE  129 (490)
Q Consensus        64 ~~D~~v~iWd~~~~~~~~~----~~~~~~~~~~~~~---~~~~~~~-------~~~~~~~~~~v~~~~~s~~~~~~~~~~  129 (490)
                      +.|++||+|++..+.....    .-.....++....   ..+...+       ..........++++++||++     ..
T Consensus       399 SsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~g-----qh  473 (1080)
T KOG1408|consen  399 SSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDG-----QH  473 (1080)
T ss_pred             cCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCc-----ce
Confidence            9999999999986321000    0000001111110   0000000       00112223468899999995     67


Q ss_pred             EEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCC--CCCEEEEEeCCCcEEEEECCCCCcccccccc
Q psy17682        130 IRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPH--DDNVIASGSEDCVVKVWQIPDGGISRTLTEP  207 (490)
Q Consensus       130 ~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  207 (490)
                      ++++...|.++||++.        .......+..|+..|.|+.|+.-  +..+||+++.|.-|.+||+...-.      +
T Consensus       474 LAsGDr~GnlrVy~Lq--------~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~------l  539 (1080)
T KOG1408|consen  474 LASGDRGGNLRVYDLQ--------ELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYD------L  539 (1080)
T ss_pred             ecccCccCceEEEEeh--------hhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccc------h
Confidence            8899999999999996        12234467899999999999852  336899999999999999864432      2


Q ss_pred             eeeecccccCEEEEEEeeCC-CCEEEEEeCCCcEEEEECCC-CeeEEEEe-----cCCCcEEEEEEcCCCCEEEEEeCCC
Q psy17682        208 VVDLLYHQRRVGLVLWHPTA-QNVLLTAGSDNNVAIWNVGT-GEIMIQIE-----CHPDIVYSASWNWDGSKLLTTCKDK  280 (490)
Q Consensus       208 ~~~~~~~~~~v~~~~~~p~~-~~~l~s~~~dg~v~iwd~~~-~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~dg  280 (490)
                      ..++.+|...|+++.|.-.| ...+++++.|..|.+ +... ......+.     .....++.|+..|..+++++++.|+
T Consensus       540 ~qtld~HSssITsvKFa~~gln~~MiscGADksimF-r~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDr  618 (1080)
T KOG1408|consen  540 VQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMF-RVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDR  618 (1080)
T ss_pred             hhhhcccccceeEEEEeecCCceEEEeccCchhhhe-ehhccccCceeccccccccccceEEEeeeCCCcceEEEEeccc
Confidence            33467799999999998876 236889999987754 4322 11111122     2245689999999999999999999


Q ss_pred             eEEEEeCCCCceeeeeee---cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeec
Q psy17682        281 KMRIINPRTGAIEEEAVC---HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYD  357 (490)
Q Consensus       281 ~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s  357 (490)
                      .|+|||+.+++..+.+++   |.+. ...+...|.|.++++.+   .|.++.++|..++++..  ...+|...|+.+.|.
T Consensus       619 nirif~i~sgKq~k~FKgs~~~eG~-lIKv~lDPSgiY~atSc---sdktl~~~Df~sgEcvA--~m~GHsE~VTG~kF~  692 (1080)
T KOG1408|consen  619 NIRIFDIESGKQVKSFKGSRDHEGD-LIKVILDPSGIYLATSC---SDKTLCFVDFVSGECVA--QMTGHSEAVTGVKFL  692 (1080)
T ss_pred             ceEEEeccccceeeeecccccCCCc-eEEEEECCCccEEEEee---cCCceEEEEeccchhhh--hhcCcchheeeeeec
Confidence            999999999999999984   4344 77888999999999998   79999999999988643  344788889999999


Q ss_pred             CCCCeEEEEecCCCeEEEEEecC
Q psy17682        358 PDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       358 ~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      +|-++| ++.+.||.|.||.+..
T Consensus       693 nDCkHl-ISvsgDgCIFvW~lp~  714 (1080)
T KOG1408|consen  693 NDCKHL-ISVSGDGCIFVWKLPL  714 (1080)
T ss_pred             ccchhh-eeecCCceEEEEECch
Confidence            999999 7888999999999864

>KOG0300|consensus

Probab=99.96  E-value=3.1e-28  Score=207.00  Aligned_cols=302  Identities=17%  Similarity=0.207  Sum_probs=238.7

Q ss_pred             CCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682         33 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST  112 (490)
Q Consensus        33 ~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (490)
                      .-..+..+.||.+.|..++-.... .++.|++.|.+.+||.++++.                                  
T Consensus       137 ~~~lvre~~GHkDGiW~Vaa~~tq-pi~gtASADhTA~iWs~Esg~----------------------------------  181 (481)
T KOG0300|consen  137 KFRLVRELEGHKDGIWHVAADSTQ-PICGTASADHTARIWSLESGA----------------------------------  181 (481)
T ss_pred             eEeehhhhcccccceeeehhhcCC-cceeecccccceeEEeecccc----------------------------------
Confidence            345566799999999999988777 699999999999999998865                                  


Q ss_pred             CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEE
Q psy17682        113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKV  192 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~i  192 (490)
                                                                  ++..+.||.+.|++++|++.+ .++++++.|++..|
T Consensus       182 --------------------------------------------CL~~Y~GH~GSVNsikfh~s~-~L~lTaSGD~taHI  216 (481)
T KOG0300|consen  182 --------------------------------------------CLATYTGHTGSVNSIKFHNSG-LLLLTASGDETAHI  216 (481)
T ss_pred             --------------------------------------------ceeeecccccceeeEEecccc-ceEEEccCCcchHH
Confidence                                                        222467999999999999987 89999999999999


Q ss_pred             EEC------CCC---------------------------CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCc
Q psy17682        193 WQI------PDG---------------------------GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNN  239 (490)
Q Consensus       193 wd~------~~~---------------------------~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~  239 (490)
                      |..      ...                           ..-..+..|...+.+|...|.+..|...|+ .+++++.|.+
T Consensus       217 W~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~-Q~vTaSWDRT  295 (481)
T KOG0300|consen  217 WKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQ-QMVTASWDRT  295 (481)
T ss_pred             HHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcc-eeeeeecccc
Confidence            962      110                           001234467888999999999999999886 8999999999


Q ss_pred             EEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-ceeeeeeecCCCceeEEEEeCCCcEEEE
Q psy17682        240 VAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTG-AIEEEAVCHEGSKATRAIYLKSGLIFTT  318 (490)
Q Consensus       240 v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~  318 (490)
                      ..+||+++++++..+.+|....+.++-+|..+++++.+.|.+.++||++.. ..+..+.+|... ++++.|..+.+. ++
T Consensus       296 AnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdt-VTS~vF~~dd~v-VS  373 (481)
T KOG0300|consen  296 ANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDT-VTSVVFNTDDRV-VS  373 (481)
T ss_pred             ceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccc-eeEEEEecCCce-ee
Confidence            999999999999999999999999999999999999999999999999954 456678899886 999999887764 56


Q ss_pred             EeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEe-eeeeCCCce
Q psy17682        319 GFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI-NTFQTPDPQ  397 (490)
Q Consensus       319 ~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~i  397 (490)
                      |+   .|.+|++||+++...++....  ..++++.++.+..+..+ +.--.+..|++||++......-+. ....|...|
T Consensus       374 gS---DDrTvKvWdLrNMRsplATIR--tdS~~NRvavs~g~~iI-AiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV  447 (481)
T KOG0300|consen  374 GS---DDRTVKVWDLRNMRSPLATIR--TDSPANRVAVSKGHPII-AIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMV  447 (481)
T ss_pred             cC---CCceEEEeeeccccCcceeee--cCCccceeEeecCCceE-EeccCCceEEEEecCCCccccCCcccccccceee
Confidence            66   589999999999888766554  44678888888877776 667778899999998765211111 223355679


Q ss_pred             eeEEEeeCc---eeEEee-cceeEEEEecC
Q psy17682        398 RGIGMMPKR---GCDVNS-CEIGRFFRLNN  423 (490)
Q Consensus       398 ~~~~~sp~~---~~l~~~-~~~~~~~~~~~  423 (490)
                      .+++|..+.   .++.+| +..+--|++..
T Consensus       448 ~c~AW~eehp~cnLftcGFDR~v~gW~in~  477 (481)
T KOG0300|consen  448 TCCAWLEEHPACNLFTCGFDRMVAGWKINT  477 (481)
T ss_pred             eeeeccccCcccccccccccceeeeeEecc
Confidence            999998654   334444 22444465543

>KOG0289|consensus

Probab=99.96  E-value=2.8e-27  Score=209.21  Aligned_cols=239  Identities=16%  Similarity=0.203  Sum_probs=193.7

Q ss_pred             ceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC
Q psy17682        159 ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN  238 (490)
Q Consensus       159 ~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg  238 (490)
                      .++.||...|+.+.|+|+. ..+++++.|..|++|..........       ...|..+|+.+..+|.|+ +|++++.|+
T Consensus       255 ~~~~Gh~kki~~v~~~~~~-~~v~~aSad~~i~vws~~~~s~~~~-------~~~h~~~V~~ls~h~tge-YllsAs~d~  325 (506)
T KOG0289|consen  255 ATLKGHTKKITSVKFHKDL-DTVITASADEIIRVWSVPLSSEPTS-------SRPHEEPVTGLSLHPTGE-YLLSASNDG  325 (506)
T ss_pred             hhccCcceEEEEEEeccch-hheeecCCcceEEeeccccccCccc-------cccccccceeeeeccCCc-EEEEecCCc
Confidence            3678999999999999987 7899999999999999876654333       344999999999999997 999999999


Q ss_pred             cEEEEECCCCeeEEEEec--CCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEE
Q psy17682        239 NVAIWNVGTGEIMIQIEC--HPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIF  316 (490)
Q Consensus       239 ~v~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  316 (490)
                      +..+.|++++..+.....  ..-.+++.+|+|||..|.+|..||.++|||+.++..+..|.+|.+. +..+.|+.+|.+|
T Consensus       326 ~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~-vk~i~FsENGY~L  404 (506)
T KOG0289|consen  326 TWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGP-VKAISFSENGYWL  404 (506)
T ss_pred             eEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCc-eeEEEeccCceEE
Confidence            999999999988776653  2345899999999999999999999999999999999999999886 9999999999999


Q ss_pred             EEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee-eCCC
Q psy17682        317 TTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF-QTPD  395 (490)
Q Consensus       317 ~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~-~~~~  395 (490)
                      ++++   .|+.|++||++.......+. .+...++.++.|.+.|.+| +.++.|=+|++++-.+.+  ...+..+ .+.+
T Consensus       405 at~a---dd~~V~lwDLRKl~n~kt~~-l~~~~~v~s~~fD~SGt~L-~~~g~~l~Vy~~~k~~k~--W~~~~~~~~~sg  477 (506)
T KOG0289|consen  405 ATAA---DDGSVKLWDLRKLKNFKTIQ-LDEKKEVNSLSFDQSGTYL-GIAGSDLQVYICKKKTKS--WTEIKELADHSG  477 (506)
T ss_pred             EEEe---cCCeEEEEEehhhcccceee-ccccccceeEEEcCCCCeE-EeecceeEEEEEeccccc--ceeeehhhhccc
Confidence            9999   57789999999876443333 3334479999999999999 556666455555433322  2233333 3445


Q ss_pred             ceeeEEEeeCceeEEeecc
Q psy17682        396 PQRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       396 ~i~~~~~sp~~~~l~~~~~  414 (490)
                      ..+++.|....+++++++-
T Consensus       478 ~st~v~Fg~~aq~l~s~sm  496 (506)
T KOG0289|consen  478 LSTGVRFGEHAQYLASTSM  496 (506)
T ss_pred             ccceeeecccceEEeeccc
Confidence            7899999999888877643

>KOG0275|consensus

Probab=99.96  E-value=4.8e-29  Score=212.52  Aligned_cols=252  Identities=17%  Similarity=0.262  Sum_probs=214.3

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccc-eeeecccccCEEEEEEeeCCCCEEEEEeCCCcEE
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEP-VVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVA  241 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~  241 (490)
                      |.+..+.|..|+||| ++|++|+.||.|.+|+..+|+..+.+... ...+..+...|.|+.|+.+.+ ++++|+.||.|+
T Consensus       211 g~KSh~EcA~FSPDg-qyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsE-MlAsGsqDGkIK  288 (508)
T KOG0275|consen  211 GQKSHVECARFSPDG-QYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSE-MLASGSQDGKIK  288 (508)
T ss_pred             ccccchhheeeCCCC-ceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHH-HhhccCcCCcEE
Confidence            667889999999999 89999999999999999999887665432 233556889999999999986 999999999999


Q ss_pred             EEECCCCeeEEEEe-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEe
Q psy17682        242 IWNVGTGEIMIQIE-CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       242 iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~  320 (490)
                      +|.+++|.+++.|. .|...|+++.|+.|+..+++++.|.++++--+.+|++++.+.+|.+. +..+.|.++|..+++++
T Consensus       289 vWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSy-vn~a~ft~dG~~iisaS  367 (508)
T KOG0275|consen  289 VWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSY-VNEATFTDDGHHIISAS  367 (508)
T ss_pred             EEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCcccc-ccceEEcCCCCeEEEec
Confidence            99999999999997 89999999999999999999999999999999999999999999986 99999999999999998


Q ss_pred             CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee----CCCc
Q psy17682        321 SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ----TPDP  396 (490)
Q Consensus       321 ~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~  396 (490)
                         .|++|++|+.++.++...+...+..-.|.++..-|.+..-++.+...++|+|.++...     .+..+.    .++.
T Consensus       368 ---sDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQ-----vVrsfsSGkREgGd  439 (508)
T KOG0275|consen  368 ---SDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQ-----VVRSFSSGKREGGD  439 (508)
T ss_pred             ---CCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccce-----EEeeeccCCccCCc
Confidence               7999999999999988777776766778888887866544467778889999988754     333333    2345


Q ss_pred             eeeEEEeeCceeEEeecceeEEEE--ecCCC
Q psy17682        397 QRGIGMMPKRGCDVNSCEIGRFFR--LNNSG  425 (490)
Q Consensus       397 i~~~~~sp~~~~l~~~~~~~~~~~--~~~~~  425 (490)
                      ..+.+.||.|.++.+.+++..+|.  +.+++
T Consensus       440 Fi~~~lSpkGewiYcigED~vlYCF~~~sG~  470 (508)
T KOG0275|consen  440 FINAILSPKGEWIYCIGEDGVLYCFSVLSGK  470 (508)
T ss_pred             eEEEEecCCCcEEEEEccCcEEEEEEeecCc
Confidence            677889999999888877555554  55666

>KOG0269|consensus

Probab=99.96  E-value=3.7e-28  Score=229.27  Aligned_cols=302  Identities=13%  Similarity=0.169  Sum_probs=233.5

Q ss_pred             eeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccc
Q psy17682         46 RVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKE  125 (490)
Q Consensus        46 ~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~  125 (490)
                      ..+.|.-+++- ..++.+|. ..++|+.........              ....  ......+.......+.|..-    
T Consensus        41 ~~nAIs~nr~~-~qiv~AGr-s~lklyai~~~~~~~--------------~~~~--~~k~kqn~~~S~~DVkW~~~----   98 (839)
T KOG0269|consen   41 KANAISVNRDI-NQIVVAGR-SLLKLYAINPNDFSE--------------KCNH--RFKTKQNKFYSAADVKWGQL----   98 (839)
T ss_pred             ccceEeecCCc-ceeEEecc-cceeeEeeCcccCCc--------------ceee--ecccccceeeehhhcccccc----
Confidence            35556666776 66666666 566787766544222              1111  11223334446777888733    


Q ss_pred             eEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccc
Q psy17682        126 FKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLT  205 (490)
Q Consensus       126 ~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  205 (490)
                      +..+|++.+..|.|.+|++.    ..++ ++.+..+..|+..|.+++|++...++|++|+.||+|++||++..+....  
T Consensus        99 ~~NlIAT~s~nG~i~vWdln----k~~r-nk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t--  171 (839)
T KOG0269|consen   99 YSNLIATCSTNGVISVWDLN----KSIR-NKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKST--  171 (839)
T ss_pred             hhhhheeecCCCcEEEEecC----cccc-chhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccccc--
Confidence            46789999999999999997    3332 4456678899999999999999889999999999999999988766554  


Q ss_pred             cceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe-eEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Q psy17682        206 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE-IMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRI  284 (490)
Q Consensus       206 ~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  284 (490)
                           +.+....|+.++|+|...+.|+++...|.+.+||++... +...+..|.++|.|+.|+|++.+||+|+.|+.|+|
T Consensus       172 -----~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vki  246 (839)
T KOG0269|consen  172 -----FRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKI  246 (839)
T ss_pred             -----ccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEE
Confidence                 344778999999999988899999999999999998654 56677899999999999999999999999999999


Q ss_pred             EeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEE
Q psy17682        285 INPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVY  364 (490)
Q Consensus       285 wd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  364 (490)
                      ||..+.+.......+...++.++.|-|...+.++.+....|..|+|||++..-.|..... .|...++.++|......++
T Consensus       247 Wd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~-eH~~~vt~i~W~~~d~~~l  325 (839)
T KOG0269|consen  247 WDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFL-EHTDSVTGIAWDSGDRINL  325 (839)
T ss_pred             EeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeee-ccCccccceeccCCCceee
Confidence            999987766555566777899999999966554444445689999999998766665543 6777889999987556666


Q ss_pred             EEecCCCeEEEEEecCCC
Q psy17682        365 LCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       365 ~~g~~dg~i~iwd~~~~~  382 (490)
                      .+++.||+|..-.+++..
T Consensus       326 ~s~sKD~tv~qh~~knat  343 (839)
T KOG0269|consen  326 WSCSKDGTVLQHLFKNAT  343 (839)
T ss_pred             EeecCccHHHHhhhhccc
Confidence            899999998776666554

>KOG0289|consensus

Probab=99.96  E-value=1.4e-27  Score=211.15  Aligned_cols=258  Identities=16%  Similarity=0.171  Sum_probs=213.1

Q ss_pred             CCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccc
Q psy17682         31 RTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRN  110 (490)
Q Consensus        31 ~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (490)
                      .+.+..+..|.||+..|+.+.|+|+. ..+++++.|-.|+||......                                
T Consensus       248 ~~s~q~l~~~~Gh~kki~~v~~~~~~-~~v~~aSad~~i~vws~~~~s--------------------------------  294 (506)
T KOG0289|consen  248 KPSNQILATLKGHTKKITSVKFHKDL-DTVITASADEIIRVWSVPLSS--------------------------------  294 (506)
T ss_pred             cchhhhhhhccCcceEEEEEEeccch-hheeecCCcceEEeecccccc--------------------------------
Confidence            34567788899999999999999998 899999999999999765422                                


Q ss_pred             ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcE
Q psy17682        111 STANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVV  190 (490)
Q Consensus       111 ~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i  190 (490)
                                                                    .......|..+|+.+..+|.| .||++++.||+.
T Consensus       295 ----------------------------------------------~~~~~~~h~~~V~~ls~h~tg-eYllsAs~d~~w  327 (506)
T KOG0289|consen  295 ----------------------------------------------EPTSSRPHEEPVTGLSLHPTG-EYLLSASNDGTW  327 (506)
T ss_pred             ----------------------------------------------CccccccccccceeeeeccCC-cEEEEecCCceE
Confidence                                                          011235799999999999998 899999999999


Q ss_pred             EEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC
Q psy17682        191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG  270 (490)
Q Consensus       191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~  270 (490)
                      .+.|++++..+.....     ....-.+++.+|+||| .+|.+|..|+.|+|||+.++..+..|.+|.++|..++|+.+|
T Consensus       328 ~Fsd~~~g~~lt~vs~-----~~s~v~~ts~~fHpDg-Lifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENG  401 (506)
T KOG0289|consen  328 AFSDISSGSQLTVVSD-----ETSDVEYTSAAFHPDG-LIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENG  401 (506)
T ss_pred             EEEEccCCcEEEEEee-----ccccceeEEeeEcCCc-eEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCc
Confidence            9999999987654321     1123458999999999 599999999999999999999999999999999999999999


Q ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCc
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNG  350 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~  350 (490)
                      .+|++++.|+.|++||+|..+...++.......+..+.|.+.|.+|+.++   .+-.|++++-.+..-........|.+.
T Consensus       402 Y~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g---~~l~Vy~~~k~~k~W~~~~~~~~~sg~  478 (506)
T KOG0289|consen  402 YWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAG---SDLQVYICKKKTKSWTEIKELADHSGL  478 (506)
T ss_pred             eEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeec---ceeEEEEEecccccceeeehhhhcccc
Confidence            99999999999999999999888888766655699999999999999886   677777776554332222222344456


Q ss_pred             eeeeeecCCCCeEEEEecCCCeEEEEEe
Q psy17682        351 VMFPLYDPDTNLVYLCGKGDSVIRYFEI  378 (490)
Q Consensus       351 i~~~~~s~~~~~l~~~g~~dg~i~iwd~  378 (490)
                      .+.+.|....+++ ++++.|..++++.+
T Consensus       479 st~v~Fg~~aq~l-~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  479 STGVRFGEHAQYL-ASTSMDAILRLYAL  505 (506)
T ss_pred             cceeeecccceEE-eeccchhheEEeec
Confidence            7889999999998 78999999888764

>KOG0274|consensus

Probab=99.96  E-value=1.2e-27  Score=231.82  Aligned_cols=255  Identities=18%  Similarity=0.244  Sum_probs=212.5

Q ss_pred             eeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCC
Q psy17682         27 YFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGG  106 (490)
Q Consensus        27 ~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (490)
                      .|+..+.-.....|.||.+.|.++++.. +.+.|++|+.|.++++||..++.                            
T Consensus       232 ~~~~~~~~~i~~~l~GH~g~V~~l~~~~-~~~~lvsgS~D~t~rvWd~~sg~----------------------------  282 (537)
T KOG0274|consen  232 LWDLNNGYLILTRLVGHFGGVWGLAFPS-GGDKLVSGSTDKTERVWDCSTGE----------------------------  282 (537)
T ss_pred             EeecccceEEEeeccCCCCCceeEEEec-CCCEEEEEecCCcEEeEecCCCc----------------------------
Confidence            4444444445555999999999999987 44999999999999999988765                            


Q ss_pred             CcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeC
Q psy17682        107 ANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSE  186 (490)
Q Consensus       107 ~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~  186 (490)
                                                                        +..++.||.+.|.++...+   .++++|+.
T Consensus       283 --------------------------------------------------C~~~l~gh~stv~~~~~~~---~~~~sgs~  309 (537)
T KOG0274|consen  283 --------------------------------------------------CTHSLQGHTSSVRCLTIDP---FLLVSGSR  309 (537)
T ss_pred             --------------------------------------------------EEEEecCCCceEEEEEccC---ceEeeccC
Confidence                                                              2335679999999999874   68999999


Q ss_pred             CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEE
Q psy17682        187 DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASW  266 (490)
Q Consensus       187 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~  266 (490)
                      |.+|++|+++++..+..       +.+|..+|.++..+  + .++++|+.|++|++||+.+++++..+.+|...|.++.+
T Consensus       310 D~tVkVW~v~n~~~l~l-------~~~h~~~V~~v~~~--~-~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~  379 (537)
T KOG0274|consen  310 DNTVKVWDVTNGACLNL-------LRGHTGPVNCVQLD--E-PLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIV  379 (537)
T ss_pred             CceEEEEeccCcceEEE-------eccccccEEEEEec--C-CEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEe
Confidence            99999999998887765       44599999999998  4 48999999999999999999999999999999999988


Q ss_pred             cCCCCEEEEEeCCCeEEEEeCCCC-ceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec
Q psy17682        267 NWDGSKLLTTCKDKKMRIINPRTG-AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL  345 (490)
Q Consensus       267 ~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~  345 (490)
                      .+. ..+++|+.|++|++||+++. +++.++.+|... +.  .....+++|++++   .|+.|++||...+++.......
T Consensus       380 ~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~-v~--~l~~~~~~Lvs~~---aD~~Ik~WD~~~~~~~~~~~~~  452 (537)
T KOG0274|consen  380 DSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSL-VS--SLLLRDNFLVSSS---ADGTIKLWDAEEGECLRTLEGR  452 (537)
T ss_pred             cCc-ceEEeeeeccceEeecCCchhhhhhhhcCCccc-cc--ccccccceeEecc---ccccEEEeecccCceeeeeccC
Confidence            765 89999999999999999999 999999988874 43  3344578888888   7899999999988865555432


Q ss_pred             cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682        346 DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF  384 (490)
Q Consensus       346 ~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~  384 (490)
                       +..+|..+++.  ... +++++.||.+++||+++++..
T Consensus       453 -~~~~v~~l~~~--~~~-il~s~~~~~~~l~dl~~~~~~  487 (537)
T KOG0274|consen  453 -HVGGVSALALG--KEE-ILCSSDDGSVKLWDLRSGTLI  487 (537)
T ss_pred             -CcccEEEeecC--cce-EEEEecCCeeEEEecccCchh
Confidence             45678877766  233 478889999999999998744

>KOG0308|consensus

Probab=99.96  E-value=4.3e-28  Score=224.56  Aligned_cols=291  Identities=17%  Similarity=0.208  Sum_probs=231.3

Q ss_pred             cccceee---eEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEe
Q psy17682         42 YHQRRVG---LVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITI  118 (490)
Q Consensus        42 gH~~~V~---~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  118 (490)
                      .|...|+   .+..++.+.++|+|||.||.|++|+.....-..                                     
T Consensus        19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~-------------------------------------   61 (735)
T KOG0308|consen   19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEP-------------------------------------   61 (735)
T ss_pred             hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCc-------------------------------------
Confidence            5666666   666677666789999999999999887533100                                     


Q ss_pred             ccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC
Q psy17682        119 SEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG  198 (490)
Q Consensus       119 s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~  198 (490)
                                                         ..+....++.|.+.|+.+....++ +.|++++.|-+|++|+...+
T Consensus        62 -----------------------------------s~~~~asme~HsDWVNDiiL~~~~-~tlIS~SsDtTVK~W~~~~~  105 (735)
T KOG0308|consen   62 -----------------------------------STPYIASMEHHSDWVNDIILCGNG-KTLISASSDTTVKVWNAHKD  105 (735)
T ss_pred             -----------------------------------ccchhhhhhhhHhHHhhHHhhcCC-CceEEecCCceEEEeecccC
Confidence                                               000233567899999999999877 79999999999999998766


Q ss_pred             C--cccccccceeeecccccCEEEEEE-eeCCCCEEEEEeCCCcEEEEECCCCe--eE--------EEEe-cCCCcEEEE
Q psy17682        199 G--ISRTLTEPVVDLLYHQRRVGLVLW-HPTAQNVLLTAGSDNNVAIWNVGTGE--IM--------IQIE-CHPDIVYSA  264 (490)
Q Consensus       199 ~--~~~~~~~~~~~~~~~~~~v~~~~~-~p~~~~~l~s~~~dg~v~iwd~~~~~--~~--------~~~~-~~~~~v~~~  264 (490)
                      .  +...       +..|.+.|.|++. .++. .++|+||.|+.|.+||+.++.  .+        ..+. ++...|+++
T Consensus       106 ~~~c~st-------ir~H~DYVkcla~~ak~~-~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSL  177 (735)
T KOG0308|consen  106 NTFCMST-------IRTHKDYVKCLAYIAKNN-ELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSL  177 (735)
T ss_pred             cchhHhh-------hhcccchheeeeecccCc-eeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeee
Confidence            3  3333       4559999999999 6665 599999999999999999772  22        2233 788899999


Q ss_pred             EEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe
Q psy17682        265 SWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE  344 (490)
Q Consensus       265 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~  344 (490)
                      +.++.|..|++|+..+.+++||.++.+.+..+.+|... +..+..++||..+++++   +|++|++||+...++...+. 
T Consensus       178 A~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdN-Vr~ll~~dDGt~~ls~s---SDgtIrlWdLgqQrCl~T~~-  252 (735)
T KOG0308|consen  178 AMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDN-VRVLLVNDDGTRLLSAS---SDGTIRLWDLGQQRCLATYI-  252 (735)
T ss_pred             ecCCcceEEEecCcccceEEeccccccceeeeeccccc-eEEEEEcCCCCeEeecC---CCceEEeeeccccceeeeEE-
Confidence            99999999999999999999999999999999999987 99999999999999998   79999999999887765543 


Q ss_pred             ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEe--eCceeEEeecceeEEEEec
Q psy17682        345 LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMM--PKRGCDVNSCEIGRFFRLN  422 (490)
Q Consensus       345 ~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~s--p~~~~l~~~~~~~~~~~~~  422 (490)
                       -|..+|+++..+|+-.++ .+|+.||.|..=|+++...   ....+....||..+..+  .+..++.+.++.++-|.+.
T Consensus       253 -vH~e~VWaL~~~~sf~~v-YsG~rd~~i~~Tdl~n~~~---~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~  327 (735)
T KOG0308|consen  253 -VHKEGVWALQSSPSFTHV-YSGGRDGNIYRTDLRNPAK---STLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLE  327 (735)
T ss_pred             -eccCceEEEeeCCCcceE-EecCCCCcEEecccCCchh---heEeecCCCchhhhhhccccCCceeeeccccceecCCc
Confidence             466779999999999998 6899999999999998532   22223444577777666  3334666667777777765


Q ss_pred             C
Q psy17682        423 N  423 (490)
Q Consensus       423 ~  423 (490)
                      .
T Consensus       328 ~  328 (735)
T KOG0308|consen  328 P  328 (735)
T ss_pred             c
Confidence            4

>KOG0293|consensus

Probab=99.96  E-value=5.1e-28  Score=212.53  Aligned_cols=258  Identities=16%  Similarity=0.198  Sum_probs=207.3

Q ss_pred             CCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccc
Q psy17682         31 RTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRN  110 (490)
Q Consensus        31 ~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (490)
                      ..+-+...++.||..+|..+.|||++ ++|++||.|-.+++||..+|....                             
T Consensus       256 d~~~kl~~tlvgh~~~V~yi~wSPDd-ryLlaCg~~e~~~lwDv~tgd~~~-----------------------------  305 (519)
T KOG0293|consen  256 DVHFKLKKTLVGHSQPVSYIMWSPDD-RYLLACGFDEVLSLWDVDTGDLRH-----------------------------  305 (519)
T ss_pred             CcceeeeeeeecccCceEEEEECCCC-CeEEecCchHheeeccCCcchhhh-----------------------------
Confidence            34456688999999999999999999 999999999999999999876211                             


Q ss_pred             ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcE
Q psy17682        111 STANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVV  190 (490)
Q Consensus       111 ~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i  190 (490)
                                                    .|                  -.+|...+.+++|.||| ..+++|+.|++|
T Consensus       306 ------------------------------~y------------------~~~~~~S~~sc~W~pDg-~~~V~Gs~dr~i  336 (519)
T KOG0293|consen  306 ------------------------------LY------------------PSGLGFSVSSCAWCPDG-FRFVTGSPDRTI  336 (519)
T ss_pred             ------------------------------hc------------------ccCcCCCcceeEEccCC-ceeEecCCCCcE
Confidence                                          00                  02356789999999999 899999999999


Q ss_pred             EEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC
Q psy17682        191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG  270 (490)
Q Consensus       191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~  270 (490)
                      ..||++... ......      -....|.+++..+||+ .+++.+.|..|++++.++........ ...+|++++.|.++
T Consensus       337 ~~wdlDgn~-~~~W~g------vr~~~v~dlait~Dgk-~vl~v~~d~~i~l~~~e~~~dr~lis-e~~~its~~iS~d~  407 (519)
T KOG0293|consen  337 IMWDLDGNI-LGNWEG------VRDPKVHDLAITYDGK-YVLLVTVDKKIRLYNREARVDRGLIS-EEQPITSFSISKDG  407 (519)
T ss_pred             EEecCCcch-hhcccc------cccceeEEEEEcCCCc-EEEEEecccceeeechhhhhhhcccc-ccCceeEEEEcCCC
Confidence            999986443 232221      0335699999999996 77788899999999998766555444 45689999999999


Q ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCc-eeEEEEeC-CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSK-ATRAIYLK-SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS  348 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~s~-~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~  348 (490)
                      +++++.-.+..+++||+.....++.+.+|.... +..-+|-. +..++++|+   .|+.|+||+..++....  ...+|.
T Consensus       408 k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGS---ED~kvyIWhr~sgkll~--~LsGHs  482 (519)
T KOG0293|consen  408 KLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGS---EDSKVYIWHRISGKLLA--VLSGHS  482 (519)
T ss_pred             cEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecC---CCceEEEEEccCCceeE--eecCCc
Confidence            999999999999999999888888888876542 33444543 457889998   79999999999866322  223677


Q ss_pred             CceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      ..|++++|+|....++|+++.||+||||.....
T Consensus       483 ~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~~  515 (519)
T KOG0293|consen  483 KTVNCVSWNPADPEMFASASDDGTIRIWGPSDN  515 (519)
T ss_pred             ceeeEEecCCCCHHHhhccCCCCeEEEecCCcc
Confidence            889999999999999999999999999987643

>KOG0274|consensus

Probab=99.96  E-value=3.7e-27  Score=228.31  Aligned_cols=287  Identities=18%  Similarity=0.237  Sum_probs=229.2

Q ss_pred             Eeccc-ccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         38 VDLLY-HQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        38 ~~l~g-H~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      ..+.+ |...+.+..|+.   ..+++++.|++|++|+..++..                                     
T Consensus       201 ~~~~~~~~~~~~~~q~~~---~~~~~~s~~~tl~~~~~~~~~~-------------------------------------  240 (537)
T KOG0274|consen  201 KVLLGTDDHVVLCLQLHD---GFFKSGSDDSTLHLWDLNNGYL-------------------------------------  240 (537)
T ss_pred             eeecccCcchhhhheeec---CeEEecCCCceeEEeecccceE-------------------------------------
Confidence            33444 778899999983   6799999999999999887541                                     


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP  196 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~  196 (490)
                                                              ....+.||.+.|+++++.. ++.++++|+.|.++++||..
T Consensus       241 ----------------------------------------i~~~l~GH~g~V~~l~~~~-~~~~lvsgS~D~t~rvWd~~  279 (537)
T KOG0274|consen  241 ----------------------------------------ILTRLVGHFGGVWGLAFPS-GGDKLVSGSTDKTERVWDCS  279 (537)
T ss_pred             ----------------------------------------EEeeccCCCCCceeEEEec-CCCEEEEEecCCcEEeEecC
Confidence                                                    0012569999999999987 55899999999999999999


Q ss_pred             CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEE
Q psy17682        197 DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTT  276 (490)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  276 (490)
                      ++++...       +.+|.+.|.++...+   ..+++|+.|.+|++|++.++..+..+.+|.++|.++..+  +.++++|
T Consensus       280 sg~C~~~-------l~gh~stv~~~~~~~---~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsg  347 (537)
T KOG0274|consen  280 TGECTHS-------LQGHTSSVRCLTIDP---FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSG  347 (537)
T ss_pred             CCcEEEE-------ecCCCceEEEEEccC---ceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEE
Confidence            9998876       446999999998764   478899999999999999999999999999999999997  8899999


Q ss_pred             eCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC-CCCeEEEeccCCCceeeee
Q psy17682        277 CKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL-DEPIVMVELDTSNGVMFPL  355 (490)
Q Consensus       277 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~-~~~~~~~~~~~~~~i~~~~  355 (490)
                      +.|++|++||+.+++++.++.+|... +.++.+.+. ..+++|+   .|+.|++||+++. ++...+.  +|..-+..+ 
T Consensus       348 s~d~~v~VW~~~~~~cl~sl~gH~~~-V~sl~~~~~-~~~~Sgs---~D~~IkvWdl~~~~~c~~tl~--~h~~~v~~l-  419 (537)
T KOG0274|consen  348 SYDGTVKVWDPRTGKCLKSLSGHTGR-VYSLIVDSE-NRLLSGS---LDTTIKVWDLRTKRKCIHTLQ--GHTSLVSSL-  419 (537)
T ss_pred             ecCceEEEEEhhhceeeeeecCCcce-EEEEEecCc-ceEEeee---eccceEeecCCchhhhhhhhc--CCccccccc-
Confidence            99999999999999999999999886 898887766 7788888   7899999999988 5433322  333444444 


Q ss_pred             ecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-cceeEEEEecCCCceEEE
Q psy17682        356 YDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-CEIGRFFRLNNSGLCQVV  430 (490)
Q Consensus       356 ~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~~~~~~~~~~~~~i  430 (490)
                       ...+++| ++++.|+.|++||..+++.. +.+... +...|..+++. +..++.++ .+.+++|++.+++..+.+
T Consensus       420 -~~~~~~L-vs~~aD~~Ik~WD~~~~~~~-~~~~~~-~~~~v~~l~~~-~~~il~s~~~~~~~l~dl~~~~~~~~l  490 (537)
T KOG0274|consen  420 -LLRDNFL-VSSSADGTIKLWDAEEGECL-RTLEGR-HVGGVSALALG-KEEILCSSDDGSVKLWDLRSGTLIRTL  490 (537)
T ss_pred             -cccccee-EeccccccEEEeecccCcee-eeeccC-CcccEEEeecC-cceEEEEecCCeeEEEecccCchhhhh
Confidence             3456777 89999999999999999832 222221 23678888887 33444444 668899999998844433

>KOG1407|consensus

Probab=99.96  E-value=3.2e-27  Score=195.68  Aligned_cols=249  Identities=19%  Similarity=0.303  Sum_probs=200.5

Q ss_pred             ceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC
Q psy17682        159 ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN  238 (490)
Q Consensus       159 ~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg  238 (490)
                      +.+++|.+.|.+++|+.+| ..|++|+.|+++.+|+++..+......     ..+|.+.|-.++|+|..+.+|++++.|.
T Consensus        14 r~~~~~~~~v~Sv~wn~~g-~~lasgs~dktv~v~n~e~~r~~~~~~-----~~gh~~svdql~w~~~~~d~~atas~dk   87 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNCDG-TKLASGSFDKTVSVWNLERDRFRKELV-----YRGHTDSVDQLCWDPKHPDLFATASGDK   87 (313)
T ss_pred             HHhhhhhhcceEEEEcccC-ceeeecccCCceEEEEecchhhhhhhc-----ccCCCcchhhheeCCCCCcceEEecCCc
Confidence            4567999999999999998 899999999999999998775544433     6779999999999999888999999999


Q ss_pred             cEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEE
Q psy17682        239 NVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTT  318 (490)
Q Consensus       239 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~  318 (490)
                      +|++||++.++++.......+. .-+.|+|+|.++++++.|..|.+.|.++.+.....+...  .+..++|+.++.++..
T Consensus        88 ~ir~wd~r~~k~~~~i~~~~en-i~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~--e~ne~~w~~~nd~Ffl  164 (313)
T KOG1407|consen   88 TIRIWDIRSGKCTARIETKGEN-INITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKF--EVNEISWNNSNDLFFL  164 (313)
T ss_pred             eEEEEEeccCcEEEEeeccCcc-eEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccc--eeeeeeecCCCCEEEE
Confidence            9999999999999988854444 468899999999999999999999999988777665332  3777888877666554


Q ss_pred             EeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCcee
Q psy17682        319 GFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQR  398 (490)
Q Consensus       319 ~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~  398 (490)
                      ..   ..|.|.|......+....+.  .|.....++.|+|+|+++ |+|+.|-.+.+||+.+-- ..+.+..  ..-||+
T Consensus       165 t~---GlG~v~ILsypsLkpv~si~--AH~snCicI~f~p~Gryf-A~GsADAlvSLWD~~ELi-C~R~isR--ldwpVR  235 (313)
T KOG1407|consen  165 TN---GLGCVEILSYPSLKPVQSIK--AHPSNCICIEFDPDGRYF-ATGSADALVSLWDVDELI-CERCISR--LDWPVR  235 (313)
T ss_pred             ec---CCceEEEEeccccccccccc--cCCcceEEEEECCCCceE-eeccccceeeccChhHhh-hheeecc--ccCceE
Confidence            44   36889998777655433333  466788999999999998 899999999999998854 2233433  345899


Q ss_pred             eEEEeeCceeEEeecce--eEEEEecCCC
Q psy17682        399 GIGMMPKRGCDVNSCEI--GRFFRLNNSG  425 (490)
Q Consensus       399 ~~~~sp~~~~l~~~~~~--~~~~~~~~~~  425 (490)
                      .+.||-||++|++++++  +-+-.+.++.
T Consensus       236 TlSFS~dg~~lASaSEDh~IDIA~vetGd  264 (313)
T KOG1407|consen  236 TLSFSHDGRMLASASEDHFIDIAEVETGD  264 (313)
T ss_pred             EEEeccCcceeeccCccceEEeEecccCC
Confidence            99999999999999874  3334444554

>KOG0647|consensus

Probab=99.96  E-value=1.3e-26  Score=196.06  Aligned_cols=285  Identities=15%  Similarity=0.247  Sum_probs=216.5

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCC-CCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDG-YIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST  112 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (490)
                      ++-...-..-.+.|.+++|||....+++.+|-|++||+|+++.. ....                               
T Consensus        17 ~kd~ev~~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~-------------------------------   65 (347)
T KOG0647|consen   17 NKDYEVPNPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVP-------------------------------   65 (347)
T ss_pred             ccceecCCCcccchheeEeccccCceEEecccCCceEEEEEecCCcccc-------------------------------
Confidence            33344445567899999999976577778888999999998763 2000                               


Q ss_pred             CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEE
Q psy17682        113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKV  192 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~i  192 (490)
                                                                    +....|.++|.+++|+.+| ..+++|+.|+.+++
T Consensus        66 ----------------------------------------------ka~~~~~~PvL~v~Wsddg-skVf~g~~Dk~~k~   98 (347)
T KOG0647|consen   66 ----------------------------------------------KAQQSHDGPVLDVCWSDDG-SKVFSGGCDKQAKL   98 (347)
T ss_pred             ----------------------------------------------hhhhccCCCeEEEEEccCC-ceEEeeccCCceEE
Confidence                                                          1224689999999999998 89999999999999


Q ss_pred             EECCCCCcccccccceeeecccccCEEEEEEeeCCC-CEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCC
Q psy17682        193 WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQ-NVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS  271 (490)
Q Consensus       193 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~  271 (490)
                      ||+.+++...        +..|..+|.++.|-+... .+|++|+.|.+|+.||++...++.+++ ..+.++++..-  ..
T Consensus        99 wDL~S~Q~~~--------v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-LPeRvYa~Dv~--~p  167 (347)
T KOG0647|consen   99 WDLASGQVSQ--------VAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-LPERVYAADVL--YP  167 (347)
T ss_pred             EEccCCCeee--------eeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee-ccceeeehhcc--Cc
Confidence            9999996543        345999999999987641 279999999999999999999999888 56778888764  56


Q ss_pred             EEEEEeCCCeEEEEeCCCCce-eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC--CCeEEEeccC-
Q psy17682        272 KLLTTCKDKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD--EPIVMVELDT-  347 (490)
Q Consensus       272 ~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~--~~~~~~~~~~-  347 (490)
                      +++++..++.|.+|+++.+.. .+.........+++++..++....+.|+   .+|.+.|..++...  ....+..... 
T Consensus       168 m~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGs---iEGrv~iq~id~~~~~~nFtFkCHR~~  244 (347)
T KOG0647|consen  168 MAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGS---IEGRVAIQYIDDPNPKDNFTFKCHRST  244 (347)
T ss_pred             eeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeee---ecceEEEEecCCCCccCceeEEEeccC
Confidence            788889999999999987643 2333333444588999998887778888   68888888877642  2222222111 


Q ss_pred             ------CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc
Q psy17682        348 ------SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       348 ------~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  414 (490)
                            .-.|++++|+|.-..| ++.+.||++.+||-.....   ......++.+|++.+|+.+|.+++.+-+
T Consensus       245 ~~~~~~VYaVNsi~FhP~hgtl-vTaGsDGtf~FWDkdar~k---Lk~s~~~~qpItcc~fn~~G~ifaYA~g  313 (347)
T KOG0647|consen  245 NSVNDDVYAVNSIAFHPVHGTL-VTAGSDGTFSFWDKDARTK---LKTSETHPQPITCCSFNRNGSIFAYALG  313 (347)
T ss_pred             CCCCCceEEecceEeecccceE-EEecCCceEEEecchhhhh---hhccCcCCCccceeEecCCCCEEEEEee
Confidence                  1247889999988787 7888999999999887652   2222346679999999999998776533

>KOG0641|consensus

Probab=99.96  E-value=1.7e-25  Score=181.64  Aligned_cols=251  Identities=18%  Similarity=0.256  Sum_probs=195.2

Q ss_pred             ecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC---CCCEEEEEeC-C
Q psy17682        162 GGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT---AQNVLLTAGS-D  237 (490)
Q Consensus       162 ~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~-d  237 (490)
                      +.|++.|.|.+|+|+| .++++|+.|.+|++.-++...+..  ..+...+..|.+.|..++|..+   +..+|++++. |
T Consensus        86 khhkgsiyc~~ws~~g-eliatgsndk~ik~l~fn~dt~~~--~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagd  162 (350)
T KOG0641|consen   86 KHHKGSIYCTAWSPCG-ELIATGSNDKTIKVLPFNADTCNA--TGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGD  162 (350)
T ss_pred             cccCccEEEEEecCcc-CeEEecCCCceEEEEecccccccc--cCcceeeeecCCceeeeEEecCCCcCceEEEecCCCc
Confidence            5799999999999999 899999999999998776544322  2444556779999999999654   3347777765 6


Q ss_pred             CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee------ecCCCceeEEEEeC
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV------CHEGSKATRAIYLK  311 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------~~~~~~~~~~~~s~  311 (490)
                      ..|++-|...|+..+.+.+|.+.|.++ ++-++-.+++|+.|.+|++||++-..++.++.      +..+..+..++..|
T Consensus       163 c~iy~tdc~~g~~~~a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdp  241 (350)
T KOG0641|consen  163 CKIYITDCGRGQGFHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDP  241 (350)
T ss_pred             ceEEEeecCCCCcceeecCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECC
Confidence            678888999999999999999999887 34468899999999999999999988887765      22234589999999


Q ss_pred             CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe-eEEeee
Q psy17682        312 SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF-VHYINT  390 (490)
Q Consensus       312 ~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~-~~~~~~  390 (490)
                      .|++|++|-   .|....+||++.+....  ....|...|.++.|+|...|| ++++.|..|++-|+...-.. +..+..
T Consensus       242 sgrll~sg~---~dssc~lydirg~r~iq--~f~phsadir~vrfsp~a~yl-lt~syd~~ikltdlqgdla~el~~~vv  315 (350)
T KOG0641|consen  242 SGRLLASGH---ADSSCMLYDIRGGRMIQ--RFHPHSADIRCVRFSPGAHYL-LTCSYDMKIKLTDLQGDLAHELPIMVV  315 (350)
T ss_pred             Ccceeeecc---CCCceEEEEeeCCceee--eeCCCccceeEEEeCCCceEE-EEecccceEEEeecccchhhcCceEEE
Confidence            999999998   68889999999765322  233677789999999999998 79999999999999753210 111222


Q ss_pred             eeCCCceeeEEEeeCceeEEee--cceeEEEEec
Q psy17682        391 FQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLN  422 (490)
Q Consensus       391 ~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~  422 (490)
                      -.+...+..+.|+|...-++++  +....+|-+.
T Consensus       316 ~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~  349 (350)
T KOG0641|consen  316 AEHKDKAIQCRWHPQDFSFISSSADKTATLWALN  349 (350)
T ss_pred             EeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence            3455678889999987555544  4577788653

>KOG0305|consensus

Probab=99.96  E-value=8.6e-27  Score=217.40  Aligned_cols=267  Identities=18%  Similarity=0.270  Sum_probs=218.5

Q ss_pred             EeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceee
Q psy17682        131 RKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD  210 (490)
Q Consensus       131 ~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  210 (490)
                      .+.+-+..+.+|+..     .+..   ......++..|+++.|+++| .+|++|..+|.|.|||..+.+.+..+.     
T Consensus       191 laValg~~vylW~~~-----s~~v---~~l~~~~~~~vtSv~ws~~G-~~LavG~~~g~v~iwD~~~~k~~~~~~-----  256 (484)
T KOG0305|consen  191 LAVALGQSVYLWSAS-----SGSV---TELCSFGEELVTSVKWSPDG-SHLAVGTSDGTVQIWDVKEQKKTRTLR-----  256 (484)
T ss_pred             EEEEecceEEEEecC-----CCce---EEeEecCCCceEEEEECCCC-CEEEEeecCCeEEEEehhhcccccccc-----
Confidence            334455678899874     2221   12223348999999999999 899999999999999998887766543     


Q ss_pred             ecc-cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEE-EecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy17682        211 LLY-HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQ-IECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPR  288 (490)
Q Consensus       211 ~~~-~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~  288 (490)
                        + |...|.+++|+  + ..+.+|+.|+.|..+|++..+.... +.+|...|..+.|++|++++++|+.|+.+.|||..
T Consensus       257 --~~h~~rvg~laW~--~-~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~  331 (484)
T KOG0305|consen  257 --GSHASRVGSLAWN--S-SVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGL  331 (484)
T ss_pred             --CCcCceeEEEecc--C-ceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCC
Confidence              4 89999999999  2 4899999999999999998876555 78999999999999999999999999999999998


Q ss_pred             CCceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEE-
Q psy17682        289 TGAIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLC-  366 (490)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-  366 (490)
                      ..+++..+..|... +..++|+|- ..+||+|+.. .|+.|++||..++.   .+........|.++.|++..+.|+.+ 
T Consensus       332 ~~~p~~~~~~H~aA-VKA~awcP~q~~lLAsGGGs-~D~~i~fwn~~~g~---~i~~vdtgsQVcsL~Wsk~~kEi~sth  406 (484)
T KOG0305|consen  332 SPEPKFTFTEHTAA-VKALAWCPWQSGLLATGGGS-ADRCIKFWNTNTGA---RIDSVDTGSQVCSLIWSKKYKELLSTH  406 (484)
T ss_pred             CccccEEEecccee-eeEeeeCCCccCceEEcCCC-cccEEEEEEcCCCc---EecccccCCceeeEEEcCCCCEEEEec
Confidence            88999999999886 999999997 5678877643 69999999999876   34555667789999999999777444 


Q ss_pred             ecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCC
Q psy17682        367 GKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNS  424 (490)
Q Consensus       367 g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~  424 (490)
                      |..++.|.||++.+.++   ......|...|..++++|||..++++  ++++++|++.+.
T Consensus       407 G~s~n~i~lw~~ps~~~---~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  407 GYSENQITLWKYPSMKL---VAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             CCCCCcEEEEeccccce---eeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence            45678999999998662   22223566789999999999887766  679999998874

>KOG0973|consensus

Probab=99.96  E-value=2.5e-27  Score=232.42  Aligned_cols=273  Identities=19%  Similarity=0.279  Sum_probs=217.0

Q ss_pred             CCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682         33 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST  112 (490)
Q Consensus        33 ~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (490)
                      .++.+-+...|.+.|+|+.|+|+| .+||+||+|+.|.||......  .                    +.         
T Consensus        58 l~k~l~~m~~h~~sv~CVR~S~dG-~~lAsGSDD~~v~iW~~~~~~--~--------------------~~---------  105 (942)
T KOG0973|consen   58 LPKHLCTMDDHDGSVNCVRFSPDG-SYLASGSDDRLVMIWERAEIG--S--------------------GT---------  105 (942)
T ss_pred             cchhheeeccccCceeEEEECCCC-CeEeeccCcceEEEeeecccC--C--------------------cc---------
Confidence            678888999999999999999999 999999999999999877411  0                    00         


Q ss_pred             CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEE
Q psy17682        113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKV  192 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~i  192 (490)
                         +.               +..+|.           ..-+.++.+.++.+|.+.|..++|+|++ .+|++++.|++|.|
T Consensus       106 ---~f---------------gs~g~~-----------~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~-~~lvS~s~DnsVii  155 (942)
T KOG0973|consen  106 ---VF---------------GSTGGA-----------KNVESWKVVSILRGHDSDVLDVNWSPDD-SLLVSVSLDNSVII  155 (942)
T ss_pred             ---cc---------------cccccc-----------cccceeeEEEEEecCCCccceeccCCCc-cEEEEecccceEEE
Confidence               00               000010           1222345677889999999999999988 89999999999999


Q ss_pred             EECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecC------CCcEEEEEE
Q psy17682        193 WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH------PDIVYSASW  266 (490)
Q Consensus       193 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~------~~~v~~~~~  266 (490)
                      |+..+.+.+..       +.+|.+.|..+.|.|-|+ +|++-+.|++|+||+..+....+.+..+      ......+.|
T Consensus       156 wn~~tF~~~~v-------l~~H~s~VKGvs~DP~Gk-y~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSW  227 (942)
T KOG0973|consen  156 WNAKTFELLKV-------LRGHQSLVKGVSWDPIGK-YFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSW  227 (942)
T ss_pred             Eccccceeeee-------eecccccccceEECCccC-eeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeeccc
Confidence            99987765554       667999999999999996 9999999999999998776666666533      345789999


Q ss_pred             cCCCCEEEEEeC----CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC------C-----------cEEEEEeCCCce
Q psy17682        267 NWDGSKLLTTCK----DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS------G-----------LIFTTGFSKMSE  325 (490)
Q Consensus       267 ~~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~------~-----------~~l~~~~~~~~~  325 (490)
                      +|||.+|++...    -.++.|.+-.+.+.-..+.+|..+ +.++.|+|.      .           ..+|+|+   .|
T Consensus       228 SPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p-~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgS---qD  303 (942)
T KOG0973|consen  228 SPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAP-VEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGS---QD  303 (942)
T ss_pred             CCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCc-eEEEEeChHHhccccccCCccCCCcceEEEEEec---CC
Confidence            999999998752    346889988888888889999985 999999983      1           1567777   89


Q ss_pred             eEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        326 RQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       326 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      +.|.||.....+.......+ ....|..++|+|||-.|+ ++|.||+|.+..+...
T Consensus       304 rSlSVW~T~~~RPl~vi~~l-f~~SI~DmsWspdG~~Lf-acS~DGtV~~i~Fee~  357 (942)
T KOG0973|consen  304 RSLSVWNTALPRPLFVIHNL-FNKSIVDMSWSPDGFSLF-ACSLDGTVALIHFEEK  357 (942)
T ss_pred             ccEEEEecCCCCchhhhhhh-hcCceeeeeEcCCCCeEE-EEecCCeEEEEEcchH
Confidence            99999999765543333332 246799999999999994 6789999999998764

>KOG0305|consensus

Probab=99.96  E-value=1e-26  Score=216.88  Aligned_cols=281  Identities=22%  Similarity=0.303  Sum_probs=225.2

Q ss_pred             eeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccce
Q psy17682         47 VGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEF  126 (490)
Q Consensus        47 V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~  126 (490)
                      .+-+.|+..+  .|+. +....|.+|+..++....                +....       ...+.++.|++++    
T Consensus       180 ~nlldWss~n--~laV-alg~~vylW~~~s~~v~~----------------l~~~~-------~~~vtSv~ws~~G----  229 (484)
T KOG0305|consen  180 LNLLDWSSAN--VLAV-ALGQSVYLWSASSGSVTE----------------LCSFG-------EELVTSVKWSPDG----  229 (484)
T ss_pred             hhHhhcccCC--eEEE-EecceEEEEecCCCceEE----------------eEecC-------CCceEEEEECCCC----
Confidence            4456777543  3443 445789999998866211                11111       3468999999996    


Q ss_pred             EEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeec-ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccc
Q psy17682        127 KEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGG-HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLT  205 (490)
Q Consensus       127 ~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  205 (490)
                       ..++.+..+|.+.+|+..        ..+.++.+.+ |...|-+++|.  + ..+.+|+.|+.|..+|++..+....  
T Consensus       230 -~~LavG~~~g~v~iwD~~--------~~k~~~~~~~~h~~rvg~laW~--~-~~lssGsr~~~I~~~dvR~~~~~~~--  295 (484)
T KOG0305|consen  230 -SHLAVGTSDGTVQIWDVK--------EQKKTRTLRGSHASRVGSLAWN--S-SVLSSGSRDGKILNHDVRISQHVVS--  295 (484)
T ss_pred             -CEEEEeecCCeEEEEehh--------hccccccccCCcCceeEEEecc--C-ceEEEecCCCcEEEEEEecchhhhh--
Confidence             578899999999999986        2234556666 99999999999  3 7899999999999999987765443  


Q ss_pred             cceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC-CCCEEEEEe--CCCeE
Q psy17682        206 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW-DGSKLLTTC--KDKKM  282 (490)
Q Consensus       206 ~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~--~dg~i  282 (490)
                          .+.+|...|..++|++++. ++|+|+.|+.+.|||....+++..+..|...|.+++|+| ...+||+|+  .|+.|
T Consensus       296 ----~~~~H~qeVCgLkws~d~~-~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i  370 (484)
T KOG0305|consen  296 ----TLQGHRQEVCGLKWSPDGN-QLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCI  370 (484)
T ss_pred             ----hhhcccceeeeeEECCCCC-eeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEE
Confidence                1567999999999999995 999999999999999988889999999999999999999 667888875  69999


Q ss_pred             EEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCe
Q psy17682        283 RIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNL  362 (490)
Q Consensus       283 ~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  362 (490)
                      ++||+.+++.+..+..  +..|+.+.|++..+-|+++..- .+..|.||+..+...  .....+|...|..++++|||..
T Consensus       371 ~fwn~~~g~~i~~vdt--gsQVcsL~Wsk~~kEi~sthG~-s~n~i~lw~~ps~~~--~~~l~gH~~RVl~la~SPdg~~  445 (484)
T KOG0305|consen  371 KFWNTNTGARIDSVDT--GSQVCSLIWSKKYKELLSTHGY-SENQITLWKYPSMKL--VAELLGHTSRVLYLALSPDGET  445 (484)
T ss_pred             EEEEcCCCcEeccccc--CCceeeEEEcCCCCEEEEecCC-CCCcEEEEeccccce--eeeecCCcceeEEEEECCCCCE
Confidence            9999999999888763  3359999999998656554322 467899999987543  2233477888999999999999


Q ss_pred             EEEEecCCCeEEEEEecCCC
Q psy17682        363 VYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       363 l~~~g~~dg~i~iwd~~~~~  382 (490)
                      + ++|+.|.++++|++-...
T Consensus       446 i-~t~a~DETlrfw~~f~~~  464 (484)
T KOG0305|consen  446 I-VTGAADETLRFWNLFDER  464 (484)
T ss_pred             E-EEecccCcEEeccccCCC
Confidence            9 899999999999998753

>KOG0772|consensus

Probab=99.96  E-value=3e-27  Score=213.25  Aligned_cols=248  Identities=15%  Similarity=0.171  Sum_probs=188.8

Q ss_pred             ceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC
Q psy17682        159 ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN  238 (490)
Q Consensus       159 ~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg  238 (490)
                      ..+.+|+..|.++++.|.| .+|++|+.|.+|++||+............+  .......|.+++|++.+. .|++.+...
T Consensus       161 i~l~hgtk~Vsal~~Dp~G-aR~~sGs~Dy~v~~wDf~gMdas~~~fr~l--~P~E~h~i~sl~ys~Tg~-~iLvvsg~a  236 (641)
T KOG0772|consen  161 IQLKHGTKIVSALAVDPSG-ARFVSGSLDYTVKFWDFQGMDASMRSFRQL--QPCETHQINSLQYSVTGD-QILVVSGSA  236 (641)
T ss_pred             EeccCCceEEEEeeecCCC-ceeeeccccceEEEEecccccccchhhhcc--CcccccccceeeecCCCC-eEEEEecCc
Confidence            4578999999999999998 899999999999999997543322111111  122445689999999996 666666678


Q ss_pred             cEEEEECCCCeeEEE------------EecCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCcee-eeee----ecC
Q psy17682        239 NVAIWNVGTGEIMIQ------------IECHPDIVYSASWNWDG-SKLLTTCKDKKMRIINPRTGAIE-EEAV----CHE  300 (490)
Q Consensus       239 ~v~iwd~~~~~~~~~------------~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~-~~~~----~~~  300 (490)
                      ..+|+|....+.+..            -++|...++|.+|+|.. ..+++++.||++||||+...+.. ..+.    +..
T Consensus       237 qakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~  316 (641)
T KOG0772|consen  237 QAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGK  316 (641)
T ss_pred             ceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCc
Confidence            899999654333222            24788999999999955 68999999999999999876432 2232    222


Q ss_pred             CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC-CCeEEEeccCCC--ceeeeeecCCCCeEEEEecCCCeEEEEE
Q psy17682        301 GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD-EPIVMVELDTSN--GVMFPLYDPDTNLVYLCGKGDSVIRYFE  377 (490)
Q Consensus       301 ~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~-~~~~~~~~~~~~--~i~~~~~s~~~~~l~~~g~~dg~i~iwd  377 (490)
                      .-+++.++|+++|.++|+|.   .||.|.+|+..+.. .+.....-.|..  .|+++.||+||++| ++-+.|+++++||
T Consensus       317 Rv~~tsC~~nrdg~~iAagc---~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~L-lSRg~D~tLKvWD  392 (641)
T KOG0772|consen  317 RVPVTSCAWNRDGKLIAAGC---LDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYL-LSRGFDDTLKVWD  392 (641)
T ss_pred             ccCceeeecCCCcchhhhcc---cCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchh-hhccCCCceeeee
Confidence            23578999999999999998   79999999976543 233333334544  79999999999999 7889999999999


Q ss_pred             ecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc
Q psy17682        378 ITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  414 (490)
                      ++..+..+.....+....+-+.++|||+.+++++|..
T Consensus       393 Lrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS  429 (641)
T KOG0772|consen  393 LRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTS  429 (641)
T ss_pred             ccccccchhhhcCCCccCCCCccccCCCceEEEeccc
Confidence            9987765555555566667899999999999998843

>KOG2106|consensus

Probab=99.96  E-value=7.2e-25  Score=197.55  Aligned_cols=321  Identities=18%  Similarity=0.227  Sum_probs=241.7

Q ss_pred             ccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecc
Q psy17682         41 LYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISE  120 (490)
Q Consensus        41 ~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  120 (490)
                      ..-++.|....|+|.++++++++|+ +++..|+++.+.+..                  ..+..+...+ ..|.+++|.+
T Consensus       197 k~sne~v~~a~FHPtd~nliit~Gk-~H~~Fw~~~~~~l~k------------------~~~~fek~ek-k~Vl~v~F~e  256 (626)
T KOG2106|consen  197 KTSNEVVFLATFHPTDPNLIITCGK-GHLYFWTLRGGSLVK------------------RQGIFEKREK-KFVLCVTFLE  256 (626)
T ss_pred             eeccceEEEEEeccCCCcEEEEeCC-ceEEEEEccCCceEE------------------Eeeccccccc-eEEEEEEEcC
Confidence            3456788999999999999999998 999999998865322                  1122222333 6789999999


Q ss_pred             ccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCc
Q psy17682        121 DYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGI  200 (490)
Q Consensus       121 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~  200 (490)
                      ++      -+.++.++|.|.||...     ..+   ..+....|.+.|.+++...+|  .|++|+.|..|..|| .+-+.
T Consensus       257 ng------dviTgDS~G~i~Iw~~~-----~~~---~~k~~~aH~ggv~~L~~lr~G--tllSGgKDRki~~Wd-~~y~k  319 (626)
T KOG2106|consen  257 NG------DVITGDSGGNILIWSKG-----TNR---ISKQVHAHDGGVFSLCMLRDG--TLLSGGKDRKIILWD-DNYRK  319 (626)
T ss_pred             CC------CEEeecCCceEEEEeCC-----Cce---EEeEeeecCCceEEEEEecCc--cEeecCccceEEecc-ccccc
Confidence            86      68889999999999863     222   222333899999999999887  566799999999999 44444


Q ss_pred             ccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCC
Q psy17682        201 SRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK  280 (490)
Q Consensus       201 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  280 (490)
                      ++...     +....++|+.++=.  +. -|+.|...+.|..=.++++-.+ ...+|......++.+|+.+.+++++.|+
T Consensus       320 ~r~~e-----lPe~~G~iRtv~e~--~~-di~vGTtrN~iL~Gt~~~~f~~-~v~gh~delwgla~hps~~q~~T~gqdk  390 (626)
T KOG2106|consen  320 LRETE-----LPEQFGPIRTVAEG--KG-DILVGTTRNFILQGTLENGFTL-TVQGHGDELWGLATHPSKNQLLTCGQDK  390 (626)
T ss_pred             ccccc-----CchhcCCeeEEecC--CC-cEEEeeccceEEEeeecCCceE-EEEecccceeeEEcCCChhheeeccCcc
Confidence            44433     33456778877543  22 2677777677766566555433 3456899999999999999999999999


Q ss_pred             eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCC
Q psy17682        281 KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDT  360 (490)
Q Consensus       281 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~  360 (490)
                      .+++|+  ..++..+.....  +..++.|+|.| .++.|+   ..|...+.|..+.. ...+.. . ...++.+.|+|+|
T Consensus       391 ~v~lW~--~~k~~wt~~~~d--~~~~~~fhpsg-~va~Gt---~~G~w~V~d~e~~~-lv~~~~-d-~~~ls~v~ysp~G  459 (626)
T KOG2106|consen  391 HVRLWN--DHKLEWTKIIED--PAECADFHPSG-VVAVGT---ATGRWFVLDTETQD-LVTIHT-D-NEQLSVVRYSPDG  459 (626)
T ss_pred             eEEEcc--CCceeEEEEecC--ceeEeeccCcc-eEEEee---ccceEEEEecccce-eEEEEe-c-CCceEEEEEcCCC
Confidence            999999  555555554322  48899999999 889998   68899999998733 222222 2 6789999999999


Q ss_pred             CeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--eeEEEE
Q psy17682        361 NLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--IGRFFR  420 (490)
Q Consensus       361 ~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~  420 (490)
                      .+| |.|+.|+.|+||.+..+......+..... .+|+.+.||+|++++.+.+.  .+-+|.
T Consensus       460 ~~l-Avgs~d~~iyiy~Vs~~g~~y~r~~k~~g-s~ithLDwS~Ds~~~~~~S~d~eiLyW~  519 (626)
T KOG2106|consen  460 AFL-AVGSHDNHIYIYRVSANGRKYSRVGKCSG-SPITHLDWSSDSQFLVSNSGDYEILYWK  519 (626)
T ss_pred             CEE-EEecCCCeEEEEEECCCCcEEEEeeeecC-ceeEEeeecCCCceEEeccCceEEEEEc
Confidence            999 88999999999999987655555544444 89999999999999998766  445563

>KOG0643|consensus

Probab=99.96  E-value=1.8e-26  Score=191.81  Aligned_cols=236  Identities=17%  Similarity=0.241  Sum_probs=203.9

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCc
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNN  239 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~  239 (490)
                      .++||+.+++-+.++.+| .+|++|+.|.++.+|-..+|+.+.+       +.+|.+.|+|+....+.+ .+++|+.|.+
T Consensus         5 ~l~GHERplTqiKyN~eG-DLlFscaKD~~~~vw~s~nGerlGt-------y~GHtGavW~~Did~~s~-~liTGSAD~t   75 (327)
T KOG0643|consen    5 LLQGHERPLTQIKYNREG-DLLFSCAKDSTPTVWYSLNGERLGT-------YDGHTGAVWCCDIDWDSK-HLITGSADQT   75 (327)
T ss_pred             ccccCccccceEEecCCC-cEEEEecCCCCceEEEecCCceeee-------ecCCCceEEEEEecCCcc-eeeeccccce
Confidence            468999999999999998 8999999999999999888877665       567999999999999885 8999999999


Q ss_pred             EEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC-----CCeEEEEeCC-------CCceeeeeeecCCCceeEE
Q psy17682        240 VAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK-----DKKMRIINPR-------TGAIEEEAVCHEGSKATRA  307 (490)
Q Consensus       240 v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~-------~~~~~~~~~~~~~~~~~~~  307 (490)
                      +++||+.+|+.+..++ ...+|..+.|+++|++++.+..     .+.|.++|++       ..++...+..+.+ .++.+
T Consensus        76 ~kLWDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~s-kit~a  153 (327)
T KOG0643|consen   76 AKLWDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDS-KITSA  153 (327)
T ss_pred             eEEEEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCcc-ceeee
Confidence            9999999999999998 5788999999999998887764     3679999998       3455666666665 49999


Q ss_pred             EEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEE
Q psy17682        308 IYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHY  387 (490)
Q Consensus       308 ~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~  387 (490)
                      .|.|-++.|++|.   .+|.|.+||.+++........ .|...|+.+.+++|..++ ++++.|.+-++||+.+-+    .
T Consensus       154 ~Wg~l~~~ii~Gh---e~G~is~~da~~g~~~v~s~~-~h~~~Ind~q~s~d~T~F-iT~s~Dttakl~D~~tl~----v  224 (327)
T KOG0643|consen  154 LWGPLGETIIAGH---EDGSISIYDARTGKELVDSDE-EHSSKINDLQFSRDRTYF-ITGSKDTTAKLVDVRTLE----V  224 (327)
T ss_pred             eecccCCEEEEec---CCCcEEEEEcccCceeeechh-hhccccccccccCCcceE-EecccCccceeeecccee----e
Confidence            9999999999998   799999999998765443332 456789999999999997 899999999999999876    6


Q ss_pred             eeeeeCCCceeeEEEeeCceeEEeecce
Q psy17682        388 INTFQTPDPQRGIGMMPKRGCDVNSCEI  415 (490)
Q Consensus       388 ~~~~~~~~~i~~~~~sp~~~~l~~~~~~  415 (490)
                      +..+....|+++.+++|-...++.+++.
T Consensus       225 ~Kty~te~PvN~aaisP~~d~VilgGGq  252 (327)
T KOG0643|consen  225 LKTYTTERPVNTAAISPLLDHVILGGGQ  252 (327)
T ss_pred             EEEeeecccccceecccccceEEecCCc
Confidence            7777888899999999988777777664

>KOG0310|consensus

Probab=99.96  E-value=4e-27  Score=211.47  Aligned_cols=207  Identities=19%  Similarity=0.268  Sum_probs=175.8

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      ++.+.+|+.+|..+.|+|+++..+++|++|+.+++||+.+...       ...+.+|.+.|.|.+|+|..++++++||.|
T Consensus       103 LR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v-------~~~l~~htDYVR~g~~~~~~~hivvtGsYD  175 (487)
T KOG0310|consen  103 LRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYV-------QAELSGHTDYVRCGDISPANDHIVVTGSYD  175 (487)
T ss_pred             HHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEE-------EEEecCCcceeEeeccccCCCeEEEecCCC
Confidence            4467799999999999999989999999999999999987763       223778999999999999988899999999


Q ss_pred             CcEEEEECCCC-eeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-eeeeeeecCCCceeEEEEeCCCcE
Q psy17682        238 NNVAIWNVGTG-EIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGA-IEEEAVCHEGSKATRAIYLKSGLI  315 (490)
Q Consensus       238 g~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~  315 (490)
                      |+|++||++.. ..+.++. |..+|..+.+-|.|..|++++. ..+++||+-+|. .+..+..|... ++|+.+..++..
T Consensus       176 g~vrl~DtR~~~~~v~eln-hg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~Kt-VTcL~l~s~~~r  252 (487)
T KOG0310|consen  176 GKVRLWDTRSLTSRVVELN-HGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKT-VTCLRLASDSTR  252 (487)
T ss_pred             ceEEEEEeccCCceeEEec-CCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceehhhhhcccce-EEEEEeecCCce
Confidence            99999999987 6677776 9999999999999999999874 789999999664 44444457765 999999999999


Q ss_pred             EEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        316 FTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       316 l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      |++|+   -|+.+++||..+.+   ....+.-.++|.+++.+|+++.+ +.|..||.+-+=+....
T Consensus       253 LlS~s---LD~~VKVfd~t~~K---vv~s~~~~~pvLsiavs~dd~t~-viGmsnGlv~~rr~~~k  311 (487)
T KOG0310|consen  253 LLSGS---LDRHVKVFDTTNYK---VVHSWKYPGPVLSIAVSPDDQTV-VIGMSNGLVSIRRREVK  311 (487)
T ss_pred             Eeecc---cccceEEEEccceE---EEEeeecccceeeEEecCCCceE-EEecccceeeeehhhcc
Confidence            99998   89999999977654   45556667899999999999999 77889998877654443

>KOG1446|consensus

Probab=99.95  E-value=2.8e-25  Score=189.67  Aligned_cols=249  Identities=13%  Similarity=0.179  Sum_probs=200.9

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC--C
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS--D  237 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--d  237 (490)
                      .+..-.+.|+++.|+++| .++++++.|.+++|||..+++.++.+..       +...+..++|..... .++.++.  |
T Consensus         9 ~f~~~~~~i~sl~fs~~G-~~litss~dDsl~LYd~~~g~~~~ti~s-------kkyG~~~~~Fth~~~-~~i~sStk~d   79 (311)
T KOG1446|consen    9 VFRETNGKINSLDFSDDG-LLLITSSEDDSLRLYDSLSGKQVKTINS-------KKYGVDLACFTHHSN-TVIHSSTKED   79 (311)
T ss_pred             ccccCCCceeEEEecCCC-CEEEEecCCCeEEEEEcCCCceeeEeec-------ccccccEEEEecCCc-eEEEccCCCC
Confidence            344567899999999998 8899999999999999999988877553       667788888877653 5665555  8


Q ss_pred             CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEE
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFT  317 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~  317 (490)
                      .+||..++.+.+.++-|.+|...|.+++.+|-+..+++++.|++|++||+|..++...+....   ...++|+|+|.++|
T Consensus        80 ~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~---~pi~AfDp~GLifA  156 (311)
T KOG1446|consen   80 DTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSG---RPIAAFDPEGLIFA  156 (311)
T ss_pred             CceEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCC---CcceeECCCCcEEE
Confidence            899999999999999999999999999999999999999999999999999888877665332   45678999999999


Q ss_pred             EEeCCCceeEEEEecCCCC-CCCeEEEecc--CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC
Q psy17682        318 TGFSKMSERQYSLRAPDHL-DEPIVMVELD--TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP  394 (490)
Q Consensus       318 ~~~~~~~~~~i~iwd~~~~-~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~  394 (490)
                      ++.   ....|++||++.. +.|.......  .......+.|||||++|+ .+...+.+++.|.-+|. +...+..+...
T Consensus       157 ~~~---~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iL-lsT~~s~~~~lDAf~G~-~~~tfs~~~~~  231 (311)
T KOG1446|consen  157 LAN---GSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSIL-LSTNASFIYLLDAFDGT-VKSTFSGYPNA  231 (311)
T ss_pred             Eec---CCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEE-EEeCCCcEEEEEccCCc-EeeeEeeccCC
Confidence            997   3449999999986 3455444333  345688999999999995 56678899999999997 33333333332


Q ss_pred             C-ceeeEEEeeCceeEEeec--ceeEEEEecCCC
Q psy17682        395 D-PQRGIGMMPKRGCDVNSC--EIGRFFRLNNSG  425 (490)
Q Consensus       395 ~-~i~~~~~sp~~~~l~~~~--~~~~~~~~~~~~  425 (490)
                      . --.+.+|+||+++++++.  +.+.+|++.++.
T Consensus       232 ~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~  265 (311)
T KOG1446|consen  232 GNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGK  265 (311)
T ss_pred             CCcceeEEECCCCcEEEEecCCCcEEEEEcCCCc
Confidence            2 225789999999999884  588899998876

>KOG1063|consensus

Probab=99.95  E-value=2.3e-26  Score=214.70  Aligned_cols=342  Identities=15%  Similarity=0.174  Sum_probs=254.0

Q ss_pred             cccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCC--CCCCCCCccccceeccccceeecccCCCCCcccccCCeeE
Q psy17682         40 LLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDG--YIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEIT  117 (490)
Q Consensus        40 l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  117 (490)
                      +.||.+.|.++.|+|.+ ..|+|++.|+++++|...+.  .+..                ...++..++  .........
T Consensus       263 l~GHeDWV~sv~W~p~~-~~LLSASaDksmiiW~pd~~tGiWv~----------------~vRlGe~gg--~a~GF~g~l  323 (764)
T KOG1063|consen  263 LMGHEDWVYSVWWHPEG-LDLLSASADKSMIIWKPDENTGIWVD----------------VVRLGEVGG--SAGGFWGGL  323 (764)
T ss_pred             hcCcccceEEEEEccch-hhheecccCcceEEEecCCccceEEE----------------EEEeecccc--cccceeeEE
Confidence            56999999999999999 88999999999999987653  2211                111111111  111345667


Q ss_pred             eccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC-
Q psy17682        118 ISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP-  196 (490)
Q Consensus       118 ~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~-  196 (490)
                      |+|+.     .++.+.+..|.+++|..     +..........+.||.+.|.+++|+|.| .+|++.+.|.+-|++--- 
T Consensus       324 w~~n~-----~~ii~~g~~Gg~hlWkt-----~d~~~w~~~~~iSGH~~~V~dv~W~psG-eflLsvs~DQTTRlFa~wg  392 (764)
T KOG1063|consen  324 WSPNS-----NVIIAHGRTGGFHLWKT-----KDKTFWTQEPVISGHVDGVKDVDWDPSG-EFLLSVSLDQTTRLFARWG  392 (764)
T ss_pred             EcCCC-----CEEEEecccCcEEEEec-----cCccceeeccccccccccceeeeecCCC-CEEEEeccccceeeecccc
Confidence            77774     57888899999999983     3344455666788999999999999998 799999999999999743 


Q ss_pred             CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC-----------------------------
Q psy17682        197 DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT-----------------------------  247 (490)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~-----------------------------  247 (490)
                      ....-+.+..|    .-|...++|++|-+.. ..+++|.....+|+|+...                             
T Consensus       393 ~q~~wHEiaRP----QiHGyDl~c~~~vn~~-~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaL  467 (764)
T KOG1063|consen  393 RQQEWHEIARP----QIHGYDLTCLSFVNED-LQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPAL  467 (764)
T ss_pred             cccceeeeccc----ccccccceeeehccCC-ceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccc
Confidence            11112233332    2388889999999863 5799998888899987521                             


Q ss_pred             --------------Ce---------------------------------eEEEEecCCCcEEEEEEcCCCCEEEEEeCC-
Q psy17682        248 --------------GE---------------------------------IMIQIECHPDIVYSASWNWDGSKLLTTCKD-  279 (490)
Q Consensus       248 --------------~~---------------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-  279 (490)
                                    |.                                 .++.+.+|...|++++.+|+++++++++.. 
T Consensus       468 GLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~  547 (764)
T KOG1063|consen  468 GLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSS  547 (764)
T ss_pred             cccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhC
Confidence                          00                                 011233688889999999999999999854 


Q ss_pred             ----CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE--EeccCCCceee
Q psy17682        280 ----KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM--VELDTSNGVMF  353 (490)
Q Consensus       280 ----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~--~~~~~~~~i~~  353 (490)
                          ..|++|+..+....+.+..|.-. ++.++|||||++|++.+   +|+++.+|...........  ....|...|++
T Consensus       548 ~~ehAvI~lw~t~~W~~~~~L~~HsLT-VT~l~FSpdg~~LLsvs---RDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWd  623 (764)
T KOG1063|consen  548 LKEHAVIRLWNTANWLQVQELEGHSLT-VTRLAFSPDGRYLLSVS---RDRTVSLYEVQEDIKDEFRFACLKAHTRIIWD  623 (764)
T ss_pred             CccceEEEEEeccchhhhheecccceE-EEEEEECCCCcEEEEee---cCceEEeeeeecccchhhhhccccccceEEEE
Confidence                45999999999888889999876 99999999999999998   8999999988643321111  12357777999


Q ss_pred             eeecCCCCeEEEEecCCCeEEEEEecCC--CCeeEEeeeeeCCCceeeEEEeeC-----ceeEEeecc--eeEEEEec
Q psy17682        354 PLYDPDTNLVYLCGKGDSVIRYFEITAE--PPFVHYINTFQTPDPQRGIGMMPK-----RGCDVNSCE--IGRFFRLN  422 (490)
Q Consensus       354 ~~~s~~~~~l~~~g~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~i~~~~~sp~-----~~~l~~~~~--~~~~~~~~  422 (490)
                      +.|+|++.++ +|+|.|.+|++|.....  + .+..........+|+.+++.|-     +.+++.|-+  .+-+|+..
T Consensus       624 csW~pde~~F-aTaSRDK~VkVW~~~~~~d~-~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~  699 (764)
T KOG1063|consen  624 CSWSPDEKYF-ATASRDKKVKVWEEPDLRDK-YISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRK  699 (764)
T ss_pred             cccCccccee-EEecCCceEEEEeccCchhh-hhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEecc
Confidence            9999999996 89999999999999887  4 2223344566789999999873     235666644  55566643

>KOG0301|consensus

Probab=99.95  E-value=3.1e-26  Score=213.86  Aligned_cols=285  Identities=18%  Similarity=0.213  Sum_probs=221.2

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      .+....+.||+.-|..++..+.  ..++++|+||++++|+-+.+++......             .  ++     .....
T Consensus         4 Y~ls~~l~gH~~DVr~v~~~~~--~~i~s~sRd~t~~vw~~~~~~~l~~~~~-------------~--~~-----~g~i~   61 (745)
T KOG0301|consen    4 YKLSHELEGHKSDVRAVAVTDG--VCIISGSRDGTVKVWAKKGKQYLETHAF-------------E--GP-----KGFIA   61 (745)
T ss_pred             ceeEEEeccCccchheeEecCC--eEEeecCCCCceeeeeccCcccccceec-------------c--cC-----cceee
Confidence            4566789999999999997764  4699999999999999877654321000             0  00     00011


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                      ..+++.+..    ...+..++.|+.+.+|.+.        ...++.++.||+..|.|++...++ . ++|||.|.++++|
T Consensus        62 ~~i~y~e~~----~~~l~~g~~D~~i~v~~~~--------~~~P~~~LkgH~snVC~ls~~~~~-~-~iSgSWD~TakvW  127 (745)
T KOG0301|consen   62 NSICYAESD----KGRLVVGGMDTTIIVFKLS--------QAEPLYTLKGHKSNVCSLSIGEDG-T-LISGSWDSTAKVW  127 (745)
T ss_pred             ccceecccc----CcceEeecccceEEEEecC--------CCCchhhhhccccceeeeecCCcC-c-eEecccccceEEe
Confidence            113332210    1236778999999999886        334677899999999999988766 4 9999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  273 (490)
                      -...  +...       +.+|...|+.++.-|++  .++||+.|.+|++|.-  ++.+.+|.+|.+.|..+++-+++ .|
T Consensus       128 ~~~~--l~~~-------l~gH~asVWAv~~l~e~--~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~-~f  193 (745)
T KOG0301|consen  128 RIGE--LVYS-------LQGHTASVWAVASLPEN--TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDS-HF  193 (745)
T ss_pred             cchh--hhcc-------cCCcchheeeeeecCCC--cEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCC-Ce
Confidence            7643  2222       66799999999999987  6999999999999985  78899999999999999998754 58


Q ss_pred             EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC-Ccee
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS-NGVM  352 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~-~~i~  352 (490)
                      ++++.||.|++|++ +++++.++.+|.+. ++++....++..+++++   .|++++||+..  .+   .+.+.+. ..++
T Consensus       194 lScsNDg~Ir~w~~-~ge~l~~~~ghtn~-vYsis~~~~~~~Ivs~g---EDrtlriW~~~--e~---~q~I~lPttsiW  263 (745)
T KOG0301|consen  194 LSCSNDGSIRLWDL-DGEVLLEMHGHTNF-VYSISMALSDGLIVSTG---EDRTLRIWKKD--EC---VQVITLPTTSIW  263 (745)
T ss_pred             EeecCCceEEEEec-cCceeeeeeccceE-EEEEEecCCCCeEEEec---CCceEEEeecC--ce---EEEEecCccceE
Confidence            89999999999999 78899999999986 99999777777777776   79999999987  32   2333333 3689


Q ss_pred             eeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        353 FPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       353 ~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      ++.+-++|..+  +|+.||.||||....
T Consensus       264 sa~~L~NgDIv--vg~SDG~VrVfT~~k  289 (745)
T KOG0301|consen  264 SAKVLLNGDIV--VGGSDGRVRVFTVDK  289 (745)
T ss_pred             EEEEeeCCCEE--EeccCceEEEEEecc
Confidence            99998888775  688999999998763

>KOG1332|consensus

Probab=99.95  E-value=4e-27  Score=193.28  Aligned_cols=259  Identities=18%  Similarity=0.221  Sum_probs=202.5

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      ...-.+|.+.|..+...-.| +.|+||+.|++|+|+..+.+..                                     
T Consensus         4 q~idt~H~D~IHda~lDyyg-krlATcsSD~tVkIf~v~~n~~-------------------------------------   45 (299)
T KOG1332|consen    4 QTIDTQHEDMIHDAQLDYYG-KRLATCSSDGTVKIFEVRNNGQ-------------------------------------   45 (299)
T ss_pred             eehhhhhhhhhhHhhhhhhc-ceeeeecCCccEEEEEEcCCCC-------------------------------------
Confidence            34567899999999999888 9999999999999998876431                                     


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECC-CCCCEEEEEeCCCcEEEEEC
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSP-HDDNVIASGSEDCVVKVWQI  195 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p-~~~~~l~s~~~dg~i~iwd~  195 (490)
                                                            ...+.+|.||.++|+.++|.. .-+.+||+++.||+|.||.-
T Consensus        46 --------------------------------------s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke   87 (299)
T KOG1332|consen   46 --------------------------------------SKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE   87 (299)
T ss_pred             --------------------------------------ceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence                                                  012336789999999999954 33389999999999999998


Q ss_pred             CCCCcccccccceeeecccccCEEEEEEeeCC-CCEEEEEeCCCcEEEEECCCC-e--eEEEEecCCCcEEEEEEcCC--
Q psy17682        196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTA-QNVLLTAGSDNNVAIWNVGTG-E--IMIQIECHPDIVYSASWNWD--  269 (490)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~~l~s~~~dg~v~iwd~~~~-~--~~~~~~~~~~~v~~~~~~~~--  269 (490)
                      ++++-.+..     ....|...|++++|.|.+ ..+|++++.||.|.|.+.++. .  .......|.-.|++++|.|.  
T Consensus        88 ~~g~w~k~~-----e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~  162 (299)
T KOG1332|consen   88 ENGRWTKAY-----EHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASA  162 (299)
T ss_pred             CCCchhhhh-----hhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCC
Confidence            777543322     255699999999999974 247899999999999998754 1  22334579999999999985  


Q ss_pred             -C-----------CEEEEEeCCCeEEEEeCCCCc--eeeeeeecCCCceeEEEEeCC----CcEEEEEeCCCceeEEEEe
Q psy17682        270 -G-----------SKLLTTCKDKKMRIINPRTGA--IEEEAVCHEGSKATRAIYLKS----GLIFTTGFSKMSERQYSLR  331 (490)
Q Consensus       270 -~-----------~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~s~~----~~~l~~~~~~~~~~~i~iw  331 (490)
                       |           +.|++|+.|..|+||+...++  ...++.+|.+. ++.++|.|.    -..+++++   .|+++.||
T Consensus       163 ~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dw-VRDVAwaP~~gl~~s~iAS~S---qDg~viIw  238 (299)
T KOG1332|consen  163 PGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDW-VRDVAWAPSVGLPKSTIASCS---QDGTVIIW  238 (299)
T ss_pred             CccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchh-hhhhhhccccCCCceeeEEec---CCCcEEEE
Confidence             4           569999999999999998763  44557788886 999999997    34788888   79999999


Q ss_pred             cCCCCCCCeEEEe-ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        332 APDHLDEPIVMVE-LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       332 d~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      ..+....+..... ......+..+.||+.|+.| +.++.|+.|.+|.-...
T Consensus       239 t~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~L-aVs~GdNkvtlwke~~~  288 (299)
T KOG1332|consen  239 TKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNIL-AVSGGDNKVTLWKENVD  288 (299)
T ss_pred             EecCccCcccccccccCCcceEEEEEeccccEE-EEecCCcEEEEEEeCCC
Confidence            8874322222111 1234568999999999999 66678999999987654

>KOG0288|consensus

Probab=99.95  E-value=1.7e-27  Score=209.43  Aligned_cols=279  Identities=10%  Similarity=0.161  Sum_probs=223.8

Q ss_pred             ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcE
Q psy17682        111 STANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVV  190 (490)
Q Consensus       111 ~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i  190 (490)
                      ..++.+.|-++     ...+++++.+..|.+|+....      ....+.++.|-.++|+.+.|.+++ .++++++.|+.+
T Consensus       176 gev~~v~~l~~-----sdtlatgg~Dr~Ik~W~v~~~------k~~~~~tLaGs~g~it~~d~d~~~-~~~iAas~d~~~  243 (459)
T KOG0288|consen  176 GEVHDVEFLRN-----SDTLATGGSDRIIKLWNVLGE------KSELISTLAGSLGNITSIDFDSDN-KHVIAASNDKNL  243 (459)
T ss_pred             cccceeEEccC-----cchhhhcchhhhhhhhhcccc------hhhhhhhhhccCCCcceeeecCCC-ceEEeecCCCce
Confidence            35677777666     246788999999999998521      134566888999999999999988 889999999999


Q ss_pred             EEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC
Q psy17682        191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG  270 (490)
Q Consensus       191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~  270 (490)
                      ++|++...+...+       +.+|.+.|+++.|..... .+++|+.|.+|++||+....+..++- ....+..++.+  .
T Consensus       244 r~Wnvd~~r~~~T-------LsGHtdkVt~ak~~~~~~-~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~--~  312 (459)
T KOG0288|consen  244 RLWNVDSLRLRHT-------LSGHTDKVTAAKFKLSHS-RVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS--I  312 (459)
T ss_pred             eeeeccchhhhhh-------hcccccceeeehhhcccc-ceeeccccchhhhhhhhhhheecccc-ccccccceEec--c
Confidence            9999998887766       556999999999988763 59999999999999999987777665 35567777776  5


Q ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec--cCC
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL--DTS  348 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~--~~~  348 (490)
                      ..+++|..|++|++||.++..+......+.  .++++..+++|..+.+++   .|.++.+.|+++......+...  ...
T Consensus       313 ~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg--~vtSl~ls~~g~~lLsss---RDdtl~viDlRt~eI~~~~sA~g~k~a  387 (459)
T KOG0288|consen  313 SDVISGHFDKKVRFWDIRSADKTRSVPLGG--RVTSLDLSMDGLELLSSS---RDDTLKVIDLRTKEIRQTFSAEGFKCA  387 (459)
T ss_pred             eeeeecccccceEEEeccCCceeeEeecCc--ceeeEeeccCCeEEeeec---CCCceeeeecccccEEEEeeccccccc
Confidence            678899999999999999999998887655  599999999999888887   7999999999986643333222  223


Q ss_pred             CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--eeEEE
Q psy17682        349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--IGRFF  419 (490)
Q Consensus       349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~  419 (490)
                      +..+.+.|||++.|+ ++|+.||.|+||++.+++ +...+..-..+..|++++|+|.|..+++.+.  .+.+|
T Consensus       388 sDwtrvvfSpd~~Yv-aAGS~dgsv~iW~v~tgK-lE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW  458 (459)
T KOG0288|consen  388 SDWTRVVFSPDGSYV-AAGSADGSVYIWSVFTGK-LEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW  458 (459)
T ss_pred             cccceeEECCCCcee-eeccCCCcEEEEEccCce-EEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence            448889999999999 899999999999999997 3333332223336999999999998888755  44455

>KOG0640|consensus

Probab=99.95  E-value=9.7e-27  Score=197.38  Aligned_cols=247  Identities=17%  Similarity=0.233  Sum_probs=193.8

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC------------CcccccccceeeecccccCEEEEEEee
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG------------GISRTLTEPVVDLLYHQRRVGLVLWHP  225 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~------------~~~~~~~~~~~~~~~~~~~v~~~~~~p  225 (490)
                      ...+..|++++.+.+|+||| .++++|+.|..|+|.|++..            ..... ...+.++..|...|+++.|+|
T Consensus       105 t~ylt~HK~~cR~aafs~DG-~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~-hPvIRTlYDH~devn~l~FHP  182 (430)
T KOG0640|consen  105 TKYLTSHKSPCRAAAFSPDG-SLVATGSADASIKILDVERMLAKSKPKEMISGDTQAR-HPVIRTLYDHVDEVNDLDFHP  182 (430)
T ss_pred             eEEEeecccceeeeeeCCCC-cEEEccCCcceEEEeehhhhhhhcchhhhccCCcccC-CceEeehhhccCcccceeecc
Confidence            34567899999999999999 89999999999999998721            11010 123456788999999999999


Q ss_pred             CCCCEEEEEeCCCcEEEEECCCCeeE---EEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee---ec
Q psy17682        226 TAQNVLLTAGSDNNVAIWNVGTGEIM---IQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV---CH  299 (490)
Q Consensus       226 ~~~~~l~s~~~dg~v~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~  299 (490)
                      ... +|++|+.|++|++||+......   ..++ ...+|.++.|+|.|.+|++|....++++||+++.++...-.   .|
T Consensus       183 re~-ILiS~srD~tvKlFDfsK~saKrA~K~~q-d~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qh  260 (430)
T KOG0640|consen  183 RET-ILISGSRDNTVKLFDFSKTSAKRAFKVFQ-DTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQH  260 (430)
T ss_pred             hhh-eEEeccCCCeEEEEecccHHHHHHHHHhh-ccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCccccc
Confidence            984 9999999999999999754332   2233 46789999999999999999999999999999988765443   56


Q ss_pred             CCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        300 EGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       300 ~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      .+. ++++.+++.|++.++++   .||.|++||--+.++...+...+....|.+..|..+|+|+ ++.+.|..+++|.+.
T Consensus       261 t~a-i~~V~Ys~t~~lYvTaS---kDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyi-LsSG~DS~vkLWEi~  335 (430)
T KOG0640|consen  261 TGA-ITQVRYSSTGSLYVTAS---KDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYI-LSSGKDSTVKLWEIS  335 (430)
T ss_pred             ccc-eeEEEecCCccEEEEec---cCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEE-eecCCcceeeeeeec
Confidence            665 99999999999999999   7999999999888887777766667779999999999999 677899999999999


Q ss_pred             CCCCeeEEeeeee--CCCceeeEEEeeCceeEEeec
Q psy17682        380 AEPPFVHYINTFQ--TPDPQRGIGMMPKRGCDVNSC  413 (490)
Q Consensus       380 ~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~  413 (490)
                      +++++......-.  ....-+...|+....+++.-+
T Consensus       336 t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pD  371 (430)
T KOG0640|consen  336 TGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPD  371 (430)
T ss_pred             CCceEEEEecCCcccchhhhhhhhhcCccceEEccc
Confidence            9985544332100  011224445655555555443

>KOG1539|consensus

Probab=99.95  E-value=6.9e-26  Score=215.65  Aligned_cols=354  Identities=12%  Similarity=0.126  Sum_probs=265.2

Q ss_pred             CCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682         33 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST  112 (490)
Q Consensus        33 ~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (490)
                      ..+.++.++.-.+.|+.+.|.-+|+.++++|+..|.+-+||+.......                .....+.      ..
T Consensus       233 ~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~----------------v~~nah~------~s  290 (910)
T KOG1539|consen  233 FDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLIN----------------VTRNAHY------GS  290 (910)
T ss_pred             cCcEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeee----------------eeecccc------CC
Confidence            3456666766679999999999999999999999999999998754211                1111111      12


Q ss_pred             CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEE
Q psy17682        113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKV  192 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~i  192 (490)
                      +....+-+.     ..++.+++.|+.+++|-.+..    ....+..+.-.||..+-.|++|.-..+..+.+++.|++.+.
T Consensus       291 v~~~~fl~~-----epVl~ta~~DnSlk~~vfD~~----dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~  361 (910)
T KOG1539|consen  291 VTGATFLPG-----EPVLVTAGADNSLKVWVFDSG----DGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRS  361 (910)
T ss_pred             cccceecCC-----CceEeeccCCCceeEEEeeCC----CCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhh
Confidence            444444444     357888899999999987622    22244555667999999999998544589999999999888


Q ss_pred             EECCCCCc---------------cccc-----c-cc--------------------------------------eeee--
Q psy17682        193 WQIPDGGI---------------SRTL-----T-EP--------------------------------------VVDL--  211 (490)
Q Consensus       193 wd~~~~~~---------------~~~~-----~-~~--------------------------------------~~~~--  211 (490)
                      +++.....               ....     . .|                                      ...+  
T Consensus       362 fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~  441 (910)
T KOG1539|consen  362 FSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDP  441 (910)
T ss_pred             hhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecC
Confidence            87631100               0000     0 00                                      0001  


Q ss_pred             ---cccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE---ecCCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy17682        212 ---LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI---ECHPDIVYSASWNWDGSKLLTTCKDKKMRII  285 (490)
Q Consensus       212 ---~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  285 (490)
                         ......+++++.++.| |+.+.|...|.|.+|++++|-...++   ..|.++|++++...-++.+++++.+|.+++|
T Consensus       442 ~~~~~~~~~~~av~vs~CG-NF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw  520 (910)
T KOG1539|consen  442 KRFKKDDINATAVCVSFCG-NFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFW  520 (910)
T ss_pred             ccccccCcceEEEEEeccC-ceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEE
Confidence               1122568899999998 58999999999999999999888888   4799999999999888999999999999999


Q ss_pred             eCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEE
Q psy17682        286 NPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYL  365 (490)
Q Consensus       286 d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  365 (490)
                      |..+...+..+....  .+..+.++....+++.+.   .+-.|.++|..+.+-..  ...+|...|++++|||||++| +
T Consensus       521 ~f~~k~l~~~l~l~~--~~~~iv~hr~s~l~a~~~---ddf~I~vvD~~t~kvvR--~f~gh~nritd~~FS~DgrWl-i  592 (910)
T KOG1539|consen  521 DFKKKVLKKSLRLGS--SITGIVYHRVSDLLAIAL---DDFSIRVVDVVTRKVVR--EFWGHGNRITDMTFSPDGRWL-I  592 (910)
T ss_pred             ecCCcceeeeeccCC--Ccceeeeeehhhhhhhhc---CceeEEEEEchhhhhhH--HhhccccceeeeEeCCCCcEE-E
Confidence            999988877776433  388888888888888887   58889999998754322  233688899999999999999 7


Q ss_pred             EecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc-eeEEEEecCCCceEEE
Q psy17682        366 CGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE-IGRFFRLNNSGLCQVV  430 (490)
Q Consensus       366 ~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~~~~~~~~~~~~~~i  430 (490)
                      +++.|++|++||+.++.    .+..+.-..+..++.|||+|.+|++.-. ...+|-+.+..+...+
T Consensus       593 sasmD~tIr~wDlpt~~----lID~~~vd~~~~sls~SPngD~LAT~Hvd~~gIylWsNkslF~~v  654 (910)
T KOG1539|consen  593 SASMDSTIRTWDLPTGT----LIDGLLVDSPCTSLSFSPNGDFLATVHVDQNGIYLWSNKSLFKSV  654 (910)
T ss_pred             EeecCCcEEEEeccCcc----eeeeEecCCcceeeEECCCCCEEEEEEecCceEEEEEchhHheec
Confidence            89999999999999997    5666666779999999999999998843 3455555554433333

>KOG0264|consensus

Probab=99.95  E-value=2.3e-26  Score=205.07  Aligned_cols=256  Identities=15%  Similarity=0.251  Sum_probs=205.5

Q ss_pred             ecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc---cccceeeecccccCEEEEEEeeCCCCEEEEEeCCC
Q psy17682        162 GGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT---LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN  238 (490)
Q Consensus       162 ~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg  238 (490)
                      .-|.+.|+.+...|++.+++++.+..+.|.|||..+......   -..|...+.+|...-++++|++...-.|++++.|+
T Consensus       121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~  200 (422)
T KOG0264|consen  121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH  200 (422)
T ss_pred             ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence            369999999999999999999999999999999865433222   12566678899998899999998777899999999


Q ss_pred             cEEEEECCCCe-------eEEEEecCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCC--CCceeeeeeecCCCceeEEE
Q psy17682        239 NVAIWNVGTGE-------IMIQIECHPDIVYSASWNW-DGSKLLTTCKDKKMRIINPR--TGAIEEEAVCHEGSKATRAI  308 (490)
Q Consensus       239 ~v~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~  308 (490)
                      +|++||+....       +...+.+|...|..++|++ +..+|++++.|+.+.|||+|  +.++.....+|.+. +.+++
T Consensus       201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~-vn~~~  279 (422)
T KOG0264|consen  201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAE-VNCVA  279 (422)
T ss_pred             cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCc-eeEEE
Confidence            99999997432       3456779999999999999 55789999999999999999  45666666788775 99999


Q ss_pred             EeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC----
Q psy17682        309 YLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP----  383 (490)
Q Consensus       309 ~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~----  383 (490)
                      |+|- +.+||+|+   .|++|.+||+++...+.... .+|...|..+.|||....++++++.|+.+.|||+..-..    
T Consensus       280 fnp~~~~ilAT~S---~D~tV~LwDlRnL~~~lh~~-e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~  355 (422)
T KOG0264|consen  280 FNPFNEFILATGS---ADKTVALWDLRNLNKPLHTF-EGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSP  355 (422)
T ss_pred             eCCCCCceEEecc---CCCcEEEeechhcccCceec-cCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccCh
Confidence            9996 56778887   79999999999987755443 377788999999999999889999999999999974210    


Q ss_pred             ------eeEEeeeee-CCCceeeEEEeeCceeEEee---cceeEEEEec
Q psy17682        384 ------FVHYINTFQ-TPDPQRGIGMMPKRGCDVNS---CEIGRFFRLN  422 (490)
Q Consensus       384 ------~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~---~~~~~~~~~~  422 (490)
                            ..+.+-.+. |...|..+.|+|+..+++++   +..+.||+..
T Consensus       356 eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s  404 (422)
T KOG0264|consen  356 EDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA  404 (422)
T ss_pred             hhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence                  112222222 44679999999999887766   3366666655

>KOG1408|consensus

Probab=99.95  E-value=1.4e-25  Score=209.90  Aligned_cols=375  Identities=9%  Similarity=0.118  Sum_probs=254.8

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK  104 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (490)
                      ++-|+.+.+-.....++  +...+||+.+.   ++++.|..+|.|++++..+-....+..-. +..-..-.+........
T Consensus       243 LvEFSsRRLLDKWVqcR--TTnAnCIcVs~---r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~-halg~d~a~~~q~~~~~  316 (1080)
T KOG1408|consen  243 LVEFSSRRLLDKWVQCR--TTNANCICVSS---RLIACGCAKGMVRLFNPETLDYAGTLPRS-HALGSDTANLSQPEPKN  316 (1080)
T ss_pred             eeeechhhhhhhhhhhh--ccccceeeeec---ceEEEeeccceeeecCcchhhhccccccc-cccccchhhcccccccc
Confidence            44455444433333333  45567787775   77898999999999998875432221111 11101111111100011


Q ss_pred             CCCcccccCCe--eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCC-----
Q psy17682        105 GGANRNSTANE--ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHD-----  177 (490)
Q Consensus       105 ~~~~~~~~v~~--~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~-----  177 (490)
                      .+......-.+  +.|++.     ...+....++..+.||++.    ...+..+....+ .|...|+++.--|.+     
T Consensus       317 s~~~~a~fPD~IA~~Fdet-----~~klscVYndhSlYvWDvr----D~~kvgk~~s~l-yHS~ciW~Ve~~p~nv~~~~  386 (1080)
T KOG1408|consen  317 SESSPAIFPDAIACQFDET-----TDKLSCVYNDHSLYVWDVR----DVNKVGKCSSML-YHSACIWDVENLPCNVHSPT  386 (1080)
T ss_pred             cccCcccCCceeEEEecCC-----CceEEEEEcCceEEEEecc----ccccccceeeee-eccceeeeeccccccccCcc
Confidence            11112222223  334433     2455667889999999997    555555444443 688999998766521     


Q ss_pred             -----CCEEEEEeCCCcEEEEECCCCCcccccc------------------------------cceeeecccccCEEEEE
Q psy17682        178 -----DNVIASGSEDCVVKVWQIPDGGISRTLT------------------------------EPVVDLLYHQRRVGLVL  222 (490)
Q Consensus       178 -----~~~l~s~~~dg~i~iwd~~~~~~~~~~~------------------------------~~~~~~~~~~~~v~~~~  222 (490)
                           +..+.|++.|++||+|++..+..-..+.                              +...........+.+++
T Consensus       387 ~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~  466 (1080)
T KOG1408|consen  387 AACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALA  466 (1080)
T ss_pred             cccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEE
Confidence                 2369999999999999987521111100                              11111222445699999


Q ss_pred             EeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC---CCCEEEEEeCCCeEEEEeCCCC-ceeeeeee
Q psy17682        223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW---DGSKLLTTCKDKKMRIINPRTG-AIEEEAVC  298 (490)
Q Consensus       223 ~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~  298 (490)
                      .+|+++ .|++|..-|.++||++.+-+....+..|...|.|+.|+.   ..++|++++.|+.|++||+... .+++++.+
T Consensus       467 vSp~gq-hLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~  545 (1080)
T KOG1408|consen  467 VSPDGQ-HLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDG  545 (1080)
T ss_pred             ECCCcc-eecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcc
Confidence            999996 899999999999999999998899999999999999986   3478999999999999998642 23333333


Q ss_pred             cCCC------------------------------------------------ceeEEEEeCCCcEEEEEeCCCceeEEEE
Q psy17682        299 HEGS------------------------------------------------KATRAIYLKSGLIFTTGFSKMSERQYSL  330 (490)
Q Consensus       299 ~~~~------------------------------------------------~~~~~~~s~~~~~l~~~~~~~~~~~i~i  330 (490)
                      |...                                                .++.++..|..+++++++   .|+.|+|
T Consensus       546 HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~c---QDrniri  622 (1080)
T KOG1408|consen  546 HSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVC---QDRNIRI  622 (1080)
T ss_pred             cccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEe---cccceEE
Confidence            3221                                                246677777777888887   7999999


Q ss_pred             ecCCCCCCCeEEEecc-CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeE
Q psy17682        331 RAPDHLDEPIVMVELD-TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCD  409 (490)
Q Consensus       331 wd~~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l  409 (490)
                      |++.++++...++... +.+....+...|.|.|| ++.+.|.++.++|.-+++..   ..-+.|.+.|+++.|++|.+.+
T Consensus       623 f~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~-atScsdktl~~~Df~sgEcv---A~m~GHsE~VTG~kF~nDCkHl  698 (1080)
T KOG1408|consen  623 FDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYL-ATSCSDKTLCFVDFVSGECV---AQMTGHSEAVTGVKFLNDCKHL  698 (1080)
T ss_pred             EeccccceeeeecccccCCCceEEEEECCCccEE-EEeecCCceEEEEeccchhh---hhhcCcchheeeeeecccchhh
Confidence            9999988766665433 44568889999999999 78889999999999999842   2335677899999999999877


Q ss_pred             Eee--cceeEEEEecC
Q psy17682        410 VNS--CEIGRFFRLNN  423 (490)
Q Consensus       410 ~~~--~~~~~~~~~~~  423 (490)
                      ++.  ++.+-+|++..
T Consensus       699 ISvsgDgCIFvW~lp~  714 (1080)
T KOG1408|consen  699 ISVSGDGCIFVWKLPL  714 (1080)
T ss_pred             eeecCCceEEEEECch
Confidence            655  56778888764

>KOG0639|consensus

Probab=99.95  E-value=4.4e-26  Score=205.12  Aligned_cols=287  Identities=14%  Similarity=0.150  Sum_probs=223.9

Q ss_pred             cccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEec
Q psy17682         40 LLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITIS  119 (490)
Q Consensus        40 l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  119 (490)
                      ...|.+-|..+..+... ..++|||+ |.|+|||+.......                              .+..+   
T Consensus       415 tL~HGEvVcAvtIS~~t-rhVyTgGk-gcVKVWdis~pg~k~------------------------------PvsqL---  459 (705)
T KOG0639|consen  415 TLAHGEVVCAVTISNPT-RHVYTGGK-GCVKVWDISQPGNKS------------------------------PVSQL---  459 (705)
T ss_pred             hhccCcEEEEEEecCCc-ceeEecCC-CeEEEeeccCCCCCC------------------------------ccccc---
Confidence            44588889999998877 88999998 889999997632000                              00000   


Q ss_pred             cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682        120 EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG  199 (490)
Q Consensus       120 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~  199 (490)
                                                             -.+ .-...|.++.++||| +.|++|++-.++.|||+....
T Consensus       460 ---------------------------------------dcl-~rdnyiRSckL~pdg-rtLivGGeastlsiWDLAapT  498 (705)
T KOG0639|consen  460 ---------------------------------------DCL-NRDNYIRSCKLLPDG-RTLIVGGEASTLSIWDLAAPT  498 (705)
T ss_pred             ---------------------------------------ccc-CcccceeeeEecCCC-ceEEeccccceeeeeeccCCC
Confidence                                                   000 124578899999999 889999999999999997654


Q ss_pred             cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC
Q psy17682        200 ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD  279 (490)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  279 (490)
                      .....     .+......++.++.+||.+ +.+++..||.|.|||+.+...++.|++|...+.||..+++|..|.+|+-|
T Consensus       499 prika-----eltssapaCyALa~spDak-vcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlD  572 (705)
T KOG0639|consen  499 PRIKA-----ELTSSAPACYALAISPDAK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLD  572 (705)
T ss_pred             cchhh-----hcCCcchhhhhhhcCCccc-eeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCc
Confidence            32211     1333445688999999985 88999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCC
Q psy17682        280 KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPD  359 (490)
Q Consensus       280 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~  359 (490)
                      ++||.||++++..+....-.  ..|.++-+.|++.++++|-   ..+.+.+-.....+   ......|.+-|.++.|.+.
T Consensus       573 ntvRcWDlregrqlqqhdF~--SQIfSLg~cP~~dWlavGM---ens~vevlh~skp~---kyqlhlheScVLSlKFa~c  644 (705)
T KOG0639|consen  573 NTVRCWDLREGRQLQQHDFS--SQIFSLGYCPTGDWLAVGM---ENSNVEVLHTSKPE---KYQLHLHESCVLSLKFAYC  644 (705)
T ss_pred             cceeehhhhhhhhhhhhhhh--hhheecccCCCccceeeec---ccCcEEEEecCCcc---ceeecccccEEEEEEeccc
Confidence            99999999999876655422  2488999999999999998   56777776665443   3344456778999999999


Q ss_pred             CCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--eeEEEEe
Q psy17682        360 TNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--IGRFFRL  421 (490)
Q Consensus       360 ~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~~  421 (490)
                      |+++ ++.+.|+.+..|...-+..    +...+...+|.+...|-|.+++|+|++  ...+|.+
T Consensus       645 Gkwf-vStGkDnlLnawrtPyGas----iFqskE~SsVlsCDIS~ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  645 GKWF-VSTGKDNLLNAWRTPYGAS----IFQSKESSSVLSCDISFDDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             Ccee-eecCchhhhhhccCccccc----eeeccccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence            9998 7778999999999987763    222334468999999999999999866  3455543

>KOG1274|consensus

Probab=99.95  E-value=4.1e-25  Score=212.76  Aligned_cols=267  Identities=13%  Similarity=0.149  Sum_probs=218.2

Q ss_pred             ccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecc
Q psy17682         41 LYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISE  120 (490)
Q Consensus        41 ~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  120 (490)
                      .+|+..-+.|+|.|+| ..|++||.||.|++|+.....-                                         
T Consensus        10 yaht~G~t~i~~d~~g-efi~tcgsdg~ir~~~~~sd~e-----------------------------------------   47 (933)
T KOG1274|consen   10 YAHTGGLTLICYDPDG-EFICTCGSDGDIRKWKTNSDEE-----------------------------------------   47 (933)
T ss_pred             hhccCceEEEEEcCCC-CEEEEecCCCceEEeecCCccc-----------------------------------------
Confidence            5799999999999999 6999999999999997665310                                         


Q ss_pred             ccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCc
Q psy17682        121 DYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGI  200 (490)
Q Consensus       121 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~  200 (490)
                                                   ++       .++.-|...|.+++...   ++|++|+.+++|.+|.+.+++.
T Consensus        48 -----------------------------~P-------~ti~~~g~~v~~ia~~s---~~f~~~s~~~tv~~y~fps~~~   88 (933)
T KOG1274|consen   48 -----------------------------EP-------ETIDISGELVSSIACYS---NHFLTGSEQNTVLRYKFPSGEE   88 (933)
T ss_pred             -----------------------------CC-------chhhccCceeEEEeecc---cceEEeeccceEEEeeCCCCCc
Confidence                                         00       01112667888888763   6899999999999999988765


Q ss_pred             ccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCC
Q psy17682        201 SRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK  280 (490)
Q Consensus       201 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  280 (490)
                      -..+.       ...-++++++++-+|. +++.|+.|-.|++-++.+......+.+|.++|.++.|+|++++||+.+.||
T Consensus        89 ~~iL~-------Rftlp~r~~~v~g~g~-~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG  160 (933)
T KOG1274|consen   89 DTILA-------RFTLPIRDLAVSGSGK-MIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDG  160 (933)
T ss_pred             cceee-------eeeccceEEEEecCCc-EEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCc
Confidence            43332       2667899999999995 999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEeCCCCceeeeeeec-------CCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCcee
Q psy17682        281 KMRIINPRTGAIEEEAVCH-------EGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVM  352 (490)
Q Consensus       281 ~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~  352 (490)
                      .|++||+.++.+..++.+-       ....++.++|+|+ |.+++.+    .++.|++|+.........+..-.+...+.
T Consensus       161 ~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~----~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~  236 (933)
T KOG1274|consen  161 KVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPP----VDNTVKVYSRKGWELQFKLRDKLSSSKFS  236 (933)
T ss_pred             eEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeec----cCCeEEEEccCCceeheeecccccccceE
Confidence            9999999998877666521       1334788999999 5555555    59999999999988777666655656699


Q ss_pred             eeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCcee
Q psy17682        353 FPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGC  408 (490)
Q Consensus       353 ~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~  408 (490)
                      .+.|+|+|+|| |+++.||.|.|||+.+-.     .  +.....|.+++|.|++..
T Consensus       237 ~~~wsPnG~Yi-AAs~~~g~I~vWnv~t~~-----~--~~~~~~Vc~~aw~p~~n~  284 (933)
T KOG1274|consen  237 DLQWSPNGKYI-AASTLDGQILVWNVDTHE-----R--HEFKRAVCCEAWKPNANA  284 (933)
T ss_pred             EEEEcCCCcEE-eeeccCCcEEEEecccch-----h--ccccceeEEEecCCCCCe
Confidence            99999999999 789999999999999832     1  233457999999998754

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.95  E-value=4.3e-24  Score=199.21  Aligned_cols=248  Identities=10%  Similarity=0.073  Sum_probs=180.3

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG  246 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~  246 (490)
                      .+.+++|+|++..++++++.++.|++||..+++....+.       .+ ..+..++|+|+++.++++++.++.|++||++
T Consensus        32 ~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-------~~-~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~  103 (300)
T TIGR03866        32 RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLP-------SG-PDPELFALHPNGKILYIANEDDNLVTVIDIE  103 (300)
T ss_pred             CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEecc-------CC-CCccEEEECCCCCEEEEEcCCCCeEEEEECC
Confidence            356799999984445677889999999998877654432       12 2356789999986444555678999999999


Q ss_pred             CCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCce
Q psy17682        247 TGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK-KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSE  325 (490)
Q Consensus       247 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~  325 (490)
                      +++.+..+. +...+.+++|+|+++.+++++.++ .+.+||.++++.........  .+..+.|+|+|+.+++++.  .+
T Consensus       104 ~~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~--~~  178 (300)
T TIGR03866       104 TRKVLAEIP-VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQ--RPRFAEFTADGKELWVSSE--IG  178 (300)
T ss_pred             CCeEEeEee-CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCC--CccEEEECCCCCEEEEEcC--CC
Confidence            888877776 334578899999999999988765 57788998887665544322  3677899999998865542  47


Q ss_pred             eEEEEecCCCCCCCeEEEecc-----CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeE
Q psy17682        326 RQYSLRAPDHLDEPIVMVELD-----TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGI  400 (490)
Q Consensus       326 ~~i~iwd~~~~~~~~~~~~~~-----~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~  400 (490)
                      +.+++||+.+.+....+....     .......++|+|++++++++.+.++.+.+||+.+++.    ......+..+.++
T Consensus       179 ~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~----~~~~~~~~~~~~~  254 (300)
T TIGR03866       179 GTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEV----LDYLLVGQRVWQL  254 (300)
T ss_pred             CEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcE----EEEEEeCCCcceE
Confidence            899999999865433222110     0112346889999999867666677899999988762    2222334578999


Q ss_pred             EEeeCceeEEee---cceeEEEEecCCCceEEEE
Q psy17682        401 GMMPKRGCDVNS---CEIGRFFRLNNSGLCQVVS  431 (490)
Q Consensus       401 ~~sp~~~~l~~~---~~~~~~~~~~~~~~~~~i~  431 (490)
                      +|+|++..++++   ++.+.+|++.++..+..+.
T Consensus       255 ~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~  288 (300)
T TIGR03866       255 AFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIK  288 (300)
T ss_pred             EECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE
Confidence            999999988765   4589999999988556664

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0294|consensus

Probab=99.94  E-value=1.9e-24  Score=184.05  Aligned_cols=243  Identities=18%  Similarity=0.282  Sum_probs=194.5

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCC-CCEEEEEeC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTA-QNVLLTAGS  236 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~~l~s~~~  236 (490)
                      ...+..|.++|++++.+  + .++|+|+.|-+|+|||++.......+       ..|.+.|+++.|.+.- .+.|++|+.
T Consensus        36 lF~~~aH~~sitavAVs--~-~~~aSGssDetI~IYDm~k~~qlg~l-------l~HagsitaL~F~~~~S~shLlS~sd  105 (362)
T KOG0294|consen   36 LFAFSAHAGSITALAVS--G-PYVASGSSDETIHIYDMRKRKQLGIL-------LSHAGSITALKFYPPLSKSHLLSGSD  105 (362)
T ss_pred             cccccccccceeEEEec--c-eeEeccCCCCcEEEEeccchhhhcce-------eccccceEEEEecCCcchhheeeecC
Confidence            44567999999999998  4 89999999999999999988776653       3499999999998874 236899999


Q ss_pred             CCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEE
Q psy17682        237 DNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIF  316 (490)
Q Consensus       237 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  316 (490)
                      ||.|.+|+....+.+..+++|.+.|+.++.+|.+++-++.+.|+.+++||+-.|+....+.....  .+.+.|+|.|.++
T Consensus       106 DG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~--at~v~w~~~Gd~F  183 (362)
T KOG0294|consen  106 DGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNK--ATLVSWSPQGDHF  183 (362)
T ss_pred             CCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCc--ceeeEEcCCCCEE
Confidence            99999999999999999999999999999999999999999999999999999887665553332  5669999999988


Q ss_pred             EEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCc
Q psy17682        317 TTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDP  396 (490)
Q Consensus       317 ~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  396 (490)
                      +.+.    ...|-+|.+.+...   +........+.++.|- ++..| ++|..|+.|.+||..+..++...   ..|...
T Consensus       184 ~v~~----~~~i~i~q~d~A~v---~~~i~~~~r~l~~~~l-~~~~L-~vG~d~~~i~~~D~ds~~~~~~~---~AH~~R  251 (362)
T KOG0294|consen  184 VVSG----RNKIDIYQLDNASV---FREIENPKRILCATFL-DGSEL-LVGGDNEWISLKDTDSDTPLTEF---LAHENR  251 (362)
T ss_pred             EEEe----ccEEEEEecccHhH---hhhhhccccceeeeec-CCceE-EEecCCceEEEeccCCCccceee---ecchhh
Confidence            8886    56789998886542   2222223446666665 45566 67889999999999987644322   246678


Q ss_pred             eeeEEEe--eCceeEEee--cceeEEEEecCC
Q psy17682        397 QRGIGMM--PKRGCDVNS--CEIGRFFRLNNS  424 (490)
Q Consensus       397 i~~~~~s--p~~~~l~~~--~~~~~~~~~~~~  424 (490)
                      |.++.+-  |++.++++.  ++.+++|+++..
T Consensus       252 VK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~  283 (362)
T KOG0294|consen  252 VKDIASYTNPEHEYLVTASSDGFIKVWDIDME  283 (362)
T ss_pred             eeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence            9888854  567777765  668899999876

>KOG2106|consensus

Probab=99.94  E-value=9e-24  Score=190.53  Aligned_cols=349  Identities=11%  Similarity=0.107  Sum_probs=242.4

Q ss_pred             eeeeecc--CCCCCcEEeccccc-ceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeec
Q psy17682         24 RLTYFSP--RTLTEPVVDLLYHQ-RRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDK  100 (490)
Q Consensus        24 ~~~~~~~--~~~~~~~~~l~gH~-~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (490)
                      ++.||.+  ..+.+....+.++. .-|.|++|.++|+  ++||..+|.|.||+..+.++..+..                
T Consensus       223 H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engd--viTgDS~G~i~Iw~~~~~~~~k~~~----------------  284 (626)
T KOG2106|consen  223 HLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGD--VITGDSGGNILIWSKGTNRISKQVH----------------  284 (626)
T ss_pred             eEEEEEccCCceEEEeeccccccceEEEEEEEcCCCC--EEeecCCceEEEEeCCCceEEeEee----------------
Confidence            5778877  34566666677765 5699999999986  8899999999999997655332111                


Q ss_pred             ccCCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCccc---------------------------
Q psy17682        101 VGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGR---------------------------  153 (490)
Q Consensus       101 ~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~---------------------------  153 (490)
                       .+      +..|.+++.-.++      .+.+++.|..|..|+-........+                           
T Consensus       285 -aH------~ggv~~L~~lr~G------tllSGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~i  351 (626)
T KOG2106|consen  285 -AH------DGGVFSLCMLRDG------TLLSGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFI  351 (626)
T ss_pred             -ec------CCceEEEEEecCc------cEeecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceE
Confidence             11      1123333333332      2333555555555553221111111                           


Q ss_pred             ----CCC-CcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCC
Q psy17682        154 ----INA-DHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQ  228 (490)
Q Consensus       154 ----~~~-~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~  228 (490)
                          +.. -..+..+|.+..+.++.+|+. +.++|++.|+.+++|+  ..+......        -..++.|+.|+|.| 
T Consensus       352 L~Gt~~~~f~~~v~gh~delwgla~hps~-~q~~T~gqdk~v~lW~--~~k~~wt~~--------~~d~~~~~~fhpsg-  419 (626)
T KOG2106|consen  352 LQGTLENGFTLTVQGHGDELWGLATHPSK-NQLLTCGQDKHVRLWN--DHKLEWTKI--------IEDPAECADFHPSG-  419 (626)
T ss_pred             EEeeecCCceEEEEecccceeeEEcCCCh-hheeeccCcceEEEcc--CCceeEEEE--------ecCceeEeeccCcc-
Confidence                111 123456899999999999987 8999999999999999  333333211        46788999999998 


Q ss_pred             CEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-ceeeeeeecCCCceeEE
Q psy17682        229 NVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTG-AIEEEAVCHEGSKATRA  307 (490)
Q Consensus       229 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~  307 (490)
                       .++.|...|...+.|.++...+..-.. ..++++++|+|+|.+||.|+.|+.|+||.+... ........+.+.+++.+
T Consensus       420 -~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithL  497 (626)
T KOG2106|consen  420 -VVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHL  497 (626)
T ss_pred             -eEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEe
Confidence             799999999999999998766665554 889999999999999999999999999998754 44444444455779999


Q ss_pred             EEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEE--------------ec--cCCCceeeeeecCCCCeEEEEecCCC
Q psy17682        308 IYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMV--------------EL--DTSNGVMFPLYDPDTNLVYLCGKGDS  371 (490)
Q Consensus       308 ~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~--------------~~--~~~~~i~~~~~s~~~~~l~~~g~~dg  371 (490)
                      .|++|++++.+-+   .|..|-.|....-.......              .+  .+...+..++-+.+.+.+ ++|...|
T Consensus       498 DwS~Ds~~~~~~S---~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~l-A~gdd~g  573 (626)
T KOG2106|consen  498 DWSSDSQFLVSNS---GDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLL-ASGDDFG  573 (626)
T ss_pred             eecCCCceEEecc---CceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhh-hccccCc
Confidence            9999999999887   68899999544322111111              11  122335666667777777 8999999


Q ss_pred             eEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--eeEEEEe
Q psy17682        372 VIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--IGRFFRL  421 (490)
Q Consensus       372 ~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~~  421 (490)
                      +|++|...-.++.....+...+...|++++|+-+...+++.+.  .+-.|++
T Consensus       574 ~v~lf~yPc~s~rA~~he~~ghs~~vt~V~Fl~~d~~li~tg~D~Si~qW~l  625 (626)
T KOG2106|consen  574 KVHLFSYPCSSPRAPSHEYGGHSSHVTNVAFLCKDSHLISTGKDTSIMQWRL  625 (626)
T ss_pred             eEEEEccccCCCcccceeeccccceeEEEEEeeCCceEEecCCCceEEEEEe
Confidence            9999998766543333333346678999999998888777654  3344543

>KOG2055|consensus

Probab=99.94  E-value=4e-25  Score=197.21  Aligned_cols=292  Identities=13%  Similarity=0.202  Sum_probs=225.0

Q ss_pred             cceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccc
Q psy17682         44 QRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYV  123 (490)
Q Consensus        44 ~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  123 (490)
                      .+.|++|.|+|.. .+|++||.||+++|+.+.....                                            
T Consensus       213 ~~~I~sv~FHp~~-plllvaG~d~~lrifqvDGk~N--------------------------------------------  247 (514)
T KOG2055|consen  213 HGGITSVQFHPTA-PLLLVAGLDGTLRIFQVDGKVN--------------------------------------------  247 (514)
T ss_pred             cCCceEEEecCCC-ceEEEecCCCcEEEEEecCccC--------------------------------------------
Confidence            4689999999988 8999999999999997765320                                            


Q ss_pred             cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc
Q psy17682        124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT  203 (490)
Q Consensus       124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~  203 (490)
                                                      ..++.+.--..+|.+.+|.|+|...+++++....+..||+.+.+..+.
T Consensus       248 --------------------------------~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~  295 (514)
T KOG2055|consen  248 --------------------------------PKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKL  295 (514)
T ss_pred             --------------------------------hhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccccc
Confidence                                            011122223568999999999966999999999999999988876442


Q ss_pred             cccceeeecccc-cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeE
Q psy17682        204 LTEPVVDLLYHQ-RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM  282 (490)
Q Consensus       204 ~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  282 (490)
                       ..    ..++. ..+.....+|++. +|+..|..|.|.+....+++.+..++ ..+.|..++|+.+++.|++++.+|.|
T Consensus       296 -~~----~~g~e~~~~e~FeVShd~~-fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV  368 (514)
T KOG2055|consen  296 -KP----PYGVEEKSMERFEVSHDSN-FIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGEV  368 (514)
T ss_pred             -cC----CCCcccchhheeEecCCCC-eEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCceE
Confidence             11    33333 4678888999995 99999999999999999999999998 57889999999999999999999999


Q ss_pred             EEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC---CCCeEEEec-cCCCceeeeeecC
Q psy17682        283 RIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL---DEPIVMVEL-DTSNGVMFPLYDP  358 (490)
Q Consensus       283 ~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~---~~~~~~~~~-~~~~~i~~~~~s~  358 (490)
                      ++||++...++..+....+-.-+.++.+++|.+||+|+   ..|.|.|||..+.   ..|..+..+ .-...|+++.|++
T Consensus       369 ~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS---~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~  445 (514)
T KOG2055|consen  369 YVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGS---DSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNH  445 (514)
T ss_pred             EEEecCCcceEEEEeecCccceeeeeecCCCceEEecc---CcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCc
Confidence            99999999999998866654567888899999999999   6899999996642   222222222 2245699999999


Q ss_pred             CCCeEEEEe-cCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--eeEEEEec
Q psy17682        359 DTNLVYLCG-KGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--IGRFFRLN  422 (490)
Q Consensus       359 ~~~~l~~~g-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~~~  422 (490)
                      |++.|+++. ..+..+++-.+.+...+...-..-..-+.+++++|||.+.+++.|.+  .+.+|+|.
T Consensus       446 d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  446 DAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH  512 (514)
T ss_pred             chhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence            999984433 24578999998876522221111122257999999999999998855  66778764

>KOG0641|consensus

Probab=99.94  E-value=2.7e-24  Score=174.65  Aligned_cols=259  Identities=15%  Similarity=0.231  Sum_probs=193.1

Q ss_pred             cccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCC-CcccccCCeeEe
Q psy17682         40 LLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGG-ANRNSTANEITI  118 (490)
Q Consensus        40 l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~  118 (490)
                      -+.|.++|.|.+|+|.| .++++|+.|++|++-.........                   .++.-+ .-+...++.++|
T Consensus        85 ~khhkgsiyc~~ws~~g-eliatgsndk~ik~l~fn~dt~~~-------------------~g~dle~nmhdgtirdl~f  144 (350)
T KOG0641|consen   85 NKHHKGSIYCTAWSPCG-ELIATGSNDKTIKVLPFNADTCNA-------------------TGHDLEFNMHDGTIRDLAF  144 (350)
T ss_pred             ccccCccEEEEEecCcc-CeEEecCCCceEEEEecccccccc-------------------cCcceeeeecCCceeeeEE
Confidence            45699999999999999 899999999999997665432100                   011111 112346778888


Q ss_pred             ccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEE-ECCCCCCEEEEEeCCCcEEEEECCC
Q psy17682        119 SEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIA-WSPHDDNVIASGSEDCVVKVWQIPD  197 (490)
Q Consensus       119 s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~-~~p~~~~~l~s~~~dg~i~iwd~~~  197 (490)
                      -.+....-.-++..+.++..|.+-+..        .....+.+.||++.|.++. |+  | -++++|+.|.+|++||++-
T Consensus       145 ld~~~s~~~il~s~gagdc~iy~tdc~--------~g~~~~a~sghtghilalyswn--~-~m~~sgsqdktirfwdlrv  213 (350)
T KOG0641|consen  145 LDDPESGGAILASAGAGDCKIYITDCG--------RGQGFHALSGHTGHILALYSWN--G-AMFASGSQDKTIRFWDLRV  213 (350)
T ss_pred             ecCCCcCceEEEecCCCcceEEEeecC--------CCCcceeecCCcccEEEEEEec--C-cEEEccCCCceEEEEeeec
Confidence            655433322333344445555555542        2345678899999999884 55  5 8999999999999999998


Q ss_pred             CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe
Q psy17682        198 GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC  277 (490)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  277 (490)
                      ..++..+......-.-..+.|.+++..|.|+ +|++|-.|....+||++.+.+++.+..|...|.++.|+|...++++++
T Consensus       214 ~~~v~~l~~~~~~~glessavaav~vdpsgr-ll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~s  292 (350)
T KOG0641|consen  214 NSCVNTLDNDFHDGGLESSAVAAVAVDPSGR-LLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCS  292 (350)
T ss_pred             cceeeeccCcccCCCcccceeEEEEECCCcc-eeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEec
Confidence            8777766542211111346799999999996 999999999999999999999999999999999999999999999999


Q ss_pred             CCCeEEEEeCCCC---c-eeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCC
Q psy17682        278 KDKKMRIINPRTG---A-IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPD  334 (490)
Q Consensus       278 ~dg~i~iwd~~~~---~-~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~  334 (490)
                      .|..|++-|+...   + ++.....|... ...+.|+|..--+++.+   .|.++.+|-+.
T Consensus       293 yd~~ikltdlqgdla~el~~~vv~ehkdk-~i~~rwh~~d~sfisss---adkt~tlwa~~  349 (350)
T KOG0641|consen  293 YDMKIKLTDLQGDLAHELPIMVVAEHKDK-AIQCRWHPQDFSFISSS---ADKTATLWALN  349 (350)
T ss_pred             ccceEEEeecccchhhcCceEEEEeccCc-eEEEEecCccceeeecc---CcceEEEeccC
Confidence            9999999998742   1 22333355554 77889999988777777   68999999754

>KOG0294|consensus

Probab=99.94  E-value=1e-24  Score=185.66  Aligned_cols=267  Identities=16%  Similarity=0.277  Sum_probs=201.8

Q ss_pred             hhhHhhheeeeeeeccC----CCC----CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCcc
Q psy17682         15 ADEWFAVLFRLTYFSPR----TLT----EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSK   86 (490)
Q Consensus        15 ~~~~~~~~~~~~~~~~~----~~~----~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~   86 (490)
                      ...|...++-+..-.++    ..-    .++..+..|.++|++++.+-   .++||||.|-+|+|+|++...        
T Consensus         6 vGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs~---~~~aSGssDetI~IYDm~k~~--------   74 (362)
T KOG0294|consen    6 VGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVSG---PYVASGSSDETIHIYDMRKRK--------   74 (362)
T ss_pred             EeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEecc---eeEeccCCCCcEEEEeccchh--------
Confidence            34444555555443333    222    34777889999999999874   889999999999999998743        


Q ss_pred             ccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccC
Q psy17682         87 SALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKG  166 (490)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~  166 (490)
                                                                                            +...+-.|.+
T Consensus        75 ----------------------------------------------------------------------qlg~ll~Hag   84 (362)
T KOG0294|consen   75 ----------------------------------------------------------------------QLGILLSHAG   84 (362)
T ss_pred             ----------------------------------------------------------------------hhcceecccc
Confidence                                                                                  1113457999


Q ss_pred             CeeEEEECCCC-CCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEEC
Q psy17682        167 PVLDIAWSPHD-DNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNV  245 (490)
Q Consensus       167 ~V~~~~~~p~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~  245 (490)
                      .|+++.|.+.- .+.|++|++||.|.+|+.....++..       +.+|.+.|+.++.+|.++ +.++.+.|+.++.||+
T Consensus        85 sitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~s-------lK~H~~~Vt~lsiHPS~K-LALsVg~D~~lr~WNL  156 (362)
T KOG0294|consen   85 SITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKS-------LKAHKGQVTDLSIHPSGK-LALSVGGDQVLRTWNL  156 (362)
T ss_pred             ceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeee-------ecccccccceeEecCCCc-eEEEEcCCceeeeehh
Confidence            99999998753 23899999999999999988876665       556999999999999996 8889999999999999


Q ss_pred             CCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCce
Q psy17682        246 GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSE  325 (490)
Q Consensus       246 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~  325 (490)
                      -.|+.-..++ -....+.+.|+|.|.+++.+.. ..|-+|.+.+.+....+...  ..+.++.|...+.++ +|.   .+
T Consensus       157 V~Gr~a~v~~-L~~~at~v~w~~~Gd~F~v~~~-~~i~i~q~d~A~v~~~i~~~--~r~l~~~~l~~~~L~-vG~---d~  228 (362)
T KOG0294|consen  157 VRGRVAFVLN-LKNKATLVSWSPQGDHFVVSGR-NKIDIYQLDNASVFREIENP--KRILCATFLDGSELL-VGG---DN  228 (362)
T ss_pred             hcCccceeec-cCCcceeeEEcCCCCEEEEEec-cEEEEEecccHhHhhhhhcc--ccceeeeecCCceEE-Eec---CC
Confidence            9888665554 2334455999999999888886 46899998887766655433  236677776555554 555   47


Q ss_pred             eEEEEecCCCCCCCeEEEeccCCCceeeeee--cCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        326 RQYSLRAPDHLDEPIVMVELDTSNGVMFPLY--DPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       326 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~--s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      +.|.+||.+....+  .....|...|-.+.+  .|++.+| ++.+.||.|++||++..
T Consensus       229 ~~i~~~D~ds~~~~--~~~~AH~~RVK~i~~~~~~~~~~l-vTaSSDG~I~vWd~~~~  283 (362)
T KOG0294|consen  229 EWISLKDTDSDTPL--TEFLAHENRVKDIASYTNPEHEYL-VTASSDGFIKVWDIDME  283 (362)
T ss_pred             ceEEEeccCCCccc--eeeecchhheeeeEEEecCCceEE-EEeccCceEEEEEcccc
Confidence            99999999974432  233467788888763  4566666 89999999999999876

>KOG1036|consensus

Probab=99.94  E-value=1.2e-24  Score=184.98  Aligned_cols=270  Identities=12%  Similarity=0.181  Sum_probs=205.9

Q ss_pred             cccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCc
Q psy17682        110 NSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCV  189 (490)
Q Consensus       110 ~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~  189 (490)
                      ...|.++.|+|..     ..+.++++||.+++|+....         .....-.|..++.+++|.+  ...+++|+.||.
T Consensus        13 ~d~IS~v~f~~~~-----~~LLvssWDgslrlYdv~~~---------~l~~~~~~~~plL~c~F~d--~~~~~~G~~dg~   76 (323)
T KOG1036|consen   13 EDGISSVKFSPSS-----SDLLVSSWDGSLRLYDVPAN---------SLKLKFKHGAPLLDCAFAD--ESTIVTGGLDGQ   76 (323)
T ss_pred             hhceeeEEEcCcC-----CcEEEEeccCcEEEEeccch---------hhhhheecCCceeeeeccC--CceEEEeccCce
Confidence            3468888898663     45666779999999998622         2223346899999999997  368999999999


Q ss_pred             EEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCC
Q psy17682        190 VKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWD  269 (490)
Q Consensus       190 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~  269 (490)
                      |+.+|+.++....        +..|..+|.|+.+++.. ..+++|+.|++|++||.+.......+. ....|.++..+  
T Consensus        77 vr~~Dln~~~~~~--------igth~~~i~ci~~~~~~-~~vIsgsWD~~ik~wD~R~~~~~~~~d-~~kkVy~~~v~--  144 (323)
T KOG1036|consen   77 VRRYDLNTGNEDQ--------IGTHDEGIRCIEYSYEV-GCVISGSWDKTIKFWDPRNKVVVGTFD-QGKKVYCMDVS--  144 (323)
T ss_pred             EEEEEecCCccee--------eccCCCceEEEEeeccC-CeEEEcccCccEEEEeccccccccccc-cCceEEEEecc--
Confidence            9999998876543        34499999999999876 489999999999999999866666665 34589988876  


Q ss_pred             CCEEEEEeCCCeEEEEeCCCCceeeeee-ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC----CCCeEEEe
Q psy17682        270 GSKLLTTCKDKKMRIINPRTGAIEEEAV-CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL----DEPIVMVE  344 (490)
Q Consensus       270 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~----~~~~~~~~  344 (490)
                      ++.|++|+.|..+.+||+++.....+.. ..-...+.++++-|++.-+++++   .+|.|.+=.++..    .....+..
T Consensus       145 g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sS---ieGRVavE~~d~s~~~~skkyaFkC  221 (323)
T KOG1036|consen  145 GNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSS---IEGRVAVEYFDDSEEAQSKKYAFKC  221 (323)
T ss_pred             CCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEe---ecceEEEEccCCchHHhhhceeEEe
Confidence            7889999999999999999876443222 22233588999999877777777   6888888766654    22222221


Q ss_pred             cc-------CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc
Q psy17682        345 LD-------TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       345 ~~-------~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  414 (490)
                      ..       ..-+|++++|+|--+.+ +||+.||.|.+||+.+.+.+ ..+..+  ...|.+++|+.+|.+|+.+++
T Consensus       222 Hr~~~~~~~~~yPVNai~Fhp~~~tf-aTgGsDG~V~~Wd~~~rKrl-~q~~~~--~~SI~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  222 HRLSEKDTEIIYPVNAIAFHPIHGTF-ATGGSDGIVNIWDLFNRKRL-KQLAKY--ETSISSLSFSMDGSLLAIASS  294 (323)
T ss_pred             eecccCCceEEEEeceeEeccccceE-EecCCCceEEEccCcchhhh-hhccCC--CCceEEEEeccCCCeEEEEec
Confidence            11       01248899999997777 89999999999999998733 223222  357999999999999998866

>KOG0300|consensus

Probab=99.94  E-value=9.9e-26  Score=191.86  Aligned_cols=250  Identities=17%  Similarity=0.299  Sum_probs=212.2

Q ss_pred             CcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC
Q psy17682        157 DHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS  236 (490)
Q Consensus       157 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~  236 (490)
                      ..+.+.||++.|+.++..... .++.+++.|.+.+||.++++.++..       +.+|.+.|.+++|++.+. ++++++.
T Consensus       140 lvre~~GHkDGiW~Vaa~~tq-pi~gtASADhTA~iWs~Esg~CL~~-------Y~GH~GSVNsikfh~s~~-L~lTaSG  210 (481)
T KOG0300|consen  140 LVRELEGHKDGIWHVAADSTQ-PICGTASADHTARIWSLESGACLAT-------YTGHTGSVNSIKFHNSGL-LLLTASG  210 (481)
T ss_pred             ehhhhcccccceeeehhhcCC-cceeecccccceeEEeeccccceee-------ecccccceeeEEeccccc-eEEEccC
Confidence            345678999999999988754 7999999999999999999998776       456999999999999985 9999999


Q ss_pred             CCcEEEEEC------CC----------------------------------CeeEEEEecCCCcEEEEEEcCCCCEEEEE
Q psy17682        237 DNNVAIWNV------GT----------------------------------GEIMIQIECHPDIVYSASWNWDGSKLLTT  276 (490)
Q Consensus       237 dg~v~iwd~------~~----------------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  276 (490)
                      |++..||..      ..                                  ..++..+.+|...|.+..|-..|+.++++
T Consensus       211 D~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTa  290 (481)
T KOG0300|consen  211 DETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTA  290 (481)
T ss_pred             CcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeee
Confidence            999999962      00                                  12566788999999999999999999999


Q ss_pred             eCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeee
Q psy17682        277 CKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLY  356 (490)
Q Consensus       277 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~  356 (490)
                      +.|++..+||+++++++..+.+|... .+.+.-+|..+++++++   .|.+.++||++..-.... ...+|...|+++.|
T Consensus       291 SWDRTAnlwDVEtge~v~~LtGHd~E-LtHcstHptQrLVvTsS---rDtTFRLWDFReaI~sV~-VFQGHtdtVTS~vF  365 (481)
T KOG0300|consen  291 SWDRTANLWDVETGEVVNILTGHDSE-LTHCSTHPTQRLVVTSS---RDTTFRLWDFREAIQSVA-VFQGHTDTVTSVVF  365 (481)
T ss_pred             eccccceeeeeccCceeccccCcchh-ccccccCCcceEEEEec---cCceeEeccchhhcceee-eecccccceeEEEE
Confidence            99999999999999999999999886 88889999999999998   799999999995433222 33478888999999


Q ss_pred             cCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCC
Q psy17682        357 DPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSG  425 (490)
Q Consensus       357 s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~  425 (490)
                      .-+.+.  ++|+.|.+|++||+++...   .+.......+++.++.+..+..++.-  ...+|+|++....
T Consensus       366 ~~dd~v--VSgSDDrTvKvWdLrNMRs---plATIRtdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~R  431 (481)
T KOG0300|consen  366 NTDDRV--VSGSDDRTVKVWDLRNMRS---PLATIRTDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNR  431 (481)
T ss_pred             ecCCce--eecCCCceEEEeeeccccC---cceeeecCCccceeEeecCCceEEeccCCceEEEEecCCCc
Confidence            987765  5899999999999998763   45555667799999999998887766  4488999998876

>KOG1273|consensus

Probab=99.94  E-value=1.3e-24  Score=184.93  Aligned_cols=298  Identities=11%  Similarity=0.139  Sum_probs=224.3

Q ss_pred             CCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccc
Q psy17682         32 TLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNS  111 (490)
Q Consensus        32 ~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (490)
                      ..++.+.....|.. -+|+.|++.| .+||.|..||.|.|||+.+-.                                 
T Consensus        12 ~~PEel~~tld~~~-a~~~~Fs~~G-~~lAvGc~nG~vvI~D~~T~~---------------------------------   56 (405)
T KOG1273|consen   12 EYPEELTHTLDNPL-AECCQFSRWG-DYLAVGCANGRVVIYDFDTFR---------------------------------   56 (405)
T ss_pred             cChHhhceeccCCc-cceEEeccCc-ceeeeeccCCcEEEEEccccc---------------------------------
Confidence            44555555555555 8999999999 999999999999999998732                                 


Q ss_pred             cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEE
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVK  191 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~  191 (490)
                                                                   .-+++.+|..+|.+++|+++| +.|+|++.|..|.
T Consensus        57 ---------------------------------------------iar~lsaH~~pi~sl~WS~dg-r~LltsS~D~si~   90 (405)
T KOG1273|consen   57 ---------------------------------------------IARMLSAHVRPITSLCWSRDG-RKLLTSSRDWSIK   90 (405)
T ss_pred             ---------------------------------------------hhhhhhccccceeEEEecCCC-CEeeeecCCceeE
Confidence                                                         112456899999999999999 8999999999999


Q ss_pred             EEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecC----CCcEEEEEEc
Q psy17682        192 VWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH----PDIVYSASWN  267 (490)
Q Consensus       192 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~  267 (490)
                      +||+..|.+++.+.        ..++|+.+.|+|...+..++.-.+..-.+-++..++....-...    .....+..|.
T Consensus        91 lwDl~~gs~l~rir--------f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fd  162 (405)
T KOG1273|consen   91 LWDLLKGSPLKRIR--------FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFD  162 (405)
T ss_pred             EEeccCCCceeEEE--------ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCcccccccccccccc
Confidence            99999998877654        67899999999998877777766666666666553321111111    1112334688


Q ss_pred             CCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeE---E--
Q psy17682        268 WDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIV---M--  342 (490)
Q Consensus       268 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~---~--  342 (490)
                      +.|+++++|...|.+.++|..+.+++..++...-..+..+.++..|+.|+.-+   .|+.|+.|+++.......   .  
T Consensus       163 r~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNt---sDRvIR~ye~~di~~~~r~~e~e~  239 (405)
T KOG1273|consen  163 RRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINT---SDRVIRTYEISDIDDEGRDGEVEP  239 (405)
T ss_pred             CCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEec---CCceEEEEehhhhcccCccCCcCh
Confidence            99999999999999999999999999888866534589999999999999988   799999999874221100   0  


Q ss_pred             ----EeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-cceeE
Q psy17682        343 ----VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-CEIGR  417 (490)
Q Consensus       343 ----~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~  417 (490)
                          +..-....-.+++||.+|.|++++...-..++||.-..|. +++.+...+ ++....+.|+|-...+++- .+.++
T Consensus       240 ~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~Gs-LVKILhG~k-gE~l~DV~whp~rp~i~si~sg~v~  317 (405)
T KOG1273|consen  240 EHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGS-LVKILHGTK-GEELLDVNWHPVRPIIASIASGVVY  317 (405)
T ss_pred             hHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcc-eeeeecCCc-hhheeecccccceeeeeeccCCceE
Confidence                0001112245789999999997766677899999999987 445554322 2467889999998887776 55788


Q ss_pred             EEEecC
Q psy17682        418 FFRLNN  423 (490)
Q Consensus       418 ~~~~~~  423 (490)
                      +|....
T Consensus       318 iw~~~~  323 (405)
T KOG1273|consen  318 IWAVVQ  323 (405)
T ss_pred             EEEeec
Confidence            888654

>KOG0308|consensus

Probab=99.94  E-value=2.1e-25  Score=206.82  Aligned_cols=305  Identities=14%  Similarity=0.175  Sum_probs=234.7

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      +.....+..|.+.|+.+....++ +.|+|||.|-+|++|+...+.                                   
T Consensus        63 ~~~~asme~HsDWVNDiiL~~~~-~tlIS~SsDtTVK~W~~~~~~-----------------------------------  106 (735)
T KOG0308|consen   63 TPYIASMEHHSDWVNDIILCGNG-KTLISASSDTTVKVWNAHKDN-----------------------------------  106 (735)
T ss_pred             cchhhhhhhhHhHHhhHHhhcCC-CceEEecCCceEEEeecccCc-----------------------------------
Confidence            34588899999999999999988 799999999999999887532                                   


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEE-CCCCCCEEEEEeCCCcEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAW-SPHDDNVIASGSEDCVVKV  192 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~-~p~~~~~l~s~~~dg~i~i  192 (490)
                                                               ..+..++..|++.|.|++. .++. .++|+||-|+.|.+
T Consensus       107 -----------------------------------------~~c~stir~H~DYVkcla~~ak~~-~lvaSgGLD~~Ifl  144 (735)
T KOG0308|consen  107 -----------------------------------------TFCMSTIRTHKDYVKCLAYIAKNN-ELVASGGLDRKIFL  144 (735)
T ss_pred             -----------------------------------------chhHhhhhcccchheeeeecccCc-eeEEecCCCccEEE
Confidence                                                     0023356789999999999 5555 89999999999999


Q ss_pred             EECCCC--Cccccccc-ceeeec-ccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC
Q psy17682        193 WQIPDG--GISRTLTE-PVVDLL-YHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW  268 (490)
Q Consensus       193 wd~~~~--~~~~~~~~-~~~~~~-~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~  268 (490)
                      ||+.++  +.+..+.. +...+. ++..+|++++-++.| .++++|+..+.+++||.++++.+..+++|...|..+..++
T Consensus       145 WDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~-t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~d  223 (735)
T KOG0308|consen  145 WDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTG-TIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVND  223 (735)
T ss_pred             EEccCcchhhhhhccccccccCCCCCccceeeeecCCcc-eEEEecCcccceEEeccccccceeeeeccccceEEEEEcC
Confidence            999987  33333322 223344 789999999999999 5999999999999999999999999999999999999999


Q ss_pred             CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC
Q psy17682        269 DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS  348 (490)
Q Consensus       269 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~  348 (490)
                      ||+.+++++.||+|++||++..+++.++..|... +.++..+|+=..+.+|+   +++.|..=|+++......+.  ...
T Consensus       224 DGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~-VWaL~~~~sf~~vYsG~---rd~~i~~Tdl~n~~~~tlic--k~d  297 (735)
T KOG0308|consen  224 DGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEG-VWALQSSPSFTHVYSGG---RDGNIYRTDLRNPAKSTLIC--KED  297 (735)
T ss_pred             CCCeEeecCCCceEEeeeccccceeeeEEeccCc-eEEEeeCCCcceEEecC---CCCcEEecccCCchhheEee--cCC
Confidence            9999999999999999999999999999999987 99999999988999998   79999999998854333322  233


Q ss_pred             CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe-----------------eE----EeeeeeCCCceeeEEEeeCce
Q psy17682        349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF-----------------VH----YINTFQTPDPQRGIGMMPKRG  407 (490)
Q Consensus       349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~-----------------~~----~~~~~~~~~~i~~~~~sp~~~  407 (490)
                      .+|..+..+...+-+ -+++.|+.|+-|...-.-++                 ..    .-....++.+|..-+...|.+
T Consensus       298 aPv~~l~~~~~~~~~-WvtTtds~I~rW~~~~~~~l~~s~~~~~~~T~~~~~~~~~~~tp~~vi~Gg~ai~k~~mL~dkR  376 (735)
T KOG0308|consen  298 APVLKLHLHEHDNSV-WVTTTDSSIKRWKLEPDIALSVSGDLDFFSTDSNNHSCDLTNTPDSVIPGGAAIKKHAMLNDKR  376 (735)
T ss_pred             CchhhhhhccccCCc-eeeeccccceecCCccccccccCCCCCcccccCCCccccccCCCceeccCchhhhhhhhhcCcc
Confidence            456666666444444 24567888888876422100                 00    000112233445555566777


Q ss_pred             eEEeec--ceeEEEEecCC
Q psy17682        408 CDVNSC--EIGRFFRLNNS  424 (490)
Q Consensus       408 ~l~~~~--~~~~~~~~~~~  424 (490)
                      .+++-+  +.+.+|++...
T Consensus       377 hVlTkDa~gnv~lwDIl~~  395 (735)
T KOG0308|consen  377 HVLTKDAKGNVALWDILAC  395 (735)
T ss_pred             eEeeecCCCCEEEEEeeee
Confidence            777764  47788887653

>KOG0299|consensus

Probab=99.94  E-value=7.9e-25  Score=195.35  Aligned_cols=256  Identities=17%  Similarity=0.231  Sum_probs=213.1

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccc-cc---------ceeee-cccccCEEEEEEeeC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL-TE---------PVVDL-LYHQRRVGLVLWHPT  226 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~---------~~~~~-~~~~~~v~~~~~~p~  226 (490)
                      ++.+..|.-+|.||+++|++ .+.++++.||+|.-|++.+++....+ ..         |...- .+|...+.+++.+++
T Consensus       135 ~~~~~~H~~s~~~vals~d~-~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~D  213 (479)
T KOG0299|consen  135 FRVIGKHQLSVTSVALSPDD-KRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSD  213 (479)
T ss_pred             ceeeccccCcceEEEeeccc-cceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCC
Confidence            55678899999999999998 89999999999999999988754211 11         11111 378889999999999


Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeE
Q psy17682        227 AQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATR  306 (490)
Q Consensus       227 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  306 (490)
                      ++ +|++|+.|..|.||+.++.+.+..+.+|.+.|.+++|-.....+++++.|+++++|++.....+.++.+|... +..
T Consensus       214 gk-ylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~-v~~  291 (479)
T KOG0299|consen  214 GK-YLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDG-VLG  291 (479)
T ss_pred             Cc-EEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccc-eee
Confidence            96 9999999999999999999999999999999999999987789999999999999999999999999999986 888


Q ss_pred             EEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeE
Q psy17682        307 AIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVH  386 (490)
Q Consensus       307 ~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~  386 (490)
                      +....-++.+.+|.   .|+++++|++....   .....++...+-+++|-.+..+  ++|+.+|.|.+|++...+|+..
T Consensus       292 IdaL~reR~vtVGg---rDrT~rlwKi~ees---qlifrg~~~sidcv~~In~~Hf--vsGSdnG~IaLWs~~KKkplf~  363 (479)
T KOG0299|consen  292 IDALSRERCVTVGG---RDRTVRLWKIPEES---QLIFRGGEGSIDCVAFINDEHF--VSGSDNGSIALWSLLKKKPLFT  363 (479)
T ss_pred             echhcccceEEecc---ccceeEEEeccccc---eeeeeCCCCCeeeEEEecccce--eeccCCceEEEeeecccCceeE
Confidence            88888888898887   79999999995432   2233356678899999877665  4899999999999999887644


Q ss_pred             Eeeeee---------CCCceeeEEEeeCceeEEee--cceeEEEEecCC
Q psy17682        387 YINTFQ---------TPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNS  424 (490)
Q Consensus       387 ~~~~~~---------~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~  424 (490)
                      ....+.         ++..|++++..|...++++|  ++.+|+|.+.++
T Consensus       364 ~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g  412 (479)
T KOG0299|consen  364 SRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDG  412 (479)
T ss_pred             eeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCC
Confidence            332221         11278999999999999988  468999999988

>KOG1332|consensus

Probab=99.94  E-value=3.5e-25  Score=181.92  Aligned_cols=252  Identities=17%  Similarity=0.180  Sum_probs=194.1

Q ss_pred             ecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEee--CCCCEEEEEeCCCc
Q psy17682        162 GGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP--TAQNVLLTAGSDNN  239 (490)
Q Consensus       162 ~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~~l~s~~~dg~  239 (490)
                      ..|++.|..+...--| .+|+|++.|++|+|+..+++...    .+...+.+|.++|+-++|..  .| .+|++++.||.
T Consensus         8 t~H~D~IHda~lDyyg-krlATcsSD~tVkIf~v~~n~~s----~ll~~L~Gh~GPVwqv~wahPk~G-~iLAScsYDgk   81 (299)
T KOG1332|consen    8 TQHEDMIHDAQLDYYG-KRLATCSSDGTVKIFEVRNNGQS----KLLAELTGHSGPVWKVAWAHPKFG-TILASCSYDGK   81 (299)
T ss_pred             hhhhhhhhHhhhhhhc-ceeeeecCCccEEEEEEcCCCCc----eeeeEecCCCCCeeEEeecccccC-cEeeEeecCce
Confidence            4799999988877767 89999999999999999877652    34456899999999999964  46 59999999999


Q ss_pred             EEEEECCCCe--eEEEEecCCCcEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCC-c--eeeeeeecCCCceeEEEEeCC
Q psy17682        240 VAIWNVGTGE--IMIQIECHPDIVYSASWNWD--GSKLLTTCKDKKMRIINPRTG-A--IEEEAVCHEGSKATRAIYLKS  312 (490)
Q Consensus       240 v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~-~--~~~~~~~~~~~~~~~~~~s~~  312 (490)
                      |.||.-.++.  .......|...|++++|.|.  |-.|++++.||.|.|.+.+.. .  ..+....|.-. ++++.|.|.
T Consensus        82 VIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~G-vnsVswapa  160 (299)
T KOG1332|consen   82 VIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIG-VNSVSWAPA  160 (299)
T ss_pred             EEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccc-cceeeecCc
Confidence            9999988774  33445679999999999995  468999999999999998765 1  22333466655 889999886


Q ss_pred             ---C-----------cEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCC---CeEEEEecCCCeEEE
Q psy17682        313 ---G-----------LIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDT---NLVYLCGKGDSVIRY  375 (490)
Q Consensus       313 ---~-----------~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~g~~dg~i~i  375 (490)
                         |           +.|++|+   .|..|+||+.....-.......+|..-|..++|.|.-   +.-+++++.||++.|
T Consensus       161 ~~~g~~~~~~~~~~~krlvSgG---cDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viI  237 (299)
T KOG1332|consen  161 SAPGSLVDQGPAAKVKRLVSGG---CDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVII  237 (299)
T ss_pred             CCCccccccCcccccceeeccC---CccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEE
Confidence               4           5688887   7999999999886322222234677789999999964   333489999999999


Q ss_pred             EEecCCCCe--eEEeeeeeCCCceeeEEEeeCceeEEeecc--eeEEEEecCCC
Q psy17682        376 FEITAEPPF--VHYINTFQTPDPQRGIGMMPKRGCDVNSCE--IGRFFRLNNSG  425 (490)
Q Consensus       376 wd~~~~~~~--~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~~~~~~  425 (490)
                      |........  ...++.  .+..+..+.||+.|.+|+.+++  .+.+|+-...+
T Consensus       238 wt~~~e~e~wk~tll~~--f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~~G  289 (299)
T KOG1332|consen  238 WTKDEEYEPWKKTLLEE--FPDVVWRVSWSLSGNILAVSGGDNKVTLWKENVDG  289 (299)
T ss_pred             EEecCccCccccccccc--CCcceEEEEEeccccEEEEecCCcEEEEEEeCCCC
Confidence            998753211  123332  3468999999999999888755  66778766554

>KOG1539|consensus

Probab=99.94  E-value=1.7e-23  Score=199.44  Aligned_cols=360  Identities=13%  Similarity=0.127  Sum_probs=272.4

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK  104 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (490)
                      +..||-+ ..+.+.++.+|...|++++-+|-- ++++.|-.+|+|.|++++.++.                  +......
T Consensus       184 lql~Nvr-t~K~v~~f~~~~s~IT~ieqsPaL-DVVaiG~~~G~ViifNlK~dki------------------l~sFk~d  243 (910)
T KOG1539|consen  184 LQLWNVR-TGKVVYTFQEFFSRITAIEQSPAL-DVVAIGLENGTVIIFNLKFDKI------------------LMSFKQD  243 (910)
T ss_pred             EEEEEec-cCcEEEEecccccceeEeccCCcc-eEEEEeccCceEEEEEcccCcE------------------EEEEEcc
Confidence            3444433 567889999999999999999988 8999999999999999998762                  2222221


Q ss_pred             CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE
Q psy17682        105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG  184 (490)
Q Consensus       105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~  184 (490)
                      .     ..|.+++|..|+    ...++++...|.+.+|+++    +...   ...+...|.+.|....|.|. ...++++
T Consensus       244 ~-----g~VtslSFrtDG----~p~las~~~~G~m~~wDLe----~kkl---~~v~~nah~~sv~~~~fl~~-epVl~ta  306 (910)
T KOG1539|consen  244 W-----GRVTSLSFRTDG----NPLLASGRSNGDMAFWDLE----KKKL---INVTRNAHYGSVTGATFLPG-EPVLVTA  306 (910)
T ss_pred             c-----cceeEEEeccCC----CeeEEeccCCceEEEEEcC----CCee---eeeeeccccCCcccceecCC-CceEeec
Confidence            1     258889998876    4578889999999999997    2211   22234589999999999995 4899999


Q ss_pred             eCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC------------------
Q psy17682        185 SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG------------------  246 (490)
Q Consensus       185 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~------------------  246 (490)
                      +.|..+++|-.+++....   .....-.||..+..|+.|.-...+.+.+++.|++.+.+++.                  
T Consensus       307 ~~DnSlk~~vfD~~dg~p---R~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~k  383 (910)
T KOG1539|consen  307 GADNSLKVWVFDSGDGVP---RLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAK  383 (910)
T ss_pred             cCCCceeEEEeeCCCCcc---hheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccc
Confidence            999999999776554322   22223457999999999984444588888888876665431                  


Q ss_pred             -----------------------------------------------CCee-EEEEe-----cCCCcEEEEEEcCCCCEE
Q psy17682        247 -----------------------------------------------TGEI-MIQIE-----CHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       247 -----------------------------------------------~~~~-~~~~~-----~~~~~v~~~~~~~~~~~l  273 (490)
                                                                     +... ...+.     .....+++++.++.|++.
T Consensus       384 k~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~  463 (910)
T KOG1539|consen  384 KVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFV  463 (910)
T ss_pred             cccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceE
Confidence                                                           1110 01111     112558899999999999


Q ss_pred             EEEeCCCeEEEEeCCCCceeeee---eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCc
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEA---VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNG  350 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~  350 (490)
                      +.|+..|.|-+|++.+|-....+   ..|.+. ++.++...-++.+++++   .+|.+.+||..+..   ......-...
T Consensus       464 ~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~-V~gla~D~~n~~~vsa~---~~Gilkfw~f~~k~---l~~~l~l~~~  536 (910)
T KOG1539|consen  464 FIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGE-VTGLAVDGTNRLLVSAG---ADGILKFWDFKKKV---LKKSLRLGSS  536 (910)
T ss_pred             EEeccCCeEEEEEcccCeeecccccCccccCc-eeEEEecCCCceEEEcc---CcceEEEEecCCcc---eeeeeccCCC
Confidence            99999999999999999877777   366665 99999999899999887   79999999998754   2333344556


Q ss_pred             eeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCceeEEee--cceeEEEEecCCCce
Q psy17682        351 VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSGLC  427 (490)
Q Consensus       351 i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~~~  427 (490)
                      +..+..+.....+ +.+..|-.|+++|+.+.+    .+..+. |.+.|++++|||||++++++  ++.+|+|++-++.++
T Consensus       537 ~~~iv~hr~s~l~-a~~~ddf~I~vvD~~t~k----vvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lI  611 (910)
T KOG1539|consen  537 ITGIVYHRVSDLL-AIALDDFSIRVVDVVTRK----VVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLI  611 (910)
T ss_pred             cceeeeeehhhhh-hhhcCceeEEEEEchhhh----hhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCccee
Confidence            7788877777666 778889999999999876    344444 66899999999999999988  569999999999877


Q ss_pred             EEEEEEEeC
Q psy17682        428 QVVSMTVPR  436 (490)
Q Consensus       428 ~~i~~~~p~  436 (490)
                      ..+.+..|.
T Consensus       612 D~~~vd~~~  620 (910)
T KOG1539|consen  612 DGLLVDSPC  620 (910)
T ss_pred             eeEecCCcc
Confidence            776554443

>KOG0646|consensus

Probab=99.93  E-value=3.8e-24  Score=191.39  Aligned_cols=249  Identities=14%  Similarity=0.214  Sum_probs=194.8

Q ss_pred             EEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccccccee
Q psy17682        130 IRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV  209 (490)
Q Consensus       130 ~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  209 (490)
                      +++....-.+.+|.+.    +..+.- +...   -.++|.|++-+|.| .+|+.|+..|.|++|.+.+|..+..+.    
T Consensus        54 lsaq~~rp~l~vw~i~----k~~~~~-q~~v---~Pg~v~al~s~n~G-~~l~ag~i~g~lYlWelssG~LL~v~~----  120 (476)
T KOG0646|consen   54 LSAQLKRPLLHVWEIL----KKDQVV-QYIV---LPGPVHALASSNLG-YFLLAGTISGNLYLWELSSGILLNVLS----  120 (476)
T ss_pred             eeecccCccccccccC----chhhhh-hhcc---cccceeeeecCCCc-eEEEeecccCcEEEEEeccccHHHHHH----
Confidence            3333444577888875    222211 1122   35789999999998 888888899999999999999887643    


Q ss_pred             eecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC---------CCeeEEEEecCCCcEEEEEEcCC--CCEEEEEeC
Q psy17682        210 DLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG---------TGEIMIQIECHPDIVYSASWNWD--GSKLLTTCK  278 (490)
Q Consensus       210 ~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~---------~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~  278 (490)
                         +|-..|+|+.|+-|+. +|++||.||.|.+|.+.         +-++++.+..|.-+|+++...+-  ..+++++|.
T Consensus       121 ---aHYQ~ITcL~fs~dgs-~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~  196 (476)
T KOG0646|consen  121 ---AHYQSITCLKFSDDGS-HIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASE  196 (476)
T ss_pred             ---hhccceeEEEEeCCCc-EEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecC
Confidence               5999999999999996 99999999999999863         34678889999999999998774  368999999


Q ss_pred             CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC--C------------eEEEe
Q psy17682        279 DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE--P------------IVMVE  344 (490)
Q Consensus       279 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~--~------------~~~~~  344 (490)
                      |.++++||+..+..+.++....  .+.+++.+|-++.+.+|+   .+|.|.+.++.....  .            .....
T Consensus       197 D~t~k~wdlS~g~LLlti~fp~--si~av~lDpae~~~yiGt---~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~  271 (476)
T KOG0646|consen  197 DRTIKLWDLSLGVLLLTITFPS--SIKAVALDPAERVVYIGT---EEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVL  271 (476)
T ss_pred             CceEEEEEeccceeeEEEecCC--cceeEEEcccccEEEecC---CcceEEeeehhcCCcccccccccccccccceeeee
Confidence            9999999999999888876444  499999999999999998   678887776654320  0            01112


Q ss_pred             ccCCC--ceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeC
Q psy17682        345 LDTSN--GVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPK  405 (490)
Q Consensus       345 ~~~~~--~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~  405 (490)
                      .+|..  .|++++.+-||..| ++|+.||.|.|||+.+.+    .+.... ..++|+.+.+.|-
T Consensus       272 ~Gh~~~~~ITcLais~DgtlL-lSGd~dg~VcvWdi~S~Q----~iRtl~~~kgpVtnL~i~~~  330 (476)
T KOG0646|consen  272 VGHENESAITCLAISTDGTLL-LSGDEDGKVCVWDIYSKQ----CIRTLQTSKGPVTNLQINPL  330 (476)
T ss_pred             ccccCCcceeEEEEecCccEE-EeeCCCCCEEEEecchHH----HHHHHhhhccccceeEeecc
Confidence            24544  79999999999999 899999999999999877    333333 4468999998664

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.93  E-value=5.7e-23  Score=191.62  Aligned_cols=280  Identities=13%  Similarity=0.107  Sum_probs=193.9

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK  104 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (490)
                      +.+|+..+. +.+..+.+|. .+.++.|+|++..++++++.|+.|++||..+++...                       
T Consensus        13 v~~~d~~t~-~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~-----------------------   67 (300)
T TIGR03866        13 ISVIDTATL-EVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIG-----------------------   67 (300)
T ss_pred             EEEEECCCC-ceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEE-----------------------
Confidence            455665433 3555666554 478899999995555778889999999987643100                       


Q ss_pred             CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE
Q psy17682        105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG  184 (490)
Q Consensus       105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~  184 (490)
                                                                             .+..+. .+..++|+|+++.+++++
T Consensus        68 -------------------------------------------------------~~~~~~-~~~~~~~~~~g~~l~~~~   91 (300)
T TIGR03866        68 -------------------------------------------------------TLPSGP-DPELFALHPNGKILYIAN   91 (300)
T ss_pred             -------------------------------------------------------eccCCC-CccEEEECCCCCEEEEEc
Confidence                                                                   001111 234678999984444556


Q ss_pred             eCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC-cEEEEECCCCeeEEEEecCCCcEEE
Q psy17682        185 SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN-NVAIWNVGTGEIMIQIECHPDIVYS  263 (490)
Q Consensus       185 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-~v~iwd~~~~~~~~~~~~~~~~v~~  263 (490)
                      +.|+.|++||+.+.+.+..+.        +...+.+++|+|++. +++++..++ .+.+||.++++.+..+. .......
T Consensus        92 ~~~~~l~~~d~~~~~~~~~~~--------~~~~~~~~~~~~dg~-~l~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~  161 (300)
T TIGR03866        92 EDDNLVTVIDIETRKVLAEIP--------VGVEPEGMAVSPDGK-IVVNTSETTNMAHFIDTKTYEIVDNVL-VDQRPRF  161 (300)
T ss_pred             CCCCeEEEEECCCCeEEeEee--------CCCCcceEEECCCCC-EEEEEecCCCeEEEEeCCCCeEEEEEE-cCCCccE
Confidence            678999999998876544332        233467899999996 777777664 57788998887766554 3345678


Q ss_pred             EEEcCCCCEEEEE-eCCCeEEEEeCCCCceeeeeeecC------CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC
Q psy17682        264 ASWNWDGSKLLTT-CKDKKMRIINPRTGAIEEEAVCHE------GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL  336 (490)
Q Consensus       264 ~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~  336 (490)
                      ++|+|+++.|+++ ..++.|++||+++++.+..+..+.      ......++|+|+++.++++..  .++.+.+||.++.
T Consensus       162 ~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~--~~~~i~v~d~~~~  239 (300)
T TIGR03866       162 AEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALG--PANRVAVVDAKTY  239 (300)
T ss_pred             EEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcC--CCCeEEEEECCCC
Confidence            9999999988655 468999999999988776654221      112456889999997655432  3567999999875


Q ss_pred             CCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee
Q psy17682        337 DEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP  404 (490)
Q Consensus       337 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp  404 (490)
                      +..   ....+...+.+++|+|+|++|++++..++.|++||+.+++    .+..+..+...++++++|
T Consensus       240 ~~~---~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~----~~~~~~~~~~~~~~~~~~  300 (300)
T TIGR03866       240 EVL---DYLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALK----VIKSIKVGRLPWGVVVRP  300 (300)
T ss_pred             cEE---EEEEeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCc----EEEEEEcccccceeEeCC
Confidence            432   2222345688999999999996555679999999999987    334444455668888875

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG4283|consensus

Probab=99.93  E-value=8e-24  Score=178.57  Aligned_cols=307  Identities=15%  Similarity=0.176  Sum_probs=215.1

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      .-.-....|.+.|+++...+....+++|||.||.|.+||++....-..            +....               
T Consensus        34 ~d~d~~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~------------s~li~---------------   86 (397)
T KOG4283|consen   34 NDKDFVRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEA------------SGLIA---------------   86 (397)
T ss_pred             CCcceeccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhh------------cccee---------------
Confidence            334445679999999999998889999999999999999986431000            00000               


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                                +..+            +.              ....-.+|+-.|.++.|-|-+.-++.+++-|.++++||
T Consensus        87 ----------k~~c------------~v--------------~~~h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWD  130 (397)
T KOG4283|consen   87 ----------KHKC------------IV--------------AKQHENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWD  130 (397)
T ss_pred             ----------heee------------ec--------------cccCCccceeeeeeeEEeeecCceeecccccceEEEee
Confidence                      0000            00              00112489999999999997767899999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCC--CCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCC-
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTA--QNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS-  271 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-  271 (490)
                      ..+.+....+.        ..+.|++-+++|-.  ..++++|..|-.|++.|+.+|...+.+.+|.+.|.++.|+|... 
T Consensus       131 tnTlQ~a~~F~--------me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~  202 (397)
T KOG4283|consen  131 TNTLQEAVDFK--------MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEW  202 (397)
T ss_pred             cccceeeEEee--------cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCcee
Confidence            99888766655        45667777777753  23678888889999999999999999999999999999999665 


Q ss_pred             EEEEEeCCCeEEEEeCCCC-ceeeeee--------------ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC
Q psy17682        272 KLLTTCKDKKMRIINPRTG-AIEEEAV--------------CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL  336 (490)
Q Consensus       272 ~l~~~~~dg~i~iwd~~~~-~~~~~~~--------------~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~  336 (490)
                      .|++|+.||.|++||++.- .+...+.              .|.+ .+..++|+.+|.++++.+   .|..+++|+..++
T Consensus       203 vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~g-kvngla~tSd~~~l~~~g---td~r~r~wn~~~G  278 (397)
T KOG4283|consen  203 VLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYG-KVNGLAWTSDARYLASCG---TDDRIRVWNMESG  278 (397)
T ss_pred             EEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccc-eeeeeeecccchhhhhcc---CccceEEeecccC
Confidence            6788999999999999864 3333333              3334 488999999999999887   7899999999887


Q ss_pred             CCCeEEE-eccCCCc---eeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee
Q psy17682        337 DEPIVMV-ELDTSNG---VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS  412 (490)
Q Consensus       337 ~~~~~~~-~~~~~~~---i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~  412 (490)
                      +...... ...+...   -..+. +.+...+ +---.++.+.++.+-++. +++.+..  +...+.+.++-|+-+-..++
T Consensus       279 ~ntl~~~g~~~~n~~~~~~~~~~-~~~s~vf-v~~p~~~~lall~~~sgs-~ir~l~~--h~k~i~c~~~~~~fq~~~tg  353 (397)
T KOG4283|consen  279 RNTLREFGPIIHNQTTSFAVHIQ-SMDSDVF-VLFPNDGSLALLNLLEGS-FVRRLST--HLKRINCAAYRPDFEQCFTG  353 (397)
T ss_pred             cccccccccccccccccceEEEe-ecccceE-EEEecCCeEEEEEccCce-EEEeeec--ccceeeEEeecCchhhhhcc
Confidence            6433211 1111111   11122 2222222 222345888999988887 3333432  24578888888887766676


Q ss_pred             cceeEEEEe
Q psy17682        413 CEIGRFFRL  421 (490)
Q Consensus       413 ~~~~~~~~~  421 (490)
                      +-+.+++-.
T Consensus       354 ~~d~ni~~w  362 (397)
T KOG4283|consen  354 DMNGNIYMW  362 (397)
T ss_pred             ccCCccccc
Confidence            555444443

>KOG4328|consensus

Probab=99.93  E-value=6e-24  Score=189.57  Aligned_cols=299  Identities=18%  Similarity=0.210  Sum_probs=216.3

Q ss_pred             EEecccccceeeeEEeccCCC-ceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQ-NVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~-~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      .....-|.++|++++|+|..+ +++|+|.+-|.|-+||+...+..                                   
T Consensus       179 ~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d-----------------------------------  223 (498)
T KOG4328|consen  179 LNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKD-----------------------------------  223 (498)
T ss_pred             cceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCc-----------------------------------
Confidence            345667999999999999987 78999999999999999742200                                   


Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI  195 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~  195 (490)
                                                             ...+..+..|.++|.++.|+|.+...+++.+.||+|++-|+
T Consensus       224 ---------------------------------------~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~  264 (498)
T KOG4328|consen  224 ---------------------------------------KDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDF  264 (498)
T ss_pred             ---------------------------------------cCceEEeccCCccccceEecCCChhheeeeccCceeeeeee
Confidence                                                   00112345799999999999998899999999999999999


Q ss_pred             CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee-EEEEecCCCcEEEEEEcCC-CCEE
Q psy17682        196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI-MIQIECHPDIVYSASWNWD-GSKL  273 (490)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~-~~~l  273 (490)
                      +.+.....+.     +........++.|+.+.. .++.+..=|...+||+++++. ...+..|...|.+++++|. ..+|
T Consensus       265 ~~~i~e~v~s-----~~~d~~~fs~~d~~~e~~-~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~l  338 (498)
T KOG4328|consen  265 EGNISEEVLS-----LDTDNIWFSSLDFSAESR-SVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFL  338 (498)
T ss_pred             cchhhHHHhh-----cCccceeeeeccccCCCc-cEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchhe
Confidence            8765433222     212345678888888876 566666667999999997654 5566678889999999994 4689


Q ss_pred             EEEeCCCeEEEEeCCCCceee----eeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCC---CCCCCeEEEecc
Q psy17682        274 LTTCKDKKMRIINPRTGAIEE----EAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPD---HLDEPIVMVELD  346 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~---~~~~~~~~~~~~  346 (490)
                      ++++.|++++|||+|.-....    ....|... |.++.|||.+-.|++.+   .|..|+|||..   ...++.......
T Consensus       339 aT~s~D~T~kIWD~R~l~~K~sp~lst~~Hrrs-V~sAyFSPs~gtl~TT~---~D~~IRv~dss~~sa~~~p~~~I~Hn  414 (498)
T KOG4328|consen  339 ATASLDQTAKIWDLRQLRGKASPFLSTLPHRRS-VNSAYFSPSGGTLLTTC---QDNEIRVFDSSCISAKDEPLGTIPHN  414 (498)
T ss_pred             eecccCcceeeeehhhhcCCCCcceecccccce-eeeeEEcCCCCceEeec---cCCceEEeecccccccCCccceeecc
Confidence            999999999999999653322    22256554 99999999955566655   69999999985   333444333322


Q ss_pred             CCC----ceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC--Cceee-EEEeeCceeEEee-cceeEE
Q psy17682        347 TSN----GVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP--DPQRG-IGMMPKRGCDVNS-CEIGRF  418 (490)
Q Consensus       347 ~~~----~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~i~~-~~~sp~~~~l~~~-~~~~~~  418 (490)
                      +..    ......|.|+..++ ++|..-..|-|+|-..++    .+..+..+  ..|.+ ..|+|-+..+++| ...+.+
T Consensus       415 ~~t~RwlT~fKA~W~P~~~li-~vg~~~r~IDv~~~~~~q----~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki  489 (498)
T KOG4328|consen  415 NRTGRWLTPFKAAWDPDYNLI-VVGRYPRPIDVFDGNGGQ----MVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKI  489 (498)
T ss_pred             CcccccccchhheeCCCccEE-EEeccCcceeEEcCCCCE----EeeeccCccccccccceeecccccceeccCCccceE
Confidence            222    24567899998888 778888889999988876    22222221  23444 4899988855555 557778


Q ss_pred             EEecCC
Q psy17682        419 FRLNNS  424 (490)
Q Consensus       419 ~~~~~~  424 (490)
                      |.+.+.
T Consensus       490 ~vft~k  495 (498)
T KOG4328|consen  490 YVFTNK  495 (498)
T ss_pred             EEEecC
Confidence            866554

>KOG0270|consensus

Probab=99.93  E-value=3.9e-24  Score=190.15  Aligned_cols=210  Identities=21%  Similarity=0.325  Sum_probs=171.8

Q ss_pred             ecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEE
Q psy17682        162 GGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVA  241 (490)
Q Consensus       162 ~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~  241 (490)
                      .+|++.|..+.|+..-.+.||+||.|.+|++||+.++++...+.       .|...|.++.|+|....+|++|+.|++|.
T Consensus       240 ~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~-------~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~  312 (463)
T KOG0270|consen  240 SGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSIT-------HHGKKVQTLEWHPYEPSVLLSGSYDGTVA  312 (463)
T ss_pred             ccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehh-------hcCCceeEEEecCCCceEEEeccccceEE
Confidence            58999999999998888999999999999999999998876654       48999999999999888999999999999


Q ss_pred             EEECCCCeeE-EEEecCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCC-ceeeeeeecCCCceeEEEEeCC-CcEEE
Q psy17682        242 IWNVGTGEIM-IQIECHPDIVYSASWNWDG-SKLLTTCKDKKMRIINPRTG-AIEEEAVCHEGSKATRAIYLKS-GLIFT  317 (490)
Q Consensus       242 iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~s~~-~~~l~  317 (490)
                      +.|.+..... ..++ ..+.|-.++|.|.. ..+++++.||+++-+|+|.. +++.++..|.+. |.++.+++. ..+++
T Consensus       313 l~D~R~~~~s~~~wk-~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~-ISgl~~n~~~p~~l~  390 (463)
T KOG0270|consen  313 LKDCRDPSNSGKEWK-FDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDE-ISGLSVNIQTPGLLS  390 (463)
T ss_pred             eeeccCccccCceEE-eccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCC-cceEEecCCCCccee
Confidence            9999953222 2233 46789999999955 57777889999999999986 899999999986 999999887 45677


Q ss_pred             EEeCCCceeEEEEecCCCCCCCeEEEecc-CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682        318 TGFSKMSERQYSLRAPDHLDEPIVMVELD-TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF  384 (490)
Q Consensus       318 ~~~~~~~~~~i~iwd~~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~  384 (490)
                      +++   .++.+++|++..... ....... .-+...+.++.|+-.++++.|+..+.++|||+.+..++
T Consensus       391 t~s---~d~~Vklw~~~~~~~-~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V  454 (463)
T KOG0270|consen  391 TAS---TDKVVKLWKFDVDSP-KSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPV  454 (463)
T ss_pred             ecc---ccceEEEEeecCCCC-cccccccccccceeecccCCCcceEEEecCccceEEEeecccChhH
Confidence            776   799999999986433 2222111 11236677889998888899999999999999988654

>KOG0302|consensus

Probab=99.93  E-value=8.4e-24  Score=184.22  Aligned_cols=272  Identities=16%  Similarity=0.216  Sum_probs=201.8

Q ss_pred             CCcEEecccccceeeeEEeccCC-CceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTA-QNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST  112 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~-~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (490)
                      +..-....+|.+.|+.+.-.+.+ ..+.++-+..|.|.||++..-..                 .+...+          
T Consensus       141 P~~~~~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~-----------------~l~~~~----------  193 (440)
T KOG0302|consen  141 PQIEMKSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLN-----------------ALSEPG----------  193 (440)
T ss_pred             ccccccccccccccceeeecccCCcceeeeecccCcEEEEEchhhhh-----------------hhcCcc----------
Confidence            33444577899999999988875 35677779999999999876321                 000000          


Q ss_pred             CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEE
Q psy17682        113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKV  192 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~i  192 (490)
                                               ..          ......+++.++.+|.+.=++++|||-..-.|+||..-+.|++
T Consensus       194 -------------------------~~----------~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~l  238 (440)
T KOG0302|consen  194 -------------------------LE----------VKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHL  238 (440)
T ss_pred             -------------------------cc----------ccccccCceEEecccCccceeeecccccccccccCccccceEe
Confidence                                     00          0001233566778999999999999965456999988899999


Q ss_pred             EECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe--eEEEEecCCCcEEEEEEcCCC
Q psy17682        193 WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE--IMIQIECHPDIVYSASWNWDG  270 (490)
Q Consensus       193 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~  270 (490)
                      |...++.-... ..   .+.+|...|..++|+|..+.+|++|+.||+|+|||++.+.  .....+.|.+.|+-+.|+..-
T Consensus       239 w~~~~g~W~vd-~~---Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~  314 (440)
T KOG0302|consen  239 WEPSTGSWKVD-QR---PFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRRE  314 (440)
T ss_pred             eeeccCceeec-Cc---cccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCc
Confidence            99888653222 12   2667999999999999988899999999999999999883  222337899999999999988


Q ss_pred             CEEEEEeCCCeEEEEeCCC---CceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCC--------
Q psy17682        271 SKLLTTCKDKKMRIINPRT---GAIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDE--------  338 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~--------  338 (490)
                      .+|++|+.||+++|||+|+   ++++.+++.|... |+++.|+|. ...|++++   .|..|.|||+.-...        
T Consensus       315 ~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~p-ItsieW~p~e~s~iaasg---~D~QitiWDlsvE~D~ee~~~~a  390 (440)
T KOG0302|consen  315 PLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAP-ITSIEWHPHEDSVIAASG---EDNQITIWDLSVEADEEEIDQEA  390 (440)
T ss_pred             ceeeecCCCceEEEEEhhhccCCCcceeEEeccCC-eeEEEeccccCceEEecc---CCCcEEEEEeeccCChhhhcccc
Confidence            8999999999999999986   4678889888875 999999997 34555554   699999999864221        


Q ss_pred             --------CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEE
Q psy17682        339 --------PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYF  376 (490)
Q Consensus       339 --------~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iw  376 (490)
                              +..+........+-.+.|++.-.-++++.+.|| +.||
T Consensus       391 ~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG-fnVf  435 (440)
T KOG0302|consen  391 AEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG-FNVF  435 (440)
T ss_pred             ccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccc-eeEE
Confidence                    112222223455788899998777768888888 3444

>KOG2048|consensus

Probab=99.93  E-value=1.4e-22  Score=189.18  Aligned_cols=353  Identities=13%  Similarity=0.159  Sum_probs=244.5

Q ss_pred             eeeeccCCCCCcEEeccccc-ceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQ-RRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGG  103 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~-~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (490)
                      +.+||+...--....+.||. +.|.+++|.+.  ..|+|.|.+|+|.-||+.+++..                  .....
T Consensus        49 IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~--~RLFS~g~sg~i~EwDl~~lk~~------------------~~~d~  108 (691)
T KOG2048|consen   49 IEIWNLSNNWFLEPVIHGPEDRSIESLAWAEG--GRLFSSGLSGSITEWDLHTLKQK------------------YNIDS  108 (691)
T ss_pred             EEEEccCCCceeeEEEecCCCCceeeEEEccC--CeEEeecCCceEEEEecccCcee------------------EEecC
Confidence            67788877666666677765 67999999954  46899999999999999987621                  11122


Q ss_pred             CCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEE
Q psy17682        104 KGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIAS  183 (490)
Q Consensus       104 ~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s  183 (490)
                           ....+.+++.+|..     ..++.++.+|.+..+...     .+.+ ...+.+...++.|.+++|+|++ ..+++
T Consensus       109 -----~gg~IWsiai~p~~-----~~l~IgcddGvl~~~s~~-----p~~I-~~~r~l~rq~sRvLslsw~~~~-~~i~~  171 (691)
T KOG2048|consen  109 -----NGGAIWSIAINPEN-----TILAIGCDDGVLYDFSIG-----PDKI-TYKRSLMRQKSRVLSLSWNPTG-TKIAG  171 (691)
T ss_pred             -----CCcceeEEEeCCcc-----ceEEeecCCceEEEEecC-----CceE-EEEeecccccceEEEEEecCCc-cEEEe
Confidence                 12268999999884     567778888866666553     2221 1233455567999999999998 88999


Q ss_pred             EeCCCcEEEEECCCCCcccccccceeeecc-cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEE
Q psy17682        184 GSEDCVVKVWQIPDGGISRTLTEPVVDLLY-HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVY  262 (490)
Q Consensus       184 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~  262 (490)
                      |+.||.|++||...+..+.........+.. ...-|+++.|-.++  .+++|...|+|.+||...+..++.+..|...|.
T Consensus       172 Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~--tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl  249 (691)
T KOG2048|consen  172 GSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS--TIASGDSAGTVTFWDSIFGTLIQSHSCHDADVL  249 (691)
T ss_pred             cccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC--cEEEecCCceEEEEcccCcchhhhhhhhhccee
Confidence            999999999999998876633222222222 33457888888775  699999999999999999999999999999999


Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEeCCCCcee----eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC
Q psy17682        263 SASWNWDGSKLLTTCKDKKMRIINPRTGAIE----EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE  338 (490)
Q Consensus       263 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~  338 (490)
                      +++..+++..+++++.|+.|..|...+.+..    .....|... +.+++..++  .+.+|+   .|..+.+-..+....
T Consensus       250 ~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hd-vrs~av~~~--~l~sgG---~d~~l~i~~s~~~~~  323 (691)
T KOG2048|consen  250 ALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHD-VRSMAVIEN--ALISGG---RDFTLAICSSREFKN  323 (691)
T ss_pred             EEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCccc-ceeeeeecc--eEEecc---eeeEEEEccccccCc
Confidence            9999999999999999999999988766431    112244443 888888877  666776   788888766554221


Q ss_pred             CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC-----eeEEee-eeeCCCceeeEEEeeCceeEEee
Q psy17682        339 PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP-----FVHYIN-TFQTPDPQRGIGMMPKRGCDVNS  412 (490)
Q Consensus       339 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~-----~~~~~~-~~~~~~~i~~~~~sp~~~~l~~~  412 (490)
                      ...... .....-..+...|..+.+ +. -.+..+.+|.+.+.-+     ....+. ..+....|.+.+.||+|.+++.+
T Consensus       324 ~~h~~~-~~~p~~~~v~~a~~~~L~-~~-w~~h~v~lwrlGS~~~~g~~~~~~Llkl~~k~~~nIs~~aiSPdg~~Ia~s  400 (691)
T KOG2048|consen  324 MDHRQK-NLFPASDRVSVAPENRLL-VL-WKAHGVDLWRLGSVILQGEYNYIHLLKLFTKEKENISCAAISPDGNLIAIS  400 (691)
T ss_pred             hhhhcc-ccccccceeecCccceEE-EE-eccccccceeccCcccccccChhhheeeecCCccceeeeccCCCCCEEEEe
Confidence            111110 000001112233443333 32 3456677887766511     111111 12344679999999999998877


Q ss_pred             -cceeEEEEecCCC
Q psy17682        413 -CEIGRFFRLNNSG  425 (490)
Q Consensus       413 -~~~~~~~~~~~~~  425 (490)
                       ....++|++....
T Consensus       401 t~~~~~iy~L~~~~  414 (691)
T KOG2048|consen  401 TVSRTKIYRLQPDP  414 (691)
T ss_pred             eccceEEEEeccCc
Confidence             6788999988744

>KOG0647|consensus

Probab=99.92  E-value=2.8e-23  Score=175.96  Aligned_cols=249  Identities=17%  Similarity=0.217  Sum_probs=186.1

Q ss_pred             eecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC-CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCc
Q psy17682        161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG-GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNN  239 (490)
Q Consensus       161 ~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~  239 (490)
                      -..-++.|.+++|+|....+++.++.||+||+|+++.. ..+.      .....|.++|.+++|+.+|. .+++|+.|+.
T Consensus        23 ~~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~------ka~~~~~~PvL~v~Wsddgs-kVf~g~~Dk~   95 (347)
T KOG0647|consen   23 PNPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVP------KAQQSHDGPVLDVCWSDDGS-KVFSGGCDKQ   95 (347)
T ss_pred             CCCcccchheeEeccccCceEEecccCCceEEEEEecCCcccc------hhhhccCCCeEEEEEccCCc-eEEeeccCCc
Confidence            34567899999999966688889999999999999874 3322      12445999999999999995 8999999999


Q ss_pred             EEEEECCCCeeEEEEecCCCcEEEEEEcCCCC--EEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEE
Q psy17682        240 VAIWNVGTGEIMIQIECHPDIVYSASWNWDGS--KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFT  317 (490)
Q Consensus       240 v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~  317 (490)
                      +++||+.+++. ..+..|..+|..+.|-+...  .|++||.|.+|+.||.|...++.++.....  ++++..  ...+++
T Consensus        96 ~k~wDL~S~Q~-~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeR--vYa~Dv--~~pm~v  170 (347)
T KOG0647|consen   96 AKLWDLASGQV-SQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPER--VYAADV--LYPMAV  170 (347)
T ss_pred             eEEEEccCCCe-eeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccce--eeehhc--cCceeE
Confidence            99999999954 55677999999999988654  899999999999999999999888875442  554433  244666


Q ss_pred             EEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeE-EeeeeeC---
Q psy17682        318 TGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVH-YINTFQT---  393 (490)
Q Consensus       318 ~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~-~~~~~~~---  393 (490)
                      ++.   .++.|.+|++++...........-.-.+.+++..+|.... +.|+.+|.+-|..+..+.+... .+..+..   
T Consensus       171 Vat---a~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~-alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~  246 (347)
T KOG0647|consen  171 VAT---AERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGF-ALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNS  246 (347)
T ss_pred             EEe---cCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCce-EeeeecceEEEEecCCCCccCceeEEEeccCCC
Confidence            666   5889999999876543333322333347788888887776 7899999999999988633111 1111111   


Q ss_pred             ----CCceeeEEEeeCceeEEeec--ceeEEEEecCCC
Q psy17682        394 ----PDPQRGIGMMPKRGCDVNSC--EIGRFFRLNNSG  425 (490)
Q Consensus       394 ----~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~~~~  425 (490)
                          --.|++++|+|....+++.+  +...+|+-+...
T Consensus       247 ~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~  284 (347)
T KOG0647|consen  247 VNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDART  284 (347)
T ss_pred             CCCceEEecceEeecccceEEEecCCceEEEecchhhh
Confidence                12578899999887777664  466778765543

>KOG0301|consensus

Probab=99.92  E-value=3.3e-23  Score=193.84  Aligned_cols=271  Identities=14%  Similarity=0.219  Sum_probs=216.5

Q ss_pred             cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeE-EEECCCCCCEEEEEeCCCcE
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLD-IAWSPHDDNVIASGSEDCVV  190 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~-~~~~p~~~~~l~s~~~dg~i  190 (490)
                      .+..+++.+.      ..+.+++.+|++++|.-.      ++.......+.+|.+-|.+ +++.+..+-++++|+.|++|
T Consensus        16 DVr~v~~~~~------~~i~s~sRd~t~~vw~~~------~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i   83 (745)
T KOG0301|consen   16 DVRAVAVTDG------VCIISGSRDGTVKVWAKK------GKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTI   83 (745)
T ss_pred             chheeEecCC------eEEeecCCCCceeeeecc------CcccccceecccCcceeeccceeccccCcceEeecccceE
Confidence            4555555544      268888999999999853      3334455667889999888 88886443579999999999


Q ss_pred             EEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC
Q psy17682        191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG  270 (490)
Q Consensus       191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~  270 (490)
                      .+|...+.....       .+.+|+..|.++....++  .+++|+.|.++++|..  +++...+++|...|++++.-|++
T Consensus        84 ~v~~~~~~~P~~-------~LkgH~snVC~ls~~~~~--~~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l~e~  152 (745)
T KOG0301|consen   84 IVFKLSQAEPLY-------TLKGHKSNVCSLSIGEDG--TLISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASLPEN  152 (745)
T ss_pred             EEEecCCCCchh-------hhhccccceeeeecCCcC--ceEecccccceEEecc--hhhhcccCCcchheeeeeecCCC
Confidence            999987775444       467799999999988776  3999999999999975  56677799999999999999987


Q ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCc
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNG  350 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~  350 (490)
                       .+++|+.|.+|++|.-  ++.++++.+|... ++.+++-+++.++.++    .||.|++|++.. ++  .....+|.+-
T Consensus       153 -~~vTgsaDKtIklWk~--~~~l~tf~gHtD~-VRgL~vl~~~~flScs----NDg~Ir~w~~~g-e~--l~~~~ghtn~  221 (745)
T KOG0301|consen  153 -TYVTGSADKTIKLWKG--GTLLKTFSGHTDC-VRGLAVLDDSHFLSCS----NDGSIRLWDLDG-EV--LLEMHGHTNF  221 (745)
T ss_pred             -cEEeccCcceeeeccC--Cchhhhhccchhh-eeeeEEecCCCeEeec----CCceEEEEeccC-ce--eeeeeccceE
Confidence             8999999999999965  7889999999986 9999999998877666    699999999954 43  3344577788


Q ss_pred             eeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC-CceeeEEEeeCceeEEee-cceeEEEEecC
Q psy17682        351 VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP-DPQRGIGMMPKRGCDVNS-CEIGRFFRLNN  423 (490)
Q Consensus       351 i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~-~~~~~~~~~~~  423 (490)
                      +.++...+++..+ ++++.|++++||+...      ......++ ..|+++.+-++|..++.+ ++.+|+|-...
T Consensus       222 vYsis~~~~~~~I-vs~gEDrtlriW~~~e------~~q~I~lPttsiWsa~~L~NgDIvvg~SDG~VrVfT~~k  289 (745)
T KOG0301|consen  222 VYSISMALSDGLI-VSTGEDRTLRIWKKDE------CVQVITLPTTSIWSAKVLLNGDIVVGGSDGRVRVFTVDK  289 (745)
T ss_pred             EEEEEecCCCCeE-EEecCCceEEEeecCc------eEEEEecCccceEEEEEeeCCCEEEeccCceEEEEEecc
Confidence            9999977777777 7889999999999883      33334444 379999999998875554 55778887764

>KOG2445|consensus

Probab=99.92  E-value=5.4e-23  Score=174.69  Aligned_cols=282  Identities=12%  Similarity=0.106  Sum_probs=197.3

Q ss_pred             cccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEec
Q psy17682         40 LLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITIS  119 (490)
Q Consensus        40 l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  119 (490)
                      -.+|.+-|+++.|.+.| +.+|||+.|++|+|||.+...-                                        
T Consensus         9 ~s~h~DlihdVs~D~~G-RRmAtCSsDq~vkI~d~~~~s~----------------------------------------   47 (361)
T KOG2445|consen    9 DSGHKDLIHDVSFDFYG-RRMATCSSDQTVKIWDSTSDSG----------------------------------------   47 (361)
T ss_pred             ccCCcceeeeeeecccC-ceeeeccCCCcEEEEeccCCCC----------------------------------------
Confidence            36899999999999999 9999999999999999754320                                        


Q ss_pred             cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEEC-CCCCCEEEEEeCCCcEEEEECCCC
Q psy17682        120 EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWS-PHDDNVIASGSEDCVVKVWQIPDG  198 (490)
Q Consensus       120 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~-p~~~~~l~s~~~dg~i~iwd~~~~  198 (490)
                                                        ........+.|.+.|..+.|. |.=+..+|+++.|+++.||.-...
T Consensus        48 ----------------------------------~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~   93 (361)
T KOG2445|consen   48 ----------------------------------TWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEK   93 (361)
T ss_pred             ----------------------------------ceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeeccc
Confidence                                              011122456899999999995 443489999999999999985311


Q ss_pred             Cccc--ccccceeeecccccCEEEEEEeeC--CCCEEEEEeCCCcEEEEECCCC------eeEEEEe-------cCCCcE
Q psy17682        199 GISR--TLTEPVVDLLYHQRRVGLVLWHPT--AQNVLLTAGSDNNVAIWNVGTG------EIMIQIE-------CHPDIV  261 (490)
Q Consensus       199 ~~~~--~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~dg~v~iwd~~~~------~~~~~~~-------~~~~~v  261 (490)
                      ....  .--.....+....+.|++++|.|.  | ..|++++.||.+|||+.-..      ....+++       .+..+.
T Consensus        94 ~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlG-LklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~  172 (361)
T KOG2445|consen   94 SEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLG-LKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPC  172 (361)
T ss_pred             ccccccceeEEEEEeecCCcceeEEEecchhcc-eEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcc
Confidence            1100  000123345567889999999997  4 47899999999999986543      2222333       356678


Q ss_pred             EEEEEcCC---CCEEEEEeCC-----CeEEEEeCCCC----ceeeeeeecCCCceeEEEEeCC----CcEEEEEeCCCce
Q psy17682        262 YSASWNWD---GSKLLTTCKD-----KKMRIINPRTG----AIEEEAVCHEGSKATRAIYLKS----GLIFTTGFSKMSE  325 (490)
Q Consensus       262 ~~~~~~~~---~~~l~~~~~d-----g~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~s~~----~~~l~~~~~~~~~  325 (490)
                      .|+.|+|.   ..+|+.|+.+     +.++||.....    ..+.++..|... |+.++|.|+    ..+||+++   .|
T Consensus       173 ~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dp-I~di~wAPn~Gr~y~~lAvA~---kD  248 (361)
T KOG2445|consen  173 FCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDP-IRDISWAPNIGRSYHLLAVAT---KD  248 (361)
T ss_pred             eEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCc-ceeeeeccccCCceeeEEEee---cC
Confidence            89999983   3578888765     47888876543    244556677664 999999998    35788888   67


Q ss_pred             eEEEEecCCCCCC-----------------CeEEE-eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEE
Q psy17682        326 RQYSLRAPDHLDE-----------------PIVMV-ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHY  387 (490)
Q Consensus       326 ~~i~iwd~~~~~~-----------------~~~~~-~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~  387 (490)
                      | |+||.++....                 ...+. .-+|.+.|+.+.|+-.|..| ++.+.||.||+|...-... ...
T Consensus       249 g-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiL-sStGdDG~VRLWkany~n~-~kC  325 (361)
T KOG2445|consen  249 G-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTIL-SSTGDDGCVRLWKANYNNL-WKC  325 (361)
T ss_pred             c-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEE-eecCCCceeeehhhhhhhh-hee
Confidence            7 99999874210                 11112 22466789999999999998 7888999999998764331 123


Q ss_pred             eeeeeCCCceeeEEEee
Q psy17682        388 INTFQTPDPQRGIGMMP  404 (490)
Q Consensus       388 ~~~~~~~~~i~~~~~sp  404 (490)
                      ...+.....+....|++
T Consensus       326 ~sv~~~e~~~~~~~~~~  342 (361)
T KOG2445|consen  326 TSVLKAEGSVTKPDFSQ  342 (361)
T ss_pred             eeEEeccCCCCCccccc
Confidence            33344444444444443

>KOG0269|consensus

Probab=99.92  E-value=1.3e-23  Score=198.70  Aligned_cols=235  Identities=15%  Similarity=0.245  Sum_probs=189.7

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCC---CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEE
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPD---GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIW  243 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iw  243 (490)
                      .+..+.|+....++|||++..|.|.+||+..   .+.+..       +..|...+.++.|++..+++|++|+.||+|++|
T Consensus        89 S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~-------f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~  161 (839)
T KOG0269|consen   89 SAADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTV-------FNEHERSANKLDFHSTEPNILISGSQDGTVKCW  161 (839)
T ss_pred             ehhhcccccchhhhheeecCCCcEEEEecCccccchhhhH-------hhhhccceeeeeeccCCccEEEecCCCceEEEE
Confidence            3456778766668999999999999999976   333333       445999999999999999999999999999999


Q ss_pred             ECCCCeeEEEEecCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCC-ceeeeeeecCCCceeEEEEeCCCcEEEEEeC
Q psy17682        244 NVGTGEIMIQIECHPDIVYSASWNW-DGSKLLTTCKDKKMRIINPRTG-AIEEEAVCHEGSKATRAIYLKSGLIFTTGFS  321 (490)
Q Consensus       244 d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~  321 (490)
                      |++..+...++.+....|..+.|+| .+..|+++...|.+.+||+|.. ++...+..|.+. +.++.|+|++.+||+|+ 
T Consensus       162 DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~Gp-V~c~nwhPnr~~lATGG-  239 (839)
T KOG0269|consen  162 DLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGP-VLCLNWHPNREWLATGG-  239 (839)
T ss_pred             eeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCc-eEEEeecCCCceeeecC-
Confidence            9999998888888889999999999 6789999999999999999976 456667788885 99999999999999998 


Q ss_pred             CCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEec--CCCeEEEEEecCCCCeeEEeeeeeCCCceee
Q psy17682        322 KMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK--GDSVIRYFEITAEPPFVHYINTFQTPDPQRG  399 (490)
Q Consensus       322 ~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~  399 (490)
                        +|+.|+|||..... ......+....++..+.|-|..++.+++++  .|-.|+|||++..  ++.......|...++.
T Consensus       240 --RDK~vkiWd~t~~~-~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRP--YIP~~t~~eH~~~vt~  314 (839)
T KOG0269|consen  240 --RDKMVKIWDMTDSR-AKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRP--YIPYATFLEHTDSVTG  314 (839)
T ss_pred             --CCccEEEEeccCCC-ccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccc--cccceeeeccCccccc
Confidence              89999999998643 333444556678999999999988877764  5779999999875  3333333346667889


Q ss_pred             EEEee-CceeEEeecce
Q psy17682        400 IGMMP-KRGCDVNSCEI  415 (490)
Q Consensus       400 ~~~sp-~~~~l~~~~~~  415 (490)
                      ++|-. |..++.+.+.+
T Consensus       315 i~W~~~d~~~l~s~sKD  331 (839)
T KOG0269|consen  315 IAWDSGDRINLWSCSKD  331 (839)
T ss_pred             eeccCCCceeeEeecCc
Confidence            99976 33444444433

>KOG4283|consensus

Probab=99.92  E-value=1e-22  Score=171.95  Aligned_cols=219  Identities=15%  Similarity=0.213  Sum_probs=176.8

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccc--cc----cc--ceeeecccccCEEEEEEeeCCCCEE
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISR--TL----TE--PVVDLLYHQRRVGLVLWHPTAQNVL  231 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~----~~--~~~~~~~~~~~v~~~~~~p~~~~~l  231 (490)
                      ..+.|.+.|+++...+..++++++|+.||.|.+||+++.....  .+    ..  ....-.+|.-.|.++.|-|-..-++
T Consensus        38 ~~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmF  117 (397)
T KOG4283|consen   38 FVRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMF  117 (397)
T ss_pred             eeccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCcee
Confidence            4567999999999999877999999999999999997543111  00    00  1112345888999999999866689


Q ss_pred             EEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCC---CCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEE
Q psy17682        232 LTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWD---GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAI  308 (490)
Q Consensus       232 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  308 (490)
                      .+++.|.++++||..+-+....|+ ..+.|++-+++|-   .-++++|..|-.|++.|+.+|....++.+|.+. +..+.
T Consensus       118 tssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~-vlaV~  195 (397)
T KOG4283|consen  118 TSSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDG-VLAVE  195 (397)
T ss_pred             ecccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCc-eEEEE
Confidence            999999999999999999888888 5778999999993   347888888999999999999999999999987 99999


Q ss_pred             EeCCCc-EEEEEeCCCceeEEEEecCCCCC-C-----------CeEEE-eccCCCceeeeeecCCCCeEEEEecCCCeEE
Q psy17682        309 YLKSGL-IFTTGFSKMSERQYSLRAPDHLD-E-----------PIVMV-ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIR  374 (490)
Q Consensus       309 ~s~~~~-~l~~~~~~~~~~~i~iwd~~~~~-~-----------~~~~~-~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~  374 (490)
                      |+|... .|++|+   .|+.+++||++... +           +...+ ...|.+.+..++|+.++.++ ++.+.|..++
T Consensus       196 Wsp~~e~vLatgs---aDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l-~~~gtd~r~r  271 (397)
T KOG4283|consen  196 WSPSSEWVLATGS---ADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYL-ASCGTDDRIR  271 (397)
T ss_pred             eccCceeEEEecC---CCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhh-hhccCccceE
Confidence            999966 556777   79999999998652 1           11111 23456679999999999999 6777899999


Q ss_pred             EEEecCCCCe
Q psy17682        375 YFEITAEPPF  384 (490)
Q Consensus       375 iwd~~~~~~~  384 (490)
                      +|+...|+..
T Consensus       272 ~wn~~~G~nt  281 (397)
T KOG4283|consen  272 VWNMESGRNT  281 (397)
T ss_pred             EeecccCccc
Confidence            9999988643

>KOG1036|consensus

Probab=99.91  E-value=5.8e-22  Score=168.70  Aligned_cols=266  Identities=14%  Similarity=0.133  Sum_probs=200.3

Q ss_pred             cceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccc
Q psy17682         44 QRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYV  123 (490)
Q Consensus        44 ~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  123 (490)
                      .+.|..+.|+|.. ..|+.++-||+++++|........                  .      ......+.+.+|.++  
T Consensus        13 ~d~IS~v~f~~~~-~~LLvssWDgslrlYdv~~~~l~~------------------~------~~~~~plL~c~F~d~--   65 (323)
T KOG1036|consen   13 EDGISSVKFSPSS-SDLLVSSWDGSLRLYDVPANSLKL------------------K------FKHGAPLLDCAFADE--   65 (323)
T ss_pred             hhceeeEEEcCcC-CcEEEEeccCcEEEEeccchhhhh------------------h------eecCCceeeeeccCC--
Confidence            5789999999988 555556699999999988753211                  0      111225667777665  


Q ss_pred             cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc
Q psy17682        124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT  203 (490)
Q Consensus       124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~  203 (490)
                          ..+++++-+|.|+.+++.     .+    ....+..|..+|.||.+++.. ..+++|+.|++|++||.+.......
T Consensus        66 ----~~~~~G~~dg~vr~~Dln-----~~----~~~~igth~~~i~ci~~~~~~-~~vIsgsWD~~ik~wD~R~~~~~~~  131 (323)
T KOG1036|consen   66 ----STIVTGGLDGQVRRYDLN-----TG----NEDQIGTHDEGIRCIEYSYEV-GCVISGSWDKTIKFWDPRNKVVVGT  131 (323)
T ss_pred             ----ceEEEeccCceEEEEEec-----CC----cceeeccCCCceEEEEeeccC-CeEEEcccCccEEEEeccccccccc
Confidence                368889999999999996     22    223466899999999999855 7999999999999999986544443


Q ss_pred             cccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeCCCe
Q psy17682        204 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE--CHPDIVYSASWNWDGSKLLTTCKDKK  281 (490)
Q Consensus       204 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~  281 (490)
                      +.        ....|.++...  + +.|+.|+.|..+.+||+++.....+..  ..+-.+.++++.|++.-+++++-||.
T Consensus       132 ~d--------~~kkVy~~~v~--g-~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGR  200 (323)
T KOG1036|consen  132 FD--------QGKKVYCMDVS--G-NRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGR  200 (323)
T ss_pred             cc--------cCceEEEEecc--C-CEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecce
Confidence            33        34478888765  3 479999999999999999865433222  34566899999998888999999999


Q ss_pred             EEEEeCCCC----ceeeeeeecCC--------CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCC
Q psy17682        282 MRIINPRTG----AIEEEAVCHEG--------SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSN  349 (490)
Q Consensus       282 i~iwd~~~~----~~~~~~~~~~~--------~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~  349 (490)
                      |.+=.+...    +....++.|..        .++..++|+|-...|++|+   .||.|.+||+.+.+....+..  -..
T Consensus       201 VavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgG---sDG~V~~Wd~~~rKrl~q~~~--~~~  275 (323)
T KOG1036|consen  201 VAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGG---SDGIVNIWDLFNRKRLKQLAK--YET  275 (323)
T ss_pred             EEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecC---CCceEEEccCcchhhhhhccC--CCC
Confidence            888766655    34445555543        2588999999999999998   799999999998765444332  235


Q ss_pred             ceeeeeecCCCCeEEEEe
Q psy17682        350 GVMFPLYDPDTNLVYLCG  367 (490)
Q Consensus       350 ~i~~~~~s~~~~~l~~~g  367 (490)
                      .|.+++|+.+|..| |.+
T Consensus       276 SI~slsfs~dG~~L-Aia  292 (323)
T KOG1036|consen  276 SISSLSFSMDGSLL-AIA  292 (323)
T ss_pred             ceEEEEeccCCCeE-EEE
Confidence            69999999999999 444

>KOG0307|consensus

Probab=99.91  E-value=5.8e-24  Score=209.84  Aligned_cols=304  Identities=14%  Similarity=0.207  Sum_probs=227.3

Q ss_pred             eeeEEeccCCCceEEee----------eCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         47 VGLVLWHPTAQNVLLTA----------GKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        47 V~~v~~~p~~~~~l~s~----------~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      -..++|+|.+..++++|          +.+.++.||.+....-                  ...+...+........+.+
T Consensus         9 ta~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~------------------~~dlk~~~s~~s~~rF~kL   70 (1049)
T KOG0307|consen    9 TATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDE------------------SSDLKPVGSLQSSNRFNKL   70 (1049)
T ss_pred             cceEEecCCCchhhHHHhhhhccccccccccccceeeecccCc------------------cccccccccccccccceee
Confidence            34678999996577766          3345555665442210                  0011222333344567888


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP  196 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~  196 (490)
                      +|.+-+.+.. .+|+.+..+|.|.+|+....  ..+.....+.....|++.|.++.|++..+++||+|+.||.|.|||+.
T Consensus        71 ~W~~~g~~~~-GlIaGG~edG~I~ly~p~~~--~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDln  147 (1049)
T KOG0307|consen   71 AWGSYGSHSH-GLIAGGLEDGNIVLYDPASI--IANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLN  147 (1049)
T ss_pred             eecccCCCcc-ceeeccccCCceEEecchhh--ccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccC
Confidence            8987764333 78999999999999998732  12333445667789999999999999988899999999999999998


Q ss_pred             CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCC--cEEEEEEcCCC-CEE
Q psy17682        197 DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPD--IVYSASWNWDG-SKL  273 (490)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~--~v~~~~~~~~~-~~l  273 (490)
                      +-+......     -....+.|.+++|+..-.++|++++.+|.+.|||++..+++..+..+..  .+..++|+|+. ..+
T Consensus       148 n~~tP~~~~-----~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql  222 (1049)
T KOG0307|consen  148 KPETPFTPG-----SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQL  222 (1049)
T ss_pred             CcCCCCCCC-----CCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceee
Confidence            754433321     1124578999999998888999999999999999999988877765443  47899999977 466


Q ss_pred             EEEeCCC---eEEEEeCCCC-ceeeeeeecCCCceeEEEEeCCC-cEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC
Q psy17682        274 LTTCKDK---KMRIINPRTG-AIEEEAVCHEGSKATRAIYLKSG-LIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS  348 (490)
Q Consensus       274 ~~~~~dg---~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~s~~~-~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~  348 (490)
                      ++++.|.   .|.+||+|.- .+++++.+|... +.++.|.+.+ ++|++++   .|+.+.+|+..+++....+.  ...
T Consensus       223 ~~As~dd~~PviqlWDlR~assP~k~~~~H~~G-ilslsWc~~D~~lllSsg---kD~~ii~wN~~tgEvl~~~p--~~~  296 (1049)
T KOG0307|consen  223 LVASGDDSAPVIQLWDLRFASSPLKILEGHQRG-ILSLSWCPQDPRLLLSSG---KDNRIICWNPNTGEVLGELP--AQG  296 (1049)
T ss_pred             eeecCCCCCceeEeecccccCCchhhhcccccc-eeeeccCCCCchhhhccc---CCCCeeEecCCCceEeeecC--CCC
Confidence            6666554   4999999864 567777888887 9999999886 6777776   79999999999976322222  234


Q ss_pred             CceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      ..+..+.|+|...-++++.+-||.|.||.+....
T Consensus       297 nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  297 NWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             cceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence            6699999999999777899999999999998764

>KOG1063|consensus

Probab=99.91  E-value=3.9e-22  Score=186.65  Aligned_cols=352  Identities=18%  Similarity=0.214  Sum_probs=234.3

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCC--ceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeeccc
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQ--NVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVG  102 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~--~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (490)
                      +..++|... ..+..+.||..+|+|+.|-|+.+  ..++||+.|++|++|.++...+..                ...+.
T Consensus        36 Iav~dp~k~-~i~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~~~~~----------------i~~~~   98 (764)
T KOG1063|consen   36 IAVADPEKI-LIVTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDEYLIK----------------IYTIQ   98 (764)
T ss_pred             EEEeCcccc-eeEEeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEeehheEE----------------EEeec
Confidence            455666544 67778999999999999999872  279999999999999998533111                11111


Q ss_pred             CCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecc--cCCeeEEEECCC-CCC
Q psy17682        103 GKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGH--KGPVLDIAWSPH-DDN  179 (490)
Q Consensus       103 ~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h--~~~V~~~~~~p~-~~~  179 (490)
                      +       ..+.++++....     ..+.....++.+.+|+.++.     +. -....+.--  .---.|+++.|+ +.-
T Consensus        99 g-------~~~~~~cv~a~~-----~~~~~~~ad~~v~vw~~~~~-----e~-~~~~~~rf~~k~~ipLcL~~~~~~~~~  160 (764)
T KOG1063|consen   99 G-------HCKECVCVVARS-----SVMTCKAADGTVSVWDKQQD-----EV-FLLAVLRFEIKEAIPLCLAALKNNKTF  160 (764)
T ss_pred             C-------cceeEEEEEeee-----eEEEeeccCceEEEeecCCC-----ce-eeehheehhhhhHhhHHHhhhccCCcE
Confidence            1       134455554432     22333478999999998411     10 011112111  222346666673 334


Q ss_pred             EEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCC--CCEEEEEeCCCcEEEEECCCCe--------
Q psy17682        180 VIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTA--QNVLLTAGSDNNVAIWNVGTGE--------  249 (490)
Q Consensus       180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~--~~~l~s~~~dg~v~iwd~~~~~--------  249 (490)
                      +++.|+.+..|.++.-...+.     .....+.||.+.|.+++|...+  ..+|++++.|..||||.+.-+.        
T Consensus       161 lla~Ggs~~~v~~~s~~~d~f-----~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e  235 (764)
T KOG1063|consen  161 LLACGGSKFVVDLYSSSADSF-----ARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNERE  235 (764)
T ss_pred             EEEecCcceEEEEeccCCcce-----eEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccc
Confidence            556677777788887554432     2344588999999999998764  3588999999999999864211        


Q ss_pred             -------------eEEE----------EecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee--eeee----ecC
Q psy17682        250 -------------IMIQ----------IECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIE--EEAV----CHE  300 (490)
Q Consensus       250 -------------~~~~----------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~----~~~  300 (490)
                                   ....          +.+|.+.|+++.|+|.+..|++++.|.++.+|...+..-+  ....    ++.
T Consensus       236 ~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~  315 (764)
T KOG1063|consen  236 DSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGS  315 (764)
T ss_pred             cccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeeccccc
Confidence                         1111          2389999999999999999999999999999987655322  1221    222


Q ss_pred             CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC-CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        301 GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD-EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       301 ~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      ..-.....|+|++..+++-+   ..|.+++|...... ........+|..+|..++|+|.|.+| ++.+.|.+-|+|---
T Consensus       316 a~GF~g~lw~~n~~~ii~~g---~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGefl-Lsvs~DQTTRlFa~w  391 (764)
T KOG1063|consen  316 AGGFWGGLWSPNSNVIIAHG---RTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFL-LSVSLDQTTRLFARW  391 (764)
T ss_pred             ccceeeEEEcCCCCEEEEec---ccCcEEEEeccCccceeeccccccccccceeeeecCCCCEE-EEeccccceeeeccc
Confidence            22378889999998887766   68899999833221 11222234678889999999999999 688899999998776


Q ss_pred             CCCCeeEEeeee-eCCCceeeEEEee-CceeEEee-cc-eeEEEEe
Q psy17682        380 AEPPFVHYINTF-QTPDPQRGIGMMP-KRGCDVNS-CE-IGRFFRL  421 (490)
Q Consensus       380 ~~~~~~~~~~~~-~~~~~i~~~~~sp-~~~~l~~~-~~-~~~~~~~  421 (490)
                      ..+.-.+.+.+. .|+..+++++|-+ +-++ +++ ++ ..|+|+.
T Consensus       392 g~q~~wHEiaRPQiHGyDl~c~~~vn~~~~F-VSgAdEKVlRvF~a  436 (764)
T KOG1063|consen  392 GRQQEWHEIARPQIHGYDLTCLSFVNEDLQF-VSGADEKVLRVFEA  436 (764)
T ss_pred             ccccceeeecccccccccceeeehccCCcee-eecccceeeeeecC
Confidence            332222333322 3556789999999 5444 554 44 6677775

>KOG2096|consensus

Probab=99.91  E-value=1.1e-22  Score=173.51  Aligned_cols=255  Identities=12%  Similarity=0.166  Sum_probs=185.7

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccc--ccccceeeecccccCEEEEEEeeCCCCEEEEEe
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISR--TLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG  235 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~  235 (490)
                      ...++||.+.|++++|+.+| ..|+|++.|++|++|++++-....  .+..   .+  .-+..+.+.|.||.+.++++..
T Consensus        79 ~~~LKgH~~~vt~~~FsSdG-K~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~---nv--e~dhpT~V~FapDc~s~vv~~~  152 (420)
T KOG2096|consen   79 VSVLKGHKKEVTDVAFSSDG-KKLATISGDRSIRLWDVRDFENKEHRCIRQ---NV--EYDHPTRVVFAPDCKSVVVSVK  152 (420)
T ss_pred             hhhhhccCCceeeeEEcCCC-ceeEEEeCCceEEEEecchhhhhhhhHhhc---cc--cCCCceEEEECCCcceEEEEEc
Confidence            45789999999999999998 899999999999999997532211  1100   01  1224578999999887888888


Q ss_pred             CCCcEEEEECCCCe---eEEE--------E-ecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCc
Q psy17682        236 SDNNVAIWNVGTGE---IMIQ--------I-ECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSK  303 (490)
Q Consensus       236 ~dg~v~iwd~~~~~---~~~~--------~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  303 (490)
                      ...++++|.+...+   ....        + +.|.-.+..+-...++.+|++++.|..|.+|+++ |+.+..+...... 
T Consensus       153 ~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~-  230 (420)
T KOG2096|consen  153 RGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSS-  230 (420)
T ss_pred             cCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeecccccc-
Confidence            88899999875322   1111        1 1355566677777788999999999999999999 8888887755543 


Q ss_pred             eeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC------CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEE
Q psy17682        304 ATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD------EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFE  377 (490)
Q Consensus       304 ~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd  377 (490)
                      .+..+.||+|+++++++   -.--+++|.+--.+      ....+...+|...|..++|+++.+.+ ++.+.||+++|||
T Consensus       231 n~~aavSP~GRFia~~g---FTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~-vtvSkDG~wriwd  306 (420)
T KOG2096|consen  231 NYDAAVSPDGRFIAVSG---FTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRA-VTVSKDGKWRIWD  306 (420)
T ss_pred             ccceeeCCCCcEEEEec---CCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCccee-EEEecCCcEEEee
Confidence            78889999999999887   56678999864221      11223344788889999999999998 8999999999999


Q ss_pred             ecCC----CCeeEEeee-----eeCCCceeeEEEeeCceeEEee-cceeEEEEecCCC
Q psy17682        378 ITAE----PPFVHYINT-----FQTPDPQRGIGMMPKRGCDVNS-CEIGRFFRLNNSG  425 (490)
Q Consensus       378 ~~~~----~~~~~~~~~-----~~~~~~i~~~~~sp~~~~l~~~-~~~~~~~~~~~~~  425 (490)
                      ..-.    +.. ..+..     ...+..-..++.+|.|..++.+ +..+++|..++++
T Consensus       307 tdVrY~~~qDp-k~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~  363 (420)
T KOG2096|consen  307 TDVRYEAGQDP-KILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGK  363 (420)
T ss_pred             ccceEecCCCc-hHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccCc
Confidence            8631    100 01111     1122233489999999887766 5688899887765

>KOG0650|consensus

Probab=99.91  E-value=1.1e-22  Score=187.22  Aligned_cols=299  Identities=16%  Similarity=0.177  Sum_probs=215.7

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      +.....+.||++.|.||.-.|.| ..|+|||+||+||||.+.++....                  ...      ....|
T Consensus       390 t~~~lvyrGHtg~Vr~iSvdp~G-~wlasGsdDGtvriWEi~TgRcvr------------------~~~------~d~~I  444 (733)
T KOG0650|consen  390 TRCALVYRGHTGLVRSISVDPSG-EWLASGSDDGTVRIWEIATGRCVR------------------TVQ------FDSEI  444 (733)
T ss_pred             ceeeeeEeccCCeEEEEEecCCc-ceeeecCCCCcEEEEEeecceEEE------------------EEe------eccee
Confidence            34556799999999999999998 999999999999999999976211                  000      12257


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCC-C----------------C------------CcccCCCCcceeecc
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPST-A----------------P------------NTGRINADHALVGGH  164 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~-~----------------~------------~~~~~~~~~~~~~~h  164 (490)
                      .+++|+|...   ..+++++.+.. +.+.+..-. .                .            ...+....+++.-.|
T Consensus       445 ~~vaw~P~~~---~~vLAvA~~~~-~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~  520 (733)
T KOG0650|consen  445 RSVAWNPLSD---LCVLAVAVGEC-VLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKH  520 (733)
T ss_pred             EEEEecCCCC---ceeEEEEecCc-eEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEec
Confidence            7888887742   23333333333 333322110 0                0            001111223345578


Q ss_pred             cCCeeEEEECCCCCCEEEEEeCC---CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEE
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSED---CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVA  241 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~  241 (490)
                      ...|..+.|+..| .+|++...+   ..|.|+++........+.       ...+.|.++.|+|... +|++++. ..|+
T Consensus       521 ~k~i~~vtWHrkG-DYlatV~~~~~~~~VliHQLSK~~sQ~PF~-------kskG~vq~v~FHPs~p-~lfVaTq-~~vR  590 (733)
T KOG0650|consen  521 PKSIRQVTWHRKG-DYLATVMPDSGNKSVLIHQLSKRKSQSPFR-------KSKGLVQRVKFHPSKP-YLFVATQ-RSVR  590 (733)
T ss_pred             CCccceeeeecCC-ceEEEeccCCCcceEEEEecccccccCchh-------hcCCceeEEEecCCCc-eEEEEec-cceE
Confidence            9999999999998 788887554   478899988776554433       3677899999999986 6766655 6899


Q ss_pred             EEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-ceeeeeeecCCCceeEEEEeCCCcEEEEEe
Q psy17682        242 IWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTG-AIEEEAVCHEGSKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       242 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~  320 (490)
                      |||+..++.+..+......|..++.+|.|..|+.++.|+.+..||+.-. ++.+++..|... ++.++|++.-.++++|+
T Consensus       591 iYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~a-vr~Va~H~ryPLfas~s  669 (733)
T KOG0650|consen  591 IYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKA-VRSVAFHKRYPLFASGS  669 (733)
T ss_pred             EEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhh-hhhhhhccccceeeeec
Confidence            9999988888777767778999999999999999999999999999865 566777777765 99999999999999999


Q ss_pred             CCCceeEEEEecCC------CCCCCeEEEec-cC----CCceeeeeecCCCCeEEEEecCCCeEEEE
Q psy17682        321 SKMSERQYSLRAPD------HLDEPIVMVEL-DT----SNGVMFPLYDPDTNLVYLCGKGDSVIRYF  376 (490)
Q Consensus       321 ~~~~~~~i~iwd~~------~~~~~~~~~~~-~~----~~~i~~~~~s~~~~~l~~~g~~dg~i~iw  376 (490)
                         .|+.+.++.-.      .......+..+ +|    .-+|..+.|+|...+| ++++.||+|++|
T Consensus       670 ---dDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWL-fsAGAd~tirlf  732 (733)
T KOG0650|consen  670 ---DDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWL-FSAGADGTIRLF  732 (733)
T ss_pred             ---CCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceE-EecCCCceEEee
Confidence               46777776432      11112222222 22    2358889999999999 567789999998

>KOG1034|consensus

Probab=99.91  E-value=8.9e-23  Score=174.85  Aligned_cols=301  Identities=13%  Similarity=0.140  Sum_probs=214.1

Q ss_pred             ecccccceeeeEEecc----CCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         39 DLLYHQRRVGLVLWHP----TAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        39 ~l~gH~~~V~~v~~~p----~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      ...+|+.+|..++|++    +.+..++|+|. +.+.++........               ..++..   ....+.....
T Consensus        33 l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~i---------------r~lq~y---~D~d~~Esfy   93 (385)
T KOG1034|consen   33 LKEDHNKPIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGI---------------RLLQSY---ADEDHDESFY   93 (385)
T ss_pred             hhccCCCccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccce---------------eeeeec---cCCCCCcceE
Confidence            4677999999999995    33467888887 56677775532100               011111   1112333445


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                      .++|+-+... -.-.+++++.-|.|+|++..     .   ......+.+|.+.|+.+.++|+..+++++++.|.+||+|+
T Consensus        94 tcsw~yd~~~-~~p~la~~G~~GvIrVid~~-----~---~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwn  164 (385)
T KOG1034|consen   94 TCSWSYDSNT-GNPFLAAGGYLGVIRVIDVV-----S---GQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWN  164 (385)
T ss_pred             EEEEEecCCC-CCeeEEeecceeEEEEEecc-----h---hhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEe
Confidence            5666655421 23456777899999999986     2   2244567899999999999999989999999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeE----------------------E
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIM----------------------I  252 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~----------------------~  252 (490)
                      +++..++..+..    +.+|.+.|.++.|++++. +++++|.|.++++|++...+..                      .
T Consensus       165 I~~~~Cv~VfGG----~egHrdeVLSvD~~~~gd-~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~  239 (385)
T KOG1034|consen  165 IQTDVCVAVFGG----VEGHRDEVLSVDFSLDGD-RIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKT  239 (385)
T ss_pred             ccCCeEEEEecc----cccccCcEEEEEEcCCCC-eeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCcccc
Confidence            999999887765    778999999999999997 9999999999999999732100                      0


Q ss_pred             ------EEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-Cce-------------eeeeeecCCCceeEEE--Ee
Q psy17682        253 ------QIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRT-GAI-------------EEEAVCHEGSKATRAI--YL  310 (490)
Q Consensus       253 ------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~-------------~~~~~~~~~~~~~~~~--~s  310 (490)
                            +-..|...|.|+.|-  |.++++-+-++.|..|.... ++.             +.++..... .+.-+.  |.
T Consensus       240 ~fp~fst~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c-~iWfirf~~d  316 (385)
T KOG1034|consen  240 HFPDFSTTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMC-DIWFIRFAFD  316 (385)
T ss_pred             ccccccccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCcc-ceEEEEEeec
Confidence                  112466677777776  68899999999999998731 111             112221222 244444  45


Q ss_pred             CCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec--cCCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        311 KSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL--DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       311 ~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      |-++.||.|.   ..|.+.+||++..+.+......  .....|...+|+.||..| +..+.|+.|.-||..
T Consensus       317 ~~~~~la~gn---q~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~l-v~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  317 PWQKMLALGN---QSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSIL-VLVCDDGTVWRWDRV  383 (385)
T ss_pred             HHHHHHhhcc---CCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEE-EEEeCCCcEEEEEee
Confidence            5588999998   7899999999987654332222  223458899999999999 556689999999864

>KOG0267|consensus

Probab=99.91  E-value=1.5e-24  Score=203.57  Aligned_cols=220  Identities=19%  Similarity=0.353  Sum_probs=187.3

Q ss_pred             EEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccc
Q psy17682        128 EEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEP  207 (490)
Q Consensus       128 ~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  207 (490)
                      ..+..++.+..+.+|...       + ...+..+.+|+.+|.++.|++.. .+|++|+.+|+|++||++..+.++.    
T Consensus        41 r~~~~Gg~~~k~~L~~i~-------k-p~~i~S~~~hespIeSl~f~~~E-~LlaagsasgtiK~wDleeAk~vrt----  107 (825)
T KOG0267|consen   41 RSLVTGGEDEKVNLWAIG-------K-PNAITSLTGHESPIESLTFDTSE-RLLAAGSASGTIKVWDLEEAKIVRT----  107 (825)
T ss_pred             eeeccCCCceeecccccc-------C-CchhheeeccCCcceeeecCcch-hhhcccccCCceeeeehhhhhhhhh----
Confidence            345667777777788665       1 12333578999999999999976 8999999999999999999887775    


Q ss_pred             eeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy17682        208 VVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINP  287 (490)
Q Consensus       208 ~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~  287 (490)
                         +.+|...+.++.|+|-+. ++++|+.|+.+++||.+...+...+.+|...+..+.|+|+|++++.++.|.+++|||+
T Consensus       108 ---Ltgh~~~~~sv~f~P~~~-~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~  183 (825)
T KOG0267|consen  108 ---LTGHLLNITSVDFHPYGE-FFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDL  183 (825)
T ss_pred             ---hhccccCcceeeeccceE-EeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeecc
Confidence               556999999999999996 8899999999999999988899999999999999999999999999999999999999


Q ss_pred             CCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEe
Q psy17682        288 RTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCG  367 (490)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g  367 (490)
                      ..|+....+..|.+. +..+.|+|...+++.|+   .|+++++||+++.+...  ..-....+|.+.+|+|++..+ .+|
T Consensus       184 ~agk~~~ef~~~e~~-v~sle~hp~e~Lla~Gs---~d~tv~f~dletfe~I~--s~~~~~~~v~~~~fn~~~~~~-~~G  256 (825)
T KOG0267|consen  184 TAGKLSKEFKSHEGK-VQSLEFHPLEVLLAPGS---SDRTVRFWDLETFEVIS--SGKPETDGVRSLAFNPDGKIV-LSG  256 (825)
T ss_pred             ccccccccccccccc-ccccccCchhhhhccCC---CCceeeeeccceeEEee--ccCCccCCceeeeecCCceee-ecC
Confidence            999999999988886 88899999999999998   79999999999754211  111234679999999999987 677


Q ss_pred             cCCC
Q psy17682        368 KGDS  371 (490)
Q Consensus       368 ~~dg  371 (490)
                      ..+.
T Consensus       257 ~q~s  260 (825)
T KOG0267|consen  257 EQIS  260 (825)
T ss_pred             chhh
Confidence            5443

>KOG4378|consensus

Probab=99.91  E-value=2e-22  Score=181.54  Aligned_cols=268  Identities=15%  Similarity=0.154  Sum_probs=208.0

Q ss_pred             eeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccc
Q psy17682         46 RVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKE  125 (490)
Q Consensus        46 ~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~  125 (490)
                      .|+.++|+....-..++.+.|..+++|.-... .+.                +...+..++. ...++.+..+|      
T Consensus        36 g~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~-~~~----------------Vp~~~k~~gd-~~~Cv~~~s~S------   91 (673)
T KOG4378|consen   36 GDFSFNWQRRNFLVVASMAGDKVMRIKEKDGK-TPE----------------VPRVRKLTGD-NAFCVACASQS------   91 (673)
T ss_pred             cceeeeccccceEEEeecCCceeEEEecccCC-CCc----------------cceeeccccc-hHHHHhhhhcc------
Confidence            39999999887545566677899999964432 111                0011111111 22234444443      


Q ss_pred             eEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccc
Q psy17682        126 FKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLT  205 (490)
Q Consensus       126 ~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  205 (490)
                        -++.+++..+.+.||++.        .....+.+++|+..|+++.++..+ .+||+++..|.|.|..+.++.....+.
T Consensus        92 --~y~~sgG~~~~Vkiwdl~--------~kl~hr~lkdh~stvt~v~YN~~D-eyiAsvs~gGdiiih~~~t~~~tt~f~  160 (673)
T KOG4378|consen   92 --LYEISGGQSGCVKIWDLR--------AKLIHRFLKDHQSTVTYVDYNNTD-EYIASVSDGGDIIIHGTKTKQKTTTFT  160 (673)
T ss_pred             --eeeeccCcCceeeehhhH--------HHHHhhhccCCcceeEEEEecCCc-ceeEEeccCCcEEEEecccCcccccee
Confidence              367889999999999984        233567789999999999999876 899999999999999999887665554


Q ss_pred             cceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE-ecCCCcEEEEEEcC-CCCEEEEEeCCCeEE
Q psy17682        206 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI-ECHPDIVYSASWNW-DGSKLLTTCKDKKMR  283 (490)
Q Consensus       206 ~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~  283 (490)
                      .      +....|.-+.|+|..+.+|.+++.+|.|.+||+....++..+ +.|..+...++|+| +..+|++.+.|..|.
T Consensus       161 ~------~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~  234 (673)
T KOG4378|consen  161 I------DSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKIN  234 (673)
T ss_pred             c------CCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEE
Confidence            2      134567899999999889999999999999999887777665 47999999999999 556889999999999


Q ss_pred             EEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCC
Q psy17682        284 IINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDT  360 (490)
Q Consensus       284 iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~  360 (490)
                      +||++..+....+...  .+.+.++|+++|.+|++|.   ..|.|..||++..+.|+.... .|...|++++|-|.-
T Consensus       235 ~yD~~s~~s~~~l~y~--~Plstvaf~~~G~~L~aG~---s~G~~i~YD~R~~k~Pv~v~s-ah~~sVt~vafq~s~  305 (673)
T KOG4378|consen  235 IYDIRSQASTDRLTYS--HPLSTVAFSECGTYLCAGN---SKGELIAYDMRSTKAPVAVRS-AHDASVTRVAFQPSP  305 (673)
T ss_pred             Eeecccccccceeeec--CCcceeeecCCceEEEeec---CCceEEEEecccCCCCceEee-ecccceeEEEeeecc
Confidence            9999988777666532  2489999999999999998   789999999999888887765 455679999997764

>KOG0267|consensus

Probab=99.91  E-value=1.7e-24  Score=203.13  Aligned_cols=234  Identities=14%  Similarity=0.204  Sum_probs=198.4

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCc
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNN  239 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~  239 (490)
                      .+..|...|.|+..-..+ +.+++|+.|..+.+|.+..-..+.       .+.+|..+|.++.|++... +|++|+.+|+
T Consensus        23 ~~~~hsaav~~lk~~~s~-r~~~~Gg~~~k~~L~~i~kp~~i~-------S~~~hespIeSl~f~~~E~-Llaagsasgt   93 (825)
T KOG0267|consen   23 EFVAHSAAVGCLKIRKSS-RSLVTGGEDEKVNLWAIGKPNAIT-------SLTGHESPIESLTFDTSER-LLAAGSASGT   93 (825)
T ss_pred             hhhhhhhhhceeeeeccc-eeeccCCCceeeccccccCCchhh-------eeeccCCcceeeecCcchh-hhcccccCCc
Confidence            345799999999985555 899999999999999876543333       3678999999999999984 9999999999


Q ss_pred             EEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682        240 VAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG  319 (490)
Q Consensus       240 v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~  319 (490)
                      |++||+..++.++++.+|...+.++.|+|-+.+++.|+.|+.+++||++...+...+.+|... +..+.|+|+|++++.|
T Consensus        94 iK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~v-v~~l~lsP~Gr~v~~g  172 (825)
T KOG0267|consen   94 IKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRV-VDVLRLSPDGRWVASG  172 (825)
T ss_pred             eeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcce-eEEEeecCCCceeecc
Confidence            999999999999999999999999999999999999999999999999999999999987764 8999999999999999


Q ss_pred             eCCCceeEEEEecCCCCCCCeEEEec-cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCce
Q psy17682        320 FSKMSERQYSLRAPDHLDEPIVMVEL-DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQ  397 (490)
Q Consensus       320 ~~~~~~~~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i  397 (490)
                      +   .|..++|||...++.   ..++ .|...+..+.|+|..-.+ ++|+.|+++++||+++-+    .+...+ ....|
T Consensus       173 ~---ed~tvki~d~~agk~---~~ef~~~e~~v~sle~hp~e~Ll-a~Gs~d~tv~f~dletfe----~I~s~~~~~~~v  241 (825)
T KOG0267|consen  173 G---EDNTVKIWDLTAGKL---SKEFKSHEGKVQSLEFHPLEVLL-APGSSDRTVRFWDLETFE----VISSGKPETDGV  241 (825)
T ss_pred             C---Ccceeeeeccccccc---ccccccccccccccccCchhhhh-ccCCCCceeeeeccceeE----EeeccCCccCCc
Confidence            8   589999999987663   2233 366779999999987666 999999999999999754    222211 24679


Q ss_pred             eeEEEeeCceeEEeecc
Q psy17682        398 RGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       398 ~~~~~sp~~~~l~~~~~  414 (490)
                      .+++|+|++..+.+|+.
T Consensus       242 ~~~~fn~~~~~~~~G~q  258 (825)
T KOG0267|consen  242 RSLAFNPDGKIVLSGEQ  258 (825)
T ss_pred             eeeeecCCceeeecCch
Confidence            99999999998888865

>KOG0321|consensus

Probab=99.91  E-value=1.8e-22  Score=187.23  Aligned_cols=294  Identities=15%  Similarity=0.188  Sum_probs=206.2

Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI  195 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~  195 (490)
                      ..|++.  .....+++.+..+|.|.+++.....-.  -...++.....|.+.|..+.|.| |+..|++++.|.++++||+
T Consensus        55 ~sFs~~--~n~eHiLavadE~G~i~l~dt~~~~fr--~ee~~lk~~~aH~nAifDl~wap-ge~~lVsasGDsT~r~Wdv  129 (720)
T KOG0321|consen   55 DSFSAA--PNKEHILAVADEDGGIILFDTKSIVFR--LEERQLKKPLAHKNAIFDLKWAP-GESLLVSASGDSTIRPWDV  129 (720)
T ss_pred             ccccCC--CCccceEEEecCCCceeeecchhhhcc--hhhhhhcccccccceeEeeccCC-CceeEEEccCCceeeeeee
Confidence            344443  455678889999999999987521111  01123456678999999999999 7799999999999999999


Q ss_pred             CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe--------------------------
Q psy17682        196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE--------------------------  249 (490)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~--------------------------  249 (490)
                      ++.++...-     .+.+|...|.+++|.|.++..|++|+.||.|.|||++-..                          
T Consensus       130 k~s~l~G~~-----~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~  204 (720)
T KOG0321|consen  130 KTSRLVGGR-----LNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLK  204 (720)
T ss_pred             ccceeecce-----eecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhh
Confidence            988776541     2567999999999999999999999999999999987321                          


Q ss_pred             -eEEEEecCCCcEEE---EEEcCCCCEEEEEeC-CCeEEEEeCCCCceeeeee--------ecC--CCceeEEEEeCCCc
Q psy17682        250 -IMIQIECHPDIVYS---ASWNWDGSKLLTTCK-DKKMRIINPRTGAIEEEAV--------CHE--GSKATRAIYLKSGL  314 (490)
Q Consensus       250 -~~~~~~~~~~~v~~---~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~--------~~~--~~~~~~~~~s~~~~  314 (490)
                       .+..-..+...|.+   +.+..|...|++++. |+.|++||+++........        .|.  ...+.++.....|.
T Consensus       205 kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt  284 (720)
T KOG0321|consen  205 KRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGT  284 (720)
T ss_pred             ccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCC
Confidence             01111223344554   556668889999887 9999999999765332221        121  11256666666677


Q ss_pred             EEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCc--eeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee
Q psy17682        315 IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNG--VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ  392 (490)
Q Consensus       315 ~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~--i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~  392 (490)
                      +|.+.+   .|+.|++|++............++...  ...-..+||+.+| ++|+.|...++|.+...+.....  ...
T Consensus       285 ~L~AsC---tD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l-~SgSsd~~ayiw~vs~~e~~~~~--l~G  358 (720)
T KOG0321|consen  285 YLFASC---TDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSL-LSGSSDEQAYIWVVSSPEAPPAL--LLG  358 (720)
T ss_pred             eEEEEe---cCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceE-eccCCCcceeeeeecCccCChhh--hhC
Confidence            776666   699999999997654222222122111  2233568999999 89999999999999987633222  234


Q ss_pred             CCCceeeEEEeeCc--eeEEeec-ceeEEEEecCCC
Q psy17682        393 TPDPQRGIGMMPKR--GCDVNSC-EIGRFFRLNNSG  425 (490)
Q Consensus       393 ~~~~i~~~~~sp~~--~~l~~~~-~~~~~~~~~~~~  425 (490)
                      +...|+.++|.|..  ..+.+++ ..+++|++..+-
T Consensus       359 ht~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~l  394 (720)
T KOG0321|consen  359 HTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNGL  394 (720)
T ss_pred             cceEEEEEeeccccCCCceeeccCcceEEEeccCch
Confidence            55679999999854  4445543 378999997643

>KOG1009|consensus

Probab=99.90  E-value=6.3e-22  Score=174.29  Aligned_cols=308  Identities=15%  Similarity=0.193  Sum_probs=213.3

Q ss_pred             ccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccc
Q psy17682         43 HQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDY  122 (490)
Q Consensus        43 H~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  122 (490)
                      -..+|..+.|.+.....|+|||.|..|+||.+..+....                                         
T Consensus        12 ~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~-----------------------------------------   50 (434)
T KOG1009|consen   12 DHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGG-----------------------------------------   50 (434)
T ss_pred             CCCceEEEEeccCcccceecccCccceeeeeeeecCCCC-----------------------------------------
Confidence            346899999999886699999999999999887654110                                         


Q ss_pred             ccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC---
Q psy17682        123 VKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG---  199 (490)
Q Consensus       123 ~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~---  199 (490)
                                  ++..+.                ....+..|...|+++.|+|+| .+||+|+.+|.|.+|....-.   
T Consensus        51 ------------~~~~V~----------------y~s~Ls~H~~aVN~vRf~p~g-elLASg~D~g~v~lWk~~~~~~~~  101 (434)
T KOG1009|consen   51 ------------GDMKVE----------------YLSSLSRHTRAVNVVRFSPDG-ELLASGGDGGEVFLWKQGDVRIFD  101 (434)
T ss_pred             ------------CceeEE----------------EeecccCCcceeEEEEEcCCc-CeeeecCCCceEEEEEecCcCCcc
Confidence                        000111                122567899999999999998 899999999999999865211   


Q ss_pred             ---ccccc---ccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682        200 ---ISRTL---TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       200 ---~~~~~---~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  273 (490)
                         +....   -.-...+.+|...|..++|+|++ +++++++.|..+++||+..|+....+..|...+..++|.|.++++
T Consensus       102 ~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~-~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv  180 (434)
T KOG1009|consen  102 ADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDS-NFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYV  180 (434)
T ss_pred             ccchhhhCccceEEEEEecccccchhhhhccCCC-ceeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhh
Confidence               00000   01224467799999999999999 599999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCeEEEEeCCCCceeeeee-------------------ecC---CCceeEEEEeCCCcEEEEEeCC-----Cc-e
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEAV-------------------CHE---GSKATRAIYLKSGLIFTTGFSK-----MS-E  325 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~~-------------------~~~---~~~~~~~~~s~~~~~l~~~~~~-----~~-~  325 (490)
                      ++-+.|...+.+++...+.+....                   -|.   ......+.|+|+|.++++...-     +. -
T Consensus       181 ~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~~g~~~~~  260 (434)
T KOG1009|consen  181 ASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFR  260 (434)
T ss_pred             hhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccceeeeCCceee
Confidence            999999988887776443222111                   011   1124678899999999876420     01 2


Q ss_pred             eEEEEecCCCCCCCeEEEeccCCCceeeeeecC-----------------CCCeEEEEecCCCeEEEEEecCCCCeeEEe
Q psy17682        326 RQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDP-----------------DTNLVYLCGKGDSVIRYFEITAEPPFVHYI  388 (490)
Q Consensus       326 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~-----------------~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~  388 (490)
                      +..++++-....+|..... ........+.|+|                 -.+.+++.++ ...|++||.++..|+....
T Consensus       261 n~tYvfsrk~l~rP~~~lp-~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt-~~svyvydtq~~~P~~~v~  338 (434)
T KOG1009|consen  261 NTSYVFSRKDLKRPAARLP-SPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIAT-KNSVYVYDTQTLEPLAVVD  338 (434)
T ss_pred             ceeEeeccccccCceeecC-CCCcceEEEEeeeeEEEeccccccccccccccceEEEEee-cceEEEeccccccceEEEe
Confidence            3445666554444332211 1112222333322                 2345555554 4579999999988775444


Q ss_pred             eeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCC
Q psy17682        389 NTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSG  425 (490)
Q Consensus       389 ~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~  425 (490)
                      ..  |-..|+.++|++||.+++.+  ++...+.-++..+
T Consensus       339 ni--hy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~e  375 (434)
T KOG1009|consen  339 NI--HYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWE  375 (434)
T ss_pred             ee--eeeeecceeecCCCcEEEEeccCCceEEEEEcchh
Confidence            43  33589999999999876655  4455555555554

>KOG0302|consensus

Probab=99.90  E-value=3.5e-22  Score=174.15  Aligned_cols=254  Identities=15%  Similarity=0.191  Sum_probs=189.4

Q ss_pred             ecccCCeeEEEECCCC-CCEEEEEeCCCcEEEEECCCC---------CcccccccceeeecccccCEEEEEEeeCCCCEE
Q psy17682        162 GGHKGPVLDIAWSPHD-DNVIASGSEDCVVKVWQIPDG---------GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVL  231 (490)
Q Consensus       162 ~~h~~~V~~~~~~p~~-~~~l~s~~~dg~i~iwd~~~~---------~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l  231 (490)
                      -+|.+.++.+.-.+.+ ..+.++-++.|.|+||++...         ........|+.++.+|...-+.+.|+|-..-.|
T Consensus       148 i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~L  227 (440)
T KOG0302|consen  148 IPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRL  227 (440)
T ss_pred             cccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccccc
Confidence            4788888888887764 467788899999999998531         111233468888999999999999999644468


Q ss_pred             EEEeCCCcEEEEECCCCeeE---EEEecCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCc---eeeeeeecCCCce
Q psy17682        232 LTAGSDNNVAIWNVGTGEIM---IQIECHPDIVYSASWNWDG-SKLLTTCKDKKMRIINPRTGA---IEEEAVCHEGSKA  304 (490)
Q Consensus       232 ~s~~~dg~v~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~  304 (490)
                      ++|..-+.|++|...++.-.   .-+.+|...|-.++|||.. ..|++||.||+|+|||+|.+.   ++.+ +.|.+. +
T Consensus       228 lsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~-kAh~sD-V  305 (440)
T KOG0302|consen  228 LSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST-KAHNSD-V  305 (440)
T ss_pred             ccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe-eccCCc-e
Confidence            99988899999999886532   2245799999999999954 689999999999999999883   3333 567764 9


Q ss_pred             eEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe-ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682        305 TRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE-LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP  383 (490)
Q Consensus       305 ~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~  383 (490)
                      ..+.|+..-.+|++|+   .+|+++|||++..+....+.. ..|..+|+++.|+|...-++++++.|.+|.+||+.....
T Consensus       306 NVISWnr~~~lLasG~---DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D  382 (440)
T KOG0302|consen  306 NVISWNRREPLLASGG---DDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEAD  382 (440)
T ss_pred             eeEEccCCcceeeecC---CCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCC
Confidence            9999999977999998   589999999997654322222 246788999999998877778899999999999974321


Q ss_pred             ---------------eeEEeeeeeCCCceeeEEEeeCce-eEEee-cceeEEEE
Q psy17682        384 ---------------FVHYINTFQTPDPQRGIGMMPKRG-CDVNS-CEIGRFFR  420 (490)
Q Consensus       384 ---------------~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~-~~~~~~~~  420 (490)
                                     ..+.+-.+.+...+..+.|+++-. ++++. .+-+++|+
T Consensus       383 ~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGfnVfk  436 (440)
T KOG0302|consen  383 EEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGFNVFK  436 (440)
T ss_pred             hhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccceeEEE
Confidence                           111333334445688899998642 34433 33446665

>KOG1034|consensus

Probab=99.90  E-value=1e-21  Score=168.40  Aligned_cols=296  Identities=17%  Similarity=0.269  Sum_probs=203.8

Q ss_pred             cccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCccee--ecccCCeeEEEECCC---CCCEEEEE
Q psy17682        110 NSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALV--GGHKGPVLDIAWSPH---DDNVIASG  184 (490)
Q Consensus       110 ~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~--~~h~~~V~~~~~~p~---~~~~l~s~  184 (490)
                      ...+..++|.+-....... +.+..+...+.+|...    ..+... .++.+  ..|...-..++|+-+   +..++|.|
T Consensus        38 ~~~I~gv~fN~~~~~~e~~-vfatvG~~rvtiy~c~----~d~~ir-~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~  111 (385)
T KOG1034|consen   38 NKPIFGVAFNSFLGCDEPQ-VFATVGGNRVTIYECP----GDGGIR-LLQSYADEDHDESFYTCSWSYDSNTGNPFLAAG  111 (385)
T ss_pred             CCccceeeeehhcCCCCCc-eEEEeCCcEEEEEEEC----Ccccee-eeeeccCCCCCcceEEEEEEecCCCCCeeEEee
Confidence            3456667765433222233 3334455567777664    222111 11111  247778888888653   34689999


Q ss_pred             eCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe---cCCCcE
Q psy17682        185 SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE---CHPDIV  261 (490)
Q Consensus       185 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---~~~~~v  261 (490)
                      +.-|.|+|.|+.++++...       +.+|...|..+.++|...+++++++.|..||+|++++..++..+.   +|.+.|
T Consensus       112 G~~GvIrVid~~~~~~~~~-------~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeV  184 (385)
T KOG1034|consen  112 GYLGVIRVIDVVSGQCSKN-------YRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEV  184 (385)
T ss_pred             cceeEEEEEecchhhhccc-------eeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcE
Confidence            9999999999999887765       557999999999999998999999999999999999999988875   799999


Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee------------------ecCCCceeEEEEeCC--------CcE
Q psy17682        262 YSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV------------------CHEGSKATRAIYLKS--------GLI  315 (490)
Q Consensus       262 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------------------~~~~~~~~~~~~s~~--------~~~  315 (490)
                      .++.|+++|.+|++++.|.+|++|++...+....+.                  .|-. ..+....+.+        |.+
T Consensus       185 LSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp-~fst~diHrnyVDCvrw~gd~  263 (385)
T KOG1034|consen  185 LSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFP-DFSTTDIHRNYVDCVRWFGDF  263 (385)
T ss_pred             EEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccc-cccccccccchHHHHHHHhhh
Confidence            999999999999999999999999998432111110                  0000 0011111221        566


Q ss_pred             EEEEeCCCceeEEEEecCCCCCCC-----------eEEEecc-CCCceeee--eecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        316 FTTGFSKMSERQYSLRAPDHLDEP-----------IVMVELD-TSNGVMFP--LYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       316 l~~~~~~~~~~~i~iwd~~~~~~~-----------~~~~~~~-~~~~i~~~--~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      +++-+   .++.|..|.....+..           ..+..+. ....|+-+  +|.|-++.| |.|...|.|++||++..
T Consensus       264 ilSks---cenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~l-a~gnq~g~v~vwdL~~~  339 (385)
T KOG1034|consen  264 ILSKS---CENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKML-ALGNQSGKVYVWDLDNN  339 (385)
T ss_pred             eeecc---cCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHH-hhccCCCcEEEEECCCC
Confidence            66655   5778999987322211           0111111 12234444  556777888 88999999999999988


Q ss_pred             CCe-eEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecC
Q psy17682        382 PPF-VHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNN  423 (490)
Q Consensus       382 ~~~-~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~  423 (490)
                      +|. ...+........|+..+||.|+.+++..++...+|+++.
T Consensus       340 ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdr  382 (385)
T KOG1034|consen  340 EPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDR  382 (385)
T ss_pred             CCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEe
Confidence            763 233333344567999999999999999998888888653

>KOG0268|consensus

Probab=99.90  E-value=4.9e-23  Score=178.55  Aligned_cols=247  Identities=12%  Similarity=0.148  Sum_probs=187.9

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      ....++..|.+.|..|++..   ..++|+|+|++|+.|.+.......         . ........+.+           
T Consensus       100 ~~~~~f~AH~G~V~Gi~v~~---~~~~tvgdDKtvK~wk~~~~p~~t---------i-lg~s~~~gIdh-----------  155 (433)
T KOG0268|consen  100 ECIRTFKAHEGLVRGICVTQ---TSFFTVGDDKTVKQWKIDGPPLHT---------I-LGKSVYLGIDH-----------  155 (433)
T ss_pred             hhhheeecccCceeeEEecc---cceEEecCCcceeeeeccCCccee---------e-ecccccccccc-----------
Confidence            45667899999999999987   459999999999999876521000         0 00001110000           


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                       .        ...+.  .+..+..|.||+..        ...+++.+.--.+.|.++.|+|....+|++|+.|+.|.|||
T Consensus       156 -~--------~~~~~--FaTcGe~i~IWD~~--------R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD  216 (433)
T KOG0268|consen  156 -H--------RKNSV--FATCGEQIDIWDEQ--------RDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYD  216 (433)
T ss_pred             -c--------ccccc--ccccCceeeecccc--------cCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEe
Confidence             0        00111  13445678899885        23345556666788999999998878999999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC-eeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG-EIMIQIECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l  273 (490)
                      ++++..++.+.        -...-..++|+|.+ ..|++|++|..++.||++.- .++....+|.+.|.+++|+|.|+.|
T Consensus       217 ~R~~~Pl~KVi--------~~mRTN~IswnPea-fnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~Ef  287 (433)
T KOG0268|consen  217 LRQASPLKKVI--------LTMRTNTICWNPEA-FNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEF  287 (433)
T ss_pred             cccCCccceee--------eeccccceecCccc-cceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchh
Confidence            99998777543        34456789999966 68999999999999999865 4677788999999999999999999


Q ss_pred             EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL  336 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~  336 (490)
                      ++||.|.+|+||..+.+..-..+....-..+.++.||.|.+++++|+   .|+.|++|.....
T Consensus       288 vsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGS---dd~nvRlWka~As  347 (433)
T KOG0268|consen  288 VSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGS---DDGNVRLWKAKAS  347 (433)
T ss_pred             ccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecC---CCcceeeeecchh
Confidence            99999999999999987655444333334599999999999999999   5889999987643

>KOG2048|consensus

Probab=99.90  E-value=7.6e-21  Score=177.79  Aligned_cols=353  Identities=14%  Similarity=0.155  Sum_probs=244.3

Q ss_pred             cceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccc
Q psy17682         44 QRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYV  123 (490)
Q Consensus        44 ~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  123 (490)
                      ...|.+++|+.+. +.||.+=.||.|.||++..+-+                   ....-.+  ..++.+..++|++.. 
T Consensus        25 Ps~I~slA~s~kS-~~lAvsRt~g~IEiwN~~~~w~-------------------~~~vi~g--~~drsIE~L~W~e~~-   81 (691)
T KOG2048|consen   25 PSEIVSLAYSHKS-NQLAVSRTDGNIEIWNLSNNWF-------------------LEPVIHG--PEDRSIESLAWAEGG-   81 (691)
T ss_pred             ccceEEEEEeccC-CceeeeccCCcEEEEccCCCce-------------------eeEEEec--CCCCceeeEEEccCC-
Confidence            4579999999999 7899999999999999987432                   1111111  245678999999663 


Q ss_pred             cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc
Q psy17682        124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT  203 (490)
Q Consensus       124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~  203 (490)
                           -+.+.+.+|.|.-|++.        ..++...+....+.|++++.+|.+ ..++.|++||.+..++...++....
T Consensus        82 -----RLFS~g~sg~i~EwDl~--------~lk~~~~~d~~gg~IWsiai~p~~-~~l~IgcddGvl~~~s~~p~~I~~~  147 (691)
T KOG2048|consen   82 -----RLFSSGLSGSITEWDLH--------TLKQKYNIDSNGGAIWSIAINPEN-TILAIGCDDGVLYDFSIGPDKITYK  147 (691)
T ss_pred             -----eEEeecCCceEEEEecc--------cCceeEEecCCCcceeEEEeCCcc-ceEEeecCCceEEEEecCCceEEEE
Confidence                 56678999999999996        222444566778999999999988 8999999999888888776655432


Q ss_pred             cccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe--------cCCCcEEEEEEcCCCCEEEE
Q psy17682        204 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE--------CHPDIVYSASWNWDGSKLLT  275 (490)
Q Consensus       204 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~  275 (490)
                      .     .+....++|.++.|+|++. .+++|+.||.|++||..++..+....        ....-|+++.+-.+ ..|++
T Consensus       148 r-----~l~rq~sRvLslsw~~~~~-~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd-~tI~s  220 (691)
T KOG2048|consen  148 R-----SLMRQKSRVLSLSWNPTGT-KIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRD-STIAS  220 (691)
T ss_pred             e-----ecccccceEEEEEecCCcc-EEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeec-CcEEE
Confidence            2     2333568999999999994 89999999999999999988766222        12234677777744 57999


Q ss_pred             EeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe--EEEeccCCCceee
Q psy17682        276 TCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI--VMVELDTSNGVMF  353 (490)
Q Consensus       276 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~--~~~~~~~~~~i~~  353 (490)
                      |..-|+|.+||...+.+++.+..|... +.+++..+++..+.+++   .|+.+..+...+.....  ......|...+.+
T Consensus       221 gDS~G~V~FWd~~~gTLiqS~~~h~ad-Vl~Lav~~~~d~vfsaG---vd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs  296 (691)
T KOG2048|consen  221 GDSAGTVTFWDSIFGTLIQSHSCHDAD-VLALAVADNEDRVFSAG---VDPKIIQYSLTTNKSEWVINSRRDLHAHDVRS  296 (691)
T ss_pred             ecCCceEEEEcccCcchhhhhhhhhcc-eeEEEEcCCCCeEEEcc---CCCceEEEEecCCccceeeeccccCCccccee
Confidence            999999999999999999999988876 99999999987777776   68888777776654321  1122346667888


Q ss_pred             eeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCcee-eEEEeeCceeEEee-cceeEEEEecCCC------
Q psy17682        354 PLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQR-GIGMMPKRGCDVNS-CEIGRFFRLNNSG------  425 (490)
Q Consensus       354 ~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~-~~~~sp~~~~l~~~-~~~~~~~~~~~~~------  425 (490)
                      ++..++  .+ ++|+.|..+.+-.....+..-..   .....+-. -+...|..++++.- ...+.+|.+-...      
T Consensus       297 ~av~~~--~l-~sgG~d~~l~i~~s~~~~~~~h~---~~~~~p~~~~v~~a~~~~L~~~w~~h~v~lwrlGS~~~~g~~~  370 (691)
T KOG2048|consen  297 MAVIEN--AL-ISGGRDFTLAICSSREFKNMDHR---QKNLFPASDRVSVAPENRLLVLWKAHGVDLWRLGSVILQGEYN  370 (691)
T ss_pred             eeeecc--eE-EecceeeEEEEccccccCchhhh---ccccccccceeecCccceEEEEeccccccceeccCcccccccC
Confidence            888877  45 78999999888766653211111   11111111 12333444444444 3355666655441      


Q ss_pred             ceEEEEEEEeCCCcCcccCCCCCCC
Q psy17682        426 LCQVVSMTVPRKSELFQDDLYPDTV  450 (490)
Q Consensus       426 ~~~~i~~~~p~~~~~~~~~~~~~~~  450 (490)
                      ...-+.+.++.+..+.+..+.|++.
T Consensus       371 ~~~Llkl~~k~~~nIs~~aiSPdg~  395 (691)
T KOG2048|consen  371 YIHLLKLFTKEKENISCAAISPDGN  395 (691)
T ss_pred             hhhheeeecCCccceeeeccCCCCC
Confidence            1112233444455555555555543

>KOG0270|consensus

Probab=99.90  E-value=6.1e-22  Score=176.30  Aligned_cols=252  Identities=16%  Similarity=0.217  Sum_probs=187.0

Q ss_pred             eeEEEECCC------CCCEEEEEeCCCcEEEEECCCCCccc--------------ccccceeeecccccCEEEEEEeeCC
Q psy17682        168 VLDIAWSPH------DDNVIASGSEDCVVKVWQIPDGGISR--------------TLTEPVVDLLYHQRRVGLVLWHPTA  227 (490)
Q Consensus       168 V~~~~~~p~------~~~~l~s~~~dg~i~iwd~~~~~~~~--------------~~~~~~~~~~~~~~~v~~~~~~p~~  227 (490)
                      -.|+.|.-.      .++++|.|+.|..|.|||+.-...+.              ..........+|...|..++|+..-
T Consensus       176 PLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~  255 (463)
T KOG0270|consen  176 PLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNF  255 (463)
T ss_pred             chhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcccc
Confidence            356666432      13799999999999999986322110              0001111234689999999999998


Q ss_pred             CCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeE
Q psy17682        228 QNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW-DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATR  306 (490)
Q Consensus       228 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  306 (490)
                      +++|++||.|.+|++||+.++++..++..|...|.++.|+| ....|++|+.|+++.+.|+|........-...+ .+-.
T Consensus       256 ~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g-~VEk  334 (463)
T KOG0270|consen  256 RNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDG-EVEK  334 (463)
T ss_pred             ceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEecc-ceEE
Confidence            89999999999999999999999999999999999999999 567999999999999999995433222222233 3889


Q ss_pred             EEEeCCCc-EEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCee
Q psy17682        307 AIYLKSGL-IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFV  385 (490)
Q Consensus       307 ~~~s~~~~-~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~  385 (490)
                      ++|.|... .+.+++   .+|+++-+|+|....+.... ..|..+|.++++++....++++++.|+.|++|++....+-.
T Consensus       335 v~w~~~se~~f~~~t---ddG~v~~~D~R~~~~~vwt~-~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~  410 (463)
T KOG0270|consen  335 VAWDPHSENSFFVST---DDGTVYYFDIRNPGKPVWTL-KAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKS  410 (463)
T ss_pred             EEecCCCceeEEEec---CCceEEeeecCCCCCceeEE-EeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcc
Confidence            99998744 555665   58999999999886554443 36778999999999988888999999999999998776433


Q ss_pred             EEeeeeeCCCceeeEEEeeCcee-EEeecc--eeEEEEecCCC
Q psy17682        386 HYINTFQTPDPQRGIGMMPKRGC-DVNSCE--IGRFFRLNNSG  425 (490)
Q Consensus       386 ~~~~~~~~~~~i~~~~~sp~~~~-l~~~~~--~~~~~~~~~~~  425 (490)
                      .....+.- +...+.++.|+-.+ ++.|+.  ..++|++.+..
T Consensus       411 v~~~~~~~-~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~  452 (463)
T KOG0270|consen  411 VKEHSFKL-GRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNS  452 (463)
T ss_pred             cccccccc-cceeecccCCCcceEEEecCccceEEEeecccCh
Confidence            22222222 23567777787544 444433  57899987765

>KOG4378|consensus

Probab=99.89  E-value=3e-21  Score=174.03  Aligned_cols=266  Identities=10%  Similarity=0.081  Sum_probs=197.2

Q ss_pred             cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceee-cccCCeeEEEECCCCCCEEEEEeCCCcE
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVG-GHKGPVLDIAWSPHDDNVIASGSEDCVV  190 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~~~dg~i  190 (490)
                      .+.++.|+...    .-+++..+++..+++|.-.      +++. .+..+. ...+.-.|++..... .++++|+..+.|
T Consensus        36 g~~s~~w~~~n----~lvvas~~gdk~~~~~~K~------g~~~-~Vp~~~k~~gd~~~Cv~~~s~S-~y~~sgG~~~~V  103 (673)
T KOG4378|consen   36 GDFSFNWQRRN----FLVVASMAGDKVMRIKEKD------GKTP-EVPRVRKLTGDNAFCVACASQS-LYEISGGQSGCV  103 (673)
T ss_pred             cceeeeccccc----eEEEeecCCceeEEEeccc------CCCC-ccceeeccccchHHHHhhhhcc-eeeeccCcCcee
Confidence            36777776552    3456677778888888754      2211 122221 112244455554444 799999999999


Q ss_pred             EEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecC-CCcEEEEEEcCC
Q psy17682        191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH-PDIVYSASWNWD  269 (490)
Q Consensus       191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~  269 (490)
                      +|||++...+.+.       +.+|...|+++.++.... +|++++..|.|.|..+.++.....|... ...|.-+.|+|.
T Consensus       104 kiwdl~~kl~hr~-------lkdh~stvt~v~YN~~De-yiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~s  175 (673)
T KOG4378|consen  104 KIWDLRAKLIHRF-------LKDHQSTVTYVDYNNTDE-YIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPS  175 (673)
T ss_pred             eehhhHHHHHhhh-------ccCCcceeEEEEecCCcc-eeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccc
Confidence            9999984444333       556999999999999886 9999999999999999998877777733 345668999996


Q ss_pred             CC-EEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc-EEEEEeCCCceeEEEEecCCCCCCCeEEEeccC
Q psy17682        270 GS-KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL-IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDT  347 (490)
Q Consensus       270 ~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~  347 (490)
                      .+ +|.+++.+|.|.+||+....++..+......+...++|+|... +|++-+   .|..|.+||.+.......+   .-
T Consensus       176 kr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG---~Dkki~~yD~~s~~s~~~l---~y  249 (673)
T KOG4378|consen  176 KRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVG---YDKKINIYDIRSQASTDRL---TY  249 (673)
T ss_pred             cceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEec---ccceEEEeeccccccccee---ee
Confidence            65 5667889999999999988887776643344589999999865 445444   6999999999965533332   23


Q ss_pred             CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCc
Q psy17682        348 SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKR  406 (490)
Q Consensus       348 ~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~  406 (490)
                      ..+...++|+++|.+| ++|...|.|..||++..+..+..+..+.  ..|++++|-|.-
T Consensus       250 ~~Plstvaf~~~G~~L-~aG~s~G~~i~YD~R~~k~Pv~v~sah~--~sVt~vafq~s~  305 (673)
T KOG4378|consen  250 SHPLSTVAFSECGTYL-CAGNSKGELIAYDMRSTKAPVAVRSAHD--ASVTRVAFQPSP  305 (673)
T ss_pred             cCCcceeeecCCceEE-EeecCCceEEEEecccCCCCceEeeecc--cceeEEEeeecc
Confidence            4578899999999999 7899999999999999876666665444  479999999874

>KOG0639|consensus

Probab=99.89  E-value=2e-22  Score=181.76  Aligned_cols=244  Identities=15%  Similarity=0.179  Sum_probs=193.9

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeec--ccccCEEEEEEeeCCCCEEEEEeCCCcE
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLL--YHQRRVGLVLWHPTAQNVLLTAGSDNNV  240 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~p~~~~~l~s~~~dg~v  240 (490)
                      .|..-|..+..+... ++++||+. |.|+|||+......    .|+..+.  .....|+++...|+|+ .|++|+.-.++
T Consensus       417 ~HGEvVcAvtIS~~t-rhVyTgGk-gcVKVWdis~pg~k----~PvsqLdcl~rdnyiRSckL~pdgr-tLivGGeastl  489 (705)
T KOG0639|consen  417 AHGEVVCAVTISNPT-RHVYTGGK-GCVKVWDISQPGNK----SPVSQLDCLNRDNYIRSCKLLPDGR-TLIVGGEASTL  489 (705)
T ss_pred             ccCcEEEEEEecCCc-ceeEecCC-CeEEEeeccCCCCC----CccccccccCcccceeeeEecCCCc-eEEecccccee
Confidence            687888888888766 78999885 68999998654221    2222222  2456899999999996 88999999999


Q ss_pred             EEEECCCCeeE--EEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEE
Q psy17682        241 AIWNVGTGEIM--IQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTT  318 (490)
Q Consensus       241 ~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~  318 (490)
                      .|||+....+.  ..+....-.+++++.+||.+..+++..||.|.|||+.+...++.+.+|... ..|+..+++|..|.+
T Consensus       490 siWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDG-ascIdis~dGtklWT  568 (705)
T KOG0639|consen  490 SIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG-ASCIDISKDGTKLWT  568 (705)
T ss_pred             eeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCC-ceeEEecCCCceeec
Confidence            99999866533  233333456788999999999999999999999999999999999999987 999999999999999


Q ss_pred             EeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCcee
Q psy17682        319 GFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQR  398 (490)
Q Consensus       319 ~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~  398 (490)
                      |+   -|.+|+.||++.+.++.   ..+..+.|.++.++|.+.+| +.|-.++.+.|-.....+.    .....+..-|.
T Consensus       569 GG---lDntvRcWDlregrqlq---qhdF~SQIfSLg~cP~~dWl-avGMens~vevlh~skp~k----yqlhlheScVL  637 (705)
T KOG0639|consen  569 GG---LDNTVRCWDLREGRQLQ---QHDFSSQIFSLGYCPTGDWL-AVGMENSNVEVLHTSKPEK----YQLHLHESCVL  637 (705)
T ss_pred             CC---Cccceeehhhhhhhhhh---hhhhhhhheecccCCCccce-eeecccCcEEEEecCCccc----eeecccccEEE
Confidence            98   79999999999877533   33455679999999999999 7899999888887776552    22334556899


Q ss_pred             eEEEeeCceeEEeecc--eeEEEEecCCC
Q psy17682        399 GIGMMPKRGCDVNSCE--IGRFFRLNNSG  425 (490)
Q Consensus       399 ~~~~sp~~~~l~~~~~--~~~~~~~~~~~  425 (490)
                      ++.|.+.|++.++.+.  .++.|+.--+.
T Consensus       638 SlKFa~cGkwfvStGkDnlLnawrtPyGa  666 (705)
T KOG0639|consen  638 SLKFAYCGKWFVSTGKDNLLNAWRTPYGA  666 (705)
T ss_pred             EEEecccCceeeecCchhhhhhccCcccc
Confidence            9999999999998855  44556654443

>KOG4328|consensus

Probab=99.89  E-value=7.7e-22  Score=176.22  Aligned_cols=260  Identities=14%  Similarity=0.148  Sum_probs=195.7

Q ss_pred             cceeecccCCeeEEEECCCCC-CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDD-NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS  236 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~  236 (490)
                      ....+-|.++|.+++|+|... +++++|..-|+|-+||+.+.+...   .....+..|..+|.++.|+|.+...+++.+.
T Consensus       179 ~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~---d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSy  255 (498)
T KOG4328|consen  179 LNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDK---DGVYLFTPHSGPVSGLKFSPANTSQIYSSSY  255 (498)
T ss_pred             cceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCcc---CceEEeccCCccccceEecCCChhheeeecc
Confidence            345667899999999999875 789999999999999996332211   2233456699999999999998889999999


Q ss_pred             CCcEEEEECCCCe--eEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-eeeeeecCCCceeEEEEeCC-
Q psy17682        237 DNNVAIWNVGTGE--IMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKS-  312 (490)
Q Consensus       237 dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~s~~-  312 (490)
                      ||+|++-|++...  .+..+......+..+.|+.+...++.+..=|...+||++++.. ...+..|.. .|+.++++|- 
T Consensus       256 DGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~k-KI~sv~~NP~~  334 (498)
T KOG4328|consen  256 DGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKK-KITSVALNPVC  334 (498)
T ss_pred             CceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhc-ccceeecCCCC
Confidence            9999999998664  3333333455678889998888888888878999999998765 444556666 5999999997 


Q ss_pred             CcEEEEEeCCCceeEEEEecCCCCCCCe--EEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEec----CCCCeeE
Q psy17682        313 GLIFTTGFSKMSERQYSLRAPDHLDEPI--VMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT----AEPPFVH  386 (490)
Q Consensus       313 ~~~l~~~~~~~~~~~i~iwd~~~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~----~~~~~~~  386 (490)
                      ..+|++++   .|++.+|||++......  .+....|...|.++.|||++-.| +|.+.|..|+|||..    ...+...
T Consensus       335 p~~laT~s---~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl-~TT~~D~~IRv~dss~~sa~~~p~~~  410 (498)
T KOG4328|consen  335 PWFLATAS---LDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTL-LTTCQDNEIRVFDSSCISAKDEPLGT  410 (498)
T ss_pred             chheeecc---cCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCce-EeeccCCceEEeecccccccCCccce
Confidence            56778887   79999999999765433  36667888999999999998887 788899999999994    3332222


Q ss_pred             EeeeeeCCCc--eeeEEEeeCceeEEeecc--eeEEEEecCCC
Q psy17682        387 YINTFQTPDP--QRGIGMMPKRGCDVNSCE--IGRFFRLNNSG  425 (490)
Q Consensus       387 ~~~~~~~~~~--i~~~~~sp~~~~l~~~~~--~~~~~~~~~~~  425 (490)
                      ......+...  .-..+|.|+..+++.+.-  .+-+++-..++
T Consensus       411 I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q  453 (498)
T KOG4328|consen  411 IPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQ  453 (498)
T ss_pred             eeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCE
Confidence            2222222223  345689999988888733  45556555544

>KOG0321|consensus

Probab=99.89  E-value=1.5e-21  Score=181.10  Aligned_cols=299  Identities=14%  Similarity=0.186  Sum_probs=206.8

Q ss_pred             EEecc--CCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceE
Q psy17682         50 VLWHP--TAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFK  127 (490)
Q Consensus        50 v~~~p--~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~  127 (490)
                      ..|++  ..+.+|+.+.+||.|.++|.+.-.+..+           +...      ..-..+...|..+.|-|.     .
T Consensus        55 ~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~e-----------e~~l------k~~~aH~nAifDl~wapg-----e  112 (720)
T KOG0321|consen   55 DSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLE-----------ERQL------KKPLAHKNAIFDLKWAPG-----E  112 (720)
T ss_pred             ccccCCCCccceEEEecCCCceeeecchhhhcchh-----------hhhh------cccccccceeEeeccCCC-----c
Confidence            55654  3447899999999999999886543210           0000      111223345777888774     4


Q ss_pred             EEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCc--c----
Q psy17682        128 EEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGI--S----  201 (490)
Q Consensus       128 ~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~--~----  201 (490)
                      ..++++.+|.+++.|++.......      ...+.||.+.|.+++|.|.+...|++|+.||.|.|||++-...  .    
T Consensus       113 ~~lVsasGDsT~r~Wdvk~s~l~G------~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~  186 (720)
T KOG0321|consen  113 SLLVSASGDSTIRPWDVKTSRLVG------GRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFD  186 (720)
T ss_pred             eeEEEccCCceeeeeeeccceeec------ceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHh
Confidence            578889999999999996222211      2246799999999999999999999999999999999864331  0    


Q ss_pred             --------------cccccceeeecccccCEEE---EEEeeCCCCEEEEEeC-CCcEEEEECCCCeeEEEE--------e
Q psy17682        202 --------------RTLTEPVVDLLYHQRRVGL---VLWHPTAQNVLLTAGS-DNNVAIWNVGTGEIMIQI--------E  255 (490)
Q Consensus       202 --------------~~~~~~~~~~~~~~~~v~~---~~~~p~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~--------~  255 (490)
                                    .....-.....++...|.+   +.+..|. +.||+++. |+.|+|||++........        .
T Consensus       187 ~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe-~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~  265 (720)
T KOG0321|consen  187 NRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDE-STLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYP  265 (720)
T ss_pred             hhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEecc-ceeeeccCCCcceEEEeecccccccccCCCcccCcc
Confidence                          0000111122334444544   5555565 47888887 999999999875433221        1


Q ss_pred             cC---CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eeeeeeecCCC-ceeEEEEeCCCcEEEEEeCCCceeEEE
Q psy17682        256 CH---PDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGA--IEEEAVCHEGS-KATRAIYLKSGLIFTTGFSKMSERQYS  329 (490)
Q Consensus       256 ~~---~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~-~~~~~~~s~~~~~l~~~~~~~~~~~i~  329 (490)
                      .|   ...+.++.....|.+|++.+.|+.|++|++.+..  ++..+.++... ....-..+|++.++++|+   .+...+
T Consensus       266 t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgS---sd~~ay  342 (720)
T KOG0321|consen  266 THSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGS---SDEQAY  342 (720)
T ss_pred             CcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccC---CCccee
Confidence            22   3357788888888998888889999999998653  34444443322 123345789999999999   799999


Q ss_pred             EecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        330 LRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       330 iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      +|.+.+.+.+.... .+|...|+.++|.|...-=+++++.|..+++|++..+
T Consensus       343 iw~vs~~e~~~~~l-~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~  393 (720)
T KOG0321|consen  343 IWVVSSPEAPPALL-LGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNG  393 (720)
T ss_pred             eeeecCccCChhhh-hCcceEEEEEeeccccCCCceeeccCcceEEEeccCc
Confidence            99999877655443 4677889999998854332356799999999999654

>KOG2919|consensus

Probab=99.89  E-value=3.9e-21  Score=164.48  Aligned_cols=298  Identities=15%  Similarity=0.179  Sum_probs=205.5

Q ss_pred             eeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccc--ccc
Q psy17682         48 GLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDY--VKE  125 (490)
Q Consensus        48 ~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~~  125 (490)
                      ..+.|+|+| ..|++-+.|..+.+|++-..........  ........  ......      ...|...+|-+..  .+.
T Consensus        53 kgckWSPDG-SciL~~sedn~l~~~nlP~dlys~~~~~--~~~~~~~~--~~r~~e------g~tvydy~wYs~M~s~qP  121 (406)
T KOG2919|consen   53 KGCKWSPDG-SCILSLSEDNCLNCWNLPFDLYSKKADG--PLNFSKHL--SYRYQE------GETVYDYCWYSRMKSDQP  121 (406)
T ss_pred             ccceeCCCC-ceEEeecccCeeeEEecChhhcccCCCC--ccccccce--eEEecc------CCEEEEEEeeeccccCCC
Confidence            346899999 8999999999999999864322111000  00000000  000000      1133344442211  122


Q ss_pred             eEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccC---CeeEEEECCCCCCEEEEEeCCCcEEEEEC-CCCCcc
Q psy17682        126 FKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKG---PVLDIAWSPHDDNVIASGSEDCVVKVWQI-PDGGIS  201 (490)
Q Consensus       126 ~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~---~V~~~~~~p~~~~~l~s~~~dg~i~iwd~-~~~~~~  201 (490)
                      -..+.++...+.-|.+|+.     .++++...++.+ .|.+   ...+++|+||| ..|+.|. ...|+++|+ +.|..-
T Consensus       122 ~t~l~a~ssr~~PIh~wda-----ftG~lraSy~~y-dh~de~taAhsL~Fs~DG-eqlfaGy-krcirvFdt~RpGr~c  193 (406)
T KOG2919|consen  122 STNLFAVSSRDQPIHLWDA-----FTGKLRASYRAY-DHQDEYTAAHSLQFSPDG-EQLFAGY-KRCIRVFDTSRPGRDC  193 (406)
T ss_pred             ccceeeeccccCceeeeec-----cccccccchhhh-hhHHhhhhheeEEecCCC-CeEeecc-cceEEEeeccCCCCCC
Confidence            2457788899999999998     566666555554 3444   34689999999 6777765 569999999 555443


Q ss_pred             cccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC-CC
Q psy17682        202 RTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK-DK  280 (490)
Q Consensus       202 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg  280 (490)
                      ..+......-.+..+-+.+++|+|.....++.|+....+-||.-..+.++..+-+|.+.|+.++|.++|+.|++|+. |.
T Consensus       194 ~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~d  273 (406)
T KOG2919|consen  194 PVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDD  273 (406)
T ss_pred             cchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCC
Confidence            33222111122346778999999998779999999999999998889999999999999999999999999999985 77


Q ss_pred             eEEEEeCCCC-ceeeeeeecCCCceeEEEE--eCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeec
Q psy17682        281 KMRIINPRTG-AIEEEAVCHEGSKATRAIY--LKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYD  357 (490)
Q Consensus       281 ~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~--s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s  357 (490)
                      .|..||+|.. .++..+..|.+..-..+.|  .|++++|++|+   .+|.|++||++....+... ...+...++.++++
T Consensus       274 kIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~---tdG~V~vwdlk~~gn~~sv-~~~~sd~vNgvsln  349 (406)
T KOG2919|consen  274 KILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGD---TDGSVRVWDLKDLGNEVSV-TGNYSDTVNGVSLN  349 (406)
T ss_pred             eEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccC---CCccEEEEecCCCCCcccc-cccccccccceecC
Confidence            8999999964 4666666665532444555  57799999997   7999999999985443222 22455678999999


Q ss_pred             CCCCeEEEEecC
Q psy17682        358 PDTNLVYLCGKG  369 (490)
Q Consensus       358 ~~~~~l~~~g~~  369 (490)
                      |--..+ ++++.
T Consensus       350 P~mpil-atssG  360 (406)
T KOG2919|consen  350 PIMPIL-ATSSG  360 (406)
T ss_pred             ccccee-eeccC
Confidence            997776 66543

>KOG1274|consensus

Probab=99.89  E-value=9.6e-21  Score=182.93  Aligned_cols=245  Identities=12%  Similarity=0.126  Sum_probs=197.0

Q ss_pred             ecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC-CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcE
Q psy17682        162 GGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG-GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNV  240 (490)
Q Consensus       162 ~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v  240 (490)
                      .+|+..-+.++|.|+| .+|++++.||.|++|+.... +....+.       .+...|.+++...   +.|++|+.+++|
T Consensus        10 yaht~G~t~i~~d~~g-efi~tcgsdg~ir~~~~~sd~e~P~ti~-------~~g~~v~~ia~~s---~~f~~~s~~~tv   78 (933)
T KOG1274|consen   10 YAHTGGLTLICYDPDG-EFICTCGSDGDIRKWKTNSDEEEPETID-------ISGELVSSIACYS---NHFLTGSEQNTV   78 (933)
T ss_pred             hhccCceEEEEEcCCC-CEEEEecCCCceEEeecCCcccCCchhh-------ccCceeEEEeecc---cceEEeeccceE
Confidence            4799999999999999 79999999999999997655 2222221       2667777776553   479999999999


Q ss_pred             EEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEe
Q psy17682        241 AIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       241 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~  320 (490)
                      .+|.+.+++.-..+....-++.+++++-+|++++.|+.|-.|++.++.+......+.+|... +.++.|+|++.+||+.+
T Consensus        79 ~~y~fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~ap-Vl~l~~~p~~~fLAvss  157 (933)
T KOG1274|consen   79 LRYKFPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAP-VLQLSYDPKGNFLAVSS  157 (933)
T ss_pred             EEeeCCCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCc-eeeeeEcCCCCEEEEEe
Confidence            99999988765555556778999999999999999999999999999999999999999886 99999999999999998


Q ss_pred             CCCceeEEEEecCCCCCCCeEEEecc------CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC
Q psy17682        321 SKMSERQYSLRAPDHLDEPIVMVELD------TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP  394 (490)
Q Consensus       321 ~~~~~~~i~iwd~~~~~~~~~~~~~~------~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~  394 (490)
                         .+|.|++||+.++..........      ....+..++|+|+|..+ +.-+.|+.|++|+..+..........+. .
T Consensus       158 ---~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~l-a~~~~d~~Vkvy~r~~we~~f~Lr~~~~-s  232 (933)
T KOG1274|consen  158 ---CDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTL-AVPPVDNTVKVYSRKGWELQFKLRDKLS-S  232 (933)
T ss_pred             ---cCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeE-EeeccCCeEEEEccCCceeheeeccccc-c
Confidence               79999999999876544333222      13446789999997777 4556799999999999875443333222 2


Q ss_pred             CceeeEEEeeCceeEEee--cceeEEEEecC
Q psy17682        395 DPQRGIGMMPKRGCDVNS--CEIGRFFRLNN  423 (490)
Q Consensus       395 ~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~  423 (490)
                      ..+..++|+|+|.+++++  .+.+-+|++++
T Consensus       233 s~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t  263 (933)
T KOG1274|consen  233 SKFSDLQWSPNGKYIAASTLDGQILVWNVDT  263 (933)
T ss_pred             cceEEEEEcCCCcEEeeeccCCcEEEEeccc
Confidence            348999999999999998  55778999884

>KOG2445|consensus

Probab=99.88  E-value=1.4e-19  Score=154.07  Aligned_cols=257  Identities=14%  Similarity=0.159  Sum_probs=186.4

Q ss_pred             ecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEee-C-CCCEEEEEeCCCc
Q psy17682        162 GGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP-T-AQNVLLTAGSDNN  239 (490)
Q Consensus       162 ~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~-~~~~l~s~~~dg~  239 (490)
                      .+|.+-|.++.|.+.| +++|+|+.|++|+|||.+........   ....+.|.+.|..+.|.+ . | ..+|+++.|++
T Consensus        10 s~h~DlihdVs~D~~G-RRmAtCSsDq~vkI~d~~~~s~~W~~---Ts~Wrah~~Si~rV~WAhPEfG-qvvA~cS~Drt   84 (361)
T KOG2445|consen   10 SGHKDLIHDVSFDFYG-RRMATCSSDQTVKIWDSTSDSGTWSC---TSSWRAHDGSIWRVVWAHPEFG-QVVATCSYDRT   84 (361)
T ss_pred             cCCcceeeeeeecccC-ceeeeccCCCcEEEEeccCCCCceEE---eeeEEecCCcEEEEEecCcccc-ceEEEEecCCc
Confidence            5899999999999998 89999999999999997554433322   234667999999999954 4 5 49999999999


Q ss_pred             EEEEECCC---------CeeEEEEecCCCcEEEEEEcC--CCCEEEEEeCCCeEEEEeCCCCc------eeeeee-----
Q psy17682        240 VAIWNVGT---------GEIMIQIECHPDIVYSASWNW--DGSKLLTTCKDKKMRIINPRTGA------IEEEAV-----  297 (490)
Q Consensus       240 v~iwd~~~---------~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~------~~~~~~-----  297 (490)
                      +.||.-..         -....++....+.|+.+.|.|  -|-.+++++.||.+|||+.-..-      +...+.     
T Consensus        85 v~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~p  164 (361)
T KOG2445|consen   85 VSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDP  164 (361)
T ss_pred             eeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCC
Confidence            99997521         123455667788999999999  56789999999999999876432      222222     


Q ss_pred             -ecCCCceeEEEEeCC---CcEEEEEeCCC--ceeEEEEecCCCCCCC-eEE-EeccCCCceeeeeecCCC---CeEEEE
Q psy17682        298 -CHEGSKATRAIYLKS---GLIFTTGFSKM--SERQYSLRAPDHLDEP-IVM-VELDTSNGVMFPLYDPDT---NLVYLC  366 (490)
Q Consensus       298 -~~~~~~~~~~~~s~~---~~~l~~~~~~~--~~~~i~iwd~~~~~~~-~~~-~~~~~~~~i~~~~~s~~~---~~l~~~  366 (490)
                       +.......|+.|+|.   ..+|++|+++.  .-+.+.||........ ... ...++...|..++|.|+-   -+++|+
T Consensus       165 p~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAv  244 (361)
T KOG2445|consen  165 PGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAV  244 (361)
T ss_pred             cccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEE
Confidence             122234788889876   56889887431  1247888877654421 122 223677889999999963   245689


Q ss_pred             ecCCCeEEEEEecCCC----------------CeeEEeeeee-CCCceeeEEEeeCceeEEee--cceeEEEEecCC
Q psy17682        367 GKGDSVIRYFEITAEP----------------PFVHYINTFQ-TPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNS  424 (490)
Q Consensus       367 g~~dg~i~iwd~~~~~----------------~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~  424 (490)
                      ++.|| |+||.+....                -.++.+..+. |.+.|..+.|+--|..|.++  ++.+|+|+..-.
T Consensus       245 A~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~  320 (361)
T KOG2445|consen  245 ATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYN  320 (361)
T ss_pred             eecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhh
Confidence            99999 9999998311                1123444444 44689999999999998887  448899986543

>KOG0303|consensus

Probab=99.88  E-value=1.3e-20  Score=165.50  Aligned_cols=262  Identities=19%  Similarity=0.256  Sum_probs=190.7

Q ss_pred             ecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC-------eeEEEEecCCCcEEEEEEcCC-CCEEEEEeCCCeE
Q psy17682        211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG-------EIMIQIECHPDIVYSASWNWD-GSKLLTTCKDKKM  282 (490)
Q Consensus       211 ~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i  282 (490)
                      ..+|.++|..++|+|.+++.+|+|+.|.+|.||.+-.+       +++..+.+|...|--++|+|. .+.|++++.|.+|
T Consensus        77 v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v  156 (472)
T KOG0303|consen   77 VCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTV  156 (472)
T ss_pred             ccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceE
Confidence            67899999999999999999999999999999998643       467888999999999999995 4789999999999


Q ss_pred             EEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCC-ceeeeeecCCCC
Q psy17682        283 RIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSN-GVMFPLYDPDTN  361 (490)
Q Consensus       283 ~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~-~i~~~~~s~~~~  361 (490)
                      .+|++.+++.+.++. |... +.++.|+.+|.+|++.+   .|..|+|||.++++....-  ..|.+ .-..+.|-.+|.
T Consensus       157 ~iWnv~tgeali~l~-hpd~-i~S~sfn~dGs~l~Ttc---kDKkvRv~dpr~~~~v~e~--~~heG~k~~Raifl~~g~  229 (472)
T KOG0303|consen  157 SIWNVGTGEALITLD-HPDM-VYSMSFNRDGSLLCTTC---KDKKVRVIDPRRGTVVSEG--VAHEGAKPARAIFLASGK  229 (472)
T ss_pred             EEEeccCCceeeecC-CCCe-EEEEEeccCCceeeeec---ccceeEEEcCCCCcEeeec--ccccCCCcceeEEeccCc
Confidence            999999999888877 7664 99999999999999998   7999999999987632221  23322 345667888888


Q ss_pred             eEEEEe---cCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEE-ee--cceeEEEEecCCCce----EEEE
Q psy17682        362 LVYLCG---KGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDV-NS--CEIGRFFRLNNSGLC----QVVS  431 (490)
Q Consensus       362 ~l~~~g---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~--~~~~~~~~~~~~~~~----~~i~  431 (490)
                       ++.+|   ..+..+-+||..+-+.. -.+..+.....|.---+.||..++. +|  ++.+|.|.+.+....    ...+
T Consensus       230 -i~tTGfsr~seRq~aLwdp~nl~eP-~~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~~hyln~f~  307 (472)
T KOG0303|consen  230 -IFTTGFSRMSERQIALWDPNNLEEP-IALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPFVHYLNTFS  307 (472)
T ss_pred             -eeeeccccccccceeccCcccccCc-ceeEEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCCceeEEecccc
Confidence             44666   35779999998875433 2444555666677667788876543 22  568899998876511    0011


Q ss_pred             EEEeCCCcCcccCCCCCCCCCCCccchh--------------------hhcCCCCCCCcccCCCCcCCccccccccccC
Q psy17682        432 MTVPRKSELFQDDLYPDTVGDTAALTAD--------------------EWFAGNELFQDDLYPDTVGDTAALTADEWFA  490 (490)
Q Consensus       432 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (490)
                      -.-|-+---|+         +++.++..                    -.-...+-++.+|||++.+.-+|+|+.|||.
T Consensus       308 S~epQRG~g~m---------PKRGl~Vs~cEI~rfyKl~~~~~epIsm~VPRkSdlFQeDlYPdt~~~~paLtAEEW~s  377 (472)
T KOG0303|consen  308 SKEPQRGMGFM---------PKRGLDVSKCEIARFYKLHERKCEPISMTVPRKSDLFQEDLYPDTPGPEPALTAEEWLS  377 (472)
T ss_pred             cCCcccccccc---------ccccccchHHHHHHHHHhhcceeeeEEEeccccchhhhhccCCCCCCCCccccHHHhhc
Confidence            00011100011         11111111                    0123445567899999999999999999983

>KOG1273|consensus

Probab=99.88  E-value=9.9e-21  Score=161.46  Aligned_cols=244  Identities=16%  Similarity=0.203  Sum_probs=179.0

Q ss_pred             eeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC
Q psy17682        168 VLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT  247 (490)
Q Consensus       168 V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~  247 (490)
                      ..|+.|++.| .+||+|+.||.|.|||+.+....+.       +.+|..+|.+++|+++|+ .|++++.|..|.+||+..
T Consensus        26 a~~~~Fs~~G-~~lAvGc~nG~vvI~D~~T~~iar~-------lsaH~~pi~sl~WS~dgr-~LltsS~D~si~lwDl~~   96 (405)
T KOG1273|consen   26 AECCQFSRWG-DYLAVGCANGRVVIYDFDTFRIARM-------LSAHVRPITSLCWSRDGR-KLLTSSRDWSIKLWDLLK   96 (405)
T ss_pred             cceEEeccCc-ceeeeeccCCcEEEEEccccchhhh-------hhccccceeEEEecCCCC-EeeeecCCceeEEEeccC
Confidence            7899999998 8999999999999999988765444       556999999999999995 999999999999999999


Q ss_pred             CeeEEEEecCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeeeee-----ecCCCceeEEEEeCCCcEEEEEeC
Q psy17682        248 GEIMIQIECHPDIVYSASWNWDG-SKLLTTCKDKKMRIINPRTGAIEEEAV-----CHEGSKATRAIYLKSGLIFTTGFS  321 (490)
Q Consensus       248 ~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~~~~~~~~~~~~s~~~~~l~~~~~  321 (490)
                      |.+++.+. ...+|+...|+|.. +..++.-.+..-.+-++..+.  ....     +..+....+..|.+.|+++.+|. 
T Consensus        97 gs~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~--h~~Lp~d~d~dln~sas~~~fdr~g~yIitGt-  172 (405)
T KOG1273|consen   97 GSPLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPK--HSVLPKDDDGDLNSSASHGVFDRRGKYIITGT-  172 (405)
T ss_pred             CCceeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCc--eeeccCCCccccccccccccccCCCCEEEEec-
Confidence            99999988 68899999999944 444444445555555555422  2211     11122234446889999999998 


Q ss_pred             CCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe-----eEEeeee---eC
Q psy17682        322 KMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF-----VHYINTF---QT  393 (490)
Q Consensus       322 ~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~-----~~~~~~~---~~  393 (490)
                        ..|.+.++|..+.++...... .....|.++.++..|+++ +..+.|..||.|++..-...     .+....+   -.
T Consensus       173 --sKGkllv~~a~t~e~vas~ri-ts~~~IK~I~~s~~g~~l-iiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVN  248 (405)
T KOG1273|consen  173 --SKGKLLVYDAETLECVASFRI-TSVQAIKQIIVSRKGRFL-IINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVN  248 (405)
T ss_pred             --CcceEEEEecchheeeeeeee-chheeeeEEEEeccCcEE-EEecCCceEEEEehhhhcccCccCCcChhHHHHHHHh
Confidence              688999999998765444332 224568899999999998 77889999999998731100     0000111   11


Q ss_pred             CCceeeEEEeeCceeEEeecc---eeEEEEecCCCceE
Q psy17682        394 PDPQRGIGMMPKRGCDVNSCE---IGRFFRLNNSGLCQ  428 (490)
Q Consensus       394 ~~~i~~~~~sp~~~~l~~~~~---~~~~~~~~~~~~~~  428 (490)
                      .-.=.+++||.+|.++++++.   .+.+|.-..+.++.
T Consensus       249 k~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVK  286 (405)
T KOG1273|consen  249 KLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVK  286 (405)
T ss_pred             hhhhhheeecCCccEEEeccccceeEEEEecCCcceee
Confidence            123367899999999888754   45666666666433

>KOG0646|consensus

Probab=99.88  E-value=4.4e-21  Score=171.95  Aligned_cols=234  Identities=15%  Similarity=0.149  Sum_probs=184.9

Q ss_pred             cceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccc
Q psy17682         44 QRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYV  123 (490)
Q Consensus        44 ~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  123 (490)
                      .++|.|+.-+|.| .+|+.|+..|.+.+|.+.+|.+                                            
T Consensus        81 Pg~v~al~s~n~G-~~l~ag~i~g~lYlWelssG~L--------------------------------------------  115 (476)
T KOG0646|consen   81 PGPVHALASSNLG-YFLLAGTISGNLYLWELSSGIL--------------------------------------------  115 (476)
T ss_pred             ccceeeeecCCCc-eEEEeecccCcEEEEEeccccH--------------------------------------------
Confidence            3568888888888 7777776788888888887652                                            


Q ss_pred             cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCc-c-
Q psy17682        124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGI-S-  201 (490)
Q Consensus       124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~-  201 (490)
                                                        +.++.+|-..|+|+.|+-|| .+|+||+.||.|.+|.+.+--. . 
T Consensus       116 ----------------------------------L~v~~aHYQ~ITcL~fs~dg-s~iiTgskDg~V~vW~l~~lv~a~~  160 (476)
T KOG0646|consen  116 ----------------------------------LNVLSAHYQSITCLKFSDDG-SHIITGSKDGAVLVWLLTDLVSADN  160 (476)
T ss_pred             ----------------------------------HHHHHhhccceeEEEEeCCC-cEEEecCCCccEEEEEEEeeccccc
Confidence                                              12456899999999999988 8999999999999998742110 0 


Q ss_pred             cccccceeeecccccCEEEEEEeeCC-CCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCC
Q psy17682        202 RTLTEPVVDLLYHQRRVGLVLWHPTA-QNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK  280 (490)
Q Consensus       202 ~~~~~~~~~~~~~~~~v~~~~~~p~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  280 (490)
                      .....|...+..|.-+|+++...+.+ ..++++++.|.++++||+..+..+.++. ....+.+++.+|-++.+.+|+.+|
T Consensus       161 ~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~-fp~si~av~lDpae~~~yiGt~~G  239 (476)
T KOG0646|consen  161 DHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT-FPSSIKAVALDPAERVVYIGTEEG  239 (476)
T ss_pred             CCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe-cCCcceeEEEcccccEEEecCCcc
Confidence            01336677788899999999998763 2389999999999999999999888887 678899999999999999999999


Q ss_pred             eEEEEeCCCCc----------------eeeeeeecCC-CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEE
Q psy17682        281 KMRIINPRTGA----------------IEEEAVCHEG-SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMV  343 (490)
Q Consensus       281 ~i~iwd~~~~~----------------~~~~~~~~~~-~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~  343 (490)
                      .|.+.++....                ....+.+|.+ ..|+|++.+-||.+|++|+   .||.++|||+.+.++...+.
T Consensus       240 ~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd---~dg~VcvWdi~S~Q~iRtl~  316 (476)
T KOG0646|consen  240 KIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGD---EDGKVCVWDIYSKQCIRTLQ  316 (476)
T ss_pred             eEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeC---CCCCEEEEecchHHHHHHHh
Confidence            99998875432                3344557766 4599999999999999998   79999999999877554443


Q ss_pred             eccCCCceeeeeecCCCCeE
Q psy17682        344 ELDTSNGVMFPLYDPDTNLV  363 (490)
Q Consensus       344 ~~~~~~~i~~~~~s~~~~~l  363 (490)
                      .  ..+.|+.+.+.|-.+-.
T Consensus       317 ~--~kgpVtnL~i~~~~~~~  334 (476)
T KOG0646|consen  317 T--SKGPVTNLQINPLERGI  334 (476)
T ss_pred             h--hccccceeEeeccccce
Confidence            2  34668888876654443

>KOG2919|consensus

Probab=99.88  E-value=2.3e-20  Score=159.78  Aligned_cols=293  Identities=16%  Similarity=0.199  Sum_probs=210.6

Q ss_pred             cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcc---cC-CCCcceee-cccCCeeEEEEC-------CCCCC
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTG---RI-NADHALVG-GHKGPVLDIAWS-------PHDDN  179 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~---~~-~~~~~~~~-~h~~~V~~~~~~-------p~~~~  179 (490)
                      ......||||+     .++.+...+..+.+|++...-...+   .. ......++ .....|...+|-       |+. +
T Consensus        51 f~kgckWSPDG-----SciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t-~  124 (406)
T KOG2919|consen   51 FLKGCKWSPDG-----SCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPST-N  124 (406)
T ss_pred             hhccceeCCCC-----ceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCcc-c
Confidence            44567899997     5788889999999999874322222   11 11111121 224567787875       555 7


Q ss_pred             EEEEEeCCCcEEEEECCCCCcccccccceeeeccccc---CEEEEEEeeCCCCEEEEEeCCCcEEEEEC-CCCeeE--E-
Q psy17682        180 VIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQR---RVGLVLWHPTAQNVLLTAGSDNNVAIWNV-GTGEIM--I-  252 (490)
Q Consensus       180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~p~~~~~l~s~~~dg~v~iwd~-~~~~~~--~-  252 (490)
                      ++++.+.|.-|++||.-+|+....+.     ...|..   ...+++|+|||+ .|++| ....|++||+ +.|.-.  . 
T Consensus       125 l~a~ssr~~PIh~wdaftG~lraSy~-----~ydh~de~taAhsL~Fs~DGe-qlfaG-ykrcirvFdt~RpGr~c~vy~  197 (406)
T KOG2919|consen  125 LFAVSSRDQPIHLWDAFTGKLRASYR-----AYDHQDEYTAAHSLQFSPDGE-QLFAG-YKRCIRVFDTSRPGRDCPVYT  197 (406)
T ss_pred             eeeeccccCceeeeeccccccccchh-----hhhhHHhhhhheeEEecCCCC-eEeec-ccceEEEeeccCCCCCCcchh
Confidence            99999999999999999998766543     222443   346899999997 66665 5689999999 444321  1 


Q ss_pred             EE----ecCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeE
Q psy17682        253 QI----ECHPDIVYSASWNW-DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQ  327 (490)
Q Consensus       253 ~~----~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~  327 (490)
                      ++    .+..+.+.+++|+| +...++.++...++-||.-..+.++..+.+|.+. |+.+.|.++|+.|.+|..  .+..
T Consensus       198 t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gG-vThL~~~edGn~lfsGaR--k~dk  274 (406)
T KOG2919|consen  198 TVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGG-VTHLQWCEDGNKLFSGAR--KDDK  274 (406)
T ss_pred             hhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCC-eeeEEeccCcCeeccccc--CCCe
Confidence            11    13467789999999 5569999999999999988888999999899887 999999999999999985  5788


Q ss_pred             EEEecCCCCCCCeEEEeccCC--CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeC
Q psy17682        328 YSLRAPDHLDEPIVMVELDTS--NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPK  405 (490)
Q Consensus       328 i~iwd~~~~~~~~~~~~~~~~--~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~  405 (490)
                      |-.||++....++.....+..  +.-.-....|++++| ++|+.||.|++||+......  ......+...+++++++|-
T Consensus       275 Il~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~L-asG~tdG~V~vwdlk~~gn~--~sv~~~~sd~vNgvslnP~  351 (406)
T KOG2919|consen  275 ILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEIL-ASGDTDGSVRVWDLKDLGNE--VSVTGNYSDTVNGVSLNPI  351 (406)
T ss_pred             EEEEeehhccchhhhhhhhccCccceEEEecCCCCcee-eccCCCccEEEEecCCCCCc--ccccccccccccceecCcc
Confidence            999999986655433222221  222334557899999 89999999999999983211  1111234467999999999


Q ss_pred             ceeEEeecceeEEEEecCC
Q psy17682        406 RGCDVNSCEIGRFFRLNNS  424 (490)
Q Consensus       406 ~~~l~~~~~~~~~~~~~~~  424 (490)
                      -.+++++++. |+|...+.
T Consensus       352 mpilatssGq-r~f~~~~d  369 (406)
T KOG2919|consen  352 MPILATSSGQ-RIFKYPKD  369 (406)
T ss_pred             cceeeeccCc-eeecCCCc
Confidence            8888888877 66665443

>KOG0307|consensus

Probab=99.87  E-value=9.5e-22  Score=194.39  Aligned_cols=252  Identities=13%  Similarity=0.168  Sum_probs=196.7

Q ss_pred             cCCeeEEEECCCCCC---EEEEEeCCCcEEEEECCC---CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC
Q psy17682        165 KGPVLDIAWSPHDDN---VIASGSEDCVVKVWQIPD---GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN  238 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~---~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg  238 (490)
                      ...-+.++|.+.|..   +++.|.+||.|.+||...   +.....    +.....|.+.|..+.|++...++|++|+.||
T Consensus        64 ~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~----la~~~~h~G~V~gLDfN~~q~nlLASGa~~g  139 (1049)
T KOG0307|consen   64 SNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEV----LATKSKHTGPVLGLDFNPFQGNLLASGADDG  139 (1049)
T ss_pred             cccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHH----HhhhcccCCceeeeeccccCCceeeccCCCC
Confidence            456788999987744   599999999999999765   222221    2234559999999999999988999999999


Q ss_pred             cEEEEECCCCeeEEEEe--cCCCcEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeeeeecCC-CceeEEEEeCCC-
Q psy17682        239 NVAIWNVGTGEIMIQIE--CHPDIVYSASWNWD-GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEG-SKATRAIYLKSG-  313 (490)
Q Consensus       239 ~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~s~~~-  313 (490)
                      .|.|||+.+.+.-....  ...+.|.+++|+.. ...|++++.+|.+.|||+|..+++-.+..+.+ ..+..+.|+|++ 
T Consensus       140 eI~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~a  219 (1049)
T KOG0307|consen  140 EILIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHA  219 (1049)
T ss_pred             cEEEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCc
Confidence            99999998765443331  24678999999974 45788888999999999999988777765544 347889999994 


Q ss_pred             cEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-
Q psy17682        314 LIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-  392 (490)
Q Consensus       314 ~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-  392 (490)
                      ..+++++++...-.|.+||++....+.... ..|..+|.++.|++.+..++++++.|+.|.+|+.++++    .+..+. 
T Consensus       220 Tql~~As~dd~~PviqlWDlR~assP~k~~-~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgE----vl~~~p~  294 (1049)
T KOG0307|consen  220 TQLLVASGDDSAPVIQLWDLRFASSPLKIL-EGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGE----VLGELPA  294 (1049)
T ss_pred             eeeeeecCCCCCceeEeecccccCCchhhh-cccccceeeeccCCCCchhhhcccCCCCeeEecCCCce----EeeecCC
Confidence            456666666678899999999877766655 37788999999999886666899999999999999987    444444 


Q ss_pred             CCCceeeEEEeeCceeEEe---ecceeEEEEecCCC
Q psy17682        393 TPDPQRGIGMMPKRGCDVN---SCEIGRFFRLNNSG  425 (490)
Q Consensus       393 ~~~~i~~~~~sp~~~~l~~---~~~~~~~~~~~~~~  425 (490)
                      .+..+..+.|+|...-+++   -++.+.+|.+....
T Consensus       295 ~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  295 QGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             CCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence            4468999999998763332   26788889887755

>KOG1524|consensus

Probab=99.87  E-value=4.4e-20  Score=168.09  Aligned_cols=275  Identities=14%  Similarity=0.233  Sum_probs=192.5

Q ss_pred             ccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecc
Q psy17682         41 LYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISE  120 (490)
Q Consensus        41 ~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  120 (490)
                      ..|...|.|+.|+.+. ..+.+++++..++-|++.+........+.         ..+...-+.++.+.           
T Consensus        11 ~r~~e~vc~v~w~~~e-ei~~~~dDh~~~~~~~~~~~s~~~~~~p~---------df~pt~~h~~~rs~-----------   69 (737)
T KOG1524|consen   11 NRNSEKVCCVDWSSNE-EIYFVSDDHQIFKWSDVSRDSVEVAKLPD---------DFVPTDMHLGGRSS-----------   69 (737)
T ss_pred             cccceeEEeecccccc-eEEEeccCceEEEeecccchhhhhhhCCc---------ccCCcccccccccc-----------
Confidence            3688888999999887 66666666666666666554311100000         00000000000000           


Q ss_pred             ccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCc
Q psy17682        121 DYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGI  200 (490)
Q Consensus       121 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~  200 (490)
                       ..+.-...++..++||.+.+.+-.      ++.   .+.+..|.+.|.|-.|+|+| .-|+++++||.|++|. ++|-.
T Consensus        70 -~~g~~~d~~~i~s~DGkf~il~k~------~rV---E~sv~AH~~A~~~gRW~~dG-tgLlt~GEDG~iKiWS-rsGML  137 (737)
T KOG1524|consen   70 -GGGKGSDTLLICSNDGRFVILNKS------ARV---ERSISAHAAAISSGRWSPDG-AGLLTAGEDGVIKIWS-RSGML  137 (737)
T ss_pred             -CCCCCcceEEEEcCCceEEEeccc------chh---hhhhhhhhhhhhhcccCCCC-ceeeeecCCceEEEEe-ccchH
Confidence             001223456667889999998743      332   33567899999999999999 8999999999999999 55544


Q ss_pred             ccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCC
Q psy17682        201 SRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK  280 (490)
Q Consensus       201 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  280 (490)
                      ...+.       ....+|+|++|.|+..+++++.+  +.+.|=.+.....+...+.|.+-|.++.|++..+.+++|+.|-
T Consensus       138 RStl~-------Q~~~~v~c~~W~p~S~~vl~c~g--~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~  208 (737)
T KOG1524|consen  138 RSTVV-------QNEESIRCARWAPNSNSIVFCQG--GHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDF  208 (737)
T ss_pred             HHHHh-------hcCceeEEEEECCCCCceEEecC--CeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCce
Confidence            33322       26778999999999877776654  5566666666666677889999999999999999999999999


Q ss_pred             eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCC
Q psy17682        281 KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDT  360 (490)
Q Consensus       281 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~  360 (490)
                      ..++||.. |..+.+-..|.. ++++++|.|+ ..++.++    -+++++             +....+.|..++||+||
T Consensus       209 kfKvWD~~-G~~Lf~S~~~ey-~ITSva~npd-~~~~v~S----~nt~R~-------------~~p~~GSifnlsWS~DG  268 (737)
T KOG1524|consen  209 RFKIWDAQ-GANLFTSAAEEY-AITSVAFNPE-KDYLLWS----YNTARF-------------SSPRVGSIFNLSWSADG  268 (737)
T ss_pred             eEEeeccc-CcccccCChhcc-ceeeeeeccc-cceeeee----eeeeee-------------cCCCccceEEEEEcCCC
Confidence            99999966 555655556655 4999999999 7777775    455552             11234679999999999


Q ss_pred             CeEEEEecCCCeEEEEEe
Q psy17682        361 NLVYLCGKGDSVIRYFEI  378 (490)
Q Consensus       361 ~~l~~~g~~dg~i~iwd~  378 (490)
                      ..+ ++|+..|.+.+-.+
T Consensus       269 TQ~-a~gt~~G~v~~A~~  285 (737)
T KOG1524|consen  269 TQA-TCGTSTGQLIVAYA  285 (737)
T ss_pred             cee-eccccCceEEEeee
Confidence            998 78888887765444

>KOG2055|consensus

Probab=99.86  E-value=1.2e-19  Score=162.43  Aligned_cols=262  Identities=13%  Similarity=0.165  Sum_probs=198.1

Q ss_pred             eeeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccC
Q psy17682         24 RLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGG  103 (490)
Q Consensus        24 ~~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (490)
                      +++..+.+. ++.+..+.=-..+|.+.+|.|+|...++++|.-.....||+.+.+...                   +. 
T Consensus       238 rifqvDGk~-N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k-------------------~~-  296 (514)
T KOG2055|consen  238 RIFQVDGKV-NPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTK-------------------LK-  296 (514)
T ss_pred             EEEEecCcc-ChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccccc-------------------cc-
Confidence            445555443 335666666778999999999996699999999999999998755211                   00 


Q ss_pred             CCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecc-cCCeeEEEECCCCCCEEE
Q psy17682        104 KGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGH-KGPVLDIAWSPHDDNVIA  182 (490)
Q Consensus       104 ~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~~~~~p~~~~~l~  182 (490)
                                                                              .+.|+ +..+.....+|++ ++|+
T Consensus       297 --------------------------------------------------------~~~g~e~~~~e~FeVShd~-~fia  319 (514)
T KOG2055|consen  297 --------------------------------------------------------PPYGVEEKSMERFEVSHDS-NFIA  319 (514)
T ss_pred             --------------------------------------------------------CCCCcccchhheeEecCCC-CeEE
Confidence                                                                    01122 2345667788988 7999


Q ss_pred             EEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcE-
Q psy17682        183 SGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIV-  261 (490)
Q Consensus       183 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v-  261 (490)
                      ..+..|.|.+-...+++.+..+.        -.+.|..++|+.+++ .|++++.+|.|.+||++...++..+.. .+.| 
T Consensus       320 ~~G~~G~I~lLhakT~eli~s~K--------ieG~v~~~~fsSdsk-~l~~~~~~GeV~v~nl~~~~~~~rf~D-~G~v~  389 (514)
T KOG2055|consen  320 IAGNNGHIHLLHAKTKELITSFK--------IEGVVSDFTFSSDSK-ELLASGGTGEVYVWNLRQNSCLHRFVD-DGSVH  389 (514)
T ss_pred             EcccCceEEeehhhhhhhhheee--------eccEEeeEEEecCCc-EEEEEcCCceEEEEecCCcceEEEEee-cCccc
Confidence            99999999999999998887765        567899999999996 777777889999999999999988873 3333 


Q ss_pred             -EEEEEcCCCCEEEEEeCCCeEEEEeCCC------CceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCC
Q psy17682        262 -YSASWNWDGSKLLTTCKDKKMRIINPRT------GAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPD  334 (490)
Q Consensus       262 -~~~~~~~~~~~l~~~~~dg~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~  334 (490)
                       ++++.++++.+||+|+..|.|.|||..+      .+++.++..-.. .|+.+.|++++++|+.++.. ....+++-.+.
T Consensus       390 gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt-~Itsl~Fn~d~qiLAiaS~~-~knalrLVHvP  467 (514)
T KOG2055|consen  390 GTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTT-AITSLQFNHDAQILAIASRV-KKNALRLVHVP  467 (514)
T ss_pred             eeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhhe-eeeeeeeCcchhhhhhhhhc-cccceEEEecc
Confidence             5677788999999999999999999653      345555543333 39999999999999988754 35567776655


Q ss_pred             CCCCCeEEEecc----CCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        335 HLDEPIVMVELD----TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       335 ~~~~~~~~~~~~----~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      +..   .+..++    ..+.+++++|||.+.+| +.|..+|.+.+|.+.
T Consensus       468 S~T---VFsNfP~~n~~vg~vtc~aFSP~sG~l-AvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  468 SCT---VFSNFPTSNTKVGHVTCMAFSPNSGYL-AVGNEAGRVHLFKLH  512 (514)
T ss_pred             cee---eeccCCCCCCcccceEEEEecCCCceE-EeecCCCceeeEeec
Confidence            432   122222    23458999999999999 889999999999875

>KOG1007|consensus

Probab=99.85  E-value=1.9e-19  Score=151.86  Aligned_cols=279  Identities=15%  Similarity=0.175  Sum_probs=200.3

Q ss_pred             eeeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCC-------CeEEEEeCCCCCCCCCCCccccceeccccc
Q psy17682         24 RLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKE-------AEPILISLKDGYIPPSEKSKSALKVTKRSN   96 (490)
Q Consensus        24 ~~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D-------~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~   96 (490)
                      ++.+|++.........|..|.+.|..++-+|..+.+|+|+-.|       ..+-||.+....-+.               
T Consensus        43 hll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S---------------  107 (370)
T KOG1007|consen   43 HLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQS---------------  107 (370)
T ss_pred             EEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCcc---------------
Confidence            4666777777777788889999999999999988888888553       234566654422000               


Q ss_pred             eeecccCCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceee-cccCCeeEEEECC
Q psy17682         97 VLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVG-GHKGPVLDIAWSP  175 (490)
Q Consensus        97 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p  175 (490)
                                                                            .....+++..+. .|-+.|.|+.|.|
T Consensus       108 ------------------------------------------------------~~~tlE~v~~Ldteavg~i~cvew~P  133 (370)
T KOG1007|consen  108 ------------------------------------------------------NSSTLECVASLDTEAVGKINCVEWEP  133 (370)
T ss_pred             ------------------------------------------------------ccchhhHhhcCCHHHhCceeeEEEcC
Confidence                                                                  000111222232 4557999999999


Q ss_pred             CCCCEEEEEeCCCcEEEEECCCCCc-ccccccceeeecccccCEEEEEEeeC-CCCEEEEEeCCCcEEEEECCCCeeEEE
Q psy17682        176 HDDNVIASGSEDCVVKVWQIPDGGI-SRTLTEPVVDLLYHQRRVGLVLWHPT-AQNVLLTAGSDNNVAIWNVGTGEIMIQ  253 (490)
Q Consensus       176 ~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~s~~~dg~v~iwd~~~~~~~~~  253 (490)
                      ++ ..+++-. |..|.+|++..+.. +..+..+  .-.++....++-+|+|. ..+.+++. .|+++..||+++.+....
T Consensus       134 ns-~klasm~-dn~i~l~~l~ess~~vaev~ss--~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~s  208 (370)
T KOG1007|consen  134 NS-DKLASMD-DNNIVLWSLDESSKIVAEVLSS--ESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNS  208 (370)
T ss_pred             CC-CeeEEec-cCceEEEEcccCcchheeeccc--ccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcc
Confidence            87 5666654 88999999988766 3322211  11225667889999993 22456555 579999999998887776


Q ss_pred             Ee-cCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCC-ceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEE
Q psy17682        254 IE-CHPDIVYSASWNWDGS-KLLTTCKDKKMRIINPRTG-AIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYS  329 (490)
Q Consensus       254 ~~-~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~  329 (490)
                      +. .|...|..+.|+|+-+ +|++++.||.|+|||+|.. .++.++.+|... +.++.|+|. .+++.+|+   .|..|.
T Consensus       209 I~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHW-vW~VRfn~~hdqLiLs~~---SDs~V~  284 (370)
T KOG1007|consen  209 IEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHW-VWAVRFNPEHDQLILSGG---SDSAVN  284 (370)
T ss_pred             hhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceE-EEEEEecCccceEEEecC---CCceeE
Confidence            65 7888999999999775 7888999999999999965 577888888886 999999998 55667776   688888


Q ss_pred             EecCCCCCC-----------------------CeE---E-EeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        330 LRAPDHLDE-----------------------PIV---M-VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       330 iwd~~~~~~-----------------------~~~---~-~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      +|....-..                       ++.   + ..-.|...|.+++||.-..++|++-+.||.+.|=.+..
T Consensus       285 Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~r  362 (370)
T KOG1007|consen  285 LSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVPR  362 (370)
T ss_pred             EEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEeecCCh
Confidence            886543210                       000   0 11246678999999999999999999999998866543

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.85  E-value=3.4e-17  Score=160.26  Aligned_cols=337  Identities=20%  Similarity=0.315  Sum_probs=238.4

Q ss_pred             ecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEe
Q psy17682         39 DLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITI  118 (490)
Q Consensus        39 ~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  118 (490)
                      .+.+|...|.++.+.+.+ ..++.++.|+.+.+|+...+..                 ....+.....    ..+..+.+
T Consensus        60 ~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~-----------------~~~~~~~~~~----~~~~~~~~  117 (466)
T COG2319          60 LLRGHEDSITSIAFSPDG-ELLLSGSSDGTIKLWDLDNGEK-----------------LIKSLEGLHD----SSVSKLAL  117 (466)
T ss_pred             eeeeccceEEEEEECCCC-cEEEEecCCCcEEEEEcCCCce-----------------eEEEEeccCC----CceeeEEE
Confidence            678999999999999999 7888888999999999987540                 0000000000    23344444


Q ss_pred             -ccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeC-CCcEEEEECC
Q psy17682        119 -SEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSE-DCVVKVWQIP  196 (490)
Q Consensus       119 -s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~-dg~i~iwd~~  196 (490)
                       +++..   .........++.+.+|+...       .......+..|...|.+++|+|++ ..+++++. |+.+++|++.
T Consensus       118 ~~~~~~---~~~~~~~~~d~~~~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  186 (466)
T COG2319         118 SSPDGN---SILLASSSLDGTVKLWDLST-------PGKLIRTLEGHSESVTSLAFSPDG-KLLASGSSLDGTIKLWDLR  186 (466)
T ss_pred             ECCCcc---eEEeccCCCCccEEEEEecC-------CCeEEEEEecCcccEEEEEECCCC-CEEEecCCCCCceEEEEcC
Confidence             33321   12223344488999999851       123455678999999999999988 58888875 9999999998


Q ss_pred             CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEE-EEecCCCcEEEEEEcCCCCEEEE
Q psy17682        197 DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMI-QIECHPDIVYSASWNWDGSKLLT  275 (490)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~  275 (490)
                      .+.....       +.+|...|.+++|+|++..++++++.|+.|++||...+..+. .+..|.... ...|+|++..+++
T Consensus       187 ~~~~~~~-------~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  258 (466)
T COG2319         187 TGKPLST-------LAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLAS  258 (466)
T ss_pred             CCceEEe-------eccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEE
Confidence            7544443       445899999999999985355555899999999998887777 677787775 4489999988999


Q ss_pred             EeCCCeEEEEeCCCCce-eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeee
Q psy17682        276 TCKDKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFP  354 (490)
Q Consensus       276 ~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~  354 (490)
                      ++.|+.+++|+++.... ...+..|.. .+.++.|.|++..+++++   .++.+.+|+..............+...+..+
T Consensus       259 ~~~d~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (466)
T COG2319         259 GSSDGTIRLWDLRSSSSLLRTLSGHSS-SVLSVAFSPDGKLLASGS---SDGTVRLWDLETGKLLSSLTLKGHEGPVSSL  334 (466)
T ss_pred             ecCCCcEEEeeecCCCcEEEEEecCCc-cEEEEEECCCCCEEEEee---CCCcEEEEEcCCCceEEEeeecccCCceEEE
Confidence            99999999999997765 444445544 589999999888887776   4566999988776543333322444468888


Q ss_pred             eecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEe---ecceeEEEEecCCC
Q psy17682        355 LYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVN---SCEIGRFFRLNNSG  425 (490)
Q Consensus       355 ~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~---~~~~~~~~~~~~~~  425 (490)
                      .|.+++..++.++..|+.+.+|++....    ..........+..+.+++ ......   ....+.+|+.....
T Consensus       335 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  403 (466)
T COG2319         335 SFSPDGSLLVSGGSDDGTIRLWDLRTGK----PLKTLEGHSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGS  403 (466)
T ss_pred             EECCCCCEEEEeecCCCcEEeeecCCCc----eeEEecCCceEEEEEECC-CCCEEEEecCCCceEEEecccCe
Confidence            8843335664554788999999998875    122222222378889988 533333   34577888887765

>KOG0642|consensus

Probab=99.85  E-value=2.3e-20  Score=171.25  Aligned_cols=266  Identities=17%  Similarity=0.168  Sum_probs=189.2

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      ..++..|.+.|..++|+|.. ..|++|+.||++++|+++....                                     
T Consensus       287 k~tl~s~~d~ir~l~~~~se-p~lit~sed~~lk~WnLqk~~~-------------------------------------  328 (577)
T KOG0642|consen  287 KFTLRSHDDCIRALAFHPSE-PVLITASEDGTLKLWNLQKAKK-------------------------------------  328 (577)
T ss_pred             eeeeecchhhhhhhhcCCCC-CeEEEeccccchhhhhhcccCC-------------------------------------
Confidence            34899999999999999998 8999999999999999943110                                     


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP  196 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~  196 (490)
                                                       .......++.++++|+++|.|++..+++ ..+++|+-||+|+.|++.
T Consensus       329 ---------------------------------s~~~~~epi~tfraH~gPVl~v~v~~n~-~~~ysgg~Dg~I~~w~~p  374 (577)
T KOG0642|consen  329 ---------------------------------SAEKDVEPILTFRAHEGPVLCVVVPSNG-EHCYSGGIDGTIRCWNLP  374 (577)
T ss_pred             ---------------------------------ccccceeeeEEEecccCceEEEEecCCc-eEEEeeccCceeeeeccC
Confidence                                             0001122455788999999999999988 899999999999999876


Q ss_pred             CCCcccccc---cceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecC--CCcEEEEEEcCCC-
Q psy17682        197 DGGISRTLT---EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH--PDIVYSASWNWDG-  270 (490)
Q Consensus       197 ~~~~~~~~~---~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~-  270 (490)
                      .........   .....+.||.+.|+.+++++... .|++++.||+++.|+.....+ +++...  .+.-.++.+-... 
T Consensus       375 ~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~-~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~  452 (577)
T KOG0642|consen  375 PNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKD-RLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRP  452 (577)
T ss_pred             CCCCcccccCcchhccceeccccceeeeeeccccc-ceeeecCCceEEeeccCCcCc-cccCCccccCCcceEeeccchh
Confidence            332211111   22235788999999999999875 799999999999999876665 444321  2233455554322 


Q ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeeeec------CCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIEEEAVCH------EGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE  344 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~  344 (490)
                      .+.++...-+.--+++......+..+...      ....+..+.++|.+.+..++.   .++.|+++|..++...  ...
T Consensus       453 a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~h---ed~~Ir~~dn~~~~~l--~s~  527 (577)
T KOG0642|consen  453 AHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAH---EDRSIRFFDNKTGKIL--HSM  527 (577)
T ss_pred             HhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecc---cCCceecccccccccc--hhe
Confidence            22222222333333444444333333211      112367788889988888877   6999999999987642  233


Q ss_pred             ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        345 LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       345 ~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      ..|...++++++.|+|.+| ++|+.|+.+++|.+....
T Consensus       528 ~a~~~svtslai~~ng~~l-~s~s~d~sv~l~kld~k~  564 (577)
T KOG0642|consen  528 VAHKDSVTSLAIDPNGPYL-MSGSHDGSVRLWKLDVKT  564 (577)
T ss_pred             eeccceecceeecCCCceE-EeecCCceeehhhccchh
Confidence            3567789999999999999 899999999999997754

>KOG1963|consensus

Probab=99.84  E-value=1.3e-17  Score=161.16  Aligned_cols=291  Identities=12%  Similarity=0.122  Sum_probs=209.7

Q ss_pred             CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEE
Q psy17682        113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKV  192 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~i  192 (490)
                      +++.++||..     .+++++..+|.|.+|.-.    .........+.+.-|...|.+++|+++| .+|++|+..|.+-+
T Consensus       208 ~t~~~~spn~-----~~~Aa~d~dGrI~vw~d~----~~~~~~~t~t~lHWH~~~V~~L~fS~~G-~~LlSGG~E~VLv~  277 (792)
T KOG1963|consen  208 ITCVALSPNE-----RYLAAGDSDGRILVWRDF----GSSDDSETCTLLHWHHDEVNSLSFSSDG-AYLLSGGREGVLVL  277 (792)
T ss_pred             ceeEEecccc-----ceEEEeccCCcEEEEecc----ccccccccceEEEecccccceeEEecCC-ceEeecccceEEEE
Confidence            4567777773     678899999999999875    2122334566788899999999999999 89999999999999


Q ss_pred             EECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec-----------CCCcE
Q psy17682        193 WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-----------HPDIV  261 (490)
Q Consensus       193 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-----------~~~~v  261 (490)
                      |.+.+++. +-       ++.-.++|..+.++|++. +.+....|+.|.+..+.+.+...++.+           ..+-.
T Consensus       278 Wq~~T~~k-qf-------LPRLgs~I~~i~vS~ds~-~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~  348 (792)
T KOG1963|consen  278 WQLETGKK-QF-------LPRLGSPILHIVVSPDSD-LYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLT  348 (792)
T ss_pred             EeecCCCc-cc-------ccccCCeeEEEEEcCCCC-eEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccc
Confidence            99999873 22       334778999999999996 777778899999998765544333332           23346


Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeee-----cCCC-----ceeEEEEeCCCcEEEEEeCC-------Cc
Q psy17682        262 YSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVC-----HEGS-----KATRAIYLKSGLIFTTGFSK-------MS  324 (490)
Q Consensus       262 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~-----~~~~~~~s~~~~~l~~~~~~-------~~  324 (490)
                      +.++++|-.+.++-.+..|.|.+||+-+.+.+..+..     +.+.     .++.++.+..|.++++.-..       ..
T Consensus       349 t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~  428 (792)
T KOG1963|consen  349 TGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDG  428 (792)
T ss_pred             eeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCc
Confidence            7788999777888889999999999998877666541     1111     25667777779999886421       12


Q ss_pred             eeEEEEecCCCCCCCeEE---EeccCCCceeeeeecCCCCe-EEEEecCCCeEEEEEecCCCCe--------eEEeeeee
Q psy17682        325 ERQYSLRAPDHLDEPIVM---VELDTSNGVMFPLYDPDTNL-VYLCGKGDSVIRYFEITAEPPF--------VHYINTFQ  392 (490)
Q Consensus       325 ~~~i~iwd~~~~~~~~~~---~~~~~~~~i~~~~~s~~~~~-l~~~g~~dg~i~iwd~~~~~~~--------~~~~~~~~  392 (490)
                      ...+++|-.....+...+   ...+|...+...++.+..+- .+++++.||.++||-+...+..        ...+..+ 
T Consensus       429 e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy-  507 (792)
T KOG1963|consen  429 EVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSY-  507 (792)
T ss_pred             eEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeecc-
Confidence            456888977655443322   23456555555555443332 4578899999999999544321        1122223 


Q ss_pred             CCCceeeEEEeeCceeEEee-cceeEEEEecC
Q psy17682        393 TPDPQRGIGMMPKRGCDVNS-CEIGRFFRLNN  423 (490)
Q Consensus       393 ~~~~i~~~~~sp~~~~l~~~-~~~~~~~~~~~  423 (490)
                      +..+++.++|+.||.+++.+ ++.+.+|+..+
T Consensus       508 ~k~~i~a~~fs~dGslla~s~~~~Itiwd~~~  539 (792)
T KOG1963|consen  508 HKTPITALCFSQDGSLLAVSFDDTITIWDYDT  539 (792)
T ss_pred             ccCcccchhhcCCCcEEEEecCCEEEEecCCC
Confidence            45789999999999998887 66899999888

>KOG0650|consensus

Probab=99.83  E-value=1.8e-19  Score=166.25  Aligned_cols=238  Identities=19%  Similarity=0.262  Sum_probs=181.8

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      ...+.||++.|.|+...|.| ..|++|+.||+|+||.+.++.+++.+.        ..+.|.|++|+|.+...++++...
T Consensus       393 ~lvyrGHtg~Vr~iSvdp~G-~wlasGsdDGtvriWEi~TgRcvr~~~--------~d~~I~~vaw~P~~~~~vLAvA~~  463 (733)
T KOG0650|consen  393 ALVYRGHTGLVRSISVDPSG-EWLASGSDDGTVRIWEIATGRCVRTVQ--------FDSEIRSVAWNPLSDLCVLAVAVG  463 (733)
T ss_pred             eeeEeccCCeEEEEEecCCc-ceeeecCCCCcEEEEEeecceEEEEEe--------ecceeEEEEecCCCCceeEEEEec
Confidence            44678999999999999987 899999999999999999999998765        566899999999976655555555


Q ss_pred             CcEEEEECCCC------------------------------------e-eEEEEecCCCcEEEEEEcCCCCEEEEEeCC-
Q psy17682        238 NNVAIWNVGTG------------------------------------E-IMIQIECHPDIVYSASWNWDGSKLLTTCKD-  279 (490)
Q Consensus       238 g~v~iwd~~~~------------------------------------~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-  279 (490)
                      +.+.|-+..-|                                    + -++..-.|...|..+.|+..|.+|++...+ 
T Consensus       464 ~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~  543 (733)
T KOG0650|consen  464 ECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDS  543 (733)
T ss_pred             CceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCC
Confidence            55554432111                                    0 112222477889999999999999998754 


Q ss_pred             --CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeec
Q psy17682        280 --KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYD  357 (490)
Q Consensus       280 --g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s  357 (490)
                        ..|.|+++.......-+....+ .+.++.|+|...+|.+++    ...|+|||+.......  ........|..++.+
T Consensus       544 ~~~~VliHQLSK~~sQ~PF~kskG-~vq~v~FHPs~p~lfVaT----q~~vRiYdL~kqelvK--kL~tg~kwiS~msih  616 (733)
T KOG0650|consen  544 GNKSVLIHQLSKRKSQSPFRKSKG-LVQRVKFHPSKPYLFVAT----QRSVRIYDLSKQELVK--KLLTGSKWISSMSIH  616 (733)
T ss_pred             CcceEEEEecccccccCchhhcCC-ceeEEEecCCCceEEEEe----ccceEEEehhHHHHHH--HHhcCCeeeeeeeec
Confidence              5699999987766555543344 489999999988888886    7899999998643221  222344568999999


Q ss_pred             CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc
Q psy17682        358 PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       358 ~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  414 (490)
                      |.|..| +.|+.|+.+..||+.-.....+.+.  .|...+++++|++.-.+++++.+
T Consensus       617 p~GDnl-i~gs~d~k~~WfDldlsskPyk~lr--~H~~avr~Va~H~ryPLfas~sd  670 (733)
T KOG0650|consen  617 PNGDNL-ILGSYDKKMCWFDLDLSSKPYKTLR--LHEKAVRSVAFHKRYPLFASGSD  670 (733)
T ss_pred             CCCCeE-EEecCCCeeEEEEcccCcchhHHhh--hhhhhhhhhhhccccceeeeecC
Confidence            999999 6899999999999987653333332  34468999999999999888855

>KOG0649|consensus

Probab=99.82  E-value=7.6e-18  Score=138.92  Aligned_cols=205  Identities=17%  Similarity=0.205  Sum_probs=149.5

Q ss_pred             eecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCc------ccccccceeeecccccCEEEEEEeeCCCCEEEEE
Q psy17682        161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGI------SRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTA  234 (490)
Q Consensus       161 ~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~------~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~  234 (490)
                      .++|.++|+.++|+  . .+|++|+ ||.|+-|..+....      +.....|...-.-.-..|+++...|... -++.+
T Consensus        58 eqahdgpiy~~~f~--d-~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~en-Si~~A  132 (325)
T KOG0649|consen   58 EQAHDGPIYYLAFH--D-DFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSEN-SILFA  132 (325)
T ss_pred             ccccCCCeeeeeee--h-hheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCC-cEEEe
Confidence            36999999999999  2 5777776 59999998764332      1122223222111234588999998874 45555


Q ss_pred             eCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCc-------eeEE
Q psy17682        235 GSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSK-------ATRA  307 (490)
Q Consensus       235 ~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~-------~~~~  307 (490)
                      +.|+.++-||+++|+...++++|++.|.++.-......+++|+.||++|+||+++++.++.+.......       -...
T Consensus       133 gGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wig  212 (325)
T KOG0649|consen  133 GGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIG  212 (325)
T ss_pred             cCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeE
Confidence            589999999999999999999999999999986666689999999999999999999888776332211       1124


Q ss_pred             EEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        308 IYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       308 ~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      +..-+..++++|.    ...+.+|.++..++...+   .-...+..+.|..|  .+ ++++..+.|.-|.+..
T Consensus       213 ala~~edWlvCGg----Gp~lslwhLrsse~t~vf---pipa~v~~v~F~~d--~v-l~~G~g~~v~~~~l~G  275 (325)
T KOG0649|consen  213 ALAVNEDWLVCGG----GPKLSLWHLRSSESTCVF---PIPARVHLVDFVDD--CV-LIGGEGNHVQSYTLNG  275 (325)
T ss_pred             EEeccCceEEecC----CCceeEEeccCCCceEEE---ecccceeEeeeecc--eE-EEeccccceeeeeecc
Confidence            4555677888885    678999999987653333   33456777888654  34 5677778899998865

>KOG1007|consensus

Probab=99.82  E-value=3.2e-18  Score=144.60  Aligned_cols=267  Identities=19%  Similarity=0.268  Sum_probs=189.4

Q ss_pred             CCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCC-------CcEEEEECCCCCcccccc-
Q psy17682        134 KSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSED-------CVVKVWQIPDGGISRTLT-  205 (490)
Q Consensus       134 ~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~-  205 (490)
                      ..++.|.+..++.     ....-...++..|.+.|+.++-+|.+..+|+|+..+       ..+-||.+.......... 
T Consensus        37 K~dNqVhll~~d~-----e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~t  111 (370)
T KOG1007|consen   37 KEDNQVHLLRLDS-----EGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSST  111 (370)
T ss_pred             CCcceeEEEEecC-----ccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccch
Confidence            4566777777651     111223446778999999999999988888888653       247799987543221100 


Q ss_pred             -cceeeec-ccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee-EEEEe-----cCCCcEEEEEEcC--CCCEEEE
Q psy17682        206 -EPVVDLL-YHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI-MIQIE-----CHPDIVYSASWNW--DGSKLLT  275 (490)
Q Consensus       206 -~~~~~~~-~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~-~~~~~-----~~~~~v~~~~~~~--~~~~l~~  275 (490)
                       ..+..+. .+-+.|.|+.|.|++. .+++.. |..|.+|++..+.. +..+.     .+....++-+|+|  +++.+++
T Consensus       112 lE~v~~Ldteavg~i~cvew~Pns~-klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~t  189 (370)
T KOG1007|consen  112 LECVASLDTEAVGKINCVEWEPNSD-KLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVAT  189 (370)
T ss_pred             hhHhhcCCHHHhCceeeEEEcCCCC-eeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEE
Confidence             1111122 3556899999999986 666664 78999999987765 33332     3566788889999  7777777


Q ss_pred             EeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc-EEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeee
Q psy17682        276 TCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL-IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFP  354 (490)
Q Consensus       276 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~  354 (490)
                      .+ |+++..||+|+.++...+....+..+..+.|.|+-+ +|++++   .|+.|+|||.+..+.+.... .+|...++++
T Consensus       190 t~-d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~g---DdgyvriWD~R~tk~pv~el-~~HsHWvW~V  264 (370)
T KOG1007|consen  190 TS-DSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCG---DDGYVRIWDTRKTKFPVQEL-PGHSHWVWAV  264 (370)
T ss_pred             eC-CCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcC---CCccEEEEeccCCCcccccc-CCCceEEEEE
Confidence            54 799999999998887777744445699999999955 667776   58999999999877665433 3677789999


Q ss_pred             eecCCCCeEEEEecCCCeEEEEEecCCC------------------------Cee-EEeeeee-CCCceeeEEEeeCcee
Q psy17682        355 LYDPDTNLVYLCGKGDSVIRYFEITAEP------------------------PFV-HYINTFQ-TPDPQRGIGMMPKRGC  408 (490)
Q Consensus       355 ~~s~~~~~l~~~g~~dg~i~iwd~~~~~------------------------~~~-~~~~~~~-~~~~i~~~~~sp~~~~  408 (490)
                      .|+|.-..|+++|+.|..|.+|....-.                        |+. ..+..+. +.+.|.+++||.-..+
T Consensus       265 Rfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPW  344 (370)
T KOG1007|consen  265 RFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPW  344 (370)
T ss_pred             EecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCe
Confidence            9999988888999999999999764211                        010 0122222 4568999999988877


Q ss_pred             EEee
Q psy17682        409 DVNS  412 (490)
Q Consensus       409 l~~~  412 (490)
                      +.++
T Consensus       345 iFAS  348 (370)
T KOG1007|consen  345 IFAS  348 (370)
T ss_pred             eEEE
Confidence            6665

>KOG1538|consensus

Probab=99.82  E-value=9.7e-19  Score=163.35  Aligned_cols=239  Identities=16%  Similarity=0.179  Sum_probs=169.9

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      .+++++|++.|+|++|+.+| .++++|+.|..|.+|+-+-...++         ..|.+.|.|+.|+|-. +.|++++-.
T Consensus        46 lqtLKgHKDtVycVAys~dG-krFASG~aDK~VI~W~~klEG~Lk---------YSH~D~IQCMsFNP~~-h~LasCsLs  114 (1081)
T KOG1538|consen   46 LQPLKGHKDTVYCVAYAKDG-KRFASGSADKSVIIWTSKLEGILK---------YSHNDAIQCMSFNPIT-HQLASCSLS  114 (1081)
T ss_pred             ccccccccceEEEEEEccCC-ceeccCCCceeEEEecccccceee---------eccCCeeeEeecCchH-HHhhhcchh
Confidence            34678999999999999998 899999999999999864333222         2399999999999998 488888764


Q ss_pred             CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee--ecCCCceeEEEEeCC---
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV--CHEGSKATRAIYLKS---  312 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~s~~---  312 (490)
                       ..-+|...... +...+ ....+.+++|..||++++.|-.+|+|.|=+-. ++....+.  +..+.++.+++|+|.   
T Consensus       115 -dFglWS~~qK~-V~K~k-ss~R~~~CsWtnDGqylalG~~nGTIsiRNk~-gEek~~I~Rpgg~Nspiwsi~~~p~sg~  190 (1081)
T KOG1538|consen  115 -DFGLWSPEQKS-VSKHK-SSSRIICCSWTNDGQYLALGMFNGTISIRNKN-GEEKVKIERPGGSNSPIWSICWNPSSGE  190 (1081)
T ss_pred             -hccccChhhhh-HHhhh-hheeEEEeeecCCCcEEEEeccCceEEeecCC-CCcceEEeCCCCCCCCceEEEecCCCCC
Confidence             46788865433 33333 35678899999999999999999999988644 33333333  444557999999997   


Q ss_pred             --CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee
Q psy17682        313 --GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT  390 (490)
Q Consensus       313 --~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~  390 (490)
                        ...+++..   ...++.++.+.... .-....  -.-...++.+.++|.++ +.|+.|+.+.+|--..-.  ...+..
T Consensus       191 G~~di~aV~D---W~qTLSFy~LsG~~-Igk~r~--L~FdP~CisYf~NGEy~-LiGGsdk~L~~fTR~Gvr--LGTvg~  261 (1081)
T KOG1538|consen  191 GRNDILAVAD---WGQTLSFYQLSGKQ-IGKDRA--LNFDPCCISYFTNGEYI-LLGGSDKQLSLFTRDGVR--LGTVGE  261 (1081)
T ss_pred             CccceEEEEe---ccceeEEEEeccee-eccccc--CCCCchhheeccCCcEE-EEccCCCceEEEeecCeE--Eeeccc
Confidence              23566555   56677777776421 110111  11124678889999999 578889999998654321  112222


Q ss_pred             eeCCCceeeEEEeeCceeEEeecc--eeEEEEec
Q psy17682        391 FQTPDPQRGIGMMPKRGCDVNSCE--IGRFFRLN  422 (490)
Q Consensus       391 ~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~~~  422 (490)
                        ....|+.++..|+++..+.||-  ++..|++.
T Consensus       262 --~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~  293 (1081)
T KOG1538|consen  262 --QDSWIWTVQAKPNSQYVVVGCQDGTIACYNLI  293 (1081)
T ss_pred             --cceeEEEEEEccCCceEEEEEccCeeehhhhH
Confidence              3358999999999999888854  55556543

>KOG2110|consensus

Probab=99.82  E-value=1.3e-16  Score=139.57  Aligned_cols=243  Identities=10%  Similarity=0.077  Sum_probs=175.3

Q ss_pred             cccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccc
Q psy17682         42 YHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISED  121 (490)
Q Consensus        42 gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  121 (490)
                      +....++.+.|+.+. ..|..|+.||. ++++........                     .  .......|-.+-||..
T Consensus         3 ~~~~ti~~~~~Nqd~-~~lsvGs~~Gy-k~~~~~~~~k~~---------------------~--~~~~~~~IvEmLFSSS   57 (391)
T KOG2110|consen    3 GKKPTINFIGFNQDS-TLLSVGSKDGY-KIFSCSPFEKCF---------------------S--KDTEGVSIVEMLFSSS   57 (391)
T ss_pred             CCCcceeeeeeccce-eEEEccCCCce-eEEecCchHHhh---------------------c--ccCCCeEEEEeecccc
Confidence            344567788899888 88999999998 888876533100                     0  0001113444455544


Q ss_pred             cccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcc
Q psy17682        122 YVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGIS  201 (490)
Q Consensus       122 ~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~  201 (490)
                           +-.++.......++++++.    +...    +..+ -...+|.++.++.   ++|+++-++ .|.|||+++.+.+
T Consensus        58 -----LvaiV~~~qpr~Lkv~~~K----k~~~----ICe~-~fpt~IL~VrmNr---~RLvV~Lee-~IyIydI~~MklL  119 (391)
T KOG2110|consen   58 -----LVAIVSIKQPRKLKVVHFK----KKTT----ICEI-FFPTSILAVRMNR---KRLVVCLEE-SIYIYDIKDMKLL  119 (391)
T ss_pred             -----eeEEEecCCCceEEEEEcc----cCce----EEEE-ecCCceEEEEEcc---ceEEEEEcc-cEEEEecccceee
Confidence                 2223333444567777764    1111    1111 2346899999984   567777665 5999999999998


Q ss_pred             cccccceeeecccccCEEEEEEeeCCCCEEEE-Ee-CCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC
Q psy17682        202 RTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLT-AG-SDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD  279 (490)
Q Consensus       202 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s-~~-~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  279 (490)
                      +++..    ...+...+..+++++.+. +++- ++ ..|.|.+||+.+-+++..+..|.+.+.+++|+++|.+||+++..
T Consensus       120 hTI~t----~~~n~~gl~AlS~n~~n~-ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeK  194 (391)
T KOG2110|consen  120 HTIET----TPPNPKGLCALSPNNANC-YLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEK  194 (391)
T ss_pred             hhhhc----cCCCccceEeeccCCCCc-eEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccC
Confidence            87753    333666677777777764 5553 33 25899999999999999999999999999999999999999999


Q ss_pred             Ce-EEEEeCCCCceeeeee-ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCC
Q psy17682        280 KK-MRIINPRTGAIEEEAV-CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDH  335 (490)
Q Consensus       280 g~-i~iwd~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~  335 (490)
                      |+ ||++.+.+|+.+.+++ +.....+++++|+|++.+|++.+   ..++|+++.+..
T Consensus       195 GTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS---~TeTVHiFKL~~  249 (391)
T KOG2110|consen  195 GTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASS---NTETVHIFKLEK  249 (391)
T ss_pred             ceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEec---CCCeEEEEEecc
Confidence            98 8999999999999887 33344589999999999999888   688999998764

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.82  E-value=7.4e-17  Score=152.09  Aligned_cols=276  Identities=16%  Similarity=0.180  Sum_probs=178.5

Q ss_pred             eeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE-eCCCcEEEEECCCCCcccccccceee
Q psy17682        132 KLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG-SEDCVVKVWQIPDGGISRTLTEPVVD  210 (490)
Q Consensus       132 ~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~  210 (490)
                      +...++.|.+|++.    ..+++ ..+..+. +.+....++++|++ ++|+++ ..++.|.+|++.....+.....    
T Consensus         7 ~~~~~~~I~~~~~~----~~g~l-~~~~~~~-~~~~~~~l~~spd~-~~lyv~~~~~~~i~~~~~~~~g~l~~~~~----   75 (330)
T PRK11028          7 ASPESQQIHVWNLN----HEGAL-TLLQVVD-VPGQVQPMVISPDK-RHLYVGVRPEFRVLSYRIADDGALTFAAE----   75 (330)
T ss_pred             EcCCCCCEEEEEEC----CCCce-eeeeEEe-cCCCCccEEECCCC-CEEEEEECCCCcEEEEEECCCCceEEeee----
Confidence            34668999999985    22322 1233333 34567789999998 566544 5688999999863222111110    


Q ss_pred             ecccccCEEEEEEeeCCCCEEEEEe-CCCcEEEEECCC-C---eeEEEEecCCCcEEEEEEcCCCCEEEEEe-CCCeEEE
Q psy17682        211 LLYHQRRVGLVLWHPTAQNVLLTAG-SDNNVAIWNVGT-G---EIMIQIECHPDIVYSASWNWDGSKLLTTC-KDKKMRI  284 (490)
Q Consensus       211 ~~~~~~~v~~~~~~p~~~~~l~s~~-~dg~v~iwd~~~-~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i  284 (490)
                      .. .......++|+|+++ ++++++ .++.|.+|++.+ +   +.+..+. +......++++|+++++++++ .++.|.+
T Consensus        76 ~~-~~~~p~~i~~~~~g~-~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v  152 (330)
T PRK11028         76 SP-LPGSPTHISTDHQGR-FLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRL  152 (330)
T ss_pred             ec-CCCCceEEEECCCCC-EEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEE
Confidence            11 233467899999997 555554 589999999964 2   2233333 334567889999999886555 5699999


Q ss_pred             EeCCCCceee-----eeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC-CCeEEEecc-------CCCce
Q psy17682        285 INPRTGAIEE-----EAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD-EPIVMVELD-------TSNGV  351 (490)
Q Consensus       285 wd~~~~~~~~-----~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~-~~~~~~~~~-------~~~~i  351 (490)
                      ||+.+...+.     ......+.....++|+|+|+++++...  .++.|.+|+++... .........       +....
T Consensus       153 ~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~--~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  230 (330)
T PRK11028        153 FTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNE--LNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWA  230 (330)
T ss_pred             EEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEec--CCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccc
Confidence            9998633221     112222333678999999999988763  37899999997421 111121111       11123


Q ss_pred             eeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec---ceeEEEEecC
Q psy17682        352 MFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC---EIGRFFRLNN  423 (490)
Q Consensus       352 ~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~---~~~~~~~~~~  423 (490)
                      ..+.++|+|+++|++...++.|.+|++.........+.........+.++|+|+|++++++.   +.+.+|+++.
T Consensus       231 ~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~  305 (330)
T PRK11028        231 ADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDG  305 (330)
T ss_pred             eeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEcC
Confidence            45889999999987766789999999976543333444333334567899999998888663   3778888753

>KOG1009|consensus

Probab=99.82  E-value=1.6e-18  Score=153.05  Aligned_cols=269  Identities=20%  Similarity=0.278  Sum_probs=184.3

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      +.+..|.+|...|+++.|+|+| .+|+||+++|.|.+|....-....                    .. ..        
T Consensus        56 ~y~s~Ls~H~~aVN~vRf~p~g-elLASg~D~g~v~lWk~~~~~~~~--------------------~d-~e--------  105 (434)
T KOG1009|consen   56 EYLSSLSRHTRAVNVVRFSPDG-ELLASGGDGGEVFLWKQGDVRIFD--------------------AD-TE--------  105 (434)
T ss_pred             EEeecccCCcceeEEEEEcCCc-CeeeecCCCceEEEEEecCcCCcc--------------------cc-ch--------
Confidence            3455699999999999999999 999999999999999776511000                    00 00        


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                       .+                                ...+.+...+.+.+|...|..++|+|++ +++++++.|..+++||
T Consensus       106 -~~--------------------------------~~ke~w~v~k~lr~h~~diydL~Ws~d~-~~l~s~s~dns~~l~D  151 (434)
T KOG1009|consen  106 -AD--------------------------------LNKEKWVVKKVLRGHRDDIYDLAWSPDS-NFLVSGSVDNSVRLWD  151 (434)
T ss_pred             -hh--------------------------------hCccceEEEEEecccccchhhhhccCCC-ceeeeeeccceEEEEE
Confidence             00                                0111122344667899999999999998 8999999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe----------c--------
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE----------C--------  256 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~----------~--------  256 (490)
                      +..|+....+       ..|...+..++|.|-++ ++++-+.|...+.+.+...+.++...          .        
T Consensus       152 v~~G~l~~~~-------~dh~~yvqgvawDpl~q-yv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rL  223 (434)
T KOG1009|consen  152 VHAGQLLAIL-------DDHEHYVQGVAWDPLNQ-YVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRL  223 (434)
T ss_pred             eccceeEeec-------cccccccceeecchhhh-hhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeee
Confidence            9999877654       45999999999999986 88998888877777765433322211          0        


Q ss_pred             -CC----CcEEEEEEcCCCCEEEEEeC----CC-----eEEEEeCCC-CceeeeeeecCCCceeEEEEe-----------
Q psy17682        257 -HP----DIVYSASWNWDGSKLLTTCK----DK-----KMRIINPRT-GAIEEEAVCHEGSKATRAIYL-----------  310 (490)
Q Consensus       257 -~~----~~v~~~~~~~~~~~l~~~~~----dg-----~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~s-----------  310 (490)
                       |.    .-...++|+|+|.++++.+.    ++     +.++|+-.. .++...+.+.... ...+.++           
T Consensus       224 fhDeTlksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~-~lavr~~pVy~elrp~~~  302 (434)
T KOG1009|consen  224 FHDETLKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKP-ALAVRFSPVYYELRPLSS  302 (434)
T ss_pred             eecCchhhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcc-eEEEEeeeeEEEeccccc
Confidence             11    11346789999999988642    22     234554322 1223333222221 2333333           


Q ss_pred             -------CCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        311 -------KSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       311 -------~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                             |-+..++.++    ...+.+||..+.. |.....--|-..++.++|++||..| +..+.||...+--+...+
T Consensus       303 ~~~~~~lpyrlvfaiAt----~~svyvydtq~~~-P~~~v~nihy~~iTDiaws~dg~~l-~vSS~DGyCS~vtfe~~e  375 (434)
T KOG1009|consen  303 EKFLFVLPYRLVFAIAT----KNSVYVYDTQTLE-PLAVVDNIHYSAITDIAWSDDGSVL-LVSSTDGFCSLVTFEPWE  375 (434)
T ss_pred             cccccccccceEEEEee----cceEEEecccccc-ceEEEeeeeeeeecceeecCCCcEE-EEeccCCceEEEEEcchh
Confidence                   2344566665    7789999998744 4444444566789999999999999 567899988887777654

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.81  E-value=1.1e-16  Score=150.99  Aligned_cols=304  Identities=10%  Similarity=0.070  Sum_probs=184.3

Q ss_pred             eEEeeeCCCeEEEEeCCC-CCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEEEeeCCCc
Q psy17682         59 VLLTAGKEAEPILISLKD-GYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQ  137 (490)
Q Consensus        59 ~l~s~~~D~~v~iWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g  137 (490)
                      ++++.+.|+.|.+|++.+ +.+                .........      .....++++|+.  +++  .+....++
T Consensus         4 ~y~~~~~~~~I~~~~~~~~g~l----------------~~~~~~~~~------~~~~~l~~spd~--~~l--yv~~~~~~   57 (330)
T PRK11028          4 VYIASPESQQIHVWNLNHEGAL----------------TLLQVVDVP------GQVQPMVISPDK--RHL--YVGVRPEF   57 (330)
T ss_pred             EEEEcCCCCCEEEEEECCCCce----------------eeeeEEecC------CCCccEEECCCC--CEE--EEEECCCC
Confidence            455567799999999964 221                111111110      134567888885  222  22334678


Q ss_pred             eEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE-eCCCcEEEEECCCCCcccccccceeeeccccc
Q psy17682        138 ALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG-SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQR  216 (490)
Q Consensus       138 ~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  216 (490)
                      .+.+|++.    ..+.+. ..... ...+....++|+|++ ++++++ ..++.|.+|++++......   ....+. +..
T Consensus        58 ~i~~~~~~----~~g~l~-~~~~~-~~~~~p~~i~~~~~g-~~l~v~~~~~~~v~v~~~~~~g~~~~---~~~~~~-~~~  126 (330)
T PRK11028         58 RVLSYRIA----DDGALT-FAAES-PLPGSPTHISTDHQG-RFLFSASYNANCVSVSPLDKDGIPVA---PIQIIE-GLE  126 (330)
T ss_pred             cEEEEEEC----CCCceE-Eeeee-cCCCCceEEEECCCC-CEEEEEEcCCCeEEEEEECCCCCCCC---ceeecc-CCC
Confidence            88889875    222221 11111 122356789999998 555555 4589999999974332211   111111 334


Q ss_pred             CEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEE-------EEecCCCcEEEEEEcCCCCEEEEEeC-CCeEEEEeCC
Q psy17682        217 RVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMI-------QIECHPDIVYSASWNWDGSKLLTTCK-DKKMRIINPR  288 (490)
Q Consensus       217 ~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~  288 (490)
                      ...+++++|+++.++++...++.|.+||+.+...+.       ... .......++|+|++++++++.. +++|.+||+.
T Consensus       127 ~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~-~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~  205 (330)
T PRK11028        127 GCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTV-EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLK  205 (330)
T ss_pred             cccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecC-CCCCCceEEECCCCCEEEEEecCCCEEEEEEEe
Confidence            567889999997555666667999999997633221       111 2344678999999999988876 8999999997


Q ss_pred             C--Cc--eeeeeeecC----C-CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE-EeccCCCceeeeeecC
Q psy17682        289 T--GA--IEEEAVCHE----G-SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM-VELDTSNGVMFPLYDP  358 (490)
Q Consensus       289 ~--~~--~~~~~~~~~----~-~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~-~~~~~~~~i~~~~~s~  358 (490)
                      .  ++  .+..+....    + .....+.++|+|++++++..  .++.|.+|++......... ...........+.++|
T Consensus       206 ~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~--~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~  283 (330)
T PRK11028        206 DPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDR--TASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDH  283 (330)
T ss_pred             CCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecC--CCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECC
Confidence            3  32  233332111    1 11335889999999888752  4689999998654322222 2212223456789999


Q ss_pred             CCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEE
Q psy17682        359 DTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGM  402 (490)
Q Consensus       359 ~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~  402 (490)
                      +|++|+++...+++|.+|++.........+..+..+....+++|
T Consensus       284 dg~~l~va~~~~~~v~v~~~~~~~g~l~~~~~~~~g~~P~~~~~  327 (330)
T PRK11028        284 SGKYLIAAGQKSHHISVYEIDGETGLLTELGRYAVGQGPMWVSV  327 (330)
T ss_pred             CCCEEEEEEccCCcEEEEEEcCCCCcEEEccccccCCCceEEEE
Confidence            99999887777999999998643212334444433334445544

>KOG0290|consensus

Probab=99.81  E-value=6.1e-18  Score=143.02  Aligned_cols=238  Identities=16%  Similarity=0.188  Sum_probs=174.9

Q ss_pred             cccCCeeEEEECCCC----CCEEEEEeCCCcEEEEECCCCCccccccc--ceeeecccccCEEEEEEeeCCCCEEEEEeC
Q psy17682        163 GHKGPVLDIAWSPHD----DNVIASGSEDCVVKVWQIPDGGISRTLTE--PVVDLLYHQRRVGLVLWHPTAQNVLLTAGS  236 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~----~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~  236 (490)
                      .|.-+++.+.|.|+.    ..+|||++ | .+|+|.+...+.......  ....-..+..+++++.|+.-..+++.+++-
T Consensus        94 d~~YP~tK~~wiPd~~g~~pdlLATs~-D-~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSi  171 (364)
T KOG0290|consen   94 DHPYPVTKLMWIPDSKGVYPDLLATSS-D-FLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSI  171 (364)
T ss_pred             CCCCCccceEecCCccccCcchhhccc-C-eEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecc
Confidence            789999999999975    24566654 3 799999874221111100  001122367789999999988889999999


Q ss_pred             CCcEEEEECCCCee---EEEEecCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeeeee-ecC-CCceeEEEEe
Q psy17682        237 DNNVAIWNVGTGEI---MIQIECHPDIVYSASWNWDG-SKLLTTCKDKKMRIINPRTGAIEEEAV-CHE-GSKATRAIYL  310 (490)
Q Consensus       237 dg~v~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~-~~~~~~~~~s  310 (490)
                      |-+..|||++++..   ...+-.|..+|..++|...+ +.+++.+.||.+|+||+|..+-...+. ... ..+...++|+
T Consensus       172 DTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswn  251 (364)
T KOG0290|consen  172 DTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWN  251 (364)
T ss_pred             cCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccC
Confidence            99999999998732   44566899999999999865 589999999999999999876444333 222 3457888888


Q ss_pred             CC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC--CeeEE
Q psy17682        311 KS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP--PFVHY  387 (490)
Q Consensus       311 ~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~--~~~~~  387 (490)
                      ++ .+++|+-..  ....|.|.|++....+.... ..|...|+.++|.|....-+++++.|..+.+||+....  +....
T Consensus       252 kqDpnymATf~~--dS~~V~iLDiR~P~tpva~L-~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dP  328 (364)
T KOG0290|consen  252 KQDPNYMATFAM--DSNKVVILDIRVPCTPVARL-RNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDP  328 (364)
T ss_pred             cCCchHHhhhhc--CCceEEEEEecCCCcceehh-hcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCc
Confidence            76 556665442  35678999999876655443 36778899999999876666899999999999998632  23334


Q ss_pred             eeeeeCCCceeeEEEeeC
Q psy17682        388 INTFQTPDPQRGIGMMPK  405 (490)
Q Consensus       388 ~~~~~~~~~i~~~~~sp~  405 (490)
                      +-.+..+..|+.+.|++.
T Consensus       329 ilay~a~~EVNqi~Ws~~  346 (364)
T KOG0290|consen  329 ILAYTAGGEVNQIQWSSS  346 (364)
T ss_pred             hhhhhccceeeeeeeccc
Confidence            444556678999999964

>KOG1188|consensus

Probab=99.81  E-value=3.8e-18  Score=147.51  Aligned_cols=269  Identities=13%  Similarity=0.165  Sum_probs=181.4

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccC-CCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPT-AQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGG  103 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~-~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (490)
                      +..|++.+ ...+..+.+|..-++.+.|... ++..+.||+.||+|++||++......                      
T Consensus        52 v~lyd~~t-g~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a----------------------  108 (376)
T KOG1188|consen   52 VRLYDKGT-GQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESA----------------------  108 (376)
T ss_pred             EEEEeccc-hhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhh----------------------
Confidence            55677665 6778889999999999999875 66889999999999999998743100                      


Q ss_pred             CCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeeccc-CCeeEEEECCCCCCEEE
Q psy17682        104 KGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHK-GPVLDIAWSPHDDNVIA  182 (490)
Q Consensus       104 ~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~~~~~p~~~~~l~  182 (490)
                                                                            ...+.+|. .+-.|++.+..+ ++++
T Consensus       109 ------------------------------------------------------~~~~~~~~~~~f~~ld~nck~-~ii~  133 (376)
T KOG1188|consen  109 ------------------------------------------------------RISWTQQSGTPFICLDLNCKK-NIIA  133 (376)
T ss_pred             ------------------------------------------------------heeccCCCCCcceEeeccCcC-CeEE
Confidence                                                                  00011222 355566665544 5666


Q ss_pred             EEe----CCCcEEEEECCCCCc-ccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe----eEEE
Q psy17682        183 SGS----EDCVVKVWQIPDGGI-SRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE----IMIQ  253 (490)
Q Consensus       183 s~~----~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~----~~~~  253 (490)
                      +|.    .|-.|.+||++..+. ++.+.      ..|...|++++|+|+.+++|++|+.||.|.+||++...    ....
T Consensus       134 ~GtE~~~s~A~v~lwDvR~~qq~l~~~~------eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~v  207 (376)
T KOG1188|consen  134 CGTELTRSDASVVLWDVRSEQQLLRQLN------ESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHV  207 (376)
T ss_pred             eccccccCceEEEEEEeccccchhhhhh------hhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHh
Confidence            663    356899999998776 55443      34999999999999999999999999999999997543    2233


Q ss_pred             EecCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeeeeeecCC---------CceeEEE-EeC-CCcEEEEEe-
Q psy17682        254 IECHPDIVYSASWNWDG-SKLLTTCKDKKMRIINPRTGAIEEEAVCHEG---------SKATRAI-YLK-SGLIFTTGF-  320 (490)
Q Consensus       254 ~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~-~s~-~~~~l~~~~-  320 (490)
                      + .|...|.++.|..++ +.|.+-+...+..+|+++.+.+...+....-         ..-+-+. .+| +...++.++ 
T Consensus       208 i-N~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~g~  286 (376)
T KOG1188|consen  208 I-NHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGDKDTCALAGT  286 (376)
T ss_pred             h-cccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCCCcceEEEecc
Confidence            3 478889999999877 4688889999999999998875544432210         0011111 223 333444433 


Q ss_pred             CCCceeEEEEecCCCCC--CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        321 SKMSERQYSLRAPDHLD--EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       321 ~~~~~~~i~iwd~~~~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      +.+..+.+.+-|..++.  ........+|...|.++.|...+..+ .+|+.||.+.+|...
T Consensus       287 ~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l-~TGGEDG~l~~Wk~~  346 (376)
T KOG1188|consen  287 DSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVL-YTGGEDGLLQAWKVE  346 (376)
T ss_pred             ccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhccccee-eccCCCceEEEEecC
Confidence            22222233333333322  22223333444557888888777777 799999999999964

>KOG4227|consensus

Probab=99.81  E-value=4.7e-18  Score=149.30  Aligned_cols=302  Identities=9%  Similarity=0.076  Sum_probs=207.6

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      ...+.+|.+.|+++.|+.++ .+|+|||+|..+++|.+.........++.               +. -+.-+...|.++
T Consensus        49 qKD~~~H~GCiNAlqFS~N~-~~L~SGGDD~~~~~W~~de~~~~k~~KPI---------------~~-~~~~H~SNIF~L  111 (609)
T KOG4227|consen   49 QKDVREHTGCINALQFSHND-RFLASGGDDMHGRVWNVDELMVRKTPKPI---------------GV-MEHPHRSNIFSL  111 (609)
T ss_pred             hhhhhhhccccceeeeccCC-eEEeecCCcceeeeechHHHHhhcCCCCc---------------ee-ccCccccceEEE
Confidence            34588999999999999998 99999999999999998753321111111               11 111233457788


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecc---cCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGH---KGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h---~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                      +|...     ...+.++...+++...+++    ...    .+.+ ..|   .+.|+.+..+|.. +.|++.+.++.|.+|
T Consensus       112 ~F~~~-----N~~~~SG~~~~~VI~HDiE----t~q----si~V-~~~~~~~~~VY~m~~~P~D-N~~~~~t~~~~V~~~  176 (609)
T KOG4227|consen  112 EFDLE-----NRFLYSGERWGTVIKHDIE----TKQ----SIYV-ANENNNRGDVYHMDQHPTD-NTLIVVTRAKLVSFI  176 (609)
T ss_pred             EEccC-----CeeEecCCCcceeEeeecc----cce----eeee-ecccCcccceeecccCCCC-ceEEEEecCceEEEE
Confidence            88655     3467788999999999886    111    1222 234   4599999999986 899999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee-EEE------EecCCCcEEEEEE
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI-MIQ------IECHPDIVYSASW  266 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~-~~~------~~~~~~~v~~~~~  266 (490)
                      |.+..........    +........++.|+|..+.+|++.+..+-+.+||.+..+. +..      ++.....-.++.|
T Consensus       177 D~Rd~~~~~~~~~----~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~  252 (609)
T KOG4227|consen  177 DNRDRQNPISLVL----PANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLW  252 (609)
T ss_pred             eccCCCCCCceee----ecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheee
Confidence            9976652221111    2224456789999999988999999999999999986431 111      1211223467889


Q ss_pred             cCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCC------CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe
Q psy17682        267 NWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEG------SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI  340 (490)
Q Consensus       267 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~  340 (490)
                      +|+|+.|++.-....-.+||+-+..+......|..      ..+.+++|..+.. +++|+   .+-.|++|.+.......
T Consensus       253 ~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~D~~-v~tGS---D~~~i~~WklP~~~ds~  328 (609)
T KOG4227|consen  253 SPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFIDDYT-VATGS---DHWGIHIWKLPRANDSY  328 (609)
T ss_pred             CCCCCeehhhhccCCCEEeeeecccceeEeccCCCCcceeeeeeeeeeeeccee-eeccC---cccceEEEecCCCcccc
Confidence            99999999887777778889887654332223222      1245566665544 78888   47789999875422111


Q ss_pred             ---------------------EEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        341 ---------------------VMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       341 ---------------------~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                                           .....+|.+-+..+.|+|...+| ++.+-.+.++||.-.
T Consensus       329 G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l-~SSGVE~~~KlWS~~  387 (609)
T KOG4227|consen  329 GFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLL-VSSGVENSFKLWSDH  387 (609)
T ss_pred             CccccCcchhhCchhheecceeEEEecccccccceeecCCcceE-eccchhhheeccccc
Confidence                                 01122566678899999998777 777789999999754

>KOG0642|consensus

Probab=99.81  E-value=9.2e-19  Score=160.79  Aligned_cols=257  Identities=16%  Similarity=0.225  Sum_probs=185.4

Q ss_pred             ceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcc-cccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        159 ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGIS-RTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       159 ~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      .++..|.+.|..+.|+|.. ..|++++.||+|++|+++..... .....|+.++.+|.++|.|++..+++. .+++|+.|
T Consensus       288 ~tl~s~~d~ir~l~~~~se-p~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~-~~ysgg~D  365 (577)
T KOG0642|consen  288 FTLRSHDDCIRALAFHPSE-PVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGE-HCYSGGID  365 (577)
T ss_pred             eeeecchhhhhhhhcCCCC-CeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCce-EEEeeccC
Confidence            3778899999999999976 79999999999999999432111 122367888999999999999999996 89999999


Q ss_pred             CcEEEEECCCC----------eeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeec-CCCceeE
Q psy17682        238 NNVAIWNVGTG----------EIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCH-EGSKATR  306 (490)
Q Consensus       238 g~v~iwd~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~  306 (490)
                      |+|+.|++...          .....+.+|.+.|+.+++|+....|++++.||++++|+.....+ .++... .......
T Consensus       366 g~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Pls  444 (577)
T KOG0642|consen  366 GTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLS  444 (577)
T ss_pred             ceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcce
Confidence            99999965421          23456779999999999999999999999999999999887666 333311 1112445


Q ss_pred             EEEeCCC-cEEEEEeCCCceeEEEEecCCCCCCCeEEEecc-----CCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        307 AIYLKSG-LIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD-----TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       307 ~~~s~~~-~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~-----~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      +.+-... ...++..   ..+...++++........+....     ....+..+.++|.+... +++..|+.|+++|..+
T Consensus       445 vd~~ss~~a~~~~s~---~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~-~~~hed~~Ir~~dn~~  520 (577)
T KOG0642|consen  445 VDRTSSRPAHSLASF---RFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADIT-FTAHEDRSIRFFDNKT  520 (577)
T ss_pred             EeeccchhHhhhhhc---ccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCee-EecccCCceecccccc
Confidence            5543332 2222222   23334444444333222221111     11346778889999877 6889999999999999


Q ss_pred             CCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--ceeEEEEecCCC
Q psy17682        381 EPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFRLNNSG  425 (490)
Q Consensus       381 ~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~~~~  425 (490)
                      ++++....   .+...++++++.|+|.++.++.  ..+++|++....
T Consensus       521 ~~~l~s~~---a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~  564 (577)
T KOG0642|consen  521 GKILHSMV---AHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKT  564 (577)
T ss_pred             cccchhee---eccceecceeecCCCceEEeecCCceeehhhccchh
Confidence            98544333   4556899999999999999884  467788887665

>KOG1587|consensus

Probab=99.80  E-value=2.3e-17  Score=159.16  Aligned_cols=278  Identities=16%  Similarity=0.133  Sum_probs=194.8

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK  104 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (490)
                      +.+|+..+-+.|...+. -...|.|++|+|..+.+++.|..+|.|.+||++.+....                       
T Consensus       224 ~~vW~~~~p~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~-----------------------  279 (555)
T KOG1587|consen  224 LLVWSLKNPNTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTP-----------------------  279 (555)
T ss_pred             EEEEecCCCCCceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCC-----------------------
Confidence            44555544444444443 456899999999999999999999999999998765211                       


Q ss_pred             CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCC-CEEEE
Q psy17682        105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDD-NVIAS  183 (490)
Q Consensus       105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~-~~l~s  183 (490)
                                     +                     ..             .......|..+|+.+.|..+-. .-+++
T Consensus       280 ---------------~---------------------s~-------------ls~~~~sh~~~v~~vvW~~~~~~~~f~s  310 (555)
T KOG1587|consen  280 ---------------P---------------------SG-------------LSALEVSHSEPVTAVVWLQNEHNTEFFS  310 (555)
T ss_pred             ---------------C---------------------cc-------------cccccccCCcCeEEEEEeccCCCCceEE
Confidence                           0                     00             0001236899999999976431 45899


Q ss_pred             EeCCCcEEEEECCCCCccccccc--ce---eeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe--------e
Q psy17682        184 GSEDCVVKVWQIPDGGISRTLTE--PV---VDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE--------I  250 (490)
Q Consensus       184 ~~~dg~i~iwd~~~~~~~~~~~~--~~---~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~--------~  250 (490)
                      ++.||.|+.|+++.-........  +.   ..-......+++++|.+...+.++.|+.+|.|.--.....+        .
T Consensus       311 ~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~  390 (555)
T KOG1587|consen  311 LSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKG  390 (555)
T ss_pred             EecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccc
Confidence            99999999998865433111100  00   00011234689999999988899999999998874433221        2


Q ss_pred             EEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEE
Q psy17682        251 MIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPR-TGAIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQY  328 (490)
Q Consensus       251 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i  328 (490)
                      ...+..|.++|+++.++|=+..++..+.|.+++||... ...++..+..+... ++.++|||. ...|+++.   .+|.+
T Consensus       391 ~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~-v~~vaWSptrpavF~~~d---~~G~l  466 (555)
T KOG1587|consen  391 HSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDY-VTDVAWSPTRPAVFATVD---GDGNL  466 (555)
T ss_pred             cccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccce-eeeeEEcCcCceEEEEEc---CCCce
Confidence            33455789999999999977655555559999999988 56666666655544 999999998 45667766   69999


Q ss_pred             EEecCCCCCC-CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        329 SLRAPDHLDE-PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       329 ~iwd~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      .+||+..... |....... ......+.|+++|+.| ++|...|.+.+|++...
T Consensus       467 ~iWDLl~~~~~Pv~s~~~~-~~~l~~~~~s~~g~~l-avGd~~G~~~~~~l~~~  518 (555)
T KOG1587|consen  467 DIWDLLQDDEEPVLSQKVC-SPALTRVRWSPNGKLL-AVGDANGTTHILKLSES  518 (555)
T ss_pred             ehhhhhccccCCccccccc-ccccceeecCCCCcEE-EEecCCCcEEEEEcCch
Confidence            9999986543 33322222 4456778888999998 89999999999999753

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.80  E-value=2.9e-15  Score=146.57  Aligned_cols=344  Identities=18%  Similarity=0.319  Sum_probs=240.7

Q ss_pred             eeeeccCCCCCcEEecccccc-eeeeEEe-ccCCCceEEeeeC-CCeEEEEeCCC-CCCCCCCCccccceeccccceeec
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQR-RVGLVLW-HPTAQNVLLTAGK-EAEPILISLKD-GYIPPSEKSKSALKVTKRSNVLDK  100 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~-~V~~v~~-~p~~~~~l~s~~~-D~~v~iWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~  100 (490)
                      +..|+..........+.++.. .+..+.+ ++++..+++.++. |+.+.+|+... ..                 .....
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----------------~~~~~  151 (466)
T COG2319          89 IKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGK-----------------LIRTL  151 (466)
T ss_pred             EEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEEecCCCe-----------------EEEEE
Confidence            334444444346666777544 7888888 7877435665555 99999999986 22                 01111


Q ss_pred             ccCCCCCcccccCCeeEeccccccceEEEEEeeCC-CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCC
Q psy17682        101 VGGKGGANRNSTANEITISEDYVKEFKEEIRKLKS-QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDN  179 (490)
Q Consensus       101 ~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~-~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~  179 (490)
                      ..      +...+..++++|+..     .+..+.. ++.+.+|+...        ......+.+|...|.+++|+|++..
T Consensus       152 ~~------~~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~  212 (466)
T COG2319         152 EG------HSESVTSLAFSPDGK-----LLASGSSLDGTIKLWDLRT--------GKPLSTLAGHTDPVSSLAFSPDGGL  212 (466)
T ss_pred             ec------CcccEEEEEECCCCC-----EEEecCCCCCceEEEEcCC--------CceEEeeccCCCceEEEEEcCCcce
Confidence            11      222456889998862     4444454 99999999861        3355677789999999999998843


Q ss_pred             EEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee-EEEEecCC
Q psy17682        180 VIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI-MIQIECHP  258 (490)
Q Consensus       180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~-~~~~~~~~  258 (490)
                      .+++++.|+.|++||...+.....      .+.+|.... ...|+|++ .++++++.|+.+++|+++.... +..+..|.
T Consensus       213 ~~~~~~~d~~i~~wd~~~~~~~~~------~~~~~~~~~-~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~  284 (466)
T COG2319         213 LIASGSSDGTIRLWDLSTGKLLRS------TLSGHSDSV-VSSFSPDG-SLLASGSSDGTIRLWDLRSSSSLLRTLSGHS  284 (466)
T ss_pred             EEEEecCCCcEEEEECCCCcEEee------ecCCCCcce-eEeECCCC-CEEEEecCCCcEEEeeecCCCcEEEEEecCC
Confidence            666669999999998875554431      244577665 44899998 4888999999999999986664 44446788


Q ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee--ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC
Q psy17682        259 DIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV--CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL  336 (490)
Q Consensus       259 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~  336 (490)
                      ..+.++.|+|++..+++++.|+.+.+||..+........  .|.. .+..+.+.+++..++.+..  .++.+.+|+....
T Consensus       285 ~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~  361 (466)
T COG2319         285 SSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEG-PVSSLSFSPDGSLLVSGGS--DDGTIRLWDLRTG  361 (466)
T ss_pred             ccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCC-ceEEEEECCCCCEEEEeec--CCCcEEeeecCCC
Confidence            999999999988888889989889999999887666665  5655 4788888433345555521  4688888999876


Q ss_pred             CCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC-CceeeEEEeeCceeEEee--c
Q psy17682        337 DEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP-DPQRGIGMMPKRGCDVNS--C  413 (490)
Q Consensus       337 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~--~  413 (490)
                      .   ..........+..+.+++ ...++..+..++.+.+|+......    ....... ..+....+++++..++.+  .
T Consensus       362 ~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (466)
T COG2319         362 K---PLKTLEGHSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSL----LRNLDGHTSRVTSLDFSPDGKSLASGSSD  433 (466)
T ss_pred             c---eeEEecCCceEEEEEECC-CCCEEEEecCCCceEEEecccCee----eeeccCCCCcEEEEEECCCCcEEEEecCC
Confidence            5   222222222378888988 544422378899999999998762    2222222 688999999999887763  4


Q ss_pred             ceeEEEEecC
Q psy17682        414 EIGRFFRLNN  423 (490)
Q Consensus       414 ~~~~~~~~~~  423 (490)
                      ..+++|....
T Consensus       434 ~~~~~~~~~~  443 (466)
T COG2319         434 NTIRLWDLKT  443 (466)
T ss_pred             CcEEEEeccC
Confidence            5778888877

>KOG1517|consensus

Probab=99.80  E-value=2.3e-17  Score=161.77  Aligned_cols=305  Identities=12%  Similarity=0.174  Sum_probs=207.0

Q ss_pred             ccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecc
Q psy17682         41 LYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISE  120 (490)
Q Consensus        41 ~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  120 (490)
                      .+....-..+.|+|.. ..++++.+.-.|++||++.+..-...                    ..+......|..+.+-.
T Consensus      1061 ~~n~~~pk~~~~hpf~-p~i~~ad~r~~i~vwd~e~~~~l~~F--------------------~n~~~~~t~Vs~l~liN 1119 (1387)
T KOG1517|consen 1061 TGNNQPPKTLKFHPFE-PQIAAADDRERIRVWDWEKGRLLNGF--------------------DNGAFPDTRVSDLELIN 1119 (1387)
T ss_pred             hcCCCCCceeeecCCC-ceeEEcCCcceEEEEecccCceeccc--------------------cCCCCCCCccceeeeec
Confidence            3444456778899988 78887877778999999987621110                    01112233455555533


Q ss_pred             ccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecc----cCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682        121 DYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGH----KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP  196 (490)
Q Consensus       121 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h----~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~  196 (490)
                      +   .-.+.+.+++.||.|+||+-.....+..++-.....+.++    .+.=.-++|....+ +|+++|+-..|+|||..
T Consensus      1120 e---~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G-~Ll~tGd~r~IRIWDa~ 1195 (1387)
T KOG1517|consen 1120 E---QDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSG-HLLVTGDVRSIRIWDAH 1195 (1387)
T ss_pred             c---cchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCC-eEEecCCeeEEEEEecc
Confidence            2   2245788899999999998762221111111111112222    22224457877663 55555557899999998


Q ss_pred             CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe---eEEEEecCCCc--EEEEEEcCCCC
Q psy17682        197 DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE---IMIQIECHPDI--VYSASWNWDGS  271 (490)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~--v~~~~~~~~~~  271 (490)
                      .......+..      +....|+++.-+....+++++|..||.|++||.+...   .+...+.|...  |..+.+.+.|-
T Consensus      1196 ~E~~~~diP~------~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~ 1269 (1387)
T KOG1517|consen 1196 KEQVVADIPY------GSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGL 1269 (1387)
T ss_pred             cceeEeeccc------CCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCC
Confidence            8777666542      2556678777665555799999999999999988543   56677778777  99999998774


Q ss_pred             -EEEEEeCCCeEEEEeCCCCceeeee--eecC--CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe--
Q psy17682        272 -KLLTTCKDKKMRIINPRTGAIEEEA--VCHE--GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE--  344 (490)
Q Consensus       272 -~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~--~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~--  344 (490)
                       .|++|+.+|.|++||+|.......+  ..|.  +...+++..++...++|+|+    .+.|+||++.... ...+..  
T Consensus      1270 ~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs----~q~ikIy~~~G~~-l~~~k~n~ 1344 (1387)
T KOG1517|consen 1270 GELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGS----AQLIKIYSLSGEQ-LNIIKYNP 1344 (1387)
T ss_pred             cceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecC----cceEEEEecChhh-hcccccCc
Confidence             5999999999999999985322222  2332  33489999999999999997    4899999998533 212211  


Q ss_pred             ---ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        345 ---LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       345 ---~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                         ......+.+++|+|-.-.+ ++|+.|.+|.||....++
T Consensus      1345 ~F~~q~~gs~scL~FHP~~~ll-AaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1345 GFMGQRIGSVSCLAFHPHRLLL-AAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred             ccccCcCCCcceeeecchhHhh-hhccCCceEEEeecCCcC
Confidence               1223457999999987777 889999999999887653

>KOG0290|consensus

Probab=99.79  E-value=1.7e-17  Score=140.35  Aligned_cols=249  Identities=18%  Similarity=0.164  Sum_probs=176.5

Q ss_pred             ccccceeeeEEeccCC----CceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         41 LYHQRRVGLVLWHPTA----QNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        41 ~gH~~~V~~v~~~p~~----~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      ..|.-+++.+.|.|+.    +++|||+|+  .+|+|.+...+-..  .....+...++            ......++++
T Consensus        93 fd~~YP~tK~~wiPd~~g~~pdlLATs~D--~LRlWri~~ee~~~--~~~~~L~~~kn------------s~~~aPlTSF  156 (364)
T KOG0290|consen   93 FDHPYPVTKLMWIPDSKGVYPDLLATSSD--FLRLWRIGDEESRV--ELQSVLNNNKN------------SEFCAPLTSF  156 (364)
T ss_pred             CCCCCCccceEecCCccccCcchhhcccC--eEEEEeccCcCCce--ehhhhhccCcc------------cccCCccccc
Confidence            3788999999999976    367888776  89999988532111  00000000000            1112255666


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP  196 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~  196 (490)
                      .|..-.    ...+.+++-|.+-.||+++.     +........+-.|...|..++|...+...+|+.+.||.+|++|++
T Consensus       157 DWne~d----p~~igtSSiDTTCTiWdie~-----~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR  227 (364)
T KOG0290|consen  157 DWNEVD----PNLIGTSSIDTTCTIWDIET-----GVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLR  227 (364)
T ss_pred             ccccCC----cceeEeecccCeEEEEEEee-----ccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEec
Confidence            665432    34678889999999999962     211112335679999999999999888899999999999999997


Q ss_pred             CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC-CcEEEEECCCC-eeEEEEecCCCcEEEEEEcCC-CCEE
Q psy17682        197 DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-NNVAIWNVGTG-EIMIQIECHPDIVYSASWNWD-GSKL  273 (490)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-g~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~-~~~l  273 (490)
                      ..+-...+-+    -.....+...++|+++..+++|+-..| ..|.|.|++.. .++.++++|.+.|+.++|.|. ...|
T Consensus       228 ~leHSTIIYE----~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hi  303 (364)
T KOG0290|consen  228 SLEHSTIIYE----DPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHI  303 (364)
T ss_pred             ccccceEEec----CCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCcee
Confidence            6543221111    111256788999999998888887765 57999999865 578899999999999999995 4799


Q ss_pred             EEEeCCCeEEEEeCCCCce------eeeeeecCCCceeEEEEeCC-CcEEEEEe
Q psy17682        274 LTTCKDKKMRIINPRTGAI------EEEAVCHEGSKATRAIYLKS-GLIFTTGF  320 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~------~~~~~~~~~~~~~~~~~s~~-~~~l~~~~  320 (490)
                      ++++.|..+.+||+.+.-.      +..+.  .+..+..+.|++. +..++.++
T Consensus       304 ctaGDD~qaliWDl~q~~~~~~~dPilay~--a~~EVNqi~Ws~~~~Dwiai~~  355 (364)
T KOG0290|consen  304 CTAGDDCQALIWDLQQMPRENGEDPILAYT--AGGEVNQIQWSSSQPDWIAICF  355 (364)
T ss_pred             eecCCcceEEEEecccccccCCCCchhhhh--ccceeeeeeecccCCCEEEEEe
Confidence            9999999999999975422      22222  2234899999965 77888886

>KOG0644|consensus

Probab=99.79  E-value=2.2e-19  Score=171.56  Aligned_cols=250  Identities=15%  Similarity=0.181  Sum_probs=189.1

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      ++.+.||...|+|+.|...| .++++|+.|..++||..+++.+...       ..||.+.|+.++.+.++ .++++++.|
T Consensus       183 ikrLlgH~naVyca~fDrtg-~~Iitgsdd~lvKiwS~et~~~lAs-------~rGhs~ditdlavs~~n-~~iaaaS~D  253 (1113)
T KOG0644|consen  183 IKRLLGHRNAVYCAIFDRTG-RYIITGSDDRLVKIWSMETARCLAS-------CRGHSGDITDLAVSSNN-TMIAAASND  253 (1113)
T ss_pred             HHHHHhhhhheeeeeecccc-ceEeecCccceeeeeeccchhhhcc-------CCCCccccchhccchhh-hhhhhcccC
Confidence            44577999999999999988 8999999999999999999887665       56799999999999887 489999999


Q ss_pred             CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee--------------eeee------
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIE--------------EEAV------  297 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--------------~~~~------  297 (490)
                      ..|++|.+..+.++..+.+|++.|++++|+|-.    +.+.||++++||.+-...+              ..+.      
T Consensus       254 ~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~  329 (1113)
T KOG0644|consen  254 KVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGD  329 (1113)
T ss_pred             ceEEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeeeecccccc
Confidence            999999999999999999999999999999954    7788999999998811000              0000      


Q ss_pred             ----ec-----CCCceeEEEEeCCCcEEEEEeCCC--------ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCC
Q psy17682        298 ----CH-----EGSKATRAIYLKSGLIFTTGFSKM--------SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDT  360 (490)
Q Consensus       298 ----~~-----~~~~~~~~~~s~~~~~l~~~~~~~--------~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~  360 (490)
                          +.     .....-.++|...+..+++++.+.        .+..+.+|++..+......  ..|...+..+.++|-+
T Consensus       330 ~f~Tgs~d~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l--~ghsd~~yvLd~Hpfn  407 (1113)
T KOG0644|consen  330 RFLTGSRDGEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNL--MGHSDEVYVLDVHPFN  407 (1113)
T ss_pred             ccccccCCcccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhh--cccccceeeeeecCCC
Confidence                00     000112223333333344333111        3556777887766432222  2455678889999998


Q ss_pred             CeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecCCC
Q psy17682        361 NLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSG  425 (490)
Q Consensus       361 ~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~~  425 (490)
                      ..+..+++.||...|||+-.+.|.....   ..+..+..-+||+||..++..++...+|.+.++.
T Consensus       408 ~ri~msag~dgst~iwdi~eg~pik~y~---~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~gq  469 (1113)
T KOG0644|consen  408 PRIAMSAGYDGSTIIWDIWEGIPIKHYF---IGHGKLVDGKFSQDGTSIALSDDHGQLYILGTGQ  469 (1113)
T ss_pred             cHhhhhccCCCceEeeecccCCcceeee---cccceeeccccCCCCceEecCCCCCceEEeccCC
Confidence            8888899999999999999998664444   2345677889999999999999988888887765

>KOG0322|consensus

Probab=99.79  E-value=4.2e-18  Score=142.12  Aligned_cols=295  Identities=14%  Similarity=0.132  Sum_probs=195.6

Q ss_pred             CCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682         33 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST  112 (490)
Q Consensus        33 ~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (490)
                      .+.|...|++|.+.|+++.|-.++  +|.+|..-|.|++|++++.........                      .....
T Consensus         3 pPdP~fvLRp~~~~v~s~~fqa~~--rL~sg~~~G~V~~w~lqt~r~~~~~r~----------------------~g~~~   58 (323)
T KOG0322|consen    3 PPDPFFVLRPHSSSVTSVLFQANE--RLMSGLSVGIVKMWVLQTERDLPLIRL----------------------FGRLF   58 (323)
T ss_pred             CCCCeeEeccccchheehhhccch--hhhcccccceEEEEEeecCccchhhhh----------------------hccce
Confidence            467889999999999999998876  499999999999999998652221000                      01112


Q ss_pred             CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC-cEE
Q psy17682        113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC-VVK  191 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg-~i~  191 (490)
                      +..+..-|.      ..+.+-+.+..+.+|.+.           .-....-|.-.++++-|++..   +...+... ..-
T Consensus        59 it~lq~~p~------d~l~tqgRd~~L~lw~ia-----------~s~~i~i~Si~~nslgFCrfS---l~~~~k~~eqll  118 (323)
T KOG0322|consen   59 ITNLQSIPN------DSLDTQGRDPLLILWTIA-----------YSAFISIHSIVVNSLGFCRFS---LVKKPKNSEQLL  118 (323)
T ss_pred             eeceeecCC------cchhhcCCCceEEEEEcc-----------CcceEEEeeeeccccccccce---eccCCCcchhhe
Confidence            333333332      135567889999999886           355556777778888887632   22222111 111


Q ss_pred             EEECCC---------CCcccccccceeeecccccCEEEEEEeeC-C-CCEEEEEeCCCcEEEEECCCCeeE---------
Q psy17682        192 VWQIPD---------GGISRTLTEPVVDLLYHQRRVGLVLWHPT-A-QNVLLTAGSDNNVAIWNVGTGEIM---------  251 (490)
Q Consensus       192 iwd~~~---------~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~-~~~l~s~~~dg~v~iwd~~~~~~~---------  251 (490)
                      .|+-+.         +...... .+...-.+..+.+.|..+... + ..++++|-++|.|.+||+.++..+         
T Consensus       119 ~yp~rgsde~h~~D~g~~tqv~-i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv  197 (323)
T KOG0322|consen  119 EYPSRGSDETHKQDGGDTTQVQ-IADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKV  197 (323)
T ss_pred             ecCCcccchhhhhccCccceeE-ccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeecccccccc
Confidence            221111         1110000 001112234566777775433 2 235677888999999999987433         


Q ss_pred             -EEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--ce-eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeE
Q psy17682        252 -IQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTG--AI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQ  327 (490)
Q Consensus       252 -~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~-~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~  327 (490)
                       .....|..+|.++.+.+.-..=++|+.+..+..|++...  .+ +.....-.+.-+..+..-||++++|+++   .|+.
T Consensus       198 ~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAG---WD~R  274 (323)
T KOG0322|consen  198 ESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAG---WDHR  274 (323)
T ss_pred             ccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecc---cCCc
Confidence             333468999999999876556677888888999988744  21 1111112222388889999999999998   8999


Q ss_pred             EEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEe
Q psy17682        328 YSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEI  378 (490)
Q Consensus       328 i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~  378 (490)
                      |++|.-++......+.  .|..+|++++|+|+...+ |+++.|++|-+|++
T Consensus       275 iRVyswrtl~pLAVLk--yHsagvn~vAfspd~~lm-AaaskD~rISLWkL  322 (323)
T KOG0322|consen  275 IRVYSWRTLNPLAVLK--YHSAGVNAVAFSPDCELM-AAASKDARISLWKL  322 (323)
T ss_pred             EEEEEeccCCchhhhh--hhhcceeEEEeCCCCchh-hhccCCceEEeeec
Confidence            9999999876443333  355899999999998888 88999999999986

>KOG1310|consensus

Probab=99.79  E-value=2.3e-18  Score=157.53  Aligned_cols=256  Identities=13%  Similarity=0.201  Sum_probs=170.4

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      ....|.||++.|+|++|+.+| .+|+|||+|..+.|||.-.-+.                  ..                
T Consensus        42 lE~eL~GH~GCVN~LeWn~dG-~lL~SGSDD~r~ivWd~~~~Kl------------------lh----------------   86 (758)
T KOG1310|consen   42 LEAELTGHTGCVNCLEWNADG-ELLASGSDDTRLIVWDPFEYKL------------------LH----------------   86 (758)
T ss_pred             hhhhhccccceecceeecCCC-CEEeecCCcceEEeecchhcce------------------ee----------------
Confidence            446799999999999999999 9999999999999999864220                  00                


Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCC-CCCEEEEEeCCCcEEEEE
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPH-DDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~-~~~~l~s~~~dg~i~iwd  194 (490)
                                                                 .+-.||...|.++.|-|. ++.++++|..|..|+++|
T Consensus        87 -------------------------------------------sI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfd  123 (758)
T KOG1310|consen   87 -------------------------------------------SISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFD  123 (758)
T ss_pred             -------------------------------------------eeecccccceeEEeeeccCCCeEEEeccCcceEEEEe
Confidence                                                       012489999999999985 347899999999999999


Q ss_pred             CCCCC---cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeE----------EEEecCCCcE
Q psy17682        195 IPDGG---ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIM----------IQIECHPDIV  261 (490)
Q Consensus       195 ~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~----------~~~~~~~~~v  261 (490)
                      +...+   .-.....+...+..|...|..++-.|++++.+.++++||+++-+|++.....          ..+...--..
T Consensus       124 l~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~liel  203 (758)
T KOG1310|consen  124 LDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIEL  203 (758)
T ss_pred             cccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhhee
Confidence            97422   1122223344456699999999999999999999999999999999863210          1111222446


Q ss_pred             EEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe
Q psy17682        262 YSASWNWD-GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI  340 (490)
Q Consensus       262 ~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~  340 (490)
                      .++..+|. ..+|++|+.|-..++||.+...+  .+....     .+...|.          ..++.++-|.......+.
T Consensus       204 k~ltisp~rp~~laVGgsdpfarLYD~Rr~lk--s~~s~~-----~~~~~pp----------~~~~cv~yf~p~hlkn~~  266 (758)
T KOG1310|consen  204 KCLTISPSRPYYLAVGGSDPFARLYDRRRVLK--SFRSDG-----TMNTCPP----------KDCRCVRYFSPGHLKNSQ  266 (758)
T ss_pred             eeeeecCCCCceEEecCCCchhhhhhhhhhcc--CCCCCc-----cccCCCC----------cccchhheecCccccCcc
Confidence            78999995 46899999999999999753321  111000     0000000          011112222111110000


Q ss_pred             EEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEe
Q psy17682        341 VMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI  388 (490)
Q Consensus       341 ~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~  388 (490)
                      .... .-...++.+.|+|+|..|+++-+ ...|+++|+..++.+....
T Consensus       267 gn~~-~~~~~~t~vtfnpNGtElLvs~~-gEhVYlfdvn~~~~~~~y~  312 (758)
T KOG1310|consen  267 GNLD-RYITCCTYVTFNPNGTELLVSWG-GEHVYLFDVNEDKSPTPYF  312 (758)
T ss_pred             cccc-cceeeeEEEEECCCCcEEEEeeC-CeEEEEEeecCCCCceeec
Confidence            0000 01123678899999999866554 4479999999988654443

>KOG1334|consensus

Probab=99.78  E-value=2.5e-18  Score=155.13  Aligned_cols=305  Identities=15%  Similarity=0.144  Sum_probs=215.8

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      ...|.+|.+.|+.|.|+..| ..|+|||+|..|.+||+..+........                +      +...+...
T Consensus       135 ~~kL~~H~GcVntV~FN~~G-d~l~SgSDD~~vv~WdW~~~~~~l~f~S----------------G------H~~NvfQa  191 (559)
T KOG1334|consen  135 QKKLNKHKGCVNTVHFNQRG-DVLASGSDDLQVVVWDWVSGSPKLSFES----------------G------HCNNVFQA  191 (559)
T ss_pred             hhcccCCCCccceeeecccC-ceeeccCccceEEeehhhccCccccccc----------------c------cccchhhh
Confidence            45689999999999999999 9999999999999999987653221100                1      11112222


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP  196 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~  196 (490)
                      .|-|....   .-++..+.+|.+++-.+.    .++... ....+..|.++|..++.-|+...-|.+++.|+.+.-.|++
T Consensus       192 KFiP~s~d---~ti~~~s~dgqvr~s~i~----~t~~~e-~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr  263 (559)
T KOG1334|consen  192 KFIPFSGD---RTIVTSSRDGQVRVSEIL----ETGYVE-NTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLR  263 (559)
T ss_pred             hccCCCCC---cCceeccccCceeeeeec----ccccee-cceecccccCccceeeecCCCCCcccccccccceeeeeec
Confidence            23222211   235667888888887765    333322 2334568999999999999988999999999999999998


Q ss_pred             CCCcccccccceeeeccccc---CEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe------eEEEEe------cCCCcE
Q psy17682        197 DGGISRTLTEPVVDLLYHQR---RVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE------IMIQIE------CHPDIV  261 (490)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~---~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~------~~~~~~------~~~~~v  261 (490)
                      .+.....+..    -..+..   ....++.+|...+.+++|+.|-.+++||.+.-.      .+..+.      .....|
T Consensus       264 ~~~pa~~~~c----r~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~I  339 (559)
T KOG1334|consen  264 QDVPAEKFVC----READEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNI  339 (559)
T ss_pred             cCCccceeee----eccCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccc
Confidence            7765444331    122333   568899999988899999999999999987422      122222      234569


Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEeCCCCc------------eee-eeeecCCCc-eeEEE-EeCCCcEEEEEeCCCcee
Q psy17682        262 YSASWNWDGSKLLTTCKDKKMRIINPRTGA------------IEE-EAVCHEGSK-ATRAI-YLKSGLIFTTGFSKMSER  326 (490)
Q Consensus       262 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~------------~~~-~~~~~~~~~-~~~~~-~s~~~~~l~~~~~~~~~~  326 (490)
                      ++++|+.++.-|++.-.|-.|+++.-..+.            .+. .+++|.+.. |-.+- |-|...++++|+   ..|
T Consensus       340 Tgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGS---DCG  416 (559)
T KOG1334|consen  340 TGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGS---DCG  416 (559)
T ss_pred             eeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecC---ccc
Confidence            999999888878888888999999543321            122 256776532 33444 568899999998   589


Q ss_pred             EEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        327 QYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       327 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      .|.||+-.+.+.. .+...+. .-|+++.-+|--..| |+++.|..|+||--.+.+
T Consensus       417 hIFiW~K~t~eii-~~MegDr-~VVNCLEpHP~~PvL-AsSGid~DVKIWTP~~~e  469 (559)
T KOG1334|consen  417 HIFIWDKKTGEII-RFMEGDR-HVVNCLEPHPHLPVL-ASSGIDHDVKIWTPLTAE  469 (559)
T ss_pred             eEEEEecchhHHH-HHhhccc-ceEeccCCCCCCchh-hccCCccceeeecCCccc
Confidence            9999998876533 2333233 378999999988888 888899999999885543

>KOG1538|consensus

Probab=99.78  E-value=1e-17  Score=156.66  Aligned_cols=256  Identities=18%  Similarity=0.198  Sum_probs=192.2

Q ss_pred             eeeeeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecc
Q psy17682         22 LFRLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKV  101 (490)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (490)
                      --|+..|++++-+ .+.+|.||.+-|.|++|+.+| .+++||+.|+.|.+|+.+-...                      
T Consensus        32 g~rlliyD~ndG~-llqtLKgHKDtVycVAys~dG-krFASG~aDK~VI~W~~klEG~----------------------   87 (1081)
T KOG1538|consen   32 GSRLLVYDTSDGT-LLQPLKGHKDTVYCVAYAKDG-KRFASGSADKSVIIWTSKLEGI----------------------   87 (1081)
T ss_pred             CCEEEEEeCCCcc-cccccccccceEEEEEEccCC-ceeccCCCceeEEEecccccce----------------------
Confidence            3467888886543 567899999999999999999 9999999999999997654110                      


Q ss_pred             cCCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEE
Q psy17682        102 GGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVI  181 (490)
Q Consensus       102 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l  181 (490)
                                                                                .-..|.+.|-|+.|+|-. ..|
T Consensus        88 ----------------------------------------------------------LkYSH~D~IQCMsFNP~~-h~L  108 (1081)
T KOG1538|consen   88 ----------------------------------------------------------LKYSHNDAIQCMSFNPIT-HQL  108 (1081)
T ss_pred             ----------------------------------------------------------eeeccCCeeeEeecCchH-HHh
Confidence                                                                      013699999999999987 789


Q ss_pred             EEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe---cCC
Q psy17682        182 ASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE---CHP  258 (490)
Q Consensus       182 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---~~~  258 (490)
                      ++++-. ..-+|..+.....+.         ....+|.+++|..||. +++.|-.+|+|.+-+- ++++...++   +..
T Consensus       109 asCsLs-dFglWS~~qK~V~K~---------kss~R~~~CsWtnDGq-ylalG~~nGTIsiRNk-~gEek~~I~Rpgg~N  176 (1081)
T KOG1538|consen  109 ASCSLS-DFGLWSPEQKSVSKH---------KSSSRIICCSWTNDGQ-YLALGMFNGTISIRNK-NGEEKVKIERPGGSN  176 (1081)
T ss_pred             hhcchh-hccccChhhhhHHhh---------hhheeEEEeeecCCCc-EEEEeccCceEEeecC-CCCcceEEeCCCCCC
Confidence            998765 466898655433221         1456789999999996 9999999999999874 454444444   467


Q ss_pred             CcEEEEEEcCCC-----CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecC
Q psy17682        259 DIVYSASWNWDG-----SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAP  333 (490)
Q Consensus       259 ~~v~~~~~~~~~-----~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~  333 (490)
                      ++|.+++|+|..     ..+++.....++.+|.+. |+.+..-+. -+....|+.+-++|.++..|+   .++.+++|..
T Consensus       177 spiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~-L~FdP~CisYf~NGEy~LiGG---sdk~L~~fTR  251 (1081)
T KOG1538|consen  177 SPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRA-LNFDPCCISYFTNGEYILLGG---SDKQLSLFTR  251 (1081)
T ss_pred             CCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeeccccc-CCCCchhheeccCCcEEEEcc---CCCceEEEee
Confidence            889999999953     477788888888888776 333322111 122378899999999999988   6889999865


Q ss_pred             CCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        334 DHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       334 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      +.- ..-.+.  +....|+.+...|+++++ +.|+.||+|-.|++...
T Consensus       252 ~Gv-rLGTvg--~~D~WIWtV~~~PNsQ~v-~~GCqDGTiACyNl~fS  295 (1081)
T KOG1538|consen  252 DGV-RLGTVG--EQDSWIWTVQAKPNSQYV-VVGCQDGTIACYNLIFS  295 (1081)
T ss_pred             cCe-EEeecc--ccceeEEEEEEccCCceE-EEEEccCeeehhhhHHh
Confidence            532 111111  234579999999999998 78999999999988643

>KOG1188|consensus

Probab=99.78  E-value=4.6e-18  Score=147.00  Aligned_cols=205  Identities=13%  Similarity=0.178  Sum_probs=162.4

Q ss_pred             CEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC--CCCEEEEEeCCCeEEEEeCCCCceeeeee--ecCCCce
Q psy17682        229 NVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW--DGSKLLTTCKDKKMRIINPRTGAIEEEAV--CHEGSKA  304 (490)
Q Consensus       229 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~  304 (490)
                      +.++++...|.|++||..+++.+..++++...++.+.|..  ....+.+++.||+|++||+|.......+.  .+.+.+.
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f  120 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF  120 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence            4788888999999999999999999999999999999987  35689999999999999999876554444  4554567


Q ss_pred             eEEEEeCCCcEEEEEeCC-CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682        305 TRAIYLKSGLIFTTGFSK-MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP  383 (490)
Q Consensus       305 ~~~~~s~~~~~l~~~~~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~  383 (490)
                      .+++....++++++|+.. ..+..+.+||.+..+++.....-.|...|+++.|+|....++++|+.||.|.+||+.....
T Consensus       121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~E  200 (376)
T KOG1188|consen  121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNE  200 (376)
T ss_pred             eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcc
Confidence            777777788899988642 2467899999999877555445567788999999999988889999999999999986532


Q ss_pred             eeEEeeeeeCCCceeeEEEeeCc--e-eEEeecceeEEEEecCCCceEEEEEEEe
Q psy17682        384 FVHYINTFQTPDPQRGIGMMPKR--G-CDVNSCEIGRFFRLNNSGLCQVVSMTVP  435 (490)
Q Consensus       384 ~~~~~~~~~~~~~i~~~~~sp~~--~-~l~~~~~~~~~~~~~~~~~~~~i~~~~p  435 (490)
                      --..+..+.+...|..+.|+.++  + +.++-.+...+|++..+.  +...+..|
T Consensus       201 eDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~--~~~~~~~~  253 (376)
T KOG1188|consen  201 EDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGS--EETWLENP  253 (376)
T ss_pred             hhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCC--hhhcccCc
Confidence            22244455666789999999887  4 455668899999999887  44444333

>KOG0771|consensus

Probab=99.78  E-value=4.6e-17  Score=144.89  Aligned_cols=200  Identities=12%  Similarity=0.102  Sum_probs=147.3

Q ss_pred             EEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee-
Q psy17682        219 GLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV-  297 (490)
Q Consensus       219 ~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-  297 (490)
                      .+++|+.+|. .+++|+.||++|||+..+...+.....|...|.++.|+|||++|++.+.| ..+||+++++..+.... 
T Consensus       148 k~vaf~~~gs-~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~  225 (398)
T KOG0771|consen  148 KVVAFNGDGS-KLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTP  225 (398)
T ss_pred             eEEEEcCCCC-EeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCC
Confidence            7899999986 99999999999999987777777777899999999999999999999999 99999999997776665 


Q ss_pred             ecCCCceeEEEEeCCC---cEEEEEeCCCceeEEEEecCCCCCCC---eEEEeccCCCceeeeeecCCCCeEEEEecCCC
Q psy17682        298 CHEGSKATRAIYLKSG---LIFTTGFSKMSERQYSLRAPDHLDEP---IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS  371 (490)
Q Consensus       298 ~~~~~~~~~~~~s~~~---~~l~~~~~~~~~~~i~iwd~~~~~~~---~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg  371 (490)
                      .........+.|+.++   .+++.+.. ...+.|+.|++.....-   ...........|++++.+++|+++ +.|+.||
T Consensus       226 ~~k~~~~~~cRF~~d~~~~~l~laa~~-~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~-AlGT~dG  303 (398)
T KOG0771|consen  226 FSKDEMFSSCRFSVDNAQETLRLAASQ-FPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFL-ALGTMDG  303 (398)
T ss_pred             cccchhhhhceecccCCCceEEEEEec-CCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEE-EEeccCC
Confidence            2233446777788776   22222221 13445555555433221   111222334579999999999999 7899999


Q ss_pred             eEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCC
Q psy17682        372 VIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNS  424 (490)
Q Consensus       372 ~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~  424 (490)
                      .|-|++..+-+..  .+-...|...|+++.|+||.+++++-  +...++..+.-+
T Consensus       304 sVai~~~~~lq~~--~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~vd  356 (398)
T KOG0771|consen  304 SVAIYDAKSLQRL--QYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAVD  356 (398)
T ss_pred             cEEEEEeceeeee--EeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEeec
Confidence            9999999987632  22222355689999999998876654  445566666553

>PF08954 DUF1900: Domain of unknown function (DUF1900); InterPro: IPR015049 This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences

Probab=99.77  E-value=2.5e-18  Score=133.84  Aligned_cols=132  Identities=52%  Similarity=1.010  Sum_probs=89.0

Q ss_pred             EEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEE
Q psy17682        341 VMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFR  420 (490)
Q Consensus       341 ~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~  420 (490)
                      ....++...++...-|.+|.+.|+++|-.|+.|+.|.+...++....+..+....+..+++|-|+..+-+..++..|+++
T Consensus         3 ~~~~lD~s~g~L~P~yD~dt~llyl~gKGD~~ir~yEv~~~~p~l~~l~~~~s~~~~~G~~~lPK~~~dv~~~Ei~R~lk   82 (136)
T PF08954_consen    3 ATQELDTSSGVLMPFYDEDTNLLYLAGKGDGNIRYYEVSDESPYLHYLSEYRSPEPQKGFAFLPKRACDVMKCEIARFLK   82 (136)
T ss_dssp             EEEE----SS-EEEEE-TTT-EEEEEETT-S-EEEEEE-SSTTSEEEEEEE--SS--SEEEE--GGGS-GGGTEEEEEEE
T ss_pred             eEEeccCCCceeEeeEcCCCCEEEEEeccCcEEEEEEEcCCCCceEEccccccCCCeEeeEecCcccCCchheeeeeeee
Confidence            34556677888999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCceEEEEEEEeCC-CcCcccCCCCCCCCCCCccchhhhcCCCCCCCcccC
Q psy17682        421 LNNSGLCQVVSMTVPRK-SELFQDDLYPDTVGDTAALTADEWFAGNELFQDDLY  473 (490)
Q Consensus       421 ~~~~~~~~~i~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  473 (490)
                      +...+ ++|+++.+||| ++.||+|+||++...+|++++++|++|+++.+..++
T Consensus        83 l~~~~-iepisf~VPRk~~~~Fq~DlyP~t~~~~Pa~ta~eW~~G~~~~p~~vS  135 (136)
T PF08954_consen   83 LTNDK-IEPISFIVPRKQSEYFQDDLYPDTRGTEPAMTAEEWLSGKNAEPKLVS  135 (136)
T ss_dssp             EETTE-EEEEEEE------SS--CCC---EE-SS-SB-HHHHHTT------EE-
T ss_pred             ecCCc-EEEEEEEeeccccccccccCCCCCCCCccccCHHHHHCCCCCCCeEec
Confidence            99999 99999999997 899999999999999999999999999999887664

It has no known function []. ; PDB: 2B4E_A 2AQ5_A.

>KOG4227|consensus

Probab=99.76  E-value=4.8e-17  Score=143.01  Aligned_cols=257  Identities=14%  Similarity=0.172  Sum_probs=183.5

Q ss_pred             ceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeec-ccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        159 ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLL-YHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       159 ~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      +-+.+|.+.|+++.|+.++ .+|++|+.|..+++|++...-. ....+|+.... .|.+.|.|++|...+. .+++|+.+
T Consensus        50 KD~~~H~GCiNAlqFS~N~-~~L~SGGDD~~~~~W~~de~~~-~k~~KPI~~~~~~H~SNIF~L~F~~~N~-~~~SG~~~  126 (609)
T KOG4227|consen   50 KDVREHTGCINALQFSHND-RFLASGGDDMHGRVWNVDELMV-RKTPKPIGVMEHPHRSNIFSLEFDLENR-FLYSGERW  126 (609)
T ss_pred             hhhhhhccccceeeeccCC-eEEeecCCcceeeeechHHHHh-hcCCCCceeccCccccceEEEEEccCCe-eEecCCCc
Confidence            3467999999999999986 8999999999999999864321 22223333332 2568999999998874 89999999


Q ss_pred             CcEEEEECCCCeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-eeee-eeecCCCceeEEEEeCC-
Q psy17682        238 NNVAIWNVGTGEIMIQIE--CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGA-IEEE-AVCHEGSKATRAIYLKS-  312 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~-~~~~~~~~~~~~~~s~~-  312 (490)
                      ++|...|+++.+.+..+.  ...+.|+.+..+|..+.|++.+.++.|.+||.+... .... +....+.....+.|+|. 
T Consensus       127 ~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~  206 (609)
T KOG4227|consen  127 GTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPET  206 (609)
T ss_pred             ceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCC
Confidence            999999999998887775  234589999999999999999999999999999765 2222 22334445788899997 


Q ss_pred             CcEEEEEeCCCceeEEEEecCCCCCCCeEEE----eccC-CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEE
Q psy17682        313 GLIFTTGFSKMSERQYSLRAPDHLDEPIVMV----ELDT-SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHY  387 (490)
Q Consensus       313 ~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~----~~~~-~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~  387 (490)
                      ..+|++.+   ..+-+.+||.+....++...    .+.. ...-..+.|+|+|+.+ .+--....-.+||+.+...++-.
T Consensus       207 P~Li~~~~---~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~-msiRR~~~P~~~D~~S~R~~V~k  282 (609)
T KOG4227|consen  207 PALILVNS---ETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQF-MSIRRGKCPLYFDFISQRCFVLK  282 (609)
T ss_pred             ceeEEecc---ccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCee-hhhhccCCCEEeeeecccceeEe
Confidence            56777776   56678899999766543221    1111 1123678899999988 44444455668898886543222


Q ss_pred             ee----eeeCCCceeeEEEeeCceeEEeecc--eeEEEEecC
Q psy17682        388 IN----TFQTPDPQRGIGMMPKRGCDVNSCE--IGRFFRLNN  423 (490)
Q Consensus       388 ~~----~~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~~~~  423 (490)
                      ..    .+.....+.+++|..|.. +++|++  .+.+|++-.
T Consensus       283 ~D~N~~GY~N~~T~KS~~F~~D~~-v~tGSD~~~i~~WklP~  323 (609)
T KOG4227|consen  283 SDHNPNGYCNIKTIKSMTFIDDYT-VATGSDHWGIHIWKLPR  323 (609)
T ss_pred             ccCCCCcceeeeeeeeeeeeccee-eeccCcccceEEEecCC
Confidence            21    111223578888988865 566655  667888754

>KOG1587|consensus

Probab=99.74  E-value=7.6e-16  Score=148.71  Aligned_cols=270  Identities=13%  Similarity=0.167  Sum_probs=186.2

Q ss_pred             ceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeeccccc
Q psy17682        137 QALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQR  216 (490)
Q Consensus       137 g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  216 (490)
                      +.+.+|++.    ...   .....+ .-...|.|++|+|...++++.|..+|.|.+||++.+...... ........|..
T Consensus       222 ~~~~vW~~~----~p~---~Pe~~~-~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s-~ls~~~~sh~~  292 (555)
T KOG1587|consen  222 GVLLVWSLK----NPN---TPELVL-ESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPS-GLSALEVSHSE  292 (555)
T ss_pred             ceEEEEecC----CCC---CceEEE-ecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCc-ccccccccCCc
Confidence            368888886    221   122222 346789999999999899999999999999999877652111 11122345899


Q ss_pred             CEEEEEEeeCCC-CEEEEEeCCCcEEEEECCCCee-EE-----EEe------cCCCcEEEEEEcC-CCCEEEEEeCCCeE
Q psy17682        217 RVGLVLWHPTAQ-NVLLTAGSDNNVAIWNVGTGEI-MI-----QIE------CHPDIVYSASWNW-DGSKLLTTCKDKKM  282 (490)
Q Consensus       217 ~v~~~~~~p~~~-~~l~s~~~dg~v~iwd~~~~~~-~~-----~~~------~~~~~v~~~~~~~-~~~~l~~~~~dg~i  282 (490)
                      +++.+.|..+.. +-+++++.||.|..|+++.-.. ..     ...      .....+++++|.+ +...+++|+.+|.|
T Consensus       293 ~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v  372 (555)
T KOG1587|consen  293 PVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKV  372 (555)
T ss_pred             CeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEE
Confidence            999999976532 3488999999999998874321 11     111      1234688999998 55789999999998


Q ss_pred             EEEeCCCCc--------eeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeee
Q psy17682        283 RIINPRTGA--------IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFP  354 (490)
Q Consensus       283 ~iwd~~~~~--------~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~  354 (490)
                      .--+-...+        ....+..|.+. ++.+.++|=+..+...+   .|.+++||.......|.... ..+...++++
T Consensus       373 ~~~~r~g~~~~~~~~~~~~~~~~~h~g~-v~~v~~nPF~~k~fls~---gDW~vriWs~~~~~~Pl~~~-~~~~~~v~~v  447 (555)
T KOG1587|consen  373 YKGCRKGYTPAPEVSYKGHSTFITHIGP-VYAVSRNPFYPKNFLSV---GDWTVRIWSEDVIASPLLSL-DSSPDYVTDV  447 (555)
T ss_pred             EEEeccCCcccccccccccccccccCcc-eEeeecCCCccceeeee---ccceeEeccccCCCCcchhh-hhccceeeee
Confidence            873322221        12233455554 89999999865443333   38999999988544444332 2344559999


Q ss_pred             eecCCCCeEEEEecCCCeEEEEEecCCC--CeeEEeeeeeCCCceeeEEEeeCceeEEeeccee--EEEEecC
Q psy17682        355 LYDPDTNLVYLCGKGDSVIRYFEITAEP--PFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIG--RFFRLNN  423 (490)
Q Consensus       355 ~~s~~~~~l~~~g~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~--~~~~~~~  423 (490)
                      +|||-..-+|+++..||.|.+||+....  |.....   ......+.+.|++.|++++.|+..+  .+|++..
T Consensus       448 aWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~---~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  448 AWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQK---VCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             EEcCcCceEEEEEcCCCceehhhhhccccCCccccc---ccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence            9999999999999999999999998643  221111   1234568889999999999997644  6777654

>KOG1240|consensus

Probab=99.74  E-value=5.8e-16  Score=154.47  Aligned_cols=276  Identities=14%  Similarity=0.066  Sum_probs=187.7

Q ss_pred             CCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682         33 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST  112 (490)
Q Consensus        33 ~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (490)
                      -...+.+|..|...|..++-++....+|+|||.||+|++|+++.-.-                       . ++.     
T Consensus      1037 ~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~-----------------------~-~~s----- 1087 (1431)
T KOG1240|consen 1037 RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEG-----------------------E-GGS----- 1087 (1431)
T ss_pred             cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhc-----------------------C-cce-----
Confidence            35677889999999999999988779999999999999999886330                       0 000     


Q ss_pred             CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEE
Q psy17682        113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKV  192 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~i  192 (490)
                                                                .+...++..-...+.++...+.+ ..+|.++.||.|++
T Consensus      1088 ------------------------------------------~rS~ltys~~~sr~~~vt~~~~~-~~~Av~t~DG~v~~ 1124 (1431)
T KOG1240|consen 1088 ------------------------------------------ARSELTYSPEGSRVEKVTMCGNG-DQFAVSTKDGSVRV 1124 (1431)
T ss_pred             ------------------------------------------eeeeEEEeccCCceEEEEeccCC-CeEEEEcCCCeEEE
Confidence                                                      00111222235678888888877 88999999999999


Q ss_pred             EECCCCCccccccccee--eecccccCEEEEEEeeCCC-CEEEEEeCCCcEEEEECCCCeeEEEEe--cCCCcEEEEEEc
Q psy17682        193 WQIPDGGISRTLTEPVV--DLLYHQRRVGLVLWHPTAQ-NVLLTAGSDNNVAIWNVGTGEIMIQIE--CHPDIVYSASWN  267 (490)
Q Consensus       193 wd~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~p~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~  267 (490)
                      .+++-....+.......  ........|..-+|..... ..++.+..-+.|..||++......+++  ...+.|++++.+
T Consensus      1125 ~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~id 1204 (1431)
T KOG1240|consen 1125 LRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVID 1204 (1431)
T ss_pred             EEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEec
Confidence            99875322111111011  1111222334444444332 378888888999999999877665554  345779999999


Q ss_pred             CCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC---CcEEEEEeCCCceeEEEEecCCCCCCCeEEEe
Q psy17682        268 WDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS---GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE  344 (490)
Q Consensus       268 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~---~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~  344 (490)
                      |.+..+++|+..|.+.+||+|=+.++.........++..+...|-   ....++++.. ..+.|.+|++.++.+...+..
T Consensus      1205 p~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~-~~nevs~wn~~~g~~~~vl~~ 1283 (1431)
T KOG1240|consen 1205 PWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSS-SNNEVSTWNMETGLRQTVLWA 1283 (1431)
T ss_pred             CCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEeccc-CCCceeeeecccCcceEEEEc
Confidence            999999999999999999999888887776444456777777664   3455555432 477899999998876555443


Q ss_pred             ccC-----------------CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        345 LDT-----------------SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       345 ~~~-----------------~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      ...                 .-......+...+..+ .+|+.|..|+.||.....
T Consensus      1284 s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~-ltggsd~kIR~wD~~~p~ 1337 (1431)
T KOG1240|consen 1284 SDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFL-LTGGSDMKIRKWDPTRPE 1337 (1431)
T ss_pred             CCCCcchhhhcccccCCCCCcccceeeecccCCcee-eecCCccceeeccCCCcc
Confidence            200                 0011122222233344 789999999999998765

>KOG2110|consensus

Probab=99.74  E-value=3.6e-15  Score=130.68  Aligned_cols=240  Identities=12%  Similarity=0.123  Sum_probs=172.6

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC--CcEEE
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD--NNVAI  242 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d--g~v~i  242 (490)
                      ...+..+.|+.+. ..|..|+.|| .++|+.+.......       .......|.-+-|+..   ++|..+.+  +.+++
T Consensus         5 ~~ti~~~~~Nqd~-~~lsvGs~~G-yk~~~~~~~~k~~~-------~~~~~~~IvEmLFSSS---LvaiV~~~qpr~Lkv   72 (391)
T KOG2110|consen    5 KPTINFIGFNQDS-TLLSVGSKDG-YKIFSCSPFEKCFS-------KDTEGVSIVEMLFSSS---LVAIVSIKQPRKLKV   72 (391)
T ss_pred             Ccceeeeeeccce-eEEEccCCCc-eeEEecCchHHhhc-------ccCCCeEEEEeecccc---eeEEEecCCCceEEE
Confidence            4466777799876 7888888887 57888765433111       1113334556666643   56655554  45999


Q ss_pred             EECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCc--eeEEEEeCCCcEEEEEe
Q psy17682        243 WNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSK--ATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       243 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~s~~~~~l~~~~  320 (490)
                      ++.+.+..++.+. ....|.++.++.  +.|+++-.+ .|+|||+++.+++.++..-...+  +..+..++.+.+++.-+
T Consensus        73 ~~~Kk~~~ICe~~-fpt~IL~VrmNr--~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~  148 (391)
T KOG2110|consen   73 VHFKKKTTICEIF-FPTSILAVRMNR--KRLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPG  148 (391)
T ss_pred             EEcccCceEEEEe-cCCceEEEEEcc--ceEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecC
Confidence            9999999998887 577899999974  456666554 49999999999998887442222  44444445566888654


Q ss_pred             CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC-eEEEEEecCCCCeeEEeeeeeCCCceee
Q psy17682        321 SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS-VIRYFEITAEPPFVHYINTFQTPDPQRG  399 (490)
Q Consensus       321 ~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~i~~  399 (490)
                      +. ..|.|.+||..+.+....+.  .|.+.+.+++|+++|.+| |+++..| .||||.+.+++.+.+...... ...|.+
T Consensus       149 s~-t~GdV~l~d~~nl~~v~~I~--aH~~~lAalafs~~G~ll-ATASeKGTVIRVf~v~~G~kl~eFRRG~~-~~~IyS  223 (391)
T KOG2110|consen  149 ST-TSGDVVLFDTINLQPVNTIN--AHKGPLAALAFSPDGTLL-ATASEKGTVIRVFSVPEGQKLYEFRRGTY-PVSIYS  223 (391)
T ss_pred             CC-CCceEEEEEcccceeeeEEE--ecCCceeEEEECCCCCEE-EEeccCceEEEEEEcCCccEeeeeeCCce-eeEEEE
Confidence            33 57899999999866443333  678899999999999999 8998888 568999999985554444333 457899


Q ss_pred             EEEeeCceeEEeec--ceeEEEEecCCC
Q psy17682        400 IGMMPKRGCDVNSC--EIGRFFRLNNSG  425 (490)
Q Consensus       400 ~~~sp~~~~l~~~~--~~~~~~~~~~~~  425 (490)
                      ++|+|++.+|.+++  +++++|+++...
T Consensus       224 L~Fs~ds~~L~~sS~TeTVHiFKL~~~~  251 (391)
T KOG2110|consen  224 LSFSPDSQFLAASSNTETVHIFKLEKVS  251 (391)
T ss_pred             EEECCCCCeEEEecCCCeEEEEEecccc
Confidence            99999999988774  488999998754

>KOG2139|consensus

Probab=99.73  E-value=3.5e-15  Score=130.27  Aligned_cols=270  Identities=16%  Similarity=0.195  Sum_probs=174.7

Q ss_pred             cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCccee-ecccCCeeEEEECCCCCCEEEEEeCCCcE
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALV-GGHKGPVLDIAWSPHDDNVIASGSEDCVV  190 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~~~dg~i  190 (490)
                      .+.-++|++..     -.++.+..|..|++|+-..      +   ....+ ..-...|+|++|-|.+..-|+.|+.. -|
T Consensus       100 dlr~~aWhqH~-----~~fava~nddvVriy~kss------t---~pt~Lks~sQrnvtclawRPlsaselavgCr~-gI  164 (445)
T KOG2139|consen  100 DLRGVAWHQHI-----IAFAVATNDDVVRIYDKSS------T---CPTKLKSVSQRNVTCLAWRPLSASELAVGCRA-GI  164 (445)
T ss_pred             ceeeEeechhh-----hhhhhhccCcEEEEeccCC------C---CCceecchhhcceeEEEeccCCcceeeeeecc-ee
Confidence            46677887753     4567788999999998752      1   11122 23356899999999988888888875 58


Q ss_pred             EEEECCCCCcccc-------cccceeeecccccCEEEEEEeeCCCCEEEEEeC-CCcEEEEECCCCeeEEEEecCCCcEE
Q psy17682        191 KVWQIPDGGISRT-------LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS-DNNVAIWNVGTGEIMIQIECHPDIVY  262 (490)
Q Consensus       191 ~iwd~~~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~v~  262 (490)
                      ++|..........       ....+....+| .+|++++|+++|. .+++++. |..|.|||..++..+.......+.+.
T Consensus       165 ciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt-~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~s  242 (445)
T KOG2139|consen  165 CIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGT-ILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFS  242 (445)
T ss_pred             EEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCC-EEeecccCcceEEEEcCCCCCcccccccCCCcee
Confidence            9998652211110       00112223445 6899999999995 7887775 57899999999886665544567789


Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEeCCC-CceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe-
Q psy17682        263 SASWNWDGSKLLTTCKDKKMRIINPRT-GAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI-  340 (490)
Q Consensus       263 ~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~-  340 (490)
                      -+.||||+.+|++++-|+..++|.... ....+-..+ .+ .+...+|+|+|+.|....    .+.-++|.+.-..+.. 
T Consensus       243 lLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lg-sg-rvqtacWspcGsfLLf~~----sgsp~lysl~f~~~~~~  316 (445)
T KOG2139|consen  243 LLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILG-SG-RVQTACWSPCGSFLLFAC----SGSPRLYSLTFDGEDSV  316 (445)
T ss_pred             eEEEcCCCCEEEEecccceeeeehhcccceecceecc-CC-ceeeeeecCCCCEEEEEE----cCCceEEEEeecCCCcc
Confidence            999999999999999999999996543 333333322 33 599999999999776554    2233333332111110 


Q ss_pred             -----------EEEec------c----CCCceeeeeecCCCCeEEEEecC-C------CeEEEEEecCCCCeeEEeeeee
Q psy17682        341 -----------VMVEL------D----TSNGVMFPLYDPDTNLVYLCGKG-D------SVIRYFEITAEPPFVHYINTFQ  392 (490)
Q Consensus       341 -----------~~~~~------~----~~~~i~~~~~s~~~~~l~~~g~~-d------g~i~iwd~~~~~~~~~~~~~~~  392 (490)
                                 .+..+      .    ..+++.+++|+|.|.+|+++--. +      ..|.+||.+...++.-..-.+.
T Consensus       317 ~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i  396 (445)
T KOG2139|consen  317 FLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMI  396 (445)
T ss_pred             ccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccc
Confidence                       01110      0    13457899999999999554321 1      3466788776654322222333


Q ss_pred             CCCceeeEEEee
Q psy17682        393 TPDPQRGIGMMP  404 (490)
Q Consensus       393 ~~~~i~~~~~sp  404 (490)
                      .+.+-..++|+|
T Consensus       397 ~ge~P~~IsF~p  408 (445)
T KOG2139|consen  397 GGEYPAYISFGP  408 (445)
T ss_pred             cCCCCceEEeee
Confidence            444566677776

>KOG1310|consensus

Probab=99.73  E-value=4.5e-17  Score=149.12  Aligned_cols=249  Identities=18%  Similarity=0.208  Sum_probs=167.6

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCC-CCEEEEEeC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTA-QNVLLTAGS  236 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~~l~s~~~  236 (490)
                      ...+.||++.|+|+.|+.+| .+|++|+.|-.+.|||.-..+.+..+.      .+|...|.++.|-|.. ..++++|..
T Consensus        43 E~eL~GH~GCVN~LeWn~dG-~lL~SGSDD~r~ivWd~~~~KllhsI~------TgHtaNIFsvKFvP~tnnriv~sgAg  115 (758)
T KOG1310|consen   43 EAELTGHTGCVNCLEWNADG-ELLASGSDDTRLIVWDPFEYKLLHSIS------TGHTANIFSVKFVPYTNNRIVLSGAG  115 (758)
T ss_pred             hhhhccccceecceeecCCC-CEEeecCCcceEEeecchhcceeeeee------cccccceeEEeeeccCCCeEEEeccC
Confidence            45678999999999999998 899999999999999998777766654      4699999999999963 347889999


Q ss_pred             CCcEEEEECCC----------CeeEEEEecCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceee-e------eee
Q psy17682        237 DNNVAIWNVGT----------GEIMIQIECHPDIVYSASWNWDG-SKLLTTCKDKKMRIINPRTGAIEE-E------AVC  298 (490)
Q Consensus       237 dg~v~iwd~~~----------~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~-~------~~~  298 (490)
                      |..|+++|+..          .+....+..|...|..++-.|++ ..+.+++.||+|+-+|++....-. .      +..
T Consensus       116 Dk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~n  195 (758)
T KOG1310|consen  116 DKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVN  195 (758)
T ss_pred             cceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHH
Confidence            99999999984          23455567899999999999988 789999999999999999743111 1      100


Q ss_pred             --cCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEE
Q psy17682        299 --HEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRY  375 (490)
Q Consensus       299 --~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~i  375 (490)
                        ..--...++..+|. ..+|++|+   .+-..++||.+....+...      .+.  ..++|-        -.++.|+-
T Consensus       196 y~~~lielk~ltisp~rp~~laVGg---sdpfarLYD~Rr~lks~~s------~~~--~~~~pp--------~~~~cv~y  256 (758)
T KOG1310|consen  196 YNPQLIELKCLTISPSRPYYLAVGG---SDPFARLYDRRRVLKSFRS------DGT--MNTCPP--------KDCRCVRY  256 (758)
T ss_pred             hchhhheeeeeeecCCCCceEEecC---CCchhhhhhhhhhccCCCC------Ccc--ccCCCC--------cccchhhe
Confidence              00112577888887 66888887   7889999997543221111      000  011110        00111222


Q ss_pred             EEecCCCCeeEEeeeeeCCCceeeEEEeeCce-eEEe-ecceeEEEEecCCCceEEEEEEEeC
Q psy17682        376 FEITAEPPFVHYINTFQTPDPQRGIGMMPKRG-CDVN-SCEIGRFFRLNNSGLCQVVSMTVPR  436 (490)
Q Consensus       376 wd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~-~~~~~~~~~~~~~~~~~~i~~~~p~  436 (490)
                      |....-+.....+..  -...++.++|+|+|. +|++ +++.+.++++..++  .|..+..|+
T Consensus       257 f~p~hlkn~~gn~~~--~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~--~~~~y~~~~  315 (758)
T KOG1310|consen  257 FSPGHLKNSQGNLDR--YITCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDK--SPTPYFLPI  315 (758)
T ss_pred             ecCccccCccccccc--ceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCCC--CceeecCcc
Confidence            211110000000000  011367889999984 4443 37788999999887  566565554

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.73  E-value=1.3e-15  Score=148.01  Aligned_cols=235  Identities=14%  Similarity=0.160  Sum_probs=152.1

Q ss_pred             CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCC---CcEEEEECCCCCcccccccceeeec
Q psy17682        136 QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSED---CVVKVWQIPDGGISRTLTEPVVDLL  212 (490)
Q Consensus       136 ~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~  212 (490)
                      +..|.+|+....         ..+.+..|...+.+.+|+|+| +.|+.++.+   ..|++||+.+++.... .    .+.
T Consensus       183 ~~~i~i~d~dg~---------~~~~lt~~~~~v~~p~wSPDG-~~la~~s~~~~~~~i~i~dl~tg~~~~l-~----~~~  247 (429)
T PRK01742        183 PYEVRVADYDGF---------NQFIVNRSSQPLMSPAWSPDG-SKLAYVSFENKKSQLVVHDLRSGARKVV-A----SFR  247 (429)
T ss_pred             eEEEEEECCCCC---------CceEeccCCCccccceEcCCC-CEEEEEEecCCCcEEEEEeCCCCceEEE-e----cCC
Confidence            468888887511         123456788899999999999 666666543   4699999987753221 1    122


Q ss_pred             ccccCEEEEEEeeCCCCEEEE-EeCCCcEEEE--ECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe-CCCeEEEEeCC
Q psy17682        213 YHQRRVGLVLWHPTAQNVLLT-AGSDNNVAIW--NVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KDKKMRIINPR  288 (490)
Q Consensus       213 ~~~~~v~~~~~~p~~~~~l~s-~~~dg~v~iw--d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~  288 (490)
                      +|   ...++|+|+|+ .|+. .+.+|.+.||  |+.+++ ...+..+...+....|+|||+.|+.++ .+|...||++.
T Consensus       248 g~---~~~~~wSPDG~-~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~  322 (429)
T PRK01742        248 GH---NGAPAFSPDGS-RLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMS  322 (429)
T ss_pred             Cc---cCceeECCCCC-EEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEE
Confidence            23   34689999997 5554 4567876555  665555 345555677788999999999777655 56778888765


Q ss_pred             CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEec
Q psy17682        289 TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK  368 (490)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~  368 (490)
                      ..........+..   ....|+|+|+.++..+   .+ .+.+||+.++......   .. .....+.|+|||++| +.++
T Consensus       323 ~~~~~~~~l~~~~---~~~~~SpDG~~ia~~~---~~-~i~~~Dl~~g~~~~lt---~~-~~~~~~~~sPdG~~i-~~~s  390 (429)
T PRK01742        323 ASGGGASLVGGRG---YSAQISADGKTLVMIN---GD-NVVKQDLTSGSTEVLS---ST-FLDESPSISPNGIMI-IYSS  390 (429)
T ss_pred             CCCCCeEEecCCC---CCccCCCCCCEEEEEc---CC-CEEEEECCCCCeEEec---CC-CCCCCceECCCCCEE-EEEE
Confidence            3222122222322   3467999999998876   33 4566898876532211   11 123568899999998 5556


Q ss_pred             CCCeEEEEEec--CCCCeeEEeeeeeCCCceeeEEEeeC
Q psy17682        369 GDSVIRYFEIT--AEPPFVHYINTFQTPDPQRGIGMMPK  405 (490)
Q Consensus       369 ~dg~i~iwd~~--~~~~~~~~~~~~~~~~~i~~~~~sp~  405 (490)
                      .++.+.+|++.  +++ ....+.  .+.+.+..++|+|-
T Consensus       391 ~~g~~~~l~~~~~~G~-~~~~l~--~~~g~~~~p~wsp~  426 (429)
T PRK01742        391 TQGLGKVLQLVSADGR-FKARLP--GSDGQVKFPAWSPY  426 (429)
T ss_pred             cCCCceEEEEEECCCC-ceEEcc--CCCCCCCCcccCCC
Confidence            78888888764  344 222332  23456788999984

>KOG0649|consensus

Probab=99.73  E-value=2.9e-15  Score=123.85  Aligned_cols=243  Identities=13%  Similarity=0.143  Sum_probs=170.2

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC---cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEE
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG---ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAI  242 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~i  242 (490)
                      ..|..-+++|.+ ++|+.|..+|.|-+..+.+--   ....-+.+.....+|.++++.++|+.   .+|++|+ ||.|+=
T Consensus        11 ~tvf~qa~sp~~-~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d---~~Lls~g-dG~V~g   85 (325)
T KOG0649|consen   11 NTVFAQAISPSK-QYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHD---DFLLSGG-DGLVYG   85 (325)
T ss_pred             HHHHHHhhCCcc-eEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeeh---hheeecc-CceEEE
Confidence            356667899988 899999999999999886321   11111233444578999999999993   2677776 499999


Q ss_pred             EECCCCee------EEEEe--cC-----CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEE
Q psy17682        243 WNVGTGEI------MIQIE--CH-----PDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIY  309 (490)
Q Consensus       243 wd~~~~~~------~~~~~--~~-----~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  309 (490)
                      |..+....      +.+.+  .|     --.|++|-..|..+-++.++.|+.++.||+++|+..+++++|... +.++.-
T Consensus        86 w~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDY-vH~vv~  164 (325)
T KOG0649|consen   86 WEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDY-VHSVVG  164 (325)
T ss_pred             eeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcce-eeeeee
Confidence            87654321      11111  11     235889999998777777779999999999999999999999987 777776


Q ss_pred             eCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC------CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682        310 LKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS------NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP  383 (490)
Q Consensus       310 s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~------~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~  383 (490)
                      -.....+.+|+   .||++++||.++.++..++....+.      .+-+-.+..-+..+| ++| ....+.+|+++..+ 
T Consensus       165 R~~~~qilsG~---EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~edWl-vCG-gGp~lslwhLrsse-  238 (325)
T KOG0649|consen  165 RNANGQILSGA---EDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNEDWL-VCG-GGPKLSLWHLRSSE-  238 (325)
T ss_pred             cccCcceeecC---CCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCceE-Eec-CCCceeEEeccCCC-
Confidence            33333455666   7999999999998876655443322      112223444556677 565 45679999999987 


Q ss_pred             eeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecC
Q psy17682        384 FVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNN  423 (490)
Q Consensus       384 ~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~  423 (490)
                         ....+.-+.++..+.|-.|..+++..+..++-|.+..
T Consensus       239 ---~t~vfpipa~v~~v~F~~d~vl~~G~g~~v~~~~l~G  275 (325)
T KOG0649|consen  239 ---STCVFPIPARVHLVDFVDDCVLIGGEGNHVQSYTLNG  275 (325)
T ss_pred             ---ceEEEecccceeEeeeecceEEEeccccceeeeeecc
Confidence               4455566678999999988654433355667777653

>KOG1517|consensus

Probab=99.72  E-value=1.5e-15  Score=149.26  Aligned_cols=290  Identities=14%  Similarity=0.208  Sum_probs=188.4

Q ss_pred             ceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECC-CCCCEEEEEeCCCcEEEEECC-CC----
Q psy17682        125 EFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSP-HDDNVIASGSEDCVVKVWQIP-DG----  198 (490)
Q Consensus       125 ~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p-~~~~~l~s~~~dg~i~iwd~~-~~----  198 (490)
                      .|..+++++.....|.||+.+.     ++.......-..-...|+.+.+-. ++..++++|+.||.|+||+-- +.    
T Consensus      1074 pf~p~i~~ad~r~~i~vwd~e~-----~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~ 1148 (1387)
T KOG1517|consen 1074 PFEPQIAAADDRERIRVWDWEK-----GRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKP 1148 (1387)
T ss_pred             CCCceeEEcCCcceEEEEeccc-----CceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccccccCCc
Confidence            4467788889899999999862     221111111112345788888743 445789999999999999732 21    


Q ss_pred             CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-cCCCcEEEEEEcC-CCCEEEEE
Q psy17682        199 GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNW-DGSKLLTT  276 (490)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~  276 (490)
                      +.+..+..-.....+..+.-.-+.|..... .|+++|.-..|+|||....+.+..+. +....|+++.-+. .|+.|++|
T Consensus      1149 eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G-~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AG 1227 (1387)
T KOG1517|consen 1149 ELVTAWSSLSDQLPGARGTGLVVDWQQQSG-HLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAG 1227 (1387)
T ss_pred             eeEEeeccccccCccCCCCCeeeehhhhCC-eEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEe
Confidence            111111110011111222224567877765 55555567899999999888777765 3344566665443 56999999


Q ss_pred             eCCCeEEEEeCCCCc---eeeeeeecCCC-ceeEEEEeCCCcE-EEEEeCCCceeEEEEecCCCCCCCeEEEeccC---C
Q psy17682        277 CKDKKMRIINPRTGA---IEEEAVCHEGS-KATRAIYLKSGLI-FTTGFSKMSERQYSLRAPDHLDEPIVMVELDT---S  348 (490)
Q Consensus       277 ~~dg~i~iwd~~~~~---~~~~~~~~~~~-~~~~~~~s~~~~~-l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~---~  348 (490)
                      ..||.|++||.|...   .+...+.|... +|..+.+.+.|.- |++|+   .+|.|++||++............+   .
T Consensus      1228 faDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs---~~G~I~~~DlR~~~~e~~~~iv~~~~yG 1304 (1387)
T KOG1517|consen 1228 FADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGS---QDGDIQLLDLRMSSKETFLTIVAHWEYG 1304 (1387)
T ss_pred             ecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeec---cCCeEEEEecccCcccccceeeeccccC
Confidence            999999999998754   34455555542 3788888887654 78888   799999999997422111111111   2


Q ss_pred             CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC-eeEEeeeee--CCCceeeEEEeeCceeEEee--cceeEEEEecC
Q psy17682        349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP-FVHYINTFQ--TPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNN  423 (490)
Q Consensus       349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~-~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~  423 (490)
                      +..+++..+++...+ |+|+. +.|+||++...+. .++.-..+.  ....+.+++|+|-..++++|  +..+.+|....
T Consensus      1305 s~lTal~VH~hapii-AsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k 1382 (1387)
T KOG1517|consen 1305 SALTALTVHEHAPII-ASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEK 1382 (1387)
T ss_pred             ccceeeeeccCCCee-eecCc-ceEEEEecChhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCC
Confidence            248999999999888 89887 9999999986541 111111111  12467999999999888887  44777777655


Q ss_pred             CC
Q psy17682        424 SG  425 (490)
Q Consensus       424 ~~  425 (490)
                      ..
T Consensus      1383 ~~ 1384 (1387)
T KOG1517|consen 1383 PR 1384 (1387)
T ss_pred             cC
Confidence            43

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.71  E-value=1.6e-14  Score=140.95  Aligned_cols=239  Identities=15%  Similarity=0.203  Sum_probs=159.4

Q ss_pred             ceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe---CCCcEEEEECCCCCcccccccceeeecc
Q psy17682        137 QALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS---EDCVVKVWQIPDGGISRTLTEPVVDLLY  213 (490)
Q Consensus       137 g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~  213 (490)
                      ..|.+++..      +   ...+.+..|...+.+.+|+|+| +.|+..+   .+..|.+||+.+++...        +..
T Consensus       182 ~~l~~~d~d------g---~~~~~lt~~~~~v~~p~wSpDG-~~lay~s~~~g~~~i~~~dl~~g~~~~--------l~~  243 (435)
T PRK05137        182 KRLAIMDQD------G---ANVRYLTDGSSLVLTPRFSPNR-QEITYMSYANGRPRVYLLDLETGQREL--------VGN  243 (435)
T ss_pred             eEEEEECCC------C---CCcEEEecCCCCeEeeEECCCC-CEEEEEEecCCCCEEEEEECCCCcEEE--------eec
Confidence            366677654      1   1233456788899999999998 5666554   34689999998775422        223


Q ss_pred             cccCEEEEEEeeCCCCEEEEEeCCCc--EEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC-CC--eEEEEeCC
Q psy17682        214 HQRRVGLVLWHPTAQNVLLTAGSDNN--VAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK-DK--KMRIINPR  288 (490)
Q Consensus       214 ~~~~v~~~~~~p~~~~~l~s~~~dg~--v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~iwd~~  288 (490)
                      +.+.+....|+|+|+.++++.+.++.  |.+||+.+++. ..+..+........|+|||+.|+..+. +|  .|+++|+.
T Consensus       244 ~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~  322 (435)
T PRK05137        244 FPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNAD  322 (435)
T ss_pred             CCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECC
Confidence            55667889999999755567666665  77779887765 445556666778999999998887764 33  68899987


Q ss_pred             CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEec
Q psy17682        289 TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK  368 (490)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~  368 (490)
                      .++... +....+ ......|+|+|+.++....+.....|.+||+..... ..   ......+..+.|+|||+.|++++.
T Consensus       323 g~~~~~-lt~~~~-~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~---lt~~~~~~~p~~spDG~~i~~~~~  396 (435)
T PRK05137        323 GSNPRR-ISFGGG-RYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RI---LTSGFLVEGPTWAPNGRVIMFFRQ  396 (435)
T ss_pred             CCCeEE-eecCCC-cccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-Ee---ccCCCCCCCCeECCCCCEEEEEEc
Confidence            665433 332222 256688999999998776433346788999865432 11   122234678899999999876654


Q ss_pred             CC-----CeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeC
Q psy17682        369 GD-----SVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPK  405 (490)
Q Consensus       369 ~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~  405 (490)
                      ..     ..++++|+..+..  ..+   .....+...+|+|-
T Consensus       397 ~~~~~~~~~L~~~dl~g~~~--~~l---~~~~~~~~p~Wsp~  433 (435)
T PRK05137        397 TPGSGGAPKLYTVDLTGRNE--REV---PTPGDASDPAWSPL  433 (435)
T ss_pred             cCCCCCcceEEEEECCCCce--EEc---cCCCCccCcccCCC
Confidence            33     2577777766542  222   22334677788773

>KOG0771|consensus

Probab=99.71  E-value=1.9e-16  Score=141.04  Aligned_cols=197  Identities=15%  Similarity=0.219  Sum_probs=150.4

Q ss_pred             eEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC
Q psy17682        169 LDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG  248 (490)
Q Consensus       169 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~  248 (490)
                      .+++|+++| ..+++|+.||++|+|+..+...+...       ..|...|.++.|+||++ +|++-+.| ..+||+.+++
T Consensus       148 k~vaf~~~g-s~latgg~dg~lRv~~~Ps~~t~l~e-------~~~~~eV~DL~FS~dgk-~lasig~d-~~~VW~~~~g  217 (398)
T KOG0771|consen  148 KVVAFNGDG-SKLATGGTDGTLRVWEWPSMLTILEE-------IAHHAEVKDLDFSPDGK-FLASIGAD-SARVWSVNTG  217 (398)
T ss_pred             eEEEEcCCC-CEeeeccccceEEEEecCcchhhhhh-------HhhcCccccceeCCCCc-EEEEecCC-ceEEEEeccC
Confidence            789999988 89999999999999998777665543       34999999999999996 89999998 8999999999


Q ss_pred             eeEEEEec--CCCcEEEEEEcCCC---CEEE--EEeCCCeEEEEeCCCCce------eeeeeecCCCceeEEEEeCCCcE
Q psy17682        249 EIMIQIEC--HPDIVYSASWNWDG---SKLL--TTCKDKKMRIINPRTGAI------EEEAVCHEGSKATRAIYLKSGLI  315 (490)
Q Consensus       249 ~~~~~~~~--~~~~v~~~~~~~~~---~~l~--~~~~dg~i~iwd~~~~~~------~~~~~~~~~~~~~~~~~s~~~~~  315 (490)
                      ..+.....  .......+.|+.++   .+++  .....+.|+.||+...+.      .+.+..+.  .+++++.+++|++
T Consensus       218 ~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~--siSsl~VS~dGkf  295 (398)
T KOG0771|consen  218 AALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFK--SISSLAVSDDGKF  295 (398)
T ss_pred             chhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccC--cceeEEEcCCCcE
Confidence            76665542  23345667787766   3332  333456677777654332      11111222  3999999999999


Q ss_pred             EEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        316 FTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       316 l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      ++.|+   .+|.|.|++..+.+....... .|..-|+.+.|+||.+++ ++-+.|..+.|..+.-..
T Consensus       296 ~AlGT---~dGsVai~~~~~lq~~~~vk~-aH~~~VT~ltF~Pdsr~~-~svSs~~~~~v~~l~vd~  357 (398)
T KOG0771|consen  296 LALGT---MDGSVAIYDAKSLQRLQYVKE-AHLGFVTGLTFSPDSRYL-ASVSSDNEAAVTKLAVDK  357 (398)
T ss_pred             EEEec---cCCcEEEEEeceeeeeEeehh-hheeeeeeEEEcCCcCcc-cccccCCceeEEEEeecc
Confidence            99999   799999999988765444433 566689999999999999 778889999998887643

>KOG1963|consensus

Probab=99.71  E-value=1.4e-14  Score=140.45  Aligned_cols=343  Identities=12%  Similarity=0.074  Sum_probs=222.1

Q ss_pred             cccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEec
Q psy17682         40 LLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITIS  119 (490)
Q Consensus        40 l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  119 (490)
                      -..|...++|.++||.+ +++|+|..||.|.+|.--...-..            .......       -+...|++++|+
T Consensus       201 ~~~Htf~~t~~~~spn~-~~~Aa~d~dGrI~vw~d~~~~~~~------------~t~t~lH-------WH~~~V~~L~fS  260 (792)
T KOG1963|consen  201 TVHHTFNITCVALSPNE-RYLAAGDSDGRILVWRDFGSSDDS------------ETCTLLH-------WHHDEVNSLSFS  260 (792)
T ss_pred             hhhhcccceeEEecccc-ceEEEeccCCcEEEEecccccccc------------ccceEEE-------ecccccceeEEe
Confidence            34588889999999999 999999999999999643311000            0000011       123368899999


Q ss_pred             cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682        120 EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG  199 (490)
Q Consensus       120 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~  199 (490)
                      +++     ..+.+++.++.+.+|.++     +++    .+.+..-.++|..+.++||+ .+.+...+|..|.+-...+..
T Consensus       261 ~~G-----~~LlSGG~E~VLv~Wq~~-----T~~----kqfLPRLgs~I~~i~vS~ds-~~~sl~~~DNqI~li~~~dl~  325 (792)
T KOG1963|consen  261 SDG-----AYLLSGGREGVLVLWQLE-----TGK----KQFLPRLGSPILHIVVSPDS-DLYSLVLEDNQIHLIKASDLE  325 (792)
T ss_pred             cCC-----ceEeecccceEEEEEeec-----CCC----cccccccCCeeEEEEEcCCC-CeEEEEecCceEEEEeccchh
Confidence            996     688999999999999996     222    22444557899999999998 778888889999999887766


Q ss_pred             cccccccceee----ecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-----c------CCCcEEEE
Q psy17682        200 ISRTLTEPVVD----LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-----C------HPDIVYSA  264 (490)
Q Consensus       200 ~~~~~~~~~~~----~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-----~------~~~~v~~~  264 (490)
                      ....+......    -....+-.+.++++|.- +.++-.+..|.|.+||+-+.+.+..+.     .      +.-.++.+
T Consensus       326 ~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~-~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav  404 (792)
T KOG1963|consen  326 IKSTISGIKPPTPSTKTRPQSLTTGVSIDPRT-NSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAV  404 (792)
T ss_pred             hhhhccCccCCCccccccccccceeEEEcCCC-CceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeee
Confidence            55544322111    11134556888999954 367788889999999998877665553     1      22346677


Q ss_pred             EEcCCCCEEEEEe--------CCC--eEEEEeCCCCcee----eeee-ecCCCceeEEEEeCCCc-EEEEEeCCCceeEE
Q psy17682        265 SWNWDGSKLLTTC--------KDK--KMRIINPRTGAIE----EEAV-CHEGSKATRAIYLKSGL-IFTTGFSKMSERQY  328 (490)
Q Consensus       265 ~~~~~~~~l~~~~--------~dg--~i~iwd~~~~~~~----~~~~-~~~~~~~~~~~~s~~~~-~l~~~~~~~~~~~i  328 (490)
                      +.+-.|.+++|.-        .||  .+++|-......-    ..+. .|....+..+..++... ..++++   .++.+
T Consensus       405 ~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~---~dg~~  481 (792)
T KOG1963|consen  405 ARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTAS---VDGDF  481 (792)
T ss_pred             hhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEec---cCCeE
Confidence            7777888888864        233  4778866543322    2222 45554333333444433 566666   69999


Q ss_pred             EEecCCCCCC------CeEEEec--cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeE
Q psy17682        329 SLRAPDHLDE------PIVMVEL--DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGI  400 (490)
Q Consensus       329 ~iwd~~~~~~------~~~~~~~--~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~  400 (490)
                      ++|-+...+.      .......  -|...+..++|+.||..| + .+.|++|.+||..+...+......  ...++..+
T Consensus       482 KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGsll-a-~s~~~~Itiwd~~~~~~l~~~~~~--~~~~~~~~  557 (792)
T KOG1963|consen  482 KIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLL-A-VSFDDTITIWDYDTKNELLCTEGS--RNWPIAEL  557 (792)
T ss_pred             EEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCcEE-E-EecCCEEEEecCCChhhhhccccc--cccchHhH
Confidence            9998843221      1111111  256679999999999887 3 457899999999984312111111  11233333


Q ss_pred             EEe----eCceeEEeecceeEEEEecCCC
Q psy17682        401 GMM----PKRGCDVNSCEIGRFFRLNNSG  425 (490)
Q Consensus       401 ~~s----p~~~~l~~~~~~~~~~~~~~~~  425 (490)
                      .|.    .++.+.........+|++....
T Consensus       558 ~~~~~~~~~~~~~~~~~~~l~~WNll~~~  586 (792)
T KOG1963|consen  558 LFTAQTQNDGALVHATQQRLSVWNLLSMS  586 (792)
T ss_pred             hhhcccccccceeeccCceEehHhhhhhh
Confidence            333    3555555556677888877665

>KOG2139|consensus

Probab=99.70  E-value=1.3e-14  Score=126.81  Aligned_cols=289  Identities=16%  Similarity=0.222  Sum_probs=181.9

Q ss_pred             ceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccccc
Q psy17682         45 RRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVK  124 (490)
Q Consensus        45 ~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  124 (490)
                      -.+..++|++.- .-++.+..|-+|++++-..... +               .+.       ....+.+.+++|-|....
T Consensus        99 ~dlr~~aWhqH~-~~fava~nddvVriy~ksst~p-t---------------~Lk-------s~sQrnvtclawRPlsas  154 (445)
T KOG2139|consen   99 IDLRGVAWHQHI-IAFAVATNDDVVRIYDKSSTCP-T---------------KLK-------SVSQRNVTCLAWRPLSAS  154 (445)
T ss_pred             cceeeEeechhh-hhhhhhccCcEEEEeccCCCCC-c---------------eec-------chhhcceeEEEeccCCcc
Confidence            357889999966 7789999999999998776321 1               010       112346889999887622


Q ss_pred             ceEEEEEeeCCCceEEEECCCCCCCCcccCCC----------CcceeecccCCeeEEEECCCCCCEEEEEe-CCCcEEEE
Q psy17682        125 EFKEEIRKLKSQQALSILPPPSTAPNTGRINA----------DHALVGGHKGPVLDIAWSPHDDNVIASGS-EDCVVKVW  193 (490)
Q Consensus       125 ~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~----------~~~~~~~h~~~V~~~~~~p~~~~~l~s~~-~dg~i~iw  193 (490)
                          .++ .+-.+.|.+|..+    .+.....          ++....|| .+|++|+|++|| ..+++++ .|..|+||
T Consensus       155 ----ela-vgCr~gIciW~~s----~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dg-t~l~tAS~gsssi~iW  223 (445)
T KOG2139|consen  155 ----ELA-VGCRAGICIWSDS----RTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDG-TILVTASFGSSSIMIW  223 (445)
T ss_pred             ----eee-eeecceeEEEEcC----cccccccccccccccchhheeCCCC-ceeeEEEEcCCC-CEEeecccCcceEEEE
Confidence                233 3445567888776    2222221          22233456 789999999998 6777765 46789999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  273 (490)
                      |..++..+....       ...+.++-+.|+|+++ .|+++..|+..++|+..............+.|...+|+|+|++|
T Consensus       224 dpdtg~~~pL~~-------~glgg~slLkwSPdgd-~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfL  295 (445)
T KOG2139|consen  224 DPDTGQKIPLIP-------KGLGGFSLLKWSPDGD-VLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFL  295 (445)
T ss_pred             cCCCCCcccccc-------cCCCceeeEEEcCCCC-EEEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEE
Confidence            999988755432       2456789999999996 88889999999999655433222222345589999999999977


Q ss_pred             EEEeCCCeEEEEeCCCCc---------------eeeeee----ecC----CCceeEEEEeCCCcEEEEEeCCCc-----e
Q psy17682        274 LTTCKDKKMRIINPRTGA---------------IEEEAV----CHE----GSKATRAIYLKSGLIFTTGFSKMS-----E  325 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~---------------~~~~~~----~~~----~~~~~~~~~s~~~~~l~~~~~~~~-----~  325 (490)
                      +.... |.-++|.+.-..               ++..+.    ...    .....+++|.|.|.+|++....+.     .
T Consensus       296 Lf~~s-gsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k  374 (445)
T KOG2139|consen  296 LFACS-GSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCK  374 (445)
T ss_pred             EEEEc-CCceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhh
Confidence            66553 444555442110               000000    001    234789999999999998763221     2


Q ss_pred             eEEEEecCCCCCCCeEEE--eccCCCceeeeeecC---CCCeEEEEecCCCeEEEEEec
Q psy17682        326 RQYSLRAPDHLDEPIVMV--ELDTSNGVMFPLYDP---DTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       326 ~~i~iwd~~~~~~~~~~~--~~~~~~~i~~~~~s~---~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      ..|.+||.+.. .+....  .+.....-..+.|+|   ++.+| ..+-.-|.+.-|++.
T Consensus       375 ~~i~~fdtr~s-p~vels~cg~i~ge~P~~IsF~pl~n~g~lL-siaWsTGriq~ypl~  431 (445)
T KOG2139|consen  375 LHISRFDTRKS-PPVELSYCGMIGGEYPAYISFGPLKNEGRLL-SIAWSTGRIQRYPLT  431 (445)
T ss_pred             hhhhhhccccc-CceEEEecccccCCCCceEEeeecccCCcEE-EEEeccCceEeeeeE
Confidence            45677877753 222222  111222234455555   45555 455556777777664

>KOG0644|consensus

Probab=99.70  E-value=1.3e-16  Score=152.84  Aligned_cols=288  Identities=14%  Similarity=0.166  Sum_probs=205.9

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      .+..|.||...|.|+.|.-.| .++++|++|..++||...++....+                  ..+     +...++.
T Consensus       182 ~ikrLlgH~naVyca~fDrtg-~~Iitgsdd~lvKiwS~et~~~lAs------------------~rG-----hs~ditd  237 (1113)
T KOG0644|consen  182 NIKRLLGHRNAVYCAIFDRTG-RYIITGSDDRLVKIWSMETARCLAS------------------CRG-----HSGDITD  237 (1113)
T ss_pred             HHHHHHhhhhheeeeeecccc-ceEeecCccceeeeeeccchhhhcc------------------CCC-----Cccccch
Confidence            344689999999999999999 9999999999999999887653221                  111     2224566


Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI  195 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~  195 (490)
                      ++.+..     ...+++++.|..|++|.+.        ....+..+.||++.|++++|+|--     +.+.||++++||.
T Consensus       238 lavs~~-----n~~iaaaS~D~vIrvWrl~--------~~~pvsvLrghtgavtaiafsP~~-----sss~dgt~~~wd~  299 (1113)
T KOG0644|consen  238 LAVSSN-----NTMIAAASNDKVIRVWRLP--------DGAPVSVLRGHTGAVTAIAFSPRA-----SSSDDGTCRIWDA  299 (1113)
T ss_pred             hccchh-----hhhhhhcccCceEEEEecC--------CCchHHHHhccccceeeeccCccc-----cCCCCCceEeccc
Confidence            666554     3567888999999999985        334677899999999999999932     7789999999998


Q ss_pred             CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCC-CCEEE
Q psy17682        196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWD-GSKLL  274 (490)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~  274 (490)
                      + .........|.. + .....+.++.|...+. .+++++.|+.-..|.+..-.      .+...+.-+..+.+ ..+.+
T Consensus       300 r-~~~~~y~prp~~-~-~~~~~~~s~~~~~~~~-~f~Tgs~d~ea~n~e~~~l~------~~~~~lif~t~ssd~~~~~~  369 (1113)
T KOG0644|consen  300 R-LEPRIYVPRPLK-F-TEKDLVDSILFENNGD-RFLTGSRDGEARNHEFEQLA------WRSNLLIFVTRSSDLSSIVV  369 (1113)
T ss_pred             c-ccccccCCCCCC-c-ccccceeeeecccccc-ccccccCCcccccchhhHhh------hhccceEEEeccccccccce
Confidence            7 111111112211 1 1335677888888875 79999999998888764211      11211212222222 24566


Q ss_pred             EEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEE-EEeCCCceeEEEEecCCCCCCCeEEEeccCCCceee
Q psy17682        275 TTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFT-TGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMF  353 (490)
Q Consensus       275 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~-~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~  353 (490)
                      ++-.+-.+.+|++.++.....+.+|... ...+.++|-+..++ +++   .||...|||+-.+....... .+ +..+..
T Consensus       370 ~ar~~~~~~vwnl~~g~l~H~l~ghsd~-~yvLd~Hpfn~ri~msag---~dgst~iwdi~eg~pik~y~-~g-h~kl~d  443 (1113)
T KOG0644|consen  370 TARNDHRLCVWNLYTGQLLHNLMGHSDE-VYVLDVHPFNPRIAMSAG---YDGSTIIWDIWEGIPIKHYF-IG-HGKLVD  443 (1113)
T ss_pred             eeeeeeEeeeeecccchhhhhhcccccc-eeeeeecCCCcHhhhhcc---CCCceEeeecccCCcceeee-cc-cceeec
Confidence            6677888999999999999988888886 89999999765444 343   79999999998765444433 34 466888


Q ss_pred             eeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        354 PLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       354 ~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      .+||+||..+ +....-|.++|.....++
T Consensus       444 ~kFSqdgts~-~lsd~hgql~i~g~gqs~  471 (1113)
T KOG0644|consen  444 GKFSQDGTSI-ALSDDHGQLYILGTGQSK  471 (1113)
T ss_pred             cccCCCCceE-ecCCCCCceEEeccCCCc
Confidence            8999999998 556666888888776655

>KOG1272|consensus

Probab=99.70  E-value=4.7e-17  Score=146.20  Aligned_cols=230  Identities=12%  Similarity=0.116  Sum_probs=191.4

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG  246 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~  246 (490)
                      .-..+.++.+| .+++.|+.-|.|-.+|..++++...+.        -...|.++.|..+.. ++|++ ....+.||| .
T Consensus       131 GPY~~~ytrnG-rhlllgGrKGHlAa~Dw~t~~L~~Ei~--------v~Etv~Dv~~LHneq-~~AVA-QK~y~yvYD-~  198 (545)
T KOG1272|consen  131 GPYHLDYTRNG-RHLLLGGRKGHLAAFDWVTKKLHFEIN--------VMETVRDVTFLHNEQ-FFAVA-QKKYVYVYD-N  198 (545)
T ss_pred             CCeeeeecCCc-cEEEecCCccceeeeecccceeeeeee--------hhhhhhhhhhhcchH-HHHhh-hhceEEEec-C
Confidence            44578888888 899999999999999999998876654        456789999988864 66665 557899999 4


Q ss_pred             CCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCcee
Q psy17682        247 TGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSER  326 (490)
Q Consensus       247 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~  326 (490)
                      .|..+++++.| ..|..+.|-|..-+|++++..|.++.-|+.+|+.+..+....+. +..+.-.|-+.++-+|.   ..|
T Consensus       199 ~GtElHClk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~-~~vm~qNP~NaVih~Gh---snG  273 (545)
T KOG1272|consen  199 NGTELHCLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGR-TDVMKQNPYNAVIHLGH---SNG  273 (545)
T ss_pred             CCcEEeehhhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCc-cchhhcCCccceEEEcC---CCc
Confidence            68888888854 56999999999999999999999999999999999888755554 78888889899999987   799


Q ss_pred             EEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCc
Q psy17682        327 QYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKR  406 (490)
Q Consensus       327 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~  406 (490)
                      +|.+|.....+...  ....|.++|.++++.++|+|+ +|.+.|..++|||++.-.    .+..+..+.+...++||..|
T Consensus       274 tVSlWSP~skePLv--KiLcH~g~V~siAv~~~G~YM-aTtG~Dr~~kIWDlR~~~----ql~t~~tp~~a~~ls~Sqkg  346 (545)
T KOG1272|consen  274 TVSLWSPNSKEPLV--KILCHRGPVSSIAVDRGGRYM-ATTGLDRKVKIWDLRNFY----QLHTYRTPHPASNLSLSQKG  346 (545)
T ss_pred             eEEecCCCCcchHH--HHHhcCCCcceEEECCCCcEE-eecccccceeEeeecccc----ccceeecCCCcccccccccc
Confidence            99999998755332  334688899999999999999 788899999999999875    33334445688999999999


Q ss_pred             eeEEeecceeEEEE
Q psy17682        407 GCDVNSCEIGRFFR  420 (490)
Q Consensus       407 ~~l~~~~~~~~~~~  420 (490)
                      .+.++-+..+.+|.
T Consensus       347 lLA~~~G~~v~iw~  360 (545)
T KOG1272|consen  347 LLALSYGDHVQIWK  360 (545)
T ss_pred             ceeeecCCeeeeeh
Confidence            88888888999998

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.70  E-value=3.2e-14  Score=138.00  Aligned_cols=238  Identities=14%  Similarity=0.175  Sum_probs=152.0

Q ss_pred             eEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe---CCCcEEEEECCCCCcccccccceeeeccc
Q psy17682        138 ALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS---EDCVVKVWQIPDGGISRTLTEPVVDLLYH  214 (490)
Q Consensus       138 ~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  214 (490)
                      .|.+++.+      +.   ..+.+..+...+.+.+|+|+| +.|+..+   .+..|.+|++.+++.... .       ..
T Consensus       180 ~l~~~d~d------g~---~~~~lt~~~~~~~~p~wSPDG-~~la~~s~~~g~~~i~i~dl~~G~~~~l-~-------~~  241 (429)
T PRK03629        180 ELRVSDYD------GY---NQFVVHRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLANGAVRQV-A-------SF  241 (429)
T ss_pred             eEEEEcCC------CC---CCEEeecCCCceeeeEEcCCC-CEEEEEEecCCCcEEEEEECCCCCeEEc-c-------CC
Confidence            67777764      11   122344567789999999999 5565433   345799999987754221 1       12


Q ss_pred             ccCEEEEEEeeCCCCEEEEEeCCC--cEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC-C--eEEEEeCCC
Q psy17682        215 QRRVGLVLWHPTAQNVLLTAGSDN--NVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD-K--KMRIINPRT  289 (490)
Q Consensus       215 ~~~v~~~~~~p~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g--~i~iwd~~~  289 (490)
                      ...+..+.|+|+|+.++++.+.+|  .|.+||+.+++... +..+...+....|+|||+.|+..+.+ +  .|+++|+.+
T Consensus       242 ~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~  320 (429)
T PRK03629        242 PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNING  320 (429)
T ss_pred             CCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCC
Confidence            333456899999974544545555  58899998876544 44345567889999999988877754 3  466667776


Q ss_pred             CceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecC
Q psy17682        290 GAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKG  369 (490)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~  369 (490)
                      ++.. .+..... ......|+|+|+.++....+.....|.+||+.++.. ..+.   .......+.|+|||+.|++++ .
T Consensus       321 g~~~-~lt~~~~-~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~-~~Lt---~~~~~~~p~~SpDG~~i~~~s-~  393 (429)
T PRK03629        321 GAPQ-RITWEGS-QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLT---DTFLDETPSIAPNGTMVIYSS-S  393 (429)
T ss_pred             CCeE-EeecCCC-CccCEEECCCCCEEEEEEccCCCceEEEEECCCCCe-EEeC---CCCCCCCceECCCCCEEEEEE-c
Confidence            6543 3332222 256788999999988766443456789999987642 1111   122345788999999996555 4


Q ss_pred             CC---eEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeC
Q psy17682        370 DS---VIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPK  405 (490)
Q Consensus       370 dg---~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~  405 (490)
                      ++   .+.++++....  ...+.  .+...+...+|+|-
T Consensus       394 ~~~~~~l~~~~~~G~~--~~~l~--~~~~~~~~p~Wsp~  428 (429)
T PRK03629        394 QGMGSVLNLVSTDGRF--KARLP--ATDGQVKFPAWSPY  428 (429)
T ss_pred             CCCceEEEEEECCCCC--eEECc--cCCCCcCCcccCCC
Confidence            44   36666774433  12232  23456788889873

>KOG1523|consensus

Probab=99.70  E-value=2.4e-15  Score=129.27  Aligned_cols=237  Identities=18%  Similarity=0.208  Sum_probs=174.6

Q ss_pred             cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEE
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVK  191 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~  191 (490)
                      .+.+.+|+++.     ..++.+..+..+.||...     ..+..+...++..|...|++++|+|.. +.|++|+.|..-+
T Consensus        12 pitchAwn~dr-----t~iAv~~~~~evhiy~~~-----~~~~w~~~htls~Hd~~vtgvdWap~s-nrIvtcs~drnay   80 (361)
T KOG1523|consen   12 PITCHAWNSDR-----TQIAVSPNNHEVHIYSML-----GADLWEPAHTLSEHDKIVTGVDWAPKS-NRIVTCSHDRNAY   80 (361)
T ss_pred             ceeeeeecCCC-----ceEEeccCCceEEEEEec-----CCCCceeceehhhhCcceeEEeecCCC-CceeEccCCCCcc
Confidence            68899999985     567778888899999884     444567788999999999999999987 8999999999999


Q ss_pred             EEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEE----EEecCCCcEEEEEEc
Q psy17682        192 VWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMI----QIECHPDIVYSASWN  267 (490)
Q Consensus       192 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~----~~~~~~~~v~~~~~~  267 (490)
                      +|....+..-    .|...+..+....+++.|+|.+ +.|++|+....|.||-++..+--.    .-+.+...|++++|+
T Consensus        81 Vw~~~~~~~W----kptlvLlRiNrAAt~V~WsP~e-nkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWh  155 (361)
T KOG1523|consen   81 VWTQPSGGTW----KPTLVLLRINRAATCVKWSPKE-NKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWH  155 (361)
T ss_pred             ccccCCCCee----ccceeEEEeccceeeEeecCcC-ceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeecc
Confidence            9998544332    2334466699999999999998 699999999999999887654322    123567889999999


Q ss_pred             CCCCEEEEEeCCCeEEEEeCCC------------------CceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEE
Q psy17682        268 WDGSKLLTTCKDKKMRIINPRT------------------GAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYS  329 (490)
Q Consensus       268 ~~~~~l~~~~~dg~i~iwd~~~------------------~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~  329 (490)
                      |++-+|++|+.|+..|++..--                  |+++.++. ..+.-+..+.|+|+|..|+-.+   .|..+.
T Consensus       156 pnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~-~~ggwvh~v~fs~sG~~lawv~---Hds~v~  231 (361)
T KOG1523|consen  156 PNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEAS-SSGGWVHGVLFSPSGNRLAWVG---HDSTVS  231 (361)
T ss_pred             CCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhc-cCCCceeeeEeCCCCCEeeEec---CCCceE
Confidence            9999999999999999987521                  11222232 2334489999999999998877   688899


Q ss_pred             EecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC
Q psy17682        330 LRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS  371 (490)
Q Consensus       330 iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg  371 (490)
                      +-|.....+......... -+..++.|-.+...+  +++.|.
T Consensus       232 ~~da~~p~~~v~~~~~~~-lP~ls~~~ise~~vv--~ag~~c  270 (361)
T KOG1523|consen  232 FVDAAGPSERVQSVATAQ-LPLLSVSWISENSVV--AAGYDC  270 (361)
T ss_pred             EeecCCCchhccchhhcc-CCceeeEeecCCcee--ecCCCC
Confidence            888776543222221122 445555555444333  334443

>KOG0322|consensus

Probab=99.69  E-value=1e-15  Score=127.94  Aligned_cols=247  Identities=15%  Similarity=0.162  Sum_probs=169.5

Q ss_pred             CcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC
Q psy17682        157 DHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS  236 (490)
Q Consensus       157 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~  236 (490)
                      +...+++|.+.|+++.|..++  +|.+|..-|.|++|++.+.+....+..      .+...|+.+.--|++  .+.+-+.
T Consensus         6 P~fvLRp~~~~v~s~~fqa~~--rL~sg~~~G~V~~w~lqt~r~~~~~r~------~g~~~it~lq~~p~d--~l~tqgR   75 (323)
T KOG0322|consen    6 PFFVLRPHSSSVTSVLFQANE--RLMSGLSVGIVKMWVLQTERDLPLIRL------FGRLFITNLQSIPND--SLDTQGR   75 (323)
T ss_pred             CeeEeccccchheehhhccch--hhhcccccceEEEEEeecCccchhhhh------hccceeeceeecCCc--chhhcCC
Confidence            455678999999999999855  699999999999999988866544321      367788999988885  4888889


Q ss_pred             CCcEEEEECCCCeeEE-------------------------EEe----------------------------cCCCcEEE
Q psy17682        237 DNNVAIWNVGTGEIMI-------------------------QIE----------------------------CHPDIVYS  263 (490)
Q Consensus       237 dg~v~iwd~~~~~~~~-------------------------~~~----------------------------~~~~~v~~  263 (490)
                      |..+.+|++..+..+.                         .+.                            +..+.+++
T Consensus        76 d~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc  155 (323)
T KOG0322|consen   76 DPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMC  155 (323)
T ss_pred             CceEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceee
Confidence            9999999875421000                         000                            01123455


Q ss_pred             EEEcC-CCC--EEEEEeCCCeEEEEeCCCCceeeee----------eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEE
Q psy17682        264 ASWNW-DGS--KLLTTCKDKKMRIINPRTGAIEEEA----------VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSL  330 (490)
Q Consensus       264 ~~~~~-~~~--~l~~~~~dg~i~iwd~~~~~~~~~~----------~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~i  330 (490)
                      ..+.- ++.  ++++|-++|.+.+||+.++..+-.+          ..|.. ++.++.+.+.-..=++|+   .+..+..
T Consensus       156 ~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~q-pvlsldyas~~~rGisgg---a~dkl~~  231 (323)
T KOG0322|consen  156 QDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQ-PVLSLDYASSCDRGISGG---ADDKLVM  231 (323)
T ss_pred             eeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccC-cceeeeechhhcCCcCCC---cccccee
Confidence            55332 232  5677889999999999998443333          23444 377777765422222333   5667788


Q ss_pred             ecCCCCC--CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCcee
Q psy17682        331 RAPDHLD--EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGC  408 (490)
Q Consensus       331 wd~~~~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~  408 (490)
                      |++....  .+......-...++..+..-||++.+ |+++.|+.||||+.++..|+ ..+.  .|...|++++|+|+..+
T Consensus       232 ~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIl-ATAGWD~RiRVyswrtl~pL-AVLk--yHsagvn~vAfspd~~l  307 (323)
T KOG0322|consen  232 YSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKIL-ATAGWDHRIRVYSWRTLNPL-AVLK--YHSAGVNAVAFSPDCEL  307 (323)
T ss_pred             eeeccccCcccccceEEecCCCccceEEccCCcEE-eecccCCcEEEEEeccCCch-hhhh--hhhcceeEEEeCCCCch
Confidence            8776532  11111111233578889999999998 89999999999999999854 2333  24478999999999888


Q ss_pred             EEeecc--eeEEEEe
Q psy17682        409 DVNSCE--IGRFFRL  421 (490)
Q Consensus       409 l~~~~~--~~~~~~~  421 (490)
                      +++++.  .+.+|+|
T Consensus       308 mAaaskD~rISLWkL  322 (323)
T KOG0322|consen  308 MAAASKDARISLWKL  322 (323)
T ss_pred             hhhccCCceEEeeec
Confidence            777755  6677876

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.69  E-value=4e-15  Score=144.67  Aligned_cols=171  Identities=18%  Similarity=0.221  Sum_probs=108.5

Q ss_pred             EEEECCCCCCEEEE-EeCCCcEEEE--ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC
Q psy17682        170 DIAWSPHDDNVIAS-GSEDCVVKVW--QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG  246 (490)
Q Consensus       170 ~~~~~p~~~~~l~s-~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~  246 (490)
                      .++|+|+| +.|+. .+.+|.+.||  |+.+++. ..       +..+...+....|+|+|+.+++++..++...||++.
T Consensus       252 ~~~wSPDG-~~La~~~~~~g~~~Iy~~d~~~~~~-~~-------lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~  322 (429)
T PRK01742        252 APAFSPDG-SRLAFASSKDGVLNIYVMGANGGTP-SQ-------LTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMS  322 (429)
T ss_pred             ceeECCCC-CEEEEEEecCCcEEEEEEECCCCCe-Ee-------eccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEE
Confidence            57999999 55555 4578876666  5544432 22       333666788999999997455555567888888765


Q ss_pred             CC-eeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCce
Q psy17682        247 TG-EIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSE  325 (490)
Q Consensus       247 ~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~  325 (490)
                      .. .....+ .+..  ....|+|+|+.|+..+.++ +.+||+.+++........   ....+.|+|+|++++.++.++..
T Consensus       323 ~~~~~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~---~~~~~~~sPdG~~i~~~s~~g~~  395 (429)
T PRK01742        323 ASGGGASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTF---LDESPSISPNGIMIIYSSTQGLG  395 (429)
T ss_pred             CCCCCeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCC---CCCCceECCCCCEEEEEEcCCCc
Confidence            32 222333 3333  4678999999998888765 566999988754322221   13567799999999998844333


Q ss_pred             eEEEEecCCCCCCCeEEEeccCCCceeeeeecCC
Q psy17682        326 RQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPD  359 (490)
Q Consensus       326 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~  359 (490)
                      ..+.+++.. +.....+  ..+...+..++|+|-
T Consensus       396 ~~l~~~~~~-G~~~~~l--~~~~g~~~~p~wsp~  426 (429)
T PRK01742        396 KVLQLVSAD-GRFKARL--PGSDGQVKFPAWSPY  426 (429)
T ss_pred             eEEEEEECC-CCceEEc--cCCCCCCCCcccCCC
Confidence            334444433 2322222  234456788999885

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.68  E-value=4.1e-14  Score=137.91  Aligned_cols=239  Identities=15%  Similarity=0.199  Sum_probs=155.1

Q ss_pred             ceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeC---CCcEEEEECCCCCcccccccceeeecc
Q psy17682        137 QALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSE---DCVVKVWQIPDGGISRTLTEPVVDLLY  213 (490)
Q Consensus       137 g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~  213 (490)
                      ..|.+++...         ...+.+..|...+.+.+|+|+| +.|+..+.   +..|.+||+.+++...        +..
T Consensus       184 ~~l~i~D~~g---------~~~~~lt~~~~~v~~p~wSpDg-~~la~~s~~~~~~~l~~~dl~~g~~~~--------l~~  245 (433)
T PRK04922        184 YALQVADSDG---------YNPQTILRSAEPILSPAWSPDG-KKLAYVSFERGRSAIYVQDLATGQREL--------VAS  245 (433)
T ss_pred             EEEEEECCCC---------CCceEeecCCCccccccCCCCC-CEEEEEecCCCCcEEEEEECCCCCEEE--------ecc
Confidence            3577777641         1223455677889999999998 66666653   3469999998775422        112


Q ss_pred             cccCEEEEEEeeCCCCEEEEEeCCC--cEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC-CCe--EEEEeCC
Q psy17682        214 HQRRVGLVLWHPTAQNVLLTAGSDN--NVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK-DKK--MRIINPR  288 (490)
Q Consensus       214 ~~~~v~~~~~~p~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~--i~iwd~~  288 (490)
                      +.+...++.|+|+|+.++++.+.+|  .|.+||+.+++. ..+..+.......+|+|||+.|+.++. +|.  |+++|+.
T Consensus       246 ~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~  324 (433)
T PRK04922        246 FRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAAS  324 (433)
T ss_pred             CCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECC
Confidence            3344567899999975556666665  599999988764 345545555678899999998887764 444  7777887


Q ss_pred             CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEec
Q psy17682        289 TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK  368 (490)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~  368 (490)
                      +++... +..... ......|+|+|+.++..+.+.....|.+||+.++...    .+.+......+.|+|||++++++..
T Consensus       325 ~g~~~~-lt~~g~-~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~----~Lt~~~~~~~p~~spdG~~i~~~s~  398 (433)
T PRK04922        325 GGSAER-LTFQGN-YNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR----TLTPGSLDESPSFAPNGSMVLYATR  398 (433)
T ss_pred             CCCeEE-eecCCC-CccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE----ECCCCCCCCCceECCCCCEEEEEEe
Confidence            766433 222222 2456899999999887654333457999999775421    2222224567899999999866654


Q ss_pred             CC--CeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee
Q psy17682        369 GD--SVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP  404 (490)
Q Consensus       369 ~d--g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp  404 (490)
                      ..  +.|.++++....  ...+.  ...+.+...+|+|
T Consensus       399 ~~g~~~L~~~~~~g~~--~~~l~--~~~g~~~~p~wsp  432 (433)
T PRK04922        399 EGGRGVLAAVSTDGRV--RQRLV--SADGEVREPAWSP  432 (433)
T ss_pred             cCCceEEEEEECCCCc--eEEcc--cCCCCCCCCccCC
Confidence            43  356666765432  22232  1234567778876

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.68  E-value=2.5e-14  Score=138.90  Aligned_cols=226  Identities=13%  Similarity=0.133  Sum_probs=143.1

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeCC---CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSED---CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS  236 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~  236 (490)
                      .+..+...+.+.+|+|+| +.|+..+.+   ..|.+||+.+++....        ....+.+....|+|+|+.++++.+.
T Consensus       190 ~l~~~~~~v~~p~wSPDG-~~la~~s~~~~~~~I~~~dl~~g~~~~l--------~~~~g~~~~~~~SPDG~~la~~~~~  260 (427)
T PRK02889        190 SALSSPEPIISPAWSPDG-TKLAYVSFESKKPVVYVHDLATGRRRVV--------ANFKGSNSAPAWSPDGRTLAVALSR  260 (427)
T ss_pred             EeccCCCCcccceEcCCC-CEEEEEEccCCCcEEEEEECCCCCEEEe--------ecCCCCccceEECCCCCEEEEEEcc
Confidence            344677889999999999 666655432   4599999988764321        1133456789999999755556777


Q ss_pred             CCcEEEEE--CCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC-CCeEEEE--eCCCCceeeeeeecCCCceeEEEEeC
Q psy17682        237 DNNVAIWN--VGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK-DKKMRII--NPRTGAIEEEAVCHEGSKATRAIYLK  311 (490)
Q Consensus       237 dg~v~iwd--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~s~  311 (490)
                      ++...||.  +..++ ...+..+........|+|||+.|+..+. +|...+|  ++.+++... +..... ......|+|
T Consensus       261 ~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~-lt~~g~-~~~~~~~Sp  337 (427)
T PRK02889        261 DGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQR-VTFTGS-YNTSPRISP  337 (427)
T ss_pred             CCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEE-EecCCC-CcCceEECC
Confidence            88766665  44443 4455545555677899999998886664 4555555  545544322 221222 244678999


Q ss_pred             CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCe--EEEEEecCCCCeeEEee
Q psy17682        312 SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSV--IRYFEITAEPPFVHYIN  389 (490)
Q Consensus       312 ~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~--i~iwd~~~~~~~~~~~~  389 (490)
                      +|++++..+..+....|.+||+.++... .+   ........+.|+|||+.|+++....|.  +.+.++. ++ ....+.
T Consensus       338 DG~~Ia~~s~~~g~~~I~v~d~~~g~~~-~l---t~~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~-g~-~~~~l~  411 (427)
T PRK02889        338 DGKLLAYISRVGGAFKLYVQDLATGQVT-AL---TDTTRDESPSFAPNGRYILYATQQGGRSVLAAVSSD-GR-IKQRLS  411 (427)
T ss_pred             CCCEEEEEEccCCcEEEEEEECCCCCeE-Ec---cCCCCccCceECCCCCEEEEEEecCCCEEEEEEECC-CC-ceEEee
Confidence            9999987764434457999999876421 11   122334678999999999777655554  4444442 32 222222


Q ss_pred             eeeCCCceeeEEEeeC
Q psy17682        390 TFQTPDPQRGIGMMPK  405 (490)
Q Consensus       390 ~~~~~~~i~~~~~sp~  405 (490)
                        ...+.+...+|+|-
T Consensus       412 --~~~g~~~~p~wsp~  425 (427)
T PRK02889        412 --VQGGDVREPSWGPF  425 (427)
T ss_pred             --cCCCCCCCCccCCC
Confidence              12345677888874

>KOG1523|consensus

Probab=99.68  E-value=6.1e-15  Score=126.81  Aligned_cols=238  Identities=16%  Similarity=0.237  Sum_probs=176.3

Q ss_pred             ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEE
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIW  243 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iw  243 (490)
                      -..+|+|.+|++|. ..+|.+.....|.||.....+.-    .+..++..|...|+++.|+|.. +.|++++.|..-++|
T Consensus         9 ~~~pitchAwn~dr-t~iAv~~~~~evhiy~~~~~~~w----~~~htls~Hd~~vtgvdWap~s-nrIvtcs~drnayVw   82 (361)
T KOG1523|consen    9 LLEPITCHAWNSDR-TQIAVSPNNHEVHIYSMLGADLW----EPAHTLSEHDKIVTGVDWAPKS-NRIVTCSHDRNAYVW   82 (361)
T ss_pred             ccCceeeeeecCCC-ceEEeccCCceEEEEEecCCCCc----eeceehhhhCcceeEEeecCCC-CceeEccCCCCcccc
Confidence            35799999999988 89999999999999997766532    3344567799999999999998 489999999999999


Q ss_pred             ECCC-C--eeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee---eeee-ecCCCceeEEEEeCCCcEE
Q psy17682        244 NVGT-G--EIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIE---EEAV-CHEGSKATRAIYLKSGLIF  316 (490)
Q Consensus       244 d~~~-~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~-~~~~~~~~~~~~s~~~~~l  316 (490)
                      .... +  ++...+..+...++++.|+|.++.|++|+..+.|.+|-.+...--   +.++ .+.+ .+.++.|+|++-+|
T Consensus        83 ~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirS-tv~sldWhpnnVLl  161 (361)
T KOG1523|consen   83 TQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRS-TVTSLDWHPNNVLL  161 (361)
T ss_pred             ccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCcccc-ceeeeeccCCccee
Confidence            9843 3  344455568899999999999999999999999999987754321   1122 2233 38999999999999


Q ss_pred             EEEeCCCceeEEEEecC-----CCCCCC--------e--EEEec-cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        317 TTGFSKMSERQYSLRAP-----DHLDEP--------I--VMVEL-DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       317 ~~~~~~~~~~~i~iwd~-----~~~~~~--------~--~~~~~-~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      ++|+   .|+..+++..     +....+        +  ...+. ...+.+..+.|+|+|..| +=.+.|..+.+-|...
T Consensus       162 aaGs---~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~l-awv~Hds~v~~~da~~  237 (361)
T KOG1523|consen  162 AAGS---TDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRL-AWVGHDSTVSFVDAAG  237 (361)
T ss_pred             cccc---cCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEe-eEecCCCceEEeecCC
Confidence            9998   6777776643     221111        0  11112 344569999999999999 5566899999999887


Q ss_pred             CCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc
Q psy17682        381 EPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       381 ~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  414 (490)
                      ..+....+..  ..-|..++.|-.+...++++-+
T Consensus       238 p~~~v~~~~~--~~lP~ls~~~ise~~vv~ag~~  269 (361)
T KOG1523|consen  238 PSERVQSVAT--AQLPLLSVSWISENSVVAAGYD  269 (361)
T ss_pred             Cchhccchhh--ccCCceeeEeecCCceeecCCC
Confidence            6532222222  2257888889888777666644

>KOG1524|consensus

Probab=99.68  E-value=2e-15  Score=138.18  Aligned_cols=237  Identities=15%  Similarity=0.187  Sum_probs=155.4

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeec--ccccCEEEEEEeeCCCCEEEEEeCCCcE
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLL--YHQRRVGLVLWHPTAQNVLLTAGSDNNV  240 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~p~~~~~l~s~~~dg~v  240 (490)
                      .|...|.|+.|+... ..+.++ .|..+.+|.--+.........|...+.  .|-.+ .+..=- .+...|+.++.||.+
T Consensus        12 r~~e~vc~v~w~~~e-ei~~~~-dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~-rs~~~g-~~~d~~~i~s~DGkf   87 (737)
T KOG1524|consen   12 RNSEKVCCVDWSSNE-EIYFVS-DDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGG-RSSGGG-KGSDTLLICSNDGRF   87 (737)
T ss_pred             ccceeEEeecccccc-eEEEec-cCceEEEeecccchhhhhhhCCcccCCccccccc-cccCCC-CCcceEEEEcCCceE
Confidence            567778899998754 445544 555666665443333333222211111  12110 000000 112368888999999


Q ss_pred             EEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEe
Q psy17682        241 AIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       241 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~  320 (490)
                      .+.+ +.++.-..+..|.+.+.+-.|+|+|.-|++++.||.|++|. ++|-...++. .....++|++|.|+..-++.+.
T Consensus        88 ~il~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~-Q~~~~v~c~~W~p~S~~vl~c~  164 (737)
T KOG1524|consen   88 VILN-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVV-QNEESIRCARWAPNSNSIVFCQ  164 (737)
T ss_pred             EEec-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHh-hcCceeEEEEECCCCCceEEec
Confidence            9987 46666777889999999999999999999999999999998 4554444443 3344599999999977666653


Q ss_pred             CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeE
Q psy17682        321 SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGI  400 (490)
Q Consensus       321 ~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~  400 (490)
                          .+.+.|-.+.....+..  -..|.+-|.++.|++..+.+ ++|+.|-..+|||.....    ....-.+..+|+++
T Consensus       165 ----g~h~~IKpL~~n~k~i~--WkAHDGiiL~~~W~~~s~lI-~sgGED~kfKvWD~~G~~----Lf~S~~~ey~ITSv  233 (737)
T KOG1524|consen  165 ----GGHISIKPLAANSKIIR--WRAHDGLVLSLSWSTQSNII-ASGGEDFRFKIWDAQGAN----LFTSAAEEYAITSV  233 (737)
T ss_pred             ----CCeEEEeecccccceeE--EeccCcEEEEeecCccccce-eecCCceeEEeecccCcc----cccCChhccceeee
Confidence                56777766665444333  33577779999999999998 899999999999987543    22333344567777


Q ss_pred             EEeeCceeEEeecceeE
Q psy17682        401 GMMPKRGCDVNSCEIGR  417 (490)
Q Consensus       401 ~~sp~~~~l~~~~~~~~  417 (490)
                      +|.|+..+++-+-...|
T Consensus       234 a~npd~~~~v~S~nt~R  250 (737)
T KOG1524|consen  234 AFNPEKDYLLWSYNTAR  250 (737)
T ss_pred             eeccccceeeeeeeeee
Confidence            77777544444333333

>KOG4497|consensus

Probab=99.67  E-value=3.4e-14  Score=122.62  Aligned_cols=309  Identities=12%  Similarity=0.069  Sum_probs=199.6

Q ss_pred             eEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEE
Q psy17682         49 LVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKE  128 (490)
Q Consensus        49 ~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~  128 (490)
                      -.+|||+| +++|++++- .+.|=|..+-+...      .  ...                ...|.-+.|+.+.    .-
T Consensus        13 ~c~fSp~g-~yiAs~~~y-rlviRd~~tlq~~q------l--f~c----------------ldki~yieW~ads----~~   62 (447)
T KOG4497|consen   13 FCSFSPCG-NYIASLSRY-RLVIRDSETLQLHQ------L--FLC----------------LDKIVYIEWKADS----CH   62 (447)
T ss_pred             ceeECCCC-Ceeeeeeee-EEEEeccchhhHHH------H--HHH----------------HHHhhheeeeccc----ee
Confidence            46799999 999999875 67777766543110      0  000                1123445555443    34


Q ss_pred             EEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccce
Q psy17682        129 EIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPV  208 (490)
Q Consensus       129 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  208 (490)
                      ++.....++.+.+|.+.    +    ..-...+..-..++.+++|+|+|+.+|.+..-|-.|.+|.+.+.+....     
T Consensus        63 ilC~~yk~~~vqvwsl~----Q----pew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~-----  129 (447)
T KOG4497|consen   63 ILCVAYKDPKVQVWSLV----Q----PEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLL-----  129 (447)
T ss_pred             eeeeeeccceEEEEEee----c----ceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEe-----
Confidence            56667788899999986    1    1123344556678999999999978888888899999999987665332     


Q ss_pred             eeecccccCEEEEEEeeCCCCEEEEEeC------------------------------------CCcEEEEECCCCeeEE
Q psy17682        209 VDLLYHQRRVGLVLWHPTAQNVLLTAGS------------------------------------DNNVAIWNVGTGEIMI  252 (490)
Q Consensus       209 ~~~~~~~~~v~~~~~~p~~~~~l~s~~~------------------------------------dg~v~iwd~~~~~~~~  252 (490)
                         ..-+..+..++|+|+|+ +.+.++.                                    +..+.+||---.-.+.
T Consensus       130 ---~~pK~~~kg~~f~~dg~-f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~  205 (447)
T KOG4497|consen  130 ---PHPKTNVKGYAFHPDGQ-FCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVY  205 (447)
T ss_pred             ---cccccCceeEEECCCCc-eeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheee
Confidence               11234568888999986 5554432                                    1223344422111111


Q ss_pred             EEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee-------------------------------------
Q psy17682        253 QIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEE-------------------------------------  295 (490)
Q Consensus       253 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-------------------------------------  295 (490)
                      .+. ..-.+..++|+|.+++|++|+.|+.+|+.+--+.++...                                     
T Consensus       206 aYe-~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~  284 (447)
T KOG4497|consen  206 AYE-RGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDL  284 (447)
T ss_pred             eee-eccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCcc
Confidence            222 235688999999999999999999988855321111000                                     


Q ss_pred             -----------------------eee-----cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccC
Q psy17682        296 -----------------------AVC-----HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDT  347 (490)
Q Consensus       296 -----------------------~~~-----~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~  347 (490)
                                             ++.     .....+..++|++|..++++-.++ .-..+-+||++..+.....   ..
T Consensus       285 ~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~-~PnalW~Wdlq~l~l~avL---iQ  360 (447)
T KOG4497|consen  285 EAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDK-YPNALWLWDLQNLKLHAVL---IQ  360 (447)
T ss_pred             ccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCC-CCceEEEEechhhhhhhhh---hh
Confidence                                   000     001125778999999999988654 4578999999976532222   23


Q ss_pred             CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc
Q psy17682        348 SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       348 ~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  414 (490)
                      ..+|....|+|....|++ +.....+++|......    .+.....+-.|..+.|..+|.+++--++
T Consensus       361 k~piraf~WdP~~prL~v-ctg~srLY~W~psg~~----~V~vP~~GF~i~~l~W~~~g~~i~l~~k  422 (447)
T KOG4497|consen  361 KHPIRAFEWDPGRPRLVV-CTGKSRLYFWAPSGPR----VVGVPKKGFNIQKLQWLQPGEFIVLCGK  422 (447)
T ss_pred             ccceeEEEeCCCCceEEE-EcCCceEEEEcCCCce----EEecCCCCceeeeEEecCCCcEEEEEcC
Confidence            467899999999888844 4445668899887643    3333344467999999999988665544

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.66  E-value=3.3e-13  Score=127.02  Aligned_cols=279  Identities=11%  Similarity=0.088  Sum_probs=171.5

Q ss_pred             EEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccccccee
Q psy17682        130 IRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV  209 (490)
Q Consensus       130 ~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  209 (490)
                      ..+...++.+.+++..        ..+.+..+......-..+.|+||| +++++++.||.|.++|+.+++.+..+.    
T Consensus         9 ~V~~~~~~~v~viD~~--------t~~~~~~i~~~~~~h~~~~~s~Dg-r~~yv~~rdg~vsviD~~~~~~v~~i~----   75 (369)
T PF02239_consen    9 YVVERGSGSVAVIDGA--------TNKVVARIPTGGAPHAGLKFSPDG-RYLYVANRDGTVSVIDLATGKVVATIK----   75 (369)
T ss_dssp             EEEEGGGTEEEEEETT--------T-SEEEEEE-STTEEEEEE-TT-S-SEEEEEETTSEEEEEETTSSSEEEEEE----
T ss_pred             EEEecCCCEEEEEECC--------CCeEEEEEcCCCCceeEEEecCCC-CEEEEEcCCCeEEEEECCcccEEEEEe----
Confidence            4556778999999875        222344454443334457899998 788888999999999999999877654    


Q ss_pred             eecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec-------CCCcEEEEEEcCCCCEEEEEeC-CCe
Q psy17682        210 DLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-------HPDIVYSASWNWDGSKLLTTCK-DKK  281 (490)
Q Consensus       210 ~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~-dg~  281 (490)
                          -.....+++++++|+.++++...++.+.++|.++.+++..+..       ....+..+..+|....++..-. .+.
T Consensus        76 ----~G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~  151 (369)
T PF02239_consen   76 ----VGGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGE  151 (369)
T ss_dssp             -----SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTE
T ss_pred             ----cCCCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCe
Confidence                3445788999999974444555789999999999999888763       2346778888888885655554 588


Q ss_pred             EEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE-------------------
Q psy17682        282 MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM-------------------  342 (490)
Q Consensus       282 i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~-------------------  342 (490)
                      |.+.|....+.+.......+.......|+|++++++++..  ....+.++|..+.......                   
T Consensus       152 I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~--~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~  229 (369)
T PF02239_consen  152 IWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAAN--GSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGF  229 (369)
T ss_dssp             EEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEG--GGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTT
T ss_pred             EEEEEeccccccceeeecccccccccccCcccceeeeccc--ccceeEEEeeccceEEEEeeccccccccccccccCCCc
Confidence            9999988765544333333444888999999998877642  3446666666553211100                   


Q ss_pred             ---------------------------------EeccCCCceeeeeecCCCCeEEEE---ecCCCeEEEEEecCCCCeeE
Q psy17682        343 ---------------------------------VELDTSNGVMFPLYDPDTNLVYLC---GKGDSVIRYFEITAEPPFVH  386 (490)
Q Consensus       343 ---------------------------------~~~~~~~~i~~~~~s~~~~~l~~~---g~~dg~i~iwd~~~~~~~~~  386 (490)
                                                       ..+...++-.-+..+|+++++++.   +...+.|.++|.++.+    
T Consensus       230 g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~----  305 (369)
T PF02239_consen  230 GPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLK----  305 (369)
T ss_dssp             EEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTE----
T ss_pred             ceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCcc----
Confidence                                             000000111334569999999876   5667899999999975    


Q ss_pred             Eeeeee--CCCceeeEEEeeCceeEEee---cc-eeEEEEecCCCceEEEE
Q psy17682        387 YINTFQ--TPDPQRGIGMMPKRGCDVNS---CE-IGRFFRLNNSGLCQVVS  431 (490)
Q Consensus       387 ~~~~~~--~~~~i~~~~~sp~~~~l~~~---~~-~~~~~~~~~~~~~~~i~  431 (490)
                      ....+.  .+..+..+.|+++|..+..+   .+ .+.+|+..+.+++..+.
T Consensus       306 ~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~~i~  356 (369)
T PF02239_consen  306 VVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEKKRIP  356 (369)
T ss_dssp             EEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEEEEEE
T ss_pred             eeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcEEEEEEE
Confidence            222222  22358999999999866554   22 56777777776555554

...

>KOG2111|consensus

Probab=99.65  E-value=6.3e-13  Score=114.53  Aligned_cols=178  Identities=9%  Similarity=0.079  Sum_probs=127.8

Q ss_pred             ceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC-CCCcccccccceeeecccc
Q psy17682        137 QALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP-DGGISRTLTEPVVDLLYHQ  215 (490)
Q Consensus       137 g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~  215 (490)
                      +.+.||+-.        ...++..+ .-..+|.++.+.+   .++++.- .+.|.||... +-+.++.+..     ....
T Consensus        75 NkviIWDD~--------k~~~i~el-~f~~~I~~V~l~r---~riVvvl-~~~I~VytF~~n~k~l~~~et-----~~NP  136 (346)
T KOG2111|consen   75 NKVIIWDDL--------KERCIIEL-SFNSEIKAVKLRR---DRIVVVL-ENKIYVYTFPDNPKLLHVIET-----RSNP  136 (346)
T ss_pred             ceEEEEecc--------cCcEEEEE-EeccceeeEEEcC---CeEEEEe-cCeEEEEEcCCChhheeeeec-----ccCC
Confidence            568889843        11223333 4568999999996   3455554 5689999987 4444443321     1122


Q ss_pred             cCEEEEEEeeCCCCEEEE-EeCCCcEEEEECCCCee--EEEEecCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEeCCCCc
Q psy17682        216 RRVGLVLWHPTAQNVLLT-AGSDNNVAIWNVGTGEI--MIQIECHPDIVYSASWNWDGSKLLTTCKDKK-MRIINPRTGA  291 (490)
Q Consensus       216 ~~v~~~~~~p~~~~~l~s-~~~dg~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~  291 (490)
                      ....+++-+.+.. +||- |-.-|.|.|-|+...+.  ...+.+|.+.|.|++.+.+|..+|++|..|+ |||||..+|+
T Consensus       137 kGlC~~~~~~~k~-~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~  215 (346)
T KOG2111|consen  137 KGLCSLCPTSNKS-LLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGT  215 (346)
T ss_pred             CceEeecCCCCce-EEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCc
Confidence            3333333333322 3333 34469999999986654  4677899999999999999999999999998 8999999999


Q ss_pred             eeeeee-ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC
Q psy17682        292 IEEEAV-CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL  336 (490)
Q Consensus       292 ~~~~~~-~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~  336 (490)
                      .+.+++ +.....+++++|||+..+|++++   ..|+++|+.++..
T Consensus       216 ~l~E~RRG~d~A~iy~iaFSp~~s~LavsS---dKgTlHiF~l~~~  258 (346)
T KOG2111|consen  216 LLQELRRGVDRADIYCIAFSPNSSWLAVSS---DKGTLHIFSLRDT  258 (346)
T ss_pred             EeeeeecCCchheEEEEEeCCCccEEEEEc---CCCeEEEEEeecC
Confidence            999987 44445699999999999999999   4678888887753

>KOG2394|consensus

Probab=99.64  E-value=2.8e-14  Score=130.80  Aligned_cols=145  Identities=14%  Similarity=0.197  Sum_probs=122.5

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCc--------------c-------cccccceeeecccccCEEEEEE
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGI--------------S-------RTLTEPVVDLLYHQRRVGLVLW  223 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~--------------~-------~~~~~~~~~~~~~~~~v~~~~~  223 (490)
                      +..|+|+.|-|.++..++.+-.+|.+.+||......              .       +.-..|...+.--.+.|..++|
T Consensus       219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~F  298 (636)
T KOG2394|consen  219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAF  298 (636)
T ss_pred             ccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeE
Confidence            478999999998888899999999999997631100              0       0001444444445668999999


Q ss_pred             eeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCc
Q psy17682        224 HPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSK  303 (490)
Q Consensus       224 ~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  303 (490)
                      +|||+ +||+.+.||.+||||..+.+.+..++..-+...|++|+|||++|++|++|.-|.||.+...+.+..-.+|.+. 
T Consensus       299 S~DG~-~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSW-  376 (636)
T KOG2394|consen  299 SPDGK-YLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSW-  376 (636)
T ss_pred             cCCCc-eEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccc-
Confidence            99996 9999999999999999999888888877888999999999999999999999999999999999988899987 


Q ss_pred             eeEEEEeC
Q psy17682        304 ATRAIYLK  311 (490)
Q Consensus       304 ~~~~~~s~  311 (490)
                      +..++|.|
T Consensus       377 Vs~VaFDp  384 (636)
T KOG2394|consen  377 VSVVAFDP  384 (636)
T ss_pred             eeeEeecc
Confidence            99999987

>KOG1272|consensus

Probab=99.63  E-value=1.9e-15  Score=136.06  Aligned_cols=271  Identities=14%  Similarity=0.183  Sum_probs=197.2

Q ss_pred             eeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccce
Q psy17682         47 VGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEF  126 (490)
Q Consensus        47 V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~  126 (490)
                      -..+.+..+| ..|+-||.-|+|-.+|+.++.+..+                        .+....|.++.|-..  .  
T Consensus       132 PY~~~ytrnG-rhlllgGrKGHlAa~Dw~t~~L~~E------------------------i~v~Etv~Dv~~LHn--e--  182 (545)
T KOG1272|consen  132 PYHLDYTRNG-RHLLLGGRKGHLAAFDWVTKKLHFE------------------------INVMETVRDVTFLHN--E--  182 (545)
T ss_pred             CeeeeecCCc-cEEEecCCccceeeeecccceeeee------------------------eehhhhhhhhhhhcc--h--
Confidence            3467778888 7888899999999999998764221                        112234555555433  1  


Q ss_pred             EEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccccc
Q psy17682        127 KEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTE  206 (490)
Q Consensus       127 ~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  206 (490)
                        ...+......+.||+-.      |   ..+..++.| ..|..+.|.|.. .+|++++..|.++--|+.+|+.+..+..
T Consensus       183 --q~~AVAQK~y~yvYD~~------G---tElHClk~~-~~v~rLeFLPyH-fLL~~~~~~G~L~Y~DVS~GklVa~~~t  249 (545)
T KOG1272|consen  183 --QFFAVAQKKYVYVYDNN------G---TELHCLKRH-IRVARLEFLPYH-FLLVAASEAGFLKYQDVSTGKLVASIRT  249 (545)
T ss_pred             --HHHHhhhhceEEEecCC------C---cEEeehhhc-Cchhhhcccchh-heeeecccCCceEEEeechhhhhHHHHc
Confidence              23335667778888754      2   233444444 579999999977 8899999999999999999999887653


Q ss_pred             ceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy17682        207 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIIN  286 (490)
Q Consensus       207 ~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd  286 (490)
                             ..+.+..++-+|-+. ++-+|...|+|.+|.....+++..+.+|.++|.++++.++|++++|.+.|..++|||
T Consensus       250 -------~~G~~~vm~qNP~Na-Vih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWD  321 (545)
T KOG1272|consen  250 -------GAGRTDVMKQNPYNA-VIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWD  321 (545)
T ss_pred             -------cCCccchhhcCCccc-eEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEee
Confidence                   667788888999885 899999999999999999999988889999999999999999999999999999999


Q ss_pred             CCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC---CCCeEEEeccCCCceeeeeecCCCCeE
Q psy17682        287 PRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL---DEPIVMVELDTSNGVMFPLYDPDTNLV  363 (490)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~---~~~~~~~~~~~~~~i~~~~~s~~~~~l  363 (490)
                      ++.-..+.++...  .+...+++|..|.+ |.+.    ...+.||.-...   ..............|..+.|.|-...|
T Consensus       322 lR~~~ql~t~~tp--~~a~~ls~SqkglL-A~~~----G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvL  394 (545)
T KOG1272|consen  322 LRNFYQLHTYRTP--HPASNLSLSQKGLL-ALSY----GDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVL  394 (545)
T ss_pred             eccccccceeecC--CCccccccccccce-eeec----CCeeeeehhhhcCCCCCCcchhhhccCcccccceeccHHHee
Confidence            9988877666542  23677888877754 4443    567889853322   111111222223468899999977666


Q ss_pred             EEEecCCCeEEE
Q psy17682        364 YLCGKGDSVIRY  375 (490)
Q Consensus       364 ~~~g~~dg~i~i  375 (490)
                       -.|...|.-.+
T Consensus       395 -GIGH~~G~tsi  405 (545)
T KOG1272|consen  395 -GIGHAGGITSI  405 (545)
T ss_pred             -eccccCCceeE
Confidence             44544443333

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.62  E-value=6.8e-12  Score=118.43  Aligned_cols=283  Identities=13%  Similarity=0.133  Sum_probs=179.0

Q ss_pred             CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeC----CCcEEEEECCCC-Ccccccccceee
Q psy17682        136 QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSE----DCVVKVWQIPDG-GISRTLTEPVVD  210 (490)
Q Consensus       136 ~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~----dg~i~iwd~~~~-~~~~~~~~~~~~  210 (490)
                      .+.|.++.++.   ..+++. ..... .-......++++|++ .+|.+..+    ++.|..|.+... ..+..+..    
T Consensus        12 ~~gI~~~~~d~---~~g~l~-~~~~~-~~~~~Ps~l~~~~~~-~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~----   81 (345)
T PF10282_consen   12 GGGIYVFRFDE---ETGTLT-LVQTV-AEGENPSWLAVSPDG-RRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNS----   81 (345)
T ss_dssp             STEEEEEEEET---TTTEEE-EEEEE-EESSSECCEEE-TTS-SEEEEEETTSSTTTEEEEEEEETTTTEEEEEEE----
T ss_pred             CCcEEEEEEcC---CCCCce-Eeeee-cCCCCCceEEEEeCC-CEEEEEEccccCCCCEEEEEECCCcceeEEeee----
Confidence            46777877731   222221 11121 234556778999988 77777765    579999998764 22222221    


Q ss_pred             ecccccCEEEEEEeeCCCCEEEEEe-CCCcEEEEECCC-CeeEEE---Ee----------cCCCcEEEEEEcCCCCEEEE
Q psy17682        211 LLYHQRRVGLVLWHPTAQNVLLTAG-SDNNVAIWNVGT-GEIMIQ---IE----------CHPDIVYSASWNWDGSKLLT  275 (490)
Q Consensus       211 ~~~~~~~v~~~~~~p~~~~~l~s~~-~dg~v~iwd~~~-~~~~~~---~~----------~~~~~v~~~~~~~~~~~l~~  275 (490)
                      ..........++++|+++ +|+++. .+|.|.++++.. +.....   +.          .......++.++|+++++++
T Consensus        82 ~~~~g~~p~~i~~~~~g~-~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v  160 (345)
T PF10282_consen   82 VPSGGSSPCHIAVDPDGR-FLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYV  160 (345)
T ss_dssp             EEESSSCEEEEEECTTSS-EEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEE
T ss_pred             eccCCCCcEEEEEecCCC-EEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEE
Confidence            222344567899999997 555554 589999999986 433222   21          12345789999999998887


Q ss_pred             Ee-CCCeEEEEeCCCCc--e--eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC-CeEEEecc---
Q psy17682        276 TC-KDKKMRIINPRTGA--I--EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE-PIVMVELD---  346 (490)
Q Consensus       276 ~~-~dg~i~iwd~~~~~--~--~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~-~~~~~~~~---  346 (490)
                      .. ....|++|++....  .  ...+....+.-.+.++|+|+++++.+..+  ..+.|.++++....- ........   
T Consensus       161 ~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e--~s~~v~v~~~~~~~g~~~~~~~~~~~~  238 (345)
T PF10282_consen  161 PDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNE--LSNTVSVFDYDPSDGSLTEIQTISTLP  238 (345)
T ss_dssp             EETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEET--TTTEEEEEEEETTTTEEEEEEEEESCE
T ss_pred             EecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecC--CCCcEEEEeecccCCceeEEEEeeecc
Confidence            65 34679999997665  3  22334455555899999999998877664  477888888873221 11111111   


Q ss_pred             ----CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeC-CCceeeEEEeeCceeEEee---cceeEE
Q psy17682        347 ----TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQT-PDPQRGIGMMPKRGCDVNS---CEIGRF  418 (490)
Q Consensus       347 ----~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~---~~~~~~  418 (490)
                          .......+.++|||++||++...++.|.+|++......+..+..... +...++++++|+|++++++   ++.+.+
T Consensus       239 ~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~v  318 (345)
T PF10282_consen  239 EGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSV  318 (345)
T ss_dssp             TTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEE
T ss_pred             ccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEE
Confidence                11246789999999999999888999999999543222344444443 4558999999999988876   347888


Q ss_pred             EEecC-CCceEEEE
Q psy17682        419 FRLNN-SGLCQVVS  431 (490)
Q Consensus       419 ~~~~~-~~~~~~i~  431 (490)
                      |+++. .+.+....
T Consensus       319 f~~d~~tG~l~~~~  332 (345)
T PF10282_consen  319 FDIDPDTGKLTPVG  332 (345)
T ss_dssp             EEEETTTTEEEEEE
T ss_pred             EEEeCCCCcEEEec
Confidence            88853 23355554

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG4497|consensus

Probab=99.61  E-value=2.9e-13  Score=116.96  Aligned_cols=243  Identities=13%  Similarity=0.191  Sum_probs=164.0

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN  244 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd  244 (490)
                      -+.|.-+.|..+....|.....|+.|.+|++...+-...+.       ....++.+++|+|+|+++|.+...+-.|.+|.
T Consensus        48 ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckId-------eg~agls~~~WSPdgrhiL~tseF~lriTVWS  120 (447)
T KOG4497|consen   48 LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKID-------EGQAGLSSISWSPDGRHILLTSEFDLRITVWS  120 (447)
T ss_pred             HHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEec-------cCCCcceeeeECCCcceEeeeecceeEEEEEE
Confidence            36788889998886677778999999999997665544433       36778999999999988999999999999999


Q ss_pred             CCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC------------------------------------CeEEEEeCC
Q psy17682        245 VGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD------------------------------------KKMRIINPR  288 (490)
Q Consensus       245 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------------------------------g~i~iwd~~  288 (490)
                      +.+.+... ++..+..+..++|+|+|++.+..++-                                    ..+.+||.-
T Consensus       121 L~t~~~~~-~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~  199 (447)
T KOG4497|consen  121 LNTQKGYL-LPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNV  199 (447)
T ss_pred             eccceeEE-ecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecch
Confidence            98776543 33345567889999999987766531                                    123344422


Q ss_pred             CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC-------------------------------
Q psy17682        289 TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD-------------------------------  337 (490)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~-------------------------------  337 (490)
                      -.-.+..+  +.+..+-.+.|+|.++++++|+   .|+.+++.+--+.+                               
T Consensus       200 Leykv~aY--e~~lG~k~v~wsP~~qflavGs---yD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~  274 (447)
T KOG4497|consen  200 LEYKVYAY--ERGLGLKFVEWSPCNQFLAVGS---YDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLH  274 (447)
T ss_pred             hhheeeee--eeccceeEEEeccccceEEeec---cchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcc
Confidence            11111122  2223378889999999999999   57666654321100                               


Q ss_pred             --------------------------CCeEEEec-------cCCCceeeeeecCCCCeEEEEecC--CCeEEEEEecCCC
Q psy17682        338 --------------------------EPIVMVEL-------DTSNGVMFPLYDPDTNLVYLCGKG--DSVIRYFEITAEP  382 (490)
Q Consensus       338 --------------------------~~~~~~~~-------~~~~~i~~~~~s~~~~~l~~~g~~--dg~i~iwd~~~~~  382 (490)
                                                .+..+...       ....++..++|++|..++ ++-..  -+.+.+||++..+
T Consensus       275 ~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~-aTrnd~~PnalW~Wdlq~l~  353 (447)
T KOG4497|consen  275 HCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYA-ATRNDKYPNALWLWDLQNLK  353 (447)
T ss_pred             cccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEE-eeecCCCCceEEEEechhhh
Confidence                                      00000000       112357788999999998 66532  2589999999876


Q ss_pred             CeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecCCC
Q psy17682        383 PFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSG  425 (490)
Q Consensus       383 ~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~~  425 (490)
                          ....+....+|+...|.|...-++.-.+..|+|-.....
T Consensus       354 ----l~avLiQk~piraf~WdP~~prL~vctg~srLY~W~psg  392 (447)
T KOG4497|consen  354 ----LHAVLIQKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSG  392 (447)
T ss_pred             ----hhhhhhhccceeEEEeCCCCceEEEEcCCceEEEEcCCC
Confidence                333344556999999999986666555544666655544

>KOG3881|consensus

Probab=99.60  E-value=2.3e-13  Score=120.32  Aligned_cols=263  Identities=11%  Similarity=0.088  Sum_probs=186.4

Q ss_pred             cccccceeeeEEeccCCC-ceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEe
Q psy17682         40 LLYHQRRVGLVLWHPTAQ-NVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITI  118 (490)
Q Consensus        40 l~gH~~~V~~v~~~p~~~-~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  118 (490)
                      ..+-...|..++|.-+++ ..|+.++.|..+.........+..+.....           . .     ......|..+  
T Consensus        51 ~~~~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~-----------~-~-----~l~~~~I~gl--  111 (412)
T KOG3881|consen   51 GVDELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAK-----------T-V-----SLGTKSIKGL--  111 (412)
T ss_pred             ccchhhhhhhheeecCCceeEeeccccCcccccccccCCcccccccccc-----------c-c-----ccccccccch--
Confidence            445667889999987665 456666577788887777665433210000           0 0     0001112222  


Q ss_pred             ccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCC--CcEEEEECC
Q psy17682        119 SEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSED--CVVKVWQIP  196 (490)
Q Consensus       119 s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~d--g~i~iwd~~  196 (490)
                           ......+.++..+|.+.+|.........    .....+..| ..+..|.-++..+.++++|+..  ..+.+||++
T Consensus       112 -----~~~dg~Litc~~sG~l~~~~~k~~d~hs----s~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle  181 (412)
T KOG3881|consen  112 -----KLADGTLITCVSSGNLQVRHDKSGDLHS----SKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLE  181 (412)
T ss_pred             -----hhcCCEEEEEecCCcEEEEeccCCcccc----ccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecc
Confidence                 2223467777899999999886322211    122233333 5677777787777888889999  889999999


Q ss_pred             CCCcccccccceeeecccc--cCEEEEEEeeC--CCCEEEEEeCCCcEEEEECCCC-eeEEEEecCCCcEEEEEEcCCCC
Q psy17682        197 DGGISRTLTEPVVDLLYHQ--RRVGLVLWHPT--AQNVLLTAGSDNNVAIWNVGTG-EIMIQIECHPDIVYSASWNWDGS  271 (490)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~--~~v~~~~~~p~--~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~  271 (490)
                      ..+.+..-.++.....+-.  -.++++.|-+.  . +.|++++.-+.+++||.+.+ .++.++.-...+++++...|.++
T Consensus       182 ~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~-~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn  260 (412)
T KOG3881|consen  182 QSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPN-YKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGN  260 (412)
T ss_pred             cceeeeeccCCCCccccceeeeeeccceecCCCCC-ceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCc
Confidence            8865554433222222222  24578888776  4 58999999999999999865 57888887788999999999999


Q ss_pred             EEEEEeCCCeEEEEeCCCCceeee-eeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC
Q psy17682        272 KLLTTCKDKKMRIINPRTGAIEEE-AVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL  336 (490)
Q Consensus       272 ~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~  336 (490)
                      ++++|..-|.+..||++.++.... +.+-.++ ++++..+|.+.++++++   -|+.++|+|+.+.
T Consensus       261 ~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGs-irsih~hp~~~~las~G---LDRyvRIhD~ktr  322 (412)
T KOG3881|consen  261 FIYTGNTKGQLAKFDLRGGKLLGCGLKGITGS-IRSIHCHPTHPVLASCG---LDRYVRIHDIKTR  322 (412)
T ss_pred             EEEEecccchhheecccCceeeccccCCccCC-cceEEEcCCCceEEeec---cceeEEEeecccc
Confidence            999999999999999999988776 6666665 99999999999999998   8999999999983

>KOG1240|consensus

Probab=99.59  E-value=6.8e-13  Score=133.02  Aligned_cols=221  Identities=15%  Similarity=0.094  Sum_probs=155.6

Q ss_pred             CcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC
Q psy17682        157 DHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS  236 (490)
Q Consensus       157 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~  236 (490)
                      .+..+..|+..|..++.++....+++|||.||+|++|+++.-..-........++.....++.++...+.+. .+|.++.
T Consensus      1040 lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~-~~Av~t~ 1118 (1431)
T KOG1240|consen 1040 LVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGD-QFAVSTK 1118 (1431)
T ss_pred             EeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCC-eEEEEcC
Confidence            355677899999999998866589999999999999998743222111122223333567899999999985 8999999


Q ss_pred             CCcEEEEECCCC--e-----eEEEEecC-CCcEEEE-EEcC-CCC-EEEEEeCCCeEEEEeCCCCceeeeee-ecCCCce
Q psy17682        237 DNNVAIWNVGTG--E-----IMIQIECH-PDIVYSA-SWNW-DGS-KLLTTCKDKKMRIINPRTGAIEEEAV-CHEGSKA  304 (490)
Q Consensus       237 dg~v~iwd~~~~--~-----~~~~~~~~-~~~v~~~-~~~~-~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~  304 (490)
                      ||.|++.+++..  +     .......+ .+.+.++ ++.. .+. .++.+...+.|..||+++.....+++ ......+
T Consensus      1119 DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~v 1198 (1431)
T KOG1240|consen 1119 DGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLV 1198 (1431)
T ss_pred             CCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccce
Confidence            999999998752  1     11111111 2333333 3433 233 77888888999999999887666655 1222349


Q ss_pred             eEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCC---CeEEEEec-CCCeEEEEEecC
Q psy17682        305 TRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDT---NLVYLCGK-GDSVIRYFEITA  380 (490)
Q Consensus       305 ~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~g~-~dg~i~iwd~~~  380 (490)
                      ++++.+|.+.+++.|+   ..|.+.+||++- +.+......++...+..+..+|-.   ...+++|+ ..+.|.+|++.+
T Consensus      1199 TSi~idp~~~WlviGt---s~G~l~lWDLRF-~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~ 1274 (1431)
T KOG1240|consen 1199 TSIVIDPWCNWLVIGT---SRGQLVLWDLRF-RVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMET 1274 (1431)
T ss_pred             eEEEecCCceEEEEec---CCceEEEEEeec-CceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeeccc
Confidence            9999999999999999   688999999996 444444555556677777766643   45545555 678999999998


Q ss_pred             CC
Q psy17682        381 EP  382 (490)
Q Consensus       381 ~~  382 (490)
                      +.
T Consensus      1275 g~ 1276 (1431)
T KOG1240|consen 1275 GL 1276 (1431)
T ss_pred             Cc
Confidence            75

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.58  E-value=8.2e-13  Score=128.83  Aligned_cols=175  Identities=14%  Similarity=0.152  Sum_probs=113.4

Q ss_pred             eeEEEECCCCCCEEEEEeCCC--cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe-CCCc--EEE
Q psy17682        168 VLDIAWSPHDDNVIASGSEDC--VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG-SDNN--VAI  242 (490)
Q Consensus       168 V~~~~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~dg~--v~i  242 (490)
                      ..+++|+|+|..++++.+.+|  .|.+||+.+++...        +..+......++|+|+|+ .|+..+ .+|.  |.+
T Consensus       250 ~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~--------lt~~~~~~~~~~~spDG~-~l~f~sd~~g~~~iy~  320 (433)
T PRK04922        250 NGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTR--------LTNHFGIDTEPTWAPDGK-SIYFTSDRGGRPQIYR  320 (433)
T ss_pred             ccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeEE--------CccCCCCccceEECCCCC-EEEEEECCCCCceEEE
Confidence            446799999955556666666  59999988775422        222444557789999997 555444 4554  666


Q ss_pred             EECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCC---eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682        243 WNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK---KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG  319 (490)
Q Consensus       243 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~  319 (490)
                      +|+.+++.. .+..+.......+|+|+|+.|+..+.++   .|.+||+.+++.. .+. +.. ......|+|||+.++..
T Consensus       321 ~dl~~g~~~-~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~-~~~~p~~spdG~~i~~~  396 (433)
T PRK04922        321 VAASGGSAE-RLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGS-LDESPSFAPNGSMVLYA  396 (433)
T ss_pred             EECCCCCeE-EeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC-CCC-CCCCceECCCCCEEEEE
Confidence            677666543 3332334455789999999998776443   6999999887654 332 222 24556899999988877


Q ss_pred             eCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecC
Q psy17682        320 FSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDP  358 (490)
Q Consensus       320 ~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~  358 (490)
                      +.......|.++++.... ...+.  .+...+..++|+|
T Consensus       397 s~~~g~~~L~~~~~~g~~-~~~l~--~~~g~~~~p~wsp  432 (433)
T PRK04922        397 TREGGRGVLAAVSTDGRV-RQRLV--SADGEVREPAWSP  432 (433)
T ss_pred             EecCCceEEEEEECCCCc-eEEcc--cCCCCCCCCccCC
Confidence            754445678888886532 22221  2234567777876

>KOG1409|consensus

Probab=99.58  E-value=3.3e-13  Score=117.35  Aligned_cols=305  Identities=14%  Similarity=0.184  Sum_probs=198.0

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCC-CCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKD-GYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      .+..++||.+.|+....-|.. .-+++.+.|.++|||--.+ ++.-+              .+..        .......
T Consensus        16 ll~~~eG~~d~vn~~~l~~~e-~gv~~~s~drtvrv~lkrds~q~wp--------------sI~~--------~mP~~~~   72 (404)
T KOG1409|consen   16 LLSKIEGSQDDVNAAILIPKE-EGVISVSEDRTVRVWLKRDSGQYWP--------------SIYH--------YMPSPCS   72 (404)
T ss_pred             hhhhhcCchhhhhhheeccCC-CCeEEccccceeeeEEeccccccCc--------------hhhh--------hCCCCce
Confidence            356789999999999999988 7899999999999996443 33111              0000        0112344


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                      ++...++     ...+..+-.+|++.-+.+.    +..+.....+....|...|..+-|+-.- ..+++.+.|..+.---
T Consensus        73 ~~~y~~e-----~~~L~vg~~ngtvtefs~s----edfnkm~~~r~~~~h~~~v~~~if~~~~-e~V~s~~~dk~~~~hc  142 (404)
T KOG1409|consen   73 AMEYVSE-----SRRLYVGQDNGTVTEFALS----EDFNKMTFLKDYLAHQARVSAIVFSLTH-EWVLSTGKDKQFAWHC  142 (404)
T ss_pred             Eeeeecc-----ceEEEEEEecceEEEEEhh----hhhhhcchhhhhhhhhcceeeEEecCCc-eeEEEeccccceEEEe
Confidence            5555554     3567777888888888776    4433344455667899999999998755 7888888886654333


Q ss_pred             CCCCCccccc----------------------------------ccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcE
Q psy17682        195 IPDGGISRTL----------------------------------TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNV  240 (490)
Q Consensus       195 ~~~~~~~~~~----------------------------------~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v  240 (490)
                      .+.+..+..+                                  -.+...+.+|.+.+++++|.|... +|.+|..|..+
T Consensus       143 ~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~-~LfSg~~d~~v  221 (404)
T KOG1409|consen  143 TESGNRLGGYNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQR-LLFSGASDHSV  221 (404)
T ss_pred             eccCCcccceEeeccCCCCceeeEEEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCc-EEEeccccCce
Confidence            3332221111                                  144566788999999999999875 99999999999


Q ss_pred             EEEECCCCe-eEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee-e----------------------
Q psy17682        241 AIWNVGTGE-IMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEE-A----------------------  296 (490)
Q Consensus       241 ~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~----------------------  296 (490)
                      .+||+.-++ ....+.+|...|..+...+--+.+++++.||.|.+|+.+......- .                      
T Consensus       222 i~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~  301 (404)
T KOG1409|consen  222 IMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWD  301 (404)
T ss_pred             EEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccceeecCccccccchhhhhCchHHHHHHHHHh
Confidence            999997544 4556778999999999888888999999999999999875321100 0                      


Q ss_pred             ------eecC----CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC------CCCeEEEeccCCCceeeeeecCCC
Q psy17682        297 ------VCHE----GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL------DEPIVMVELDTSNGVMFPLYDPDT  360 (490)
Q Consensus       297 ------~~~~----~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~------~~~~~~~~~~~~~~i~~~~~s~~~  360 (490)
                            ..|.    +..+...+-+....+...|.    .-.+++-|.-..      ..+..+. .....+|+.+.+...-
T Consensus       302 ~k~~glr~h~crkcg~avc~~c~s~~~~~p~mg~----e~~vR~~~~c~~~i~~~~~t~LA~p-hei~tgItamhlqetl  376 (404)
T KOG1409|consen  302 RKQLGLRQHHCRKCGKAVCGKCSSNRSSYPTMGF----EFSVRVCDSCYPTIKDEERTPLAIP-HEIKTGITAMHLQETL  376 (404)
T ss_pred             hhhhhhhhhhhhhhhhhcCcccccCccccccccc----eeEEEEecccchhhhcCCCCccccc-cccccceeEEEhhhhc
Confidence                  0000    11111111122222222232    233444332110      1112211 1233568888888777


Q ss_pred             CeEEEEecCCCeEEEEEecC
Q psy17682        361 NLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       361 ~~l~~~g~~dg~i~iwd~~~  380 (490)
                      ..| ++++.|..|+|||++.
T Consensus       377 glL-vTsG~~Rvi~iwd~~~  395 (404)
T KOG1409|consen  377 GLL-VTSGTDRVIKIWDVRS  395 (404)
T ss_pred             cce-eecCCceEEEEEechh
Confidence            777 7889999999999975

>KOG2394|consensus

Probab=99.58  E-value=7.6e-14  Score=128.05  Aligned_cols=165  Identities=16%  Similarity=0.279  Sum_probs=118.6

Q ss_pred             ceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccccc
Q psy17682         45 RRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVK  124 (490)
Q Consensus        45 ~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  124 (490)
                      .+|+|++|-|.++.+++.+-.+|.+.++|.....-..            ....                   ..-++   
T Consensus       220 tsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t------------~p~~-------------------~~~k~---  265 (636)
T KOG2394|consen  220 SSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGAT------------APSY-------------------QALKD---  265 (636)
T ss_pred             cceEEEEEEeCCCceEEEEEecCceEEeeccccccCC------------CCcc-------------------cccCC---
Confidence            7899999999988888888889999999874211000            0000                   00000   


Q ss_pred             ceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccc
Q psy17682        125 EFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL  204 (490)
Q Consensus       125 ~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  204 (490)
                                 .+.+.|..-     ........+..+.--++.|+..+|+||| .+||+.+.||.+||+|..+.+++..+
T Consensus       266 -----------~~~f~i~t~-----ksk~~rNPv~~w~~~~g~in~f~FS~DG-~~LA~VSqDGfLRvF~fdt~eLlg~m  328 (636)
T KOG2394|consen  266 -----------GDQFAILTS-----KSKKTRNPVARWHIGEGSINEFAFSPDG-KYLATVSQDGFLRIFDFDTQELLGVM  328 (636)
T ss_pred             -----------CCeeEEeee-----eccccCCccceeEeccccccceeEcCCC-ceEEEEecCceEEEeeccHHHHHHHH
Confidence                       000001000     0001112223333345689999999988 89999999999999999888776554


Q ss_pred             ccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC
Q psy17682        205 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW  268 (490)
Q Consensus       205 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~  268 (490)
                      ..       --+...|++|+|||+ ++++|++|..|.||.+..++.+..-++|+..|..++|.|
T Consensus       329 kS-------YFGGLLCvcWSPDGK-yIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  329 KS-------YFGGLLCVCWSPDGK-YIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             Hh-------hccceEEEEEcCCcc-EEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence            32       446789999999996 999999999999999999999999999999999999983

>KOG3881|consensus

Probab=99.58  E-value=7e-13  Score=117.30  Aligned_cols=230  Identities=12%  Similarity=0.067  Sum_probs=169.7

Q ss_pred             ceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC-
Q psy17682        159 ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-  237 (490)
Q Consensus       159 ~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-  237 (490)
                      ....+.+++|.+++...   ..|++|-.+|.+.+|..+.+..-.   .+...+. ....+..+.-++..++++++||.. 
T Consensus        99 ~~~~l~~~~I~gl~~~d---g~Litc~~sG~l~~~~~k~~d~hs---s~l~~la-~g~g~~~~r~~~~~p~Iva~GGke~  171 (412)
T KOG3881|consen   99 KTVSLGTKSIKGLKLAD---GTLITCVSSGNLQVRHDKSGDLHS---SKLIKLA-TGPGLYDVRQTDTDPYIVATGGKEN  171 (412)
T ss_pred             cccccccccccchhhcC---CEEEEEecCCcEEEEeccCCcccc---ccceeee-cCCceeeeccCCCCCceEecCchhc
Confidence            34456678888888762   478899999999999988554321   1222222 235677788888887788889998 


Q ss_pred             -CcEEEEECCCCeeEEEEecC---------CCcEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCc-eeeeeeecCCCce
Q psy17682        238 -NNVAIWNVGTGEIMIQIECH---------PDIVYSASWNWD--GSKLLTTCKDKKMRIINPRTGA-IEEEAVCHEGSKA  304 (490)
Q Consensus       238 -g~v~iwd~~~~~~~~~~~~~---------~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~  304 (490)
                       ..+.+||+...+.+.+-+.-         .-.++++.|-+.  ...|++++.-+.+++||.+.++ ++..+..... ++
T Consensus       172 ~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~-~i  250 (412)
T KOG3881|consen  172 INELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLEN-PI  250 (412)
T ss_pred             ccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccC-cc
Confidence             88999999988766654421         223678889887  7899999999999999999764 6666654444 49


Q ss_pred             eEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682        305 TRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF  384 (490)
Q Consensus       305 ~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~  384 (490)
                      +++...|+|+++.+|.   ..+.+..+|++.+..+... .-+..+++.++..+|..+++ ++++-|..+||+|+.+.+.+
T Consensus       251 s~~~l~p~gn~Iy~gn---~~g~l~~FD~r~~kl~g~~-~kg~tGsirsih~hp~~~~l-as~GLDRyvRIhD~ktrkll  325 (412)
T KOG3881|consen  251 SSTGLTPSGNFIYTGN---TKGQLAKFDLRGGKLLGCG-LKGITGSIRSIHCHPTHPVL-ASCGLDRYVRIHDIKTRKLL  325 (412)
T ss_pred             eeeeecCCCcEEEEec---ccchhheecccCceeeccc-cCCccCCcceEEEcCCCceE-EeeccceeEEEeecccchhh
Confidence            9999999999999998   6889999999987643332 22455779999999999998 88999999999999996532


Q ss_pred             eEEeeeeeCCCceeeEEEeeC
Q psy17682        385 VHYINTFQTPDPQRGIGMMPK  405 (490)
Q Consensus       385 ~~~~~~~~~~~~i~~~~~sp~  405 (490)
                          ...-....++++-+.++
T Consensus       326 ----~kvYvKs~lt~il~~~~  342 (412)
T KOG3881|consen  326 ----HKVYVKSRLTFILLRDD  342 (412)
T ss_pred             ----hhhhhhccccEEEecCC
Confidence                11112234566655554

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.58  E-value=2.9e-13  Score=115.76  Aligned_cols=155  Identities=8%  Similarity=0.153  Sum_probs=109.4

Q ss_pred             EEEEEeeCCCCEEEEEeC---------CCcEEEEECCC-CeeEEEEec-CCCcEEEEEEcCCCCEEEEE--eCCCeEEEE
Q psy17682        219 GLVLWHPTAQNVLLTAGS---------DNNVAIWNVGT-GEIMIQIEC-HPDIVYSASWNWDGSKLLTT--CKDKKMRII  285 (490)
Q Consensus       219 ~~~~~~p~~~~~l~s~~~---------dg~v~iwd~~~-~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~--~~dg~i~iw  285 (490)
                      ..+.|+|+|..+++....         -+...+|.++. +..+..+.. ..++|.+++|+|+|+.|++.  ..++.|.+|
T Consensus         9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly   88 (194)
T PF08662_consen    9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY   88 (194)
T ss_pred             EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence            568899999765555541         23455665532 234444442 34579999999999987655  356799999


Q ss_pred             eCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEE
Q psy17682        286 NPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYL  365 (490)
Q Consensus       286 d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  365 (490)
                      |++ ++.+..+.  .. ....+.|+|+|+++++++-....|.+.+||.++.+.   +....+ ..+..++|+|||++++.
T Consensus        89 d~~-~~~i~~~~--~~-~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~---i~~~~~-~~~t~~~WsPdGr~~~t  160 (194)
T PF08662_consen   89 DVK-GKKIFSFG--TQ-PRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKK---ISTFEH-SDATDVEWSPDGRYLAT  160 (194)
T ss_pred             cCc-ccEeEeec--CC-CceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEE---eecccc-CcEEEEEEcCCCCEEEE
Confidence            997 55555554  22 378899999999999987544568899999996542   333333 45789999999999965


Q ss_pred             EecC-----CCeEEEEEecCC
Q psy17682        366 CGKG-----DSVIRYFEITAE  381 (490)
Q Consensus       366 ~g~~-----dg~i~iwd~~~~  381 (490)
                      +.+.     |+.++||+....
T Consensus       161 a~t~~r~~~dng~~Iw~~~G~  181 (194)
T PF08662_consen  161 ATTSPRLRVDNGFKIWSFQGR  181 (194)
T ss_pred             EEeccceeccccEEEEEecCe
Confidence            5543     889999999643

>KOG1334|consensus

Probab=99.58  E-value=2.1e-14  Score=130.17  Aligned_cols=258  Identities=17%  Similarity=0.187  Sum_probs=182.6

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccc--------------------------------
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLT--------------------------------  205 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------------------  205 (490)
                      ...|.+|.+.|..+.|+..| ..|++|+.|..|.+||...++....+.                                
T Consensus       135 ~~kL~~H~GcVntV~FN~~G-d~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~  213 (559)
T KOG1334|consen  135 QKKLNKHKGCVNTVHFNQRG-DVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRV  213 (559)
T ss_pred             hhcccCCCCccceeeecccC-ceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceee
Confidence            44678999999999999988 899999999999999986554432221                                


Q ss_pred             ---------cceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe---cCCC---cEEEEEEcCCC
Q psy17682        206 ---------EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE---CHPD---IVYSASWNWDG  270 (490)
Q Consensus       206 ---------~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---~~~~---~v~~~~~~~~~  270 (490)
                               .....+..|.++|.-++.-|+..+.|.+++.|+.+.-+|++.+.+...+.   .+..   ....++..|-.
T Consensus       214 s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~n  293 (559)
T KOG1334|consen  214 SEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRN  293 (559)
T ss_pred             eeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCC
Confidence                     11223445888999999999988899999999999999998775443332   2333   56789999954


Q ss_pred             -CEEEEEeCCCeEEEEeCCCCcee------eeee-----ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC
Q psy17682        271 -SKLLTTCKDKKMRIINPRTGAIE------EEAV-----CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE  338 (490)
Q Consensus       271 -~~l~~~~~dg~i~iwd~~~~~~~------~~~~-----~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~  338 (490)
                       ..+++++.|..+++||.+.-...      ..+.     ......|++++|+.++.-|.++.   .|-.|+++....+.-
T Consensus       294 t~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSY---nDe~IYLF~~~~~~G  370 (559)
T KOG1334|consen  294 TNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASY---NDEDIYLFNKSMGDG  370 (559)
T ss_pred             ccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeee---cccceEEeccccccC
Confidence             58999999999999999854221      2221     12223489999997765555555   577888885433221


Q ss_pred             --C--------eEEE-eccCCC--ceeeee-ecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee
Q psy17682        339 --P--------IVMV-ELDTSN--GVMFPL-YDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP  404 (490)
Q Consensus       339 --~--------~~~~-~~~~~~--~i~~~~-~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp  404 (490)
                        +        .... ..+|..  .|-.+- |-|...|+ ++|+.-|.|.||+-.+++ ++..+..-  ..-|++|.=+|
T Consensus       371 ~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyV-vSGSDCGhIFiW~K~t~e-ii~~MegD--r~VVNCLEpHP  446 (559)
T KOG1334|consen  371 SEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYV-VSGSDCGHIFIWDKKTGE-IIRFMEGD--RHVVNCLEPHP  446 (559)
T ss_pred             CCCCCCcchhhccchhhcccccccccceeeeccCccceE-EecCccceEEEEecchhH-HHHHhhcc--cceEeccCCCC
Confidence              1        1111 223332  355554 57888888 899999999999999987 33333322  23789999999


Q ss_pred             CceeEEee--cceeEEEEecC
Q psy17682        405 KRGCDVNS--CEIGRFFRLNN  423 (490)
Q Consensus       405 ~~~~l~~~--~~~~~~~~~~~  423 (490)
                      --.+|+++  +..++||-..+
T Consensus       447 ~~PvLAsSGid~DVKIWTP~~  467 (559)
T KOG1334|consen  447 HLPVLASSGIDHDVKIWTPLT  467 (559)
T ss_pred             CCchhhccCCccceeeecCCc
Confidence            98888887  44889998744

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.57  E-value=1.3e-12  Score=126.73  Aligned_cols=174  Identities=17%  Similarity=0.150  Sum_probs=113.8

Q ss_pred             eEEEECCCCCCEEEEEeCCC--cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC-CCc--EEEE
Q psy17682        169 LDIAWSPHDDNVIASGSEDC--VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS-DNN--VAIW  243 (490)
Q Consensus       169 ~~~~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-dg~--v~iw  243 (490)
                      ..++|+|+|..++++.+.+|  .|.+||+++++...        +..+...+....|+|+|+ .|+..+. ++.  |.++
T Consensus       246 ~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~--------lt~~~~~~~~~~wSPDG~-~I~f~s~~~g~~~Iy~~  316 (429)
T PRK03629        246 GAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ--------VTDGRSNNTEPTWFPDSQ-NLAYTSDQAGRPQVYKV  316 (429)
T ss_pred             CCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEE--------ccCCCCCcCceEECCCCC-EEEEEeCCCCCceEEEE
Confidence            35799999954444555555  48889988775432        222445678899999996 5554444 444  4445


Q ss_pred             ECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEe
Q psy17682        244 NVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD---KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       244 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~  320 (490)
                      |+.+++. ..+...........|+|||+.|+..+.+   ..|++||+.+++.. .+....  ......|+|||+.++.++
T Consensus       317 d~~~g~~-~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~~--~~~~p~~SpDG~~i~~~s  392 (429)
T PRK03629        317 NINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDTF--LDETPSIAPNGTMVIYSS  392 (429)
T ss_pred             ECCCCCe-EEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCCC--CCCCceECCCCCEEEEEE
Confidence            6666554 3444344556678999999998877643   35889999887643 232211  134578999999999888


Q ss_pred             CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecC
Q psy17682        321 SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDP  358 (490)
Q Consensus       321 ~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~  358 (490)
                      .++....+.++++.... ...+.  .+...+..++|+|
T Consensus       393 ~~~~~~~l~~~~~~G~~-~~~l~--~~~~~~~~p~Wsp  427 (429)
T PRK03629        393 SQGMGSVLNLVSTDGRF-KARLP--ATDGQVKFPAWSP  427 (429)
T ss_pred             cCCCceEEEEEECCCCC-eEECc--cCCCCcCCcccCC
Confidence            66556678888886433 22222  3445678888887

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.57  E-value=2.2e-12  Score=126.00  Aligned_cols=205  Identities=13%  Similarity=0.132  Sum_probs=138.1

Q ss_pred             CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC---CCcEEEEECCCCeeEEEEecCCCcEEEE
Q psy17682        188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS---DNNVAIWNVGTGEIMIQIECHPDIVYSA  264 (490)
Q Consensus       188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~---dg~v~iwd~~~~~~~~~~~~~~~~v~~~  264 (490)
                      ..|.++|...... +.       +..|...+.+.+|+|+|+ .|+..+.   +..|.+||+.+++.. .+..+.+.+...
T Consensus       182 ~~l~~~d~dg~~~-~~-------lt~~~~~v~~p~wSpDG~-~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~  251 (435)
T PRK05137        182 KRLAIMDQDGANV-RY-------LTDGSSLVLTPRFSPNRQ-EITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAP  251 (435)
T ss_pred             eEEEEECCCCCCc-EE-------EecCCCCeEeeEECCCCC-EEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCc
Confidence            3688888744332 22       334778899999999997 5555543   468999999887653 344466677889


Q ss_pred             EEcCCCCEEE-EEeCCCe--EEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeE
Q psy17682        265 SWNWDGSKLL-TTCKDKK--MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIV  341 (490)
Q Consensus       265 ~~~~~~~~l~-~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~  341 (490)
                      +|+|||+.|+ +.+.++.  |++||+.+++... +..+.. ......|+|||+.++..++......|+++|+..... ..
T Consensus       252 ~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~-Lt~~~~-~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~-~~  328 (435)
T PRK05137        252 RFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTR-LTDSPA-IDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNP-RR  328 (435)
T ss_pred             EECCCCCEEEEEEecCCCceEEEEECCCCceEE-ccCCCC-ccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCe-EE
Confidence            9999998776 4455554  8888998876533 433333 366789999999888877543345788899876442 22


Q ss_pred             EEeccCCCceeeeeecCCCCeEEEEecCC--CeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee
Q psy17682        342 MVELDTSNGVMFPLYDPDTNLVYLCGKGD--SVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS  412 (490)
Q Consensus       342 ~~~~~~~~~i~~~~~s~~~~~l~~~g~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~  412 (490)
                      +.  .....+..+.|+|||+.|+++....  ..|.+||+..+.  .+.+   .....+..+.|+|||+.++..
T Consensus       329 lt--~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~--~~~l---t~~~~~~~p~~spDG~~i~~~  394 (435)
T PRK05137        329 IS--FGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG--ERIL---TSGFLVEGPTWAPNGRVIMFF  394 (435)
T ss_pred             ee--cCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc--eEec---cCCCCCCCCeECCCCCEEEEE
Confidence            22  1234466789999999996655333  367888876543  1222   222356788999999877654

>KOG1354|consensus

Probab=99.57  E-value=2e-13  Score=118.66  Aligned_cols=277  Identities=10%  Similarity=0.090  Sum_probs=179.1

Q ss_pred             cccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccC---CCCCcccccCCeeEe
Q psy17682         42 YHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGG---KGGANRNSTANEITI  118 (490)
Q Consensus        42 gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~  118 (490)
                      ...+-|.+|+|...| .+|+||.++|.|.++.-......     .....    ......-..   -....-...++.+.|
T Consensus        23 teadiis~vef~~~G-e~LatGdkgGRVv~f~r~~~~~~-----ey~~~----t~fqshepEFDYLkSleieEKinkIrw   92 (433)
T KOG1354|consen   23 TEADIISAVEFDHYG-ERLATGDKGGRVVLFEREKLYKG-----EYNFQ----TEFQSHEPEFDYLKSLEIEEKINKIRW   92 (433)
T ss_pred             chhcceeeEEeeccc-ceEeecCCCCeEEEeeccccccc-----ceeee----eeeeccCcccchhhhhhhhhhhhhcee
Confidence            345779999999999 99999999999999965542210     00000    000000000   011223446778888


Q ss_pred             ccccccceEEEEEeeCCCceEEEECCCCCCCCccc----------------C-----------CCCccee-ecccCCeeE
Q psy17682        119 SEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGR----------------I-----------NADHALV-GGHKGPVLD  170 (490)
Q Consensus       119 s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~----------------~-----------~~~~~~~-~~h~~~V~~  170 (490)
                      .++.   ..+.....+.+.++.+|.+.........                .           -.+.+++ .+|.--|++
T Consensus        93 ~~~~---n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNS  169 (433)
T KOG1354|consen   93 LDDG---NLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINS  169 (433)
T ss_pred             cCCC---CccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeee
Confidence            7664   2445666889999999987632222100                0           0011222 368888999


Q ss_pred             EEECCCCCCEEEEEeCCCcEEEEECCCCCccccc-ccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe
Q psy17682        171 IAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL-TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE  249 (490)
Q Consensus       171 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~  249 (490)
                      +.++.|+ ..++++ .|=.|.+|+++--.....+ ......+..-..-|++..|+|...++++-.+..|+|++.|++...
T Consensus       170 IS~NsD~-Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~a  247 (433)
T KOG1354|consen  170 ISVNSDK-ETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSA  247 (433)
T ss_pred             eeecCcc-ceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhh
Confidence            9999987 566665 5779999998743221111 111111222345689999999988899999999999999998532


Q ss_pred             eEE----E------------EecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCceeeeeeecCCC----------
Q psy17682        250 IMI----Q------------IECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPR-TGAIEEEAVCHEGS----------  302 (490)
Q Consensus       250 ~~~----~------------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~----------  302 (490)
                      ..-    .            +..--..|..+.|+++|+++++-+. -+|++||+. ..+++.++..|...          
T Consensus       248 LCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEn  326 (433)
T KOG1354|consen  248 LCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYEN  326 (433)
T ss_pred             hhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhc
Confidence            111    1            1122345889999999999997543 789999994 45677777655421          


Q ss_pred             ----ceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC
Q psy17682        303 ----KATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD  337 (490)
Q Consensus       303 ----~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~  337 (490)
                          .-..++|+.++..+++|+   ....+++++...+.
T Consensus       327 D~IfdKFec~~sg~~~~v~TGs---y~n~frvf~~~~gs  362 (433)
T KOG1354|consen  327 DAIFDKFECSWSGNDSYVMTGS---YNNVFRVFNLARGS  362 (433)
T ss_pred             cchhheeEEEEcCCcceEeccc---ccceEEEecCCCCc
Confidence                124678999999999998   68899999977654

>KOG2321|consensus

Probab=99.57  E-value=9.2e-13  Score=121.98  Aligned_cols=286  Identities=11%  Similarity=0.090  Sum_probs=189.8

Q ss_pred             cccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEec
Q psy17682         40 LLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITIS  119 (490)
Q Consensus        40 l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  119 (490)
                      -.+|...-+.|..+|+|..+++||-.--.|+++|+..-.+..          .+..         .    ...|.-.-++
T Consensus        47 dfe~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKF----------ERhl---------D----ae~V~feiLs  103 (703)
T KOG2321|consen   47 DFEMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKF----------ERHL---------D----AEVVDFEILS  103 (703)
T ss_pred             hcCCccccceeEecCCCcEEEEecccCCceEEEEcccceeee----------eecc---------c----ccceeEEEec
Confidence            346888899999999998888888888999999998743211          0100         0    0011112222


Q ss_pred             cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682        120 EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG  199 (490)
Q Consensus       120 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~  199 (490)
                      .|+.     .++....+..|-.....      |.   ...+  .-...-..++++.-...+++.| ....|.-.+++.|+
T Consensus       104 DD~S-----K~v~L~~DR~IefHak~------G~---hy~~--RIP~~GRDm~y~~~scDly~~g-sg~evYRlNLEqGr  166 (703)
T KOG2321|consen  104 DDYS-----KSVFLQNDRTIEFHAKY------GR---HYRT--RIPKFGRDMKYHKPSCDLYLVG-SGSEVYRLNLEQGR  166 (703)
T ss_pred             cchh-----hheEeecCceeeehhhc------Ce---eeee--ecCcCCccccccCCCccEEEee-cCcceEEEEccccc
Confidence            2321     11112223222222110      00   0000  0001123344543332344444 44578888999998


Q ss_pred             cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec------CCC-----cEEEEEEcC
Q psy17682        200 ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC------HPD-----IVYSASWNW  268 (490)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~------~~~-----~v~~~~~~~  268 (490)
                      .+..+..       ..+.++++..++... +|++|+.+|.|..||.+..+.+..+..      |.+     .|+++.|+.
T Consensus       167 fL~P~~~-------~~~~lN~v~in~~hg-Lla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d  238 (703)
T KOG2321|consen  167 FLNPFET-------DSGELNVVSINEEHG-LLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRD  238 (703)
T ss_pred             ccccccc-------ccccceeeeecCccc-eEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecC
Confidence            7766543       557899999999875 899999999999999998877766642      333     399999999


Q ss_pred             CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC--CcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc
Q psy17682        269 DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS--GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD  346 (490)
Q Consensus       269 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~--~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~  346 (490)
                      +|-.+++|+.+|.+.|||+++.+++..-......++..+.|.+.  +..+++..    ...++|||-.+++.   .....
T Consensus       239 ~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~D----k~~~kiWd~~~Gk~---~asiE  311 (703)
T KOG2321|consen  239 DGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSMD----KRILKIWDECTGKP---MASIE  311 (703)
T ss_pred             CceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEecc----hHHhhhcccccCCc---eeecc
Confidence            99999999999999999999999887665444556888999776  45666653    77899999998764   33334


Q ss_pred             CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        347 TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       347 ~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      ....+..+++-|++.++ +++-.++.+..|=+..-
T Consensus       312 pt~~lND~C~~p~sGm~-f~Ane~~~m~~yyiP~L  345 (703)
T KOG2321|consen  312 PTSDLNDFCFVPGSGMF-FTANESSKMHTYYIPSL  345 (703)
T ss_pred             ccCCcCceeeecCCceE-EEecCCCcceeEEcccc
Confidence            45669999999998887 67878887877766653

>KOG2321|consensus

Probab=99.57  E-value=3.6e-13  Score=124.64  Aligned_cols=241  Identities=15%  Similarity=0.183  Sum_probs=173.5

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccc--ccc-------------------cceeeecccc------
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISR--TLT-------------------EPVVDLLYHQ------  215 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~-------------------~~~~~~~~~~------  215 (490)
                      +|...-+.|..+|||..++++|..-..|++||+.+-.+..  .+.                   .....+..|.      
T Consensus        49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy  128 (703)
T KOG2321|consen   49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHY  128 (703)
T ss_pred             CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeee
Confidence            5778889999999998888999999999999987542210  000                   0000011111      


Q ss_pred             -----cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy17682        216 -----RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTG  290 (490)
Q Consensus       216 -----~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  290 (490)
                           ....+++++.-.. -|+.++....|+-++++.|..+.-+....+.++++..++...+|++|+.+|.+..||.++.
T Consensus       129 ~~RIP~~GRDm~y~~~sc-Dly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~k  207 (703)
T KOG2321|consen  129 RTRIPKFGRDMKYHKPSC-DLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDK  207 (703)
T ss_pred             eeecCcCCccccccCCCc-cEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhh
Confidence                 1122344433222 2444555567888999999988888877789999999999999999999999999999988


Q ss_pred             ceeeeeeecCC----------CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCC
Q psy17682        291 AIEEEAVCHEG----------SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDT  360 (490)
Q Consensus       291 ~~~~~~~~~~~----------~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~  360 (490)
                      ..+.++.....          ..++++.|+.+|..+++|+   ..|.+.|||++. ..|..........+|..+.|-+.+
T Consensus       208 srv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGt---s~G~v~iyDLRa-~~pl~~kdh~~e~pi~~l~~~~~~  283 (703)
T KOG2321|consen  208 SRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGT---STGSVLIYDLRA-SKPLLVKDHGYELPIKKLDWQDTD  283 (703)
T ss_pred             hhheeeecccccCCCccccccCcceEEEecCCceeEEeec---cCCcEEEEEccc-CCceeecccCCccceeeecccccC
Confidence            77666652221          2389999999999999999   799999999997 455666655556678899997753


Q ss_pred             --CeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc
Q psy17682        361 --NLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       361 --~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  414 (490)
                        +.+ + ......++|||-.+++++    ........++.+|+-|++.++..+.+
T Consensus       284 ~q~~v-~-S~Dk~~~kiWd~~~Gk~~----asiEpt~~lND~C~~p~sGm~f~Ane  333 (703)
T KOG2321|consen  284 QQNKV-V-SMDKRILKIWDECTGKPM----ASIEPTSDLNDFCFVPGSGMFFTANE  333 (703)
T ss_pred             CCceE-E-ecchHHhhhcccccCCce----eeccccCCcCceeeecCCceEEEecC
Confidence              334 3 345678999999999844    33344456999999999877776644

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.56  E-value=4.2e-12  Score=124.24  Aligned_cols=226  Identities=15%  Similarity=0.217  Sum_probs=144.0

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeC-C--CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSE-D--CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS  236 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~-d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~  236 (490)
                      .+..+...+...+|+|+| +.|+..+. +  ..|.+|++.+++.... .       ...+.+....|+|+|+.++++...
T Consensus       193 ~l~~~~~~~~~p~wSpDG-~~la~~s~~~~~~~l~~~~l~~g~~~~l-~-------~~~g~~~~~~~SpDG~~la~~~~~  263 (430)
T PRK00178        193 TLLQSREPILSPRWSPDG-KRIAYVSFEQKRPRIFVQNLDTGRREQI-T-------NFEGLNGAPAWSPDGSKLAFVLSK  263 (430)
T ss_pred             EEecCCCceeeeeECCCC-CEEEEEEcCCCCCEEEEEECCCCCEEEc-c-------CCCCCcCCeEECCCCCEEEEEEcc
Confidence            445677889999999999 56655443 2  3688999987754321 1       123345578999999745556655


Q ss_pred             CC--cEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC-C--CeEEEEeCCCCceeeeeeecCCCceeEEEEeC
Q psy17682        237 DN--NVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK-D--KKMRIINPRTGAIEEEAVCHEGSKATRAIYLK  311 (490)
Q Consensus       237 dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~  311 (490)
                      +|  .|.++|+.+++.. .+..+........|+|||+.|+..+. +  ..|+++|+.+++...... . +.......|+|
T Consensus       264 ~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~-~-~~~~~~~~~Sp  340 (430)
T PRK00178        264 DGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTF-V-GNYNARPRLSA  340 (430)
T ss_pred             CCCceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec-C-CCCccceEECC
Confidence            55  5888899877643 35445555677899999998876664 3  358888888776433222 1 12245578999


Q ss_pred             CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC--eEEEEEecCCCCeeEEee
Q psy17682        312 SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS--VIRYFEITAEPPFVHYIN  389 (490)
Q Consensus       312 ~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg--~i~iwd~~~~~~~~~~~~  389 (490)
                      +|+.++..........|.++|+.++.. ..+.   .........|+|||+.++++...++  .+.++++....  ...+.
T Consensus       341 dg~~i~~~~~~~~~~~l~~~dl~tg~~-~~lt---~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~~--~~~l~  414 (430)
T PRK00178        341 DGKTLVMVHRQDGNFHVAAQDLQRGSV-RILT---DTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSINGRV--RLPLP  414 (430)
T ss_pred             CCCEEEEEEccCCceEEEEEECCCCCE-EEcc---CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCCCc--eEECc
Confidence            999988776433345688999887542 1111   1122346789999999977765554  45555664332  22222


Q ss_pred             eeeCCCceeeEEEeeC
Q psy17682        390 TFQTPDPQRGIGMMPK  405 (490)
Q Consensus       390 ~~~~~~~i~~~~~sp~  405 (490)
                        ...+.+...+|+|-
T Consensus       415 --~~~g~~~~p~ws~~  428 (430)
T PRK00178        415 --TAQGEVREPSWSPY  428 (430)
T ss_pred             --CCCCCcCCCccCCC
Confidence              12345677778763

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.55  E-value=7.6e-12  Score=121.99  Aligned_cols=225  Identities=15%  Similarity=0.170  Sum_probs=140.6

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEE-eCCC--cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASG-SEDC--VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS  236 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~-~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~  236 (490)
                      .+..+...+.+..|+|+| +.|+.. ..++  .|.+||+.+++... +.       ...+......|+|+|+.++++.+.
T Consensus       212 ~l~~~~~~~~~p~wSPDG-~~La~~s~~~g~~~L~~~dl~tg~~~~-lt-------~~~g~~~~~~wSPDG~~La~~~~~  282 (448)
T PRK04792        212 MLLRSPEPLMSPAWSPDG-RKLAYVSFENRKAEIFVQDIYTQVREK-VT-------SFPGINGAPRFSPDGKKLALVLSK  282 (448)
T ss_pred             EeecCCCcccCceECCCC-CEEEEEEecCCCcEEEEEECCCCCeEE-ec-------CCCCCcCCeeECCCCCEEEEEEeC
Confidence            344567789999999999 555544 3343  58888987765422 11       122233468999999755566666


Q ss_pred             CCc--EEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC-C--CeEEEEeCCCCceeeeeeecCCCceeEEEEeC
Q psy17682        237 DNN--VAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK-D--KKMRIINPRTGAIEEEAVCHEGSKATRAIYLK  311 (490)
Q Consensus       237 dg~--v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~  311 (490)
                      ++.  |.++|+.+++. ..+..+.......+|+|||+.|+..+. +  ..|+++|+.+++.... ..... ......|+|
T Consensus       283 ~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~L-t~~g~-~~~~~~~Sp  359 (448)
T PRK04792        283 DGQPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRL-TFEGE-QNLGGSITP  359 (448)
T ss_pred             CCCeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEE-ecCCC-CCcCeeECC
Confidence            775  77778877764 344445556678899999998877653 3  3577788887765432 21122 234568999


Q ss_pred             CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCe--EEEEEecCCCCeeEEee
Q psy17682        312 SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSV--IRYFEITAEPPFVHYIN  389 (490)
Q Consensus       312 ~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~--i~iwd~~~~~~~~~~~~  389 (490)
                      +|+.++..+.......|.++|+.++.. ..+   ..........|+|||+.|+++...++.  +++++.. ++ ....+.
T Consensus       360 DG~~l~~~~~~~g~~~I~~~dl~~g~~-~~l---t~~~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~-G~-~~~~l~  433 (448)
T PRK04792        360 DGRSMIMVNRTNGKFNIARQDLETGAM-QVL---TSTRLDESPSVAPNGTMVIYSTTYQGKQVLAAVSID-GR-FKARLP  433 (448)
T ss_pred             CCCEEEEEEecCCceEEEEEECCCCCe-EEc---cCCCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CC-ceEECc
Confidence            999888766433334677778776542 111   111123356899999999777766654  5666653 33 222232


Q ss_pred             eeeCCCceeeEEEee
Q psy17682        390 TFQTPDPQRGIGMMP  404 (490)
Q Consensus       390 ~~~~~~~i~~~~~sp  404 (490)
                        ...+.+...+|+|
T Consensus       434 --~~~g~~~~p~Wsp  446 (448)
T PRK04792        434 --AGQGEVKSPAWSP  446 (448)
T ss_pred             --CCCCCcCCCccCC
Confidence              1234567778887

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.55  E-value=5.8e-13  Score=113.90  Aligned_cols=155  Identities=14%  Similarity=0.256  Sum_probs=108.6

Q ss_pred             eEEEECCCCCCEEEEEeC---------CCcEEEEECCCCC-cccccccceeeecccccCEEEEEEeeCCCCEEEE-EeCC
Q psy17682        169 LDIAWSPHDDNVIASGSE---------DCVVKVWQIPDGG-ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLT-AGSD  237 (490)
Q Consensus       169 ~~~~~~p~~~~~l~s~~~---------dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s-~~~d  237 (490)
                      ..+.|+|+|..+++....         -|...+|.++... ....+.     +. ..++|.+++|+|++..+++. |..+
T Consensus         9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~-----l~-~~~~I~~~~WsP~g~~favi~g~~~   82 (194)
T PF08662_consen    9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIE-----LK-KEGPIHDVAWSPNGNEFAVIYGSMP   82 (194)
T ss_pred             EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceee-----cc-CCCceEEEEECcCCCEEEEEEccCC
Confidence            457899998555554441         1345666653322 112111     11 34579999999999643333 4457


Q ss_pred             CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC---CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK---DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL  314 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~  314 (490)
                      +.|.+||++ ++.+..+.  ...+..+.|+|+|++|++++.   .|.|.+||+++.+.+.+.. |.  .++.+.|+|+|+
T Consensus        83 ~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~~--~~t~~~WsPdGr  156 (194)
T PF08662_consen   83 AKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-HS--DATDVEWSPDGR  156 (194)
T ss_pred             cccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-cC--cEEEEEEcCCCC
Confidence            899999996 66676664  567889999999999999874   3679999999888877664 22  278999999999


Q ss_pred             EEEEEeCC---CceeEEEEecCCC
Q psy17682        315 IFTTGFSK---MSERQYSLRAPDH  335 (490)
Q Consensus       315 ~l~~~~~~---~~~~~i~iwd~~~  335 (490)
                      +++++...   ..|..++||+...
T Consensus       157 ~~~ta~t~~r~~~dng~~Iw~~~G  180 (194)
T PF08662_consen  157 YLATATTSPRLRVDNGFKIWSFQG  180 (194)
T ss_pred             EEEEEEeccceeccccEEEEEecC
Confidence            99988631   2367788898763

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.55  E-value=5.7e-11  Score=104.96  Aligned_cols=275  Identities=13%  Similarity=0.185  Sum_probs=185.8

Q ss_pred             CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeC---CCcEEEEECCC--CCcccccccceee
Q psy17682        136 QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSE---DCVVKVWQIPD--GGISRTLTEPVVD  210 (490)
Q Consensus       136 ~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~---dg~i~iwd~~~--~~~~~~~~~~~~~  210 (490)
                      +..|.+|++....   +++.  ...+-.+.+.++-|+|+|++ ++|.++..   +|.|-.|.++.  |+... +..  ..
T Consensus        15 s~gI~v~~ld~~~---g~l~--~~~~v~~~~nptyl~~~~~~-~~LY~v~~~~~~ggvaay~iD~~~G~Lt~-ln~--~~   85 (346)
T COG2706          15 SQGIYVFNLDTKT---GELS--LLQLVAELGNPTYLAVNPDQ-RHLYVVNEPGEEGGVAAYRIDPDDGRLTF-LNR--QT   85 (346)
T ss_pred             CCceEEEEEeCcc---cccc--hhhhccccCCCceEEECCCC-CEEEEEEecCCcCcEEEEEEcCCCCeEEE-eec--cc
Confidence            5678888886222   2221  11233567889999999987 77877754   57888888775  44322 111  01


Q ss_pred             ecccccCEEEEEEeeCCCCEEEEEe-CCCcEEEEECCC-Cee---EEEEecCCCc----------EEEEEEcCCCCEEEE
Q psy17682        211 LLYHQRRVGLVLWHPTAQNVLLTAG-SDNNVAIWNVGT-GEI---MIQIECHPDI----------VYSASWNWDGSKLLT  275 (490)
Q Consensus       211 ~~~~~~~v~~~~~~p~~~~~l~s~~-~dg~v~iwd~~~-~~~---~~~~~~~~~~----------v~~~~~~~~~~~l~~  275 (490)
                      +  ...+-..++.+++++ +++++. ..|.|.++.++. |.+   +..+. |.+.          +....+.|++++|++
T Consensus        86 ~--~g~~p~yvsvd~~g~-~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~-h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v  161 (346)
T COG2706          86 L--PGSPPCYVSVDEDGR-FVFVANYHSGSVSVYPLQADGSLQPVVQVVK-HTGSGPHERQESPHVHSANFTPDGRYLVV  161 (346)
T ss_pred             c--CCCCCeEEEECCCCC-EEEEEEccCceEEEEEcccCCccccceeeee-cCCCCCCccccCCccceeeeCCCCCEEEE
Confidence            1  223338899999997 555554 468999999975 432   22232 4444          888999999999998


Q ss_pred             EeC-CCeEEEEeCCCCceeeee--eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe-EEE-------e
Q psy17682        276 TCK-DKKMRIINPRTGAIEEEA--VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI-VMV-------E  344 (490)
Q Consensus       276 ~~~-dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~-~~~-------~  344 (490)
                      ..- -..|.+|++..++....-  ....+.-.+.++|+|++++..+-.+  -+++|.+|......... .++       .
T Consensus       162 ~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~E--L~stV~v~~y~~~~g~~~~lQ~i~tlP~d  239 (346)
T COG2706         162 PDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNE--LNSTVDVLEYNPAVGKFEELQTIDTLPED  239 (346)
T ss_pred             eecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEec--cCCEEEEEEEcCCCceEEEeeeeccCccc
Confidence            863 356999999977643322  1233444899999999998877664  57889999888642211 111       1


Q ss_pred             ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC-CceeeEEEeeCceeEEee---cceeEEEE
Q psy17682        345 LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP-DPQRGIGMMPKRGCDVNS---CEIGRFFR  420 (490)
Q Consensus       345 ~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~---~~~~~~~~  420 (490)
                      +........+..++||++|+++--....|.+|.+......+..+...... ..-+.+.|+|.+.+|++.   ++.+.+|.
T Consensus       240 F~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~  319 (346)
T COG2706         240 FTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFE  319 (346)
T ss_pred             cCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEE
Confidence            23445678889999999999887666789999998765445555444433 347999999999998887   44778888


Q ss_pred             ecCCC
Q psy17682        421 LNNSG  425 (490)
Q Consensus       421 ~~~~~  425 (490)
                      .+...
T Consensus       320 ~d~~T  324 (346)
T COG2706         320 RDKET  324 (346)
T ss_pred             EcCCC
Confidence            77644

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.54  E-value=1.5e-11  Score=118.93  Aligned_cols=227  Identities=10%  Similarity=0.040  Sum_probs=138.1

Q ss_pred             cccCCeeEEEECCCCCC--EEEEEeCCC--cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC
Q psy17682        163 GHKGPVLDIAWSPHDDN--VIASGSEDC--VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN  238 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~--~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg  238 (490)
                      .....+.+-+|+|||..  ++++...+|  .|.+.++.+++....        ....+.....+|+|||+.++++...+|
T Consensus       182 ~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~l--------t~~~g~~~~p~wSPDG~~Laf~s~~~g  253 (428)
T PRK01029        182 QEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKI--------LALQGNQLMPTFSPRKKLLAFISDRYG  253 (428)
T ss_pred             cCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEe--------ecCCCCccceEECCCCCEEEEEECCCC
Confidence            34556778899999854  333555544  467778776654221        113344567899999974544443333


Q ss_pred             ----cEEEEECCCC---eeEEEEecCCCcEEEEEEcCCCCEEEEEe-CCCe--EEEEeCCC-CceeeeeeecCCCceeEE
Q psy17682        239 ----NVAIWNVGTG---EIMIQIECHPDIVYSASWNWDGSKLLTTC-KDKK--MRIINPRT-GAIEEEAVCHEGSKATRA  307 (490)
Q Consensus       239 ----~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~--i~iwd~~~-~~~~~~~~~~~~~~~~~~  307 (490)
                          .+.+|++..+   +...............+|+|||+.|+..+ .+|.  |+++++.. +.....+..... .+...
T Consensus       254 ~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~-~~~~p  332 (428)
T PRK01029        254 NPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYR-NSSCP  332 (428)
T ss_pred             CcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCC-Cccce
Confidence                3444676642   33333332233456789999999887766 4564  55555542 222333333333 36778


Q ss_pred             EEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecC--CCeEEEEEecCCCCee
Q psy17682        308 IYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKG--DSVIRYFEITAEPPFV  385 (490)
Q Consensus       308 ~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~--dg~i~iwd~~~~~~~~  385 (490)
                      .|+|||+.|+..........|.+||+.+++... +.  .....+..+.|+|||+.|++++..  ...|+++|+..++.  
T Consensus       333 ~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt--~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~--  407 (428)
T PRK01029        333 AWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ-LT--TSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKT--  407 (428)
T ss_pred             eECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-cc--CCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCE--
Confidence            999999988876644335679999998765322 11  122346778999999998766543  35688888877752  


Q ss_pred             EEeeeeeCCCceeeEEEeeC
Q psy17682        386 HYINTFQTPDPQRGIGMMPK  405 (490)
Q Consensus       386 ~~~~~~~~~~~i~~~~~sp~  405 (490)
                      +.+.  .....+...+|+|-
T Consensus       408 ~~Lt--~~~g~~~~p~Ws~~  425 (428)
T PRK01029        408 RKIV--IGSGEKRFPSWGAF  425 (428)
T ss_pred             EEee--cCCCcccCceecCC
Confidence            2222  23345677888875

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.54  E-value=2.4e-12  Score=125.11  Aligned_cols=178  Identities=14%  Similarity=0.163  Sum_probs=111.1

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECC--CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIP--DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN  244 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd  244 (490)
                      .+.+.+|+|+|..++++.+.+|...||.++  .+. ...       +..+........|+|+|+.+++++..++...+|.
T Consensus       241 ~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~-------lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~  312 (427)
T PRK02889        241 SNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRR-------LTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYR  312 (427)
T ss_pred             CccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEE-------CCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEE
Confidence            445789999995455577888887777653  332 222       2224455677899999974444444456666665


Q ss_pred             C--CCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCC---eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682        245 V--GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK---KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG  319 (490)
Q Consensus       245 ~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~  319 (490)
                      +  .+++. ..+..........+|+|+|++|+..+.++   .|++||+.+++... +... . ......|+|||+.|+..
T Consensus       313 ~~~~~g~~-~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~~-~-~~~~p~~spdg~~l~~~  388 (427)
T PRK02889        313 MPASGGAA-QRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTA-LTDT-T-RDESPSFAPNGRYILYA  388 (427)
T ss_pred             EECCCCce-EEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEE-ccCC-C-CccCceECCCCCEEEEE
Confidence            4  44443 22222233345688999999998877654   69999998876543 3222 1 24567899999998887


Q ss_pred             eCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCC
Q psy17682        320 FSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPD  359 (490)
Q Consensus       320 ~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~  359 (490)
                      +.++....+.+.+... .....+.  .+...+..++|+|-
T Consensus       389 ~~~~g~~~l~~~~~~g-~~~~~l~--~~~g~~~~p~wsp~  425 (427)
T PRK02889        389 TQQGGRSVLAAVSSDG-RIKQRLS--VQGGDVREPSWGPF  425 (427)
T ss_pred             EecCCCEEEEEEECCC-CceEEee--cCCCCCCCCccCCC
Confidence            7554455677777753 3222221  23345677788874

>KOG2111|consensus

Probab=99.54  E-value=1.6e-11  Score=106.04  Aligned_cols=240  Identities=10%  Similarity=0.123  Sum_probs=158.0

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeeccccc--CEEEEEEeeCCCCEEEEEeCC------C
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQR--RVGLVLWHPTAQNVLLTAGSD------N  238 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~p~~~~~l~s~~~d------g  238 (490)
                      ...+++|+.|. ..++.|.++| .+||+.+.-+....-.       .+.+  .+.-+-|-.+  .+.++||.+      .
T Consensus         7 ~~lsvs~NQD~-ScFava~~~G-friyn~~P~ke~~~r~-------~~~~G~~~veMLfR~N--~laLVGGg~~pky~pN   75 (346)
T KOG2111|consen    7 KTLSVSFNQDH-SCFAVATDTG-FRIYNCDPFKESASRQ-------FIDGGFKIVEMLFRSN--YLALVGGGSRPKYPPN   75 (346)
T ss_pred             ceeEEEEccCC-ceEEEEecCc-eEEEecCchhhhhhhc-------cccCchhhhhHhhhhc--eEEEecCCCCCCCCCc
Confidence            34459999877 6777777664 8999987533321111       0222  2222333221  233444433      4


Q ss_pred             cEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCceeeeeeecCCC-ceeEEEEeCCCcEE
Q psy17682        239 NVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPR-TGAIEEEAVCHEGS-KATRAIYLKSGLIF  316 (490)
Q Consensus       239 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~-~~~~~~~s~~~~~l  316 (490)
                      .|.|||=....++.++. ...+|.++.+.++  .|++.- .+.|++|... +.+.+..+....++ ..+++.-..+..+|
T Consensus        76 kviIWDD~k~~~i~el~-f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~L  151 (346)
T KOG2111|consen   76 KVIIWDDLKERCIIELS-FNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLL  151 (346)
T ss_pred             eEEEEecccCcEEEEEE-eccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEE
Confidence            79999966777888887 6788999999865  455554 5889999988 44555555532221 13333333334555


Q ss_pred             EEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC-eEEEEEecCCCCeeEEeeeeeCCC
Q psy17682        317 TTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS-VIRYFEITAEPPFVHYINTFQTPD  395 (490)
Q Consensus       317 ~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg-~i~iwd~~~~~~~~~~~~~~~~~~  395 (490)
                      |.-+.  ..|.|+|-|+..........-..|.+.|.+++.+-+|..+ |++|..| .|||||..+++.+.+..... .+.
T Consensus       152 afPg~--k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~v-ATaStkGTLIRIFdt~~g~~l~E~RRG~-d~A  227 (346)
T KOG2111|consen  152 AFPGF--KTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLV-ATASTKGTLIRIFDTEDGTLLQELRRGV-DRA  227 (346)
T ss_pred             EcCCC--ccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEE-EEeccCcEEEEEEEcCCCcEeeeeecCC-chh
Confidence            55443  5689999999875542122333688899999999999998 8888887 57899999998554433322 335


Q ss_pred             ceeeEEEeeCceeEEeecc--eeEEEEecCCC
Q psy17682        396 PQRGIGMMPKRGCDVNSCE--IGRFFRLNNSG  425 (490)
Q Consensus       396 ~i~~~~~sp~~~~l~~~~~--~~~~~~~~~~~  425 (490)
                      .|.+++|||+..+++++++  ++.+|.+....
T Consensus       228 ~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~  259 (346)
T KOG2111|consen  228 DIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTE  259 (346)
T ss_pred             eEEEEEeCCCccEEEEEcCCCeEEEEEeecCC
Confidence            7999999999999988865  77888887643

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.53  E-value=6.9e-12  Score=122.57  Aligned_cols=204  Identities=14%  Similarity=0.246  Sum_probs=134.8

Q ss_pred             ceeecccCCeeEEEECCCCCCEEEEEeCC---CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe
Q psy17682        159 ALVGGHKGPVLDIAWSPHDDNVIASGSED---CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG  235 (490)
Q Consensus       159 ~~~~~h~~~V~~~~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~  235 (490)
                      +.+..+...+.+.+|+|+| ++|+.+..+   ..|.+||+.+++...        +..+...+.+++|+|+++.++++.+
T Consensus       183 ~~l~~~~~~~~~p~~Spdg-~~la~~~~~~~~~~i~v~d~~~g~~~~--------~~~~~~~~~~~~~spDg~~l~~~~~  253 (417)
T TIGR02800       183 QTITRSREPILSPAWSPDG-QKLAYVSFESGKPEIYVQDLATGQREK--------VASFPGMNGAPAFSPDGSKLAVSLS  253 (417)
T ss_pred             EEeecCCCceecccCCCCC-CEEEEEEcCCCCcEEEEEECCCCCEEE--------eecCCCCccceEECCCCCEEEEEEC
Confidence            3455677789999999999 666665533   479999998775432        1224455677899999975555655


Q ss_pred             CCC--cEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC-C--eEEEEeCCCCceeeeeeecCCCceeEEEEe
Q psy17682        236 SDN--NVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD-K--KMRIINPRTGAIEEEAVCHEGSKATRAIYL  310 (490)
Q Consensus       236 ~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s  310 (490)
                      .++  .|.+||+.+++.. .+..+........|+|+|+.|+..+.. +  .|+++|+.+++.. .+..+.. ......|+
T Consensus       254 ~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~-~~~~~~~s  330 (417)
T TIGR02800       254 KDGNPDIYVMDLDGKQLT-RLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGG-YNASPSWS  330 (417)
T ss_pred             CCCCccEEEEECCCCCEE-ECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCC-CccCeEEC
Confidence            544  5888998877543 344444455677999999988776643 3  5888898877643 3332322 36778899


Q ss_pred             CCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC--eEEEEEe
Q psy17682        311 KSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS--VIRYFEI  378 (490)
Q Consensus       311 ~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg--~i~iwd~  378 (490)
                      |+|++++.+..+.....|.+||+.+... ..+   ........+.|+|+|++|+++...++  .+++.+.
T Consensus       331 pdg~~i~~~~~~~~~~~i~~~d~~~~~~-~~l---~~~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~  396 (417)
T TIGR02800       331 PDGDLIAFVHREGGGFNIAVMDLDGGGE-RVL---TDTGLDESPSFAPNGRMILYATTRGGRGVLGLVST  396 (417)
T ss_pred             CCCCEEEEEEccCCceEEEEEeCCCCCe-EEc---cCCCCCCCceECCCCCEEEEEEeCCCcEEEEEEEC
Confidence            9999988877433334789999887432 111   11223456789999999866655444  3444443

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.53  E-value=1.1e-11  Score=116.91  Aligned_cols=309  Identities=13%  Similarity=0.115  Sum_probs=180.4

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK  104 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (490)
                      +..++..+ .+.+..+..+...-..+.|+|++ ++++.++.||.|.++|+.+.+.                  ...+.. 
T Consensus        18 v~viD~~t-~~~~~~i~~~~~~h~~~~~s~Dg-r~~yv~~rdg~vsviD~~~~~~------------------v~~i~~-   76 (369)
T PF02239_consen   18 VAVIDGAT-NKVVARIPTGGAPHAGLKFSPDG-RYLYVANRDGTVSVIDLATGKV------------------VATIKV-   76 (369)
T ss_dssp             EEEEETTT--SEEEEEE-STTEEEEEE-TT-S-SEEEEEETTSEEEEEETTSSSE------------------EEEEE--
T ss_pred             EEEEECCC-CeEEEEEcCCCCceeEEEecCCC-CEEEEEcCCCeEEEEECCcccE------------------EEEEec-
Confidence            45555443 34455555544445567899999 7777788999999999998652                  111111 


Q ss_pred             CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeec-------ccCCeeEEEECCCC
Q psy17682        105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGG-------HKGPVLDIAWSPHD  177 (490)
Q Consensus       105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~-------h~~~V~~~~~~p~~  177 (490)
                           ......+++|+++  +  .++++....+.+.+++..     +.+   .++.+..       ....+.++..+|..
T Consensus        77 -----G~~~~~i~~s~DG--~--~~~v~n~~~~~v~v~D~~-----tle---~v~~I~~~~~~~~~~~~Rv~aIv~s~~~  139 (369)
T PF02239_consen   77 -----GGNPRGIAVSPDG--K--YVYVANYEPGTVSVIDAE-----TLE---PVKTIPTGGMPVDGPESRVAAIVASPGR  139 (369)
T ss_dssp             -----SSEEEEEEE--TT--T--EEEEEEEETTEEEEEETT-----T-----EEEEEE--EE-TTTS---EEEEEE-SSS
T ss_pred             -----CCCcceEEEcCCC--C--EEEEEecCCCceeEeccc-----ccc---ceeecccccccccccCCCceeEEecCCC
Confidence                 1134678888885  2  234556678899999875     221   2222221       24567888888877


Q ss_pred             CCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe--
Q psy17682        178 DNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE--  255 (490)
Q Consensus       178 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--  255 (490)
                      ..++++--+.+.|.+-|..+.+....      .............|.|+++.++++...++.|-++|.++++.+..+.  
T Consensus       140 ~~fVv~lkd~~~I~vVdy~d~~~~~~------~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g  213 (369)
T PF02239_consen  140 PEFVVNLKDTGEIWVVDYSDPKNLKV------TTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTG  213 (369)
T ss_dssp             SEEEEEETTTTEEEEEETTTSSCEEE------EEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-S
T ss_pred             CEEEEEEccCCeEEEEEeccccccce------eeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeecc
Confidence            33444444457887778766543221      1112445677899999997555656667899999999998777654  


Q ss_pred             --cCCCcEEEEE-------EcC--CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEe-CCC
Q psy17682        256 --CHPDIVYSAS-------WNW--DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGF-SKM  323 (490)
Q Consensus       256 --~~~~~v~~~~-------~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~-~~~  323 (490)
                        .|..+...+-       |..  .+...++.-..+.+.+||..+.+.++++....+.  .-+..+|+++++.+.. ...
T Consensus       214 ~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g--lFi~thP~s~~vwvd~~~~~  291 (369)
T PF02239_consen  214 KKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG--LFIKTHPDSRYVWVDTFLNP  291 (369)
T ss_dssp             SSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS----EE--TT-SEEEEE-TT-S
T ss_pred             ccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCc--ceeecCCCCccEEeeccCCC
Confidence              2333333321       221  2233323333345667999999999999865442  6677899999998871 111


Q ss_pred             ceeEEEEecCCCCCCCeEEEecc--CCCceeeeeecCCCCeEEEEecCCC-eEEEEEecCCC
Q psy17682        324 SERQYSLRAPDHLDEPIVMVELD--TSNGVMFPLYDPDTNLVYLCGKGDS-VIRYFEITAEP  382 (490)
Q Consensus       324 ~~~~i~iwd~~~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~g~~dg-~i~iwd~~~~~  382 (490)
                      ..+.|.++|.++.+   ....+.  ....+..+.|+++|++++++.-.++ .|.+||..+.+
T Consensus       292 ~~~~v~viD~~tl~---~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~  350 (369)
T PF02239_consen  292 DADTVQVIDKKTLK---VVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLK  350 (369)
T ss_dssp             SHT-EEEEECCGTE---EEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTE
T ss_pred             CCceEEEEECcCcc---eeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcE
Confidence            36899999999863   223332  2234899999999999988876555 89999999986

...

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.49  E-value=4.5e-10  Score=106.11  Aligned_cols=257  Identities=12%  Similarity=0.126  Sum_probs=156.3

Q ss_pred             CeeEeccccccceEEEEEeeC-CCceEEEECCCCCCCCc-ccCCCCcceeecccCCeeEEEECCCCCCEEEEE-eCCCcE
Q psy17682        114 NEITISEDYVKEFKEEIRKLK-SQQALSILPPPSTAPNT-GRINADHALVGGHKGPVLDIAWSPHDDNVIASG-SEDCVV  190 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~-~~g~i~v~~~~~~~~~~-~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~-~~dg~i  190 (490)
                      .-++++|+.  +++-...... ..+.|..|.+.    .. +.+. .+............++++|++ .+|+++ ..+|.|
T Consensus        40 s~l~~~~~~--~~LY~~~e~~~~~g~v~~~~i~----~~~g~L~-~~~~~~~~g~~p~~i~~~~~g-~~l~vany~~g~v  111 (345)
T PF10282_consen   40 SWLAVSPDG--RRLYVVNEGSGDSGGVSSYRID----PDTGTLT-LLNSVPSGGSSPCHIAVDPDG-RFLYVANYGGGSV  111 (345)
T ss_dssp             CCEEE-TTS--SEEEEEETTSSTTTEEEEEEEE----TTTTEEE-EEEEEEESSSCEEEEEECTTS-SEEEEEETTTTEE
T ss_pred             ceEEEEeCC--CEEEEEEccccCCCCEEEEEEC----CCcceeE-EeeeeccCCCCcEEEEEecCC-CEEEEEEccCCeE
Confidence            456676663  3222222222 57888888876    22 2222 122222233455678999998 555555 568999


Q ss_pred             EEEECCCCCcccccccceeee--------cccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe--e--EEEEe-cC
Q psy17682        191 KVWQIPDGGISRTLTEPVVDL--------LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE--I--MIQIE-CH  257 (490)
Q Consensus       191 ~iwd~~~~~~~~~~~~~~~~~--------~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~--~--~~~~~-~~  257 (490)
                      .++++.....+..... ....        ........++.|+|+++.++++.-....|.+|++....  .  ...+. ..
T Consensus       112 ~v~~l~~~g~l~~~~~-~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~  190 (345)
T PF10282_consen  112 SVFPLDDDGSLGEVVQ-TVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPP  190 (345)
T ss_dssp             EEEEECTTSEEEEEEE-EEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECST
T ss_pred             EEEEccCCcccceeee-ecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeecccccc
Confidence            9999987433322111 0000        11234578999999997444444445689999997654  2  12222 34


Q ss_pred             CCcEEEEEEcCCCCEEEEEe-CCCeEEEEeCC--CCce--eeeeee----cC-CCceeEEEEeCCCcEEEEEeCCCceeE
Q psy17682        258 PDIVYSASWNWDGSKLLTTC-KDKKMRIINPR--TGAI--EEEAVC----HE-GSKATRAIYLKSGLIFTTGFSKMSERQ  327 (490)
Q Consensus       258 ~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~--~~~~--~~~~~~----~~-~~~~~~~~~s~~~~~l~~~~~~~~~~~  327 (490)
                      ......++|+|+++++.+.. .+++|.++++.  ++..  +.....    .. ......++++|||++|.++..  ....
T Consensus       191 G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr--~~~s  268 (345)
T PF10282_consen  191 GSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNR--GSNS  268 (345)
T ss_dssp             TSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEEC--TTTE
T ss_pred             CCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEec--cCCE
Confidence            56688999999998776665 57889999988  3422  222221    11 113788999999999888764  4678


Q ss_pred             EEEecCCCC-CCCeEEEeccC-CCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        328 YSLRAPDHL-DEPIVMVELDT-SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       328 i~iwd~~~~-~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      |.+|+++.. ........... ......++++|+|++|+++...++.|.+|++...
T Consensus       269 I~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~  324 (345)
T PF10282_consen  269 ISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPD  324 (345)
T ss_dssp             EEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETT
T ss_pred             EEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCC
Confidence            999999543 22222333222 3347889999999999888888899999998643

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG2315|consensus

Probab=99.44  E-value=4.6e-10  Score=104.31  Aligned_cols=259  Identities=13%  Similarity=0.137  Sum_probs=163.7

Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCC-CEEEE-----EeCC
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDD-NVIAS-----GSED  187 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~-~~l~s-----~~~d  187 (490)
                      ++..|+.|.      .+++-...+.+.+|++..       ....  .-.-|...|..+.++|.+. ..+|+     .|.=
T Consensus       129 W~~qfs~dE------sl~arlv~nev~f~~~~~-------f~~~--~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaP  193 (566)
T KOG2315|consen  129 WVPQFSIDE------SLAARLVSNEVQFYDLGS-------FKTI--QHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAP  193 (566)
T ss_pred             cccccccch------hhhhhhhcceEEEEecCC-------ccce--eeeeeccceeeEEecCCCCCceEEEEccCCCCCC
Confidence            455666653      344445567788887752       1111  1234678899999999633 34443     3455


Q ss_pred             CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC--C---------CcEEEEECCCCeeEEEEec
Q psy17682        188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS--D---------NNVAIWNVGTGEIMIQIEC  256 (490)
Q Consensus       188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--d---------g~v~iwd~~~~~~~~~~~~  256 (490)
                      +.++||..........+..  ..+  ....=..+.|++-|.-+|+.++.  |         .++++.+++..+....+. 
T Consensus       194 a~vri~~~~~~~~~~~~a~--ksF--Fkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~-  268 (566)
T KOG2315|consen  194 ASVRIYKYPEEGQHQPVAN--KSF--FKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLL-  268 (566)
T ss_pred             cEEEEeccccccccchhhh--ccc--cccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecC-
Confidence            6899998763322221111  111  22223467898887666665543  2         257777777444444444 


Q ss_pred             CCCcEEEEEEcCCCCEEEEE--eCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCC
Q psy17682        257 HPDIVYSASWNWDGSKLLTT--CKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPD  334 (490)
Q Consensus       257 ~~~~v~~~~~~~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~  334 (490)
                      ..++|.++.|+|+++.++++  -.-..+.|||++ +.++..+.  .+ +-.++.|+|.|++++.++-..-.|.+-+||..
T Consensus       269 k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~--eg-pRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~  344 (566)
T KOG2315|consen  269 KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFP--EG-PRNTAFFNPHGNIILLAGFGNLPGDMEVWDVP  344 (566)
T ss_pred             CCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCC--CC-CccceEECCCCCEEEEeecCCCCCceEEEecc
Confidence            57899999999999876654  456789999988 45554443  33 36788999999988877655567899999999


Q ss_pred             CCCCCeEEEeccCCCceeeeeecCCCCeEEEEecC-----CCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeC
Q psy17682        335 HLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKG-----DSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPK  405 (490)
Q Consensus       335 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~  405 (490)
                      +.++.....    ...-+-+.|+|||++++.+.+.     |+.++||++....-..   ..+..  ....+.|-|-
T Consensus       345 n~K~i~~~~----a~~tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~l~~---~~f~s--EL~qv~W~P~  411 (566)
T KOG2315|consen  345 NRKLIAKFK----AANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSLLHE---KMFKS--ELLQVEWRPF  411 (566)
T ss_pred             chhhccccc----cCCceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCceeeh---hhhhH--hHhheeeeec
Confidence            855433222    2345678999999998544433     7889999997653111   11111  3677788764

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.43  E-value=2e-10  Score=111.16  Aligned_cols=221  Identities=10%  Similarity=0.016  Sum_probs=131.0

Q ss_pred             cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCE--EEEEeCCC--cEEEEECCCCeeEEEEecCCCcEEEE
Q psy17682        189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNV--LLTAGSDN--NVAIWNVGTGEIMIQIECHPDIVYSA  264 (490)
Q Consensus       189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~--l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~  264 (490)
                      .|.+.|...+.. +.+       ......+.+-.|+|+|+.+  +++...+|  .|.+.++..++... +....+.....
T Consensus       166 ~l~~~d~dG~~~-~~l-------t~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~-lt~~~g~~~~p  236 (428)
T PRK01029        166 ELWSVDYDGQNL-RPL-------TQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKK-ILALQGNQLMP  236 (428)
T ss_pred             eEEEEcCCCCCc-eEc-------ccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceE-eecCCCCccce
Confidence            566667654432 222       2245566788999998642  23444443  57788888776433 33344555678


Q ss_pred             EEcCCCCEEEEEeC-CC----eEEEEeCCCC---ceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC
Q psy17682        265 SWNWDGSKLLTTCK-DK----KMRIINPRTG---AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL  336 (490)
Q Consensus       265 ~~~~~~~~l~~~~~-dg----~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~  336 (490)
                      +|+|||+.|+..+. +|    .+.+|++..+   +......... .......|+|||+.|+..++......|.++++...
T Consensus       237 ~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~-~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~  315 (428)
T PRK01029        237 TFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAF-GTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPE  315 (428)
T ss_pred             EECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCC-CCcCCeEECCCCCEEEEEECCCCCceEEEEECccc
Confidence            99999998887653 22    3444777653   2222222222 22467899999998887764322334555555422


Q ss_pred             -CCCeEEEeccCCCceeeeeecCCCCeEEEEecCC--CeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-
Q psy17682        337 -DEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD--SVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-  412 (490)
Q Consensus       337 -~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-  412 (490)
                       ..+..+.  .....+..+.|||||+.|++++..+  ..|.+||+.+++.  +.+.  .....+....|+|||+.++.. 
T Consensus       316 g~~~~~lt--~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~--~~Lt--~~~~~~~~p~wSpDG~~L~f~~  389 (428)
T PRK01029        316 GQSPRLLT--KKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRD--YQLT--TSPENKESPSWAIDSLHLVYSA  389 (428)
T ss_pred             ccceEEec--cCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCe--EEcc--CCCCCccceEECCCCCEEEEEE
Confidence             2111111  2224567889999999996665443  4789999988862  2232  222356789999999876643 


Q ss_pred             c----ceeEEEEecCCC
Q psy17682        413 C----EIGRFFRLNNSG  425 (490)
Q Consensus       413 ~----~~~~~~~~~~~~  425 (490)
                      .    ..+.++++..+.
T Consensus       390 ~~~g~~~L~~vdl~~g~  406 (428)
T PRK01029        390 GNSNESELYLISLITKK  406 (428)
T ss_pred             CCCCCceEEEEECCCCC
Confidence            1    234455555554

>KOG4547|consensus

Probab=99.43  E-value=3.1e-11  Score=112.74  Aligned_cols=146  Identities=16%  Similarity=0.199  Sum_probs=125.3

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCC
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHP  258 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~  258 (490)
                      ..++-|...|.|.+|++..++....+.     -..|.++|.++.++.+-. .|.+++.|+.+..|+....+.++..++..
T Consensus        71 ~~lvlgt~~g~v~~ys~~~g~it~~~s-----t~~h~~~v~~~~~~~~~~-ciyS~~ad~~v~~~~~~~~~~~~~~~~~~  144 (541)
T KOG4547|consen   71 SMLVLGTPQGSVLLYSVAGGEITAKLS-----TDKHYGNVNEILDAQRLG-CIYSVGADLKVVYILEKEKVIIRIWKEQK  144 (541)
T ss_pred             eEEEeecCCccEEEEEecCCeEEEEEe-----cCCCCCcceeeecccccC-ceEecCCceeEEEEecccceeeeeeccCC
Confidence            678889999999999999888766654     345999999999998875 89999999999999999999999999888


Q ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC-----CcEEEEEeCCCceeEEEEecC
Q psy17682        259 DIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS-----GLIFTTGFSKMSERQYSLRAP  333 (490)
Q Consensus       259 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~-----~~~l~~~~~~~~~~~i~iwd~  333 (490)
                      ..+.+++.+||+..+++++  +.|++||+++++.+.++.+|.+. ++++.|.-+     |.++.++..  .+..+.+|-.
T Consensus       145 ~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~-v~t~~f~~~~~g~~G~~vLssa~--~~r~i~~w~v  219 (541)
T KOG4547|consen  145 PLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSP-VRTLSFTTLIDGIIGKYVLSSAA--AERGITVWVV  219 (541)
T ss_pred             CccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcc-eEEEEEEEeccccccceeeeccc--cccceeEEEE
Confidence            9999999999999999887  78999999999999999999885 999998766     777776653  3556667765


Q ss_pred             CC
Q psy17682        334 DH  335 (490)
Q Consensus       334 ~~  335 (490)
                      +.
T Consensus       220 ~~  221 (541)
T KOG4547|consen  220 EK  221 (541)
T ss_pred             Ec
Confidence            54

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.43  E-value=1.2e-10  Score=114.03  Aligned_cols=205  Identities=13%  Similarity=0.139  Sum_probs=132.7

Q ss_pred             cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC---CcEEEEECCCCeeEEEEecCCCcEEEEE
Q psy17682        189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD---NNVAIWNVGTGEIMIQIECHPDIVYSAS  265 (490)
Q Consensus       189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~v~~~~  265 (490)
                      .|.++|.+.+.. +.       +..+...+....|+|+|+ .|+..+.+   ..|.+||+.+++... +....+.+....
T Consensus       180 ~l~~~d~~g~~~-~~-------l~~~~~~~~~p~wSpDG~-~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~  249 (430)
T PRK00178        180 TLQRSDYDGARA-VT-------LLQSREPILSPRWSPDGK-RIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPA  249 (430)
T ss_pred             EEEEECCCCCCc-eE-------EecCCCceeeeeECCCCC-EEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeE
Confidence            477777654432 22       223677889999999996 55554432   368999998876543 332344456789


Q ss_pred             EcCCCCEEEE-EeCCC--eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE
Q psy17682        266 WNWDGSKLLT-TCKDK--KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM  342 (490)
Q Consensus       266 ~~~~~~~l~~-~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~  342 (490)
                      |+|||+.|+. .+.+|  .|++||+.+++... +..+.. ......|+|||+.++..++......|+++++.+++.. .+
T Consensus       250 ~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~-lt~~~~-~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~-~l  326 (430)
T PRK00178        250 WSPDGSKLAFVLSKDGNPEIYVMDLASRQLSR-VTNHPA-IDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAE-RV  326 (430)
T ss_pred             ECCCCCEEEEEEccCCCceEEEEECCCCCeEE-cccCCC-CcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEE-Ee
Confidence            9999998874 44444  68899999876543 333332 3566789999998877765434557888888765422 12


Q ss_pred             EeccCCCceeeeeecCCCCeEEEEecCCC--eEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec
Q psy17682        343 VELDTSNGVMFPLYDPDTNLVYLCGKGDS--VIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC  413 (490)
Q Consensus       343 ~~~~~~~~i~~~~~s~~~~~l~~~g~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~  413 (490)
                      . .. ........|+|||+.|+++...++  .|.++|+.+++.  +.+..   ........|+|||+.++...
T Consensus       327 t-~~-~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~--~~lt~---~~~~~~p~~spdg~~i~~~~  392 (430)
T PRK00178        327 T-FV-GNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV--RILTD---TSLDESPSVAPNGTMLIYAT  392 (430)
T ss_pred             e-cC-CCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCE--EEccC---CCCCCCceECCCCCEEEEEE
Confidence            1 11 123446789999999977665444  578889888752  23321   11233568999998877653

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.41  E-value=6.7e-09  Score=92.10  Aligned_cols=214  Identities=10%  Similarity=0.082  Sum_probs=140.9

Q ss_pred             eEEEECCCCCCEEEEE-eCCCcEEEEECCCCCcccccccceeeecccccC----------EEEEEEeeCCCCEEEEEeC-
Q psy17682        169 LDIAWSPHDDNVIASG-SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRR----------VGLVLWHPTAQNVLLTAGS-  236 (490)
Q Consensus       169 ~~~~~~p~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~----------v~~~~~~p~~~~~l~s~~~-  236 (490)
                      .-++++++| ++++++ ...|.|.++-++....+...   .. ...|.+.          +....+.|+++ +|++... 
T Consensus        92 ~yvsvd~~g-~~vf~AnY~~g~v~v~p~~~dG~l~~~---v~-~~~h~g~~p~~rQ~~~h~H~a~~tP~~~-~l~v~DLG  165 (346)
T COG2706          92 CYVSVDEDG-RFVFVANYHSGSVSVYPLQADGSLQPV---VQ-VVKHTGSGPHERQESPHVHSANFTPDGR-YLVVPDLG  165 (346)
T ss_pred             eEEEECCCC-CEEEEEEccCceEEEEEcccCCccccc---ee-eeecCCCCCCccccCCccceeeeCCCCC-EEEEeecC
Confidence            778999988 566665 45688999998664332221   11 2224444          88999999996 6666543 


Q ss_pred             CCcEEEEECCCCeeEEEEe---cCCCcEEEEEEcCCCCEEEEEe-CCCeEEEEeCCCC-ceeeeeee--------cCCCc
Q psy17682        237 DNNVAIWNVGTGEIMIQIE---CHPDIVYSASWNWDGSKLLTTC-KDKKMRIINPRTG-AIEEEAVC--------HEGSK  303 (490)
Q Consensus       237 dg~v~iwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~-~~~~~~~~--------~~~~~  303 (490)
                      -..|.+|++..|+....-.   .....-..|.|+|++++....+ -+++|-+|..... .....++.        .....
T Consensus       166 ~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~  245 (346)
T COG2706         166 TDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNW  245 (346)
T ss_pred             CceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCc
Confidence            3579999999776432211   2455678999999999877666 4889999988763 22222221        11223


Q ss_pred             eeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC--CceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        304 ATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS--NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       304 ~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~--~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      ...+..+++|++|.++..  ....|.++.+......+.+......  ..-....|++.|++|++++-.+..|.+|.....
T Consensus       246 ~aaIhis~dGrFLYasNR--g~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~  323 (346)
T COG2706         246 AAAIHISPDGRFLYASNR--GHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKE  323 (346)
T ss_pred             eeEEEECCCCCEEEEecC--CCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCC
Confidence            677889999999988753  2447888887765443443332222  225678899999999888877778999998865


Q ss_pred             CCeeEEeee
Q psy17682        382 PPFVHYINT  390 (490)
Q Consensus       382 ~~~~~~~~~  390 (490)
                      .-.+..+..
T Consensus       324 TG~L~~~~~  332 (346)
T COG2706         324 TGRLTLLGR  332 (346)
T ss_pred             CceEEeccc
Confidence            433444433

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.39  E-value=1.5e-10  Score=113.10  Aligned_cols=205  Identities=13%  Similarity=0.165  Sum_probs=132.9

Q ss_pred             CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC---CcEEEEECCCCeeEEEEecCCCcEEEE
Q psy17682        188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD---NNVAIWNVGTGEIMIQIECHPDIVYSA  264 (490)
Q Consensus       188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~v~~~  264 (490)
                      ..|.++|...... +.       +..+...+.+..|+|+|+ .|+.+..+   ..|++||+.+++... +..+...+.++
T Consensus       170 ~~l~~~d~~g~~~-~~-------l~~~~~~~~~p~~Spdg~-~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~  239 (417)
T TIGR02800       170 YELQVADYDGANP-QT-------ITRSREPILSPAWSPDGQ-KLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAP  239 (417)
T ss_pred             ceEEEEcCCCCCC-EE-------eecCCCceecccCCCCCC-EEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccce
Confidence            3577777643322 22       223666788999999996 66655543   479999998876543 33355667789


Q ss_pred             EEcCCCCEEEEE-eCCC--eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeE
Q psy17682        265 SWNWDGSKLLTT-CKDK--KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIV  341 (490)
Q Consensus       265 ~~~~~~~~l~~~-~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~  341 (490)
                      +|+|+|+.|+.. +.++  .|++||+.++.... +..+.. ......|+|+|+.|+..++......|+++|+.+... ..
T Consensus       240 ~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~-~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~-~~  316 (417)
T TIGR02800       240 AFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTR-LTNGPG-IDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEV-RR  316 (417)
T ss_pred             EECCCCCEEEEEECCCCCccEEEEECCCCCEEE-CCCCCC-CCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCE-EE
Confidence            999999877654 4443  59999998776433 333332 245678999999887776543445788888876542 11


Q ss_pred             EEeccCCCceeeeeecCCCCeEEEEecCCC--eEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee
Q psy17682        342 MVELDTSNGVMFPLYDPDTNLVYLCGKGDS--VIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS  412 (490)
Q Consensus       342 ~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~  412 (490)
                      +.  ........+.|+|+|++++++....+  .|.+||+.++.  .+.+.   ........+|+||+..++..
T Consensus       317 l~--~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~--~~~l~---~~~~~~~p~~spdg~~l~~~  382 (417)
T TIGR02800       317 LT--FRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGG--ERVLT---DTGLDESPSFAPNGRMILYA  382 (417)
T ss_pred             ee--cCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCC--eEEcc---CCCCCCCceECCCCCEEEEE
Confidence            11  22345678899999999965543332  78888887754  22222   12234567899999877655

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.38  E-value=3.1e-10  Score=110.73  Aligned_cols=205  Identities=12%  Similarity=0.117  Sum_probs=128.0

Q ss_pred             cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC--cEEEEECCCCeeEEEEecCCCcEEEEEE
Q psy17682        189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN--NVAIWNVGTGEIMIQIECHPDIVYSASW  266 (490)
Q Consensus       189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~  266 (490)
                      .|.++|...... +.       +..+...+.+..|+|+|+.++++...++  .|.+||+.+++... +....+.....+|
T Consensus       199 ~l~i~d~dG~~~-~~-------l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~w  269 (448)
T PRK04792        199 QLMIADYDGYNE-QM-------LLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRF  269 (448)
T ss_pred             EEEEEeCCCCCc-eE-------eecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeE
Confidence            566667544332 22       2236678899999999974444433333  58888998876533 2222333457899


Q ss_pred             cCCCCEEEE-EeCCCe--EEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEE
Q psy17682        267 NWDGSKLLT-TCKDKK--MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMV  343 (490)
Q Consensus       267 ~~~~~~l~~-~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~  343 (490)
                      +|||+.|+. .+.+|.  |+++|+.+++... +..+.. ......|+|||+.++..++......|.++|+.+++.. .+.
T Consensus       270 SPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~-lt~~~~-~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~-~Lt  346 (448)
T PRK04792        270 SPDGKKLALVLSKDGQPEIYVVDIATKALTR-ITRHRA-IDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVS-RLT  346 (448)
T ss_pred             CCCCCEEEEEEeCCCCeEEEEEECCCCCeEE-CccCCC-CccceEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EEe
Confidence            999997765 455564  8888998776543 333332 3677899999998877765434567888888765422 111


Q ss_pred             eccCCCceeeeeecCCCCeEEEEecCCC--eEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee
Q psy17682        344 ELDTSNGVMFPLYDPDTNLVYLCGKGDS--VIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS  412 (490)
Q Consensus       344 ~~~~~~~i~~~~~s~~~~~l~~~g~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~  412 (490)
                       .. .......+|+|||++|++++..++  .|.++|+.+++.  ..+..   ........|+|||+.++..
T Consensus       347 -~~-g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~--~~lt~---~~~d~~ps~spdG~~I~~~  410 (448)
T PRK04792        347 -FE-GEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAM--QVLTS---TRLDESPSVAPNGTMVIYS  410 (448)
T ss_pred             -cC-CCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCe--EEccC---CCCCCCceECCCCCEEEEE
Confidence             11 122345789999999977765555  445567666652  22321   1122355899999876654

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.38  E-value=2.6e-09  Score=98.41  Aligned_cols=272  Identities=12%  Similarity=0.069  Sum_probs=162.1

Q ss_pred             ceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe---------CCCcEEEEECCCCCcccccccc
Q psy17682        137 QALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS---------EDCVVKVWQIPDGGISRTLTEP  207 (490)
Q Consensus       137 g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~  207 (490)
                      +.+.+++..     ..+   .+.++..-..+- .+ ++|+++.+.++.+         .+..|.+||..+.+.+..+..|
T Consensus        27 ~~v~ViD~~-----~~~---v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p   96 (352)
T TIGR02658        27 TQVYTIDGE-----AGR---VLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELP   96 (352)
T ss_pred             ceEEEEECC-----CCE---EEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccC
Confidence            788888875     222   122232212222 24 9999955555555         5889999999999988876643


Q ss_pred             eeeecccccCEEEEEEeeCCCCEEEEEe-C-CCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy17682        208 VVDLLYHQRRVGLVLWHPTAQNVLLTAG-S-DNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRII  285 (490)
Q Consensus       208 ~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~-dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  285 (490)
                      .............++++|+|+ +|+... . +..|.+.|+.+++.+.++.- .+...-...+++. ++ +-+.||.....
T Consensus        97 ~~p~~~~~~~~~~~~ls~dgk-~l~V~n~~p~~~V~VvD~~~~kvv~ei~v-p~~~~vy~t~e~~-~~-~~~~Dg~~~~v  172 (352)
T TIGR02658        97 EGPRFLVGTYPWMTSLTPDNK-TLLFYQFSPSPAVGVVDLEGKAFVRMMDV-PDCYHIFPTANDT-FF-MHCRDGSLAKV  172 (352)
T ss_pred             CCchhhccCccceEEECCCCC-EEEEecCCCCCEEEEEECCCCcEEEEEeC-CCCcEEEEecCCc-cE-EEeecCceEEE
Confidence            221101123345789999997 555544 4 78999999999999988873 2222222333222 22 22345554443


Q ss_pred             eCCC-Cce-eeeeee-cC--CCceeEEEEeC-CCcEEEEEeCCCceeEEEEecCCCCCC----CeEEEecc------CCC
Q psy17682        286 NPRT-GAI-EEEAVC-HE--GSKATRAIYLK-SGLIFTTGFSKMSERQYSLRAPDHLDE----PIVMVELD------TSN  349 (490)
Q Consensus       286 d~~~-~~~-~~~~~~-~~--~~~~~~~~~s~-~~~~l~~~~~~~~~~~i~iwd~~~~~~----~~~~~~~~------~~~  349 (490)
                      .+.+ ++. ..+... +.  ......-.|.+ +|+++.+..    .|.|.+.|+.....    +.......      ...
T Consensus       173 ~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~----eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~  248 (352)
T TIGR02658       173 GYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTY----TGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPG  248 (352)
T ss_pred             EecCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEec----CCeEEEEecCCCcceecceeeeccccccccccCCC
Confidence            3332 221 111111 11  00011114455 788888776    59999999654321    11111111      123


Q ss_pred             ceeeeeecCCCCeEEEEec---------CCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce-eEEeec---cee
Q psy17682        350 GVMFPLYDPDTNLVYLCGK---------GDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG-CDVNSC---EIG  416 (490)
Q Consensus       350 ~i~~~~~s~~~~~l~~~g~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~---~~~  416 (490)
                      +..-++++|+++.+|+...         ..+.|.++|..+.+    .+.....+..+.+++++||++ ++...+   +.+
T Consensus       249 g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~k----vi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~V  324 (352)
T TIGR02658       249 GWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGK----RLRKIELGHEIDSINVSQDAKPLLYALSTGDKTL  324 (352)
T ss_pred             cceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCe----EEEEEeCCCceeeEEECCCCCeEEEEeCCCCCcE
Confidence            4455999999999987431         22589999999887    555555567899999999998 666553   468


Q ss_pred             EEEEecCCCceEEE
Q psy17682        417 RFFRLNNSGLCQVV  430 (490)
Q Consensus       417 ~~~~~~~~~~~~~i  430 (490)
                      .++++.+++.+..+
T Consensus       325 sViD~~t~k~i~~i  338 (352)
T TIGR02658       325 YIFDAETGKELSSV  338 (352)
T ss_pred             EEEECcCCeEEeee
Confidence            88998887745444

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG4190|consensus

Probab=99.36  E-value=5.5e-12  Score=116.44  Aligned_cols=288  Identities=14%  Similarity=0.145  Sum_probs=176.5

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      +..+.||+..|..++--.+. +-++|+++|++|++|.++...-.                                    
T Consensus       728 L~nf~GH~~~iRai~AidNE-NSFiSASkDKTVKLWSik~EgD~------------------------------------  770 (1034)
T KOG4190|consen  728 LCNFTGHQEKIRAIAAIDNE-NSFISASKDKTVKLWSIKPEGDE------------------------------------  770 (1034)
T ss_pred             eecccCcHHHhHHHHhcccc-cceeeccCCceEEEEEeccccCc------------------------------------
Confidence            44588999999999876655 78999999999999998863200                                    


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP  196 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~  196 (490)
                                                         .....+.-+++.|+.+|.++.|..+. ++++++  ||-|.+||.-
T Consensus       771 -----------------------------------~~tsaCQfTY~aHkk~i~~igfL~~l-r~i~Sc--D~giHlWDPF  812 (1034)
T KOG4190|consen  771 -----------------------------------IGTSACQFTYQAHKKPIHDIGFLADL-RSIASC--DGGIHLWDPF  812 (1034)
T ss_pred             -----------------------------------cccceeeeEhhhccCcccceeeeecc-ceeeec--cCcceeeccc
Confidence                                               00011233567899999999999866 667654  7899999987


Q ss_pred             CCCcccccccceeeecccccCEEEEEEeeC-CCCEEEEE-eCCCcEEEEECCCCeeEEEEe-----cCCCcEEEEEEcCC
Q psy17682        197 DGGISRTLTEPVVDLLYHQRRVGLVLWHPT-AQNVLLTA-GSDNNVAIWNVGTGEIMIQIE-----CHPDIVYSASWNWD  269 (490)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~-----~~~~~v~~~~~~~~  269 (490)
                      -++.+..+..    -. ..+.+..+..-++ .+.++++| +...+|+++|.+..+....++     +....+.+++..+.
T Consensus       813 igr~Laq~~d----ap-k~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~  887 (1034)
T KOG4190|consen  813 IGRLLAQMED----AP-KEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADK  887 (1034)
T ss_pred             ccchhHhhhc----Cc-ccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccC
Confidence            7766543321    01 2222333333333 23355554 678899999999988777665     23456889999999


Q ss_pred             CCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEE-ecCCCCCCCeEEEeccCC
Q psy17682        270 GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSL-RAPDHLDEPIVMVELDTS  348 (490)
Q Consensus       270 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~i-wd~~~~~~~~~~~~~~~~  348 (490)
                      |+.++++-.+|.|.+.|.++|+.+......... ...++ .|..+.++...   .+..+.+ |..-.+..  ........
T Consensus       888 GN~lAa~LSnGci~~LDaR~G~vINswrpmecd-llqla-apsdq~L~~sa---ldHslaVnWhaldgim--h~q~kppp  960 (1034)
T KOG4190|consen  888 GNKLAAALSNGCIAILDARNGKVINSWRPMECD-LLQLA-APSDQALAQSA---LDHSLAVNWHALDGIM--HLQDKPPP  960 (1034)
T ss_pred             cchhhHHhcCCcEEEEecCCCceeccCCcccch-hhhhc-CchhHHHHhhc---ccceeEeeehhcCCee--eeccCCCC
Confidence            999999999999999999999988766533321 22222 24444555443   4777777 76544321  11111111


Q ss_pred             CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC---eeEEeeeeeCCCceeeEEEeeCceeEEeecc
Q psy17682        349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP---FVHYINTFQTPDPQRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  414 (490)
                      .+..-  .-.-|.-| ++......+.+|.-.....   .+..+..-.-++..++++-.|-+.....|.+
T Consensus       961 epahf--lqsvgpSL-V~a~~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPLN~afLaGne 1026 (1034)
T KOG4190|consen  961 EPAHF--LQSVGPSL-VTAQNGNILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPLNCAFLAGNE 1026 (1034)
T ss_pred             cchhh--hhccCcee-EEeccCcEEEEEecchhhhhhhhhccccccccCCccceeeeccccchhhccCC
Confidence            11100  01124444 4555556677775432111   1112222233456788888886554455544

>KOG0974|consensus

Probab=99.35  E-value=7.6e-11  Score=116.97  Aligned_cols=202  Identities=9%  Similarity=0.105  Sum_probs=147.9

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEEC
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNV  245 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~  245 (490)
                      +.|....+.-++ ..++.+..+..+.+||...+.....+..+.....   ....-+.++++. -++++|+.-+.|.+|+.
T Consensus        88 ~wi~g~~l~~e~-k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l---~~~~~~g~s~~~-~~i~~gsv~~~iivW~~  162 (967)
T KOG0974|consen   88 DWIFGAKLFEEN-KKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTL---YSSLIIGDSAEE-LYIASGSVFGEIIVWKP  162 (967)
T ss_pred             ccccccchhhhc-ceEEEEEcCceEEEEecccCceehhcCCCceEEE---EeEEEEeccCcE-EEEEeccccccEEEEec
Confidence            444445555555 6788888889999999887766655443221111   111222334444 47889999999999998


Q ss_pred             CCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee-eeeecCCCceeEEEEeCCCcEEEEEeCCCc
Q psy17682        246 GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEE-EAVCHEGSKATRAIYLKSGLIFTTGFSKMS  324 (490)
Q Consensus       246 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~  324 (490)
                      ...+.-..+.+|.+.|.++.++.+|+++++.|.|+++|+|++.+.+... +..+|... +..+.+.|+  .+++++   .
T Consensus       163 ~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaR-vw~~~~~~n--~i~t~g---e  236 (967)
T KOG0974|consen  163 HEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSAR-VWACCFLPN--RIITVG---E  236 (967)
T ss_pred             cccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccce-eEEEEeccc--eeEEec---c
Confidence            7444334688999999999999999999999999999999999988766 55577764 888999998  666776   6


Q ss_pred             eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        325 ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       325 ~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      |.+.++|+...... . ....+....+..++..++...+ +|++.|+.+++|++...
T Consensus       237 dctcrvW~~~~~~l-~-~y~~h~g~~iw~~~~~~~~~~~-vT~g~Ds~lk~~~l~~r  290 (967)
T KOG0974|consen  237 DCTCRVWGVNGTQL-E-VYDEHSGKGIWKIAVPIGVIIK-VTGGNDSTLKLWDLNGR  290 (967)
T ss_pred             ceEEEEEeccccee-h-hhhhhhhcceeEEEEcCCceEE-EeeccCcchhhhhhhcc
Confidence            99999996654321 1 2222334568999988777666 89999999999998753

>KOG0974|consensus

Probab=99.34  E-value=5.3e-11  Score=118.05  Aligned_cols=199  Identities=16%  Similarity=0.178  Sum_probs=145.1

Q ss_pred             eeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccc
Q psy17682         46 RVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKE  125 (490)
Q Consensus        46 ~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~  125 (490)
                      .|....+.-+. ..++.+..++.+.+||...+....                  ++.+. +...-....-+.++++    
T Consensus        89 wi~g~~l~~e~-k~i~l~~~~ns~~i~d~~~~~~~~------------------~i~~~-er~~l~~~~~~g~s~~----  144 (967)
T KOG0974|consen   89 WIFGAKLFEEN-KKIALVTSRNSLLIRDSKNSSVLS------------------KIQSD-ERCTLYSSLIIGDSAE----  144 (967)
T ss_pred             cccccchhhhc-ceEEEEEcCceEEEEecccCceeh------------------hcCCC-ceEEEEeEEEEeccCc----
Confidence            34444444444 677777888899999988764211                  11110 0000001112223333    


Q ss_pred             eEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccc
Q psy17682        126 FKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLT  205 (490)
Q Consensus       126 ~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  205 (490)
                       ...++++.--+.+.+|...    ...   ... .+.||++.|..+.|+-+| .++++.|+|.++|+|++++.+...   
T Consensus       145 -~~~i~~gsv~~~iivW~~~----~dn---~p~-~l~GHeG~iF~i~~s~dg-~~i~s~SdDRsiRlW~i~s~~~~~---  211 (967)
T KOG0974|consen  145 -ELYIASGSVFGEIIVWKPH----EDN---KPI-RLKGHEGSIFSIVTSLDG-RYIASVSDDRSIRLWPIDSREVLG---  211 (967)
T ss_pred             -EEEEEeccccccEEEEecc----ccC---Ccc-eecccCCceEEEEEccCC-cEEEEEecCcceeeeecccccccC---
Confidence             3568888899999999886    111   112 467999999999999988 899999999999999999887654   


Q ss_pred             cceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecC-CCcEEEEEEcCCCCEEEEEeCCCeEEE
Q psy17682        206 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH-PDIVYSASWNWDGSKLLTTCKDKKMRI  284 (490)
Q Consensus       206 ~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~i  284 (490)
                         ....+|..+|..+.|.|+   .+++++.|-+.++|+.. ++.+..+.+| ...+..++..++...++|++.|+.+++
T Consensus       212 ---~~~fgHsaRvw~~~~~~n---~i~t~gedctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~  284 (967)
T KOG0974|consen  212 ---CTGFGHSARVWACCFLPN---RIITVGEDCTCRVWGVN-GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKL  284 (967)
T ss_pred             ---cccccccceeEEEEeccc---eeEEeccceEEEEEecc-cceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhh
Confidence               124569999999999987   69999999999999764 5555577766 456899999999999999999999999


Q ss_pred             EeCC
Q psy17682        285 INPR  288 (490)
Q Consensus       285 wd~~  288 (490)
                      ||+.
T Consensus       285 ~~l~  288 (967)
T KOG0974|consen  285 WDLN  288 (967)
T ss_pred             hhhh
Confidence            9985

>KOG2314|consensus

Probab=99.34  E-value=9.4e-10  Score=102.04  Aligned_cols=331  Identities=15%  Similarity=0.151  Sum_probs=201.9

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      .+...-...+=.=+-+.|||.| .+|+|--.-| |.+|--.+-.                  .+....       ...+.
T Consensus       201 ~p~~ie~RenWTetyv~wSP~G-TYL~t~Hk~G-I~lWGG~~f~------------------r~~RF~-------Hp~Vq  253 (698)
T KOG2314|consen  201 EPSLIEERENWTETYVRWSPKG-TYLVTFHKQG-IALWGGESFD------------------RIQRFY-------HPGVQ  253 (698)
T ss_pred             chhhhhhhhcceeeeEEecCCc-eEEEEEeccc-eeeecCccHH------------------HHHhcc-------CCCce
Confidence            3333333344456789999999 9999988855 4788432211                  001111       11344


Q ss_pred             eeEeccccccceEEEEEe--------eCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeC
Q psy17682        115 EITISEDYVKEFKEEIRK--------LKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSE  186 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~--------~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~  186 (490)
                      -+.|||..  +|+-....        -.....+.||++     .+|.+.+...++.+....-.-..||.|+ .++|--..
T Consensus       254 ~idfSP~E--kYLVT~s~~p~~~~~~d~e~~~l~IWDI-----~tG~lkrsF~~~~~~~~~WP~frWS~Dd-Ky~Arm~~  325 (698)
T KOG2314|consen  254 FIDFSPNE--KYLVTYSPEPIIVEEDDNEGQQLIIWDI-----ATGLLKRSFPVIKSPYLKWPIFRWSHDD-KYFARMTG  325 (698)
T ss_pred             eeecCCcc--ceEEEecCCccccCcccCCCceEEEEEc-----cccchhcceeccCCCccccceEEeccCC-ceeEEecc
Confidence            55666652  22211111        123367999999     5666655555543333333345899987 78887766


Q ss_pred             CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC-----CcEEEEECCCCeeEEEEecCCCcE
Q psy17682        187 DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-----NNVAIWNVGTGEIMIQIECHPDIV  261 (490)
Q Consensus       187 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~v  261 (490)
                      + +|.||+..+-.++..-.       -.-..|....|+|.+ ++||--...     ..+.+-.+.+++.+++-.-+.-.=
T Consensus       326 ~-sisIyEtpsf~lld~Ks-------lki~gIr~FswsP~~-~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsD  396 (698)
T KOG2314|consen  326 N-SISIYETPSFMLLDKKS-------LKISGIRDFSWSPTS-NLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSD  396 (698)
T ss_pred             c-eEEEEecCceeeecccc-------cCCccccCcccCCCc-ceEEEEcccccCCcceEEEEecCccceeeeccceeeec
Confidence            4 79999976643322111       134678999999997 477654321     346677777777666655444333


Q ss_pred             EEEEEcCCCCEEEEEe----------CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEe
Q psy17682        262 YSASWNWDGSKLLTTC----------KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLR  331 (490)
Q Consensus       262 ~~~~~~~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iw  331 (490)
                      ..+.|-.+|.+|+.--          .-..+-|+.++..........-. ..+...+|-|.|..+++-+......++.+|
T Consensus       397 ckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velk-e~vi~FaWEP~gdkF~vi~g~~~k~tvsfY  475 (698)
T KOG2314|consen  397 CKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELK-ESVIAFAWEPHGDKFAVISGNTVKNTVSFY  475 (698)
T ss_pred             cEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecc-hheeeeeeccCCCeEEEEEccccccceeEE
Confidence            4577877888877532          11236667666554322221122 248889999999988876644456788999


Q ss_pred             cCC-CCCCCeEEEeccCCCceeeeeecCCCCeEEEEe--cCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCcee
Q psy17682        332 APD-HLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCG--KGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGC  408 (490)
Q Consensus       332 d~~-~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~  408 (490)
                      .+. +...+..+..++. ...+.+.|+|.|+++++.+  |..|.+.++|..-...  ..... ..+-..+.+.|.|.|++
T Consensus       476 ~~e~~~~~~~lVk~~dk-~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~--k~~~~-~eh~~at~veWDPtGRY  551 (698)
T KOG2314|consen  476 AVETNIKKPSLVKELDK-KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADL--KDTAS-PEHFAATEVEWDPTGRY  551 (698)
T ss_pred             EeecCCCchhhhhhhcc-cccceEEEcCCCcEEEEEEecccccceEEEecchhhh--hhccC-ccccccccceECCCCCE
Confidence            888 4444444444444 5578899999999986654  5588999999984221  01111 12235688999999999


Q ss_pred             EEeecc
Q psy17682        409 DVNSCE  414 (490)
Q Consensus       409 l~~~~~  414 (490)
                      +++++.
T Consensus       552 vvT~ss  557 (698)
T KOG2314|consen  552 VVTSSS  557 (698)
T ss_pred             EEEeee
Confidence            888754

>KOG0280|consensus

Probab=99.33  E-value=1.8e-10  Score=98.59  Aligned_cols=251  Identities=10%  Similarity=0.047  Sum_probs=154.8

Q ss_pred             CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeeccc---CCeeEEEECCCCCCEEEEEeCCCc
Q psy17682        113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHK---GPVLDIAWSPHDDNVIASGSEDCV  189 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~---~~V~~~~~~p~~~~~l~s~~~dg~  189 (490)
                      +..+.|.-...+.- ..+..+-..|.|.++....    .... -.++.+..-+   ....++.|++.+ ..++++..+|.
T Consensus        72 ~~dm~w~~~~~~g~-~~l~~a~a~G~i~~~r~~~----~~ss-~~L~~ls~~ki~~~~~lslD~~~~~-~~i~vs~s~G~  144 (339)
T KOG0280|consen   72 EFDMLWRIRETDGD-FNLLDAHARGQIQLYRNDE----DESS-VHLRGLSSKKISVVEALSLDISTSG-TKIFVSDSRGS  144 (339)
T ss_pred             cceeeeeeccCCcc-ceeeeccccceEEEEeecc----ceee-eeecccchhhhhheeeeEEEeeccC-ceEEEEcCCCc
Confidence            44455543332222 2455567778888887651    1110 0011111111   134577899877 77888888999


Q ss_pred             EEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC-CCeeEEE-EecCCCcEEEEEEc
Q psy17682        190 VKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG-TGEIMIQ-IECHPDIVYSASWN  267 (490)
Q Consensus       190 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~-~~~~~~~-~~~~~~~v~~~~~~  267 (490)
                      +.+-+........     .+.++.|.-.++...|+...++++++|+.|+.+..||++ .++.+.. .+.|...|.++.-+
T Consensus       145 ~~~v~~t~~~le~-----vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss  219 (339)
T KOG0280|consen  145 ISGVYETEMVLEK-----VQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSS  219 (339)
T ss_pred             EEEEecceeeeee-----cccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecC
Confidence            9855544333322     223667999999999998888899999999999999999 3444444 45688899999888


Q ss_pred             C-CCCEEEEEeCCCeEEEEeCC-CCceeeeeeecCCCceeEEEEeCC--CcEEEEEeCCCceeEEEEecCCCCCCC---e
Q psy17682        268 W-DGSKLLTTCKDKKMRIINPR-TGAIEEEAVCHEGSKATRAIYLKS--GLIFTTGFSKMSERQYSLRAPDHLDEP---I  340 (490)
Q Consensus       268 ~-~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~s~~--~~~l~~~~~~~~~~~i~iwd~~~~~~~---~  340 (490)
                      | .+.+|++|+.|..|++||.| .++++..-... + -+..+.++|.  +++|+++-    -.-.+|-+.......   .
T Consensus       220 ~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v~-G-GVWRi~~~p~~~~~lL~~CM----h~G~ki~~~~~~~~e~~~~  293 (339)
T KOG0280|consen  220 PPKPTYIATGSYDECIRVLDTRNMGKPLFKAKVG-G-GVWRIKHHPEIFHRLLAACM----HNGAKILDSSDKVLEFQIV  293 (339)
T ss_pred             CCCCceEEEeccccceeeeehhcccCccccCccc-c-ceEEEEecchhhhHHHHHHH----hcCceEEEecccccchhee
Confidence            7 67899999999999999999 45666544332 3 3899999886  44555553    333455554443222   1


Q ss_pred             EEEeccCCCceeeeeecCCCCeEEEE-ecCCCeEE-EEEecCCC
Q psy17682        341 VMVELDTSNGVMFPLYDPDTNLVYLC-GKGDSVIR-YFEITAEP  382 (490)
Q Consensus       341 ~~~~~~~~~~i~~~~~s~~~~~l~~~-g~~dg~i~-iwd~~~~~  382 (490)
                      ......|.+-...-.|.....++ ++ ...|+.++ +|-..++.
T Consensus       294 ~~s~~~hdSl~YG~DWd~~~~~l-ATCsFYDk~~~~~Wl~~t~~  336 (339)
T KOG0280|consen  294 LPSDKIHDSLCYGGDWDSKDSFL-ATCSFYDKKIRQLWLHITGE  336 (339)
T ss_pred             eeccccccceeecccccccccee-eeeeccccceeeeeeeccCC
Confidence            11111232333344443333445 44 34666655 66655543

>KOG4547|consensus

Probab=99.31  E-value=3.9e-10  Score=105.53  Aligned_cols=192  Identities=14%  Similarity=0.138  Sum_probs=152.3

Q ss_pred             CCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEe------e-------------CCCCEEEEEeCC
Q psy17682        177 DDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWH------P-------------TAQNVLLTAGSD  237 (490)
Q Consensus       177 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------p-------------~~~~~l~s~~~d  237 (490)
                      +..++|....||.+|+|+..+++....+.. ...   -.+..++..|.      |             .+...++-|...
T Consensus         4 ~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p-~~~---~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~   79 (541)
T KOG4547|consen    4 ALDYFALSTGDGRLRIWDTAKNQLQQEFAP-IAS---LSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQ   79 (541)
T ss_pred             hhheEeecCCCCeEEEEEccCceeeeeecc-chh---ccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCC
Confidence            347999999999999999999887665542 222   23445555552      1             122367778888


Q ss_pred             CcEEEEECCCCeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcE
Q psy17682        238 NNVAIWNVGTGEIMIQIE--CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLI  315 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  315 (490)
                      |.|.+|+...++....+.  .|.+.|.++.++.+-..|.+++.|+.+..|+......++........ +.+++.+|||..
T Consensus        80 g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~-~~sl~is~D~~~  158 (541)
T KOG4547|consen   80 GSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPL-VSSLCISPDGKI  158 (541)
T ss_pred             ccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCc-cceEEEcCCCCE
Confidence            999999999999887776  78999999999998899999999999999999999988888766554 899999999999


Q ss_pred             EEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCC-----CCeEEEEecCCCeEEEEEecC
Q psy17682        316 FTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPD-----TNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       316 l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~-----~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      +++++     +.|++||+.+.+.  .....+|.+.|..+.|.-+     |.+++.+...+..+.+|-+..
T Consensus       159 l~~as-----~~ik~~~~~~kev--v~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~  221 (541)
T KOG4547|consen  159 LLTAS-----RQIKVLDIETKEV--VITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK  221 (541)
T ss_pred             EEecc-----ceEEEEEccCceE--EEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence            99885     7899999998663  2233367778999998777     788866666777888888775

>KOG1064|consensus

Probab=99.29  E-value=3.1e-11  Score=125.48  Aligned_cols=197  Identities=16%  Similarity=0.234  Sum_probs=151.3

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      .....+..|-..|.++.=+|.. .+.+||+.||.|++|.+..+.                                    
T Consensus      2199 ~~~~~~k~~v~~v~r~~sHp~~-~~Yltgs~dgsv~~~~w~~~~------------------------------------ 2241 (2439)
T KOG1064|consen 2199 GASVMIKHPVENVRRMTSHPSD-PYYLTGSQDGSVRMFEWGHGQ------------------------------------ 2241 (2439)
T ss_pred             cceeEeecccCceeeecCCCCC-ceEEecCCCceEEEEeccCCC------------------------------------
Confidence            3344566677888888888888 778889999999999776644                                    


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                                             .+..|+..                 |. ..|+.+.|+.+| +.+..+..||.+.+|.
T Consensus      2242 -----------------------~v~~~rt~-----------------g~-s~vtr~~f~~qG-nk~~i~d~dg~l~l~q 2279 (2439)
T KOG1064|consen 2242 -----------------------QVVCFRTA-----------------GN-SRVTRSRFNHQG-NKFGIVDGDGDLSLWQ 2279 (2439)
T ss_pred             -----------------------eEEEeecc-----------------Cc-chhhhhhhcccC-CceeeeccCCceeecc
Confidence                                   12223221                 33 678889999988 7888889999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe---CCCcEEEEECCCC---eeEEEEecCCCcEEEEEEcC
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG---SDNNVAIWNVGTG---EIMIQIECHPDIVYSASWNW  268 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~---~dg~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~~  268 (490)
                      +.        +.|......|......+.|-..   .+++++   .++.+.+||..-.   ..+.  .+|.+.++++++-|
T Consensus      2280 ~~--------pk~~~s~qchnk~~~Df~Fi~s---~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P 2346 (2439)
T KOG1064|consen 2280 AS--------PKPYTSWQCHNKALSDFRFIGS---LLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAP 2346 (2439)
T ss_pred             cC--------CcceeccccCCccccceeeeeh---hhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcC
Confidence            76        2344456669999999999862   567665   3688999996532   2333  68999999999999


Q ss_pred             CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC
Q psy17682        269 DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD  337 (490)
Q Consensus       269 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~  337 (490)
                      ..+.|++|+.+|.|++||++..+...++..          +. ...++++|+   ..|.++||++....
T Consensus      2347 ~~qllisggr~G~v~l~D~rqrql~h~~~~----------~~-~~~~f~~~s---s~g~ikIw~~s~~~ 2401 (2439)
T KOG1064|consen 2347 KHQLLISGGRKGEVCLFDIRQRQLRHTFQA----------LD-TREYFVTGS---SEGNIKIWRLSEFG 2401 (2439)
T ss_pred             cceEEEecCCcCcEEEeehHHHHHHHHhhh----------hh-hhheeeccC---cccceEEEEccccc
Confidence            999999999999999999998887766653          23 456888888   68999999998754

>KOG0280|consensus

Probab=99.29  E-value=3.2e-10  Score=97.07  Aligned_cols=198  Identities=14%  Similarity=0.161  Sum_probs=130.5

Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                      .++.|++..     ..+.++..+|.+.+....      ....+..+.+++|+-+.+...|+-...+++.+|++|+.+..|
T Consensus       125 lslD~~~~~-----~~i~vs~s~G~~~~v~~t------~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~  193 (339)
T KOG0280|consen  125 LSLDISTSG-----TKIFVSDSRGSISGVYET------EMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCW  193 (339)
T ss_pred             eEEEeeccC-----ceEEEEcCCCcEEEEecc------eeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEE
Confidence            345566554     236667778887744432      112234557889999999999998888999999999999999


Q ss_pred             ECCCC-CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC-CeeEEEEecCCCcEEEEEEcCCC-
Q psy17682        194 QIPDG-GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT-GEIMIQIECHPDIVYSASWNWDG-  270 (490)
Q Consensus       194 d~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~-  270 (490)
                      |++.. +.+..      ...-|...|.++.-+|..+.++++|+.|..|++||.++ ++++..-. ..+.|..+.++|.- 
T Consensus       194 D~R~p~~~i~~------n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~-v~GGVWRi~~~p~~~  266 (339)
T KOG0280|consen  194 DIRIPKTFIWH------NSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK-VGGGVWRIKHHPEIF  266 (339)
T ss_pred             EecCCcceeee------cceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCc-cccceEEEEecchhh
Confidence            99832 22221      12348899999999988778999999999999999984 56665544 45889999999943 


Q ss_pred             CEEEEEeCCCeEEEEeCCCCcee-----eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEE-Eec
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIE-----EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYS-LRA  332 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~-iwd  332 (490)
                      ..++.++.-+-.+|.+...+...     ...+.|.+- .+...|.....++++++  ..|+.++ +|-
T Consensus       267 ~~lL~~CMh~G~ki~~~~~~~~e~~~~~~s~~~hdSl-~YG~DWd~~~~~lATCs--FYDk~~~~~Wl  331 (339)
T KOG0280|consen  267 HRLLAACMHNGAKILDSSDKVLEFQIVLPSDKIHDSL-CYGGDWDSKDSFLATCS--FYDKKIRQLWL  331 (339)
T ss_pred             hHHHHHHHhcCceEEEecccccchheeeeccccccce-eeccccccccceeeeee--ccccceeeeee
Confidence            23344444455777777654322     222233332 34444533345677754  1344433 553

>KOG2041|consensus

Probab=99.29  E-value=1e-09  Score=104.72  Aligned_cols=292  Identities=11%  Similarity=0.207  Sum_probs=190.0

Q ss_pred             ccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccc
Q psy17682         43 HQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDY  122 (490)
Q Consensus        43 H~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  122 (490)
                      .+....|++|+... .+++.||.||.+++-.+.+.....                 .. .+                   
T Consensus        13 nnvkL~c~~WNke~-gyIAcgG~dGlLKVlKl~t~t~d~-----------------~~-~g-------------------   54 (1189)
T KOG2041|consen   13 NNVKLHCAEWNKES-GYIACGGADGLLKVLKLGTDTTDL-----------------NK-SG-------------------   54 (1189)
T ss_pred             CCceEEEEEEcccC-CeEEeccccceeEEEEccccCCcc-----------------cc-cc-------------------
Confidence            34568999999988 899999999999999887633100                 00 00                   


Q ss_pred             ccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccc
Q psy17682        123 VKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISR  202 (490)
Q Consensus       123 ~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~  202 (490)
                             +++.        -++           .--+++.||++.|.-+.|+.+. ..|-|...+|-|.+|-+-.+.-..
T Consensus        55 -------laa~--------snL-----------smNQtLeGH~~sV~vvTWNe~~-QKLTtSDt~GlIiVWmlykgsW~E  107 (1189)
T KOG2041|consen   55 -------LAAA--------SNL-----------SMNQTLEGHNASVMVVTWNENN-QKLTTSDTSGLIIVWMLYKGSWCE  107 (1189)
T ss_pred             -------cccc--------ccc-----------chhhhhccCcceEEEEEecccc-ccccccCCCceEEEEeeecccHHH
Confidence                   0000        000           1123678999999999999876 789999999999999998776544


Q ss_pred             ccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeE
Q psy17682        203 TLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM  282 (490)
Q Consensus       203 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  282 (490)
                      .+..     ....+-|.+++|+.+|. .++..-.||.|.+=.++ |..+.--.-.......+.|++|.+.++.+-.+|.+
T Consensus       108 EMiN-----nRnKSvV~SmsWn~dG~-kIcIvYeDGavIVGsvd-GNRIwgKeLkg~~l~hv~ws~D~~~~Lf~~ange~  180 (1189)
T KOG2041|consen  108 EMIN-----NRNKSVVVSMSWNLDGT-KICIVYEDGAVIVGSVD-GNRIWGKELKGQLLAHVLWSEDLEQALFKKANGET  180 (1189)
T ss_pred             HHhh-----CcCccEEEEEEEcCCCc-EEEEEEccCCEEEEeec-cceecchhcchheccceeecccHHHHHhhhcCCcE
Confidence            3321     12556789999999996 88888999998876664 33332111112234578899999999988899999


Q ss_pred             EEEeCCCC-------ceeeeeee---cCCCceeEEEEe--------CCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe
Q psy17682        283 RIINPRTG-------AIEEEAVC---HEGSKATRAIYL--------KSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE  344 (490)
Q Consensus       283 ~iwd~~~~-------~~~~~~~~---~~~~~~~~~~~s--------~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~  344 (490)
                      .+||....       .+.....+   ..+..+..+.|.        |+...|+++.   ..|.+.|..-.+...|..+. 
T Consensus       181 hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy---~nGr~QiMR~eND~~Pvv~d-  256 (1189)
T KOG2041|consen  181 HLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCY---ANGRMQIMRSENDPEPVVVD-  256 (1189)
T ss_pred             EEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEE---cCceehhhhhcCCCCCeEEe-
Confidence            99997642       11111111   111124444443        4667888888   57778887766666665543 


Q ss_pred             ccCCCceeeeeecCCCCeEEEEecCC--------CeEEEEEecCCCCeeEEeeeeeC-CCceeeEEEeeCceeEEee-cc
Q psy17682        345 LDTSNGVMFPLYDPDTNLVYLCGKGD--------SVIRYFEITAEPPFVHYINTFQT-PDPQRGIGMMPKRGCDVNS-CE  414 (490)
Q Consensus       345 ~~~~~~i~~~~~s~~~~~l~~~g~~d--------g~i~iwd~~~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~-~~  414 (490)
                        ....+..+.|+++|..|+++|...        +.|.+|..     +.+.+..++. +..|++++|-..|..++.+ ++
T Consensus       257 --tgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp-----~G~i~gtlkvpg~~It~lsWEg~gLriA~Avds  329 (1189)
T KOG2041|consen  257 --TGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSP-----YGHIVGTLKVPGSCITGLSWEGTGLRIAIAVDS  329 (1189)
T ss_pred             --cccEeecceecCCCcEEEEccCcccccCccccceEEEecc-----chhheEEEecCCceeeeeEEcCCceEEEEEecc
Confidence              235688999999999996666321        13444332     2223444442 3568999998877544433 44


Q ss_pred             eeE
Q psy17682        415 IGR  417 (490)
Q Consensus       415 ~~~  417 (490)
                      .+.
T Consensus       330 fiy  332 (1189)
T KOG2041|consen  330 FIY  332 (1189)
T ss_pred             eEE
Confidence            433

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.28  E-value=1.9e-08  Score=92.86  Aligned_cols=280  Identities=11%  Similarity=0.055  Sum_probs=159.6

Q ss_pred             HhhheeeeeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeee---------CCCeEEEEeCCCCCCCCCCCcccc
Q psy17682         18 WFAVLFRLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG---------KEAEPILISLKDGYIPPSEKSKSA   88 (490)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~---------~D~~v~iWd~~~~~~~~~~~~~~~   88 (490)
                      +++|.-++..++..+....-..-.|.....  + ++|++..+.++.+         .+..|.+||..+.+...       
T Consensus        22 ~~~~~~~v~ViD~~~~~v~g~i~~G~~P~~--~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~-------   91 (352)
T TIGR02658        22 HFAATTQVYTIDGEAGRVLGMTDGGFLPNP--V-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIA-------   91 (352)
T ss_pred             ccccCceEEEEECCCCEEEEEEEccCCCce--e-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEe-------
Confidence            466767788888877555544445544333  4 8999966666666         68899999998865211       


Q ss_pred             ceeccccceeecccCCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCe
Q psy17682         89 LKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPV  168 (490)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V  168 (490)
                                                .+.+.++                              .+      .  ..-..-
T Consensus        92 --------------------------~i~~p~~------------------------------p~------~--~~~~~~  107 (352)
T TIGR02658        92 --------------------------DIELPEG------------------------------PR------F--LVGTYP  107 (352)
T ss_pred             --------------------------EEccCCC------------------------------ch------h--hccCcc
Confidence                                      0000000                              00      0  011233


Q ss_pred             eEEEECCCCCCEEEEEe-C-CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC
Q psy17682        169 LDIAWSPHDDNVIASGS-E-DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG  246 (490)
Q Consensus       169 ~~~~~~p~~~~~l~s~~-~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~  246 (490)
                      ..++++|+| ++|+... . +..|.+.|+.+++.+..+..|......-.+.-..+..+.|+..+.++-..+|+...   .
T Consensus       108 ~~~~ls~dg-k~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~---~  183 (352)
T TIGR02658       108 WMTSLTPDN-KTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKI---K  183 (352)
T ss_pred             ceEEECCCC-CEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceEE---e
Confidence            457899998 6666554 3 78999999999988877654321111111111222233344322223333333220   0


Q ss_pred             CCeeEEEEecCCCcEE-EEEEcC-CCCEEEEEeCCCeEEEEeCCCCc-----eeeeeeec---CC---CceeEEEEeCCC
Q psy17682        247 TGEIMIQIECHPDIVY-SASWNW-DGSKLLTTCKDKKMRIINPRTGA-----IEEEAVCH---EG---SKATRAIYLKSG  313 (490)
Q Consensus       247 ~~~~~~~~~~~~~~v~-~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~-----~~~~~~~~---~~---~~~~~~~~s~~~  313 (490)
                      +   ...+......+. .-.|.+ +|+.+.+... |+|.+.|+....     ....+...   .+   ..+.-+++++++
T Consensus       184 ~---~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg  259 (352)
T TIGR02658       184 P---TEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRAR  259 (352)
T ss_pred             e---eeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCC
Confidence            0   011111000000 003455 7887777766 999999965432     22222111   01   113349999998


Q ss_pred             cEEEEEeC-------CCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCC-eEEEEecCCCeEEEEEecCCC
Q psy17682        314 LIFTTGFS-------KMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTN-LVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       314 ~~l~~~~~-------~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      +.+.+...       ....+.|.++|..+.+.   ...+.....+..++++||++ .|+++...++.|.++|..+++
T Consensus       260 ~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kv---i~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k  333 (352)
T TIGR02658       260 DRIYLLADQRAKWTHKTASRFLFVVDAKTGKR---LRKIELGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGK  333 (352)
T ss_pred             CEEEEEecCCccccccCCCCEEEEEECCCCeE---EEEEeCCCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCe
Confidence            87776421       11236899999988663   33334456789999999999 887676678999999999987

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG0309|consensus

Probab=99.23  E-value=2.1e-10  Score=109.66  Aligned_cols=297  Identities=19%  Similarity=0.278  Sum_probs=188.0

Q ss_pred             cceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccc
Q psy17682         44 QRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYV  123 (490)
Q Consensus        44 ~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  123 (490)
                      .+++..+..+|.| +-++.++.-|. .+-|+....-++              ..+..+       ....+-.+.|++...
T Consensus        24 ~~~~~a~si~p~g-rdi~lAsr~gl-~i~dld~p~~pp--------------r~l~h~-------tpw~vad~qws~h~a   80 (1081)
T KOG0309|consen   24 DGGFNAVSINPSG-RDIVLASRQGL-YIIDLDDPFTPP--------------RWLHHI-------TPWQVADVQWSPHPA   80 (1081)
T ss_pred             cCcccceeecccc-chhhhhhhcCe-EEEeccCCCCCc--------------eeeecc-------CcchhcceecccCCC
Confidence            4567888899999 55666777665 455666543222              122211       122455666776642


Q ss_pred             cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc
Q psy17682        124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT  203 (490)
Q Consensus       124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~  203 (490)
                      ..   +-++......-.+|++.....     ......+.||...|+.+-|+|+....+++++.|..+..||+++..    
T Consensus        81 ~~---~wiVsts~qkaiiwnlA~ss~-----~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~----  148 (1081)
T KOG0309|consen   81 KP---YWIVSTSNQKAIIWNLAKSSS-----NAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPH----  148 (1081)
T ss_pred             Cc---eeEEecCcchhhhhhhhcCCc-----cceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCC----
Confidence            22   233344455566788762221     222335679999999999999999999999999999999997654    


Q ss_pred             cccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC-eeEEEEecCCCcEEEEEEcC-CCCEEEEEeCCCe
Q psy17682        204 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG-EIMIQIECHPDIVYSASWNW-DGSKLLTTCKDKK  281 (490)
Q Consensus       204 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~  281 (490)
                        .|......-...-..++|+-..++.+++ +..+.|++||++.| .++..+++|...|+.++|+. ....+.+++.||+
T Consensus       149 --~p~ys~~~w~s~asqVkwnyk~p~vlas-shg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~t  225 (1081)
T KOG0309|consen  149 --RPFYSTSSWRSAASQVKWNYKDPNVLAS-SHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGT  225 (1081)
T ss_pred             --cceeeeecccccCceeeecccCcchhhh-ccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCc
Confidence              2333333345566889999887755554 46678999999976 47888999999999999976 3457889999999


Q ss_pred             EEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCC---------CCCCCeEEEeccCCCcee
Q psy17682        282 MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPD---------HLDEPIVMVELDTSNGVM  352 (490)
Q Consensus       282 i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~---------~~~~~~~~~~~~~~~~i~  352 (490)
                      |+.||-...............++....+.|-|.-...--.. .+..+.+++.+         +...++. ...+|...|.
T Consensus       226 vkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~-G~n~v~~~~c~n~d~e~n~~~~~~pVh-~F~GH~D~V~  303 (1081)
T KOG0309|consen  226 VKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMV-GGNMVPQLRCENSDLEWNVFDLNTPVH-TFVGHDDVVL  303 (1081)
T ss_pred             eeeecccccccccceeccccCcceeccccccCceeEecccc-CCeeeeeccccchhhhhccccCCccee-eecCcchHHH
Confidence            99999876544433333444556666777654322211100 12344444433         3333322 2235555554


Q ss_pred             eeeecC--------C-CCeEEEEecCCCeEEEEEecC
Q psy17682        353 FPLYDP--------D-TNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       353 ~~~~s~--------~-~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      ...|-.        | ..+-+++-+.|..+++|-+.+
T Consensus       304 eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~  340 (1081)
T KOG0309|consen  304 EFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS  340 (1081)
T ss_pred             HHhhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence            444422        1 123347899999999998865

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.21  E-value=4.3e-08  Score=94.40  Aligned_cols=198  Identities=10%  Similarity=0.107  Sum_probs=125.6

Q ss_pred             CeeEEEECCCCCCEEEEEeC---CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC--CcEE
Q psy17682        167 PVLDIAWSPHDDNVIASGSE---DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD--NNVA  241 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d--g~v~  241 (490)
                      .+....|+|+|...++..+.   +..|.++|+.+++....        ....+......|+|+|+.++++.+.+  ..|.
T Consensus       189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~l--------t~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy  260 (419)
T PRK04043        189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKI--------ASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIY  260 (419)
T ss_pred             CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEE--------ecCCCcEEeeEECCCCCEEEEEEccCCCcEEE
Confidence            77889999999543554333   35688889887765332        12445566788999997666666544  4677


Q ss_pred             EEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC-C--eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEE
Q psy17682        242 IWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD-K--KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTT  318 (490)
Q Consensus       242 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~  318 (490)
                      ++|+.+++. ..+..+........|+|||+.|+..+.. +  .|+++|+.+++..+....  +.  ....|+|+|+.++.
T Consensus       261 ~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~--g~--~~~~~SPDG~~Ia~  335 (419)
T PRK04043        261 LYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH--GK--NNSSVSTYKNYIVY  335 (419)
T ss_pred             EEECCCCcE-EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC--CC--cCceECCCCCEEEE
Confidence            778877764 3444344334456899999987776632 2  688899988776443321  11  12489999998877


Q ss_pred             EeCCCc------eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCe--EEEEEecCC
Q psy17682        319 GFSKMS------ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSV--IRYFEITAE  381 (490)
Q Consensus       319 ~~~~~~------~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~--i~iwd~~~~  381 (490)
                      ......      ...|.+.|+.++.. ..+   ..........|+|||+.++++....+.  +.+.++...
T Consensus       336 ~~~~~~~~~~~~~~~I~v~d~~~g~~-~~L---T~~~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~  402 (419)
T PRK04043        336 SSRETNNEFGKNTFNLYLISTNSDYI-RRL---TANGVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYN  402 (419)
T ss_pred             EEcCCCcccCCCCcEEEEEECCCCCe-EEC---CCCCCcCCeEECCCCCEEEEEEccCCcEEEEEEecCCC
Confidence            663221      14688888877542 111   112233468999999988776644443  555555543

>KOG2314|consensus

Probab=99.19  E-value=9e-09  Score=95.70  Aligned_cols=285  Identities=16%  Similarity=0.197  Sum_probs=175.6

Q ss_pred             ceeeeEEeccCCCceEEeeeCC-----------CeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         45 RRVGLVLWHPTAQNVLLTAGKE-----------AEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        45 ~~V~~v~~~p~~~~~l~s~~~D-----------~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      ..|.-+.|||.. ++|+|-|..           ..++|||+.+|........               +     .......
T Consensus       250 p~Vq~idfSP~E-kYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~---------------~-----~~~~~~W  308 (698)
T KOG2314|consen  250 PGVQFIDFSPNE-KYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPV---------------I-----KSPYLKW  308 (698)
T ss_pred             CCceeeecCCcc-ceEEEecCCccccCcccCCCceEEEEEccccchhcceec---------------c-----CCCcccc
Confidence            368889999999 899998642           5899999999874331111               0     0011134


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCC-----C
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSED-----C  188 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~d-----g  188 (490)
                      .-+.||.+  ++|.+.+..    +.|.||...+-..-..+      .  -.-..|....|+|.+ ++||--...     .
T Consensus       309 P~frWS~D--dKy~Arm~~----~sisIyEtpsf~lld~K------s--lki~gIr~FswsP~~-~llAYwtpe~~~~pa  373 (698)
T KOG2314|consen  309 PIFRWSHD--DKYFARMTG----NSISIYETPSFMLLDKK------S--LKISGIRDFSWSPTS-NLLAYWTPETNNIPA  373 (698)
T ss_pred             ceEEeccC--CceeEEecc----ceEEEEecCceeeeccc------c--cCCccccCcccCCCc-ceEEEEcccccCCcc
Confidence            45678877  566664433    78899977521111111      1  123567778899976 777765432     2


Q ss_pred             cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEE----------EeCCCcEEEEECCCCe-eEEEEecC
Q psy17682        189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLT----------AGSDNNVAIWNVGTGE-IMIQIECH  257 (490)
Q Consensus       189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s----------~~~dg~v~iwd~~~~~-~~~~~~~~  257 (490)
                      .+.+-.+.+++.++.-..       |.-.=..+-|..+|+ +|+.          .+.-..+.|+.++... ++..+. .
T Consensus       374 rvtL~evPs~~~iRt~nl-------fnVsDckLhWQk~gd-yLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~ve-l  444 (698)
T KOG2314|consen  374 RVTLMEVPSKREIRTKNL-------FNVSDCKLHWQKSGD-YLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVE-L  444 (698)
T ss_pred             eEEEEecCccceeeeccc-------eeeeccEEEeccCCc-EEEEEEEeeccccccceEeeEEEEEeeccCCCceeee-c
Confidence            466667777666554321       222223455666665 4442          1222346677776554 333333 5


Q ss_pred             CCcEEEEEEcCCCCEEEEEeC---CCeEEEEeCCC-C---ceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEE
Q psy17682        258 PDIVYSASWNWDGSKLLTTCK---DKKMRIINPRT-G---AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSL  330 (490)
Q Consensus       258 ~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~-~---~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~i  330 (490)
                      ...|...+|-|.|..+++-+.   ..++.+|-+.+ .   +.+..+..   ...+.+.|+|.|++++.+.-.+..+.+.+
T Consensus       445 ke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk---~~~N~vfwsPkG~fvvva~l~s~~g~l~F  521 (698)
T KOG2314|consen  445 KESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK---KFANTVFWSPKGRFVVVAALVSRRGDLEF  521 (698)
T ss_pred             chheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc---cccceEEEcCCCcEEEEEEecccccceEE
Confidence            678999999999988777653   35688888873 2   23333332   23788999999999988875556788999


Q ss_pred             ecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecC------CCeEEEEEecC
Q psy17682        331 RAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKG------DSVIRYFEITA  380 (490)
Q Consensus       331 wd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~------dg~i~iwd~~~  380 (490)
                      +|+.......  .....+...+.+.|.|.|+|+ ++++.      |.--++|+...
T Consensus       522 ~D~~~a~~k~--~~~~eh~~at~veWDPtGRYv-vT~ss~wrhk~d~GYri~tfqG  574 (698)
T KOG2314|consen  522 YDTDYADLKD--TASPEHFAATEVEWDPTGRYV-VTSSSSWRHKVDNGYRIFTFQG  574 (698)
T ss_pred             Eecchhhhhh--ccCccccccccceECCCCCEE-EEeeehhhhccccceEEEEeec
Confidence            9988533211  111223457889999999999 56643      33445665543

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.19  E-value=1.9e-07  Score=98.09  Aligned_cols=294  Identities=13%  Similarity=0.194  Sum_probs=177.0

Q ss_pred             cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEE
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVK  191 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~  191 (490)
                      .+.++.+-++.     ..+..+..+|.|.++..+.     ......+.....-...|.+++||||+ .+|+....++++.
T Consensus        77 ~ivs~~yl~d~-----~~l~~~~~~Gdi~~~~~~~-----~~~~~~~E~VG~vd~GI~a~~WSPD~-Ella~vT~~~~l~  145 (928)
T PF04762_consen   77 KIVSFQYLADS-----ESLCIALASGDIILVREDP-----DPDEDEIEIVGSVDSGILAASWSPDE-ELLALVTGEGNLL  145 (928)
T ss_pred             cEEEEEeccCC-----CcEEEEECCceEEEEEccC-----CCCCceeEEEEEEcCcEEEEEECCCc-CEEEEEeCCCEEE
Confidence            45555555552     3455567778888884331     11112233444457799999999998 7888888888887


Q ss_pred             EEECCCCCcc------------------------ccc------------ccce------eeecccccCEEEEEEeeCCCC
Q psy17682        192 VWQIPDGGIS------------------------RTL------------TEPV------VDLLYHQRRVGLVLWHPTAQN  229 (490)
Q Consensus       192 iwd~~~~~~~------------------------~~~------------~~~~------~~~~~~~~~v~~~~~~p~~~~  229 (490)
                      +-.-. ...+                        ..+            ..|.      ..+. +...-..++|..||. 
T Consensus       146 ~mt~~-fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~-  222 (928)
T PF04762_consen  146 LMTRD-FDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGE-  222 (928)
T ss_pred             EEecc-ceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCc-
Confidence            76421 1100                        000            0110      1122 344567899999996 


Q ss_pred             EEEEEeC---C---CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC---CCeEEEEeCCCCceeeeeee--
Q psy17682        230 VLLTAGS---D---NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK---DKKMRIINPRTGAIEEEAVC--  298 (490)
Q Consensus       230 ~l~s~~~---d---g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~--  298 (490)
                      ++|+.+.   .   ..+|||+-+ |+...+.+.-.+--.+++|.|.|++|++...   ...|.+|. ++|-.-..+..  
T Consensus       223 yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~~  300 (928)
T PF04762_consen  223 YFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLRF  300 (928)
T ss_pred             EEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecCC
Confidence            7777664   2   579999954 7655544433444457899999999998864   34566776 44443333332  


Q ss_pred             -cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeE-EEeccCCCceeeeeecCCCCeEEEEecCCCeEEEE
Q psy17682        299 -HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIV-MVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYF  376 (490)
Q Consensus       299 -~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iw  376 (490)
                       +....+..+.|++++.+||...    ...|.+|-..+..--.. ...+.....+..+.|+|...+-+...+.+|.+..+
T Consensus       301 ~~~~~~v~~l~Wn~ds~iLAv~~----~~~vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~  376 (928)
T PF04762_consen  301 DPEEEKVIELAWNSDSEILAVWL----EDRVQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIY  376 (928)
T ss_pred             CCCCceeeEEEECCCCCEEEEEe----cCCceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEE
Confidence             3345689999999999999986    33499999887542211 11223334455689999765543555555666544


Q ss_pred             Ee----cCCC----------------------------CeeEEeeeeeCCCceeeEEEeeCce--eEEeecceeEEEEec
Q psy17682        377 EI----TAEP----------------------------PFVHYINTFQTPDPQRGIGMMPKRG--CDVNSCEIGRFFRLN  422 (490)
Q Consensus       377 d~----~~~~----------------------------~~~~~~~~~~~~~~i~~~~~sp~~~--~l~~~~~~~~~~~~~  422 (490)
                      +.    ..+.                            |+.-....+..+.+|..++|++++.  .++..++.+.+|.+.
T Consensus       377 ~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~  456 (928)
T PF04762_consen  377 DFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWD  456 (928)
T ss_pred             EEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEEec
Confidence            43    2111                            0000111223456799999999984  455557778888865


Q ss_pred             CCC
Q psy17682        423 NSG  425 (490)
Q Consensus       423 ~~~  425 (490)
                      ...
T Consensus       457 ~~~  459 (928)
T PF04762_consen  457 LKN  459 (928)
T ss_pred             CCC
Confidence            543

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.18  E-value=1e-07  Score=87.22  Aligned_cols=147  Identities=11%  Similarity=0.139  Sum_probs=115.0

Q ss_pred             ecccCCeeEEEECCCCCCEEEEEeCCC-cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcE
Q psy17682        162 GGHKGPVLDIAWSPHDDNVIASGSEDC-VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNV  240 (490)
Q Consensus       162 ~~h~~~V~~~~~~p~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v  240 (490)
                      -+|.+.|.-..+.-++ +-++.|..|| .+-|+|.++++..+ +       ...-+.|.++..+|+|+ .++.+.....+
T Consensus       356 v~~~~~VrY~r~~~~~-e~~vigt~dgD~l~iyd~~~~e~kr-~-------e~~lg~I~av~vs~dGK-~~vvaNdr~el  425 (668)
T COG4946         356 VGKKGGVRYRRIQVDP-EGDVIGTNDGDKLGIYDKDGGEVKR-I-------EKDLGNIEAVKVSPDGK-KVVVANDRFEL  425 (668)
T ss_pred             cCCCCceEEEEEccCC-cceEEeccCCceEEEEecCCceEEE-e-------eCCccceEEEEEcCCCc-EEEEEcCceEE
Confidence            4788889999998877 5888999999 89999988776433 2       22567899999999996 78888777899


Q ss_pred             EEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCC----eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEE
Q psy17682        241 AIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK----KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIF  316 (490)
Q Consensus       241 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  316 (490)
                      .+.|+.+++....-+...+-|+.++|+|+++++|-+--+|    .|+++|+..++...... ... .-.+-+|.|++++|
T Consensus       426 ~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT-~ta-~DfsPaFD~d~ryL  503 (668)
T COG4946         426 WVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTT-PTA-YDFSPAFDPDGRYL  503 (668)
T ss_pred             EEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecC-Ccc-cccCcccCCCCcEE
Confidence            9999999986655555677899999999999999886655    59999999887654433 222 14567899999877


Q ss_pred             EEEe
Q psy17682        317 TTGF  320 (490)
Q Consensus       317 ~~~~  320 (490)
                      ..-+
T Consensus       504 YfLs  507 (668)
T COG4946         504 YFLS  507 (668)
T ss_pred             EEEe
Confidence            6554

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.18  E-value=4.4e-08  Score=90.40  Aligned_cols=288  Identities=13%  Similarity=0.154  Sum_probs=175.3

Q ss_pred             ceeeeEEeccCCCceEEeeeCCC---------------eEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcc
Q psy17682         45 RRVGLVLWHPTAQNVLLTAGKEA---------------EPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANR  109 (490)
Q Consensus        45 ~~V~~v~~~p~~~~~l~s~~~D~---------------~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (490)
                      ..|..+.|+|.+ ++|.|-+...               .+.+||..+|.+......                     .+.
T Consensus        72 ~~V~~~~fSP~~-kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~---------------------~~q  129 (561)
T COG5354          72 PDVKYLDFSPNE-KYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNG---------------------ISQ  129 (561)
T ss_pred             CCceecccCccc-ceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccc---------------------cCC
Confidence            457788889988 8888876543               478888888763221110                     001


Q ss_pred             cccC-CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCC-CEEEE----
Q psy17682        110 NSTA-NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDD-NVIAS----  183 (490)
Q Consensus       110 ~~~v-~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~-~~l~s----  183 (490)
                      .... .-+.|+.+  +++.+.+    ....+.++++..+..     ......++  ...|....|+|.++ ..|+.    
T Consensus       130 ~~~~Wp~~k~s~~--D~y~ARv----v~~sl~i~e~t~n~~-----~~p~~~lr--~~gi~dFsisP~~n~~~la~~tPE  196 (561)
T COG5354         130 PYLGWPVLKFSID--DKYVARV----VGSSLYIHEITDNIE-----EHPFKNLR--PVGILDFSISPEGNHDELAYWTPE  196 (561)
T ss_pred             cccccceeeeeec--chhhhhh----ccCeEEEEecCCccc-----cCchhhcc--ccceeeEEecCCCCCceEEEEccc
Confidence            1112 24555554  2333322    445677777531111     11122222  35677888888632 22343    


Q ss_pred             -EeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe----------CCCcEEEEECCCCeeEE
Q psy17682        184 -GSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG----------SDNNVAIWNVGTGEIMI  252 (490)
Q Consensus       184 -~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~----------~dg~v~iwd~~~~~~~~  252 (490)
                       .+.++++++|.+..+..+..-.     +  ....-..+.|++.|..+++-.-          ....+.+++++......
T Consensus       197 k~~kpa~~~i~sIp~~s~l~tk~-----l--fk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V  269 (561)
T COG5354         197 KLNKPAMVRILSIPKNSVLVTKN-----L--FKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPV  269 (561)
T ss_pred             cCCCCcEEEEEEccCCCeeeeee-----e--EeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccce
Confidence             3678899999998665544321     1  1222246788888864433221          12457888887443332


Q ss_pred             EEecCCCcEEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEE
Q psy17682        253 QIECHPDIVYSASWNWDGSKLLTTC--KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSL  330 (490)
Q Consensus       253 ~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~i  330 (490)
                      .. ...++|...+|.|.++.+++.+  .+..+.++|++.. ....  ..... -..+.|+|.+++++.++-+...|.+-+
T Consensus       270 ~~-~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~--~Pe~~-rNT~~fsp~~r~il~agF~nl~gni~i  344 (561)
T COG5354         270 EK-DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFY--FPEQK-RNTIFFSPHERYILFAGFDNLQGNIEI  344 (561)
T ss_pred             ec-cccccceeeeecccCCceeEEecccccceeecccccc-eEEe--cCCcc-cccccccCcccEEEEecCCccccceEE
Confidence            22 5688999999999988777655  6788999999866 3322  22332 566789999998887665556889999


Q ss_pred             ecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEe-----cCCCeEEEEEecCCC
Q psy17682        331 RAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCG-----KGDSVIRYFEITAEP  382 (490)
Q Consensus       331 wd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g-----~~dg~i~iwd~~~~~  382 (490)
                      ||......  +...+. ......+.|+||++++....     -.|..|.|||+....
T Consensus       345 ~~~~~rf~--~~~~~~-~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~  398 (561)
T COG5354         345 FDPAGRFK--VAGAFN-GLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAK  398 (561)
T ss_pred             eccCCceE--EEEEee-cCCceEeeccCCceEEEecCCCcccccCcceEEEEecCch
Confidence            99876431  221222 23456678999999985433     237789999998764

>KOG1354|consensus

Probab=99.17  E-value=2.7e-09  Score=93.44  Aligned_cols=206  Identities=12%  Similarity=0.170  Sum_probs=145.3

Q ss_pred             cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe-----eEEEEecCC------------CcEEEEEEcCCC--CEEE
Q psy17682        214 HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE-----IMIQIECHP------------DIVYSASWNWDG--SKLL  274 (490)
Q Consensus       214 ~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~-----~~~~~~~~~------------~~v~~~~~~~~~--~~l~  274 (490)
                      ...-|.++.|...|+ +|++|..+|.|.++.-....     ....++.|.            ..|..+.|.+++  ..++
T Consensus        24 eadiis~vef~~~Ge-~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FL  102 (433)
T KOG1354|consen   24 EADIISAVEFDHYGE-RLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFL  102 (433)
T ss_pred             hhcceeeEEeecccc-eEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEE
Confidence            456789999999996 99999999999999754322     223333333            357889999865  4777


Q ss_pred             EEeCCCeEEEEeCCCCceee-----------------------------------eee-ecCCCceeEEEEeCCCcEEEE
Q psy17682        275 TTCKDKKMRIINPRTGAIEE-----------------------------------EAV-CHEGSKATRAIYLKSGLIFTT  318 (490)
Q Consensus       275 ~~~~dg~i~iwd~~~~~~~~-----------------------------------~~~-~~~~~~~~~~~~s~~~~~l~~  318 (490)
                      ..+.|.+|++|-++......                                   .+. .|. ..+.++.+..|+..+.+
T Consensus       103 lstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHt-yhiNSIS~NsD~Et~lS  181 (433)
T KOG1354|consen  103 LSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHT-YHINSISVNSDKETFLS  181 (433)
T ss_pred             EecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccce-eEeeeeeecCccceEee
Confidence            78889999999886432111                                   000 122 23778888999999988


Q ss_pred             EeCCCceeEEEEecCCCCCCCeEEEeccCCC------ceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCee---EEee
Q psy17682        319 GFSKMSERQYSLRAPDHLDEPIVMVELDTSN------GVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFV---HYIN  389 (490)
Q Consensus       319 ~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~------~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~---~~~~  389 (490)
                      +.    |-.|.+|++.-..+...+..+....      -|++..|+|....+++-.+..|.|++-|++.....-   ...+
T Consensus       182 AD----dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfE  257 (433)
T KOG1354|consen  182 AD----DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFE  257 (433)
T ss_pred             cc----ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhc
Confidence            85    8889999998777666666554432      378899999877776777889999999998432100   0111


Q ss_pred             eeeC----------CCceeeEEEeeCceeEEeec-ceeEEEEecCCC
Q psy17682        390 TFQT----------PDPQRGIGMMPKRGCDVNSC-EIGRFFRLNNSG  425 (490)
Q Consensus       390 ~~~~----------~~~i~~~~~sp~~~~l~~~~-~~~~~~~~~~~~  425 (490)
                      ....          -..|..+.|++.|+++++-+ -.+++|++....
T Consensus       258 epedp~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~  304 (433)
T KOG1354|consen  258 EPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEA  304 (433)
T ss_pred             cccCCcchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccC
Confidence            1111          13578899999999999887 489999996543

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.17  E-value=7.8e-07  Score=93.51  Aligned_cols=290  Identities=15%  Similarity=0.160  Sum_probs=161.7

Q ss_pred             cCCeeEeccccccceEEEEEeeCC---CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeC--
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKS---QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSE--  186 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~---~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~--  186 (490)
                      .-..++|-.|  ++|.++-.....   ...++||+.+      |.+..   +.+.-.+--.+++|.|.| +++|+...  
T Consensus       211 ~~~~ISWRGD--G~yFAVss~~~~~~~~R~iRVy~Re------G~L~s---tSE~v~gLe~~l~WrPsG-~lIA~~q~~~  278 (928)
T PF04762_consen  211 GRVRISWRGD--GEYFAVSSVEPETGSRRVIRVYSRE------GELQS---TSEPVDGLEGALSWRPSG-NLIASSQRLP  278 (928)
T ss_pred             CceEEEECCC--CcEEEEEEEEcCCCceeEEEEECCC------ceEEe---ccccCCCccCCccCCCCC-CEEEEEEEcC
Confidence            4456666666  577776655333   4578999865      22211   111112223467999998 88888754  


Q ss_pred             -CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee--EEEEe-cCCCcEE
Q psy17682        187 -DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI--MIQIE-CHPDIVY  262 (490)
Q Consensus       187 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~--~~~~~-~~~~~v~  262 (490)
                       ...|.+|. ++|-.-..+.-+   +......|..+.|++++. +|+..-.|. |.+|-..+..-  .+.+. .....+.
T Consensus       279 ~~~~VvFfE-rNGLrhgeF~l~---~~~~~~~v~~l~Wn~ds~-iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~  352 (928)
T PF04762_consen  279 DRHDVVFFE-RNGLRHGEFTLR---FDPEEEKVIELAWNSDSE-ILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVN  352 (928)
T ss_pred             CCcEEEEEe-cCCcEeeeEecC---CCCCCceeeEEEECCCCC-EEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCC
Confidence             35677777 455433333321   113566899999999996 888877655 99999877652  22233 1233455


Q ss_pred             EEEEcCCC-CEEEEEeCCCeEEEEeCC----CCc--------eeeee----------------------eecCCCceeEE
Q psy17682        263 SASWNWDG-SKLLTTCKDKKMRIINPR----TGA--------IEEEA----------------------VCHEGSKATRA  307 (490)
Q Consensus       263 ~~~~~~~~-~~l~~~~~dg~i~iwd~~----~~~--------~~~~~----------------------~~~~~~~~~~~  307 (490)
                      .+.|+|.. ..|...+.+|.+..++..    .+.        .+..+                      ...-...+..+
T Consensus       353 ~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~v  432 (928)
T PF04762_consen  353 FVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDV  432 (928)
T ss_pred             ceEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEE
Confidence            69999944 567666666766555432    110        01111                      11112348899


Q ss_pred             EEeCCCcEEEEEeCCCceeEEEEecCCCCCC-----CeEEEec-----------cCCCceeeeeecCCCCeEEEEecC--
Q psy17682        308 IYLKSGLIFTTGFSKMSERQYSLRAPDHLDE-----PIVMVEL-----------DTSNGVMFPLYDPDTNLVYLCGKG--  369 (490)
Q Consensus       308 ~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~-----~~~~~~~-----------~~~~~i~~~~~s~~~~~l~~~g~~--  369 (490)
                      +|++++..+++-.   .++.+.+|.......     +......           .....+..++|..+...+++....  
T Consensus       433 af~~~~~~~avl~---~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (928)
T PF04762_consen  433 AFSPSNSRFAVLT---SDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSN  509 (928)
T ss_pred             EEeCCCCeEEEEE---CCCCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecCcc
Confidence            9999987666666   578888887543221     1110000           112346778888777666444432  


Q ss_pred             CCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEec
Q psy17682        370 DSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLN  422 (490)
Q Consensus       370 dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~  422 (490)
                      ...+.++++...+..............+..+...++...++.-...++++.+.
T Consensus       510 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~G~v~~~~  562 (928)
T PF04762_consen  510 QSKIVLVDIDDSENSASVESSTEVDGVVLIISSSPDSGSLYIQTNDGKVFQLS  562 (928)
T ss_pred             cceEEEEEeccCCCceeEEEEeccCceEEEEeeCCCCcEEEEEECCCEEEEee
Confidence            36788888855432222222233334555555555554233333344444443

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.15  E-value=5.5e-08  Score=93.65  Aligned_cols=183  Identities=10%  Similarity=0.060  Sum_probs=120.0

Q ss_pred             CEEEEEEeeCCCCEEEEEeC---CCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe-C--CCeEEEEeCCCC
Q psy17682        217 RVGLVLWHPTAQNVLLTAGS---DNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-K--DKKMRIINPRTG  290 (490)
Q Consensus       217 ~v~~~~~~p~~~~~l~s~~~---dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~--dg~i~iwd~~~~  290 (490)
                      ......|+|+|+.+++..+.   +..|.++|+.+++...... ..+......|+|||+.++... .  +..|+++|+.++
T Consensus       189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g  267 (419)
T PRK04043        189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTK  267 (419)
T ss_pred             CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence            67889999999743554333   3568999998887554433 455567788999998776543 2  356888898877


Q ss_pred             ceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC
Q psy17682        291 AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD  370 (490)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d  370 (490)
                      +... +..+.. ......|+|||+.|+..++......|.+.|+.++.......  .   +.....|||||++|+++....
T Consensus       268 ~~~~-LT~~~~-~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~--~---g~~~~~~SPDG~~Ia~~~~~~  340 (419)
T PRK04043        268 TLTQ-ITNYPG-IDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVF--H---GKNNSSVSTYKNYIVYSSRET  340 (419)
T ss_pred             cEEE-cccCCC-ccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCcc--C---CCcCceECCCCCEEEEEEcCC
Confidence            6433 332222 24456799999988877754444578888988765322111  1   112358999999997776543


Q ss_pred             --------CeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee
Q psy17682        371 --------SVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS  412 (490)
Q Consensus       371 --------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~  412 (490)
                              ..|.+.|+.++..  +.+..   ........|+|||+.++..
T Consensus       341 ~~~~~~~~~~I~v~d~~~g~~--~~LT~---~~~~~~p~~SPDG~~I~f~  385 (419)
T PRK04043        341 NNEFGKNTFNLYLISTNSDYI--RRLTA---NGVNQFPRFSSDGGSIMFI  385 (419)
T ss_pred             CcccCCCCcEEEEEECCCCCe--EECCC---CCCcCCeEECCCCCEEEEE
Confidence                    3678888877752  23332   1233468999999876544

>KOG1064|consensus

Probab=99.13  E-value=2.8e-10  Score=118.68  Aligned_cols=192  Identities=16%  Similarity=0.239  Sum_probs=149.7

Q ss_pred             eecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcE
Q psy17682        161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNV  240 (490)
Q Consensus       161 ~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v  240 (490)
                      ++.|-..|.++.=+|.. .+.+||+.||.|++|....++.+..+..     . ....|+.+.|+.+| +.+..+..||.+
T Consensus      2204 ~k~~v~~v~r~~sHp~~-~~Yltgs~dgsv~~~~w~~~~~v~~~rt-----~-g~s~vtr~~f~~qG-nk~~i~d~dg~l 2275 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSHPSD-PYYLTGSQDGSVRMFEWGHGQQVVCFRT-----A-GNSRVTRSRFNHQG-NKFGIVDGDGDL 2275 (2439)
T ss_pred             eecccCceeeecCCCCC-ceEEecCCCceEEEEeccCCCeEEEeec-----c-CcchhhhhhhcccC-CceeeeccCCce
Confidence            34556778888889977 7999999999999999888776655432     2 33789999999999 488889999999


Q ss_pred             EEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe---CCCeEEEEeCCCCc---eeeeeeecCCCceeEEEEeCCCc
Q psy17682        241 AIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC---KDKKMRIINPRTGA---IEEEAVCHEGSKATRAIYLKSGL  314 (490)
Q Consensus       241 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~s~~~~  314 (490)
                      .+|... .++....+.|......+.|-.  ..+++++   .++.+.+||..-..   .+.  ..|.+. .+++++.|..+
T Consensus      2276 ~l~q~~-pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~g-aT~l~~~P~~q 2349 (2439)
T KOG1064|consen 2276 SLWQAS-PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGG-ATVLAYAPKHQ 2349 (2439)
T ss_pred             eecccC-CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceee--eecCCC-ceEEEEcCcce
Confidence            999986 677777888998899998874  6677665   46789999976432   233  577776 99999999999


Q ss_pred             EEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        315 IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       315 ~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      +|.+|+   .+|.|++||++..+....+..           ++  .+..+++|+..|.++||++....
T Consensus      2350 llisgg---r~G~v~l~D~rqrql~h~~~~-----------~~--~~~~f~~~ss~g~ikIw~~s~~~ 2401 (2439)
T KOG1064|consen 2350 LLISGG---RKGEVCLFDIRQRQLRHTFQA-----------LD--TREYFVTGSSEGNIKIWRLSEFG 2401 (2439)
T ss_pred             EEEecC---CcCcEEEeehHHHHHHHHhhh-----------hh--hhheeeccCcccceEEEEccccc
Confidence            999998   799999999986442111111           33  33345899999999999998864

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.11  E-value=3.7e-07  Score=84.42  Aligned_cols=344  Identities=11%  Similarity=0.060  Sum_probs=200.4

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK  104 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (490)
                      +..|.......+-..+..-.-++..++|||.| .+|++.-. ..|.+|.-.......                 .     
T Consensus        13 i~~f~~~~s~~~~~~~~~~~~p~~~~~~SP~G-~~l~~~~~-~~V~~~~g~~~~~l~-----------------~-----   68 (561)
T COG5354          13 ISVFWNSQSEVIHTRFESENWPVAYVSESPLG-TYLFSEHA-AGVECWGGPSKAKLV-----------------R-----   68 (561)
T ss_pred             EEEeecCccccccccccccCcchhheeecCcc-hheehhhc-cceEEccccchhhee-----------------e-----
Confidence            33344444444444455577889999999999 78886655 566888755432100                 0     


Q ss_pred             CCCcccccCCeeEeccccccceEEE------------EEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCC--ee-
Q psy17682        105 GGANRNSTANEITISEDYVKEFKEE------------IRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGP--VL-  169 (490)
Q Consensus       105 ~~~~~~~~v~~~~~s~~~~~~~~~~------------~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~--V~-  169 (490)
                         .....+..+.|||..  +++..            +.--...+.+.+|+..     .+.+   +..+.+-..+  .+ 
T Consensus        69 ---~~~~~V~~~~fSP~~--kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~-----sg~i---v~sf~~~~q~~~~Wp  135 (561)
T COG5354          69 ---FRHPDVKYLDFSPNE--KYLVTWSREPIIEPEIEISPFTSKNNVFVWDIA-----SGMI---VFSFNGISQPYLGWP  135 (561)
T ss_pred             ---eecCCceecccCccc--ceeeeeccCCccChhhccCCccccCceeEEecc-----Ccee---EeeccccCCcccccc
Confidence               011123444444442  11111            1111223357777774     3322   2222333333  44 


Q ss_pred             EEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCC-EEEE-----EeCCCcEEEE
Q psy17682        170 DIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQN-VLLT-----AGSDNNVAIW  243 (490)
Q Consensus       170 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s-----~~~dg~v~iw  243 (490)
                      -+.|+.++ .++|--. ...+.|+++ ++....   .|...+  ....|....|+|.+.+ .|+.     .+.++.+++|
T Consensus       136 ~~k~s~~D-~y~ARvv-~~sl~i~e~-t~n~~~---~p~~~l--r~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~  207 (561)
T COG5354         136 VLKFSIDD-KYVARVV-GSSLYIHEI-TDNIEE---HPFKNL--RPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRIL  207 (561)
T ss_pred             eeeeeecc-hhhhhhc-cCeEEEEec-CCcccc---Cchhhc--cccceeeEEecCCCCCceEEEEccccCCCCcEEEEE
Confidence            57888776 5655443 347999997 333211   122222  2356888999997432 3333     3567889999


Q ss_pred             ECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe-----------CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC
Q psy17682        244 NVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-----------KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS  312 (490)
Q Consensus       244 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~  312 (490)
                      .+..+..+.+-.-....=..+.|++.|++|+.--           ....++|++++........ ...+ ++...+|.|.
T Consensus       208 sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~-~~~~-pVhdf~W~p~  285 (561)
T COG5354         208 SIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEK-DLKD-PVHDFTWEPL  285 (561)
T ss_pred             EccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceec-cccc-cceeeeeccc
Confidence            9987766554332222334688999998766432           1246889988844433222 2233 5999999999


Q ss_pred             CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEe--cCCCeEEEEEecCCCCeeEEeee
Q psy17682        313 GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCG--KGDSVIRYFEITAEPPFVHYINT  390 (490)
Q Consensus       313 ~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g--~~dg~i~iwd~~~~~~~~~~~~~  390 (490)
                      ++.+++.+.- ....+.++|++..     +........-..+.|+|.++++++.|  ..-|.|-+||......   ....
T Consensus       286 S~~F~vi~g~-~pa~~s~~~lr~N-----l~~~~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~---~~~~  356 (561)
T COG5354         286 SSRFAVISGY-MPASVSVFDLRGN-----LRFYFPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFK---VAGA  356 (561)
T ss_pred             CCceeEEecc-cccceeecccccc-----eEEecCCcccccccccCcccEEEEecCCccccceEEeccCCceE---EEEE
Confidence            8877655411 5778899999864     12222234456788999999996654  3347899999987642   2222


Q ss_pred             eeCCCceeeEEEeeCceeEEee--------cceeEEEEecCCC
Q psy17682        391 FQTPDPQRGIGMMPKRGCDVNS--------CEIGRFFRLNNSG  425 (490)
Q Consensus       391 ~~~~~~i~~~~~sp~~~~l~~~--------~~~~~~~~~~~~~  425 (490)
                      +.. ....-+.|+||+.++-..        +..+++|++....
T Consensus       357 ~~~-~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~  398 (561)
T COG5354         357 FNG-LNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAK  398 (561)
T ss_pred             eec-CCceEeeccCCceEEEecCCCcccccCcceEEEEecCch
Confidence            332 245667899999886654        2256788877654

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.11  E-value=4.9e-09  Score=90.54  Aligned_cols=208  Identities=14%  Similarity=0.258  Sum_probs=137.4

Q ss_pred             cCCeeEEEECCC-CCCEEEEEeCCCcEEEEECCCCCcc----------------------cccc-------------cce
Q psy17682        165 KGPVLDIAWSPH-DDNVIASGSEDCVVKVWQIPDGGIS----------------------RTLT-------------EPV  208 (490)
Q Consensus       165 ~~~V~~~~~~p~-~~~~l~s~~~dg~i~iwd~~~~~~~----------------------~~~~-------------~~~  208 (490)
                      ...|..+.|..+ +.+.++..+.|.+|++|.+......                      +.+.             .|.
T Consensus        85 eEKin~I~w~~~t~r~hFLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~  164 (460)
T COG5170          85 EEKINAIEWFDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPC  164 (460)
T ss_pred             HHHhhheeeecCCCcceEEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccc
Confidence            356777887643 4567777889999999987543110                      0000             111


Q ss_pred             eee-cccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe---eEEEEecCC-----CcEEEEEEcCCC-CEEEEEeC
Q psy17682        209 VDL-LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE---IMIQIECHP-----DIVYSASWNWDG-SKLLTTCK  278 (490)
Q Consensus       209 ~~~-~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~-----~~v~~~~~~~~~-~~l~~~~~  278 (490)
                      ... ..|.--+.++.|+.+.+ .++++ .|-.|.+|++.-..   .+..++.|.     .-|++..|+|.. ..+.-.+.
T Consensus       165 rvyaNaH~yhiNSiS~NsD~e-t~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsS  242 (460)
T COG5170         165 RVYANAHPYHINSISFNSDKE-TLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSS  242 (460)
T ss_pred             eeccccceeEeeeeeecCchh-eeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecC
Confidence            111 34777789999999876 55555 67889999987432   233334443     347889999944 56777778


Q ss_pred             CCeEEEEeCCCCcee----eee--e----------ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE
Q psy17682        279 DKKMRIINPRTGAIE----EEA--V----------CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM  342 (490)
Q Consensus       279 dg~i~iwd~~~~~~~----~~~--~----------~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~  342 (490)
                      .|.|++-|+|.....    ..+  .          .-.. .+..+.|+++|+++++-.    --+++|||.+....+...
T Consensus       243 kG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivs-SISD~kFs~ngryIlsRd----yltvkiwDvnm~k~pikT  317 (460)
T COG5170         243 KGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVS-SISDFKFSDNGRYILSRD----YLTVKIWDVNMAKNPIKT  317 (460)
T ss_pred             CCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhh-hhcceEEcCCCcEEEEec----cceEEEEecccccCCcee
Confidence            899999999954211    001  0          1111 378889999999998874    678999999987776655


Q ss_pred             EeccC-----------CCce---eeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        343 VELDT-----------SNGV---MFPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       343 ~~~~~-----------~~~i---~~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      ...+.           ...|   ..+.||.|.+.+ .+|+..+..-+|-..+
T Consensus       318 i~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v-~sgsy~NNfgiyp~~s  368 (460)
T COG5170         318 IPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHV-LSGSYSNNFGIYPTDS  368 (460)
T ss_pred             echHHHHHHHHHhhhhccceeeeEEEEecCCcccc-cccccccceeeecccc
Confidence            42211           1122   457889998888 7899888888887543

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.11  E-value=1.1e-07  Score=101.66  Aligned_cols=256  Identities=7%  Similarity=0.036  Sum_probs=158.0

Q ss_pred             eEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccc-eee------ecccccCEEEEEEeeCCCCEEEEEeCCCcEE
Q psy17682        169 LDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEP-VVD------LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVA  241 (490)
Q Consensus       169 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~------~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~  241 (490)
                      ..+++++.++.++++-+..+.|+++|.. ++.+..+... ..-      -.++-.....+++.+++..++++-..++.|+
T Consensus       571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~-G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir  649 (1057)
T PLN02919        571 GKLAIDLLNNRLFISDSNHNRIVVTDLD-GNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALR  649 (1057)
T ss_pred             ceEEEECCCCeEEEEECCCCeEEEEeCC-CCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEE
Confidence            4678887654778888888999999975 4433222110 000      0011224578999998743344444567899


Q ss_pred             EEECCCCeeEEEEecC-----------------CCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeeeeec----
Q psy17682        242 IWNVGTGEIMIQIECH-----------------PDIVYSASWNW-DGSKLLTTCKDKKMRIINPRTGAIEEEAVCH----  299 (490)
Q Consensus       242 iwd~~~~~~~~~~~~~-----------------~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----  299 (490)
                      ++|+.++. +.++.+.                 -.....++++| ++..+++.+.++.|++||..++... .+.+.    
T Consensus       650 ~id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~  727 (1057)
T PLN02919        650 EIDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYER  727 (1057)
T ss_pred             EEecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCccc
Confidence            99987764 3333210                 11245799999 5667777778899999999876532 22110    


Q ss_pred             ----------CCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE----------EeccC---------CCc
Q psy17682        300 ----------EGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM----------VELDT---------SNG  350 (490)
Q Consensus       300 ----------~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~----------~~~~~---------~~~  350 (490)
                                .-.....++++|+|..|.++..  .++.|++||+.++......          ..+..         ...
T Consensus       728 ~~~g~~~~~~~~~~P~GIavspdG~~LYVADs--~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~  805 (1057)
T PLN02919        728 NLNGSSGTSTSFAQPSGISLSPDLKELYIADS--ESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQH  805 (1057)
T ss_pred             cCCCCccccccccCccEEEEeCCCCEEEEEEC--CCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccC
Confidence                      0112567999999875544432  4689999998865421110          00000         112


Q ss_pred             eeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee------------CCCceeeEEEeeCceeEEee--ccee
Q psy17682        351 VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ------------TPDPQRGIGMMPKRGCDVNS--CEIG  416 (490)
Q Consensus       351 i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~------------~~~~i~~~~~sp~~~~l~~~--~~~~  416 (490)
                      ...++++++|+. +++-+.++.|++||..++. .. .+....            .-....+++++++|.++++.  ...+
T Consensus       806 P~Gvavd~dG~L-YVADs~N~rIrviD~~tg~-v~-tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~I  882 (1057)
T PLN02919        806 PLGVLCAKDGQI-YVADSYNHKIKKLDPATKR-VT-TLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLI  882 (1057)
T ss_pred             CceeeEeCCCcE-EEEECCCCEEEEEECCCCe-EE-EEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEE
Confidence            357889999985 4788889999999998764 11 111110            01246789999999987766  3478


Q ss_pred             EEEEecCCCceEEEEE
Q psy17682        417 RFFRLNNSGLCQVVSM  432 (490)
Q Consensus       417 ~~~~~~~~~~~~~i~~  432 (490)
                      ++|++.++...+...+
T Consensus       883 rvid~~~~~~~~~~~l  898 (1057)
T PLN02919        883 RYLDLNKGEAAEILTL  898 (1057)
T ss_pred             EEEECCCCccceeEee
Confidence            8999888763344443

>KOG2315|consensus

Probab=99.11  E-value=3.4e-08  Score=92.15  Aligned_cols=207  Identities=14%  Similarity=0.166  Sum_probs=134.3

Q ss_pred             cccCCeeEeccccccceEEEEE--eeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCC
Q psy17682        110 NSTANEITISEDYVKEFKEEIR--KLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSED  187 (490)
Q Consensus       110 ~~~v~~~~~s~~~~~~~~~~~~--~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~d  187 (490)
                      ...+..+.+||.....+.++..  ..+.-..+++|.....  ...........+   ...=..+.|++-|..+|+.++.|
T Consensus       165 ~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~--~~~~~~a~ksFF---kadkvqm~WN~~gt~LLvLastd  239 (566)
T KOG2315|consen  165 VSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEE--GQHQPVANKSFF---KADKVQMKWNKLGTALLVLASTD  239 (566)
T ss_pred             ccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccc--cccchhhhcccc---ccceeEEEeccCCceEEEEEEEe
Confidence            3456777777775444444322  2344457888876510  000000011111   22233578888775555555432


Q ss_pred             -----------CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEE-EEEeCCCcEEEEECCCCeeEEEEe
Q psy17682        188 -----------CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVL-LTAGSDNNVAIWNVGTGEIMIQIE  255 (490)
Q Consensus       188 -----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~  255 (490)
                                 .++.+.+++...+...+        ...++|.++.|+|++..+. +-|-.-.++.|||++ +.++..+.
T Consensus       240 VDktn~SYYGEq~Lyll~t~g~s~~V~L--------~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~  310 (566)
T KOG2315|consen  240 VDKTNASYYGEQTLYLLATQGESVSVPL--------LKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFP  310 (566)
T ss_pred             ecCCCccccccceEEEEEecCceEEEec--------CCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCC
Confidence                       35777776622222221        1578999999999986332 334456789999985 67777664


Q ss_pred             cCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCC---CceeEEE
Q psy17682        256 CHPDIVYSASWNWDGSKLLTTCKD---KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSK---MSERQYS  329 (490)
Q Consensus       256 ~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~---~~~~~i~  329 (490)
                        .++=+++-|+|.|++|+.++.+   |.+-+||+.+.+++..+....   .+-..|+|||+++++++..   ..|+.++
T Consensus       311 --egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~---tt~~eW~PdGe~flTATTaPRlrvdNg~K  385 (566)
T KOG2315|consen  311 --EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN---TTVFEWSPDGEYFLTATTAPRLRVDNGIK  385 (566)
T ss_pred             --CCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCC---ceEEEEcCCCcEEEEEeccccEEecCCeE
Confidence              5667899999999999988864   789999999988888776543   5778899999999988632   2367799


Q ss_pred             EecCCC
Q psy17682        330 LRAPDH  335 (490)
Q Consensus       330 iwd~~~  335 (490)
                      ||+...
T Consensus       386 iwhytG  391 (566)
T KOG2315|consen  386 IWHYTG  391 (566)
T ss_pred             EEEecC
Confidence            999875

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.10  E-value=1.7e-07  Score=100.29  Aligned_cols=272  Identities=10%  Similarity=0.096  Sum_probs=156.3

Q ss_pred             eeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceE
Q psy17682         48 GLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFK  127 (490)
Q Consensus        48 ~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~  127 (490)
                      ..+++++.+..++++-...+.|+++|........         +......-.. .+......-.....+++.++.    .
T Consensus       571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~i~~---------ig~~g~~G~~-dG~~~~a~f~~P~GIavd~~g----n  636 (1057)
T PLN02919        571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNFIVQ---------IGSTGEEGLR-DGSFEDATFNRPQGLAYNAKK----N  636 (1057)
T ss_pred             ceEEEECCCCeEEEEECCCCeEEEEeCCCCEEEE---------EccCCCcCCC-CCchhccccCCCcEEEEeCCC----C
Confidence            3678887654778877778899999876432100         0000000000 000001112234667776653    1


Q ss_pred             EEEEeeCCCceEEEECCCCCCCCcccC-CCCcceeecc-------cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682        128 EEIRKLKSQQALSILPPPSTAPNTGRI-NADHALVGGH-------KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG  199 (490)
Q Consensus       128 ~~~~~~~~~g~i~v~~~~~~~~~~~~~-~~~~~~~~~h-------~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~  199 (490)
                      .+.++-..++.|+++++.......-.- ...-..+.+.       -..-.+++++|+++.++++.+.++.|++||..++.
T Consensus       637 ~LYVaDt~n~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~  716 (1057)
T PLN02919        637 LLYVADTENHALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGV  716 (1057)
T ss_pred             EEEEEeCCCceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCe
Confidence            123334455677877764211100000 0000000000       12335899999655778888888999999987664


Q ss_pred             cccccccce--eeec------ccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec-------------C-
Q psy17682        200 ISRTLTEPV--VDLL------YHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-------------H-  257 (490)
Q Consensus       200 ~~~~~~~~~--~~~~------~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-------------~-  257 (490)
                      .. .+....  ....      ..-.....++++|+++.++++-+.++.|++||+.++.......+             . 
T Consensus       717 v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~d  795 (1057)
T PLN02919        717 TR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHD  795 (1057)
T ss_pred             EE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCC
Confidence            32 111000  0000      01134578999999865667777789999999987653211100             0 


Q ss_pred             -------CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecC-------------CCceeEEEEeCCCcEEE
Q psy17682        258 -------PDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHE-------------GSKATRAIYLKSGLIFT  317 (490)
Q Consensus       258 -------~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------------~~~~~~~~~s~~~~~l~  317 (490)
                             -.....++++++|+.+++-+.++.|++||..++...... +..             -..+..++++++|++++
T Consensus       796 G~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tia-G~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyV  874 (1057)
T PLN02919        796 GVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLA-GTGKAGFKDGKALKAQLSEPAGLALGENGRLFV  874 (1057)
T ss_pred             CchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEe-ccCCcCCCCCcccccccCCceEEEEeCCCCEEE
Confidence                   112458899999998888889999999999877654322 111             01367899999999887


Q ss_pred             EEeCCCceeEEEEecCCCCCC
Q psy17682        318 TGFSKMSERQYSLRAPDHLDE  338 (490)
Q Consensus       318 ~~~~~~~~~~i~iwd~~~~~~  338 (490)
                      +-+   .++.|++||+.+...
T Consensus       875 aDt---~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        875 ADT---NNSLIRYLDLNKGEA  892 (1057)
T ss_pred             EEC---CCCEEEEEECCCCcc
Confidence            766   688999999987653

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.06  E-value=1.2e-07  Score=86.77  Aligned_cols=179  Identities=15%  Similarity=0.120  Sum_probs=134.2

Q ss_pred             ECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC-cEEEEECCCCeeE
Q psy17682        173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN-NVAIWNVGTGEIM  251 (490)
Q Consensus       173 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-~v~iwd~~~~~~~  251 (490)
                      |++..+.+++..|. |+..|.+...+-.++         .+|.+.|.-..+.-+++ -++.|..|| .+-|+|.++++. 
T Consensus       327 fa~~~Gd~ia~VSR-GkaFi~~~~~~~~iq---------v~~~~~VrY~r~~~~~e-~~vigt~dgD~l~iyd~~~~e~-  394 (668)
T COG4946         327 FAVVNGDYIALVSR-GKAFIMRPWDGYSIQ---------VGKKGGVRYRRIQVDPE-GDVIGTNDGDKLGIYDKDGGEV-  394 (668)
T ss_pred             hccCCCcEEEEEec-CcEEEECCCCCeeEE---------cCCCCceEEEEEccCCc-ceEEeccCCceEEEEecCCceE-
Confidence            44444478888875 677777755443322         23778899888888875 788999998 899999987764 


Q ss_pred             EEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCC-ceeEEEE
Q psy17682        252 IQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKM-SERQYSL  330 (490)
Q Consensus       252 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~-~~~~i~i  330 (490)
                      ..+...-+.|.++..+|+|++++++.....|.+.|+.++.....-+...+ -++...|+|+++++|-+..++ ....|++
T Consensus       395 kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~-lItdf~~~~nsr~iAYafP~gy~tq~Ikl  473 (668)
T COG4946         395 KRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYG-LITDFDWHPNSRWIAYAFPEGYYTQSIKL  473 (668)
T ss_pred             EEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccc-eeEEEEEcCCceeEEEecCcceeeeeEEE
Confidence            44555778899999999999999999999999999999986544444444 499999999999999887433 3457999


Q ss_pred             ecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEe
Q psy17682        331 RAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCG  367 (490)
Q Consensus       331 wd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g  367 (490)
                      +|+...+.   .........-.+.+|.||+++|+..+
T Consensus       474 ydm~~~Ki---y~vTT~ta~DfsPaFD~d~ryLYfLs  507 (668)
T COG4946         474 YDMDGGKI---YDVTTPTAYDFSPAFDPDGRYLYFLS  507 (668)
T ss_pred             EecCCCeE---EEecCCcccccCcccCCCCcEEEEEe
Confidence            99997642   11112233357889999999997765

>KOG4532|consensus

Probab=99.03  E-value=8.1e-08  Score=81.55  Aligned_cols=245  Identities=10%  Similarity=0.035  Sum_probs=153.6

Q ss_pred             eEEEECCC----CCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682        169 LDIAWSPH----DDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN  244 (490)
Q Consensus       169 ~~~~~~p~----~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd  244 (490)
                      ..+.|.|-    ...+|+.|+..|...+|...+.+....+      ...|...|+-+.=..+....+..++.|.++++.+
T Consensus        71 ~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~------cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~  144 (344)
T KOG4532|consen   71 TGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQ------CDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMV  144 (344)
T ss_pred             ecccccchHhhccccEEEeccccceeeeecccCcccceee------ecccccchhhhhhhcccccceeeccCCcceeEEE
Confidence            34556552    1258999999999999998766543221      1113333332222222233567788899999988


Q ss_pred             CCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eeeeeeecCCCceeEEEEeCCCcEEEEEeCC
Q psy17682        245 VGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGA--IEEEAVCHEGSKATRAIYLKSGLIFTTGFSK  322 (490)
Q Consensus       245 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~  322 (490)
                      +.-+.....+....-.+.+++++++++++++.+....|..|.+....  .+.+........--+..|+.....+|+++  
T Consensus       145 ~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~--  222 (344)
T KOG4532|consen  145 VSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVF--  222 (344)
T ss_pred             EecCcccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEe--
Confidence            86544332222112338899999999999999999999999987542  22323333333356778999999999999  


Q ss_pred             CceeEEEEecCCCCCCCeEEE---eccCCCceeeeeecCCCC--eEEEEecCCCeEEEEEecCCCCeeEEeee----eeC
Q psy17682        323 MSERQYSLRAPDHLDEPIVMV---ELDTSNGVMFPLYDPDTN--LVYLCGKGDSVIRYFEITAEPPFVHYINT----FQT  393 (490)
Q Consensus       323 ~~~~~i~iwd~~~~~~~~~~~---~~~~~~~i~~~~~s~~~~--~l~~~g~~dg~i~iwd~~~~~~~~~~~~~----~~~  393 (490)
                       .||++.|||++....+....   ..+|.+.+..+.|++.|.  +|+. .-.-+.+.+-|+++.......+..    +.+
T Consensus       223 -Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~-sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~  300 (344)
T KOG4532|consen  223 -QDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFI-SEHFSRVHVVDTRNYVNHQVIVIPDDVERKH  300 (344)
T ss_pred             -cCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEE-ecCcceEEEEEcccCceeeEEecCccccccc
Confidence             79999999999877654432   335667799999998764  3433 334578999999998743322211    111


Q ss_pred             -CCceeeEEEeeCceeEEeecc-eeEEEEecC
Q psy17682        394 -PDPQRGIGMMPKRGCDVNSCE-IGRFFRLNN  423 (490)
Q Consensus       394 -~~~i~~~~~sp~~~~l~~~~~-~~~~~~~~~  423 (490)
                       ...|.+-.|+.++.-.-+..+ .+.-|++..
T Consensus       301 ~tq~ifgt~f~~~n~s~~v~~e~~~ae~ni~s  332 (344)
T KOG4532|consen  301 NTQHIFGTNFNNENESNDVKNELQGAEYNILS  332 (344)
T ss_pred             cccccccccccCCCcccccccchhhheeeccc
Confidence             133666777766644333332 333344443

>KOG4190|consensus

Probab=99.00  E-value=1.6e-09  Score=100.51  Aligned_cols=214  Identities=13%  Similarity=0.125  Sum_probs=143.7

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      ...+.||...|..++--. +++-+++++.|.+|++|.++.............++..|..+|.++-|..+.+ .++  +.|
T Consensus       728 L~nf~GH~~~iRai~Aid-NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr-~i~--ScD  803 (1034)
T KOG4190|consen  728 LCNFTGHQEKIRAIAAID-NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLR-SIA--SCD  803 (1034)
T ss_pred             eecccCcHHHhHHHHhcc-cccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccc-eee--ecc
Confidence            345679999999987654 3488999999999999999754333332334556778999999999998864 444  468


Q ss_pred             CcEEEEECCCCeeEEEEe--cCCCcEEEEEEcC--CCCEEEEE-eCCCeEEEEeCCCCceeeeeeec----CCCceeEEE
Q psy17682        238 NNVAIWNVGTGEIMIQIE--CHPDIVYSASWNW--DGSKLLTT-CKDKKMRIINPRTGAIEEEAVCH----EGSKATRAI  308 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~--~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~~~  308 (490)
                      |-|.+||.--+.++..+.  ...+.+..+..-+  +...++++ +...+++++|.+..+....++.-    .+..+.+++
T Consensus       804 ~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~ia  883 (1034)
T KOG4190|consen  804 GGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIA  883 (1034)
T ss_pred             CcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEE
Confidence            899999987666655332  1122222232223  33444444 67889999999998766666521    123478899


Q ss_pred             EeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEE-EEecCCC
Q psy17682        309 YLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRY-FEITAEP  382 (490)
Q Consensus       309 ~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~i-wd~~~~~  382 (490)
                      ..+.|+.++++-   ..|.|.+.|.+++........  -......++ .|..+.| +....|..+.+ |...++.
T Consensus       884 Va~~GN~lAa~L---SnGci~~LDaR~G~vINswrp--mecdllqla-apsdq~L-~~saldHslaVnWhaldgi  951 (1034)
T KOG4190|consen  884 VADKGNKLAAAL---SNGCIAILDARNGKVINSWRP--MECDLLQLA-APSDQAL-AQSALDHSLAVNWHALDGI  951 (1034)
T ss_pred             eccCcchhhHHh---cCCcEEEEecCCCceeccCCc--ccchhhhhc-CchhHHH-HhhcccceeEeeehhcCCe
Confidence            999999999987   689999999998762211111  111122222 4566676 56667888888 8877664

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.99  E-value=1.9e-06  Score=77.58  Aligned_cols=215  Identities=15%  Similarity=0.126  Sum_probs=137.2

Q ss_pred             eEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEe-eCCCCEEEEEeCCCcEEEEECCC
Q psy17682        169 LDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWH-PTAQNVLLTAGSDNNVAIWNVGT  247 (490)
Q Consensus       169 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~l~s~~~dg~v~iwd~~~  247 (490)
                      .++.|.+..+.++++--..+.|..|+..++.... +.        . ....++++. +++  .++.+...+ +.++|..+
T Consensus         3 Egp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~--------~-~~~~G~~~~~~~g--~l~v~~~~~-~~~~d~~~   69 (246)
T PF08450_consen    3 EGPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-ID--------L-PGPNGMAFDRPDG--RLYVADSGG-IAVVDPDT   69 (246)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EE--------S-SSEEEEEEECTTS--EEEEEETTC-EEEEETTT
T ss_pred             cceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-Ee--------c-CCCceEEEEccCC--EEEEEEcCc-eEEEecCC
Confidence            3678988444788887788999999987764422 11        1 126778888 564  456665544 56669988


Q ss_pred             CeeEEEEec-----CCCcEEEEEEcCCCCEEEEEeCC--------CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc
Q psy17682        248 GEIMIQIEC-----HPDIVYSASWNWDGSKLLTTCKD--------KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL  314 (490)
Q Consensus       248 ~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~  314 (490)
                      ++.......     .....+.+++.|+|++.++....        |.|..++.. ++....... -. ....++|+|+++
T Consensus        70 g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~-~~-~pNGi~~s~dg~  146 (246)
T PF08450_consen   70 GKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADG-LG-FPNGIAFSPDGK  146 (246)
T ss_dssp             TEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEE-ES-SEEEEEEETTSS
T ss_pred             CcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecC-cc-cccceEECCcch
Confidence            865443332     34568899999999977776643        568888877 554333332 22 378999999998


Q ss_pred             EEEEEeCCCceeEEEEecCCCCCC-C---eEEEeccCCC-ceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEee
Q psy17682        315 IFTTGFSKMSERQYSLRAPDHLDE-P---IVMVELDTSN-GVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYIN  389 (490)
Q Consensus       315 ~l~~~~~~~~~~~i~iwd~~~~~~-~---~~~~~~~~~~-~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~  389 (490)
                      .|.....  ..+.|..+++..... .   ..+....... ..-.++++.+|+.. ++....+.|.+++.. ++ +...+ 
T Consensus       147 ~lyv~ds--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~-va~~~~~~I~~~~p~-G~-~~~~i-  220 (246)
T PF08450_consen  147 TLYVADS--FNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLW-VADWGGGRIVVFDPD-GK-LLREI-  220 (246)
T ss_dssp             EEEEEET--TTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EE-EEEETTTEEEEEETT-SC-EEEEE-
T ss_pred             heeeccc--ccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEE-EEEcCCCEEEEECCC-cc-EEEEE-
Confidence            7765432  467788888864433 1   1222222222 36789999999876 666678899999987 65 22223 


Q ss_pred             eeeCC-CceeeEEEe-eCce
Q psy17682        390 TFQTP-DPQRGIGMM-PKRG  407 (490)
Q Consensus       390 ~~~~~-~~i~~~~~s-p~~~  407 (490)
                        ..+ ..+++++|. |+..
T Consensus       221 --~~p~~~~t~~~fgg~~~~  238 (246)
T PF08450_consen  221 --ELPVPRPTNCAFGGPDGK  238 (246)
T ss_dssp             --E-SSSSEEEEEEESTTSS
T ss_pred             --cCCCCCEEEEEEECCCCC
Confidence              322 478999995 5543

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG2041|consensus

Probab=98.99  E-value=1.1e-08  Score=97.80  Aligned_cols=236  Identities=16%  Similarity=0.161  Sum_probs=162.2

Q ss_pred             ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccc--------cceeeecccccCEEEEEEeeCCCCEEEEEe
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLT--------EPVVDLLYHQRRVGLVLWHPTAQNVLLTAG  235 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~  235 (490)
                      ......|+.|+... .+++.|+.||.+++-.+.+...-....        .-.+.+.||...|.-+.|+.+.+ .|.+..
T Consensus        13 nnvkL~c~~WNke~-gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~Q-KLTtSD   90 (1189)
T KOG2041|consen   13 NNVKLHCAEWNKES-GYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQ-KLTTSD   90 (1189)
T ss_pred             CCceEEEEEEcccC-CeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccc-cccccC
Confidence            34568899999876 799999999999999886543211111        11345789999999999999875 788999


Q ss_pred             CCCcEEEEECCCCeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee-eeeeecCCCceeEEEEeCC
Q psy17682        236 SDNNVAIWNVGTGEIMIQIE--CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIE-EEAVCHEGSKATRAIYLKS  312 (490)
Q Consensus       236 ~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~s~~  312 (490)
                      .+|.|.+|-+-.+.-...+.  ..++.|.+++|+.+|..|...-.||.|.+=.+...+.- +.++   +.....+.|++|
T Consensus        91 t~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLk---g~~l~hv~ws~D  167 (1189)
T KOG2041|consen   91 TSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELK---GQLLAHVLWSED  167 (1189)
T ss_pred             CCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcc---hheccceeeccc
Confidence            99999999988776443332  34677899999999999999999999888776643321 1122   222567889999


Q ss_pred             CcEEEEEeCCCceeEEEEecCCCCCCC-------eEEEec--cCCCceeeeee--------cCCCCeEEEEecCCCeEEE
Q psy17682        313 GLIFTTGFSKMSERQYSLRAPDHLDEP-------IVMVEL--DTSNGVMFPLY--------DPDTNLVYLCGKGDSVIRY  375 (490)
Q Consensus       313 ~~~l~~~~~~~~~~~i~iwd~~~~~~~-------~~~~~~--~~~~~i~~~~~--------s~~~~~l~~~g~~dg~i~i  375 (490)
                      .+.+..+-   ..|.+.++|....-..       ......  .....+..+.|        -||...+ +.+-..|.+.|
T Consensus       168 ~~~~Lf~~---ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~l-avcy~nGr~Qi  243 (1189)
T KOG2041|consen  168 LEQALFKK---ANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRL-AVCYANGRMQI  243 (1189)
T ss_pred             HHHHHhhh---cCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEE-EEEEcCceehh
Confidence            88777765   5788999997643211       111000  00111333443        2466666 67778899988


Q ss_pred             EEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee
Q psy17682        376 FEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS  412 (490)
Q Consensus       376 wd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~  412 (490)
                      ..-.+...+.  +  +..+-.+.+..|+++|.+++..
T Consensus       244 MR~eND~~Pv--v--~dtgm~~vgakWnh~G~vLAvc  276 (1189)
T KOG2041|consen  244 MRSENDPEPV--V--VDTGMKIVGAKWNHNGAVLAVC  276 (1189)
T ss_pred             hhhcCCCCCe--E--EecccEeecceecCCCcEEEEc
Confidence            8766554221  1  2333568899999999887754

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.98  E-value=8.2e-07  Score=76.74  Aligned_cols=205  Identities=12%  Similarity=0.082  Sum_probs=114.5

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCC-----CCEEEEEeCCCcE
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTA-----QNVLLTAGSDNNV  240 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-----~~~l~s~~~dg~v  240 (490)
                      -.-..++|+||+ .+||.+...|+|+++|+... .+..+.........-...|.++.|.+-.     ...|++-...|.+
T Consensus        44 PQWRkl~WSpD~-tlLa~a~S~G~i~vfdl~g~-~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L  121 (282)
T PF15492_consen   44 PQWRKLAWSPDC-TLLAYAESTGTIRVFDLMGS-ELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQL  121 (282)
T ss_pred             chheEEEECCCC-cEEEEEcCCCeEEEEecccc-eeEEcCcccccCCccccceeeeEeeccccccccceeEEEEecccee
Confidence            345678999998 89999999999999998643 3344433221122234567777775532     2356666788888


Q ss_pred             EEEECCC-----CeeEEEEe---cCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEeCCCCceeeeeeecCCCceeEEEEeC
Q psy17682        241 AIWNVGT-----GEIMIQIE---CHPDIVYSASWNWDGSKLLTTCKDKK-MRIINPRTGAIEEEAVCHEGSKATRAIYLK  311 (490)
Q Consensus       241 ~iwd~~~-----~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~  311 (490)
                      +-|-+..     .+...++.   .+...|.++.++|..++|++|+.... -.... ....-+...+.-.+.+......+.
T Consensus       122 ~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~-a~~~GLtaWRiL~~~Pyyk~v~~~  200 (282)
T PF15492_consen  122 RSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSK-ASSCGLTAWRILSDSPYYKQVTSS  200 (282)
T ss_pred             eeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCcccc-ccccCceEEEEcCCCCcEEEcccc
Confidence            8777532     22333433   34678999999999998888774322 00000 000001111111111111111111


Q ss_pred             CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        312 SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       312 ~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      +..+-...      ....+|.+-+..  ...........|..+..||||+.| ++...+|.|.+|++.+-+
T Consensus       201 ~~~~~~~~------~~~~~~~~~~~~--~fs~~~~~~d~i~kmSlSPdg~~L-a~ih~sG~lsLW~iPsL~  262 (282)
T PF15492_consen  201 EDDITASS------KRRGLLRIPSFK--FFSRQGQEQDGIFKMSLSPDGSLL-ACIHFSGSLSLWEIPSLR  262 (282)
T ss_pred             Cccccccc------cccceeecccee--eeeccccCCCceEEEEECCCCCEE-EEEEcCCeEEEEecCcch
Confidence            11111110      111223222111  011112345679999999999999 788899999999998764

>KOG4532|consensus

Probab=98.97  E-value=3.4e-07  Score=77.83  Aligned_cols=243  Identities=9%  Similarity=0.029  Sum_probs=150.2

Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI  195 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~  195 (490)
                      +.|-|...-.-...++.++..|.+.+|.....+.       .......|...|+-+.=..+....+..++.|.++++.++
T Consensus        73 ~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~-------h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~  145 (344)
T KOG4532|consen   73 MTFTPGSFINKCVTLADGGASGQFDLFACNTNDG-------HLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVV  145 (344)
T ss_pred             ccccchHhhccccEEEeccccceeeeecccCccc-------ceeeecccccchhhhhhhcccccceeeccCCcceeEEEE
Confidence            3344433333345688888999999998862221       112223344433322222223345777888999999988


Q ss_pred             CCCCcccccccceeeeccccc--CEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC-eeEEE--EecCCCcEEEEEEcCCC
Q psy17682        196 PDGGISRTLTEPVVDLLYHQR--RVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG-EIMIQ--IECHPDIVYSASWNWDG  270 (490)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~-~~~~~--~~~~~~~v~~~~~~~~~  270 (490)
                      +-+......         |..  .+.++..+++++ ++++.+....|..|.+... +.+..  .......-.+..|+...
T Consensus       146 ~~~s~~~~~---------h~~~~~~ns~~~snd~~-~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~  215 (344)
T KOG4532|consen  146 SGDSNKFAV---------HNQNLTQNSLHYSNDPS-WGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSEND  215 (344)
T ss_pred             ecCccccee---------eccccceeeeEEcCCCc-eEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCc
Confidence            654332211         333  378999999996 8888888899999988743 22222  22334445688999999


Q ss_pred             CEEEEEeCCCeEEEEeCCCCceee-----eeeecCCCceeEEEEeCCCc--EEEEEeCCCceeEEEEecCCCCCCCeEEE
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIEE-----EAVCHEGSKATRAIYLKSGL--IFTTGFSKMSERQYSLRAPDHLDEPIVMV  343 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~~s~~~~--~l~~~~~~~~~~~i~iwd~~~~~~~~~~~  343 (490)
                      ..+|+++.||++.|||+|......     +...|.+. +..+.|++-|.  +|...-   .-+.+.+-|+++......+.
T Consensus       216 ~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa-~R~c~Fsl~g~lDLLf~sE---hfs~~hv~D~R~~~~~q~I~  291 (344)
T KOG4532|consen  216 LQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGA-FRVCRFSLYGLLDLLFISE---HFSRVHVVDTRNYVNHQVIV  291 (344)
T ss_pred             ceEEEEecCCcEEEEEecccccchhhhcccCCCCCCc-eEEEEecCCCcceEEEEec---CcceEEEEEcccCceeeEEe
Confidence            999999999999999999754322     22245554 99999997653  333322   36788999999876544433


Q ss_pred             ecc-----C-CCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        344 ELD-----T-SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       344 ~~~-----~-~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      ..+     | ...|....|+.++.-+++ .+. -.+.-|++...
T Consensus       292 i~~d~~~~~~tq~ifgt~f~~~n~s~~v-~~e-~~~ae~ni~sr  333 (344)
T KOG4532|consen  292 IPDDVERKHNTQHIFGTNFNNENESNDV-KNE-LQGAEYNILSR  333 (344)
T ss_pred             cCccccccccccccccccccCCCccccc-ccc-hhhheeecccc
Confidence            221     1 133677778777777643 222 23444555443

>KOG1645|consensus

Probab=98.96  E-value=7.5e-08  Score=86.34  Aligned_cols=250  Identities=10%  Similarity=0.064  Sum_probs=145.5

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      ...+.+|...|.+++|+|..+-++..++.+.+|+|.|+++...+..+.       .+ ..+++++|.-+..++++.|...
T Consensus       186 sq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~-------a~-~~~wSC~wDlde~h~IYaGl~n  257 (463)
T KOG1645|consen  186 SQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYI-------AY-NQIWSCCWDLDERHVIYAGLQN  257 (463)
T ss_pred             hhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeehee-------cc-CCceeeeeccCCcceeEEeccC
Confidence            446678999999999999885588999999999999999887766543       24 7899999999998999999999


Q ss_pred             CcEEEEECCCCe-eEEEEec--CCCcEEEEEEc------CCCCEEEEEeCCCeEEEEeCCC--CceeeeeeecCCCceeE
Q psy17682        238 NNVAIWNVGTGE-IMIQIEC--HPDIVYSASWN------WDGSKLLTTCKDKKMRIINPRT--GAIEEEAVCHEGSKATR  306 (490)
Q Consensus       238 g~v~iwd~~~~~-~~~~~~~--~~~~v~~~~~~------~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~  306 (490)
                      |.|.|||++..+ ++..+.+  ...+|..++.-      +.+.+++..+.+  +..|.+..  +.....+.........+
T Consensus       258 G~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele~pG~cis  335 (463)
T KOG1645|consen  258 GMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELEPPGICIS  335 (463)
T ss_pred             ceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccCCCcceee
Confidence            999999998654 2222322  23344444432      233444444432  34454432  22222222121223455


Q ss_pred             EEEeCCCcEEEEEe-CCCc---eeEEEE-ecCCCCCCCeEEEeccC-C------CceeeeeecCCCCeEEEEecCCCeEE
Q psy17682        307 AIYLKSGLIFTTGF-SKMS---ERQYSL-RAPDHLDEPIVMVELDT-S------NGVMFPLYDPDTNLVYLCGKGDSVIR  374 (490)
Q Consensus       307 ~~~s~~~~~l~~~~-~~~~---~~~i~i-wd~~~~~~~~~~~~~~~-~------~~i~~~~~s~~~~~l~~~g~~dg~i~  374 (490)
                      +.+.+..+.++... .+..   .+.+-. -|...+. +.......+ .      ..-..+.-.++.++++..|...+.+.
T Consensus       336 mqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~-pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn~li  414 (463)
T KOG1645|consen  336 MQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGF-PVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDSTNELI  414 (463)
T ss_pred             eeecCccceEEEEecCCCCCccceeeeeeeccccCc-eeeeecccccCCcccccccccceeccccccEEEEecCCcceeE
Confidence            55555433333322 1100   011111 0111111 111111111 0      00112223567788888888889999


Q ss_pred             EEEecCCCCeeEEeeeeeCCCceeeEEEeeC--ceeEE-eecceeEEEEec
Q psy17682        375 YFEITAEPPFVHYINTFQTPDPQRGIGMMPK--RGCDV-NSCEIGRFFRLN  422 (490)
Q Consensus       375 iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~--~~~l~-~~~~~~~~~~~~  422 (490)
                      +||..+.+    .+..+....+|.+++...-  +.+|+ -.+..+++|+.+
T Consensus       415 l~D~~s~e----vvQ~l~~~epv~Dicp~~~n~~syLa~LTd~~v~Iyk~e  461 (463)
T KOG1645|consen  415 LQDPHSFE----VVQTLALSEPVLDICPNDTNGSSYLALLTDDRVHIYKNE  461 (463)
T ss_pred             Eeccchhh----eeeecccCcceeecceeecCCcchhhheecceEEEEecC
Confidence            99999987    5555666678887766542  23444 345677787754

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.95  E-value=2.1e-07  Score=80.33  Aligned_cols=217  Identities=10%  Similarity=0.042  Sum_probs=117.8

Q ss_pred             eeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccc-cc
Q psy17682         46 RVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDY-VK  124 (490)
Q Consensus        46 ~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~  124 (490)
                      .=.-++|||++ .+||-+...|+|+++|+...+.-.....                 ..........|..+.|-+-. ..
T Consensus        45 QWRkl~WSpD~-tlLa~a~S~G~i~vfdl~g~~lf~I~p~-----------------~~~~~d~~~Aiagl~Fl~~~~s~  106 (282)
T PF15492_consen   45 QWRKLAWSPDC-TLLAYAESTGTIRVFDLMGSELFVIPPA-----------------MSFPGDLSDAIAGLIFLEYKKSA  106 (282)
T ss_pred             hheEEEECCCC-cEEEEEcCCCeEEEEecccceeEEcCcc-----------------cccCCccccceeeeEeecccccc
Confidence            34678999999 8999999999999999986542110000                 00000112233334332221 12


Q ss_pred             ceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccc
Q psy17682        125 EFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL  204 (490)
Q Consensus       125 ~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  204 (490)
                      +....+......|.++-|-+.....+..+..........+...|.++.++|.. ++|+.||....      +++. .   
T Consensus       107 ~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h-~LLlVgG~~~~------~~~~-s---  175 (282)
T PF15492_consen  107 QWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKH-RLLLVGGCEQN------QDGM-S---  175 (282)
T ss_pred             ccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCC-CEEEEeccCCC------CCcc-c---
Confidence            33445666667777776665311111111111122223457899999999976 66666654322      1100 0   


Q ss_pred             ccceeeecccccCEEEEEEeeCCCCEE-EEEeCCCc------EEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe
Q psy17682        205 TEPVVDLLYHQRRVGLVLWHPTAQNVL-LTAGSDNN------VAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC  277 (490)
Q Consensus       205 ~~~~~~~~~~~~~v~~~~~~p~~~~~l-~s~~~dg~------v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  277 (490)
                             .+....+++-..-.+.+.+. ++...|+.      -.+|.+-+.+...........|..|..+|||+.|++..
T Consensus       176 -------~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih  248 (282)
T PF15492_consen  176 -------KASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIH  248 (282)
T ss_pred             -------cccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEE
Confidence                   01222333333333322222 22222221      23444433322222223567899999999999999999


Q ss_pred             CCCeEEEEeCCCCceeeeeee
Q psy17682        278 KDKKMRIINPRTGAIEEEAVC  298 (490)
Q Consensus       278 ~dg~i~iwd~~~~~~~~~~~~  298 (490)
                      .+|.|.+|++.+-++......
T Consensus       249 ~sG~lsLW~iPsL~~~~~W~~  269 (282)
T PF15492_consen  249 FSGSLSLWEIPSLRLQRSWKQ  269 (282)
T ss_pred             cCCeEEEEecCcchhhcccch
Confidence            999999999998777666653

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.95  E-value=2.3e-06  Score=76.35  Aligned_cols=240  Identities=13%  Similarity=0.127  Sum_probs=161.1

Q ss_pred             eEEEECCCCCCEEEEEeCCCc-EEEEECCCCCcccccccc-eeeecccccCEEEEEEeeCCCCEEEEEeC-----CCcEE
Q psy17682        169 LDIAWSPHDDNVIASGSEDCV-VKVWQIPDGGISRTLTEP-VVDLLYHQRRVGLVLWHPTAQNVLLTAGS-----DNNVA  241 (490)
Q Consensus       169 ~~~~~~p~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-----dg~v~  241 (490)
                      ..++.+|.....++.+-.-|+ ..+||..+++....+..+ ...+.+|      -.|+++|+ +|++.-.     .|.|-
T Consensus         8 H~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGH------g~fs~dG~-~LytTEnd~~~g~G~Ig   80 (305)
T PF07433_consen    8 HGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGH------GVFSPDGR-LLYTTENDYETGRGVIG   80 (305)
T ss_pred             cceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecC------EEEcCCCC-EEEEeccccCCCcEEEE
Confidence            357888866577777776664 678999999877665432 2344555      57999997 6666543     47899


Q ss_pred             EEECC-CCeeEEEEecCCCcEEEEEEcCCCCEEEEEe------------------CCCeEEEEeCCCCceeeeee----e
Q psy17682        242 IWNVG-TGEIMIQIECHPDIVYSASWNWDGSKLLTTC------------------KDKKMRIINPRTGAIEEEAV----C  298 (490)
Q Consensus       242 iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------------------~dg~i~iwd~~~~~~~~~~~----~  298 (490)
                      |||.. +.+.+.++..|.-.-..+.+.|||+.|+++.                  .+-++.+.|..+++.+....    .
T Consensus        81 Vyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~  160 (305)
T PF07433_consen   81 VYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDL  160 (305)
T ss_pred             EEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccc
Confidence            99998 6678888887777778899999998777764                  13356677888888776643    2


Q ss_pred             cCCCceeEEEEeCCCcEEEEEeCCCc----eeEEEEecCCCCCCCeEEEe-----ccCCCceeeeeecCCCCeEEEEecC
Q psy17682        299 HEGSKATRAIYLKSGLIFTTGFSKMS----ERQYSLRAPDHLDEPIVMVE-----LDTSNGVMFPLYDPDTNLVYLCGKG  369 (490)
Q Consensus       299 ~~~~~~~~~~~s~~~~~l~~~~~~~~----~~~i~iwd~~~~~~~~~~~~-----~~~~~~i~~~~~s~~~~~l~~~g~~  369 (490)
                      |..+ +..+++.++|..+...-..+.    --.+.+++....  ...+..     ..-...+-++++++++..+++|+-.
T Consensus       161 ~~lS-iRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~--~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPr  237 (305)
T PF07433_consen  161 HQLS-IRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGA--LRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPR  237 (305)
T ss_pred             cccc-eeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCc--ceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCC
Confidence            4443 999999999987776542221    123444443331  111111     1123458899999999999888888


Q ss_pred             CCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecCCC
Q psy17682        370 DSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSG  425 (490)
Q Consensus       370 dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~~  425 (490)
                      .+.+.+||..+++    .+..... ..+.+++-.+++ ++++ ++...++.+....
T Consensus       238 Gg~~~~~d~~tg~----~~~~~~l-~D~cGva~~~~~-f~~s-sG~G~~~~~~~~~  286 (305)
T PF07433_consen  238 GGRVAVWDAATGR----LLGSVPL-PDACGVAPTDDG-FLVS-SGQGQLIRLSPDG  286 (305)
T ss_pred             CCEEEEEECCCCC----Eeecccc-CceeeeeecCCc-eEEe-CCCccEEEccCcc
Confidence            8999999999997    3332221 246777777777 4333 4444566655544

>KOG1912|consensus

Probab=98.93  E-value=3.5e-07  Score=88.74  Aligned_cols=340  Identities=11%  Similarity=0.076  Sum_probs=194.4

Q ss_pred             CCCcEEecccccceeeeEEeccCC-----------CceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecc
Q psy17682         33 LTEPVVDLLYHQRRVGLVLWHPTA-----------QNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKV  101 (490)
Q Consensus        33 ~~~~~~~l~gH~~~V~~v~~~p~~-----------~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (490)
                      ..+.+..+.-|+..|+.|.|.|..           .-+||++...|.|.+||...+....                  .+
T Consensus        44 s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~------------------~l  105 (1062)
T KOG1912|consen   44 SLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVIN------------------WL  105 (1062)
T ss_pred             hhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhh------------------hh
Confidence            345667788899999999998743           2467777788999999988754211                  11


Q ss_pred             cCCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEE
Q psy17682        102 GGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVI  181 (490)
Q Consensus       102 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l  181 (490)
                      .+     ....+..++|-+.. +....++++-.+...+.+|+..    ..+++++    ...-.....|+.+.|-+.+.+
T Consensus       106 ~~-----~~~~~qdl~W~~~r-d~Srd~LlaIh~ss~lvLwntd----tG~k~Wk----~~ys~~iLs~f~~DPfd~rh~  171 (1062)
T KOG1912|consen  106 SH-----SNDSVQDLCWVPAR-DDSRDVLLAIHGSSTLVLWNTD----TGEKFWK----YDYSHEILSCFRVDPFDSRHF  171 (1062)
T ss_pred             cC-----CCcchhheeeeecc-CcchheeEEecCCcEEEEEEcc----CCceeec----cccCCcceeeeeeCCCCcceE
Confidence            11     12245666665442 2223466677788899999875    3333322    122234667799998776667


Q ss_pred             EEEeCCCcEEEEECCCCCcc----cc--cccceeee----------ccccc---------CEEEEEEeeCCCCEEEEEeC
Q psy17682        182 ASGSEDCVVKVWQIPDGGIS----RT--LTEPVVDL----------LYHQR---------RVGLVLWHPTAQNVLLTAGS  236 (490)
Q Consensus       182 ~s~~~dg~i~iwd~~~~~~~----~~--~~~~~~~~----------~~~~~---------~v~~~~~~p~~~~~l~s~~~  236 (490)
                      ..-+..|.+.+-+.-.....    +.  +..+...+          ..+..         ....++|+|.-+|.++.. .
T Consensus       172 ~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~-~  250 (1062)
T KOG1912|consen  172 CVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFIT-F  250 (1062)
T ss_pred             EEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEE-e
Confidence            66666777776664311110    00  00000000          00000         022356788876665554 5


Q ss_pred             CCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC--CEEEEEeCCCeEEEEeCCCCc----------------eeeeeee
Q psy17682        237 DNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG--SKLLTTCKDKKMRIINPRTGA----------------IEEEAVC  298 (490)
Q Consensus       237 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~----------------~~~~~~~  298 (490)
                      ...+.++|++-..++....-..+.+.-+.+-|++  ..|++...||.+.+|--+...                ....+..
T Consensus       251 prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~vr~  330 (1062)
T KOG1912|consen  251 PRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQVHVVRP  330 (1062)
T ss_pred             ccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchhhccccccceEEEee
Confidence            6789999999888888777667777788888876  478889999999999755421                1111111


Q ss_pred             cCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEE-----------------------------eccCC
Q psy17682        299 HEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMV-----------------------------ELDTS  348 (490)
Q Consensus       299 ~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~-----------------------------~~~~~  348 (490)
                      -....+......|. ...++.-.   .++.+.+|.+++++......                             .-.|.
T Consensus       331 m~~~rp~~~~~cPs~~sa~avl~---s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg~h~  407 (1062)
T KOG1912|consen  331 MEEFRPVIGASCPSTPSALAVLY---SSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISLSDDGSHS  407 (1062)
T ss_pred             chhcccceeecCCCChhhhhhhh---hcchhHHHhhhcCCcCcccccccccccccccccCceeehhhccccchhhcCCCC
Confidence            11111222233333 22222222   35667777776433211000                             00122


Q ss_pred             Cceeeeee-----------cCCCC------eEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCceeEE
Q psy17682        349 NGVMFPLY-----------DPDTN------LVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGCDV  410 (490)
Q Consensus       349 ~~i~~~~~-----------s~~~~------~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~  410 (490)
                      .+.++...           .|.|+      .|++.|...|+|.++|+.++.    ....+. |...|.++.|.....++-
T Consensus       408 sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst~~----v~~~fsvht~~VkgleW~g~sslvS  483 (1062)
T KOG1912|consen  408 SGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVSTNA----VAASFSVHTSLVKGLEWLGNSSLVS  483 (1062)
T ss_pred             CCceeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecchh----hhhhhcccccceeeeeeccceeEEE
Confidence            33332222           22222      366889999999999999986    222222 456788888887766544


Q ss_pred             ee
Q psy17682        411 NS  412 (490)
Q Consensus       411 ~~  412 (490)
                      .+
T Consensus       484 fs  485 (1062)
T KOG1912|consen  484 FS  485 (1062)
T ss_pred             ee
Confidence            43

>KOG1409|consensus

Probab=98.90  E-value=2.3e-07  Score=81.59  Aligned_cols=250  Identities=14%  Similarity=0.121  Sum_probs=165.9

Q ss_pred             CcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC-CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe
Q psy17682        157 DHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP-DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG  235 (490)
Q Consensus       157 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~  235 (490)
                      .++.++||.+.|+....-|.. .-+++.+.|.+++||--+ .++....+.      .....+++++.+.++.. .|+.|-
T Consensus        16 ll~~~eG~~d~vn~~~l~~~e-~gv~~~s~drtvrv~lkrds~q~wpsI~------~~mP~~~~~~~y~~e~~-~L~vg~   87 (404)
T KOG1409|consen   16 LLSKIEGSQDDVNAAILIPKE-EGVISVSEDRTVRVWLKRDSGQYWPSIY------HYMPSPCSAMEYVSESR-RLYVGQ   87 (404)
T ss_pred             hhhhhcCchhhhhhheeccCC-CCeEEccccceeeeEEeccccccCchhh------hhCCCCceEeeeeccce-EEEEEE
Confidence            456778999999998888855 789999999999999744 333333322      12456789999999874 889998


Q ss_pred             CCCcEEEEECC----CCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeC
Q psy17682        236 SDNNVAIWNVG----TGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLK  311 (490)
Q Consensus       236 ~dg~v~iwd~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~  311 (490)
                      ..|++.-+.+.    ....++....|...+..+-|+.....+++.+.|..+.---.+.+..+..+.-...  .+.+.+.-
T Consensus        88 ~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~--~t~~~~d~  165 (404)
T KOG1409|consen   88 DNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETP--ASALQFDA  165 (404)
T ss_pred             ecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeecc--CCCCceee
Confidence            99999888654    3344555667999999999998889999999887766444444443332221110  11111111


Q ss_pred             CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee
Q psy17682        312 SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF  391 (490)
Q Consensus       312 ~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~  391 (490)
                      .  +...|.   ..+.+.+-.+............+|...+.+++|.|..+.| .+|..|..+.+||+...+-.  ....+
T Consensus       166 ~--~~fvGd---~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~L-fSg~~d~~vi~wdigg~~g~--~~el~  237 (404)
T KOG1409|consen  166 L--YAFVGD---HSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLL-FSGASDHSVIMWDIGGRKGT--AYELQ  237 (404)
T ss_pred             E--EEEecc---cccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEE-EeccccCceEEEeccCCcce--eeeec
Confidence            1  223333   3445554444444444445555788889999999988888 78999999999999876533  23334


Q ss_pred             eCCCceeeEEEeeCceeEEeec--ceeEEEEecCC
Q psy17682        392 QTPDPQRGIGMMPKRGCDVNSC--EIGRFFRLNNS  424 (490)
Q Consensus       392 ~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~~~  424 (490)
                      .+.+.|..+...+--+.+.+.+  +.+-+|+....
T Consensus       238 gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~  272 (404)
T KOG1409|consen  238 GHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVK  272 (404)
T ss_pred             cchhhhhhhhhhhhheeeeeccCCCeEEEEeccce
Confidence            4555677776666555555543  35567776543

>KOG1832|consensus

Probab=98.88  E-value=1.3e-09  Score=106.48  Aligned_cols=218  Identities=13%  Similarity=0.123  Sum_probs=150.8

Q ss_pred             CcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC
Q psy17682        157 DHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS  236 (490)
Q Consensus       157 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~  236 (490)
                      ..+++..|...-+|++|+-.. ++|+.|+..|.|+++++.+|.......       +|...|+.+.-+.+|+.+|.+++.
T Consensus      1093 ~w~~frd~~~~fTc~afs~~~-~hL~vG~~~Geik~~nv~sG~~e~s~n-------cH~SavT~vePs~dgs~~Ltsss~ 1164 (1516)
T KOG1832|consen 1093 SWRSFRDETALFTCIAFSGGT-NHLAVGSHAGEIKIFNVSSGSMEESVN-------CHQSAVTLVEPSVDGSTQLTSSSS 1164 (1516)
T ss_pred             cchhhhccccceeeEEeecCC-ceEEeeeccceEEEEEccCcccccccc-------ccccccccccccCCcceeeeeccc
Confidence            455778899999999999865 899999999999999999998766544       499999999999999855555555


Q ss_pred             CC-cEEEEECCC-CeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeee---cCCCceeEEEEeC
Q psy17682        237 DN-NVAIWNVGT-GEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVC---HEGSKATRAIYLK  311 (490)
Q Consensus       237 dg-~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~s~  311 (490)
                      .. ...+|++.+ +.+.+++.+    -.++.|+..-..-+.|+......+||+.++.++.++..   .....-..+.|+|
T Consensus      1165 S~PlsaLW~~~s~~~~~Hsf~e----d~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP 1240 (1516)
T KOG1832|consen 1165 SSPLSALWDASSTGGPRHSFDE----DKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSP 1240 (1516)
T ss_pred             cCchHHHhccccccCccccccc----cceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCC
Confidence            44 577999864 445555542    45788887655556666667899999999988777431   1122246778999


Q ss_pred             CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee
Q psy17682        312 SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF  391 (490)
Q Consensus       312 ~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~  391 (490)
                      +..++.      .||  .+||.+..+....+   +.-..-..-.|+|.|..++ ..+     .|||+++-+ +.+.+..+
T Consensus      1241 ~D~LIl------ndG--vLWDvR~~~aIh~F---D~ft~~~~G~FHP~g~eVI-INS-----EIwD~RTF~-lLh~VP~L 1302 (1516)
T KOG1832|consen 1241 CDTLIL------NDG--VLWDVRIPEAIHRF---DQFTDYGGGGFHPSGNEVI-INS-----EIWDMRTFK-LLHSVPSL 1302 (1516)
T ss_pred             CcceEe------eCc--eeeeeccHHHHhhh---hhheecccccccCCCceEE-eec-----hhhhhHHHH-HHhcCccc
Confidence            988876      344  37999876433222   2222223346899999984 332     589999875 22222212


Q ss_pred             eCCCceeeEEEeeCcee
Q psy17682        392 QTPDPQRGIGMMPKRGC  408 (490)
Q Consensus       392 ~~~~~i~~~~~sp~~~~  408 (490)
                          .-..+.|+..|..
T Consensus      1303 ----dqc~VtFNstG~V 1315 (1516)
T KOG1832|consen 1303 ----DQCAVTFNSTGDV 1315 (1516)
T ss_pred             ----cceEEEeccCccc
Confidence                2355666666644

>KOG3914|consensus

Probab=98.86  E-value=6.8e-08  Score=86.66  Aligned_cols=109  Identities=21%  Similarity=0.359  Sum_probs=85.2

Q ss_pred             EEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccce
Q psy17682        129 EIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPV  208 (490)
Q Consensus       129 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  208 (490)
                      +....+....+.+|...    +     .....+-||-..++.++|+||+ .+++++..|..|++-....-..+..+    
T Consensus       124 v~dkagD~~~~di~s~~----~-----~~~~~~lGhvSml~dVavS~D~-~~IitaDRDEkIRvs~ypa~f~Iesf----  189 (390)
T KOG3914|consen  124 VADKAGDVYSFDILSAD----S-----GRCEPILGHVSMLLDVAVSPDD-QFIITADRDEKIRVSRYPATFVIESF----  189 (390)
T ss_pred             EEeecCCceeeeeeccc----c-----cCcchhhhhhhhhheeeecCCC-CEEEEecCCceEEEEecCcccchhhh----
Confidence            33444555566666654    1     1223456999999999999998 89999999999999888766555554    


Q ss_pred             eeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe
Q psy17682        209 VDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE  255 (490)
Q Consensus       209 ~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~  255 (490)
                        ..||..-|..++.-++.  .|++||.|++|++||+.+|+.+.++.
T Consensus       190 --clGH~eFVS~isl~~~~--~LlS~sGD~tlr~Wd~~sgk~L~t~d  232 (390)
T KOG3914|consen  190 --CLGHKEFVSTISLTDNY--LLLSGSGDKTLRLWDITSGKLLDTCD  232 (390)
T ss_pred             --ccccHhheeeeeeccCc--eeeecCCCCcEEEEecccCCcccccc
Confidence              34799999999998875  68999999999999999999886664

>KOG0309|consensus

Probab=98.86  E-value=1.4e-08  Score=97.51  Aligned_cols=219  Identities=16%  Similarity=0.137  Sum_probs=146.9

Q ss_pred             CCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccc
Q psy17682         31 RTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRN  110 (490)
Q Consensus        31 ~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (490)
                      .+.......|.||...|+.+-|+|..+.+|++|+.|-.+-.||++....+..              ...        ...
T Consensus       101 ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~y--------------s~~--------~w~  158 (1081)
T KOG0309|consen  101 SSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFY--------------STS--------SWR  158 (1081)
T ss_pred             CCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCccee--------------eee--------ccc
Confidence            4556667789999999999999999999999999999999999987542220              000        011


Q ss_pred             ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcE
Q psy17682        111 STANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVV  190 (490)
Q Consensus       111 ~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i  190 (490)
                      .....++|+-..     ..+.+......+.+|++.    ..+.   ....+++|...|+.++|+.--...+.+++.||+|
T Consensus       159 s~asqVkwnyk~-----p~vlasshg~~i~vwd~r----~gs~---pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tv  226 (1081)
T KOG0309|consen  159 SAASQVKWNYKD-----PNVLASSHGNDIFVWDLR----KGST---PLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTV  226 (1081)
T ss_pred             ccCceeeecccC-----cchhhhccCCceEEEecc----CCCc---ceEEecccceeeehHHHhhhhhhhhcccCCCCce
Confidence            123445554221     124445667789999885    3322   4567788999999999987655689999999999


Q ss_pred             EEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe-CCCcEEEEE---------CCC-CeeEEEEecCCC
Q psy17682        191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG-SDNNVAIWN---------VGT-GEIMIQIECHPD  259 (490)
Q Consensus       191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~dg~v~iwd---------~~~-~~~~~~~~~~~~  259 (490)
                      +.||..........      ......+|.--.+.|-|+-+.+--. .+..+.+++         ..+ .+++..|.+|..
T Consensus       227 kfw~y~kSt~e~~~------~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D  300 (1081)
T KOG0309|consen  227 KFWDYSKSTTESKR------TVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDD  300 (1081)
T ss_pred             eeecccccccccce------eccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcch
Confidence            99998654332211      1114456666667776542221111 112333333         222 358899999999


Q ss_pred             cEEEEEEcCCC----------CEEEEEeCCCeEEEEeCCC
Q psy17682        260 IVYSASWNWDG----------SKLLTTCKDKKMRIINPRT  289 (490)
Q Consensus       260 ~v~~~~~~~~~----------~~l~~~~~dg~i~iwd~~~  289 (490)
                      .|....|-..+          -.|++-+.|.++++|-+.+
T Consensus       301 ~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~  340 (1081)
T KOG0309|consen  301 VVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS  340 (1081)
T ss_pred             HHHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence            98877775422          2799999999999998753

>KOG4714|consensus

Probab=98.86  E-value=2.8e-08  Score=83.91  Aligned_cols=176  Identities=15%  Similarity=0.188  Sum_probs=108.7

Q ss_pred             CCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccc
Q psy17682         31 RTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRN  110 (490)
Q Consensus        31 ~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (490)
                      .....+..++..|++.-.+-..+-.+ +.+++++.||.+.+.+.+.-....                 .++......+..
T Consensus        76 t~~i~~~~~~a~~sep~p~~~~s~~~-t~V~~~~~dg~~~v~s~~~~~~~~-----------------~~i~~~~~~~as  137 (319)
T KOG4714|consen   76 DDGIDPFKVLAKNSEIDPNDACTMTD-NRVCIGYADGSLAVFSTDKDLALM-----------------SRIPSIHSGSAS  137 (319)
T ss_pred             ccCcCceeeeeccCCCCCcccccccC-CceEecCCCceEEEEechHHHhhh-----------------hhcccccccccc
Confidence            34455666666777666665555555 678999999999999876521000                 000000000000


Q ss_pred             ----ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeC
Q psy17682        111 ----STANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSE  186 (490)
Q Consensus       111 ----~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~  186 (490)
                          +..+.+ .++.        +.....-+..++|++.    ..+.+......    -..|.+++-+|...+++++|+.
T Consensus       138 ~~~~~~~~~i-~s~~--------~g~~n~~d~~~a~~~~----p~~t~~~~~~~----~~~v~~l~~hp~qq~~v~cgt~  200 (319)
T KOG4714|consen  138 RKICRHGNSI-LSGG--------CGNWNAQDNFYANTLD----PIKTLIPSKKA----LDAVTALCSHPAQQHLVCCGTD  200 (319)
T ss_pred             cceeecccEE-ecCC--------cceEeeccceeeeccc----ccccccccccc----cccchhhhCCcccccEEEEecC
Confidence                000000 0110        1111223445556554    22222211222    2349999999987789999999


Q ss_pred             CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC
Q psy17682        187 DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT  247 (490)
Q Consensus       187 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~  247 (490)
                      ||.+-+||.++..      .|...+..|+..++-+-|+|..+..|+++++||.+..||..+
T Consensus       201 dg~~~l~d~rn~~------~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  201 DGIVGLWDARNVA------MPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             CCeEEEEEccccc------chHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence            9999999997763      344457789999999999999777899999999999999763

>KOG4714|consensus

Probab=98.82  E-value=6.9e-08  Score=81.60  Aligned_cols=147  Identities=14%  Similarity=0.146  Sum_probs=95.8

Q ss_pred             EEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe-----CCCcEEEEECCCCCccc
Q psy17682        128 EEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS-----EDCVVKVWQIPDGGISR  202 (490)
Q Consensus       128 ~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~-----~dg~i~iwd~~~~~~~~  202 (490)
                      .-++.+..+|.+.++...    ...+....+.  .-|.+.......+ .+ +.+.++.     .-+..++|+++..+...
T Consensus       102 t~V~~~~~dg~~~v~s~~----~~~~~~~~i~--~~~~~~as~~~~~-~~-~~i~s~~~g~~n~~d~~~a~~~~p~~t~~  173 (319)
T KOG4714|consen  102 NRVCIGYADGSLAVFSTD----KDLALMSRIP--SIHSGSASRKICR-HG-NSILSGGCGNWNAQDNFYANTLDPIKTLI  173 (319)
T ss_pred             CceEecCCCceEEEEech----HHHhhhhhcc--cccccccccceee-cc-cEEecCCcceEeeccceeeeccccccccc
Confidence            356778889999998775    2111111111  1233322222222 23 4444432     12345566654433322


Q ss_pred             ccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe-eEEEEecCCCcEEEEEEcC-CCCEEEEEeCCC
Q psy17682        203 TLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE-IMIQIECHPDIVYSASWNW-DGSKLLTTCKDK  280 (490)
Q Consensus       203 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg  280 (490)
                      ...   .    ....|.+++-+|..++++++|+.||.+-+||.++.. +...+..|+.+++.+.|+| ++..|+++++||
T Consensus       174 ~~~---~----~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedG  246 (319)
T KOG4714|consen  174 PSK---K----ALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDG  246 (319)
T ss_pred             ccc---c----ccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCC
Confidence            111   1    223499999999988899999999999999999875 3445678999999999999 678999999999


Q ss_pred             eEEEEeCCC
Q psy17682        281 KMRIINPRT  289 (490)
Q Consensus       281 ~i~iwd~~~  289 (490)
                      .+.-||..+
T Consensus       247 slw~wdas~  255 (319)
T KOG4714|consen  247 SLWHWDAST  255 (319)
T ss_pred             cEEEEcCCC
Confidence            999999875

>KOG1912|consensus

Probab=98.82  E-value=7.3e-07  Score=86.60  Aligned_cols=239  Identities=15%  Similarity=0.152  Sum_probs=158.8

Q ss_pred             CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCC-----------CCEE
Q psy17682        113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHD-----------DNVI  181 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~-----------~~~l  181 (490)
                      ..++.|+|.+      .++. +....+.+.+.-        ..+.++.+..|...|+.+.|.|..           .-++
T Consensus        18 ~~A~Dw~~~G------LiAy-gshslV~VVDs~--------s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lli   82 (1062)
T KOG1912|consen   18 RNAADWSPSG------LIAY-GSHSLVSVVDSR--------SLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLI   82 (1062)
T ss_pred             ccccccCccc------eEEE-ecCceEEEEehh--------hhhhhhccccCccceeEEEeccCCCchhccCccccceeE
Confidence            5677888875      3433 444556666542        344677888999999999998731           2367


Q ss_pred             EEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC---CCCEEEEEeCCCcEEEEECCCCeeEEEEecCC
Q psy17682        182 ASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT---AQNVLLTAGSDNNVAIWNVGTGEIMIQIECHP  258 (490)
Q Consensus       182 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~  258 (490)
                      |++.-.|.|.+||...+..+..+..       |..++..++|-+.   .+.+|++-....++.+|+..+|+.........
T Consensus        83 AsaD~~GrIil~d~~~~s~~~~l~~-------~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~  155 (1062)
T KOG1912|consen   83 ASADISGRIILVDFVLASVINWLSH-------SNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSH  155 (1062)
T ss_pred             EeccccCcEEEEEehhhhhhhhhcC-------CCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCC
Confidence            8888889999999988776655443       7888899999764   32467777777899999999999998888666


Q ss_pred             CcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCC-------CceeeeeeecCC----------------Cc--------eeE
Q psy17682        259 DIVYSASWNW-DGSKLLTTCKDKKMRIINPRT-------GAIEEEAVCHEG----------------SK--------ATR  306 (490)
Q Consensus       259 ~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~----------------~~--------~~~  306 (490)
                      ....|+.+.| |.+.+..-+..|.+.+-+.-.       ++..+....|..                .+        ...
T Consensus       156 ~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~  235 (1062)
T KOG1912|consen  156 EILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQ  235 (1062)
T ss_pred             cceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHh
Confidence            6777899999 777777777778877776532       112221112111                00        123


Q ss_pred             EEEeCCCc-EEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCC--CCeEEEEecCCCeEEEEEecC
Q psy17682        307 AIYLKSGL-IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPD--TNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       307 ~~~s~~~~-~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      .+|+|.-+ .+...    -.+.+.++|++-..+...+. +. .+++.-+.+-|+  ...| .+.-.||.+.+|--+.
T Consensus       236 faf~p~~rn~lfi~----~prellv~dle~~~~l~vvp-ie-r~~akfv~vlP~~~rd~L-fclH~nG~ltirvrk~  305 (1062)
T KOG1912|consen  236 FAFSPHWRNILFIT----FPRELLVFDLEYECCLAVVP-IE-RGGAKFVDVLPDPRRDAL-FCLHSNGRLTIRVRKE  305 (1062)
T ss_pred             hhcChhhhceEEEE----eccceEEEcchhhceeEEEE-ec-cCCcceeEeccCCCcceE-EEEecCCeEEEEEeec
Confidence            45677633 33333    36789999998654433322 22 233334444454  4456 6888999999998765

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.80  E-value=1.1e-08  Score=62.40  Aligned_cols=38  Identities=16%  Similarity=0.302  Sum_probs=35.6

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEe
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILIS   73 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd   73 (490)
                      +++.++.+|.+.|++++|+|++ .+|+||+.|++|++||
T Consensus         2 ~~~~~~~~h~~~i~~i~~~~~~-~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    2 KCVRTFRGHSSSINSIAWSPDG-NFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEESSSSSEEEEEEETTS-SEEEEEETTSEEEEEE
T ss_pred             eEEEEEcCCCCcEEEEEEeccc-ccceeeCCCCEEEEEC
Confidence            3678899999999999999998 9999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.80  E-value=1.1e-05  Score=77.60  Aligned_cols=264  Identities=9%  Similarity=0.031  Sum_probs=147.0

Q ss_pred             ceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEEEeeCCCc
Q psy17682         58 NVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQ  137 (490)
Q Consensus        58 ~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g  137 (490)
                      ..++.++.++.+..+|..+|+..                +.......       .........       ..+..+..+|
T Consensus        66 ~~v~v~~~~g~v~a~d~~tG~~~----------------W~~~~~~~-------~~~~p~v~~-------~~v~v~~~~g  115 (377)
T TIGR03300        66 GKVYAADADGTVVALDAETGKRL----------------WRVDLDER-------LSGGVGADG-------GLVFVGTEKG  115 (377)
T ss_pred             CEEEEECCCCeEEEEEccCCcEe----------------eeecCCCC-------cccceEEcC-------CEEEEEcCCC
Confidence            56777888899999998887621                11111100       001111211       1345566788


Q ss_pred             eEEEECCCCCCCCcccCCCCcceeecccCCeeE-EEECCCCCCEEEEEeCCCcEEEEECCCCCccccccccee--eeccc
Q psy17682        138 ALSILPPPSTAPNTGRINADHALVGGHKGPVLD-IAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV--DLLYH  214 (490)
Q Consensus       138 ~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~-~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~  214 (490)
                      .+..++..     +++.......    .+.+.+ ...  .+ ..++.++.+|.+..||.++++.+........  .....
T Consensus       116 ~l~ald~~-----tG~~~W~~~~----~~~~~~~p~v--~~-~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~  183 (377)
T TIGR03300       116 EVIALDAE-----DGKELWRAKL----SSEVLSPPLV--AN-GLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGS  183 (377)
T ss_pred             EEEEEECC-----CCcEeeeecc----CceeecCCEE--EC-CEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCC
Confidence            88888873     3332111110    112221 111  13 4677778899999999999987665432110  00001


Q ss_pred             ccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCC----Cc---EEEEEEcC--CCCEEEEEeCCCeEEEE
Q psy17682        215 QRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHP----DI---VYSASWNW--DGSKLLTTCKDKKMRII  285 (490)
Q Consensus       215 ~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~----~~---v~~~~~~~--~~~~l~~~~~dg~i~iw  285 (490)
                      .    +.... ++  .++.+..++.+..+|+++|+.+.+.....    ..   ...+.-+|  .+..+++++.+|.++.|
T Consensus       184 ~----sp~~~-~~--~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~  256 (377)
T TIGR03300       184 A----SPVIA-DG--GVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAAL  256 (377)
T ss_pred             C----CCEEE-CC--EEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEE
Confidence            1    11111 22  57778888999999999998776543110    00   00111111  35678888889999999


Q ss_pred             eCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEE
Q psy17682        286 NPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYL  365 (490)
Q Consensus       286 d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  365 (490)
                      |..+++.+.......   ......  .+..+.+++   .++.+..+|..+++.......... .....+..  .+..+ +
T Consensus       257 d~~tG~~~W~~~~~~---~~~p~~--~~~~vyv~~---~~G~l~~~d~~tG~~~W~~~~~~~-~~~ssp~i--~g~~l-~  324 (377)
T TIGR03300       257 DLRSGRVLWKRDASS---YQGPAV--DDNRLYVTD---ADGVVVALDRRSGSELWKNDELKY-RQLTAPAV--VGGYL-V  324 (377)
T ss_pred             ECCCCcEEEeeccCC---ccCceE--eCCEEEEEC---CCCeEEEEECCCCcEEEccccccC-CccccCEE--ECCEE-E
Confidence            999998776654211   122222  234444454   588999999987753222211111 11222222  35666 5


Q ss_pred             EecCCCeEEEEEecCCC
Q psy17682        366 CGKGDSVIRYFEITAEP  382 (490)
Q Consensus       366 ~g~~dg~i~iwd~~~~~  382 (490)
                      +++.+|.|+++|..+++
T Consensus       325 ~~~~~G~l~~~d~~tG~  341 (377)
T TIGR03300       325 VGDFEGYLHWLSREDGS  341 (377)
T ss_pred             EEeCCCEEEEEECCCCC
Confidence            67899999999999987

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG3914|consensus

Probab=98.80  E-value=1.3e-07  Score=85.00  Aligned_cols=163  Identities=14%  Similarity=0.104  Sum_probs=105.4

Q ss_pred             eeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEE--EEEeCCCcEEEEEC
Q psy17682        168 VLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVL--LTAGSDNNVAIWNV  245 (490)
Q Consensus       168 V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l--~s~~~dg~v~iwd~  245 (490)
                      +..+..++.+ .++|.+..+....++++........+   .. ...-...-+.+.|..+....+  -.++....+.+|..
T Consensus        65 ~~~~~~s~~~-~llAv~~~~K~~~~f~~~~~~~~~kl---~~-~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~  139 (390)
T KOG3914|consen   65 PALVLTSDSG-RLVAVATSSKQRAVFDYRENPKGAKL---LD-VSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSA  139 (390)
T ss_pred             ccccccCCCc-eEEEEEeCCCceEEEEEecCCCccee---ee-EeecccCcceeeeeeccceEEEEeecCCceeeeeecc
Confidence            3344556655 78888877777767776544331110   00 011222334444544433222  22334455566665


Q ss_pred             CCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee-ecCCCceeEEEEeCCCcEEEEEeCCCc
Q psy17682        246 GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV-CHEGSKATRAIYLKSGLIFTTGFSKMS  324 (490)
Q Consensus       246 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~~~~~~~  324 (490)
                      ..+... .+-+|-..++.++|+||+++|+++..|..|++-....-..+..+. +|... +..++.-++.. |++|+   .
T Consensus       140 ~~~~~~-~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eF-VS~isl~~~~~-LlS~s---G  213 (390)
T KOG3914|consen  140 DSGRCE-PILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEF-VSTISLTDNYL-LLSGS---G  213 (390)
T ss_pred             cccCcc-hhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhh-eeeeeeccCce-eeecC---C
Confidence            554433 344799999999999999999999999999998877666666655 67775 88888876655 55665   5


Q ss_pred             eeEEEEecCCCCCCCeE
Q psy17682        325 ERQYSLRAPDHLDEPIV  341 (490)
Q Consensus       325 ~~~i~iwd~~~~~~~~~  341 (490)
                      |+++++||..+++++..
T Consensus       214 D~tlr~Wd~~sgk~L~t  230 (390)
T KOG3914|consen  214 DKTLRLWDITSGKLLDT  230 (390)
T ss_pred             CCcEEEEecccCCcccc
Confidence            99999999999887633

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.79  E-value=1.6e-05  Score=71.56  Aligned_cols=204  Identities=15%  Similarity=0.167  Sum_probs=126.8

Q ss_pred             EEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEc-CCCCEEEEEeCCCeEEEEeCCCCceeeeee
Q psy17682        219 GLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWN-WDGSKLLTTCKDKKMRIINPRTGAIEEEAV  297 (490)
Q Consensus       219 ~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  297 (490)
                      .++.|.+....++++--..+.|..|+..+++... +.. .. ...+++. +++. |+.+.. +.+.++|..+++......
T Consensus         3 Egp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~-~~-~~G~~~~~~~g~-l~v~~~-~~~~~~d~~~g~~~~~~~   77 (246)
T PF08450_consen    3 EGPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDL-PG-PNGMAFDRPDGR-LYVADS-GGIAVVDPDTGKVTVLAD   77 (246)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EES-SS-EEEEEEECTTSE-EEEEET-TCEEEEETTTTEEEEEEE
T ss_pred             cceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-Eec-CC-CceEEEEccCCE-EEEEEc-CceEEEecCCCcEEEEee
Confidence            3678998444477777678999999998876533 332 22 7778888 5654 555554 445666998886544443


Q ss_pred             ec----CCCceeEEEEeCCCcEEEEEeCCCc---e--eEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEec
Q psy17682        298 CH----EGSKATRAIYLKSGLIFTTGFSKMS---E--RQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK  368 (490)
Q Consensus       298 ~~----~~~~~~~~~~s~~~~~l~~~~~~~~---~--~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~  368 (490)
                      ..    .......+++.++|++.++......   .  +.+..++.. ++.....   ......+.++|+|+++.|+++-+
T Consensus        78 ~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~---~~~~~pNGi~~s~dg~~lyv~ds  153 (246)
T PF08450_consen   78 LPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVA---DGLGFPNGIAFSPDGKTLYVADS  153 (246)
T ss_dssp             EETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEE---EEESSEEEEEEETTSSEEEEEET
T ss_pred             ccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEe---cCcccccceEECCcchheeeccc
Confidence            21    3345788999999997777652211   1  667777777 3322221   22345688999999999988888


Q ss_pred             CCCeEEEEEecCCCC-ee--EEeeeeeCC-CceeeEEEeeCceeEEee--cceeEEEEecCCCceEEEEE
Q psy17682        369 GDSVIRYFEITAEPP-FV--HYINTFQTP-DPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSGLCQVVSM  432 (490)
Q Consensus       369 ~dg~i~iwd~~~~~~-~~--~~~~~~~~~-~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~~~~~i~~  432 (490)
                      ..+.|..|++..... +.  +.+..+... ....++++..+|.+.++.  .+.+.+++.. ++++..+.+
T Consensus       154 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~  222 (246)
T PF08450_consen  154 FNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIEL  222 (246)
T ss_dssp             TTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-
T ss_pred             ccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcC
Confidence            999999999986443 21  122222222 247889999999988875  4444555544 444554544

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.77  E-value=2.7e-07  Score=80.07  Aligned_cols=206  Identities=10%  Similarity=0.159  Sum_probs=141.1

Q ss_pred             cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe-----eEEEEecCC------------CcEEEEEEcCCC--CEEE
Q psy17682        214 HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE-----IMIQIECHP------------DIVYSASWNWDG--SKLL  274 (490)
Q Consensus       214 ~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~-----~~~~~~~~~------------~~v~~~~~~~~~--~~l~  274 (490)
                      ....|+++.|...|. ++++|...|.|.+|.-....     ....++.|.            ..|..+.|..++  ..++
T Consensus        25 ead~ItaVefd~tg~-YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFL  103 (460)
T COG5170          25 EADKITAVEFDETGL-YLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFL  103 (460)
T ss_pred             ccceeeEEEeccccc-eEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEE
Confidence            456799999999984 99999999999999765332     222344443            347788887644  4677


Q ss_pred             EEeCCCeEEEEeCCCCce-------------------ee--------eee----------------ecCCCceeEEEEeC
Q psy17682        275 TTCKDKKMRIINPRTGAI-------------------EE--------EAV----------------CHEGSKATRAIYLK  311 (490)
Q Consensus       275 ~~~~dg~i~iwd~~~~~~-------------------~~--------~~~----------------~~~~~~~~~~~~s~  311 (490)
                      ..+.|.+|++|.+.....                   +.        .+.                .|. ..+.++.+..
T Consensus       104 lstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~-yhiNSiS~Ns  182 (460)
T COG5170         104 LSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHP-YHINSISFNS  182 (460)
T ss_pred             EecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccce-eEeeeeeecC
Confidence            778899999998864310                   00        000                111 1356777888


Q ss_pred             CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCC------ceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe-
Q psy17682        312 SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSN------GVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF-  384 (490)
Q Consensus       312 ~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~------~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~-  384 (490)
                      |...+.++.    +-.|.+|++.-......+..+..+.      -|++..|+|....++.-.+..|.|++-|++..... 
T Consensus       183 D~et~lSaD----dLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcd  258 (460)
T COG5170         183 DKETLLSAD----DLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCD  258 (460)
T ss_pred             chheeeecc----ceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhcc
Confidence            888888774    7889999998777666666554432      37889999987766666778899999999843210 


Q ss_pred             ------eEEeeeee------CCCceeeEEEeeCceeEEeecc-eeEEEEecCCC
Q psy17682        385 ------VHYINTFQ------TPDPQRGIGMMPKRGCDVNSCE-IGRFFRLNNSG  425 (490)
Q Consensus       385 ------~~~~~~~~------~~~~i~~~~~sp~~~~l~~~~~-~~~~~~~~~~~  425 (490)
                            ...+....      ....|..+.|+++|+++++-+- .+++|++...+
T Consensus       259 n~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwDvnm~k  312 (460)
T COG5170         259 NSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWDVNMAK  312 (460)
T ss_pred             CchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEeccccc
Confidence                  00111111      1135788999999999888755 88999988765

>KOG1275|consensus

Probab=98.76  E-value=2e-07  Score=92.06  Aligned_cols=182  Identities=11%  Similarity=0.107  Sum_probs=135.2

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCC
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHP  258 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~  258 (490)
                      ..++-|+-...+..+|+++.+..+....       ..+.|.-+..  ++ ..+.+|...|+|.+-|.++.+.++++..|.
T Consensus       148 ~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v-------~a~~v~imR~--Nn-r~lf~G~t~G~V~LrD~~s~~~iht~~aHs  217 (1118)
T KOG1275|consen  148 STLIMGGLQEKLIHIDLNTEKETRTTNV-------SASGVTIMRY--NN-RNLFCGDTRGTVFLRDPNSFETIHTFDAHS  217 (1118)
T ss_pred             cceeecchhhheeeeecccceeeeeeec-------cCCceEEEEe--cC-cEEEeecccceEEeecCCcCceeeeeeccc
Confidence            5677777777888999988877654332       2334555544  34 488999999999999999999999999999


Q ss_pred             CcEEEEEEcCCCCEEEEEeC---------CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEE
Q psy17682        259 DIVYSASWNWDGSKLLTTCK---------DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQY  328 (490)
Q Consensus       259 ~~v~~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i  328 (490)
                      +.|.++...  |+.|++++.         |.-|++||+|..+.+.-+..+.+  ..-+.|.|. ...+++.+   ..|..
T Consensus       218 ~siSDfDv~--GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~--P~flrf~Psl~t~~~V~S---~sGq~  290 (1118)
T KOG1275|consen  218 GSISDFDVQ--GNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYG--PQFLRFHPSLTTRLAVTS---QSGQF  290 (1118)
T ss_pred             cceeeeecc--CCeEEEeecccccccccccchhhhhhhhhhhccCCcccccC--chhhhhcccccceEEEEe---cccce
Confidence            999888775  889999874         55689999998877766655554  355667777 44555555   57888


Q ss_pred             EEecCCCCCCC-eEEEec-cCCCceeeeeecCCCCeEEEEecCCCeEEEEEe
Q psy17682        329 SLRAPDHLDEP-IVMVEL-DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEI  378 (490)
Q Consensus       329 ~iwd~~~~~~~-~~~~~~-~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~  378 (490)
                      .+-|..+...+ ...... ...+.+..+.+|++++.| +.|..+|.|.+|.-
T Consensus       291 q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~al-afgd~~g~v~~wa~  341 (1118)
T KOG1275|consen  291 QFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDAL-AFGDHEGHVNLWAD  341 (1118)
T ss_pred             eeccccccCCCccceeEEccCCCcceeEEecCCCceE-EEecccCcEeeecC
Confidence            88885544444 222222 334459999999999999 78999999999983

>KOG2695|consensus

Probab=98.73  E-value=4.4e-08  Score=86.04  Aligned_cols=142  Identities=11%  Similarity=0.004  Sum_probs=108.5

Q ss_pred             EEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC-----eeEEEEec
Q psy17682        182 ASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG-----EIMIQIEC  256 (490)
Q Consensus       182 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~-----~~~~~~~~  256 (490)
                      ++.+.+..|-+-|++++....        +. ..+.|.++.|...+ +++..|+.+|.|..+|++.+     .+...+- 
T Consensus       228 fs~G~sqqv~L~nvetg~~qs--------f~-sksDVfAlQf~~s~-nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-  296 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQQS--------FQ-SKSDVFALQFAGSD-NLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-  296 (425)
T ss_pred             ecccccceeEEEEeecccccc--------cc-cchhHHHHHhcccC-CeeEecccCCcEEEEEeeecccCCCcceEEEE-
Confidence            556667789999998875422        21 56778999999877 59999999999999999854     4556665 


Q ss_pred             CCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCce---eeeeeecCCCce-eEEEEeCCCcEEEEEeCCCceeEEEEe
Q psy17682        257 HPDIVYSASWNW-DGSKLLTTCKDKKMRIINPRTGAI---EEEAVCHEGSKA-TRAIYLKSGLIFTTGFSKMSERQYSLR  331 (490)
Q Consensus       257 ~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~-~~~~~s~~~~~l~~~~~~~~~~~i~iw  331 (490)
                      |...|+++..-. ++++|++.+.+|+|++||+|.-++   +.++.+|.+... .-+...+....+++++   .|...+||
T Consensus       297 h~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~G---dDcytRiW  373 (425)
T KOG2695|consen  297 HDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVG---DDCYTRIW  373 (425)
T ss_pred             cCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEcc---CeeEEEEE
Confidence            899999998776 788999999999999999997776   788888866421 2222444444555555   58999999


Q ss_pred             cCCCCC
Q psy17682        332 APDHLD  337 (490)
Q Consensus       332 d~~~~~  337 (490)
                      .++.+.
T Consensus       374 sl~~gh  379 (425)
T KOG2695|consen  374 SLDSGH  379 (425)
T ss_pred             ecccCc
Confidence            999765

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.70  E-value=3.3e-05  Score=74.43  Aligned_cols=260  Identities=11%  Similarity=0.060  Sum_probs=141.8

Q ss_pred             EEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccce
Q psy17682        129 EIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPV  208 (490)
Q Consensus       129 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  208 (490)
                      .+..+..+|.+..++..     +++..-....   ..........  ++ ..++.++.+|.+..+|..+|+.......  
T Consensus        67 ~v~v~~~~g~v~a~d~~-----tG~~~W~~~~---~~~~~~~p~v--~~-~~v~v~~~~g~l~ald~~tG~~~W~~~~--  133 (377)
T TIGR03300        67 KVYAADADGTVVALDAE-----TGKRLWRVDL---DERLSGGVGA--DG-GLVFVGTEKGEVIALDAEDGKELWRAKL--  133 (377)
T ss_pred             EEEEECCCCeEEEEEcc-----CCcEeeeecC---CCCcccceEE--cC-CEEEEEcCCCEEEEEECCCCcEeeeecc--
Confidence            45556677778877763     2322111111   1111112222  24 5778888899999999999987665432  


Q ss_pred             eeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEE-----EEEEcCCCCEEEEEeCCCeEE
Q psy17682        209 VDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVY-----SASWNWDGSKLLTTCKDKKMR  283 (490)
Q Consensus       209 ~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~l~~~~~dg~i~  283 (490)
                            ...+.+..... +. .++.++.++.+..+|.++|+.+.++........     +...  .+..++.+..++.+.
T Consensus       134 ------~~~~~~~p~v~-~~-~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~  203 (377)
T TIGR03300       134 ------SSEVLSPPLVA-NG-LVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVI--ADGGVLVGFAGGKLV  203 (377)
T ss_pred             ------CceeecCCEEE-CC-EEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEE--ECCEEEEECCCCEEE
Confidence                  11122111111 32 577777899999999999998887764322111     1111  234677888889999


Q ss_pred             EEeCCCCceeeeeeecCC---Cc-------eeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceee
Q psy17682        284 IINPRTGAIEEEAVCHEG---SK-------ATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMF  353 (490)
Q Consensus       284 iwd~~~~~~~~~~~~~~~---~~-------~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~  353 (490)
                      .+|.++++.+.+......   ..       .....+ .++.+++ ++   .++.+..+|..+++......   . .....
T Consensus       204 ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~-~~~~vy~-~~---~~g~l~a~d~~tG~~~W~~~---~-~~~~~  274 (377)
T TIGR03300       204 ALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVV-DGGQVYA-VS---YQGRVAALDLRSGRVLWKRD---A-SSYQG  274 (377)
T ss_pred             EEEccCCCEeeeeccccCCCCCchhhhhccCCccEE-ECCEEEE-EE---cCCEEEEEECCCCcEEEeec---c-CCccC
Confidence            999999987765431110   00       011111 1344444 44   47889999998875322221   1 11122


Q ss_pred             eeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCCce
Q psy17682        354 PLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSGLC  427 (490)
Q Consensus       354 ~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~~~  427 (490)
                      +.  .++..++ .++.||.+..+|..+++...+. ..... ....+....  +..++.+  ++.+.+++..+++.+
T Consensus       275 p~--~~~~~vy-v~~~~G~l~~~d~~tG~~~W~~-~~~~~-~~~ssp~i~--g~~l~~~~~~G~l~~~d~~tG~~~  343 (377)
T TIGR03300       275 PA--VDDNRLY-VTDADGVVVALDRRSGSELWKN-DELKY-RQLTAPAVV--GGYLVVGDFEGYLHWLSREDGSFV  343 (377)
T ss_pred             ce--EeCCEEE-EECCCCeEEEEECCCCcEEEcc-ccccC-CccccCEEE--CCEEEEEeCCCEEEEEECCCCCEE
Confidence            22  2456664 5668999999999998733221 11111 112222222  2233333  446666666666633

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG2695|consensus

Probab=98.70  E-value=8.1e-08  Score=84.42  Aligned_cols=155  Identities=15%  Similarity=0.171  Sum_probs=112.3

Q ss_pred             EeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceee
Q psy17682        131 RKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD  210 (490)
Q Consensus       131 ~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  210 (490)
                      .+.+.+..+.+.+++     ++-    .+.+ ..++.|.++.|...+ +++..|+..|.|..+|++.+..-..  .+...
T Consensus       228 fs~G~sqqv~L~nve-----tg~----~qsf-~sksDVfAlQf~~s~-nLv~~GcRngeI~~iDLR~rnqG~~--~~a~r  294 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVE-----TGH----QQSF-QSKSDVFALQFAGSD-NLVFNGCRNGEIFVIDLRCRNQGNG--WCAQR  294 (425)
T ss_pred             ecccccceeEEEEee-----ccc----cccc-ccchhHHHHHhcccC-CeeEecccCCcEEEEEeeecccCCC--cceEE
Confidence            445556666666664     111    1122 256789999999866 8999999999999999986522111  12222


Q ss_pred             ecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee---EEEEecCCCcEEE--EEEcCCCCEEEEEeCCCeEEEE
Q psy17682        211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI---MIQIECHPDIVYS--ASWNWDGSKLLTTCKDKKMRII  285 (490)
Q Consensus       211 ~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~---~~~~~~~~~~v~~--~~~~~~~~~l~~~~~dg~i~iw  285 (490)
                      + .|.+.|+++......+..|++.+.+|+|++||++.-++   +.++.+|-..-.-  +...+....+++++.|...|||
T Consensus       295 l-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiW  373 (425)
T KOG2695|consen  295 L-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIW  373 (425)
T ss_pred             E-EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEE
Confidence            2 39999999998873335888889999999999997666   8888888544333  3345566788999999999999


Q ss_pred             eCCCCceeeeeeec
Q psy17682        286 NPRTGAIEEEAVCH  299 (490)
Q Consensus       286 d~~~~~~~~~~~~~  299 (490)
                      .++.+..+.++...
T Consensus       374 sl~~ghLl~tipf~  387 (425)
T KOG2695|consen  374 SLDSGHLLCTIPFP  387 (425)
T ss_pred             ecccCceeeccCCC
Confidence            99999998887643

>KOG0882|consensus

Probab=98.68  E-value=8e-07  Score=81.02  Aligned_cols=254  Identities=11%  Similarity=0.026  Sum_probs=166.8

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC-CCcEE
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS-DNNVA  241 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-dg~v~  241 (490)
                      -|.+.|+.+....  ..++.+++.||.++.|.-..-..+.    -+..+..|...|.+++.+-++ .++.+.+. |..++
T Consensus         7 mhrd~i~hv~~tk--a~fiiqASlDGh~KFWkKs~isGvE----fVKhFraHL~~I~sl~~S~dg-~L~~Sv~d~Dhs~K   79 (558)
T KOG0882|consen    7 MHRDVITHVFPTK--AKFIIQASLDGHKKFWKKSRISGVE----FVKHFRAHLGVILSLAVSYDG-WLFRSVEDPDHSVK   79 (558)
T ss_pred             cccceeeeEeeeh--hheEEeeecchhhhhcCCCCcccee----ehhhhHHHHHHHHhhhccccc-eeEeeccCccccee
Confidence            4888888887665  3699999999999999843212111    112255688889999999998 48888777 99999


Q ss_pred             EEECCCCeeEEEEe--cCCCcEEEEEEcCCC--CEEEEEe-CCCeEEEEeCCCCce-eeeee-ecCCCceeEEEEeCCCc
Q psy17682        242 IWNVGTGEIMIQIE--CHPDIVYSASWNWDG--SKLLTTC-KDKKMRIINPRTGAI-EEEAV-CHEGSKATRAIYLKSGL  314 (490)
Q Consensus       242 iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~--~~l~~~~-~dg~i~iwd~~~~~~-~~~~~-~~~~~~~~~~~~s~~~~  314 (490)
                      ++|+.+-..+..++  ...+.+. ...++..  ..|+++. .++.+.++|-+...+ ..-+. .|.. ++..+.+.+.+.
T Consensus        80 vfDvEn~DminmiKL~~lPg~a~-wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~s-PV~~i~y~qa~D  157 (558)
T KOG0882|consen   80 VFDVENFDMINMIKLVDLPGFAE-WVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFS-PVKKIRYNQAGD  157 (558)
T ss_pred             EEEeeccchhhhcccccCCCceE-EecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccC-ceEEEEeecccc
Confidence            99998766543333  1222222 2223221  1344333 578899999876542 22333 4444 599999999999


Q ss_pred             EEEEEeCCCceeEEEEecCCC-CCCCeE------------EEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        315 IFTTGFSKMSERQYSLRAPDH-LDEPIV------------MVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       315 ~l~~~~~~~~~~~i~iwd~~~-~~~~~~------------~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      .+++..   ..|.|.-|.... .+.|..            +..........++.|+|+|..+ .+-+.|..|++++..++
T Consensus       158 s~vSiD---~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qi-stl~~DrkVR~F~~KtG  233 (558)
T KOG0882|consen  158 SAVSID---ISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQI-STLNPDRKVRGFVFKTG  233 (558)
T ss_pred             ceeecc---ccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcc-cccCcccEEEEEEeccc
Confidence            888876   678999999873 111111            1111233457889999999998 77779999999999988


Q ss_pred             CCeeEEeeee-----------------------------e-C-CCceeeEEEeeCceeEEeecc-eeEEEEecCCCceEE
Q psy17682        382 PPFVHYINTF-----------------------------Q-T-PDPQRGIGMMPKRGCDVNSCE-IGRFFRLNNSGLCQV  429 (490)
Q Consensus       382 ~~~~~~~~~~-----------------------------~-~-~~~i~~~~~sp~~~~l~~~~~-~~~~~~~~~~~~~~~  429 (490)
                      +.. +.+...                             . + ...-+.+.|...+.+++.+.- -+++.++.++...+.
T Consensus       234 klv-qeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~gikvin~~tn~v~ri  312 (558)
T KOG0882|consen  234 KLV-QEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILGIKVINLDTNTVVRI  312 (558)
T ss_pred             hhh-hhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeecceeEEEEEeecCeEEEE
Confidence            621 111100                             0 0 012355678888888777754 568899998884444


Q ss_pred             E
Q psy17682        430 V  430 (490)
Q Consensus       430 i  430 (490)
                      +
T Consensus       313 ~  313 (558)
T KOG0882|consen  313 L  313 (558)
T ss_pred             e
Confidence            3

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.68  E-value=9.5e-08  Score=58.14  Aligned_cols=39  Identities=23%  Similarity=0.440  Sum_probs=36.9

Q ss_pred             CeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy17682        248 GEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIIN  286 (490)
Q Consensus       248 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd  286 (490)
                      ++++.++.+|.+.|.+++|+|++++|++++.|++|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            467889999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.63  E-value=0.0001  Score=66.00  Aligned_cols=189  Identities=11%  Similarity=0.081  Sum_probs=121.2

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEE-----eCCCcEEEEECC-CCCcccccccceeeecccccCEEEEEEeeCCCCEE
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASG-----SEDCVVKVWQIP-DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVL  231 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~-----~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l  231 (490)
                      -+.+.||.      .|+|+| ++|++.     ...|.|-|||.. +-+.+..       +..|.-....+.+.|+++ .|
T Consensus        49 gRHFyGHg------~fs~dG-~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E-------~~s~GIGPHel~l~pDG~-tL  113 (305)
T PF07433_consen   49 GRHFYGHG------VFSPDG-RLLYTTENDYETGRGVIGVYDAARGYRRIGE-------FPSHGIGPHELLLMPDGE-TL  113 (305)
T ss_pred             CCEEecCE------EEcCCC-CEEEEeccccCCCcEEEEEEECcCCcEEEeE-------ecCCCcChhhEEEcCCCC-EE
Confidence            34566773      799999 677775     335899999987 2222222       444666677889999996 45


Q ss_pred             EEEe------------------CCCcEEEEECCCCeeEEEEe----cCCCcEEEEEEcCCCCEEEEEeCCCe-------E
Q psy17682        232 LTAG------------------SDNNVAIWNVGTGEIMIQIE----CHPDIVYSASWNWDGSKLLTTCKDKK-------M  282 (490)
Q Consensus       232 ~s~~------------------~dg~v~iwd~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~dg~-------i  282 (490)
                      +++-                  .+-.+...|..+|+.+.+..    .|...|..+++.++|..++..-..|.       +
T Consensus       114 vVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLv  193 (305)
T PF07433_consen  114 VVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLV  193 (305)
T ss_pred             EEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeE
Confidence            5441                  22345566778888777633    37778999999999877666544332       4


Q ss_pred             EEEeCCCCceeeeee-------ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeee
Q psy17682        283 RIINPRTGAIEEEAV-------CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPL  355 (490)
Q Consensus       283 ~iwd~~~~~~~~~~~-------~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~  355 (490)
                      .+++-.  +.+..+.       .-.+ .+-++++++++.++++.+.  ..+.+.+||..++..    .....-..+..++
T Consensus       194 a~~~~g--~~~~~~~~p~~~~~~l~~-Y~gSIa~~~~g~~ia~tsP--rGg~~~~~d~~tg~~----~~~~~l~D~cGva  264 (305)
T PF07433_consen  194 ALHRRG--GALRLLPAPEEQWRRLNG-YIGSIAADRDGRLIAVTSP--RGGRVAVWDAATGRL----LGSVPLPDACGVA  264 (305)
T ss_pred             EEEcCC--CcceeccCChHHHHhhCC-ceEEEEEeCCCCEEEEECC--CCCEEEEEECCCCCE----eeccccCceeeee
Confidence            444332  2222222       1123 3899999999998887775  578999999998762    2222334566777


Q ss_pred             ecCCCCeEEEEecCCCeE
Q psy17682        356 YDPDTNLVYLCGKGDSVI  373 (490)
Q Consensus       356 ~s~~~~~l~~~g~~dg~i  373 (490)
                      -.+++ ++ ++. ..|.+
T Consensus       265 ~~~~~-f~-~ss-G~G~~  279 (305)
T PF07433_consen  265 PTDDG-FL-VSS-GQGQL  279 (305)
T ss_pred             ecCCc-eE-EeC-CCccE
Confidence            66666 55 333 34543

>KOG1920|consensus

Probab=98.59  E-value=2.2e-05  Score=80.65  Aligned_cols=206  Identities=12%  Similarity=0.163  Sum_probs=135.5

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN  244 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd  244 (490)
                      .+.|.++.|..+. +-++.+..+|.|.+-|.++.....        ...-...|.+++|+|+++ .++..+..+++.+-.
T Consensus        68 d~~i~s~~fl~d~-~~i~v~~~~G~iilvd~et~~~ei--------vg~vd~GI~aaswS~Dee-~l~liT~~~tll~mT  137 (1265)
T KOG1920|consen   68 DDEIVSVQFLADT-NSICVITALGDIILVDPETLELEI--------VGNVDNGISAASWSPDEE-LLALITGRQTLLFMT  137 (1265)
T ss_pred             CcceEEEEEeccc-ceEEEEecCCcEEEEcccccceee--------eeeccCceEEEeecCCCc-EEEEEeCCcEEEEEe
Confidence            3689999999887 778888889999999876654321        122567899999999996 777777767766533


Q ss_pred             CC----CCee-------------------EEEEecC---------------------CCcEEEEEEcCCCCEEEEEe---
Q psy17682        245 VG----TGEI-------------------MIQIECH---------------------PDIVYSASWNWDGSKLLTTC---  277 (490)
Q Consensus       245 ~~----~~~~-------------------~~~~~~~---------------------~~~v~~~~~~~~~~~l~~~~---  277 (490)
                      -.    ..++                   -..|.+.                     .+.=+++.|--||+++++..   
T Consensus       138 ~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~  217 (1265)
T KOG1920|consen  138 KDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVES  217 (1265)
T ss_pred             ccccchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEec
Confidence            20    0000                   0112110                     11123589999999999843   


Q ss_pred             -CC-CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC-Cceeee
Q psy17682        278 -KD-KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS-NGVMFP  354 (490)
Q Consensus       278 -~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~-~~i~~~  354 (490)
                       .+ +.|++||-. +..-.+-....+ .-.+++|-|.|.++++-..+.+++.|.++.......-.......-. ..+..+
T Consensus       218 ~~~~RkirV~drE-g~Lns~se~~~~-l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L  295 (1265)
T KOG1920|consen  218 ETGTRKIRVYDRE-GALNSTSEPVEG-LQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEEL  295 (1265)
T ss_pred             cCCceeEEEeccc-chhhcccCcccc-cccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchhee
Confidence             23 789999977 443322222222 2578899999999998877777888999986654322111112222 238999


Q ss_pred             eecCCCCeEEEE--ecCCCeEEEEEecCCC
Q psy17682        355 LYDPDTNLVYLC--GKGDSVIRYFEITAEP  382 (490)
Q Consensus       355 ~~s~~~~~l~~~--g~~dg~i~iwd~~~~~  382 (490)
                      +|+.++..|++.  ......|++|-+.+-.
T Consensus       296 ~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh  325 (1265)
T KOG1920|consen  296 AWNSNSDILAVVTSNLENSLVQLWTTGNYH  325 (1265)
T ss_pred             eecCCCCceeeeecccccceEEEEEecCeE
Confidence            999999998431  3344569999988764

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.58  E-value=4.6e-06  Score=79.97  Aligned_cols=191  Identities=12%  Similarity=0.120  Sum_probs=123.5

Q ss_pred             cccCEEEEEEeeCCCCEEEEEeCC---CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe-CCCe--EEEEeC
Q psy17682        214 HQRRVGLVLWHPTAQNVLLTAGSD---NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KDKK--MRIINP  287 (490)
Q Consensus       214 ~~~~v~~~~~~p~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~--i~iwd~  287 (490)
                      ....+..-.|+|++..+....-..   ..+.++++.+++....+. ..+.-...+|+|||+.|+.+. .||.  |+++|+
T Consensus       191 ~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl  269 (425)
T COG0823         191 SGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDL  269 (425)
T ss_pred             cCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCCCccEEEEcC
Confidence            445677889999987544332222   358999999887555444 233345678999998777654 4554  888888


Q ss_pred             CCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEe
Q psy17682        288 RTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCG  367 (490)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g  367 (490)
                      ..+...+ +....+ .-+.-.|+|||+.++..++.+..-.|.+++...........  .. ..-....++|||++++..+
T Consensus       270 ~~~~~~~-Lt~~~g-i~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~--~~-~~~~~p~~SpdG~~i~~~~  344 (425)
T COG0823         270 DGKNLPR-LTNGFG-INTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTF--SG-GGNSNPVWSPDGDKIVFES  344 (425)
T ss_pred             CCCccee-cccCCc-cccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeec--cC-CCCcCccCCCCCCEEEEEe
Confidence            8777433 332222 24567799999999988876656678888887655322222  22 2223788999999997777


Q ss_pred             cCCCe--EEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc
Q psy17682        368 KGDSV--IRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       368 ~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  414 (490)
                      ..+|.  |.+.|+.++..    ...+........-.|.|++..+....+
T Consensus       345 ~~~g~~~i~~~~~~~~~~----~~~lt~~~~~e~ps~~~ng~~i~~~s~  389 (425)
T COG0823         345 SSGGQWDIDKNDLASGGK----IRILTSTYLNESPSWAPNGRMIMFSSG  389 (425)
T ss_pred             ccCCceeeEEeccCCCCc----EEEccccccCCCCCcCCCCceEEEecc
Confidence            55565  66666666642    222233334556778899888776644

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.56  E-value=7.2e-05  Score=71.84  Aligned_cols=203  Identities=13%  Similarity=0.167  Sum_probs=126.5

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCC---CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCc
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSED---CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNN  239 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~  239 (490)
                      .-...+..-+|+|++..+....-..   ..+.++++.+++......        ..+.-...+|+|+|+.++++...||.
T Consensus       190 ~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~--------~~g~~~~P~fspDG~~l~f~~~rdg~  261 (425)
T COG0823         190 DSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN--------FNGNNGAPAFSPDGSKLAFSSSRDGS  261 (425)
T ss_pred             ccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec--------cCCccCCccCCCCCCEEEEEECCCCC
Confidence            3455677789999985544443222   358999998887654433        33344567899999877888888876


Q ss_pred             E--EEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC-CCe--EEEEeCCCCceeeeeeecCCCceeEEEEeCCCc
Q psy17682        240 V--AIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK-DKK--MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL  314 (490)
Q Consensus       240 v--~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~  314 (490)
                      .  .+.|+..++ ...+....+.-..-.|+|||+.|+..+. .|.  |.++|...+... .+....+. -....|+|||+
T Consensus       262 ~~iy~~dl~~~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~-riT~~~~~-~~~p~~SpdG~  338 (425)
T COG0823         262 PDIYLMDLDGKN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVT-RLTFSGGG-NSNPVWSPDGD  338 (425)
T ss_pred             ccEEEEcCCCCc-ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCcee-EeeccCCC-CcCccCCCCCC
Confidence            4  555776665 3335533343446789999998887664 343  777787766653 33322222 33778999999


Q ss_pred             EEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        315 IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       315 ~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      +++..+..+..-.|.+.|+.+...   ..............|.++|+.+...++.-+.=.++.+.
T Consensus       339 ~i~~~~~~~g~~~i~~~~~~~~~~---~~~lt~~~~~e~ps~~~ng~~i~~~s~~~~~~~l~~~s  400 (425)
T COG0823         339 KIVFESSSGGQWDIDKNDLASGGK---IRILTSTYLNESPSWAPNGRMIMFSSGQGGGSVLSLVS  400 (425)
T ss_pred             EEEEEeccCCceeeEEeccCCCCc---EEEccccccCCCCCcCCCCceEEEeccCCCCceEEEee
Confidence            998776321224466777766543   23333444456778899998886655443333344333

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.54  E-value=2e-05  Score=70.46  Aligned_cols=183  Identities=14%  Similarity=0.153  Sum_probs=115.0

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE-ecC
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI-ECH  257 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~  257 (490)
                      ..+++++.++.+..||..+|+.+.....+        ..+.......++  .++.+..++.++.+|..+|+.+... ...
T Consensus        37 ~~v~~~~~~~~l~~~d~~tG~~~W~~~~~--------~~~~~~~~~~~~--~v~v~~~~~~l~~~d~~tG~~~W~~~~~~  106 (238)
T PF13360_consen   37 GRVYVASGDGNLYALDAKTGKVLWRFDLP--------GPISGAPVVDGG--RVYVGTSDGSLYALDAKTGKVLWSIYLTS  106 (238)
T ss_dssp             TEEEEEETTSEEEEEETTTSEEEEEEECS--------SCGGSGEEEETT--EEEEEETTSEEEEEETTTSCEEEEEEE-S
T ss_pred             CEEEEEcCCCEEEEEECCCCCEEEEeecc--------ccccceeeeccc--ccccccceeeeEecccCCcceeeeecccc
Confidence            57777789999999999999876654421        111111222233  5677778889999999999998884 322


Q ss_pred             C---CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCc---------eeEEEEeCCCcEEEEEeCCCce
Q psy17682        258 P---DIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSK---------ATRAIYLKSGLIFTTGFSKMSE  325 (490)
Q Consensus       258 ~---~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---------~~~~~~s~~~~~l~~~~~~~~~  325 (490)
                      .   ...........+..++++..++.|..+|+++|+.+..........         ...-....++.++++..    +
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~----~  182 (238)
T PF13360_consen  107 SPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVYVSSG----D  182 (238)
T ss_dssp             SCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEEEECC----T
T ss_pred             ccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECCEEEEEcC----C
Confidence            1   111222233347888888889999999999999988876533210         11222333455555443    3


Q ss_pred             e-EEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        326 R-QYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       326 ~-~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      + .+.+ |..+++..   .... ...... ....++..|++. +.++.|..||+.+++
T Consensus       183 g~~~~~-d~~tg~~~---w~~~-~~~~~~-~~~~~~~~l~~~-~~~~~l~~~d~~tG~  233 (238)
T PF13360_consen  183 GRVVAV-DLATGEKL---WSKP-ISGIYS-LPSVDGGTLYVT-SSDGRLYALDLKTGK  233 (238)
T ss_dssp             SSEEEE-ETTTTEEE---EEEC-SS-ECE-CEECCCTEEEEE-ETTTEEEEEETTTTE
T ss_pred             CeEEEE-ECCCCCEE---EEec-CCCccC-CceeeCCEEEEE-eCCCEEEEEECCCCC
Confidence            4 4666 88887622   2212 222222 245677888554 489999999999997

...

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.52  E-value=2.3e-05  Score=70.11  Aligned_cols=216  Identities=13%  Similarity=0.093  Sum_probs=123.3

Q ss_pred             CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEE
Q psy17682        187 DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASW  266 (490)
Q Consensus       187 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~  266 (490)
                      +|+|..||..+++.+.....     ..-.....+.. .+++. .+++++.++.|..||..+|+.+.++.. ...+.... 
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~-----~~~~~~~~~~~-~~~~~-~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~-   72 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDL-----GPGIGGPVATA-VPDGG-RVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAP-   72 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEEC-----SSSCSSEEETE-EEETT-EEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGE-
T ss_pred             CCEEEEEECCCCCEEEEEEC-----CCCCCCccceE-EEeCC-EEEEEcCCCEEEEEECCCCCEEEEeec-ccccccee-
Confidence            68899999988887766431     10012222222 22343 677778999999999999999888874 22221111 


Q ss_pred             cCCCCEEEEEeCCCeEEEEeCCCCceeeee-eecCC-C-ceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEE
Q psy17682        267 NWDGSKLLTTCKDKKMRIINPRTGAIEEEA-VCHEG-S-KATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMV  343 (490)
Q Consensus       267 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~-~-~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~  343 (490)
                      ...+..+++++.++.++.+|..+++.+... ..... . ..........+..++++.   .++.+..+|+++++......
T Consensus        73 ~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~l~~~d~~tG~~~w~~~  149 (238)
T PF13360_consen   73 VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGT---SSGKLVALDPKTGKLLWKYP  149 (238)
T ss_dssp             EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEE---TCSEEEEEETTTTEEEEEEE
T ss_pred             eecccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEe---ccCcEEEEecCCCcEEEEee
Confidence            224566777778899999999999998884 32211 1 122222333366666665   47899999999876433333


Q ss_pred             eccCCCc---------e-eeeeecCCCCeEEEEecCCCe-EEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee
Q psy17682        344 ELDTSNG---------V-MFPLYDPDTNLVYLCGKGDSV-IRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS  412 (490)
Q Consensus       344 ~~~~~~~---------i-~~~~~s~~~~~l~~~g~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~  412 (490)
                      . .....         + ..+.+. ++ .+++ ++.++. +.+ |+.+++..    .... ...+..+ ...++..++..
T Consensus       150 ~-~~~~~~~~~~~~~~~~~~~~~~-~~-~v~~-~~~~g~~~~~-d~~tg~~~----w~~~-~~~~~~~-~~~~~~~l~~~  218 (238)
T PF13360_consen  150 V-GEPRGSSPISSFSDINGSPVIS-DG-RVYV-SSGDGRVVAV-DLATGEKL----WSKP-ISGIYSL-PSVDGGTLYVT  218 (238)
T ss_dssp             S-STT-SS--EEEETTEEEEEECC-TT-EEEE-ECCTSSEEEE-ETTTTEEE----EEEC-SS-ECEC-EECCCTEEEEE
T ss_pred             c-CCCCCCcceeeecccccceEEE-CC-EEEE-EcCCCeEEEE-ECCCCCEE----EEec-CCCccCC-ceeeCCEEEEE
Confidence            2 22111         1 223333 44 6644 445664 555 99998722    1111 1223332 23444444433


Q ss_pred             --cceeEEEEecCCC
Q psy17682        413 --CEIGRFFRLNNSG  425 (490)
Q Consensus       413 --~~~~~~~~~~~~~  425 (490)
                        .+.+..|++.+++
T Consensus       219 ~~~~~l~~~d~~tG~  233 (238)
T PF13360_consen  219 SSDGRLYALDLKTGK  233 (238)
T ss_dssp             ETTTEEEEEETTTTE
T ss_pred             eCCCEEEEEECCCCC
Confidence              4677778877775

...

>KOG1008|consensus

Probab=98.51  E-value=1.5e-07  Score=89.52  Aligned_cols=204  Identities=14%  Similarity=0.136  Sum_probs=137.4

Q ss_pred             cCCeeEEEECCCCC-CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe----CCCc
Q psy17682        165 KGPVLDIAWSPHDD-NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG----SDNN  239 (490)
Q Consensus       165 ~~~V~~~~~~p~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~----~dg~  239 (490)
                      ...+.|+++.-+.+ .+++.|..+|.|-+-.++.....     ......++...+++++|++-..+.||+|-    .|..
T Consensus        56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdS-----s~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~  130 (783)
T KOG1008|consen   56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDS-----SAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSS  130 (783)
T ss_pred             CCCceeehhhcCCchhhhhhccccCceEEeecCCcccc-----cceecccccccccccccccccHHHHHhhhhhhcccCC
Confidence            45678888765443 67889999999999988755432     11124458889999999998666777773    3567


Q ss_pred             EEEEECCCC--eeEE--EEec-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-eeeeeecCCCceeEEEEeC-C
Q psy17682        240 VAIWNVGTG--EIMI--QIEC-HPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLK-S  312 (490)
Q Consensus       240 v~iwd~~~~--~~~~--~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~s~-~  312 (490)
                      +.|||+.++  .+..  .|.. ......+++|..+.+++++|...+.+.++|+|.... ...+.  .. .+..+..+| .
T Consensus       131 ~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svn--Tk-~vqG~tVdp~~  207 (783)
T KOG1008|consen  131 LKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVN--TK-YVQGITVDPFS  207 (783)
T ss_pred             ccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhh--hh-hcccceecCCC
Confidence            999999876  2221  1222 334566889998889999999999999999994321 11111  11 155566777 6


Q ss_pred             CcEEEEEeCCCceeEEEEec-CCCCCCCeEEEecc---CCCceeeeeecCCCCeEEEEecC-CCeEEEEEecC
Q psy17682        313 GLIFTTGFSKMSERQYSLRA-PDHLDEPIVMVELD---TSNGVMFPLYDPDTNLVYLCGKG-DSVIRYFEITA  380 (490)
Q Consensus       313 ~~~l~~~~~~~~~~~i~iwd-~~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~g~~-dg~i~iwd~~~  380 (490)
                      +.++++-.    ++.+.+|| .++.+.+.......   ....+..++|+|...-++++.+. .++|++||+..
T Consensus       208 ~nY~cs~~----dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~  276 (783)
T KOG1008|consen  208 PNYFCSNS----DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV  276 (783)
T ss_pred             CCceeccc----cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence            77887664    89999999 55555443322111   12248899999976655455544 47999999863

>KOG1832|consensus

Probab=98.48  E-value=8.3e-08  Score=94.26  Aligned_cols=221  Identities=10%  Similarity=0.064  Sum_probs=148.1

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      +..++..|+..-+|++|+-.. +.|+.|+..|.|++++..+|...                                   
T Consensus      1093 ~w~~frd~~~~fTc~afs~~~-~hL~vG~~~Geik~~nv~sG~~e----------------------------------- 1136 (1516)
T KOG1832|consen 1093 SWRSFRDETALFTCIAFSGGT-NHLAVGSHAGEIKIFNVSSGSME----------------------------------- 1136 (1516)
T ss_pred             cchhhhccccceeeEEeecCC-ceEEeeeccceEEEEEccCcccc-----------------------------------
Confidence            445677788888888888777 77777888888888887775411                                   


Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC-cEEEEE
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC-VVKVWQ  194 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg-~i~iwd  194 (490)
                                                                 ....+|..+|+-+.=+.+|...|.+++... -..+|+
T Consensus      1137 -------------------------------------------~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~ 1173 (1516)
T KOG1832|consen 1137 -------------------------------------------ESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWD 1173 (1516)
T ss_pred             -------------------------------------------ccccccccccccccccCCcceeeeeccccCchHHHhc
Confidence                                                       123579999999999988855555444443 567999


Q ss_pred             CCCC-CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE-e---cCCCcEEEEEEcCC
Q psy17682        195 IPDG-GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI-E---CHPDIVYSASWNWD  269 (490)
Q Consensus       195 ~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~---~~~~~v~~~~~~~~  269 (490)
                      +..- ...+.+           ..-.++.|+.... .-+.|.......+||++++.++.++ .   +....-++..|+|+
T Consensus      1174 ~~s~~~~~Hsf-----------~ed~~vkFsn~~q-~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~ 1241 (1516)
T KOG1832|consen 1174 ASSTGGPRHSF-----------DEDKAVKFSNSLQ-FRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPC 1241 (1516)
T ss_pred             cccccCccccc-----------cccceeehhhhHH-HHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCC
Confidence            8642 222221           2346788887653 3445555567899999998877663 2   12222367889999


Q ss_pred             CCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCC
Q psy17682        270 GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSN  349 (490)
Q Consensus       270 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~  349 (490)
                      ..+++-   ||  .+||++..+.++.+.....  ...-.|+|.|.-++.-+        .|||+++.+....+..    -
T Consensus      1242 D~LIln---dG--vLWDvR~~~aIh~FD~ft~--~~~G~FHP~g~eVIINS--------EIwD~RTF~lLh~VP~----L 1302 (1516)
T KOG1832|consen 1242 DTLILN---DG--VLWDVRIPEAIHRFDQFTD--YGGGGFHPSGNEVIINS--------EIWDMRTFKLLHSVPS----L 1302 (1516)
T ss_pred             cceEee---Cc--eeeeeccHHHHhhhhhhee--cccccccCCCceEEeec--------hhhhhHHHHHHhcCcc----c
Confidence            887773   45  5799998887777654332  34456999999887765        3899998653222221    1


Q ss_pred             ceeeeeecCCCCeEEEE
Q psy17682        350 GVMFPLYDPDTNLVYLC  366 (490)
Q Consensus       350 ~i~~~~~s~~~~~l~~~  366 (490)
                      .-..+.|+..|..+|++
T Consensus      1303 dqc~VtFNstG~VmYa~ 1319 (1516)
T KOG1832|consen 1303 DQCAVTFNSTGDVMYAM 1319 (1516)
T ss_pred             cceEEEeccCccchhhh
Confidence            23567888888887654

>KOG1275|consensus

Probab=98.47  E-value=1.1e-05  Score=80.23  Aligned_cols=184  Identities=9%  Similarity=0.037  Sum_probs=132.2

Q ss_pred             CEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEE
Q psy17682        229 NVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAI  308 (490)
Q Consensus       229 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  308 (490)
                      ..++-|+....+..+|+++.+..+...-..+.|.-|..  +++++.+|...|+|.+-|.++.+.+.++..|.+. +.  .
T Consensus       148 ~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~s-iS--D  222 (1118)
T KOG1275|consen  148 STLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGS-IS--D  222 (1118)
T ss_pred             cceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccc-ee--e
Confidence            35777778888899999998877776644545666665  5899999999999999999999999999999875 44  5


Q ss_pred             EeCCCcEEEEEeCCC------ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC-
Q psy17682        309 YLKSGLIFTTGFSKM------SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE-  381 (490)
Q Consensus       309 ~s~~~~~l~~~~~~~------~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~-  381 (490)
                      |+-.|++|++++-.+      .|..|++||++..+....+.   ...+-.-+.|.|.-...++..+..|...+-|..+- 
T Consensus       223 fDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~---~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~ls  299 (1118)
T KOG1275|consen  223 FDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQ---FPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLS  299 (1118)
T ss_pred             eeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcc---cccCchhhhhcccccceEEEEecccceeeccccccC
Confidence            666788887765322      36778999999876533332   22233556778865544467778899999994432 


Q ss_pred             CCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEE
Q psy17682        382 PPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFR  420 (490)
Q Consensus       382 ~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~  420 (490)
                      .|..........+..+.++++|+++..++.+  ++.+.+|.
T Consensus       300 NP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  300 NPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             CCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence            2222233223334459999999999999988  45777787

>KOG2066|consensus

Probab=98.44  E-value=1.3e-05  Score=78.58  Aligned_cols=181  Identities=10%  Similarity=0.098  Sum_probs=123.5

Q ss_pred             cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEE
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVK  191 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~  191 (490)
                      .+.+.+++..       .++-+.-.|.+.++....+.          .+...|...      .-+| .+++||+.||+|.
T Consensus        41 ~is~~av~~~-------~~~~GtH~g~v~~~~~~~~~----------~~~~~~s~~------~~~G-ey~asCS~DGkv~   96 (846)
T KOG2066|consen   41 AISCCAVHDK-------FFALGTHRGAVYLTTCQGNP----------KTNFDHSSS------ILEG-EYVASCSDDGKVV   96 (846)
T ss_pred             HHHHHHhhcc-------eeeeccccceEEEEecCCcc----------ccccccccc------ccCC-ceEEEecCCCcEE
Confidence            4555556544       46677888899988875211          122244433      4456 8999999999999


Q ss_pred             EEECCCCCcccccccceeeecccccCEEEEEEeeC----CCCEEEEEeCCCcEEEEECC---CCeeEEEEecCCCcEEEE
Q psy17682        192 VWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT----AQNVLLTAGSDNNVAIWNVG---TGEIMIQIECHPDIVYSA  264 (490)
Q Consensus       192 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~----~~~~l~s~~~dg~v~iwd~~---~~~~~~~~~~~~~~v~~~  264 (490)
                      |-.+-+.+....+.        ...++.+++++|+    ....+++||.-| +.++.-+   ....+ .+....++|.++
T Consensus        97 I~sl~~~~~~~~~d--------f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-~l~~~eG~I~~i  166 (846)
T KOG2066|consen   97 IGSLFTDDEITQYD--------FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-VLSEGEGPIHSI  166 (846)
T ss_pred             EeeccCCccceeEe--------cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce-eeecCccceEEE
Confidence            99988877655433        5678999999998    224799999988 7776532   22222 355568899999


Q ss_pred             EEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCC-----ceeEEEEeCCCcEEEEEeCCCceeEEEEecCC
Q psy17682        265 SWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGS-----KATRAIYLKSGLIFTTGFSKMSERQYSLRAPD  334 (490)
Q Consensus       265 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~  334 (490)
                      .|.  |+++|-++.+| |++||+.+++.+..+......     ....+.|.++.+++ .|-    ..+|+|..++
T Consensus       167 ~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LV-IGW----~d~v~i~~I~  233 (846)
T KOG2066|consen  167 KWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLV-IGW----GDSVKICSIK  233 (846)
T ss_pred             Eec--CcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEE-Eec----CCeEEEEEEe
Confidence            997  78888887666 899999998877766533221     24566777776655 453    4466666666

>KOG1645|consensus

Probab=98.44  E-value=4e-05  Score=69.35  Aligned_cols=260  Identities=15%  Similarity=0.120  Sum_probs=145.7

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK  104 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (490)
                      ...+++.+.-. ...+.+|..-|..++|+|..+.++..++.++.|+|.|+.+...                         
T Consensus       175 v~~l~~~~fks-sq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~-------------------------  228 (463)
T KOG1645|consen  175 VQKLESHDFKS-SQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCV-------------------------  228 (463)
T ss_pred             eEEeccCCcch-hhcccccchhhhhhccCccccceeeeeccCceEEEEeccccee-------------------------
Confidence            34445544333 4478889999999999999867899999999999999887431                         


Q ss_pred             CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE
Q psy17682        105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG  184 (490)
Q Consensus       105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~  184 (490)
                                                                           ...+..| ..+++++|.-+..+++..|
T Consensus       229 -----------------------------------------------------vssy~a~-~~~wSC~wDlde~h~IYaG  254 (463)
T KOG1645|consen  229 -----------------------------------------------------VSSYIAY-NQIWSCCWDLDERHVIYAG  254 (463)
T ss_pred             -----------------------------------------------------eeheecc-CCceeeeeccCCcceeEEe
Confidence                                                                 0112234 6899999999888999999


Q ss_pred             eCCCcEEEEECCCCCcccccccceeeecc--cccCEEEEE------EeeCCCCEEEEEeCCCcEEEEECCC--CeeEEEE
Q psy17682        185 SEDCVVKVWQIPDGGISRTLTEPVVDLLY--HQRRVGLVL------WHPTAQNVLLTAGSDNNVAIWNVGT--GEIMIQI  254 (490)
Q Consensus       185 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~v~~~~------~~p~~~~~l~s~~~dg~v~iwd~~~--~~~~~~~  254 (490)
                      ...|.|.+||++..+.....      +.+  ...+|..++      ..+.+. +++....+  +..|++.-  +.....+
T Consensus       255 l~nG~VlvyD~R~~~~~~~e------~~a~~t~~pv~~i~~~~~n~~f~~gg-lLv~~lt~--l~f~ei~~s~~~~p~vl  325 (463)
T KOG1645|consen  255 LQNGMVLVYDMRQPEGPLME------LVANVTINPVHKIAPVQPNKIFTSGG-LLVFALTV--LQFYEIVFSAECLPCVL  325 (463)
T ss_pred             ccCceEEEEEccCCCchHhh------hhhhhccCcceeecccCccccccccc-eEEeeehh--hhhhhhhccccCCCccc
Confidence            99999999999865432110      100  112333332      233343 44444433  45666542  2222222


Q ss_pred             e-cCCCcEEEEEEcCCCCEEEEEeCCC-------eEE-EEeCCCCceeeeee-ecCCCce-----eEEEE-eCCCcEEEE
Q psy17682        255 E-CHPDIVYSASWNWDGSKLLTTCKDK-------KMR-IINPRTGAIEEEAV-CHEGSKA-----TRAIY-LKSGLIFTT  318 (490)
Q Consensus       255 ~-~~~~~v~~~~~~~~~~~l~~~~~dg-------~i~-iwd~~~~~~~~~~~-~~~~~~~-----~~~~~-s~~~~~l~~  318 (490)
                      + +..+.+.++++++-.+.++.....+       .+- --|-++|..+...+ .+.+.+-     ....+ .++..+++.
T Consensus       326 ele~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~  405 (463)
T KOG1645|consen  326 ELEPPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVV  405 (463)
T ss_pred             ccCCCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEE
Confidence            2 2356677777777555555544321       011 11222333322211 1111111     11112 344444443


Q ss_pred             EeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecC-CC-CeEEEEecCCCeEEEEEecC
Q psy17682        319 GFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDP-DT-NLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       319 ~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~-~~-~~l~~~g~~dg~i~iwd~~~  380 (490)
                      -++  ..+.+.+||..+.+.   .........+..++... ++ .+| + .-.|..++||..+.
T Consensus       406 ~gd--~tn~lil~D~~s~ev---vQ~l~~~epv~Dicp~~~n~~syL-a-~LTd~~v~Iyk~es  462 (463)
T KOG1645|consen  406 VGD--STNELILQDPHSFEV---VQTLALSEPVLDICPNDTNGSSYL-A-LLTDDRVHIYKNES  462 (463)
T ss_pred             ecC--CcceeEEeccchhhe---eeecccCcceeecceeecCCcchh-h-heecceEEEEecCC
Confidence            332  578899999998763   33334446666665433 33 344 3 33577888887653

>KOG2066|consensus

Probab=98.44  E-value=1.6e-05  Score=78.13  Aligned_cols=189  Identities=9%  Similarity=0.024  Sum_probs=129.5

Q ss_pred             ccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee
Q psy17682        215 QRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEE  294 (490)
Q Consensus       215 ~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  294 (490)
                      ...++|++++.   ..|+-|+.+|.|++++.. +.+ .+...|...      .-+|.++++|+.||++.|-.+-+.+...
T Consensus        39 ~D~is~~av~~---~~~~~GtH~g~v~~~~~~-~~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~  107 (846)
T KOG2066|consen   39 NDAISCCAVHD---KFFALGTHRGAVYLTTCQ-GNP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEIT  107 (846)
T ss_pred             hhHHHHHHhhc---ceeeeccccceEEEEecC-Ccc-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccce
Confidence            34566766663   489999999999999975 444 333335443      5689999999999999999999888776


Q ss_pred             eeeecCCCceeEEEEeCC-----CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecC
Q psy17682        295 EAVCHEGSKATRAIYLKS-----GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKG  369 (490)
Q Consensus       295 ~~~~~~~~~~~~~~~s~~-----~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~  369 (490)
                      ++.-+.  ++.+++++|+     .+.+++|+   .-| +.++.-+-.............+.|.++.|.  |+++ |-++.
T Consensus       108 ~~df~r--piksial~Pd~~~~~sk~fv~GG---~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lI-AWand  178 (846)
T KOG2066|consen  108 QYDFKR--PIKSIALHPDFSRQQSKQFVSGG---MAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLI-AWAND  178 (846)
T ss_pred             eEecCC--cceeEEeccchhhhhhhheeecC---cce-EEEehhhhhcCccceeeecCccceEEEEec--CcEE-EEecC
Confidence            665443  4889999998     55777776   344 777654433322233333455779999885  6677 55555


Q ss_pred             CCeEEEEEecCCCCeeEEeeee---eCCCceeeEEEeeCceeEEeecceeEEEEecCC
Q psy17682        370 DSVIRYFEITAEPPFVHYINTF---QTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNS  424 (490)
Q Consensus       370 dg~i~iwd~~~~~~~~~~~~~~---~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~  424 (490)
                      +| |+|||+.+.+.+...-...   .....-..+.|.++..+++.-++.+++..+..+
T Consensus       179 ~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVIGW~d~v~i~~I~~~  235 (846)
T KOG2066|consen  179 DG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVIGWGDSVKICSIKKR  235 (846)
T ss_pred             CC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEEEecCCeEEEEEEecc
Confidence            55 9999999887332111111   111234678999999988888999999888743

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=98.37  E-value=0.00023  Score=68.18  Aligned_cols=230  Identities=10%  Similarity=0.089  Sum_probs=150.8

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe--CCCcEEEEE
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG--SDNNVAIWN  244 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~--~dg~v~iwd  244 (490)
                      .-.+++.++.+.+..+....++.|.+.|..+.........        ......++++|+++.+.++-.  .++++.+.|
T Consensus        75 ~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~v--------G~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid  146 (381)
T COG3391          75 YPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPV--------GLGPVGLAVDPDGKYVYVANAGNGNNTVSVID  146 (381)
T ss_pred             cccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeee--------ccCCceEEECCCCCEEEEEecccCCceEEEEe
Confidence            3456788888855777777778999999777666554331        225678999999975555555  368999999


Q ss_pred             CCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceee-ee--eecCCCceeEEEEeCCCcEEEEEe
Q psy17682        245 VGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KDKKMRIINPRTGAIEE-EA--VCHEGSKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       245 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~-~~--~~~~~~~~~~~~~s~~~~~l~~~~  320 (490)
                      ..+.+.+........+ ..++++|+|+.+.... .++.|.+.|........ .-  ..........+.++|+|..+.+..
T Consensus       147 ~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~  225 (381)
T COG3391         147 AATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVAN  225 (381)
T ss_pred             CCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEe
Confidence            9988888875533344 8999999999666655 78999999977665553 10  011222367889999998766655


Q ss_pred             CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeE
Q psy17682        321 SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGI  400 (490)
Q Consensus       321 ~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~  400 (490)
                      ....++.+...|..+............. ....+..+|+|+.+++.-+..+.+.+-|..+................+..+
T Consensus       226 ~~~~~~~v~~id~~~~~v~~~~~~~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~  304 (381)
T COG3391         226 DGSGSNNVLKIDTATGNVTATDLPVGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSI  304 (381)
T ss_pred             ccCCCceEEEEeCCCceEEEeccccccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccccccccceec
Confidence            3222368888888765421111111222 456788999999998776667889999988865221111111122335666


Q ss_pred             EEeeCc
Q psy17682        401 GMMPKR  406 (490)
Q Consensus       401 ~~sp~~  406 (490)
                      ++.+..
T Consensus       305 ~~~~~~  310 (381)
T COG3391         305 AISPLY  310 (381)
T ss_pred             cceeec
Confidence            666654

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.35  E-value=0.003  Score=61.15  Aligned_cols=223  Identities=12%  Similarity=0.107  Sum_probs=124.9

Q ss_pred             EEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeE-EEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccc
Q psy17682        129 EIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLD-IAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEP  207 (490)
Q Consensus       129 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~-~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  207 (490)
                      .+..+..+|.+..++..     +++..-.... .   +.+.+ ....  + ..++.+..++.+..+|.++|+.+......
T Consensus       122 ~v~v~~~~g~l~ald~~-----tG~~~W~~~~-~---~~~~ssP~v~--~-~~v~v~~~~g~l~ald~~tG~~~W~~~~~  189 (394)
T PRK11138        122 KVYIGSEKGQVYALNAE-----DGEVAWQTKV-A---GEALSRPVVS--D-GLVLVHTSNGMLQALNESDGAVKWTVNLD  189 (394)
T ss_pred             EEEEEcCCCEEEEEECC-----CCCCcccccC-C---CceecCCEEE--C-CEEEEECCCCEEEEEEccCCCEeeeecCC
Confidence            34556678888888873     3433222211 1   11211 1122  3 46677788899999999999887665421


Q ss_pred             e--eeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCC-------cEEEEEEcC--CCCEEEEE
Q psy17682        208 V--VDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPD-------IVYSASWNW--DGSKLLTT  276 (490)
Q Consensus       208 ~--~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-------~v~~~~~~~--~~~~l~~~  276 (490)
                      .  ....+...++    .. ++  .++.++.+|.+..+|..+|+.+........       ....+.-+|  .+..++.+
T Consensus       190 ~~~~~~~~~~sP~----v~-~~--~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~  262 (394)
T PRK11138        190 VPSLTLRGESAPA----TA-FG--GAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYAL  262 (394)
T ss_pred             CCcccccCCCCCE----EE-CC--EEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEE
Confidence            0  0011111121    11 22  466677889999999999987766531110       011111223  35567777


Q ss_pred             eCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeee
Q psy17682        277 CKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLY  356 (490)
Q Consensus       277 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~  356 (490)
                      +.+|.+..+|..+++.+......  . ...+.. .++.+++ ++   .++.+...|..+++.......... ....+...
T Consensus       263 ~~~g~l~ald~~tG~~~W~~~~~--~-~~~~~~-~~~~vy~-~~---~~g~l~ald~~tG~~~W~~~~~~~-~~~~sp~v  333 (394)
T PRK11138        263 AYNGNLVALDLRSGQIVWKREYG--S-VNDFAV-DGGRIYL-VD---QNDRVYALDTRGGVELWSQSDLLH-RLLTAPVL  333 (394)
T ss_pred             EcCCeEEEEECCCCCEEEeecCC--C-ccCcEE-ECCEEEE-Ec---CCCeEEEEECCCCcEEEcccccCC-CcccCCEE
Confidence            88999999999999877655421  1 111222 2344444 44   478888888887653221111111 11222222


Q ss_pred             cCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        357 DPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       357 s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                        .+..| +.++.||.+.+.|..+++
T Consensus       334 --~~g~l-~v~~~~G~l~~ld~~tG~  356 (394)
T PRK11138        334 --YNGYL-VVGDSEGYLHWINREDGR  356 (394)
T ss_pred             --ECCEE-EEEeCCCEEEEEECCCCC
Confidence              24556 457789999999999987

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.35  E-value=3.8e-05  Score=75.19  Aligned_cols=188  Identities=11%  Similarity=0.060  Sum_probs=112.1

Q ss_pred             ECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC----CcEEEEECCCC
Q psy17682        173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD----NNVAIWNVGTG  248 (490)
Q Consensus       173 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d----g~v~iwd~~~~  248 (490)
                      +.|+|..+..+.-..+.+.+.|.++.+....+.        -.+....+.++|+++ ++++.+.+    .++..-+..+.
T Consensus       200 lpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~--------Vdgnpd~v~~spdGk-~afvTsyNsE~G~tl~em~a~e~  270 (635)
T PRK02888        200 LPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVM--------VDGNLDNVDTDYDGK-YAFSTCYNSEEGVTLAEMMAAER  270 (635)
T ss_pred             cCCCCCEeecccceeEEEEEEECccceEEEEEE--------eCCCcccceECCCCC-EEEEeccCcccCcceeeeccccC
Confidence            344552222233334566677776655443322        123456778899986 55555422    23333333222


Q ss_pred             eeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-----CceeeeeeecCCCceeEEEEeCCCcEEEEEeCCC
Q psy17682        249 EIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRT-----GAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKM  323 (490)
Q Consensus       249 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~  323 (490)
                      ..+..+....  +  .++.++|++...  .++.|.+.|.++     .+.+..+....  ....+.++|||+++++++.  
T Consensus       271 d~~vvfni~~--i--ea~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPVGK--sPHGV~vSPDGkylyVank--  340 (635)
T PRK02888        271 DWVVVFNIAR--I--EEAVKAGKFKTI--GGSKVPVVDGRKAANAGSALTRYVPVPK--NPHGVNTSPDGKYFIANGK--  340 (635)
T ss_pred             ceEEEEchHH--H--HHhhhCCCEEEE--CCCEEEEEECCccccCCcceEEEEECCC--CccceEECCCCCEEEEeCC--
Confidence            2222221100  0  133457776665  367899999998     34455454333  3889999999999887763  


Q ss_pred             ceeEEEEecCCCCCCCe---------EEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        324 SERQYSLRAPDHLDEPI---------VMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       324 ~~~~i~iwd~~~~~~~~---------~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      .+.++.+.|+.+.....         ...+.....+-...+|+++|+ .|.+--.|..|..|++..
T Consensus       341 lS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~-aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        341 LSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPLHTAFDGRGN-AYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             CCCcEEEEEChhhhhhhhccCCccceEEEeeccCCCcceEEECCCCC-EEEeEeecceeEEEehHH
Confidence            57899999998755311         122223344567789999987 457888899999999986

>KOG3617|consensus

Probab=98.33  E-value=9.2e-05  Score=73.24  Aligned_cols=315  Identities=13%  Similarity=0.150  Sum_probs=165.7

Q ss_pred             ceeeeEEeccCCCceEEeeeC----CCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecc
Q psy17682         45 RRVGLVLWHPTAQNVLLTAGK----EAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISE  120 (490)
Q Consensus        45 ~~V~~v~~~p~~~~~l~s~~~----D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  120 (490)
                      +.-+-+.|+|.. .+|+.++-    .|+|.|+- .+|+...              .+          ...-.+.+++|+|
T Consensus        16 avsti~SWHPse-PlfAVA~fS~er~GSVtIfa-dtGEPqr--------------~V----------t~P~hatSLCWHp   69 (1416)
T KOG3617|consen   16 AVSTISSWHPSE-PLFAVASFSPERGGSVTIFA-DTGEPQR--------------DV----------TYPVHATSLCWHP   69 (1416)
T ss_pred             ccccccccCCCC-ceeEEEEecCCCCceEEEEe-cCCCCCc--------------cc----------ccceehhhhccCh
Confidence            344556799988 67766653    47888873 3333111              11          1112456789998


Q ss_pred             ccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCc
Q psy17682        121 DYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGI  200 (490)
Q Consensus       121 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~  200 (490)
                      ..     .+++.+-.-|.+.+|...        ..+.......|..+|..+.|+|+| +.++|+..=|.+.+|.......
T Consensus        70 e~-----~vLa~gwe~g~~~v~~~~--------~~e~htv~~th~a~i~~l~wS~~G-~~l~t~d~~g~v~lwr~d~~g~  135 (1416)
T KOG3617|consen   70 EE-----FVLAQGWEMGVSDVQKTN--------TTETHTVVETHPAPIQGLDWSHDG-TVLMTLDNPGSVHLWRYDVIGE  135 (1416)
T ss_pred             HH-----HHHhhccccceeEEEecC--------CceeeeeccCCCCCceeEEecCCC-CeEEEcCCCceeEEEEeeeccc
Confidence            84     456667778889999764        112233446799999999999999 8999999999999998764333


Q ss_pred             ccccccceeeecccc--cC--EEEEEEeeCCCC-----EEEEEeCCCcEE-EEECCCCeeEEEEecCCCcEEEEEEcCCC
Q psy17682        201 SRTLTEPVVDLLYHQ--RR--VGLVLWHPTAQN-----VLLTAGSDNNVA-IWNVGTGEIMIQIECHPDIVYSASWNWDG  270 (490)
Q Consensus       201 ~~~~~~~~~~~~~~~--~~--v~~~~~~p~~~~-----~l~s~~~dg~v~-iwd~~~~~~~~~~~~~~~~v~~~~~~~~~  270 (490)
                      +...+     +..|.  ..  ..|...+++++.     ..++.+.+..+- .++.+....-.... |.+       .|+|
T Consensus       136 ~q~~~-----~~~hel~~~ltl~cfRL~~~~Ee~~~laKaaVtgDe~alD~~fnwk~~~a~rs~~-ksg-------v~~g  202 (1416)
T KOG3617|consen  136 IQTSN-----IMQHELNDQLTLWCFRLSYDREEKFKLAKAAVTGDESALDEPFNWKESLAERSDE-KSG-------VPKG  202 (1416)
T ss_pred             cccch-----hhhhHhhceeeEEEEecCCChHHhhhhhhhhccCchhhhcccccCccchhhcccc-ccC-------CCCC
Confidence            22211     11122  22  344444555321     123333333332 33332111111111 221       4678


Q ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeeeecC----------CCceeEEEEeCCCcEEEE--------------EeCCCcee
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHE----------GSKATRAIYLKSGLIFTT--------------GFSKMSER  326 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~s~~~~~l~~--------------~~~~~~~~  326 (490)
                      ..++.++.+|+|+..|-. +++....+..+          ...+..+.+..+..+++-              |--.+..|
T Consensus       203 ~~F~~~~~~GtVyyvdq~-g~~~~V~k~dS~vQmLf~~~~eai~~i~e~lr~~l~~v~~~G~~ee~~~vk~sgk~GgrqG  281 (1416)
T KOG3617|consen  203 TEFLFAGKSGTVYYVDQN-GRQRTVHKLDSEVQMLFMGYCEAISIIIEFLRDCLIFVLAKGTSEERCAVKVSGKLGGRQG  281 (1416)
T ss_pred             cEEEEEcCCceEEEEcCC-CcEEEEEEccchHHHHHhcccceEEEEeeeceeeEEEecCCCchHHhhhhhhccccCCccC
Confidence            888889999999988844 33332222111          111111111111111111              00000111


Q ss_pred             EEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC----CCeeE--Eee-eeeCCCceee
Q psy17682        327 QYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE----PPFVH--YIN-TFQTPDPQRG  399 (490)
Q Consensus       327 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~----~~~~~--~~~-~~~~~~~i~~  399 (490)
                      .+.+-....--.+...........+.+++++..+..| ..|...|.+.+|--...    .|...  .+. .....+.|+.
T Consensus       282 giA~sEssGvLr~~eKyg~e~ge~~~c~cY~~~~~~l-~agt~~gnv~~w~~v~~~f~g~p~~d~w~l~~~~e~~g~I~~  360 (1416)
T KOG3617|consen  282 GIACSESSGVLRKSEKYGLELGEGILCMCYGEKEIRL-WAGTKEGNVTIWLDVNKGFQGDPTIDVWTLNGKRESLGKISL  360 (1416)
T ss_pred             ccccccccccccCCcchhhhcCCceEEEEEeccceEE-EecccCCcEEEeeecCccccCCCCcceEEecCchhhccceEE
Confidence            1111110000000011112234578999999998888 77888999999964332    22111  111 1122357999


Q ss_pred             EEEeeCceeEEeecc
Q psy17682        400 IGMMPKRGCDVNSCE  414 (490)
Q Consensus       400 ~~~sp~~~~l~~~~~  414 (490)
                      +.|.|-..+++..+.
T Consensus       361 i~Wg~~k~~~avn~~  375 (1416)
T KOG3617|consen  361 IRWGPIKSTAAVNTE  375 (1416)
T ss_pred             EEeccccchhhhhhh
Confidence            999997766555544

>KOG2114|consensus

Probab=98.32  E-value=0.00017  Score=71.73  Aligned_cols=195  Identities=13%  Similarity=0.131  Sum_probs=124.4

Q ss_pred             EECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC-----cEEEEECC
Q psy17682        172 AWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN-----NVAIWNVG  246 (490)
Q Consensus       172 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-----~v~iwd~~  246 (490)
                      +|++.+ ..++.|+.+|.|.+.+- .-+..+.       +..+...+...-+.-++.++|++.+.|+     .++||+++
T Consensus        30 c~~s~~-~~vvigt~~G~V~~Ln~-s~~~~~~-------fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~le  100 (933)
T KOG2114|consen   30 CCSSST-GSVVIGTADGRVVILNS-SFQLIRG-------FQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLE  100 (933)
T ss_pred             EEcCCC-ceEEEeeccccEEEecc-cceeeeh-------heecchhhhhHhhcccCceEEEEEeecCCCCceEEEEeccc
Confidence            355555 68999999999888773 2222233       3335555333334445556888887775     48999986


Q ss_pred             CC------eeEE--EEec-----CCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC---CCceeeeeeecCCCceeEEEEe
Q psy17682        247 TG------EIMI--QIEC-----HPDIVYSASWNWDGSKLLTTCKDKKMRIINPR---TGAIEEEAVCHEGSKATRAIYL  310 (490)
Q Consensus       247 ~~------~~~~--~~~~-----~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~s  310 (490)
                      .-      +++.  .+..     ...++.+++.+.+-+.+|+|-.+|.|..+.-.   .......+......+|+.+++.
T Consensus       101 k~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~  180 (933)
T KOG2114|consen  101 KVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALR  180 (933)
T ss_pred             ccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEe
Confidence            32      2331  1112     35678899999998999999999999988532   1111222233344569999999


Q ss_pred             CCCcE-EEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        311 KSGLI-FTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       311 ~~~~~-l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      .++.. +.+++    ...|.+|.+.... |.....-.+..+..+..|++....+++++  +..+.+|+....+
T Consensus       181 ~d~~s~lFv~T----t~~V~~y~l~gr~-p~~~~ld~~G~~lnCss~~~~t~qfIca~--~e~l~fY~sd~~~  246 (933)
T KOG2114|consen  181 SDGKSVLFVAT----TEQVMLYSLSGRT-PSLKVLDNNGISLNCSSFSDGTYQFICAG--SEFLYFYDSDGRG  246 (933)
T ss_pred             cCCceeEEEEe----cceeEEEEecCCC-cceeeeccCCccceeeecCCCCccEEEec--CceEEEEcCCCcc
Confidence            88876 33332    5678899888544 44433334555678888887666452433  5669999988655

>KOG0882|consensus

Probab=98.31  E-value=5.1e-06  Score=75.96  Aligned_cols=212  Identities=10%  Similarity=0.058  Sum_probs=147.4

Q ss_pred             cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC--C-eeEEEEecCCCcEEEEEEcCCCCEEEEEeC-CCeEEEEeCCC
Q psy17682        214 HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT--G-EIMIQIECHPDIVYSASWNWDGSKLLTTCK-DKKMRIINPRT  289 (490)
Q Consensus       214 ~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~--~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~  289 (490)
                      |...|+.+.....  .++.+++.||.++.|.-..  + +.+..+..|...+.+++.+.++.++.+.+. |..++++|+.+
T Consensus         8 hrd~i~hv~~tka--~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn   85 (558)
T KOG0882|consen    8 HRDVITHVFPTKA--KFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVEN   85 (558)
T ss_pred             ccceeeeEeeehh--heEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeec
Confidence            8888888765544  4899999999999998543  1 344556678888999999999999999777 99999999987


Q ss_pred             CceeeeeeecCCCceeEEEEeCCC--cEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEe
Q psy17682        290 GAIEEEAVCHEGSKATRAIYLKSG--LIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCG  367 (490)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~s~~~--~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g  367 (490)
                      -..+..++...-+.......++..  ..++++..  .++.+.++|-....++.....--|..+|..+.+.+-+..+ ++.
T Consensus        86 ~DminmiKL~~lPg~a~wv~skGd~~s~IAVs~~--~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~-vSi  162 (558)
T KOG0882|consen   86 FDMINMIKLVDLPGFAEWVTSKGDKISLIAVSLF--KSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSA-VSI  162 (558)
T ss_pred             cchhhhcccccCCCceEEecCCCCeeeeEEeecc--cCCCcEEECCcCCcCccceecccccCceEEEEeeccccce-eec
Confidence            765544432221112222233321  24444432  5788999999887777666666677899999999999887 788


Q ss_pred             cCCCeEEEEEecCCCCeeE--Eee----------eeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCCceEEE
Q psy17682        368 KGDSVIRYFEITAEPPFVH--YIN----------TFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSGLCQVV  430 (490)
Q Consensus       368 ~~dg~i~iwd~~~~~~~~~--~~~----------~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~~~~~i  430 (490)
                      ...|.|.-|.....-++.+  ...          ..+......++.|+|++..+..-  +..+|++.+.++.+++.+
T Consensus       163 D~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqei  239 (558)
T KOG0882|consen  163 DISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEI  239 (558)
T ss_pred             cccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhh
Confidence            8889999999874100000  111          11223457899999999776554  447788888888755544

>KOG2114|consensus

Probab=98.30  E-value=9.5e-05  Score=73.38  Aligned_cols=196  Identities=11%  Similarity=0.049  Sum_probs=130.7

Q ss_pred             EEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCc-EEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCC-----
Q psy17682        222 LWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDI-VYSASWNWDGSKLLTTCKDK-----KMRIINPRTG-----  290 (490)
Q Consensus       222 ~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~-----  290 (490)
                      +|++.+. .++.|+.+|.|.+.+- +-+.+..++.+... |..+....+..+|++.+.|+     .++|||+..-     
T Consensus        30 c~~s~~~-~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~s  107 (933)
T KOG2114|consen   30 CCSSSTG-SVVIGTADGRVVILNS-SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNS  107 (933)
T ss_pred             EEcCCCc-eEEEeeccccEEEecc-cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCC
Confidence            3566665 8999999999988873 44555777777666 44444433446788877664     4999999643     


Q ss_pred             -ceeeeee--e----cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC--CeEEEeccCCCceeeeeecCCCC
Q psy17682        291 -AIEEEAV--C----HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE--PIVMVELDTSNGVMFPLYDPDTN  361 (490)
Q Consensus       291 -~~~~~~~--~----~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~--~~~~~~~~~~~~i~~~~~s~~~~  361 (490)
                       .++.+..  .    ....++++++.+.+-+.+|+|.   .+|.|..+.-+-.+.  ...........+|+.+++..+++
T Consensus       108 P~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf---~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~  184 (933)
T KOG2114|consen  108 PQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGF---TNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGK  184 (933)
T ss_pred             cceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEe---cCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCc
Confidence             2331111  1    1244688999999999999998   688888875432111  11222334556799999999998


Q ss_pred             eEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce-eEEeecceeEEEEecCCC
Q psy17682        362 LVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG-CDVNSCEIGRFFRLNNSG  425 (490)
Q Consensus       362 ~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~~~~~~~~~  425 (490)
                      .++.+. .-..|.+|.+....|....+.  .++.++++..|++... +++++++.+.+|+....+
T Consensus       185 s~lFv~-Tt~~V~~y~l~gr~p~~~~ld--~~G~~lnCss~~~~t~qfIca~~e~l~fY~sd~~~  246 (933)
T KOG2114|consen  185 SVLFVA-TTEQVMLYSLSGRTPSLKVLD--NNGISLNCSSFSDGTYQFICAGSEFLYFYDSDGRG  246 (933)
T ss_pred             eeEEEE-ecceeEEEEecCCCcceeeec--cCCccceeeecCCCCccEEEecCceEEEEcCCCcc
Confidence            732333 245699999995442222232  3456788999997655 888889999999988766

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.28  E-value=0.0007  Score=59.81  Aligned_cols=206  Identities=10%  Similarity=0.068  Sum_probs=112.9

Q ss_pred             ecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecC-CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy17682        211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH-PDIVYSASWNWDGSKLLTTCKDKKMRIINPRT  289 (490)
Q Consensus       211 ~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~  289 (490)
                      +.+-...+.+++|+|+...++++....+.|..++. +|+.+.++.-. .+..-.+++..++.++++.-.++.+.++++..
T Consensus        17 l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~   95 (248)
T PF06977_consen   17 LPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDD   95 (248)
T ss_dssp             -TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE--
T ss_pred             CCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEec
Confidence            44455569999999987668888888899988886 57888877632 35688899987777777666689999999843


Q ss_pred             Cc----e--eeeee--e--cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEE-ec------cCCCcee
Q psy17682        290 GA----I--EEEAV--C--HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMV-EL------DTSNGVM  352 (490)
Q Consensus       290 ~~----~--~~~~~--~--~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~-~~------~~~~~i~  352 (490)
                      ..    .  ...+.  .  ..+.-+-.++|++.+..|.++-++ .-..|.-++........... ..      .....+.
T Consensus        96 ~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~-~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S  174 (248)
T PF06977_consen   96 DTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKER-KPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLS  174 (248)
T ss_dssp             --TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEES-SSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---
T ss_pred             cccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCC-CChhhEEEccccCccceeeccccccccccceecccc
Confidence            21    1  11222  1  122237899999986666555532 12233333331111111111 10      1223478


Q ss_pred             eeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeC-------CCceeeEEEeeCceeEEeecceeEEEEe
Q psy17682        353 FPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQT-------PDPQRGIGMMPKRGCDVNSCEIGRFFRL  421 (490)
Q Consensus       353 ~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~-------~~~i~~~~~sp~~~~l~~~~~~~~~~~~  421 (490)
                      .+.++|....|++.+..+..|..+| .++++ ...+.....       -...-+|+|.++|.+.+++..+ .+|.+
T Consensus       175 ~l~~~p~t~~lliLS~es~~l~~~d-~~G~~-~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEpN-lfy~f  247 (248)
T PF06977_consen  175 GLSYDPRTGHLLILSDESRLLLELD-RQGRV-VSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEPN-LFYRF  247 (248)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEE--TT--E-EEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETTT-EEEEE
T ss_pred             ceEEcCCCCeEEEEECCCCeEEEEC-CCCCE-EEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCCc-eEEEe
Confidence            8999998888878888899999999 55552 222221110       0236789999999887777544 55543

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.27  E-value=4.3e-05  Score=73.02  Aligned_cols=124  Identities=14%  Similarity=0.212  Sum_probs=87.0

Q ss_pred             CCeeEEEECCCCCCEEEEE----eCCCc----EEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        166 GPVLDIAWSPHDDNVIASG----SEDCV----VKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~----~~dg~----i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      ....++.|+-..++.+.+.    +.+|.    -++|++..++..+.   ....+ .....|.+++++|+.+ .++.|+.|
T Consensus       206 ~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrv---svtsi-pL~s~v~~ca~sp~E~-kLvlGC~D  280 (545)
T PF11768_consen  206 NDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRV---SVTSI-PLPSQVICCARSPSED-KLVLGCED  280 (545)
T ss_pred             CCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEE---EEEEE-ecCCcceEEecCcccc-eEEEEecC
Confidence            3446677776555666654    33343    35677765543221   11222 3778899999999986 89999999


Q ss_pred             CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeee
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEA  296 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  296 (490)
                      |.|.+||...+...  +....-..+.++|+|+|..+++|+..|.+.+||+.-......+
T Consensus       281 gSiiLyD~~~~~t~--~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALspi~~qL  337 (545)
T PF11768_consen  281 GSIILYDTTRGVTL--LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSPIKMQL  337 (545)
T ss_pred             CeEEEEEcCCCeee--eeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecCccceee
Confidence            99999998766332  2224556789999999999999999999999999765443333

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.26  E-value=0.00056  Score=65.15  Aligned_cols=284  Identities=12%  Similarity=0.095  Sum_probs=138.2

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccc-------------------------ccc-----------cceee
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISR-------------------------TLT-----------EPVVD  210 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~-------------------------~~~-----------~~~~~  210 (490)
                      .|+.+.|.++. .-|++|...|.|-||....++.-.                         .+.           .|...
T Consensus         3 ~v~~vs~a~~t-~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l   81 (395)
T PF08596_consen    3 SVTHVSFAPET-LELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTL   81 (395)
T ss_dssp             -EEEEEEETTT-TEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEE
T ss_pred             eEEEEEecCCC-ceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhh
Confidence            58889999876 689999999999999765332211                         000           22333


Q ss_pred             ecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe--c------CCCcEEEEEEcC-----CC---CEEE
Q psy17682        211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE--C------HPDIVYSASWNW-----DG---SKLL  274 (490)
Q Consensus       211 ~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~------~~~~v~~~~~~~-----~~---~~l~  274 (490)
                      +....++|++++.+.-|  +++.|..+|.+.|.|+|....+..-.  .      ....++++.|..     |+   -.++
T Consensus        82 ~~~~~g~vtal~~S~iG--Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~  159 (395)
T PF08596_consen   82 LDAKQGPVTALKNSDIG--FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLL  159 (395)
T ss_dssp             E---S-SEEEEEE-BTS--EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEE
T ss_pred             eeccCCcEeEEecCCCc--EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEE
Confidence            44457889999998776  89999999999999999887776532  2      234577888863     33   3788


Q ss_pred             EEeCCCeEEEEeCC-C--Cceeeee----eecCCCceeEEE-EeCC---------------------CcEEEEEeCCCce
Q psy17682        275 TTCKDKKMRIINPR-T--GAIEEEA----VCHEGSKATRAI-YLKS---------------------GLIFTTGFSKMSE  325 (490)
Q Consensus       275 ~~~~dg~i~iwd~~-~--~~~~~~~----~~~~~~~~~~~~-~s~~---------------------~~~l~~~~~~~~~  325 (490)
                      +|+..|.+.+|.+- .  +.-...+    ..+.+. +..+. ++.+                     ..++++++    +
T Consensus       160 vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~-i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvS----e  234 (395)
T PF08596_consen  160 VGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSP-ILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVS----E  234 (395)
T ss_dssp             EEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS-----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-----S
T ss_pred             EEeCCCCEEEEEEecCCCCceEEEEeeccccCCCc-eEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEc----c
Confidence            99999999999774 1  1111111    122333 33332 4221                     12444453    6


Q ss_pred             eEEEEecCCCCCCCeEEEeccCCCceeeeeec----CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee-eCCCceeeE
Q psy17682        326 RQYSLRAPDHLDEPIVMVELDTSNGVMFPLYD----PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF-QTPDPQRGI  400 (490)
Q Consensus       326 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s----~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~i~~~  400 (490)
                      ..++++...+.+..  .+.+........+.+-    ..+...+++-..+|.|++|.+..-+++...-... .....+...
T Consensus       235 ~~irv~~~~~~k~~--~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~s  312 (395)
T PF08596_consen  235 SDIRVFKPPKSKGA--HKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSS  312 (395)
T ss_dssp             SEEEEE-TT---EE--EEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-
T ss_pred             cceEEEeCCCCccc--ceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcccccccccc
Confidence            78899888765532  2222221222333442    1233334677889999999999877432222111 111235677


Q ss_pred             EEeeCceeEEee-cceeEEEEecCCCceEEEEEEEeCCCcCcccCCCCCCCCCCCccchhhhcCC
Q psy17682        401 GMMPKRGCDVNS-CEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTVGDTAALTADEWFAG  464 (490)
Q Consensus       401 ~~sp~~~~l~~~-~~~~~~~~~~~~~~~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  464 (490)
                      .++++|..++-. ...+.++.+....... -....+....+|...+..   ...|..+..+|+.|
T Consensus       313 sis~~Gdi~~~~gpsE~~l~sv~~~~~~~-~~~~~~~~d~L~np~~~i---p~rP~~s~lqW~~G  373 (395)
T PF08596_consen  313 SISRNGDIFYWTGPSEIQLFSVWGEGRTG-SSLLAPPTDTLYNPNLII---PPRPTISNLQWASG  373 (395)
T ss_dssp             EE-TTS-EEEE-SSSEEEEEEEES---------------B---TT-------------TTTS-SS
T ss_pred             EECCCCCEEEEeCcccEEEEEEEccCCcc-ccccCCCCCeEECCCCCC---CCcCccchhHhhcc
Confidence            889999876544 3355666655544110 000112223344433322   23555777799988

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG4649|consensus

Probab=98.20  E-value=0.00091  Score=57.37  Aligned_cols=136  Identities=13%  Similarity=0.184  Sum_probs=96.2

Q ss_pred             CCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEE
Q psy17682        174 SPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQ  253 (490)
Q Consensus       174 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~  253 (490)
                      .++...+++.|+..+.+.--|..+|+......        -..++.+-+.- -| ++++.|...|.+++.+.++|+.+..
T Consensus        19 ~~dskT~v~igSHs~~~~avd~~sG~~~We~i--------lg~RiE~sa~v-vg-dfVV~GCy~g~lYfl~~~tGs~~w~   88 (354)
T KOG4649|consen   19 CNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAI--------LGVRIECSAIV-VG-DFVVLGCYSGGLYFLCVKTGSQIWN   88 (354)
T ss_pred             ecCCceEEEEecCCceEEEecCCCCcEEeehh--------hCceeeeeeEE-EC-CEEEEEEccCcEEEEEecchhheee
Confidence            34445788889999999888988887655321        23344433333 24 3799999999999999999988887


Q ss_pred             EecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeC-CCcEEEEEe
Q psy17682        254 IECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLK-SGLIFTTGF  320 (490)
Q Consensus       254 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~~~  320 (490)
                      +.....--......+++..+..|+.|++.+..|.++..++...+...+. ..+-+..| ++.++++..
T Consensus        89 f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~-f~sP~i~~g~~sly~a~t  155 (354)
T KOG4649|consen   89 FVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGT-FVSPVIAPGDGSLYAAIT  155 (354)
T ss_pred             eeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCce-eccceecCCCceEEEEec
Confidence            7743322223456778999999999999999999999998887654432 44555566 555555443

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.19  E-value=0.0011  Score=63.13  Aligned_cols=259  Identities=17%  Similarity=0.179  Sum_probs=136.6

Q ss_pred             CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccce--eeecc
Q psy17682        136 QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPV--VDLLY  213 (490)
Q Consensus       136 ~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~  213 (490)
                      .+.+.++++.     +++    ...+......+....|+|+| +.++-.. ++.|.+++..++...+ +....  ....|
T Consensus        22 ~~~y~i~d~~-----~~~----~~~l~~~~~~~~~~~~sP~g-~~~~~v~-~~nly~~~~~~~~~~~-lT~dg~~~i~nG   89 (353)
T PF00930_consen   22 KGDYYIYDIE-----TGE----ITPLTPPPPKLQDAKWSPDG-KYIAFVR-DNNLYLRDLATGQETQ-LTTDGEPGIYNG   89 (353)
T ss_dssp             EEEEEEEETT-----TTE----EEESS-EETTBSEEEE-SSS-TEEEEEE-TTEEEEESSTTSEEEE-SES--TTTEEES
T ss_pred             ceeEEEEecC-----CCc----eEECcCCccccccceeecCC-CeeEEEe-cCceEEEECCCCCeEE-eccccceeEEcC
Confidence            4567788875     222    11222226788899999998 6666665 5689999887664322 21100  00000


Q ss_pred             c---------ccCEEEEEEeeCCCCEEEEEe-CCCc-----------------------------------EEEEECCCC
Q psy17682        214 H---------QRRVGLVLWHPTAQNVLLTAG-SDNN-----------------------------------VAIWNVGTG  248 (490)
Q Consensus       214 ~---------~~~v~~~~~~p~~~~~l~s~~-~dg~-----------------------------------v~iwd~~~~  248 (490)
                      -         -+.-..+-|+|+++ .|+... .+..                                   +.|+|+.++
T Consensus        90 ~~dwvyeEEv~~~~~~~~WSpd~~-~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~  168 (353)
T PF00930_consen   90 VPDWVYEEEVFDRRSAVWWSPDSK-YLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASG  168 (353)
T ss_dssp             B--HHHHHHTSSSSBSEEE-TTSS-EEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSST
T ss_pred             ccceeccccccccccceEECCCCC-EEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCC
Confidence            0         11235688999997 555432 2232                                   233455444


Q ss_pred             eeEE-EE----ecCCCcEEEEEEcCCCCEEEEEe--CC---CeEEEEeCCCCceeeeeeecCCC---ceeEEEEe-CCCc
Q psy17682        249 EIMI-QI----ECHPDIVYSASWNWDGSKLLTTC--KD---KKMRIINPRTGAIEEEAVCHEGS---KATRAIYL-KSGL  314 (490)
Q Consensus       249 ~~~~-~~----~~~~~~v~~~~~~~~~~~l~~~~--~d---g~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~s-~~~~  314 (490)
                      +... ..    ......+..+.|.++++.|+..-  ++   ..+.++|..++............   ......+. +++.
T Consensus       169 ~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~  248 (353)
T PF00930_consen  169 KTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGN  248 (353)
T ss_dssp             CCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSS
T ss_pred             cEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCC
Confidence            3321 11    12234577899999988444443  22   24777888877654444322221   12345554 6655


Q ss_pred             EEEEEeCCCceeEEEEecCCCCCCCeEEEec-cCCCcee-eeeecCCCCeEEEEecCCC--eEEEEEecCC-CCeeEEee
Q psy17682        315 IFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-DTSNGVM-FPLYDPDTNLVYLCGKGDS--VIRYFEITAE-PPFVHYIN  389 (490)
Q Consensus       315 ~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-~~~~~i~-~~~~s~~~~~l~~~g~~dg--~i~iwd~~~~-~~~~~~~~  389 (490)
                      .++..+....-..|.+++.....    ...+ ...-.|. .+.++++++.|+.++..++  .-.+|.+... ..-.+.+ 
T Consensus       249 ~~l~~s~~~G~~hly~~~~~~~~----~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~L-  323 (353)
T PF00930_consen  249 EFLWISERDGYRHLYLYDLDGGK----PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCL-  323 (353)
T ss_dssp             EEEEEEETTSSEEEEEEETTSSE----EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEES-
T ss_pred             EEEEEEEcCCCcEEEEEcccccc----eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEec-
Confidence            44444433235667777777653    1222 2223353 4788999999988887643  4455555443 2222333 


Q ss_pred             eeeCCCce-eeEEEeeCceeEEeecc
Q psy17682        390 TFQTPDPQ-RGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       390 ~~~~~~~i-~~~~~sp~~~~l~~~~~  414 (490)
                        ...... ..+.|||++++++..+.
T Consensus       324 --T~~~~~~~~~~~Spdg~y~v~~~s  347 (353)
T PF00930_consen  324 --TCEDGDHYSASFSPDGKYYVDTYS  347 (353)
T ss_dssp             --STTSSTTEEEEE-TTSSEEEEEEE
T ss_pred             --cCCCCCceEEEECCCCCEEEEEEc
Confidence              332233 59999999998876543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.18  E-value=0.00037  Score=68.49  Aligned_cols=156  Identities=6%  Similarity=-0.067  Sum_probs=98.1

Q ss_pred             EcCCCCEEEEEe-CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCC---------------------
Q psy17682        266 WNWDGSKLLTTC-KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKM---------------------  323 (490)
Q Consensus       266 ~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~---------------------  323 (490)
                      +.|||+.+...+ ..+.+.+.|..+.+...++....  ....+.++++|.++.+.+.+.                     
T Consensus       200 lpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdg--npd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfn  277 (635)
T PRK02888        200 LPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDG--NLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFN  277 (635)
T ss_pred             cCCCCCEeecccceeEEEEEEECccceEEEEEEeCC--CcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEc
Confidence            445665443222 34567888888877777766433  256778888888776664111                     


Q ss_pred             ----------------ceeEEEEecCCCCC--CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCee
Q psy17682        324 ----------------SERQYSLRAPDHLD--EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFV  385 (490)
Q Consensus       324 ----------------~~~~i~iwd~~~~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~  385 (490)
                                      .++.|.+.|.++..  .......+........+.++|||+++++++..+.+|.|.|+...+...
T Consensus       278 i~~iea~vkdGK~~~V~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~  357 (635)
T PRK02888        278 IARIEEAVKAGKFKTIGGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLF  357 (635)
T ss_pred             hHHHHHhhhCCCEEEECCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhh
Confidence                            12346666666510  011333344556678899999999999999999999999998854211


Q ss_pred             --------EEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecC
Q psy17682        386 --------HYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNN  423 (490)
Q Consensus       386 --------~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~  423 (490)
                              .......-+..-...+|.++|....+-  ++.+-.|++..
T Consensus       358 ~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        358 DGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             hccCCccceEEEeeccCCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence                    112222233345678999998644333  66777899876

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.17  E-value=0.00069  Score=64.53  Aligned_cols=213  Identities=15%  Similarity=0.167  Sum_probs=110.1

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccccccee-eecccccCEEEEEEee---CC----CCEE
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV-DLLYHQRRVGLVLWHP---TA----QNVL  231 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~p---~~----~~~l  231 (490)
                      .+....++|++++.+.-|  ++|.|.++|.+.|.|++....+..-.-... .-......++++.|..   .+    .-++
T Consensus        81 l~~~~~g~vtal~~S~iG--Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L  158 (395)
T PF08596_consen   81 LLDAKQGPVTALKNSDIG--FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICL  158 (395)
T ss_dssp             EE---S-SEEEEEE-BTS--EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEE
T ss_pred             heeccCCcEeEEecCCCc--EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEE
Confidence            344558999999998655  999999999999999976655443111000 0111345688888862   11    1378


Q ss_pred             EEEeCCCcEEEEECC-C--Ce----eEEEEecCCCcEEEEE-EcCC-----------------C---CEEEEEeCCCeEE
Q psy17682        232 LTAGSDNNVAIWNVG-T--GE----IMIQIECHPDIVYSAS-WNWD-----------------G---SKLLTTCKDKKMR  283 (490)
Q Consensus       232 ~s~~~dg~v~iwd~~-~--~~----~~~~~~~~~~~v~~~~-~~~~-----------------~---~~l~~~~~dg~i~  283 (490)
                      ++|...|.+.+|.+. .  +.    .......+.+.|..+. ++.+                 +   +-++....+..++
T Consensus       159 ~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~ir  238 (395)
T PF08596_consen  159 LVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIR  238 (395)
T ss_dssp             EEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEE
T ss_pred             EEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceE
Confidence            889999999999875 1  21    1112223556666555 3221                 1   1244445578899


Q ss_pred             EEeCCCCceeeeeeecCCCceeEEEEe-----CCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc--CCCceeeeee
Q psy17682        284 IINPRTGAIEEEAVCHEGSKATRAIYL-----KSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD--TSNGVMFPLY  356 (490)
Q Consensus       284 iwd~~~~~~~~~~~~~~~~~~~~~~~s-----~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~--~~~~i~~~~~  356 (490)
                      ++...+.+...... ........+.+-     ..+..|++-.   .+|.++++.+-..+.........  ....+....+
T Consensus       239 v~~~~~~k~~~K~~-~~~~~~~~~~vv~~~~~~~~~~Lv~l~---~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssi  314 (395)
T PF08596_consen  239 VFKPPKSKGAHKSF-DDPFLCSSASVVPTISRNGGYCLVCLF---NNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSSI  314 (395)
T ss_dssp             EE-TT---EEEEE--SS-EEEEEEEEEEEE-EEEEEEEEEEE---TTSEEEEEETTT--EEEEEE-SS---HHHHTT-EE
T ss_pred             EEeCCCCcccceee-ccccccceEEEEeecccCCceEEEEEE---CCCcEEEEECCCchHhhcccCCCccccccccccEE
Confidence            99998877665544 221223333442     2456666666   68999999998766443333211  1123556778


Q ss_pred             cCCCCeEEEEecCCCeEEEEEecC
Q psy17682        357 DPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       357 s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      +++|..++.+|  ...+.++.+-.
T Consensus       315 s~~Gdi~~~~g--psE~~l~sv~~  336 (395)
T PF08596_consen  315 SRNGDIFYWTG--PSEIQLFSVWG  336 (395)
T ss_dssp             -TTS-EEEE-S--SSEEEEEEEES
T ss_pred             CCCCCEEEEeC--cccEEEEEEEc
Confidence            89999876654  33455555543

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.06  E-value=0.0032  Score=60.99  Aligned_cols=183  Identities=8%  Similarity=-0.002  Sum_probs=109.4

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEE-EEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecC
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL-VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH  257 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~  257 (490)
                      ..++.++.+|.+..+|.++|+.+.....+        ..+.+ .... ++  .++.+..++.+.-+|.++|+.+..+...
T Consensus       121 ~~v~v~~~~g~l~ald~~tG~~~W~~~~~--------~~~~ssP~v~-~~--~v~v~~~~g~l~ald~~tG~~~W~~~~~  189 (394)
T PRK11138        121 GKVYIGSEKGQVYALNAEDGEVAWQTKVA--------GEALSRPVVS-DG--LVLVHTSNGMLQALNESDGAVKWTVNLD  189 (394)
T ss_pred             CEEEEEcCCCEEEEEECCCCCCcccccCC--------CceecCCEEE-CC--EEEEECCCCEEEEEEccCCCEeeeecCC
Confidence            46777888999999999999987765421        11211 1111 33  5777788899999999999998887632


Q ss_pred             CCcEE-EEEEcC--CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCC---c---eeEEEEeC---CCcEEEEEeCCCce
Q psy17682        258 PDIVY-SASWNW--DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGS---K---ATRAIYLK---SGLIFTTGFSKMSE  325 (490)
Q Consensus       258 ~~~v~-~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---~---~~~~~~s~---~~~~l~~~~~~~~~  325 (490)
                      ..... ...-+|  .+..++.++.+|.+..+|..+++.+.........   .   ...+..+|   ++.+++++    .+
T Consensus       190 ~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~----~~  265 (394)
T PRK11138        190 VPSLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALA----YN  265 (394)
T ss_pred             CCcccccCCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEE----cC
Confidence            11110 000122  2345777788999999999999876654321100   0   00111122   45444444    47


Q ss_pred             eEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682        326 RQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP  383 (490)
Q Consensus       326 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~  383 (490)
                      +.+..+|..+++...... ..   ....+.  ..+..++ .++.+|.+..+|..+++.
T Consensus       266 g~l~ald~~tG~~~W~~~-~~---~~~~~~--~~~~~vy-~~~~~g~l~ald~~tG~~  316 (394)
T PRK11138        266 GNLVALDLRSGQIVWKRE-YG---SVNDFA--VDGGRIY-LVDQNDRVYALDTRGGVE  316 (394)
T ss_pred             CeEEEEECCCCCEEEeec-CC---CccCcE--EECCEEE-EEcCCCeEEEEECCCCcE
Confidence            889999998876322211 11   111222  2455664 456799999999998873

>KOG1920|consensus

Probab=97.99  E-value=0.0026  Score=66.07  Aligned_cols=207  Identities=12%  Similarity=0.144  Sum_probs=121.2

Q ss_pred             cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEE
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVK  191 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~  191 (490)
                      .|.++.|-.+.     ..+..+...|.|.+.+.+     +..    ......-.+.|.+++|+||+ ..++..+.++++.
T Consensus        70 ~i~s~~fl~d~-----~~i~v~~~~G~iilvd~e-----t~~----~eivg~vd~GI~aaswS~De-e~l~liT~~~tll  134 (1265)
T KOG1920|consen   70 EIVSVQFLADT-----NSICVITALGDIILVDPE-----TLE----LEIVGNVDNGISAASWSPDE-ELLALITGRQTLL  134 (1265)
T ss_pred             ceEEEEEeccc-----ceEEEEecCCcEEEEccc-----ccc----eeeeeeccCceEEEeecCCC-cEEEEEeCCcEEE
Confidence            34455554442     234445666777776654     111    22233346789999999998 7888888777776


Q ss_pred             EEECCCCCcccc-----------------cccceeeeccc---------------------ccCEEEEEEeeCCCCEEEE
Q psy17682        192 VWQIPDGGISRT-----------------LTEPVVDLLYH---------------------QRRVGLVLWHPTAQNVLLT  233 (490)
Q Consensus       192 iwd~~~~~~~~~-----------------~~~~~~~~~~~---------------------~~~v~~~~~~p~~~~~l~s  233 (490)
                      +-.- +-..+..                 +......+.|.                     .+.=+++.|.-+|+ ++++
T Consensus       135 ~mT~-~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~-~fAV  212 (1265)
T KOG1920|consen  135 FMTK-DFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGE-YFAV  212 (1265)
T ss_pred             EEec-cccchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCc-EEEE
Confidence            5432 1110000                 00001111111                     11124589999996 7776


Q ss_pred             Ee----CC-CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe---CCCeEEEEeCCCCceeeee--eecCCC-
Q psy17682        234 AG----SD-NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC---KDKKMRIINPRTGAIEEEA--VCHEGS-  302 (490)
Q Consensus       234 ~~----~d-g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~--~~~~~~-  302 (490)
                      ..    .+ ..|+|||-+ |..-..-....+.-.+++|-|.|..+++..   .|+.|.+|.-+ |-.-..+  .-.... 
T Consensus       213 s~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErN-GL~hg~f~l~~p~de~  290 (1265)
T KOG1920|consen  213 SFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERN-GLRHGEFVLPFPLDEK  290 (1265)
T ss_pred             EEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecC-CccccccccCCccccc
Confidence            32    23 789999976 443222222334446899999999998864   45678888744 3222211  111222 


Q ss_pred             ceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC
Q psy17682        303 KATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD  337 (490)
Q Consensus       303 ~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~  337 (490)
                      .+..++|+.++.+|++-........|++|-+.+..
T Consensus       291 ~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh  325 (1265)
T KOG1920|consen  291 EVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYH  325 (1265)
T ss_pred             chheeeecCCCCceeeeecccccceEEEEEecCeE
Confidence            28899999999999985444456669999888754

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=97.98  E-value=0.0062  Score=58.42  Aligned_cols=231  Identities=15%  Similarity=0.111  Sum_probs=147.5

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG  246 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~  246 (490)
                      ....+...|++....++-.....+..-+.. .......      ...-......++.++.+.+.++....++.|.+.|..
T Consensus        32 ~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~-~n~~~~~------~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~  104 (381)
T COG3391          32 GPGGVAVNPDGTQVYVANSGSNDVSVIDAT-SNTVTQS------LSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTA  104 (381)
T ss_pred             CCceeEEcCccCEEEEEeecCceeeecccc-cceeeee------ccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCc
Confidence            455667777774444443333344444433 1111110      000113346778888887677777777999999988


Q ss_pred             CCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC---CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCC
Q psy17682        247 TGEIMIQIECHPDIVYSASWNWDGSKLLTTCK---DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKM  323 (490)
Q Consensus       247 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~  323 (490)
                      +.+....... ......++++|+++.+.++..   ++++.+.|..+.+...+..... . ...++++|+|..+.....  
T Consensus       105 ~~~~~~~~~v-G~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~-~-P~~~a~~p~g~~vyv~~~--  179 (381)
T COG3391         105 TNTVLGSIPV-GLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGN-T-PTGVAVDPDGNKVYVTNS--  179 (381)
T ss_pred             ccceeeEeee-ccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCC-C-cceEEECCCCCeEEEEec--
Confidence            7777666652 236678999999987776665   6889999999998888744322 2 488999999996665542  


Q ss_pred             ceeEEEEecCCCCCCCeEEE---eccCCCceeeeeecCCCCeEEEEecCC--CeEEEEEecCCCCeeEEeeeeeCCCcee
Q psy17682        324 SERQYSLRAPDHLDEPIVMV---ELDTSNGVMFPLYDPDTNLVYLCGKGD--SVIRYFEITAEPPFVHYINTFQTPDPQR  398 (490)
Q Consensus       324 ~~~~i~iwd~~~~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~~g~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~i~  398 (490)
                      .++.+.+.|........ -.   .......-..+.++|+|++++++-..+  +.+...|..++..... ....... ...
T Consensus       180 ~~~~v~vi~~~~~~v~~-~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~-~~~~~~~-~~~  256 (381)
T COG3391         180 DDNTVSVIDTSGNSVVR-GSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTAT-DLPVGSG-APR  256 (381)
T ss_pred             CCCeEEEEeCCCcceec-cccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEe-ccccccC-CCC
Confidence            57899999976543211 00   122234457789999999887776555  6888888888752211 1111122 456


Q ss_pred             eEEEeeCceeEEee
Q psy17682        399 GIGMMPKRGCDVNS  412 (490)
Q Consensus       399 ~~~~sp~~~~l~~~  412 (490)
                      .+..+|+|..+...
T Consensus       257 ~v~~~p~g~~~yv~  270 (381)
T COG3391         257 GVAVDPAGKAAYVA  270 (381)
T ss_pred             ceeECCCCCEEEEE
Confidence            78999999876655

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.98  E-value=0.0033  Score=59.75  Aligned_cols=225  Identities=14%  Similarity=0.126  Sum_probs=125.5

Q ss_pred             CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-cC--------
Q psy17682        187 DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CH--------  257 (490)
Q Consensus       187 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~--------  257 (490)
                      .+.+.+||+++++.... .       .....+....|+|+|. .++-.. ++.|.+++..+++..+.-. +.        
T Consensus        22 ~~~y~i~d~~~~~~~~l-~-------~~~~~~~~~~~sP~g~-~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~   91 (353)
T PF00930_consen   22 KGDYYIYDIETGEITPL-T-------PPPPKLQDAKWSPDGK-YIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVP   91 (353)
T ss_dssp             EEEEEEEETTTTEEEES-S--------EETTBSEEEE-SSST-EEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB-
T ss_pred             ceeEEEEecCCCceEEC-c-------CCccccccceeecCCC-eeEEEe-cCceEEEECCCCCeEEeccccceeEEcCcc
Confidence            46789999988654332 1       1256788999999996 666554 5789999987775433221 20        


Q ss_pred             --------CCcEEEEEEcCCCCEEEEEeCCC------------------------------------eEEEEeCCCCcee
Q psy17682        258 --------PDIVYSASWNWDGSKLLTTCKDK------------------------------------KMRIINPRTGAIE  293 (490)
Q Consensus       258 --------~~~v~~~~~~~~~~~l~~~~~dg------------------------------------~i~iwd~~~~~~~  293 (490)
                              -+.-..+-||||+++|+....|.                                    .+.++|+.+++..
T Consensus        92 dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~  171 (353)
T PF00930_consen   92 DWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTT  171 (353)
T ss_dssp             -HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCC
T ss_pred             ceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEE
Confidence                    11234688999999988765321                                    2444555555432


Q ss_pred             eee-e---ecCCCceeEEEEeCCCc-EEEE-EeCCCceeEEEEecCCCCCCCeEEEeccCCCce---eeeeec-CCCCeE
Q psy17682        294 EEA-V---CHEGSKATRAIYLKSGL-IFTT-GFSKMSERQYSLRAPDHLDEPIVMVELDTSNGV---MFPLYD-PDTNLV  363 (490)
Q Consensus       294 ~~~-~---~~~~~~~~~~~~s~~~~-~l~~-~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i---~~~~~s-~~~~~l  363 (490)
                      ..- .   ......+..+.|.+++. +++. .........+.+.|..++.+....... ....+   ....|. +++..+
T Consensus       172 ~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~-~~~Wv~~~~~~~~~~~~~~~~  250 (353)
T PF00930_consen  172 ELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEET-SDGWVDVYDPPHFLGPDGNEF  250 (353)
T ss_dssp             EE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEE-SSSSSSSSSEEEE-TTTSSEE
T ss_pred             EeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEec-CCcceeeecccccccCCCCEE
Confidence            111 1   11233478889999988 4433 333445567788888876654444332 22222   244554 666655


Q ss_pred             EEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceee-EEEeeCceeEE-eecc----eeEEEEecCC
Q psy17682        364 YLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRG-IGMMPKRGCDV-NSCE----IGRFFRLNNS  424 (490)
Q Consensus       364 ~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~-~~~sp~~~~l~-~~~~----~~~~~~~~~~  424 (490)
                      +.....||.-+||-+.......+.+.  .+.-.|.. +.+++++..+. .+..    .-.+|.+.-.
T Consensus       251 l~~s~~~G~~hly~~~~~~~~~~~lT--~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~  315 (353)
T PF00930_consen  251 LWISERDGYRHLYLYDLDGGKPRQLT--SGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLD  315 (353)
T ss_dssp             EEEEETTSSEEEEEEETTSSEEEESS---SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETT
T ss_pred             EEEEEcCCCcEEEEEcccccceeccc--cCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeC
Confidence            56666888766666665443333332  23334644 67888765433 2222    4466666554

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG1008|consensus

Probab=97.98  E-value=3.8e-06  Score=80.19  Aligned_cols=206  Identities=13%  Similarity=0.131  Sum_probs=129.6

Q ss_pred             cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE----eCC
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG----SED  187 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~----~~d  187 (490)
                      .+.+++..-+.-   ..+++.+..+|.|.+..+..    .-.  ....+..+|..+.++++|++-+.+.||.|    -.|
T Consensus        58 y~kcva~~y~~d---~cIlavG~atG~I~l~s~r~----~hd--Ss~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnd  128 (783)
T KOG1008|consen   58 YVKCVASFYGND---RCILAVGSATGNISLLSVRH----PHD--SSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRND  128 (783)
T ss_pred             CceeehhhcCCc---hhhhhhccccCceEEeecCC----ccc--ccceecccccccccccccccccHHHHHhhhhhhccc
Confidence            455555544431   35677788889999887641    111  12335568899999999999765778777    346


Q ss_pred             CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe-eEEEEecCCCcEEEEEE
Q psy17682        188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE-IMIQIECHPDIVYSASW  266 (490)
Q Consensus       188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~v~~~~~  266 (490)
                      ..+.|||+.++-.. ....+...- +......+++|..+. .++.+|.....+.++|++... ....+  .+..+..+..
T Consensus       129 s~~~Iwdi~s~ltv-Pke~~~fs~-~~l~gqns~cwlrd~-klvlaGm~sr~~~ifdlRqs~~~~~sv--nTk~vqG~tV  203 (783)
T KOG1008|consen  129 SSLKIWDINSLLTV-PKESPLFSS-STLDGQNSVCWLRDT-KLVLAGMTSRSVHIFDLRQSLDSVSSV--NTKYVQGITV  203 (783)
T ss_pred             CCccceecccccCC-Ccccccccc-ccccCccccccccCc-chhhcccccchhhhhhhhhhhhhhhhh--hhhhccccee
Confidence            78999999876221 111111111 133455688998666 488888888899999998332 12222  2445667788


Q ss_pred             cC-CCCEEEEEeCCCeEEEEe-CCCCc-eeeeeeecCC----CceeEEEEeCCC-cEEEEEeCCCceeEEEEecCCC
Q psy17682        267 NW-DGSKLLTTCKDKKMRIIN-PRTGA-IEEEAVCHEG----SKATRAIYLKSG-LIFTTGFSKMSERQYSLRAPDH  335 (490)
Q Consensus       267 ~~-~~~~l~~~~~dg~i~iwd-~~~~~-~~~~~~~~~~----~~~~~~~~s~~~-~~l~~~~~~~~~~~i~iwd~~~  335 (490)
                      .| .+.++++-. ||.|.+|| .+.-+ ++..+. +..    ..+..++|.|.. -++++...  ..++|+++|+..
T Consensus       204 dp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~-~~~N~~~~~l~~~aycPtrtglla~l~R--dS~tIrlydi~~  276 (783)
T KOG1008|consen  204 DPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIIL-RNENKKPKQLFALAYCPTRTGLLAVLSR--DSITIRLYDICV  276 (783)
T ss_pred             cCCCCCceeccc-cCceeeccchhhhccHHHHHh-hCCCCcccceeeEEeccCCcchhhhhcc--CcceEEEecccc
Confidence            88 667777655 99999999 44332 222222 111    137888999873 24444442  467899999864

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.97  E-value=0.0011  Score=67.82  Aligned_cols=224  Identities=9%  Similarity=0.010  Sum_probs=128.8

Q ss_pred             CEEEEE-eCCCcEEEEECCCCCcccccccceeeeccccc-CEEEEEEee-----CCCCEEEEEeCCCcEEEEECCCCe--
Q psy17682        179 NVIASG-SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQR-RVGLVLWHP-----TAQNVLLTAGSDNNVAIWNVGTGE--  249 (490)
Q Consensus       179 ~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~p-----~~~~~l~s~~~dg~v~iwd~~~~~--  249 (490)
                      ++|+.- .....|.-.|++.|+.+..+..       |.. +|..++-..     ... .-+.|-.+..+..||.|-..  
T Consensus       494 ~mil~~~~~~~~ly~mDLe~GKVV~eW~~-------~~~~~v~~~~p~~K~aqlt~e-~tflGls~n~lfriDpR~~~~k  565 (794)
T PF08553_consen  494 NMILLDPNNPNKLYKMDLERGKVVEEWKV-------HDDIPVVDIAPDSKFAQLTNE-QTFLGLSDNSLFRIDPRLSGNK  565 (794)
T ss_pred             ceEeecCCCCCceEEEecCCCcEEEEeec-------CCCcceeEecccccccccCCC-ceEEEECCCceEEeccCCCCCc
Confidence            444443 4557888999999998877653       433 255543321     122 34566677889999998532  


Q ss_pred             eEEE-Ee--cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCcee
Q psy17682        250 IMIQ-IE--CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSER  326 (490)
Q Consensus       250 ~~~~-~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~  326 (490)
                      .+.. ..  .......|++-..+| +||+|+.+|.||+||- .+...++....-+.+|..+..+.||+++++.+    +.
T Consensus       566 ~v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~-~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc----~t  639 (794)
T PF08553_consen  566 LVDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDR-LGKRAKTALPGLGDPIIGIDVTADGKWILATC----KT  639 (794)
T ss_pred             eeeccccccccCCCceEEEecCCc-eEEEEeCCCcEEeecc-cchhhhhcCCCCCCCeeEEEecCCCcEEEEee----cc
Confidence            3321 11  234557788777665 6999999999999994 44444444433455799999999999988775    66


Q ss_pred             EEEEecCCC--C-----------------CCCeEEEec-cC--------CC--ceeeeeecC----CCCeEEEEecCCCe
Q psy17682        327 QYSLRAPDH--L-----------------DEPIVMVEL-DT--------SN--GVMFPLYDP----DTNLVYLCGKGDSV  372 (490)
Q Consensus       327 ~i~iwd~~~--~-----------------~~~~~~~~~-~~--------~~--~i~~~~~s~----~~~~l~~~g~~dg~  372 (490)
                      .+.+++..-  +                 ..|..+... .|        ..  ..+...|+-    ..+.| + .+....
T Consensus       640 yLlLi~t~~~~g~~~g~~GF~~~~~~~~kp~Pr~L~L~pe~~~~~~~~~~~~~~Ft~a~Fnt~~~~~E~~I-v-tstG~f  717 (794)
T PF08553_consen  640 YLLLIDTLIKDGKNSGKLGFEKSFGKDKKPQPRRLQLKPEHVAYMQHETGKPISFTPAKFNTGIGKQETSI-V-TSTGPF  717 (794)
T ss_pred             eEEEEEEeeecCCccCccccccccCccCCCCCeEEecCHHHHHHHHhccCCCceeeceEEecCCCCccceE-E-EeccCE
Confidence            677776421  0                 112222110 01        11  122344432    23455 3 345678


Q ss_pred             EEEEEecC---CCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEE
Q psy17682        373 IRYFEITA---EPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRF  418 (490)
Q Consensus       373 i~iwd~~~---~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~  418 (490)
                      +.+|++..   +......+..+...--.-...|..+...+++..+.+.+
T Consensus       718 ~v~Wnf~kV~~g~~~~Y~ikry~~~V~~dnF~fg~d~~vival~~dV~m  766 (794)
T PF08553_consen  718 VVTWNFKKVKRGKKDPYQIKRYDENVVADNFKFGSDKNVIVALPNDVNM  766 (794)
T ss_pred             EEEEEHHHHhCCCCCceEEEEcCCceEEccceeCCCCcEEEEccchhhh
Confidence            99999874   32222234434332222445666676676666554433

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG4640|consensus

Probab=97.95  E-value=4.9e-05  Score=72.83  Aligned_cols=96  Identities=17%  Similarity=0.259  Sum_probs=80.2

Q ss_pred             cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEE-EEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy17682        214 HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVY-SASWNWDGSKLLTTCKDKKMRIINPRTGAI  292 (490)
Q Consensus       214 ~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  292 (490)
                      -...+.-+.|+|.-+ ++|.+..+|.|.++.+. .+.+.++.-+...++ +++|.|||+.|++|-.||+|++.|+.++..
T Consensus        19 l~~~i~~~ewnP~~d-LiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~   96 (665)
T KOG4640|consen   19 LPINIKRIEWNPKMD-LIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGR   96 (665)
T ss_pred             cccceEEEEEcCccc-hhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCc
Confidence            345688899999986 99999999999999987 778888886777777 999999999999999999999999999988


Q ss_pred             eeeeeecCCCceeEEEEeC
Q psy17682        293 EEEAVCHEGSKATRAIYLK  311 (490)
Q Consensus       293 ~~~~~~~~~~~~~~~~~s~  311 (490)
                      +..........+.++.|++
T Consensus        97 l~~~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   97 LVSFLFSVETDISKGIWDR  115 (665)
T ss_pred             eeccccccccchheeeccc
Confidence            7774322333477787863

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.93  E-value=0.0081  Score=58.09  Aligned_cols=199  Identities=9%  Similarity=0.152  Sum_probs=102.5

Q ss_pred             cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE-------ecCCCcE
Q psy17682        189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI-------ECHPDIV  261 (490)
Q Consensus       189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-------~~~~~~v  261 (490)
                      .|+||+. .|+.+..+.     +  ..+.+.++.|..+.  .|+....||.+++||+. |+....+       .-....+
T Consensus        62 ~I~iys~-sG~ll~~i~-----w--~~~~iv~~~wt~~e--~LvvV~~dG~v~vy~~~-G~~~fsl~~~i~~~~v~e~~i  130 (410)
T PF04841_consen   62 SIQIYSS-SGKLLSSIP-----W--DSGRIVGMGWTDDE--ELVVVQSDGTVRVYDLF-GEFQFSLGEEIEEEKVLECRI  130 (410)
T ss_pred             EEEEECC-CCCEeEEEE-----E--CCCCEEEEEECCCC--eEEEEEcCCEEEEEeCC-CceeechhhhccccCcccccc
Confidence            4899984 565555433     2  23789999999875  46667789999999986 3331111       1111122


Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-eeeeee---e-----cCCCceeE-EEEeCCCcEEEEEeCCCceeEEEEe
Q psy17682        262 YSASWNWDGSKLLTTCKDKKMRIINPRTGA-IEEEAV---C-----HEGSKATR-AIYLKSGLIFTTGFSKMSERQYSLR  331 (490)
Q Consensus       262 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~---~-----~~~~~~~~-~~~s~~~~~l~~~~~~~~~~~i~iw  331 (490)
                      ....+..+|  ++.-..++.+++..-.... ..+.+.   .     +....... ..++.+....+...   .++.+.+-
T Consensus       131 ~~~~~~~~G--ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~---~g~~i~~i  205 (410)
T PF04841_consen  131 FAIWFYKNG--IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLA---NGETIYII  205 (410)
T ss_pred             cccccCCCC--EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEe---cCCEEEEE
Confidence            222333355  3333345555554322221 111111   0     00000111 22333433333332   23444433


Q ss_pred             cCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeC--CCceeeEEEeeCceeE
Q psy17682        332 APDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQT--PDPQRGIGMMPKRGCD  409 (490)
Q Consensus       332 d~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~i~~~~~sp~~~~l  409 (490)
                      +......      ....+.+..++.||+|+++ |.-..+|.+.+....-.+.    +..+..  ......+.|+-+...+
T Consensus       206 ~~~~~~~------i~~~~~i~~iavSpng~~i-Al~t~~g~l~v~ssDf~~~----~~e~~~~~~~~p~~~~WCG~dav~  274 (410)
T PF04841_consen  206 DENSFKQ------IDSDGPIIKIAVSPNGKFI-ALFTDSGNLWVVSSDFSEK----LCEFDTDSKSPPKQMAWCGNDAVV  274 (410)
T ss_pred             Ecccccc------ccCCCCeEEEEECCCCCEE-EEEECCCCEEEEECcccce----eEEeecCcCCCCcEEEEECCCcEE
Confidence            3221111      2234679999999999999 5666789988887654442    222222  2466788888776544


Q ss_pred             Eeecc
Q psy17682        410 VNSCE  414 (490)
Q Consensus       410 ~~~~~  414 (490)
                      +.-.+
T Consensus       275 l~~~~  279 (410)
T PF04841_consen  275 LSWED  279 (410)
T ss_pred             EEeCC
Confidence            44333

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=97.90  E-value=0.002  Score=62.26  Aligned_cols=191  Identities=10%  Similarity=0.056  Sum_probs=100.6

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      .+.+....-....+.++|+| ++++. +.||...|+.....+..            ..+....++|.+.+  .+|+-...
T Consensus        25 ~k~lg~~~~~p~~ls~npng-r~v~V-~g~geY~iyt~~~~r~k------------~~G~g~~~vw~~~n--~yAv~~~~   88 (443)
T PF04053_consen   25 VKELGSCEIYPQSLSHNPNG-RFVLV-CGDGEYEIYTALAWRNK------------AFGSGLSFVWSSRN--RYAVLESS   88 (443)
T ss_dssp             -EEEEE-SS--SEEEE-TTS-SEEEE-EETTEEEEEETTTTEEE------------EEEE-SEEEE-TSS--EEEEE-TT
T ss_pred             eccCCCCCcCCeeEEECCCC-CEEEE-EcCCEEEEEEccCCccc------------ccCceeEEEEecCc--cEEEEECC
Confidence            33444455668899999988 67777 45778888883222110            23445678899854  57888778


Q ss_pred             CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEE
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFT  317 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~  317 (490)
                      +.|.|+.--+.+....++. ...+..+-.   |..|...+. +.|.+||..+++.++.+...   .+..+.|+++|.+++
T Consensus        89 ~~I~I~kn~~~~~~k~i~~-~~~~~~If~---G~LL~~~~~-~~i~~yDw~~~~~i~~i~v~---~vk~V~Ws~~g~~va  160 (443)
T PF04053_consen   89 STIKIYKNFKNEVVKSIKL-PFSVEKIFG---GNLLGVKSS-DFICFYDWETGKLIRRIDVS---AVKYVIWSDDGELVA  160 (443)
T ss_dssp             S-EEEEETTEE-TT------SS-EEEEE----SSSEEEEET-TEEEEE-TTT--EEEEESS----E-EEEEE-TTSSEEE
T ss_pred             CeEEEEEcCccccceEEcC-CcccceEEc---CcEEEEECC-CCEEEEEhhHcceeeEEecC---CCcEEEEECCCCEEE
Confidence            9999974323333334442 223444433   787777765 48999999999999888643   278999999999999


Q ss_pred             EEeCCCceeEEEEecCCCC--------CCCeEEEeccC-CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        318 TGFSKMSERQYSLRAPDHL--------DEPIVMVELDT-SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       318 ~~~~~~~~~~i~iwd~~~~--------~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      ..+    +..+.|.+.+..        .....+...+. ...|.+.+|..+ -++ .+..  +.++.  +-.|+
T Consensus       161 l~t----~~~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d-~fi-YtT~--~~lkY--l~~Ge  224 (443)
T PF04053_consen  161 LVT----KDSIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED-CFI-YTTS--NHLKY--LVNGE  224 (443)
T ss_dssp             EE-----S-SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT-EEE-EE-T--TEEEE--EETTE
T ss_pred             EEe----CCeEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC-EEE-EEcC--CeEEE--EEcCC
Confidence            886    455666654432        00001111111 456888888876 344 3332  25665  54443

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.89  E-value=0.0012  Score=49.44  Aligned_cols=101  Identities=17%  Similarity=0.247  Sum_probs=71.0

Q ss_pred             eeEEEE---CCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682        168 VLDIAW---SPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN  244 (490)
Q Consensus       168 V~~~~~---~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd  244 (490)
                      |++|++   ..+|.+.|++|+.|..||+|+-.  ..+..+.        ..+.|+++.-...+  .|+.+-.+|+|-+|+
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~--------e~~~v~~L~~~~~~--~F~Y~l~NGTVGvY~   69 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEIT--------ETDKVTSLCSLGGG--RFAYALANGTVGVYD   69 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEe--------cccceEEEEEcCCC--EEEEEecCCEEEEEe
Confidence            455554   45666899999999999999843  3333332        45678888777664  699999999999998


Q ss_pred             CCCCeeEEEEecCCCcEEEEEEcC-C--C-CEEEEEeCCCeEE
Q psy17682        245 VGTGEIMIQIECHPDIVYSASWNW-D--G-SKLLTTCKDKKMR  283 (490)
Q Consensus       245 ~~~~~~~~~~~~~~~~v~~~~~~~-~--~-~~l~~~~~dg~i~  283 (490)
                      -  .+.+...+ .+..+.++++.. +  | ..|++|-.+|.|-
T Consensus        70 ~--~~RlWRiK-SK~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   70 R--SQRLWRIK-SKNQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             C--cceeeeec-cCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            5  34456666 344577776654 3  3 3788888888764

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=97.86  E-value=0.0052  Score=59.51  Aligned_cols=178  Identities=10%  Similarity=0.079  Sum_probs=92.4

Q ss_pred             ecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy17682        211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTG  290 (490)
Q Consensus       211 ~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  290 (490)
                      +.........+.++|+|+ .++. +.||...|+..........     +.....+|.+. ..+|+-...++|.|+.--+.
T Consensus        28 lg~~~~~p~~ls~npngr-~v~V-~g~geY~iyt~~~~r~k~~-----G~g~~~vw~~~-n~yAv~~~~~~I~I~kn~~~   99 (443)
T PF04053_consen   28 LGSCEIYPQSLSHNPNGR-FVLV-CGDGEYEIYTALAWRNKAF-----GSGLSFVWSSR-NRYAVLESSSTIKIYKNFKN   99 (443)
T ss_dssp             EEE-SS--SEEEE-TTSS-EEEE-EETTEEEEEETTTTEEEEE-----EE-SEEEE-TS-SEEEEE-TTS-EEEEETTEE
T ss_pred             CCCCCcCCeeEEECCCCC-EEEE-EcCCEEEEEEccCCccccc-----CceeEEEEecC-ccEEEEECCCeEEEEEcCcc
Confidence            444555678999999996 5555 4568888888544443322     23457889984 45777777889999732223


Q ss_pred             ceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC
Q psy17682        291 AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD  370 (490)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d  370 (490)
                      +....+....  .+..+ |.  |.+|...+    ++.|.+||..+.+   .+..++. .+|..+.|+++|+++++.+  +
T Consensus       100 ~~~k~i~~~~--~~~~I-f~--G~LL~~~~----~~~i~~yDw~~~~---~i~~i~v-~~vk~V~Ws~~g~~val~t--~  164 (443)
T PF04053_consen  100 EVVKSIKLPF--SVEKI-FG--GNLLGVKS----SDFICFYDWETGK---LIRRIDV-SAVKYVIWSDDGELVALVT--K  164 (443)
T ss_dssp             -TT-----SS---EEEE-E---SSSEEEEE----TTEEEEE-TTT-----EEEEESS--E-EEEEE-TTSSEEEEE---S
T ss_pred             ccceEEcCCc--ccceE-Ec--CcEEEEEC----CCCEEEEEhhHcc---eeeEEec-CCCcEEEEECCCCEEEEEe--C
Confidence            3222333221  12323 22  88887775    5589999999865   3444443 3489999999999996554  4


Q ss_pred             CeEEEEEecCC----------CCeeEEeeeeeCCCceeeEEEeeCceeEEeecc
Q psy17682        371 SVIRYFEITAE----------PPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       371 g~i~iwd~~~~----------~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  414 (490)
                      ..+.|++....          +.....+...  ...|.+.+|..+ -++.+...
T Consensus       165 ~~i~il~~~~~~~~~~~~~g~e~~f~~~~E~--~~~IkSg~W~~d-~fiYtT~~  215 (443)
T PF04053_consen  165 DSIYILKYNLEAVAAIPEEGVEDAFELIHEI--SERIKSGCWVED-CFIYTTSN  215 (443)
T ss_dssp             -SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE---S--SEEEEETT-EEEEE-TT
T ss_pred             CeEEEEEecchhcccccccCchhceEEEEEe--cceeEEEEEEcC-EEEEEcCC
Confidence            45677665433          0012233221  357888999887 44444444

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=97.84  E-value=0.034  Score=53.81  Aligned_cols=143  Identities=10%  Similarity=0.039  Sum_probs=89.7

Q ss_pred             EEEEeCCCCce--eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCC
Q psy17682        282 MRIINPRTGAI--EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPD  359 (490)
Q Consensus       282 i~iwd~~~~~~--~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~  359 (490)
                      -.+|++...+.  +......-...+.+++++|+...++.|+   .||.|.+||.......    .....-..+.++|+|+
T Consensus       238 ~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC---~DgSiiLyD~~~~~t~----~~ka~~~P~~iaWHp~  310 (545)
T PF11768_consen  238 SCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGC---EDGSIILYDTTRGVTL----LAKAEFIPTLIAWHPD  310 (545)
T ss_pred             EEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEe---cCCeEEEEEcCCCeee----eeeecccceEEEEcCC
Confidence            45566655432  2222233344599999999999999998   7999999998865322    1123345788999999


Q ss_pred             CCeEEEEecCCCeEEEEEecCCC-------------CeeEEeeeeeCCCceeeEEEeeCceeEEeec-----ceeEEEEe
Q psy17682        360 TNLVYLCGKGDSVIRYFEITAEP-------------PFVHYINTFQTPDPQRGIGMMPKRGCDVNSC-----EIGRFFRL  421 (490)
Q Consensus       360 ~~~l~~~g~~dg~i~iwd~~~~~-------------~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-----~~~~~~~~  421 (490)
                      |..+ ++|+..|.+.+||+.-..             +.......+.....+-.+.|++.....-.+.     ...-+..+
T Consensus       311 gai~-~V~s~qGelQ~FD~ALspi~~qLlsEd~~P~~~L~Ls~yf~~~~~L~~iqW~~~~~~~~~~~~~~~~~~~L~l~f  389 (545)
T PF11768_consen  311 GAIF-VVGSEQGELQCFDMALSPIKMQLLSEDATPKSTLQLSKYFRVSSSLVHIQWAPAPQLSSQGEFYADTYDLLLLVF  389 (545)
T ss_pred             CcEE-EEEcCCceEEEEEeecCccceeeccccCCCccEEeeehhccCcchhheeEeccCCCccccCCCcCCccceEEEEE
Confidence            9998 788899999999987432             1222222233445567888886654432221     12234444


Q ss_pred             cCCCceEEEEEE
Q psy17682        422 NNSGLCQVVSMT  433 (490)
Q Consensus       422 ~~~~~~~~i~~~  433 (490)
                      +.+. +..+.+.
T Consensus       390 ~~GP-l~vl~~~  400 (545)
T PF11768_consen  390 ERGP-LAVLRFK  400 (545)
T ss_pred             cCCC-eEEEEEe
Confidence            5554 5555543

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=97.83  E-value=0.0074  Score=53.43  Aligned_cols=218  Identities=12%  Similarity=0.133  Sum_probs=111.5

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      ...+.|=.+.+..+.|+|+...+++.....+.|...+.+ |.                  +...+.-.+    ..-...|
T Consensus        14 ~~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~------------------vlr~i~l~g----~~D~EgI   70 (248)
T PF06977_consen   14 AKPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GK------------------VLRRIPLDG----FGDYEGI   70 (248)
T ss_dssp             EEE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---------------------EEEEEE-SS-----SSEEEE
T ss_pred             eeECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CC------------------EEEEEeCCC----CCCceeE
Confidence            456777777899999999886788888888898877764 33                  111111000    0012334


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCC-CCcc--eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRIN-ADHA--LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~-~~~~--~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                      ++..+.     .++.+....+.+.++............. ..+.  ....++..+.+++|.|.+ +.|+.+-+..-..+|
T Consensus        71 ~y~g~~-----~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~-~~L~v~kE~~P~~l~  144 (248)
T PF06977_consen   71 TYLGNG-----RYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKT-NRLFVAKERKPKRLY  144 (248)
T ss_dssp             EE-STT-----EEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTT-TEEEEEEESSSEEEE
T ss_pred             EEECCC-----EEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCC-CEEEEEeCCCChhhE
Confidence            443332     2444556677888777742111111000 0011  112355679999999987 556666666667777


Q ss_pred             ECCC---CCcccccc-cceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCC---------Cc
Q psy17682        194 QIPD---GGISRTLT-EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHP---------DI  260 (490)
Q Consensus       194 d~~~---~~~~~~~~-~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---------~~  260 (490)
                      .+..   ........ ............+.+++++|...++++....+..|..+| .+|+.+..+.-..         .+
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~Q  223 (248)
T PF06977_consen  145 EVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQ  223 (248)
T ss_dssp             EEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---S
T ss_pred             EEccccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCC
Confidence            7654   11111100 000001123445889999999777888888899999999 5787776655222         35


Q ss_pred             EEEEEEcCCCCEEEEEeCCCeEEEE
Q psy17682        261 VYSASWNWDGSKLLTTCKDKKMRII  285 (490)
Q Consensus       261 v~~~~~~~~~~~l~~~~~dg~i~iw  285 (490)
                      .-.|+|.++|++.++ +.-+..++|
T Consensus       224 pEGIa~d~~G~LYIv-sEpNlfy~f  247 (248)
T PF06977_consen  224 PEGIAFDPDGNLYIV-SEPNLFYRF  247 (248)
T ss_dssp             EEEEEE-TT--EEEE-ETTTEEEEE
T ss_pred             ccEEEECCCCCEEEE-cCCceEEEe
Confidence            789999999865555 455555544

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>KOG3621|consensus

Probab=97.83  E-value=0.0024  Score=62.42  Aligned_cols=148  Identities=16%  Similarity=0.160  Sum_probs=93.2

Q ss_pred             EEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccc-cc
Q psy17682        128 EEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL-TE  206 (490)
Q Consensus       128 ~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~  206 (490)
                      .+++.+...|.+.+|+..     .+...  .....+-.+.+..+..+++. .++|.|+..|.|.++-+..+...... ..
T Consensus        46 ~~l~~GsS~G~lyl~~R~-----~~~~~--~~~~~~~~~~~~~~~vs~~e-~lvAagt~~g~V~v~ql~~~~p~~~~~~t  117 (726)
T KOG3621|consen   46 EYLAMGSSAGSVYLYNRH-----TGEMR--KLKNEGATGITCVRSVSSVE-YLVAAGTASGRVSVFQLNKELPRDLDYVT  117 (726)
T ss_pred             ceEEEecccceEEEEecC-----chhhh--cccccCccceEEEEEecchh-HhhhhhcCCceEEeehhhccCCCcceeec
Confidence            367788999999999875     22211  11222344566667788866 88999999999999988764322111 11


Q ss_pred             ceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe----eEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeE
Q psy17682        207 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE----IMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM  282 (490)
Q Consensus       207 ~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  282 (490)
                      +.  -..|...|++++|++++. .+++|...|+|..-.+.+..    ..+.+-...+.|-.+... ++.+|++...  ..
T Consensus       118 ~~--d~~~~~rVTal~Ws~~~~-k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~-q~~LLVStl~--r~  191 (726)
T KOG3621|consen  118 PC--DKSHKCRVTALEWSKNGM-KLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL-QSYLLVSTLT--RC  191 (726)
T ss_pred             cc--cccCCceEEEEEeccccc-EEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc-cceehHhhhh--hh
Confidence            11  122788999999999995 89999999999998887621    122222345667666665 3333333322  23


Q ss_pred             EEEeCCC
Q psy17682        283 RIINPRT  289 (490)
Q Consensus       283 ~iwd~~~  289 (490)
                      .++++..
T Consensus       192 ~Lc~tE~  198 (726)
T KOG3621|consen  192 ILCQTEA  198 (726)
T ss_pred             heeecch
Confidence            4445443

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.81  E-value=0.041  Score=53.77  Aligned_cols=203  Identities=12%  Similarity=0.117  Sum_probs=112.2

Q ss_pred             eeEEEECCCCCCEEEEEeCCC----cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC------
Q psy17682        168 VLDIAWSPHDDNVIASGSEDC----VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD------  237 (490)
Q Consensus       168 V~~~~~~p~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d------  237 (490)
                      +....++|+|..++++-+..|    .+++.|+++++.+...      +.  ......+.|.+++..++.+...+      
T Consensus       126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~------i~--~~~~~~~~W~~d~~~~~y~~~~~~~~~~~  197 (414)
T PF02897_consen  126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDG------IE--NPKFSSVSWSDDGKGFFYTRFDEDQRTSD  197 (414)
T ss_dssp             EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEE------EE--EEESEEEEECTTSSEEEEEECSTTTSS-C
T ss_pred             eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCc------cc--ccccceEEEeCCCCEEEEEEeCccccccc
Confidence            346789999944444444444    4999999998554321      11  11123499999986455554332      


Q ss_pred             ----CcEEEEECCCCee--EEEEecCCCc--EEEEEEcCCCCEEEEEeC---C-CeEEEEeCCCC----ceeeeeeecCC
Q psy17682        238 ----NNVAIWNVGTGEI--MIQIECHPDI--VYSASWNWDGSKLLTTCK---D-KKMRIINPRTG----AIEEEAVCHEG  301 (490)
Q Consensus       238 ----g~v~iwd~~~~~~--~~~~~~~~~~--v~~~~~~~~~~~l~~~~~---d-g~i~iwd~~~~----~~~~~~~~~~~  301 (490)
                          ..|+.|.+.+...  ...+......  ...+..++++++|+..+.   + ..+++.|+..+    .....+.....
T Consensus       198 ~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~  277 (414)
T PF02897_consen  198 SGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPRED  277 (414)
T ss_dssp             CGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSS
T ss_pred             CCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCC
Confidence                2378888876542  2344433222  668889999998776543   2 45888898875    22333333333


Q ss_pred             CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCC-eEEEeccCCCceeeeeecCCCCeEEEEecCCC--eEEEEEe
Q psy17682        302 SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEP-IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS--VIRYFEI  378 (490)
Q Consensus       302 ~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg--~i~iwd~  378 (490)
                      .....+... .+.+++....+...+.|...++...... .......+...+.-..+...+.+|++....++  .|+++++
T Consensus       278 ~~~~~v~~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~  356 (414)
T PF02897_consen  278 GVEYYVDHH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDL  356 (414)
T ss_dssp             S-EEEEEEE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEET
T ss_pred             ceEEEEEcc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEEC
Confidence            323334333 5555555545455677777788765531 12122344443343444556777767766665  6778888


Q ss_pred             c
Q psy17682        379 T  379 (490)
Q Consensus       379 ~  379 (490)
                      .
T Consensus       357 ~  357 (414)
T PF02897_consen  357 D  357 (414)
T ss_dssp             T
T ss_pred             C
Confidence            7

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>KOG3617|consensus

Probab=97.78  E-value=0.00016  Score=71.71  Aligned_cols=108  Identities=22%  Similarity=0.374  Sum_probs=86.1

Q ss_pred             EEECCCCCCEEEEEe----CCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC
Q psy17682        171 IAWSPHDDNVIASGS----EDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG  246 (490)
Q Consensus       171 ~~~~p~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~  246 (490)
                      ..|+|.. .++++++    ..|+|.||- ++|+..+....|        -.+++++|+|.. .+|+.|-.-|.+.+|...
T Consensus        21 ~SWHPse-PlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~P--------~hatSLCWHpe~-~vLa~gwe~g~~~v~~~~   89 (1416)
T KOG3617|consen   21 SSWHPSE-PLFAVASFSPERGGSVTIFA-DTGEPQRDVTYP--------VHATSLCWHPEE-FVLAQGWEMGVSDVQKTN   89 (1416)
T ss_pred             cccCCCC-ceeEEEEecCCCCceEEEEe-cCCCCCcccccc--------eehhhhccChHH-HHHhhccccceeEEEecC
Confidence            4788876 6777765    357899986 677765554433        235679999997 588888888999999987


Q ss_pred             CCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy17682        247 TGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRT  289 (490)
Q Consensus       247 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~  289 (490)
                      +.+.-.....|..+|..+.||++|..++++..-|.+.+|....
T Consensus        90 ~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~  132 (1416)
T KOG3617|consen   90 TTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDV  132 (1416)
T ss_pred             CceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeee
Confidence            7665555557999999999999999999999999999998763

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=97.77  E-value=0.036  Score=52.02  Aligned_cols=248  Identities=11%  Similarity=0.098  Sum_probs=123.5

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC---CCCEEEEEeCC------
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT---AQNVLLTAGSD------  237 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~d------  237 (490)
                      .-+.|+|.|+| .+++ +...|.|++++ ..+.....+................++++|+   ...+.++.+..      
T Consensus         3 ~P~~~a~~pdG-~l~v-~e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~   79 (331)
T PF07995_consen    3 NPRSMAFLPDG-RLLV-AERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGD   79 (331)
T ss_dssp             SEEEEEEETTS-CEEE-EETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSS
T ss_pred             CceEEEEeCCC-cEEE-EeCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCC
Confidence            45789999997 5655 46699999999 4443311111100112335567899999995   22233333321      


Q ss_pred             --CcEEEEECCCC-------eeE-EEEec---CCCcEEEEEEcCCCCEEEEEeCC-------------CeEEEEeCCCCc
Q psy17682        238 --NNVAIWNVGTG-------EIM-IQIEC---HPDIVYSASWNWDGSKLLTTCKD-------------KKMRIINPRTGA  291 (490)
Q Consensus       238 --g~v~iwd~~~~-------~~~-~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~iwd~~~~~  291 (490)
                        ..|.-|....+       +.+ ..+..   ..+.-..|+|.|||.++++.+..             |.|.-.+....-
T Consensus        80 ~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG~~  159 (331)
T PF07995_consen   80 NDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPDGSI  159 (331)
T ss_dssp             EEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETTSSB
T ss_pred             cceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEecccCcC
Confidence              23444444333       111 12222   34456779999999777666532             233333332110


Q ss_pred             ------------eeeee-eecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEe--------cCCCCCC-----------
Q psy17682        292 ------------IEEEA-VCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLR--------APDHLDE-----------  338 (490)
Q Consensus       292 ------------~~~~~-~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iw--------d~~~~~~-----------  338 (490)
                                  ....+ .++.+  ...++|+|. |.++++=........|.+-        .......           
T Consensus       160 p~dnP~~~~~~~~~~i~A~GlRN--~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~~~~  237 (331)
T PF07995_consen  160 PADNPFVGDDGADSEIYAYGLRN--PFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPPIGDAP  237 (331)
T ss_dssp             -TTSTTTTSTTSTTTEEEE--SE--EEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-ECTGS
T ss_pred             CCCCccccCCCceEEEEEeCCCc--cccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCcccccc
Confidence                        00011 12222  578999999 8777653211111223221        1111000           


Q ss_pred             -----CeEEEeccCCCceeeeeecC-------CCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeC
Q psy17682        339 -----PIVMVELDTSNGVMFPLYDP-------DTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPK  405 (490)
Q Consensus       339 -----~~~~~~~~~~~~i~~~~~s~-------~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~  405 (490)
                           ........++..+..+.|-.       .|.++ ++.-..+.|....+..+.........+. ....+.++++.||
T Consensus       238 ~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pD  316 (331)
T PF07995_consen  238 SCPGFVPPVFAYPPHSAPTGIIFYRGSAFPEYRGDLF-VADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPD  316 (331)
T ss_dssp             S-TTS---SEEETTT--EEEEEEE-SSSSGGGTTEEE-EEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETT
T ss_pred             CCCCcCccceeecCccccCceEEECCccCccccCcEE-EecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCC
Confidence                 00111223445566666654       34444 5555677888888876543332222222 2237899999999


Q ss_pred             ceeEEeecceeEEEE
Q psy17682        406 RGCDVNSCEIGRFFR  420 (490)
Q Consensus       406 ~~~l~~~~~~~~~~~  420 (490)
                      |.+.++.+...+||+
T Consensus       317 G~Lyv~~d~~G~iyR  331 (331)
T PF07995_consen  317 GALYVSDDSDGKIYR  331 (331)
T ss_dssp             SEEEEEE-TTTTEEE
T ss_pred             CeEEEEECCCCeEeC
Confidence            999998887777775

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.76  E-value=0.0028  Score=59.28  Aligned_cols=205  Identities=11%  Similarity=0.076  Sum_probs=96.6

Q ss_pred             CCEEEEEe-CCCcEEEEECCCCCcccccccceee--ec--ccccCEEEEEEeeCCCCEEEEEeC------CCcEEEEECC
Q psy17682        178 DNVIASGS-EDCVVKVWQIPDGGISRTLTEPVVD--LL--YHQRRVGLVLWHPTAQNVLLTAGS------DNNVAIWNVG  246 (490)
Q Consensus       178 ~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~--~~--~~~~~v~~~~~~p~~~~~l~s~~~------dg~v~iwd~~  246 (490)
                      +++|+..+ .++.|.|.|+.+.-..-.+.+.+..  +.  ..-.....+-.-|+|+ +++++-.      -|-+.+.|-+
T Consensus        87 Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~-imIS~lGd~~G~g~Ggf~llD~~  165 (461)
T PF05694_consen   87 RRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGR-IMISALGDADGNGPGGFVLLDGE  165 (461)
T ss_dssp             S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS---EEEEEEEETTS-S--EEEEE-TT
T ss_pred             CCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCcc-EEEEeccCCCCCCCCcEEEEcCc
Confidence            35666655 7789999998754322221111100  00  0112234455567885 7776522      2457788888


Q ss_pred             CCeeEEEEecC---CCcEEEEEEcCCCCEEEEEeC--------------------CCeEEEEeCCCCceeeeeeec-CCC
Q psy17682        247 TGEIMIQIECH---PDIVYSASWNWDGSKLLTTCK--------------------DKKMRIINPRTGAIEEEAVCH-EGS  302 (490)
Q Consensus       247 ~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~--------------------dg~i~iwd~~~~~~~~~~~~~-~~~  302 (490)
                      +.+........   ..--+.+-|.|..+.+++...                    ..++.+||+.+.+.++++... .+.
T Consensus       166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~  245 (461)
T PF05694_consen  166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQ  245 (461)
T ss_dssp             T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEE
T ss_pred             cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCC
Confidence            77777666532   233467788888888887652                    357999999999999998733 333


Q ss_pred             ceeEEEEeCC--CcEEEEEeCCCceeEEEEecCCCCCCC-eEEEeccC------------------CCceeeeeecCCCC
Q psy17682        303 KATRAIYLKS--GLIFTTGFSKMSERQYSLRAPDHLDEP-IVMVELDT------------------SNGVMFPLYDPDTN  361 (490)
Q Consensus       303 ~~~~~~~s~~--~~~l~~~~~~~~~~~i~iwd~~~~~~~-~~~~~~~~------------------~~~i~~~~~s~~~~  361 (490)
                      .+..+.|..+  ..+=.+|+. ......++|..+.+.-. ..+..+..                  ..-|+.+..|.|.+
T Consensus       246 ~pLEvRflH~P~~~~gFvg~a-Lss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDr  324 (461)
T PF05694_consen  246 MPLEVRFLHDPDANYGFVGCA-LSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDR  324 (461)
T ss_dssp             EEEEEEE-SSTT--EEEEEEE---EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-
T ss_pred             ceEEEEecCCCCccceEEEEe-ccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCC
Confidence            3556777655  332222221 12333444443332210 01111110                  12378899999999


Q ss_pred             eEEEEecCCCeEEEEEecCCCCe
Q psy17682        362 LVYLCGKGDSVIRYFEITAEPPF  384 (490)
Q Consensus       362 ~l~~~g~~dg~i~iwd~~~~~~~  384 (490)
                      +|+++.-.+|.|+.||+......
T Consensus       325 fLYvs~W~~GdvrqYDISDP~~P  347 (461)
T PF05694_consen  325 FLYVSNWLHGDVRQYDISDPFNP  347 (461)
T ss_dssp             EEEEEETTTTEEEEEE-SSTTS-
T ss_pred             EEEEEcccCCcEEEEecCCCCCC
Confidence            99999999999999999986533

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.75  E-value=0.011  Score=55.57  Aligned_cols=229  Identities=9%  Similarity=0.045  Sum_probs=109.0

Q ss_pred             EEEEeeCCCceEEEECCCCCCCCcccCCCCcceeec---cc----CCeeEEEECCCCCCEEEEEe--CC----CcEEEEE
Q psy17682        128 EEIRKLKSQQALSILPPPSTAPNTGRINADHALVGG---HK----GPVLDIAWSPHDDNVIASGS--ED----CVVKVWQ  194 (490)
Q Consensus       128 ~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~---h~----~~V~~~~~~p~~~~~l~s~~--~d----g~i~iwd  194 (490)
                      .+++-+...+.|.|++....    .+..+..++++.   +.    ..-..+..-|+| .+++|+-  .+    |-+.+.|
T Consensus        89 ~Li~PgL~SsrIyviD~~~d----Pr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G-~imIS~lGd~~G~g~Ggf~llD  163 (461)
T PF05694_consen   89 YLILPGLRSSRIYVIDTKTD----PRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDG-RIMISALGDADGNGPGGFVLLD  163 (461)
T ss_dssp             EEEEEBTTT--EEEEE--S-----TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS---EEEEEEEETTS-S--EEEEE-
T ss_pred             cEEeeeeccCcEEEEECCCC----CCCCceEeeeCHHHHHhhcCCCCCceeeecCCc-cEEEEeccCCCCCCCCcEEEEc
Confidence            45666778899999998622    222222233332   11    222334556777 6777752  22    4577778


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe--------------------CCCcEEEEECCCCeeEEEE
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG--------------------SDNNVAIWNVGTGEIMIQI  254 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~--------------------~dg~v~iwd~~~~~~~~~~  254 (490)
                      -++.+.......+    .+....-+.+-|.|.. +.++|..                    ...++.+||+.+.+.++++
T Consensus       164 ~~tf~v~g~We~~----~~~~~~gYDfw~qpr~-nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~i  238 (461)
T PF05694_consen  164 GETFEVKGRWEKD----RGPQPFGYDFWYQPRH-NVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTI  238 (461)
T ss_dssp             TTT--EEEE--SB-----TT------EEEETTT-TEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEE
T ss_pred             CccccccceeccC----CCCCCCCCCeEEcCCC-CEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEE
Confidence            6665554443321    1123445788888876 5788764                    2357999999999999998


Q ss_pred             ecCC--CcEEEEEEcC--CCCEEEE-EeCCCeEEEEeC-CCCc----eeeeeeec--------C--------CCceeEEE
Q psy17682        255 ECHP--DIVYSASWNW--DGSKLLT-TCKDKKMRIINP-RTGA----IEEEAVCH--------E--------GSKATRAI  308 (490)
Q Consensus       255 ~~~~--~~v~~~~~~~--~~~~l~~-~~~dg~i~iwd~-~~~~----~~~~~~~~--------~--------~~~~~~~~  308 (490)
                      .-..  .....+.|..  +..+=++ +.-..+|..|-- ..++    .+.++...        .        ...++.+.
T Consensus       239 dLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~  318 (461)
T PF05694_consen  239 DLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDIL  318 (461)
T ss_dssp             ES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EE
T ss_pred             ecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEE
Confidence            7332  2355677754  3343333 333444544433 3332    11112110        0        12378899


Q ss_pred             EeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccC-----------------CCceeeeeecCCCCeEEEEec
Q psy17682        309 YLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDT-----------------SNGVMFPLYDPDTNLVYLCGK  368 (490)
Q Consensus       309 ~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~-----------------~~~i~~~~~s~~~~~l~~~g~  368 (490)
                      .|.|.++|..+.-  ..|.++.||+.....|...-+..-                 .++..-+..|.||+.||+|.|
T Consensus       319 iSlDDrfLYvs~W--~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTnS  393 (461)
T PF05694_consen  319 ISLDDRFLYVSNW--LHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTNS  393 (461)
T ss_dssp             E-TTS-EEEEEET--TTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE--
T ss_pred             EccCCCEEEEEcc--cCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEee
Confidence            9999998877763  589999999998887776643211                 122366788999999988764

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=97.72  E-value=0.063  Score=53.49  Aligned_cols=191  Identities=14%  Similarity=0.168  Sum_probs=104.6

Q ss_pred             CCCcEEEEECCCCCcccccccce---eeec---------ccc-cCE-EEEEEeeCCCCEEEEEeCCC-------------
Q psy17682        186 EDCVVKVWQIPDGGISRTLTEPV---VDLL---------YHQ-RRV-GLVLWHPTAQNVLLTAGSDN-------------  238 (490)
Q Consensus       186 ~dg~i~iwd~~~~~~~~~~~~~~---~~~~---------~~~-~~v-~~~~~~p~~~~~l~s~~~dg-------------  238 (490)
                      .+|.+..+|..+++....+....   ....         .+. ..+ ...+..+.+. +++.++.++             
T Consensus       173 ~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g-~V~vg~~~g~~~~~~~~~~~~~  251 (488)
T cd00216         173 VRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTN-LVYVGTGNGSPWNWGGRRTPGD  251 (488)
T ss_pred             CCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCC-EEEEECCCCCCCccCCccCCCC
Confidence            36788999999998776543210   0000         000 111 1334444443 677776554             


Q ss_pred             -----cEEEEECCCCeeEEEEecCCCcEE------EEEEc----CCCC---EEEEEeCCCeEEEEeCCCCceeeeeeecC
Q psy17682        239 -----NVAIWNVGTGEIMIQIECHPDIVY------SASWN----WDGS---KLLTTCKDKKMRIINPRTGAIEEEAVCHE  300 (490)
Q Consensus       239 -----~v~iwd~~~~~~~~~~~~~~~~v~------~~~~~----~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  300 (490)
                           .|.-+|+.+|+.+..++.-.....      ...+.    -++.   .++.++.+|.++..|.++++.+.......
T Consensus       252 ~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~  331 (488)
T cd00216         252 NLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE  331 (488)
T ss_pred             CCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeec
Confidence                 688999999999888752111111      11111    1333   57788889999999999999887765221


Q ss_pred             CCceeEEEEeCCCcEEEEEeC--------------CCceeEEEEecCCCCCCCeEEEeccCC------CceeeeeecCCC
Q psy17682        301 GSKATRAIYLKSGLIFTTGFS--------------KMSERQYSLRAPDHLDEPIVMVELDTS------NGVMFPLYDPDT  360 (490)
Q Consensus       301 ~~~~~~~~~s~~~~~l~~~~~--------------~~~~~~i~iwd~~~~~~~~~~~~~~~~------~~i~~~~~s~~~  360 (490)
                          ..+..+| +.+++....              ...++.+.-.|..+++..-........      .....-.....+
T Consensus       332 ----~~~~~~~-~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g  406 (488)
T cd00216         332 ----QPMAYDP-GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAG  406 (488)
T ss_pred             ----cccccCC-ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecC
Confidence                1122333 322221110              013567777788777643332211000      011100111245


Q ss_pred             CeEEEEecCCCeEEEEEecCCCC
Q psy17682        361 NLVYLCGKGDSVIRYFEITAEPP  383 (490)
Q Consensus       361 ~~l~~~g~~dg~i~iwd~~~~~~  383 (490)
                      ..| +.++.||.++.+|..+++.
T Consensus       407 ~~v-~~g~~dG~l~ald~~tG~~  428 (488)
T cd00216         407 NLV-FAGAADGYFRAFDATTGKE  428 (488)
T ss_pred             CeE-EEECCCCeEEEEECCCCce
Confidence            666 5677899999999999983

The alignment model contains an 8-bladed beta-propeller.

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=97.71  E-value=0.025  Score=51.70  Aligned_cols=246  Identities=10%  Similarity=0.144  Sum_probs=138.3

Q ss_pred             EEEECCCCCCEEEEEe----------CCCcEEEEECCCCCccccccccee-eecccccCEEEEEEeeCCCCEEEEEeC--
Q psy17682        170 DIAWSPHDDNVIASGS----------EDCVVKVWQIPDGGISRTLTEPVV-DLLYHQRRVGLVLWHPTAQNVLLTAGS--  236 (490)
Q Consensus       170 ~~~~~p~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~p~~~~~l~s~~~--  236 (490)
                      .+..+|++ +.+++++          ..-.|.+||..+-.....+.-|.. ... .......++++.+++ +++....  
T Consensus        40 ~~~~spdg-k~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~-~~~~~~~~~ls~dgk-~~~V~N~TP  116 (342)
T PF06433_consen   40 NVALSPDG-KTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQ-VVPYKNMFALSADGK-FLYVQNFTP  116 (342)
T ss_dssp             EEEE-TTS-SEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B---BS--GGGEEE-TTSS-EEEEEEESS
T ss_pred             ceeECCCC-CEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchhe-ecccccceEEccCCc-EEEEEccCC
Confidence            35678988 5666542          234699999988876665544321 111 111223457788886 5544332  


Q ss_pred             CCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCceeeeee----ecCCCceeEEEEeC
Q psy17682        237 DNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPR-TGAIEEEAV----CHEGSKATRAIYLK  311 (490)
Q Consensus       237 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~----~~~~~~~~~~~~s~  311 (490)
                      .-.|.|.|+..++.+.++.- .+ +..+--++ .+-+.+-+.||++.-..+. .|+...+..    ......+..-++..
T Consensus       117 a~SVtVVDl~~~kvv~ei~~-PG-C~~iyP~~-~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~  193 (342)
T PF06433_consen  117 ATSVTVVDLAAKKVVGEIDT-PG-CWLIYPSG-NRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSR  193 (342)
T ss_dssp             SEEEEEEETTTTEEEEEEEG-TS-EEEEEEEE-TTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEET
T ss_pred             CCeEEEEECCCCceeeeecC-CC-EEEEEecC-CCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceEC
Confidence            45789999999998888773 22 22222122 2457888899999998887 455443221    11122233445554


Q ss_pred             C-CcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc-----------CCCceeeeeecCCCCeEEEEec-------CC--
Q psy17682        312 S-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD-----------TSNGVMFPLYDPDTNLVYLCGK-------GD--  370 (490)
Q Consensus       312 ~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~-----------~~~~i~~~~~s~~~~~l~~~g~-------~d--  370 (490)
                      . +.++...    ..|.|+--|+..... .......           ..++-..+++++..+.||+.-.       .|  
T Consensus       194 ~~~~~~F~S----y~G~v~~~dlsg~~~-~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpg  268 (342)
T PF06433_consen  194 DGGRLYFVS----YEGNVYSADLSGDSA-KFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPG  268 (342)
T ss_dssp             TTTEEEEEB----TTSEEEEEEETTSSE-EEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-E
T ss_pred             CCCeEEEEe----cCCEEEEEeccCCcc-cccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCc
Confidence            4 4455454    377888877775432 1111111           0123455788887777766431       12  


Q ss_pred             CeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce-eEEe--e-cceeEEEEecCCCceEEE
Q psy17682        371 SVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG-CDVN--S-CEIGRFFRLNNSGLCQVV  430 (490)
Q Consensus       371 g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~--~-~~~~~~~~~~~~~~~~~i  430 (490)
                      ..|.++|+.+++    .+.++....++.+++.+.+.+ +|.+  . .+.+.+|+..+++.+..+
T Consensus       269 teVWv~D~~t~k----rv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~  328 (342)
T PF06433_consen  269 TEVWVYDLKTHK----RVARIPLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSI  328 (342)
T ss_dssp             EEEEEEETTTTE----EEEEEEEEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE
T ss_pred             eEEEEEECCCCe----EEEEEeCCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeeh
Confidence            267788888876    444444445788999998864 4432  2 457899999998855444

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.69  E-value=0.013  Score=51.40  Aligned_cols=206  Identities=13%  Similarity=0.134  Sum_probs=123.3

Q ss_pred             eEEEECCCCCCEEEEEeCCCc-EEEEECCCCCcccccccc-eeeecccccCEEEEEEeeCCCCEEEEEeCC-----CcEE
Q psy17682        169 LDIAWSPHDDNVIASGSEDCV-VKVWQIPDGGISRTLTEP-VVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-----NNVA  241 (490)
Q Consensus       169 ~~~~~~p~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~v~  241 (490)
                      ..|.|+|.-+.-++-+-.=|+ ..++|....+....+... ...+.+|.      .|+|+|. +|++.-.|     |.|-
T Consensus        71 Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHG------vfs~dG~-~LYATEndfd~~rGViG  143 (366)
T COG3490          71 HGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHG------VFSPDGR-LLYATENDFDPNRGVIG  143 (366)
T ss_pred             CCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeeccc------ccCCCCc-EEEeecCCCCCCCceEE
Confidence            357888876666666666555 468888877765544322 12344443      6899996 66655443     6799


Q ss_pred             EEECCCC-eeEEEEecCCCcEEEEEEcCCCCEEEEEeC------------------CCeEEEEeCCCCceeeeeeec---
Q psy17682        242 IWNVGTG-EIMIQIECHPDIVYSASWNWDGSKLLTTCK------------------DKKMRIINPRTGAIEEEAVCH---  299 (490)
Q Consensus       242 iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------------dg~i~iwd~~~~~~~~~~~~~---  299 (490)
                      |||.+.+ +.+.++..|.-....+.|.+||+.++.+..                  .-++.+.|..+++.+....-.   
T Consensus       144 vYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l  223 (366)
T COG3490         144 VYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASL  223 (366)
T ss_pred             EEecccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhh
Confidence            9999854 456677778888889999999998887642                  113445555555544332211   


Q ss_pred             CCCceeEEEEeCCCcEEEEEeCCCc--eeEEEEecCCCCCCCeEEEecc------CCCceeeeeecCCCCeEEEEecCCC
Q psy17682        300 EGSKATRAIYLKSGLIFTTGFSKMS--ERQYSLRAPDHLDEPIVMVELD------TSNGVMFPLYDPDTNLVYLCGKGDS  371 (490)
Q Consensus       300 ~~~~~~~~~~s~~~~~l~~~~~~~~--~~~i~iwd~~~~~~~~~~~~~~------~~~~i~~~~~s~~~~~l~~~g~~dg  371 (490)
                      ....+..+...+||.+++.+-..+.  |.---+=-.. ...+.......      -...|-+++.+-+...+.++.-..+
T Consensus       224 ~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~-~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN  302 (366)
T COG3490         224 RQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFR-KGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGN  302 (366)
T ss_pred             hhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeecc-CCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCC
Confidence            1113777888888877765532110  0000000001 11111111111      1123667788877778767776777


Q ss_pred             eEEEEEecCCC
Q psy17682        372 VIRYFEITAEP  382 (490)
Q Consensus       372 ~i~iwd~~~~~  382 (490)
                      ...+||..++.
T Consensus       303 ~~vi~da~tG~  313 (366)
T COG3490         303 RAVIWDAATGA  313 (366)
T ss_pred             eEEEEEcCCCc
Confidence            88899999997

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=97.68  E-value=0.042  Score=50.23  Aligned_cols=226  Identities=16%  Similarity=0.175  Sum_probs=126.8

Q ss_pred             CCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEE-----
Q psy17682        178 DNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMI-----  252 (490)
Q Consensus       178 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~-----  252 (490)
                      ++.|+.|.++| +.+++.........+.        +...|..+...|+-. .+++- .|+.+.++++..-....     
T Consensus         7 ~~~L~vGt~~G-l~~~~~~~~~~~~~i~--------~~~~I~ql~vl~~~~-~llvL-sd~~l~~~~L~~l~~~~~~~~~   75 (275)
T PF00780_consen    7 GDRLLVGTEDG-LYVYDLSDPSKPTRIL--------KLSSITQLSVLPELN-LLLVL-SDGQLYVYDLDSLEPVSTSAPL   75 (275)
T ss_pred             CCEEEEEECCC-EEEEEecCCccceeEe--------ecceEEEEEEecccC-EEEEE-cCCccEEEEchhhccccccccc
Confidence            37899999998 8999983322222211        334499999999864 55544 35999999987544332     


Q ss_pred             ----------EEecCCCcEEEEE--EcCCCCEEEEEeCCCeEEEEeCCCC-----ceeeeeeecCCCceeEEEEeCCCcE
Q psy17682        253 ----------QIECHPDIVYSAS--WNWDGSKLLTTCKDKKMRIINPRTG-----AIEEEAVCHEGSKATRAIYLKSGLI  315 (490)
Q Consensus       253 ----------~~~~~~~~v~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~~~~~~s~~~~~  315 (490)
                                .+ .....+...+  -...+...++.....+|.+|.....     +..+.+...  ..+..+.|.  +..
T Consensus        76 ~~~~~~~~~~~~-~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp--~~~~~i~~~--~~~  150 (275)
T PF00780_consen   76 AFPKSRSLPTKL-PETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLP--DPPSSIAFL--GNK  150 (275)
T ss_pred             cccccccccccc-cccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcC--CCcEEEEEe--CCE
Confidence                      11 1233444444  1223444444444568888887653     344454433  248888888  556


Q ss_pred             EEEEeCCCceeEEEEecCCCCCCCeEEEeccC-----------CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682        316 FTTGFSKMSERQYSLRAPDHLDEPIVMVELDT-----------SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF  384 (490)
Q Consensus       316 l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~-----------~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~  384 (490)
                      ++.|.    .....+.|+.++... .+.....           ...+..+. -+++.+| ++.  |. +-+|=-..|++.
T Consensus       151 i~v~~----~~~f~~idl~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~L-l~~--~~-~g~fv~~~G~~~  220 (275)
T PF00780_consen  151 ICVGT----SKGFYLIDLNTGSPS-ELLDPSDSSSSFKSRNSSSKPLGIFQ-LSDNEFL-LCY--DN-IGVFVNKNGEPS  220 (275)
T ss_pred             EEEEe----CCceEEEecCCCCce-EEeCccCCcchhhhcccCCCceEEEE-eCCceEE-EEe--cc-eEEEEcCCCCcC
Confidence            66665    455778888864432 2211111           11222222 2345666 443  33 333433445433


Q ss_pred             eEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecCCCceEEEEE
Q psy17682        385 VHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSM  432 (490)
Q Consensus       385 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~~~~~~i~~  432 (490)
                      .  ...+.-.....++++... .+++...+.+.++++.++++++.+..
T Consensus       221 r--~~~i~W~~~p~~~~~~~p-yli~~~~~~iEV~~~~~~~lvQ~i~~  265 (275)
T PF00780_consen  221 R--KSTIQWSSAPQSVAYSSP-YLIAFSSNSIEVRSLETGELVQTIPL  265 (275)
T ss_pred             c--ccEEEcCCchhEEEEECC-EEEEECCCEEEEEECcCCcEEEEEEC
Confidence            2  122333345667777543 44455566789999999997777764

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.64  E-value=0.07  Score=52.11  Aligned_cols=201  Identities=13%  Similarity=0.129  Sum_probs=107.5

Q ss_pred             EEEEEEeeCCCCEEEEEeCCC----cEEEEECCCCeeEEEE-ecCCCcEEEEEEcCCCCEEEEEeCC-----------Ce
Q psy17682        218 VGLVLWHPTAQNVLLTAGSDN----NVAIWNVGTGEIMIQI-ECHPDIVYSASWNWDGSKLLTTCKD-----------KK  281 (490)
Q Consensus       218 v~~~~~~p~~~~~l~s~~~dg----~v~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d-----------g~  281 (490)
                      +....++|+++.++++.+..|    .++++|+.+++.+... ...  ....+.|.++++.|+....+           ..
T Consensus       126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~  203 (414)
T PF02897_consen  126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ  203 (414)
T ss_dssp             EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred             eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence            446788999974444545545    4999999999876532 221  12239999998877766533           24


Q ss_pred             EEEEeCCCCcee--eeeeecCCCc-eeEEEEeCCCcEEEEEeCCCce-eEEEEecCCCC---CCCeEEEeccCCCceeee
Q psy17682        282 MRIINPRTGAIE--EEAVCHEGSK-ATRAIYLKSGLIFTTGFSKMSE-RQYSLRAPDHL---DEPIVMVELDTSNGVMFP  354 (490)
Q Consensus       282 i~iwd~~~~~~~--~~~~~~~~~~-~~~~~~s~~~~~l~~~~~~~~~-~~i~iwd~~~~---~~~~~~~~~~~~~~i~~~  354 (490)
                      |+.|.+.+....  ..+....... ...+..++++++++.....+.. ..+.+.++...   ........ ....++...
T Consensus       204 v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~-~~~~~~~~~  282 (414)
T PF02897_consen  204 VYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLS-PREDGVEYY  282 (414)
T ss_dssp             EEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEE-ESSSS-EEE
T ss_pred             EEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEe-CCCCceEEE
Confidence            888888876543  3333334333 6678899999988766554455 78999998874   22222222 222333332


Q ss_pred             eecCCCCeEEEEe--cCCCeEEEEEecCCCCeeEEeeeeeCCC--ceeeEEEeeCceeEEee----cceeEEEEec
Q psy17682        355 LYDPDTNLVYLCG--KGDSVIRYFEITAEPPFVHYINTFQTPD--PQRGIGMMPKRGCDVNS----CEIGRFFRLN  422 (490)
Q Consensus       355 ~~s~~~~~l~~~g--~~dg~i~iwd~~~~~~~~~~~~~~~~~~--~i~~~~~sp~~~~l~~~----~~~~~~~~~~  422 (490)
                      .-+..+.+++.+.  ...+.|.-.++..............+..  .+..+....+. +++..    ...++++++.
T Consensus       283 v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~-Lvl~~~~~~~~~l~v~~~~  357 (414)
T PF02897_consen  283 VDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDY-LVLSYRENGSSRLRVYDLD  357 (414)
T ss_dssp             EEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTE-EEEEEEETTEEEEEEEETT
T ss_pred             EEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCE-EEEEEEECCccEEEEEECC
Confidence            2222444443443  2345666667666552111111222222  35555554443 32322    2255666666

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=97.64  E-value=0.049  Score=49.87  Aligned_cols=203  Identities=11%  Similarity=0.094  Sum_probs=100.3

Q ss_pred             EEECCCCCCEEEEE--eCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC-C
Q psy17682        171 IAWSPHDDNVIASG--SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG-T  247 (490)
Q Consensus       171 ~~~~p~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~-~  247 (490)
                      ++++.+| ++++..  +=-.+|.|-|+..++.+..+..|         .+..+  -|.++.-|.+-+.||.+.-..+. .
T Consensus       100 ~~ls~dg-k~~~V~N~TPa~SVtVVDl~~~kvv~ei~~P---------GC~~i--yP~~~~~F~~lC~DGsl~~v~Ld~~  167 (342)
T PF06433_consen  100 FALSADG-KFLYVQNFTPATSVTVVDLAAKKVVGEIDTP---------GCWLI--YPSGNRGFSMLCGDGSLLTVTLDAD  167 (342)
T ss_dssp             EEE-TTS-SEEEEEEESSSEEEEEEETTTTEEEEEEEGT---------SEEEE--EEEETTEEEEEETTSCEEEEEETST
T ss_pred             eEEccCC-cEEEEEccCCCCeEEEEECCCCceeeeecCC---------CEEEE--EecCCCceEEEecCCceEEEEECCC
Confidence            3555555 444433  22235667777666655544322         12222  23332346666677777777666 4


Q ss_pred             CeeEEEEe----cCCCcE-EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee--eee-----------ecCCCceeEEEE
Q psy17682        248 GEIMIQIE----CHPDIV-YSASWNWDGSKLLTTCKDKKMRIINPRTGAIEE--EAV-----------CHEGSKATRAIY  309 (490)
Q Consensus       248 ~~~~~~~~----~~~~~v-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~-----------~~~~~~~~~~~~  309 (490)
                      |+...+..    ....++ ..-++...+..++-.+.+|.|+-.|+.......  .+.           ...+  ...+++
T Consensus       168 Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG--~Q~~A~  245 (342)
T PF06433_consen  168 GKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGG--WQLIAY  245 (342)
T ss_dssp             SSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-S--SS-EEE
T ss_pred             CCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcc--eeeeee
Confidence            44432211    111111 222334444445556677777777776554221  111           0111  345677


Q ss_pred             eCCCcEEEEEe-------CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCe-EEEEecCCCeEEEEEecCC
Q psy17682        310 LKSGLIFTTGF-------SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNL-VYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       310 s~~~~~l~~~~-------~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~g~~dg~i~iwd~~~~  381 (490)
                      ++....|.+--       .+.....|.++|+.+.+....+   .-...+.++..+.+.+- |++....++.+.+||..++
T Consensus       246 ~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri---~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tG  322 (342)
T PF06433_consen  246 HAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARI---PLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATG  322 (342)
T ss_dssp             ETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEE---EEEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT-
T ss_pred             ccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEE---eCCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCC
Confidence            76543333322       1112356778888876543332   22345778999998874 4344456899999999999


Q ss_pred             CCeeEEeeee
Q psy17682        382 PPFVHYINTF  391 (490)
Q Consensus       382 ~~~~~~~~~~  391 (490)
                      + +.+.+..+
T Consensus       323 k-~~~~~~~l  331 (342)
T PF06433_consen  323 K-LVRSIEQL  331 (342)
T ss_dssp             --EEEEE---
T ss_pred             c-EEeehhcc
Confidence            7 34444433

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>smart00320 WD40 WD40 repeats

Probab=97.64  E-value=0.0001  Score=43.83  Aligned_cols=38  Identities=24%  Similarity=0.227  Sum_probs=33.7

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEe
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILIS   73 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd   73 (490)
                      .+...+.+|...|.++.|+|.+ .++++++.|+.+++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDG-KYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCC-CEEEEecCCCeEEEcC
Confidence            3456677899999999999988 8999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.63  E-value=0.04  Score=51.69  Aligned_cols=201  Identities=11%  Similarity=0.125  Sum_probs=112.0

Q ss_pred             CcEEEEECCCCCcccccccceeeecccccCEEEEEE---eeC---CCCEEEEEeC----------CCcEEEEECCCC---
Q psy17682        188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLW---HPT---AQNVLLTAGS----------DNNVAIWNVGTG---  248 (490)
Q Consensus       188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~p~---~~~~l~s~~~----------dg~v~iwd~~~~---  248 (490)
                      ..|++.|..+.+.+..+.     +. ....+.+++.   ..+   ...+++.|..          .|.|.++++...   
T Consensus         2 s~i~l~d~~~~~~~~~~~-----l~-~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~   75 (321)
T PF03178_consen    2 SSIRLVDPTTFEVLDSFE-----LE-PNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPEN   75 (321)
T ss_dssp             -EEEEEETTTSSEEEEEE-----EE-TTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS---
T ss_pred             cEEEEEeCCCCeEEEEEE-----CC-CCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEccccc
Confidence            357788877766554432     22 2233444433   222   1346776643          288999999884   


Q ss_pred             --e--eEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-eeeeeeecCCCceeEEEEeCCCcEEEEEeCCC
Q psy17682        249 --E--IMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGA-IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKM  323 (490)
Q Consensus       249 --~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~  323 (490)
                        +  .+... ...++|++++-- +++ |+++. ++.|++|++...+ ....-..+....+.++...  +.++++|.   
T Consensus        76 ~~~l~~i~~~-~~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD---  146 (321)
T PF03178_consen   76 NFKLKLIHST-EVKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGD---  146 (321)
T ss_dssp             --EEEEEEEE-EESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEE---
T ss_pred             ceEEEEEEEE-eecCcceEhhhh-CCE-EEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEE---
Confidence              2  22222 357889999876 344 55444 5899999999887 4444433333345555554  55777776   


Q ss_pred             ceeEEEEecCCCCCC-CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC------CC-eeEEeeeeeCCC
Q psy17682        324 SERQYSLRAPDHLDE-PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE------PP-FVHYINTFQTPD  395 (490)
Q Consensus       324 ~~~~i~iwd~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~------~~-~~~~~~~~~~~~  395 (490)
                      ....+.++..+.... ...+..-.....++++.|-++++.+ +++..+|.+.++.....      .. .......+..+.
T Consensus       147 ~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~-i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~  225 (321)
T PF03178_consen  147 AMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTI-IVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGD  225 (321)
T ss_dssp             SSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEE-EEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS
T ss_pred             cccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEE-EEEcCCCeEEEEEECCCCcccccccccceeEEEEECCC
Confidence            344455543332221 2222222234558888888777655 78899999999998742      12 344555666667


Q ss_pred             ceeeE---EEee
Q psy17682        396 PQRGI---GMMP  404 (490)
Q Consensus       396 ~i~~~---~~sp  404 (490)
                      .|+++   ++.|
T Consensus       226 ~v~~~~~~~l~~  237 (321)
T PF03178_consen  226 IVNSFRRGSLIP  237 (321)
T ss_dssp             -EEEEEE--SS-
T ss_pred             ccceEEEEEeee
Confidence            78777   4445

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>KOG4649|consensus

Probab=97.62  E-value=0.022  Score=49.20  Aligned_cols=130  Identities=12%  Similarity=0.090  Sum_probs=93.0

Q ss_pred             EEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecC
Q psy17682        221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHE  300 (490)
Q Consensus       221 ~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  300 (490)
                      +...++.+.+++.|+..+.+.--|..+|+.+.+-. -...+.+-+.- -|++++.|+..|.+++.+..+|+....+....
T Consensus        16 LVV~~dskT~v~igSHs~~~~avd~~sG~~~We~i-lg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~   93 (354)
T KOG4649|consen   16 LVVCNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAI-LGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILE   93 (354)
T ss_pred             EEEecCCceEEEEecCCceEEEecCCCCcEEeehh-hCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehh
Confidence            33445556789999999999999999999877644 23334333322 47789999999999999999998888776443


Q ss_pred             CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecC
Q psy17682        301 GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDP  358 (490)
Q Consensus       301 ~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~  358 (490)
                      . .-......+++.++..|+   .|++.+..|.++..+....+-  ......+.+..|
T Consensus        94 ~-vk~~a~~d~~~glIycgs---hd~~~yalD~~~~~cVykskc--gG~~f~sP~i~~  145 (354)
T KOG4649|consen   94 T-VKVRAQCDFDGGLIYCGS---HDGNFYALDPKTYGCVYKSKC--GGGTFVSPVIAP  145 (354)
T ss_pred             h-hccceEEcCCCceEEEec---CCCcEEEecccccceEEeccc--CCceeccceecC
Confidence            3 245566888999999998   789999999988765444221  122234556666

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.61  E-value=0.014  Score=54.83  Aligned_cols=175  Identities=10%  Similarity=0.025  Sum_probs=101.7

Q ss_pred             CcEEEEECCCCeeEEEEec-CCCcEEEEE---EcCC----CCEEEEEeC----------CCeEEEEeCCCC----ceeee
Q psy17682        238 NNVAIWNVGTGEIMIQIEC-HPDIVYSAS---WNWD----GSKLLTTCK----------DKKMRIINPRTG----AIEEE  295 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~-~~~~v~~~~---~~~~----~~~l~~~~~----------dg~i~iwd~~~~----~~~~~  295 (490)
                      ..|++.|..+.+.+..+.- ....+.+++   +..+    ..+|++|+.          .|.|.++++...    ..+..
T Consensus         2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~   81 (321)
T PF03178_consen    2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL   81 (321)
T ss_dssp             -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred             cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence            3588888888887766552 233455444   3322    457777763          289999999984    12222


Q ss_pred             e-e-ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeE
Q psy17682        296 A-V-CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVI  373 (490)
Q Consensus       296 ~-~-~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i  373 (490)
                      + . ...+ ++++++-- +++ |+++.    ...|.+|++...+.............+.++...  ++++ +.|.....+
T Consensus        82 i~~~~~~g-~V~ai~~~-~~~-lv~~~----g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I-~vgD~~~sv  151 (321)
T PF03178_consen   82 IHSTEVKG-PVTAICSF-NGR-LVVAV----GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYI-LVGDAMKSV  151 (321)
T ss_dssp             EEEEEESS--EEEEEEE-TTE-EEEEE----TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEE-EEEESSSSE
T ss_pred             EEEEeecC-cceEhhhh-CCE-EEEee----cCEEEEEEccCcccchhhheecceEEEEEEecc--ccEE-EEEEcccCE
Confidence            2 1 2233 47777655 555 55553    678999999876623333333333455555544  5577 678777888


Q ss_pred             EEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--eeEEEEec
Q psy17682        374 RYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--IGRFFRLN  422 (490)
Q Consensus       374 ~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~~~  422 (490)
                      .++...........+..-.....++++.|-+++..++.++.  .+.++...
T Consensus       152 ~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~  202 (321)
T PF03178_consen  152 SLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN  202 (321)
T ss_dssp             EEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred             EEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence            88877764322334443334567899999977656666655  44455554

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=97.60  E-value=0.035  Score=55.28  Aligned_cols=204  Identities=9%  Similarity=-0.000  Sum_probs=115.8

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCE--EEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRV--GLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC  256 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~  256 (490)
                      ..++.++.++.+.-.|.++++.+........... ....+  ..+... ++. .++.++.++.|.-+|.++|+.+.++..
T Consensus        62 g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~-~~~~~~~~g~~~~-~~~-~V~v~~~~g~v~AlD~~TG~~~W~~~~  138 (488)
T cd00216          62 GDMYFTTSHSALFALDAATGKVLWRYDPKLPADR-GCCDVVNRGVAYW-DPR-KVFFGTFDGRLVALDAETGKQVWKFGN  138 (488)
T ss_pred             CEEEEeCCCCcEEEEECCCChhhceeCCCCCccc-cccccccCCcEEc-cCC-eEEEecCCCeEEEEECCCCCEeeeecC
Confidence            4677777889999999999987765432110000 00011  111111 212 677888899999999999999988764


Q ss_pred             CCCc--EEEEEEcC--CCCEEEEEe---------CCCeEEEEeCCCCceeeeeeecCC--------------------Cc
Q psy17682        257 HPDI--VYSASWNW--DGSKLLTTC---------KDKKMRIINPRTGAIEEEAVCHEG--------------------SK  303 (490)
Q Consensus       257 ~~~~--v~~~~~~~--~~~~l~~~~---------~dg~i~iwd~~~~~~~~~~~~~~~--------------------~~  303 (490)
                      ....  -..+.-+|  .+..++.++         .++.++.+|..+++.+..+.....                    ..
T Consensus       139 ~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~v  218 (488)
T cd00216         139 NDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTS  218 (488)
T ss_pred             CCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCc
Confidence            3221  01111122  224455554         368899999999998877653211                    00


Q ss_pred             eeEEEEeCCCcEEEEEeCCC---------------ceeEEEEecCCCCCCCeEEEeccCCC----ceeeeeec----CCC
Q psy17682        304 ATRAIYLKSGLIFTTGFSKM---------------SERQYSLRAPDHLDEPIVMVELDTSN----GVMFPLYD----PDT  360 (490)
Q Consensus       304 ~~~~~~s~~~~~l~~~~~~~---------------~~~~i~iwd~~~~~~~~~~~~~~~~~----~i~~~~~s----~~~  360 (490)
                      ....++.+.+..+..++.++               ..+.+.-.|..+++..-......+..    ......+.    -+|
T Consensus       219 w~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g  298 (488)
T cd00216         219 WASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDG  298 (488)
T ss_pred             cCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCC
Confidence            12344555555555565221               22478888998887544433221110    11111111    133


Q ss_pred             C--eEEEEecCCCeEEEEEecCCCCee
Q psy17682        361 N--LVYLCGKGDSVIRYFEITAEPPFV  385 (490)
Q Consensus       361 ~--~l~~~g~~dg~i~iwd~~~~~~~~  385 (490)
                      .  .+++.++.+|.+...|..+++.+.
T Consensus       299 ~~~~~V~~g~~~G~l~ald~~tG~~~W  325 (488)
T cd00216         299 KPVPAIVHAPKNGFFYVLDRTTGKLIS  325 (488)
T ss_pred             CeeEEEEEECCCceEEEEECCCCcEee
Confidence            3  234678889999999999998543

The alignment model contains an 8-bladed beta-propeller.

>KOG3621|consensus

Probab=97.54  E-value=0.00067  Score=66.16  Aligned_cols=164  Identities=9%  Similarity=0.006  Sum_probs=105.5

Q ss_pred             CCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC
Q psy17682        257 HPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL  336 (490)
Q Consensus       257 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~  336 (490)
                      +...|.--+++..+++++.|+.-|.+++|+-..++....-..-....+.....+++..++|+|+   ..+.|.++-+...
T Consensus        32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt---~~g~V~v~ql~~~  108 (726)
T KOG3621|consen   32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGT---ASGRVSVFQLNKE  108 (726)
T ss_pred             CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhc---CCceEEeehhhcc
Confidence            3444555566778899999999999999997766544333211223366777889999999998   5788888887763


Q ss_pred             CCCeE-EEe---ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeE-EeeeeeCCCceeeEEEeeCceeEEe
Q psy17682        337 DEPIV-MVE---LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVH-YINTFQTPDPQRGIGMMPKRGCDVN  411 (490)
Q Consensus       337 ~~~~~-~~~---~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~i~~~~~sp~~~~l~~  411 (490)
                      ..+.. +..   ..|...|++++|++++..+ .+|...|+|..-.+.....+.. ....+.-...|-.+..... .+|++
T Consensus       109 ~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~-ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q~-~LLVS  186 (726)
T KOG3621|consen  109 LPRDLDYVTPCDKSHKCRVTALEWSKNGMKL-YSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQS-YLLVS  186 (726)
T ss_pred             CCCcceeeccccccCCceEEEEEecccccEE-eecCCCceEEEEEechhhhhccccceeeccCcceEEeecccc-eehHh
Confidence            32221 111   1246679999999999999 6898999999888877211111 1111222345666655543 45565


Q ss_pred             ecceeEEEEecCCC
Q psy17682        412 SCEIGRFFRLNNSG  425 (490)
Q Consensus       412 ~~~~~~~~~~~~~~  425 (490)
                      ..-...+++.+...
T Consensus       187 tl~r~~Lc~tE~et  200 (726)
T KOG3621|consen  187 TLTRCILCQTEAET  200 (726)
T ss_pred             hhhhhheeecchhH
Confidence            55444555555444

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=97.54  E-value=0.05  Score=48.02  Aligned_cols=185  Identities=11%  Similarity=0.136  Sum_probs=113.8

Q ss_pred             eeEEEECCCCCCEEEEEeCCC--cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEEC
Q psy17682        168 VLDIAWSPHDDNVIASGSEDC--VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNV  245 (490)
Q Consensus       168 V~~~~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~  245 (490)
                      .-++.|..+| .++-+.+.-|  .|+.+|+.+++......-|      ..---..++...+  .+..-.=.++...+||.
T Consensus        47 TQGL~~~~~g-~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~------~~~FgEGit~~~d--~l~qLTWk~~~~f~yd~  117 (264)
T PF05096_consen   47 TQGLEFLDDG-TLYESTGLYGQSSLRKVDLETGKVLQSVPLP------PRYFGEGITILGD--KLYQLTWKEGTGFVYDP  117 (264)
T ss_dssp             EEEEEEEETT-EEEEEECSTTEEEEEEEETTTSSEEEEEE-T------TT--EEEEEEETT--EEEEEESSSSEEEEEET
T ss_pred             CccEEecCCC-EEEEeCCCCCcEEEEEEECCCCcEEEEEECC------ccccceeEEEECC--EEEEEEecCCeEEEEcc
Confidence            4467886556 7777777766  7999999999876544322      1112234444433  24444456789999999


Q ss_pred             CCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCC----CceeEEEEeCCCcEEEEEeC
Q psy17682        246 GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEG----SKATRAIYLKSGLIFTTGFS  321 (490)
Q Consensus       246 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~l~~~~~  321 (490)
                      .+.+.+.++. ..+.=..++  .+++.|+.......|+.+|..+.+...++.....    ..+..+.|- +|.+.|--- 
T Consensus       118 ~tl~~~~~~~-y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW-  192 (264)
T PF05096_consen  118 NTLKKIGTFP-YPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVW-  192 (264)
T ss_dssp             TTTEEEEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEET-
T ss_pred             ccceEEEEEe-cCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeC-
Confidence            9999998887 345566777  4677788887788999999998887777663221    124556665 677666554 


Q ss_pred             CCceeEEEEecCCCCCCCeEEEe------c-------cCCCceeeeeecCCCCeEEEEec
Q psy17682        322 KMSERQYSLRAPDHLDEPIVMVE------L-------DTSNGVMFPLYDPDTNLVYLCGK  368 (490)
Q Consensus       322 ~~~~~~i~iwd~~~~~~~~~~~~------~-------~~~~~i~~~~~s~~~~~l~~~g~  368 (490)
                        ....|...|..++.....+..      .       ....-.+.+++.|..+.+++||-
T Consensus       193 --~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK  250 (264)
T PF05096_consen  193 --QTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGK  250 (264)
T ss_dssp             --TSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEET
T ss_pred             --CCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeC
Confidence              344566667776653221110      0       01234688999999999989883

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.53  E-value=0.013  Score=43.91  Aligned_cols=101  Identities=15%  Similarity=0.152  Sum_probs=67.0

Q ss_pred             EEEEEEe---eCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee
Q psy17682        218 VGLVLWH---PTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEE  294 (490)
Q Consensus       218 v~~~~~~---p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  294 (490)
                      |+++++.   .+|.+-|++|+.|..||+|+-  .+.+.++. ..+.|.+++-... ..++.+..+|+|-+|+-.  ..+.
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~--~RlW   75 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG--DEIVAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDRS--QRLW   75 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeC--CcEEEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeCc--ceee
Confidence            4555554   456678999999999999984  46777777 4567888887765 678999999999999752  3333


Q ss_pred             eeeecCCCceeEEEE-eCCC---cEEEEEeCCCceeEEE
Q psy17682        295 EAVCHEGSKATRAIY-LKSG---LIFTTGFSKMSERQYS  329 (490)
Q Consensus       295 ~~~~~~~~~~~~~~~-s~~~---~~l~~~~~~~~~~~i~  329 (490)
                      ..+...  .+.++.+ ..++   .-|++|-   .+|.|-
T Consensus        76 RiKSK~--~~~~~~~~D~~gdG~~eLI~Gw---snGkve  109 (111)
T PF14783_consen   76 RIKSKN--QVTSMAFYDINGDGVPELIVGW---SNGKVE  109 (111)
T ss_pred             eeccCC--CeEEEEEEcCCCCCceEEEEEe---cCCeEE
Confidence            443322  2555544 3332   2566665   455553

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=97.50  E-value=0.086  Score=49.26  Aligned_cols=164  Identities=16%  Similarity=0.204  Sum_probs=82.1

Q ss_pred             cccCEEEEEEeeCCCCEEEEEeC---CC-cEEEEECCC-CeeEEEEecC--CCcEEEEEEcCCCCEEEEEe-----CCCe
Q psy17682        214 HQRRVGLVLWHPTAQNVLLTAGS---DN-NVAIWNVGT-GEIMIQIECH--PDIVYSASWNWDGSKLLTTC-----KDKK  281 (490)
Q Consensus       214 ~~~~v~~~~~~p~~~~~l~s~~~---dg-~v~iwd~~~-~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~-----~dg~  281 (490)
                      ....+..+.|+|..+.+|+-|-+   +. .-|||-+++ +.....+..+  ...+..=-|.|||..|.--+     .+..
T Consensus       186 ~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~  265 (386)
T PF14583_consen  186 DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFW  265 (386)
T ss_dssp             ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EE
T ss_pred             cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceE
Confidence            45567889999998766666543   22 136665542 3333333322  23345556899998666533     2446


Q ss_pred             EEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCC-C------------ceeEEEEecCCCCCCCeEEEe----
Q psy17682        282 MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSK-M------------SERQYSLRAPDHLDEPIVMVE----  344 (490)
Q Consensus       282 i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~-~------------~~~~i~iwd~~~~~~~~~~~~----  344 (490)
                      |.-+|+.+++........   .......++||++++.-+.+ .            .+..|+++++...... .+..    
T Consensus       266 i~~~d~~t~~~~~~~~~p---~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~-~l~~h~~s  341 (386)
T PF14583_consen  266 IAGYDPDTGERRRLMEMP---WCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFR-KLARHDTS  341 (386)
T ss_dssp             EEEE-TTT--EEEEEEE----SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEE-EEEE----
T ss_pred             EEeeCCCCCCceEEEeCC---ceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCcee-eeeeccCc
Confidence            888888887654333221   25566678899988753321 0            1225667777654321 1111    


Q ss_pred             ---ccCCCc--eeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        345 ---LDTSNG--VMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       345 ---~~~~~~--i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                         ..+...  =..+.|+|||++++.++...|...||-+.-.
T Consensus       342 w~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v~i~  383 (386)
T PF14583_consen  342 WKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYLVEIP  383 (386)
T ss_dssp             ---BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEEEE--
T ss_pred             ceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEEEEeCc
Confidence               111111  2467999999999999988998888866543

>smart00320 WD40 WD40 repeats

Probab=97.49  E-value=0.00049  Score=40.65  Aligned_cols=39  Identities=23%  Similarity=0.434  Sum_probs=34.2

Q ss_pred             CeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy17682        248 GEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIIN  286 (490)
Q Consensus       248 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd  286 (490)
                      ++++..+..|...|.++.|++++..+++++.|+.+++|+
T Consensus         2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            345667778889999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.49  E-value=0.013  Score=60.26  Aligned_cols=145  Identities=12%  Similarity=0.123  Sum_probs=96.2

Q ss_pred             CCCEEEEE-eCCCcEEEEECCCCeeEEEEecCCCc-EEEEEEcC-----CCCEEEEEeCCCeEEEEeCCCCc--eeee-e
Q psy17682        227 AQNVLLTA-GSDNNVAIWNVGTGEIMIQIECHPDI-VYSASWNW-----DGSKLLTTCKDKKMRIINPRTGA--IEEE-A  296 (490)
Q Consensus       227 ~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~~-----~~~~l~~~~~dg~i~iwd~~~~~--~~~~-~  296 (490)
                      ..++|+.- .....|+-.|+..|+.+.....+... |..++-..     +....+.|-.+..+..||.|-..  ++.. .
T Consensus       492 d~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~  571 (794)
T PF08553_consen  492 DRNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQS  571 (794)
T ss_pred             ccceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccc
Confidence            33454443 34578999999999999999876644 55554321     23355677778999999999643  2211 1


Q ss_pred             -eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEE
Q psy17682        297 -VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRY  375 (490)
Q Consensus       297 -~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~i  375 (490)
                       .-..+...+|++-+.+|.+. +|+   .+|.|++||--....  .....+-..+|..+..+.||++|++|+  +..+.+
T Consensus       572 k~Y~~~~~Fs~~aTt~~G~ia-vgs---~~G~IRLyd~~g~~A--KT~lp~lG~pI~~iDvt~DGkwilaTc--~tyLlL  643 (794)
T PF08553_consen  572 KQYSSKNNFSCFATTEDGYIA-VGS---NKGDIRLYDRLGKRA--KTALPGLGDPIIGIDVTADGKWILATC--KTYLLL  643 (794)
T ss_pred             cccccCCCceEEEecCCceEE-EEe---CCCcEEeecccchhh--hhcCCCCCCCeeEEEecCCCcEEEEee--cceEEE
Confidence             11223347888888888654 555   689999999543221  111123357899999999999997665  778888


Q ss_pred             EEec
Q psy17682        376 FEIT  379 (490)
Q Consensus       376 wd~~  379 (490)
                      ++..
T Consensus       644 i~t~  647 (794)
T PF08553_consen  644 IDTL  647 (794)
T ss_pred             EEEe
Confidence            8864

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.43  E-value=0.025  Score=54.74  Aligned_cols=170  Identities=15%  Similarity=0.201  Sum_probs=87.8

Q ss_pred             cEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee--ecCCC----ceeEEEEeCC
Q psy17682        239 NVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV--CHEGS----KATRAIYLKS  312 (490)
Q Consensus       239 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~----~~~~~~~s~~  312 (490)
                      .|+||+. .|+.+.++.-..+.+.++.|+.+ ..|++...||.+++||+.... ...+.  .....    .+....+..+
T Consensus        62 ~I~iys~-sG~ll~~i~w~~~~iv~~~wt~~-e~LvvV~~dG~v~vy~~~G~~-~fsl~~~i~~~~v~e~~i~~~~~~~~  138 (410)
T PF04841_consen   62 SIQIYSS-SGKLLSSIPWDSGRIVGMGWTDD-EELVVVQSDGTVRVYDLFGEF-QFSLGEEIEEEKVLECRIFAIWFYKN  138 (410)
T ss_pred             EEEEECC-CCCEeEEEEECCCCEEEEEECCC-CeEEEEEcCCEEEEEeCCCce-eechhhhccccCcccccccccccCCC
Confidence            5999996 57777777655589999999975 456666789999999987333 11111  01111    1112233345


Q ss_pred             CcEEEEEeCCCceeEEEEecCCCCCCCeEEEec-------cCCCceee-eeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682        313 GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-------DTSNGVMF-PLYDPDTNLVYLCGKGDSVIRYFEITAEPPF  384 (490)
Q Consensus       313 ~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-------~~~~~i~~-~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~  384 (490)
                      |-.+.++.    ...+.+-+.............       ........ ..++.+.... +....++.+.+.+-...+  
T Consensus       139 GivvLt~~----~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~-i~~~~g~~i~~i~~~~~~--  211 (410)
T PF04841_consen  139 GIVVLTGN----NRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVE-ILLANGETIYIIDENSFK--  211 (410)
T ss_pred             CEEEECCC----CeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceE-EEEecCCEEEEEEccccc--
Confidence            65555542    223333333221110011010       00011111 2344444433 222334445533332211  


Q ss_pred             eEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecC
Q psy17682        385 VHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNN  423 (490)
Q Consensus       385 ~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~  423 (490)
                        .   ....+++..++.||++++++.-.+.+++|.+..
T Consensus       212 --~---i~~~~~i~~iavSpng~~iAl~t~~g~l~v~ss  245 (410)
T PF04841_consen  212 --Q---IDSDGPIIKIAVSPNGKFIALFTDSGNLWVVSS  245 (410)
T ss_pred             --c---ccCCCCeEEEEECCCCCEEEEEECCCCEEEEEC
Confidence              1   223458999999999998887766666766654

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>KOG4640|consensus

Probab=97.42  E-value=0.0007  Score=65.23  Aligned_cols=94  Identities=16%  Similarity=0.297  Sum_probs=74.4

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEE-EEEEeeCCCCEEEEEeCCCcEEEE
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVG-LVLWHPTAQNVLLTAGSDNNVAIW  243 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~p~~~~~l~s~~~dg~v~iw  243 (490)
                      ...|.-+.|+|.- .++|.+..+|.|.++.+. .+.+.+++.       +...++ +++|.|||+ +|+.|-.||+|++.
T Consensus        20 ~~~i~~~ewnP~~-dLiA~~t~~gelli~R~n-~qRlwtip~-------p~~~v~~sL~W~~DGk-llaVg~kdG~I~L~   89 (665)
T KOG4640|consen   20 PINIKRIEWNPKM-DLIATRTEKGELLIHRLN-WQRLWTIPI-------PGENVTASLCWRPDGK-LLAVGFKDGTIRLH   89 (665)
T ss_pred             ccceEEEEEcCcc-chhheeccCCcEEEEEec-cceeEeccC-------CCCccceeeeecCCCC-EEEEEecCCeEEEE
Confidence            3467889999976 799999999999999886 555555442       556666 999999995 99999999999999


Q ss_pred             ECCCCeeEEEEe-cCCCcEEEEEEcC
Q psy17682        244 NVGTGEIMIQIE-CHPDIVYSASWNW  268 (490)
Q Consensus       244 d~~~~~~~~~~~-~~~~~v~~~~~~~  268 (490)
                      |..++..+..+. .....|.++-|.+
T Consensus        90 Dve~~~~l~~~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   90 DVEKGGRLVSFLFSVETDISKGIWDR  115 (665)
T ss_pred             EccCCCceeccccccccchheeeccc
Confidence            999998777632 2456677888863

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=97.40  E-value=0.13  Score=49.15  Aligned_cols=146  Identities=11%  Similarity=0.054  Sum_probs=77.7

Q ss_pred             CCeeEEEECCCCCCEEEEEe-----------CCC-cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEE
Q psy17682        166 GPVLDIAWSPHDDNVIASGS-----------EDC-VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLT  233 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~-----------~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s  233 (490)
                      .....|+|.++| +++++-.           ..+ .|.+++-.++.-...   ....+...-.....+++.+++  ++++
T Consensus        14 ~~P~~ia~d~~G-~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d---~~~vfa~~l~~p~Gi~~~~~G--lyV~   87 (367)
T TIGR02604        14 RNPIAVCFDERG-RLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYD---KSNVFAEELSMVTGLAVAVGG--VYVA   87 (367)
T ss_pred             CCCceeeECCCC-CEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcc---eeEEeecCCCCccceeEecCC--EEEe
Confidence            456688999988 5555542           223 677776443221110   001121123346889998886  4444


Q ss_pred             EeCCCcEEEEECCCC-----e--eE-EEEec----CCCcEEEEEEcCCCCEEEEEeCC-------------------CeE
Q psy17682        234 AGSDNNVAIWNVGTG-----E--IM-IQIEC----HPDIVYSASWNWDGSKLLTTCKD-------------------KKM  282 (490)
Q Consensus       234 ~~~dg~v~iwd~~~~-----~--~~-~~~~~----~~~~v~~~~~~~~~~~l~~~~~d-------------------g~i  282 (490)
                       ......++.|....     +  .+ ..+..    +......++|.|||.+.++.+..                   |.|
T Consensus        88 -~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i  166 (367)
T TIGR02604        88 -TPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGL  166 (367)
T ss_pred             -CCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceE
Confidence             34333333344211     1  11 12222    23447789999999877655521                   445


Q ss_pred             EEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEe
Q psy17682        283 RIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       283 ~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~  320 (490)
                      .-+|...++......+..  ....++|+++|+++++-.
T Consensus       167 ~r~~pdg~~~e~~a~G~r--np~Gl~~d~~G~l~~tdn  202 (367)
T TIGR02604       167 FRYNPDGGKLRVVAHGFQ--NPYGHSVDSWGDVFFCDN  202 (367)
T ss_pred             EEEecCCCeEEEEecCcC--CCccceECCCCCEEEEcc
Confidence            666665544322112222  267899999999887643

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>KOG2395|consensus

Probab=97.40  E-value=0.0091  Score=56.71  Aligned_cols=141  Identities=12%  Similarity=0.118  Sum_probs=94.2

Q ss_pred             EEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCC-------EEEEEeCCCeEEEEeCCCCce--eeeeeec-
Q psy17682        230 VLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS-------KLLTTCKDKKMRIINPRTGAI--EEEAVCH-  299 (490)
Q Consensus       230 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~dg~i~iwd~~~~~~--~~~~~~~-  299 (490)
                      +|.++.....++-.|++.|+.+...+-+.. |.-+.+.|+.+       .-+.|-.|..|.-||.|-...  +....+| 
T Consensus       348 il~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kq  426 (644)
T KOG2395|consen  348 ILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQ  426 (644)
T ss_pred             EeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccc
Confidence            455666667788899999999999886655 77777877553       234556788899999984322  1111222 


Q ss_pred             --CCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEE
Q psy17682        300 --EGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFE  377 (490)
Q Consensus       300 --~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd  377 (490)
                        .+....|.+-..+|.++ +|+   .+|.|++||.-.......+  .+-..+|..+..+.+|++|++|+  +.++.+-+
T Consensus       427 y~~k~nFsc~aTT~sG~Iv-vgS---~~GdIRLYdri~~~AKTAl--PgLG~~I~hVdvtadGKwil~Tc--~tyLlLi~  498 (644)
T KOG2395|consen  427 YSTKNNFSCFATTESGYIV-VGS---LKGDIRLYDRIGRRAKTAL--PGLGDAIKHVDVTADGKWILATC--KTYLLLID  498 (644)
T ss_pred             cccccccceeeecCCceEE-Eee---cCCcEEeehhhhhhhhhcc--cccCCceeeEEeeccCcEEEEec--ccEEEEEE
Confidence              12235666666677555 555   6999999997432221122  23446799999999999996554  77888887


Q ss_pred             ec
Q psy17682        378 IT  379 (490)
Q Consensus       378 ~~  379 (490)
                      +.
T Consensus       499 t~  500 (644)
T KOG2395|consen  499 TL  500 (644)
T ss_pred             Ee
Confidence            75

>KOG3630|consensus

Probab=97.31  E-value=0.076  Score=55.41  Aligned_cols=150  Identities=13%  Similarity=0.082  Sum_probs=94.6

Q ss_pred             CCeeEEEECCCCCCEE--EEEeCCCcEEEEECCCCCcccccc-ccee---eecccccCEEEEEEeeCCCCEEEEEeCCCc
Q psy17682        166 GPVLDIAWSPHDDNVI--ASGSEDCVVKVWQIPDGGISRTLT-EPVV---DLLYHQRRVGLVLWHPTAQNVLLTAGSDNN  239 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l--~s~~~dg~i~iwd~~~~~~~~~~~-~~~~---~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~  239 (490)
                      -++..+...+|+ ...  +..+.+-.|..||+++-....... .|..   ..........++.|+|.-....+....|+.
T Consensus       101 ~pi~~~v~~~D~-t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dls  179 (1405)
T KOG3630|consen  101 IPIVIFVCFHDA-TDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLS  179 (1405)
T ss_pred             ccceEEEeccCC-ceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccc
Confidence            355566666665 333  333444578899987543322111 1111   111133456789999986556777888999


Q ss_pred             EEEEECCCCee-EEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee---ecCCCceeEEEEeCCCcE
Q psy17682        240 VAIWNVGTGEI-MIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV---CHEGSKATRAIYLKSGLI  315 (490)
Q Consensus       240 v~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~  315 (490)
                      |++..+..... +..+. .....++++|+|.|+.+++|-..|++.-|-.. .+....+.   ......+.++.|-....+
T Consensus       180 l~V~~~~~~~~~v~s~p-~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~~e~yrvl~v~Wl~t~ef  257 (1405)
T KOG3630|consen  180 LRVKSTKQLAQNVTSFP-VTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEENYRVLSVTWLSTQEF  257 (1405)
T ss_pred             hhhhhhhhhhhhhcccC-cccceeeEEeccccceeeEecCCCeEEEeecc-cceeecccCCCcCCCcceeEEEEecceeE
Confidence            99987754332 22333 46678999999999999999999999988754 33333333   222345889999877766


Q ss_pred             EEE
Q psy17682        316 FTT  318 (490)
Q Consensus       316 l~~  318 (490)
                      +++
T Consensus       258 lvv  260 (1405)
T KOG3630|consen  258 LVV  260 (1405)
T ss_pred             EEE
Confidence            654

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=97.25  E-value=0.23  Score=48.48  Aligned_cols=60  Identities=12%  Similarity=0.262  Sum_probs=42.0

Q ss_pred             eeeecCCCCeEEEEecCCCeEEEEEecCCCC-eeEEeeeeeCCCceeeEEEeeCceeEEeec
Q psy17682        353 FPLYDPDTNLVYLCGKGDSVIRYFEITAEPP-FVHYINTFQTPDPQRGIGMMPKRGCDVNSC  413 (490)
Q Consensus       353 ~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~  413 (490)
                      -++|+|..+.++++...-+.|.||.+..... -++.+ .+...+.-.+++|-.|+.+++.-+
T Consensus       343 liAfn~kaq~VAVASNTcn~ilVYSv~~s~mPniQqI-qLe~~ERPKGiCFltdklLLilVG  403 (671)
T PF15390_consen  343 LIAFNPKAQVVAVASNTCNIILVYSVTPSSMPNIQQI-QLESNERPKGICFLTDKLLLILVG  403 (671)
T ss_pred             eeeeCCcCCEEEEEecCCcEEEEEEeccccCCCeeEE-EcccCCCCceeeEccCCeEEEEec
Confidence            4799999999966666667899999876431 12222 234456778999999987766543

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.24  E-value=0.16  Score=46.75  Aligned_cols=213  Identities=10%  Similarity=0.046  Sum_probs=121.9

Q ss_pred             EEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe
Q psy17682        170 DIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE  249 (490)
Q Consensus       170 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~  249 (490)
                      +..|.++...++.+--..+.|.-|+..+++. ..+.        +.+.+.++.....+. .|+++..  -+.+++.+++.
T Consensus        29 gP~w~~~~~~L~w~DI~~~~i~r~~~~~g~~-~~~~--------~p~~~~~~~~~d~~g-~Lv~~~~--g~~~~~~~~~~   96 (307)
T COG3386          29 GPVWDPDRGALLWVDILGGRIHRLDPETGKK-RVFP--------SPGGFSSGALIDAGG-RLIACEH--GVRLLDPDTGG   96 (307)
T ss_pred             CccCcCCCCEEEEEeCCCCeEEEecCCcCce-EEEE--------CCCCcccceeecCCC-eEEEEcc--ccEEEeccCCc
Confidence            3457777655777777778888888775543 2221        334445555444443 4555433  36667776665


Q ss_pred             eEEEEe-----cCCCcEEEEEEcCCCCEEEEEeC-----------CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCC
Q psy17682        250 IMIQIE-----CHPDIVYSASWNWDGSKLLTTCK-----------DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG  313 (490)
Q Consensus       250 ~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~  313 (490)
                      .+..+.     ......+.+...|+|.+.++...           -|.|+.+|. .+...+.+..+-. ....++||||+
T Consensus        97 ~~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~-~~NGla~SpDg  174 (307)
T COG3386          97 KITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLT-IPNGLAFSPDG  174 (307)
T ss_pred             eeEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEE-ecCceEECCCC
Confidence            533332     11244667888999987665443           134555554 4554444443222 36889999999


Q ss_pred             cEEEEEeCCCceeEEEEecCCC--CC--CCeEEEecc-CCCceeeeeecCCCCeEEEEecCCC-eEEEEEecCCCCeeEE
Q psy17682        314 LIFTTGFSKMSERQYSLRAPDH--LD--EPIVMVELD-TSNGVMFPLYDPDTNLVYLCGKGDS-VIRYFEITAEPPFVHY  387 (490)
Q Consensus       314 ~~l~~~~~~~~~~~i~iwd~~~--~~--~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~g~~dg-~i~iwd~~~~~~~~~~  387 (490)
                      +.|.....  ..+.|..+++..  ..  ......... .....-.++...+|.+. +++..+| .|.+|+.. ++    .
T Consensus       175 ~tly~aDT--~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw-~~a~~~g~~v~~~~pd-G~----l  246 (307)
T COG3386         175 KTLYVADT--PANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLW-VAAVWGGGRVVRFNPD-GK----L  246 (307)
T ss_pred             CEEEEEeC--CCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEE-EecccCCceEEEECCC-Cc----E
Confidence            87776642  346777776652  11  111111111 22334556777788776 3443443 89999988 65    3


Q ss_pred             eeeeeCC-CceeeEEEee
Q psy17682        388 INTFQTP-DPQRGIGMMP  404 (490)
Q Consensus       388 ~~~~~~~-~~i~~~~~sp  404 (490)
                      +..+.-+ ..+++++|--
T Consensus       247 ~~~i~lP~~~~t~~~FgG  264 (307)
T COG3386         247 LGEIKLPVKRPTNPAFGG  264 (307)
T ss_pred             EEEEECCCCCCccceEeC
Confidence            3334443 5678888874

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.23  E-value=0.054  Score=47.98  Aligned_cols=166  Identities=17%  Similarity=0.147  Sum_probs=108.5

Q ss_pred             cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCC
Q psy17682        256 CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDH  335 (490)
Q Consensus       256 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~  335 (490)
                      +....+.++.|+|+.+.|++......-.++=...|+.++++.-..-...-.+.+..+|++.++--   +++.+.++.+..
T Consensus        83 g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dE---R~~~l~~~~vd~  159 (316)
T COG3204          83 GETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDE---RDRALYLFTVDA  159 (316)
T ss_pred             cccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEeh---hcceEEEEEEcC
Confidence            44555999999999999998888887777777778888888733322356777888887777654   677788777665


Q ss_pred             CCCCeE-------EEeccC-CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEE-ee-eeeC-----CCceeeE
Q psy17682        336 LDEPIV-------MVELDT-SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHY-IN-TFQT-----PDPQRGI  400 (490)
Q Consensus       336 ~~~~~~-------~~~~~~-~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~-~~-~~~~-----~~~i~~~  400 (490)
                      ......       +....+ ..+.-.++|+|..+.+++ .-.-.=+.||.+.....-... .. ....     -..+.++
T Consensus       160 ~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~-aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl  238 (316)
T COG3204         160 DTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFV-AKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGL  238 (316)
T ss_pred             CccEEeccceEEeccccCCCCcCceeeecCCCCceEEE-EEccCCcEEEEEecCCcccccccccCcccccceEeeccccc
Confidence            432111       111122 456788999999998855 455666777777644311110 00 0000     1246778


Q ss_pred             EEee-CceeEEeecceeEEEEecCCC
Q psy17682        401 GMMP-KRGCDVNSCEIGRFFRLNNSG  425 (490)
Q Consensus       401 ~~sp-~~~~l~~~~~~~~~~~~~~~~  425 (490)
                      .|.+ .+.++|-+.+.-++..++..+
T Consensus       239 ~~~~~~~~LLVLS~ESr~l~Evd~~G  264 (316)
T COG3204         239 EFNAITNSLLVLSDESRRLLEVDLSG  264 (316)
T ss_pred             eecCCCCcEEEEecCCceEEEEecCC
Confidence            8886 567888888877777777655

>KOG4441|consensus

Probab=97.22  E-value=0.053  Score=54.76  Aligned_cols=190  Identities=13%  Similarity=0.119  Sum_probs=104.2

Q ss_pred             CEEEEEeCCC------cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC------CcEEEEECC
Q psy17682        179 NVIASGSEDC------VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD------NNVAIWNVG  246 (490)
Q Consensus       179 ~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d------g~v~iwd~~  246 (490)
                      .+++.||.++      .+..||..++.-.....     +. +...-.+++...+  .+.++||.|      ..+..||.+
T Consensus       286 ~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~-----m~-~~r~~~~~~~~~~--~lYv~GG~~~~~~~l~~ve~YD~~  357 (571)
T KOG4441|consen  286 KLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAP-----MP-SPRCRVGVAVLNG--KLYVVGGYDSGSDRLSSVERYDPR  357 (571)
T ss_pred             eEEEECCCCCCCcccceeEEecCCcCcEeecCC-----CC-cccccccEEEECC--EEEEEccccCCCcccceEEEecCC
Confidence            6777777763      67788877664322211     11 2223344555543  488999998      357788888


Q ss_pred             CCeeEE--EEecCCCcEEEEEEcCCCCEEEEEeCCCe-----EEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682        247 TGEIMI--QIECHPDIVYSASWNWDGSKLLTTCKDKK-----MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG  319 (490)
Q Consensus       247 ~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-----i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~  319 (490)
                      ..+-..  .+............  +|...++|+.||.     +-.||..+.+-...-.-.. .........-+|++.++|
T Consensus       358 ~~~W~~~a~M~~~R~~~~v~~l--~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~-~r~~~gv~~~~g~iYi~G  434 (571)
T KOG4441|consen  358 TNQWTPVAPMNTKRSDFGVAVL--DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLT-RRSGHGVAVLGGKLYIIG  434 (571)
T ss_pred             CCceeccCCccCccccceeEEE--CCEEEEEeccccccccccEEEecCCCCcccccCCCCc-ceeeeEEEEECCEEEEEc
Confidence            766322  11111111111222  6888899998864     7778877654221111111 112333344578888888


Q ss_pred             eCCCce---eEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC-----eEEEEEecCCC
Q psy17682        320 FSKMSE---RQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS-----VIRYFEITAEP  382 (490)
Q Consensus       320 ~~~~~~---~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg-----~i~iwd~~~~~  382 (490)
                      +.++..   ..+..||..+..-... ........-..++.  -+..||+.|+.|+     .|..||..+.+
T Consensus       435 G~~~~~~~l~sve~YDP~t~~W~~~-~~M~~~R~~~g~a~--~~~~iYvvGG~~~~~~~~~VE~ydp~~~~  502 (571)
T KOG4441|consen  435 GGDGSSNCLNSVECYDPETNTWTLI-APMNTRRSGFGVAV--LNGKIYVVGGFDGTSALSSVERYDPETNQ  502 (571)
T ss_pred             CcCCCccccceEEEEcCCCCceeec-CCcccccccceEEE--ECCEEEEECCccCCCccceEEEEcCCCCc
Confidence            755544   6788999887542111 11111111111221  2456668888776     36778888765

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=97.22  E-value=0.033  Score=50.90  Aligned_cols=152  Identities=14%  Similarity=0.116  Sum_probs=93.2

Q ss_pred             CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEE-----
Q psy17682        269 DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMV-----  343 (490)
Q Consensus       269 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~-----  343 (490)
                      .++.|+.|+.+| +++++..............  .+..+...++-..+++-+    |+.+.++++..........     
T Consensus         6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~~--~I~ql~vl~~~~~llvLs----d~~l~~~~L~~l~~~~~~~~~~~~   78 (275)
T PF00780_consen    6 WGDRLLVGTEDG-LYVYDLSDPSKPTRILKLS--SITQLSVLPELNLLLVLS----DGQLYVYDLDSLEPVSTSAPLAFP   78 (275)
T ss_pred             CCCEEEEEECCC-EEEEEecCCccceeEeecc--eEEEEEEecccCEEEEEc----CCccEEEEchhhcccccccccccc
Confidence            578899999888 9999994333333332222  288898888877666664    7899999988654433110     


Q ss_pred             -------eccCCCceeeee--ecCCCCeEEEEecCCCeEEEEEecCCCCee-EEeeeeeCCCceeeEEEeeCceeEEeec
Q psy17682        344 -------ELDTSNGVMFPL--YDPDTNLVYLCGKGDSVIRYFEITAEPPFV-HYINTFQTPDPQRGIGMMPKRGCDVNSC  413 (490)
Q Consensus       344 -------~~~~~~~i~~~~--~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~i~~~~~sp~~~~l~~~~  413 (490)
                             ......++...+  -...+...+++ .....|.+|.......-. .....+.-+..+..++|.++. ++++..
T Consensus        79 ~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~v-a~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~~~~-i~v~~~  156 (275)
T PF00780_consen   79 KSRSLPTKLPETKGVSFFAVNGGHEGSRRLCV-AVKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFLGNK-ICVGTS  156 (275)
T ss_pred             ccccccccccccCCeeEEeeccccccceEEEE-EECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEeCCE-EEEEeC
Confidence                   122223344444  12233333233 345589999998753222 455667777899999999553 444445


Q ss_pred             ceeEEEEecCCCceEEE
Q psy17682        414 EIGRFFRLNNSGLCQVV  430 (490)
Q Consensus       414 ~~~~~~~~~~~~~~~~i  430 (490)
                      +...+.++.++. ..++
T Consensus       157 ~~f~~idl~~~~-~~~l  172 (275)
T PF00780_consen  157 KGFYLIDLNTGS-PSEL  172 (275)
T ss_pred             CceEEEecCCCC-ceEE
Confidence            566888888666 3433

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.16  E-value=0.15  Score=45.23  Aligned_cols=193  Identities=8%  Similarity=0.046  Sum_probs=116.9

Q ss_pred             ccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy17682        213 YHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-HPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGA  291 (490)
Q Consensus       213 ~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  291 (490)
                      +-...+.++.|+|+.+ .|++......-.|+=-.+|+.+.++.- .-.....+.+..++++.++--.++.+.++.+....
T Consensus        83 g~~~nvS~LTynp~~r-tLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t  161 (316)
T COG3204          83 GETANVSSLTYNPDTR-TLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADT  161 (316)
T ss_pred             cccccccceeeCCCcc-eEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCc
Confidence            3455699999999986 566666666666776678898888761 12334567888788888887788888888776553


Q ss_pred             eeee-----ee----ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe-ccC-------CCceeee
Q psy17682        292 IEEE-----AV----CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE-LDT-------SNGVMFP  354 (490)
Q Consensus       292 ~~~~-----~~----~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~-~~~-------~~~i~~~  354 (490)
                      ....     +.    .+.+.-.-.++|+|....|..+-   ...-+.||............. ..+       -..+.++
T Consensus       162 ~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aK---Er~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl  238 (316)
T COG3204         162 TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAK---ERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGL  238 (316)
T ss_pred             cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEE---ccCCcEEEEEecCCcccccccccCcccccceEeeccccc
Confidence            2211     11    22233378899999987777775   334455554443221111111 011       1246788


Q ss_pred             eecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC-------CceeeEEEeeCceeEEe
Q psy17682        355 LYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP-------DPQRGIGMMPKRGCDVN  411 (490)
Q Consensus       355 ~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~-------~~i~~~~~sp~~~~l~~  411 (490)
                      .|++....|++-+..++.+.-.|....-  ...+....+.       ...-+++..++|.+-++
T Consensus       239 ~~~~~~~~LLVLS~ESr~l~Evd~~G~~--~~~lsL~~g~~gL~~dipqaEGiamDd~g~lYIv  300 (316)
T COG3204         239 EFNAITNSLLVLSDESRRLLEVDLSGEV--IELLSLTKGNHGLSSDIPQAEGIAMDDDGNLYIV  300 (316)
T ss_pred             eecCCCCcEEEEecCCceEEEEecCCCe--eeeEEeccCCCCCcccCCCcceeEECCCCCEEEE
Confidence            8998777776888888888777776542  2233222211       11345666666654343

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.14  E-value=0.056  Score=54.66  Aligned_cols=191  Identities=17%  Similarity=0.183  Sum_probs=101.4

Q ss_pred             cCCeeEEEECCCCCCEEEEEe-----CCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC--
Q psy17682        165 KGPVLDIAWSPHDDNVIASGS-----EDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD--  237 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d--  237 (490)
                      ...+...+++|+|....++..     .|+.-.||-...+.....+      .  .....+.-.|+|+|+ .+++....  
T Consensus       349 ~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~l------t--~g~~~t~PsWspDG~-~lw~v~dg~~  419 (591)
T PRK13616        349 MGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQV------L--EGHSLTRPSWSLDAD-AVWVVVDGNT  419 (591)
T ss_pred             ccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceee------e--cCCCCCCceECCCCC-ceEEEecCcc
Confidence            346789999999954444442     3444455543323222221      1  122378889999976 44444322  


Q ss_pred             ----------CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEE---EeCCCCce-e---eeeeecC
Q psy17682        238 ----------NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRI---INPRTGAI-E---EEAVCHE  300 (490)
Q Consensus       238 ----------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i---wd~~~~~~-~---~~~~~~~  300 (490)
                                +.+.+.+++.++...   .....|..+.|+|||..++... ++.|++   -....+.. +   ..+....
T Consensus       420 ~~~v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l  495 (591)
T PRK13616        420 VVRVIRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGL  495 (591)
T ss_pred             eEEEeccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeeccc
Confidence                      233333444333322   2356799999999999888776 477777   44344431 1   1121112


Q ss_pred             CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEE
Q psy17682        301 GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIR  374 (490)
Q Consensus       301 ~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~  374 (490)
                      ......+.|..++.++ ++..+ .+..+...++....... .........+..++-+++  .+|+ ...++.+.
T Consensus       496 ~~~~~~l~W~~~~~L~-V~~~~-~~~~v~~v~vDG~~~~~-~~~~n~~~~v~~vaa~~~--~iyv-~~~~g~~~  563 (591)
T PRK13616        496 GDTAVSLDWRTGDSLV-VGRSD-PEHPVWYVNLDGSNSDA-LPSRNLSAPVVAVAASPS--TVYV-TDARAVLQ  563 (591)
T ss_pred             CCccccceEecCCEEE-EEecC-CCCceEEEecCCccccc-cCCCCccCceEEEecCCc--eEEE-EcCCceEE
Confidence            2225788999999966 44432 34455555555433211 111112345666766653  3433 34555443

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.13  E-value=0.21  Score=45.98  Aligned_cols=222  Identities=15%  Similarity=0.137  Sum_probs=119.5

Q ss_pred             EEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccccc
Q psy17682        127 KEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTE  206 (490)
Q Consensus       127 ~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  206 (490)
                      ..++++--..+.+..|+..     .+    ..+.+... +.+.++..-..+ ..|+++.  .-+.+++.+++.....+..
T Consensus        37 ~~L~w~DI~~~~i~r~~~~-----~g----~~~~~~~p-~~~~~~~~~d~~-g~Lv~~~--~g~~~~~~~~~~~~t~~~~  103 (307)
T COG3386          37 GALLWVDILGGRIHRLDPE-----TG----KKRVFPSP-GGFSSGALIDAG-GRLIACE--HGVRLLDPDTGGKITLLAE  103 (307)
T ss_pred             CEEEEEeCCCCeEEEecCC-----cC----ceEEEECC-CCcccceeecCC-CeEEEEc--cccEEEeccCCceeEEecc
Confidence            4455666667777777663     11    12233222 333444333223 3555543  2466777765554222221


Q ss_pred             ceeeecccccCEEEEEEeeCCCCEEEEEeCC----------CcEEEEECC-CCeeEEEEecCCCcEEEEEEcCCCCEEEE
Q psy17682        207 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD----------NNVAIWNVG-TGEIMIQIECHPDIVYSASWNWDGSKLLT  275 (490)
Q Consensus       207 ~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d----------g~v~iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  275 (490)
                      +....  .....+.+...|+|. +. .+...          ..=.+|.+. .+..+..+..+-..-+.|+||||++.+..
T Consensus       104 ~~~~~--~~~r~ND~~v~pdG~-~w-fgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~  179 (307)
T COG3386         104 PEDGL--PLNRPNDGVVDPDGR-IW-FGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYV  179 (307)
T ss_pred             ccCCC--CcCCCCceeEcCCCC-EE-EeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEE
Confidence            11111  124456788899986 33 33222          011344444 45566656555666789999999987766


Q ss_pred             EeC-CCeEEEEeCCC--Cce----eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC
Q psy17682        276 TCK-DKKMRIINPRT--GAI----EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS  348 (490)
Q Consensus       276 ~~~-dg~i~iwd~~~--~~~----~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~  348 (490)
                      +.. .+.|+-|++..  +..    ............-.++...+|.+.+++..  ..+.|.+|+.+ ++.. ....... 
T Consensus       180 aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~--~g~~v~~~~pd-G~l~-~~i~lP~-  254 (307)
T COG3386         180 ADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVW--GGGRVVRFNPD-GKLL-GEIKLPV-  254 (307)
T ss_pred             EeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEeccc--CCceEEEECCC-CcEE-EEEECCC-
Confidence            654 47888887752  211    11111112223667778888888764431  12389999988 4432 2222232 


Q ss_pred             Cceeeeee-cCCCCeEEEEecCC
Q psy17682        349 NGVMFPLY-DPDTNLVYLCGKGD  370 (490)
Q Consensus       349 ~~i~~~~~-s~~~~~l~~~g~~d  370 (490)
                      ..+++++| .|+.+.||+++...
T Consensus       255 ~~~t~~~FgG~~~~~L~iTs~~~  277 (307)
T COG3386         255 KRPTNPAFGGPDLNTLYITSARS  277 (307)
T ss_pred             CCCccceEeCCCcCEEEEEecCC
Confidence            45666766 45678887777544

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.09  E-value=0.049  Score=55.04  Aligned_cols=178  Identities=10%  Similarity=0.091  Sum_probs=94.1

Q ss_pred             ccCEEEEEEeeCCCCEEEEEe-----CCC--cEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC--------
Q psy17682        215 QRRVGLVLWHPTAQNVLLTAG-----SDN--NVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD--------  279 (490)
Q Consensus       215 ~~~v~~~~~~p~~~~~l~s~~-----~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------  279 (490)
                      ...+.+.+.+|+|+...++..     .|+  .|.+++. .+.. ..+.. ......-.|+|+|+.|++....        
T Consensus       349 ~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~-~~lt~-g~~~t~PsWspDG~~lw~v~dg~~~~~v~~  425 (591)
T PRK13616        349 MGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVA-VQVLE-GHSLTRPSWSLDADAVWVVVDGNTVVRVIR  425 (591)
T ss_pred             ccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcc-eeeec-CCCCCCceECCCCCceEEEecCcceEEEec
Confidence            346789999999974444442     233  4555554 2323 33321 2237889999998877776532        


Q ss_pred             ----CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEE---ecCCCCCCCe-EEEec--cCCC
Q psy17682        280 ----KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSL---RAPDHLDEPI-VMVEL--DTSN  349 (490)
Q Consensus       280 ----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~i---wd~~~~~~~~-~~~~~--~~~~  349 (490)
                          +.+.+.++..++...   ...+ .+..+.|||||..++...    ++.|.+   -....+.... .....  .-..
T Consensus       426 ~~~~gql~~~~vd~ge~~~---~~~g-~Issl~wSpDG~RiA~i~----~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~  497 (591)
T PRK13616        426 DPATGQLARTPVDASAVAS---RVPG-PISELQLSRDGVRAAMII----GGKVYLAVVEQTEDGQYALTNPREVGPGLGD  497 (591)
T ss_pred             cCCCceEEEEeccCchhhh---ccCC-CcCeEEECCCCCEEEEEE----CCEEEEEEEEeCCCCceeecccEEeecccCC
Confidence                233333444333222   1122 499999999999888765    456665   3333332111 00111  1222


Q ss_pred             ceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeC
Q psy17682        350 GVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPK  405 (490)
Q Consensus       350 ~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~  405 (490)
                      .+.++.|..++..++.  ..++...+|.+.-.......+..-....++..++=++.
T Consensus       498 ~~~~l~W~~~~~L~V~--~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~  551 (591)
T PRK13616        498 TAVSLDWRTGDSLVVG--RSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPS  551 (591)
T ss_pred             ccccceEecCCEEEEE--ecCCCCceEEEecCCccccccCCCCccCceEEEecCCc
Confidence            3578999999986633  33444445555432211111111111345666666664

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=97.08  E-value=0.066  Score=51.98  Aligned_cols=184  Identities=13%  Similarity=0.115  Sum_probs=107.5

Q ss_pred             cCEEEEEEeeCCCCEEEEEe--CCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCC----CCEEEEEeCCCeEEEEeCCC
Q psy17682        216 RRVGLVLWHPTAQNVLLTAG--SDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWD----GSKLLTTCKDKKMRIINPRT  289 (490)
Q Consensus       216 ~~v~~~~~~p~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~dg~i~iwd~~~  289 (490)
                      .++..++|. ||+..+++.-  .+|.+++=   +.+.+..|+    .|..+.|.|-    ...+++......|.+|-+.-
T Consensus        20 HPvhGlaWT-DGkqVvLT~L~l~~gE~kfG---ds~viGqFE----hV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~   91 (671)
T PF15390_consen   20 HPVHGLAWT-DGKQVVLTDLQLHNGEPKFG---DSKVIGQFE----HVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCP   91 (671)
T ss_pred             ccccceEec-CCCEEEEEeeeeeCCccccC---CccEeeccc----eeeeeeecCcccCCCCceEEEeccceEEEEEecc
Confidence            468889997 4544555543  23444332   223444444    4889999994    33666677788999998852


Q ss_pred             -----CceeeeeeecCC----CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCC
Q psy17682        290 -----GAIEEEAVCHEG----SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDT  360 (490)
Q Consensus       290 -----~~~~~~~~~~~~----~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~  360 (490)
                           .+.+.....+-.    --...+.|+|...+|++-.   ....-.+++++..... ....+...+-|.+.+|.+||
T Consensus        92 s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT---~~dvSV~~sV~~d~sr-VkaDi~~~G~IhCACWT~DG  167 (671)
T PF15390_consen   92 STTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLT---ARDVSVLPSVHCDSSR-VKADIKTSGLIHCACWTKDG  167 (671)
T ss_pred             CccccccceeeeeeeccCCcccCCCcccccCCCceEEEEe---cCceeEeeeeeeCCce-EEEeccCCceEEEEEecCcC
Confidence                 232222222211    1235677999999888776   2223344555543332 33445666779999999999


Q ss_pred             CeEEEEecCCCeEEEEEecCCCCe-eEEeeeeeCCCceeeEEEeeCceeEEe
Q psy17682        361 NLVYLCGKGDSVIRYFEITAEPPF-VHYINTFQTPDPQRGIGMMPKRGCDVN  411 (490)
Q Consensus       361 ~~l~~~g~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~i~~~~~sp~~~~l~~  411 (490)
                      +.|+++.+..=.-++||-...... ...-..+.-++.|.++.-.-|....++
T Consensus       168 ~RLVVAvGSsLHSyiWd~~qKtL~~CsfcPVFdv~~~Icsi~AT~dsqVAva  219 (671)
T PF15390_consen  168 QRLVVAVGSSLHSYIWDSAQKTLHRCSFCPVFDVGGYICSIEATVDSQVAVA  219 (671)
T ss_pred             CEEEEEeCCeEEEEEecCchhhhhhCCcceeecCCCceEEEEEeccceEEEE
Confidence            998776665556678886543200 011122334456666665555554443

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=96.98  E-value=0.13  Score=46.21  Aligned_cols=148  Identities=12%  Similarity=0.049  Sum_probs=87.7

Q ss_pred             cEEEEEEcCCCCEEEEEe---CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEe-cCCC
Q psy17682        260 IVYSASWNWDGSKLLTTC---KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLR-APDH  335 (490)
Q Consensus       260 ~v~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iw-d~~~  335 (490)
                      .+.+.+++++++.++...   ....++++...  .......  .+..+....|++++.+.+...   .+...+++ +...
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~--~~~~~~~--~g~~l~~PS~d~~g~~W~v~~---~~~~~~~~~~~~~   97 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAG--GPVRPVL--TGGSLTRPSWDPDGWVWTVDD---GSGGVRVVRDSAS   97 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCC--Ccceeec--cCCccccccccCCCCEEEEEc---CCCceEEEEecCC
Confidence            688999999999887766   33446665543  3233222  222478889999988777665   23344444 2222


Q ss_pred             CCCCeEEEeccCCC-ceeeeeecCCCCeEEEEe--cCCCeEEEEEecCCC---C--eeEEeeee-eCCCceeeEEEeeCc
Q psy17682        336 LDEPIVMVELDTSN-GVMFPLYDPDTNLVYLCG--KGDSVIRYFEITAEP---P--FVHYINTF-QTPDPQRGIGMMPKR  406 (490)
Q Consensus       336 ~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~~~g--~~dg~i~iwd~~~~~---~--~~~~~~~~-~~~~~i~~~~~sp~~  406 (490)
                      +............. .|..+.+||||..+++..  ..++.|.+--+....   +  +...+... .....+.+++|.+++
T Consensus        98 g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~  177 (253)
T PF10647_consen   98 GTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDS  177 (253)
T ss_pred             CcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCC
Confidence            22211222222222 799999999999986655  335777777665321   1  11111111 123578999999999


Q ss_pred             eeEEeecc
Q psy17682        407 GCDVNSCE  414 (490)
Q Consensus       407 ~~l~~~~~  414 (490)
                      .+++.+..
T Consensus       178 ~L~V~~~~  185 (253)
T PF10647_consen  178 TLVVLGRS  185 (253)
T ss_pred             EEEEEeCC
Confidence            98887644

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>KOG2079|consensus

Probab=96.97  E-value=0.023  Score=58.65  Aligned_cols=96  Identities=22%  Similarity=0.209  Sum_probs=71.3

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCC
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHP  258 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~  258 (490)
                      ..++.|+..|.+-..|....-.      |...-..-.++|++++|+.+|. +++.|-.+|.|.+||+..++.++.+..|.
T Consensus       100 ~~ivi~Ts~ghvl~~d~~~nL~------~~~~ne~v~~~Vtsvafn~dg~-~l~~G~~~G~V~v~D~~~~k~l~~i~e~~  172 (1206)
T KOG2079|consen  100 VPIVIGTSHGHVLLSDMTGNLG------PLHQNERVQGPVTSVAFNQDGS-LLLAGLGDGHVTVWDMHRAKILKVITEHG  172 (1206)
T ss_pred             eeEEEEcCchhhhhhhhhcccc------hhhcCCccCCcceeeEecCCCc-eeccccCCCcEEEEEccCCcceeeeeecC
Confidence            5788888889999888754311      0001112467899999999996 89999999999999999999998888776


Q ss_pred             CcEEEEE---EcCCCCEEEEEeCCCe
Q psy17682        259 DIVYSAS---WNWDGSKLLTTCKDKK  281 (490)
Q Consensus       259 ~~v~~~~---~~~~~~~l~~~~~dg~  281 (490)
                      .+.+++-   +..++..++++...|.
T Consensus       173 ap~t~vi~v~~t~~nS~llt~D~~Gs  198 (1206)
T KOG2079|consen  173 APVTGVIFVGRTSQNSKLLTSDTGGS  198 (1206)
T ss_pred             CccceEEEEEEeCCCcEEEEccCCCc
Confidence            6655543   4445567888877776

>KOG2395|consensus

Probab=96.92  E-value=0.013  Score=55.71  Aligned_cols=136  Identities=13%  Similarity=0.134  Sum_probs=89.3

Q ss_pred             CCCEE-EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc--------EEEEEeCCCceeEEEEecCCCCCC-
Q psy17682        269 DGSKL-LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL--------IFTTGFSKMSERQYSLRAPDHLDE-  338 (490)
Q Consensus       269 ~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~--------~l~~~~~~~~~~~i~iwd~~~~~~-  338 (490)
                      +.++| .++.....++-.|+..|+.+.+...+..  |..+.+.|+.+        .|+ |-   .+..|.-||++-... 
T Consensus       344 dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d--i~mv~~t~d~K~~Ql~~e~Tlv-GL---s~n~vfriDpRv~~~~  417 (644)
T KOG2395|consen  344 DSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD--INMVDITPDFKFAQLTSEQTLV-GL---SDNSVFRIDPRVQGKN  417 (644)
T ss_pred             ccceEeeCCCCcCcceeeecccceeeeEeeccCC--cceeeccCCcchhcccccccEE-ee---cCCceEEecccccCcc
Confidence            33433 3445556799999999999999887665  77777777632        222 33   477888999985443 


Q ss_pred             CeEEEe---ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecce
Q psy17682        339 PIVMVE---LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEI  415 (490)
Q Consensus       339 ~~~~~~---~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~  415 (490)
                      .+...+   ........+.+-..+| ++ ++|+.+|.||+||- .+..-...+.  ..+.+|..+..+.+|.++++.|++
T Consensus       418 kl~~~q~kqy~~k~nFsc~aTT~sG-~I-vvgS~~GdIRLYdr-i~~~AKTAlP--gLG~~I~hVdvtadGKwil~Tc~t  492 (644)
T KOG2395|consen  418 KLAVVQSKQYSTKNNFSCFATTESG-YI-VVGSLKGDIRLYDR-IGRRAKTALP--GLGDAIKHVDVTADGKWILATCKT  492 (644)
T ss_pred             eeeeeeccccccccccceeeecCCc-eE-EEeecCCcEEeehh-hhhhhhhccc--ccCCceeeEEeeccCcEEEEeccc
Confidence            111111   1222335555555555 55 67899999999997 4332222232  345699999999999999999885

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=96.84  E-value=0.58  Score=48.91  Aligned_cols=204  Identities=11%  Similarity=0.027  Sum_probs=116.1

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceeee--cccccCEEEEEEee----------------CCCCEEEEEeCCCcE
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDL--LYHQRRVGLVLWHP----------------TAQNVLLTAGSDNNV  240 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~p----------------~~~~~l~s~~~dg~v  240 (490)
                      ..++.++.++.|.-.|..+|+.+..+.......  ..| ..+..+.+..                .+ ..++.++.|+.+
T Consensus       195 g~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~-~~cRGvay~~~p~~~~~~~~~~~p~~~~-~rV~~~T~Dg~L  272 (764)
T TIGR03074       195 DTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQH-QTCRGVSYYDAPAAAAGPAAPAAPADCA-RRIILPTSDARL  272 (764)
T ss_pred             CEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccc-ccccceEEecCCcccccccccccccccC-CEEEEecCCCeE
Confidence            467777778888888888888776654321100  001 1122333321                12 367888899999


Q ss_pred             EEEECCCCeeEEEEecCCCcEE-------------EEEEcC--CCCEEEEEeC----------CCeEEEEeCCCCceeee
Q psy17682        241 AIWNVGTGEIMIQIECHPDIVY-------------SASWNW--DGSKLLTTCK----------DKKMRIINPRTGAIEEE  295 (490)
Q Consensus       241 ~iwd~~~~~~~~~~~~~~~~v~-------------~~~~~~--~~~~l~~~~~----------dg~i~iwd~~~~~~~~~  295 (490)
                      .-.|.++|+.+..+.. .+.|.             .+.-.|  .+..+++|+.          +|.|+-+|+++|+.+..
T Consensus       273 iALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~  351 (764)
T TIGR03074       273 IALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWA  351 (764)
T ss_pred             EEEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeE
Confidence            9999999999887642 22221             111222  2345666643          68899999999998877


Q ss_pred             eeecC-----------------CCceeEEEEeCCCcEEEEEeC---------------CCceeEEEEecCCCCCCCeEEE
Q psy17682        296 AVCHE-----------------GSKATRAIYLKSGLIFTTGFS---------------KMSERQYSLRAPDHLDEPIVMV  343 (490)
Q Consensus       296 ~~~~~-----------------~~~~~~~~~s~~~~~l~~~~~---------------~~~~~~i~iwd~~~~~~~~~~~  343 (490)
                      +....                 ...-..++++++..++..+..               +...+.|.-.|.++++..-.++
T Consensus       352 ~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q  431 (764)
T TIGR03074       352 WDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQ  431 (764)
T ss_pred             EecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEec
Confidence            65210                 001133445555444333221               1123455666777766554444


Q ss_pred             eccCCC-------ceeeeeecC-CCC--eEEEEecCCCeEEEEEecCCCCee
Q psy17682        344 ELDTSN-------GVMFPLYDP-DTN--LVYLCGKGDSVIRYFEITAEPPFV  385 (490)
Q Consensus       344 ~~~~~~-------~i~~~~~s~-~~~--~l~~~g~~dg~i~iwd~~~~~~~~  385 (490)
                      ..+|..       ...-+.+.. +|+  .+++.++.+|.++++|-++++++.
T Consensus       432 ~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~  483 (764)
T TIGR03074       432 TVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIV  483 (764)
T ss_pred             ccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEe
Confidence            433321       111122222 553  244788999999999999998554

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=96.84  E-value=0.43  Score=44.76  Aligned_cols=229  Identities=14%  Similarity=0.116  Sum_probs=106.1

Q ss_pred             eEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEee--CCCCEEEEEe-----------
Q psy17682        169 LDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP--TAQNVLLTAG-----------  235 (490)
Q Consensus       169 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~~l~s~~-----------  235 (490)
                      .+..++|++ +.++-......++--|+++.+....+..       ....+-...|..  ++. .++-.-           
T Consensus        84 ~g~~~s~~~-~~~~Yv~~~~~l~~vdL~T~e~~~vy~~-------p~~~~g~gt~v~n~d~t-~~~g~e~~~~d~~~l~~  154 (386)
T PF14583_consen   84 FGGFLSPDD-RALYYVKNGRSLRRVDLDTLEERVVYEV-------PDDWKGYGTWVANSDCT-KLVGIEISREDWKPLTK  154 (386)
T ss_dssp             TT-EE-TTS-SEEEEEETTTEEEEEETTT--EEEEEE---------TTEEEEEEEEE-TTSS-EEEEEEEEGGG-----S
T ss_pred             cceEEecCC-CeEEEEECCCeEEEEECCcCcEEEEEEC-------CcccccccceeeCCCcc-EEEEEEEeehhccCccc
Confidence            356777877 5555444556888889988765433222       334444455543  332 332221           


Q ss_pred             -----------CCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCC-Cceeeeee-
Q psy17682        236 -----------SDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK-----KMRIINPRT-GAIEEEAV-  297 (490)
Q Consensus       236 -----------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~-~~~~~~~~-  297 (490)
                                 -...|.--|+.+|+....+. ....+..+.|+|....+++=+..|     .-|||-+++ +...+.+. 
T Consensus       155 ~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~-~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~  233 (386)
T PF14583_consen  155 WKGFREFYEARPHCRIFTIDLKTGERKVVFE-DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHR  233 (386)
T ss_dssp             HHHHHHHHHC---EEEEEEETTT--EEEEEE-ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS-
T ss_pred             cHHHHHHHhhCCCceEEEEECCCCceeEEEe-cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeec
Confidence                       11235556788877655555 456788999999665555444322     135554443 22222222 


Q ss_pred             ecCCCceeEEEEeCCCcEEEEE--eCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC-----
Q psy17682        298 CHEGSKATRAIYLKSGLIFTTG--FSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD-----  370 (490)
Q Consensus       298 ~~~~~~~~~~~~s~~~~~l~~~--~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d-----  370 (490)
                      ......+..=-|.|||..+..-  ...+.+..|.-+|+.+.+... +...   ......--++||++++-=|+..     
T Consensus       234 ~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~-~~~~---p~~~H~~ss~Dg~L~vGDG~d~p~~v~  309 (386)
T PF14583_consen  234 RMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRR-LMEM---PWCSHFMSSPDGKLFVGDGGDAPVDVA  309 (386)
T ss_dssp             --TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEE-EEEE----SEEEEEE-TTSSEEEEEE--------
T ss_pred             CCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceE-EEeC---CceeeeEEcCCCCEEEecCCCCCcccc
Confidence            1223335556699999866542  233457788888998765422 2221   2345666688998873223321     


Q ss_pred             ----------CeEEEEEecCCCCeeEEeeeee-------CCC--ceeeEEEeeCceeEEeec
Q psy17682        371 ----------SVIRYFEITAEPPFVHYINTFQ-------TPD--PQRGIGMMPKRGCDVNSC  413 (490)
Q Consensus       371 ----------g~i~iwd~~~~~~~~~~~~~~~-------~~~--~i~~~~~sp~~~~l~~~~  413 (490)
                                -.|+++++..++.  ..+..+.       +..  .-....|+||++.++-.+
T Consensus       310 ~~~~~~~~~~p~i~~~~~~~~~~--~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~S  369 (386)
T PF14583_consen  310 DAGGYKIENDPWIYLFDVEAGRF--RKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRS  369 (386)
T ss_dssp             -----------EEEEEETTTTEE--EEEEE-------BTTBSSTT----EE-TTSSEEEEEE
T ss_pred             ccccceecCCcEEEEeccccCce--eeeeeccCcceeecCCCccCCCCCccCCCCCEEEEEC
Confidence                      1455677765542  2222221       111  136689999998876553

>PRK10115 protease 2; Provisional

Probab=96.83  E-value=0.8  Score=47.73  Aligned_cols=200  Identities=8%  Similarity=-0.018  Sum_probs=105.0

Q ss_pred             CeeEEEECCCCCCEEEEE-eCC----CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC----
Q psy17682        167 PVLDIAWSPHDDNVIASG-SED----CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD----  237 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~-~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d----  237 (490)
                      .+..+.++|+| ++|+-+ ..+    ..|++-|+.++..+...      +. .. . ..++|.++++.++++...+    
T Consensus       128 ~l~~~~~Spdg-~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~------i~-~~-~-~~~~w~~D~~~~~y~~~~~~~~~  197 (686)
T PRK10115        128 TLGGMAITPDN-TIMALAEDFLSRRQYGIRFRNLETGNWYPEL------LD-NV-E-PSFVWANDSWTFYYVRKHPVTLL  197 (686)
T ss_pred             EEeEEEECCCC-CEEEEEecCCCcEEEEEEEEECCCCCCCCcc------cc-Cc-c-eEEEEeeCCCEEEEEEecCCCCC
Confidence            46678899998 555543 333    35888899877533211      11 11 1 4699999987555554432    


Q ss_pred             -CcEEEEECCCC--eeEEEEecCCCcEE-EEEEcCCCCEEEEEeC---CCeEEEEeCC--CCceeeeeeecCCCceeEEE
Q psy17682        238 -NNVAIWNVGTG--EIMIQIECHPDIVY-SASWNWDGSKLLTTCK---DKKMRIINPR--TGAIEEEAVCHEGSKATRAI  308 (490)
Q Consensus       238 -g~v~iwd~~~~--~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~---dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~  308 (490)
                       ..|..+++.++  +....+........ .+..+.++++++..+.   ++.+.+++..  .+.....+. +.......+.
T Consensus       198 ~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~  276 (686)
T PRK10115        198 PYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLP-RRKDHEYSLD  276 (686)
T ss_pred             CCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEE-CCCCCEEEEE
Confidence             36788888877  33334443333333 3333447776665543   3568888853  333222222 2222233332


Q ss_pred             EeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        309 YLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       309 ~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                       +..+.+++....+.....|...++........+........+..+.+.  +++|+++...+|.-+++-+..
T Consensus       277 -~~~~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~--~~~l~~~~~~~g~~~l~~~~~  345 (686)
T PRK10115        277 -HYQHRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLF--TDWLVVEERQRGLTSLRQINR  345 (686)
T ss_pred             -eCCCEEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEE--CCEEEEEEEeCCEEEEEEEcC
Confidence             333444443332223344555555532222222221122356777776  557777887888776666553

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=96.75  E-value=0.75  Score=46.26  Aligned_cols=106  Identities=12%  Similarity=0.161  Sum_probs=65.2

Q ss_pred             CCcEEEEECCCCCcccccccceee-------------------ec----cc-ccCE-EEEEEeeCCCCEEEEEeC-----
Q psy17682        187 DCVVKVWQIPDGGISRTLTEPVVD-------------------LL----YH-QRRV-GLVLWHPTAQNVLLTAGS-----  236 (490)
Q Consensus       187 dg~i~iwd~~~~~~~~~~~~~~~~-------------------~~----~~-~~~v-~~~~~~p~~~~~l~s~~~-----  236 (490)
                      +|.|..+|.++|+.+..+......                   ..    .+ ...+ ..+++.|... +++.+..     
T Consensus       180 ~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~-lvy~~tGnp~p~  258 (527)
T TIGR03075       180 RGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETN-LIYFGTGNPSPW  258 (527)
T ss_pred             CcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCC-eEEEeCCCCCCC
Confidence            688999999999877654321000                   00    01 1122 2346666653 5555441     


Q ss_pred             CC-----------cEEEEECCCCeeEEEEecCCCcEE---------EEEEcCCCC---EEEEEeCCCeEEEEeCCCCcee
Q psy17682        237 DN-----------NVAIWNVGTGEIMIQIECHPDIVY---------SASWNWDGS---KLLTTCKDKKMRIINPRTGAIE  293 (490)
Q Consensus       237 dg-----------~v~iwd~~~~~~~~~~~~~~~~v~---------~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~  293 (490)
                      ++           .|.-.|+++|+....++...+.+.         -+....+|+   .++.+..+|.+++.|-++++.+
T Consensus       259 ~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i  338 (527)
T TIGR03075       259 NSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL  338 (527)
T ss_pred             CCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence            12           566778999999888874222222         222334665   7788999999999999999875

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG2079|consensus

Probab=96.74  E-value=0.0062  Score=62.62  Aligned_cols=106  Identities=17%  Similarity=0.185  Sum_probs=74.0

Q ss_pred             CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee
Q psy17682        312 SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF  391 (490)
Q Consensus       312 ~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~  391 (490)
                      .+..++.|+   ..|.+-..|....-++ .........+|++++|+.+|+.+ +.|-.+|.|.+||+..++ ..+.+...
T Consensus        98 ~~~~ivi~T---s~ghvl~~d~~~nL~~-~~~ne~v~~~Vtsvafn~dg~~l-~~G~~~G~V~v~D~~~~k-~l~~i~e~  171 (1206)
T KOG2079|consen   98 VVVPIVIGT---SHGHVLLSDMTGNLGP-LHQNERVQGPVTSVAFNQDGSLL-LAGLGDGHVTVWDMHRAK-ILKVITEH  171 (1206)
T ss_pred             eeeeEEEEc---Cchhhhhhhhhcccch-hhcCCccCCcceeeEecCCCcee-ccccCCCcEEEEEccCCc-ceeeeeec
Confidence            355677777   4677777777754322 23333456789999999999998 789999999999999987 34455444


Q ss_pred             eCC-CceeeEEEeeCceeEEeecceeEEEEecC
Q psy17682        392 QTP-DPQRGIGMMPKRGCDVNSCEIGRFFRLNN  423 (490)
Q Consensus       392 ~~~-~~i~~~~~sp~~~~l~~~~~~~~~~~~~~  423 (490)
                      .++ ..+-.+.+..++..+.+++..+.+|++.-
T Consensus       172 ~ap~t~vi~v~~t~~nS~llt~D~~Gsf~~lv~  204 (1206)
T KOG2079|consen  172 GAPVTGVIFVGRTSQNSKLLTSDTGGSFWKLVF  204 (1206)
T ss_pred             CCccceEEEEEEeCCCcEEEEccCCCceEEEEe
Confidence            432 33444555567777888887777888753

>PHA02713 hypothetical protein; Provisional

Probab=96.73  E-value=0.073  Score=53.89  Aligned_cols=190  Identities=9%  Similarity=0.058  Sum_probs=93.2

Q ss_pred             CEEEEEeCC------CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC-----cEEEEECCC
Q psy17682        179 NVIASGSED------CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN-----NVAIWNVGT  247 (490)
Q Consensus       179 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-----~v~iwd~~~  247 (490)
                      .+++.||.+      ..+..||..++.-.. +..    +....... +++ .-++ .+.+.||.++     .+..||..+
T Consensus       305 ~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~-~~~----m~~~R~~~-~~~-~~~g-~IYviGG~~~~~~~~sve~Ydp~~  376 (557)
T PHA02713        305 EIIIAGGYNFNNPSLNKVYKINIENKIHVE-LPP----MIKNRCRF-SLA-VIDD-TIYAIGGQNGTNVERTIECYTMGD  376 (557)
T ss_pred             EEEEEcCCCCCCCccceEEEEECCCCeEee-CCC----Ccchhhce-eEE-EECC-EEEEECCcCCCCCCceEEEEECCC
Confidence            677777753      347778876654211 111    11011111 222 2244 4778888764     478899876


Q ss_pred             CeeEE--EEecCCCcEEEEEEcCCCCEEEEEeCC-----------------------CeEEEEeCCCCceeeeeeecCCC
Q psy17682        248 GEIMI--QIECHPDIVYSASWNWDGSKLLTTCKD-----------------------KKMRIINPRTGAIEEEAVCHEGS  302 (490)
Q Consensus       248 ~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------------------g~i~iwd~~~~~~~~~~~~~~~~  302 (490)
                      .+-..  .+.........++.  +++..+.|+.+                       ..+..||..+.+-...-.-... 
T Consensus       377 ~~W~~~~~mp~~r~~~~~~~~--~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~-  453 (557)
T PHA02713        377 DKWKMLPDMPIALSSYGMCVL--DQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTG-  453 (557)
T ss_pred             CeEEECCCCCcccccccEEEE--CCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCCcc-
Confidence            54221  11111111112222  57777777754                       2477888876643211111111 


Q ss_pred             ceeEEEEeCCCcEEEEEeCCCc---eeEEEEecCCC-CCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC--eEEEE
Q psy17682        303 KATRAIYLKSGLIFTTGFSKMS---ERQYSLRAPDH-LDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS--VIRYF  376 (490)
Q Consensus       303 ~~~~~~~s~~~~~l~~~~~~~~---~~~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg--~i~iw  376 (490)
                      .....+..-+|++.+.|+.++.   ...+..||..+ .+- ..............++..  +..|+++|+.|+  .+..|
T Consensus       454 r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W-~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~y  530 (557)
T PHA02713        454 TIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGW-ELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTF  530 (557)
T ss_pred             cccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCe-eEccccCcccccceeEEE--CCEEEEEeeecceeehhhc
Confidence            1122223345777777763211   13567899886 331 111111211111222211  446668998888  77788


Q ss_pred             EecCCC
Q psy17682        377 EITAEP  382 (490)
Q Consensus       377 d~~~~~  382 (490)
                      |..+.+
T Consensus       531 d~~~~~  536 (557)
T PHA02713        531 NVYTYE  536 (557)
T ss_pred             Cccccc
Confidence            887765

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=96.69  E-value=0.56  Score=47.17  Aligned_cols=203  Identities=10%  Similarity=0.009  Sum_probs=116.7

Q ss_pred             CEEEEEeCCCcEEEEECCCCCccccccccee-eecc---cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVV-DLLY---HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI  254 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~---~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~  254 (490)
                      ..++.++.++.|.-.|..+|+.+..+..... ....   ....-..++..  +. .++.++.|+.|.-.|.++|+.+...
T Consensus        70 g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~--~~-~v~v~t~dg~l~ALDa~TGk~~W~~  146 (527)
T TIGR03075        70 GVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALY--DG-KVFFGTLDARLVALDAKTGKVVWSK  146 (527)
T ss_pred             CEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEE--CC-EEEEEcCCCEEEEEECCCCCEEeec
Confidence            4677777788999999999987766542110 0000   00000112222  22 5677888999999999999998876


Q ss_pred             ecCCCc-EEEEEEcC--CCCEEEEEeC------CCeEEEEeCCCCceeeeeeecCC------------------------
Q psy17682        255 ECHPDI-VYSASWNW--DGSKLLTTCK------DKKMRIINPRTGAIEEEAVCHEG------------------------  301 (490)
Q Consensus       255 ~~~~~~-v~~~~~~~--~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~------------------------  301 (490)
                      ...... -..+.-+|  .+..++++..      +|.|+.+|.++++.+..+..-..                        
T Consensus       147 ~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~  226 (527)
T TIGR03075       147 KNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPGD  226 (527)
T ss_pred             ccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCCC
Confidence            521110 01111122  1234555432      68999999999988766542110                        


Q ss_pred             -------CceeEEEEeCCCcEEEEEeCC-----C--------ceeEEEEecCCCCCCCeEEEeccCCCc-------eeee
Q psy17682        302 -------SKATRAIYLKSGLIFTTGFSK-----M--------SERQYSLRAPDHLDEPIVMVELDTSNG-------VMFP  354 (490)
Q Consensus       302 -------~~~~~~~~s~~~~~l~~~~~~-----~--------~~~~i~iwd~~~~~~~~~~~~~~~~~~-------i~~~  354 (490)
                             ..-..+.+.++..++..+...     +        ....|.-.|+++++..-.++..+|...       ..-+
T Consensus       227 ~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~  306 (527)
T TIGR03075       227 AWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMILF  306 (527)
T ss_pred             ccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEEE
Confidence                   112234666665555554421     0        012566677888776555555444221       1222


Q ss_pred             eecCCCC--eEEEEecCCCeEEEEEecCCCCe
Q psy17682        355 LYDPDTN--LVYLCGKGDSVIRYFEITAEPPF  384 (490)
Q Consensus       355 ~~s~~~~--~l~~~g~~dg~i~iwd~~~~~~~  384 (490)
                      ....+|+  .+++.+..+|.+++.|-.+++++
T Consensus       307 d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i  338 (527)
T TIGR03075       307 DLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL  338 (527)
T ss_pred             EeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence            2334666  45578999999999999999853

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.68  E-value=0.29  Score=43.21  Aligned_cols=131  Identities=13%  Similarity=0.088  Sum_probs=83.2

Q ss_pred             EEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCc-EEEEECCCCe
Q psy17682        171 IAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNN-VAIWNVGTGE  249 (490)
Q Consensus       171 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~-v~iwd~~~~~  249 (490)
                      ....++|...+++.+++|++.- .+         .        -..+...++|+|.-+.-++.+-.-|+ ..++|....+
T Consensus        41 af~~~dgs~g~a~~~eaGk~v~-~~---------~--------lpaR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~  102 (366)
T COG3490          41 AFDARDGSFGAATLSEAGKIVF-AT---------A--------LPARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQ  102 (366)
T ss_pred             eeeccCCceeEEEEccCCceee-ee---------e--------cccccCCeecCCCCcceEEEEecCCceEEEECCCCCc
Confidence            3345566556677777776532 11         1        12334467788876655555555554 4678888777


Q ss_pred             eEEEEecCCCc--EEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCC-ceeeeeeecCCCceeEEEEeCCCcEEEEEe
Q psy17682        250 IMIQIECHPDI--VYSASWNWDGSKLLTTCKD-----KKMRIINPRTG-AIEEEAVCHEGSKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       250 ~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~  320 (490)
                      ....+...++.  --.-.|||||.+|...-.|     |.|-|||.+.+ +.+.++..|.-. ...+.+.+||+.++...
T Consensus       103 ~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiG-pHev~lm~DGrtlvvan  180 (366)
T COG3490         103 EPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIG-PHEVTLMADGRTLVVAN  180 (366)
T ss_pred             CcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcC-cceeEEecCCcEEEEeC
Confidence            66555422211  1234699999998876543     67999999854 345556655544 78899999999998873

>PRK10115 protease 2; Provisional

Probab=96.63  E-value=1.1  Score=46.67  Aligned_cols=116  Identities=13%  Similarity=0.010  Sum_probs=69.7

Q ss_pred             CEEEEEEeeCCCCEEEEEeCCC----cEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC------CeEEEEe
Q psy17682        217 RVGLVLWHPTAQNVLLTAGSDN----NVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD------KKMRIIN  286 (490)
Q Consensus       217 ~v~~~~~~p~~~~~l~s~~~dg----~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd  286 (490)
                      .+..+.|+|+++.+.++...+|    .|++.|+.+++.+...-...  -..++|.+|++.|+....+      ..|+.++
T Consensus       128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~--~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~  205 (686)
T PRK10115        128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV--EPSFVWANDSWTFYYVRKHPVTLLPYQVWRHT  205 (686)
T ss_pred             EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc--ceEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence            4677889999974444433333    58888998886432221111  1469999999866665432      3688889


Q ss_pred             CCCCc--eeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCC
Q psy17682        287 PRTGA--IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPD  334 (490)
Q Consensus       287 ~~~~~--~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~  334 (490)
                      +.++.  -...+.............+.++++++..+....++.+.+++..
T Consensus       206 lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~  255 (686)
T PRK10115        206 IGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAE  255 (686)
T ss_pred             CCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECc
Confidence            88873  2223332222212233344477776666655567788888854

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=96.59  E-value=0.52  Score=42.37  Aligned_cols=157  Identities=13%  Similarity=0.075  Sum_probs=92.8

Q ss_pred             CEEEEEEeeCCCCEEEEEe-CCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCceee
Q psy17682        217 RVGLVLWHPTAQNVLLTAG-SDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIIN-PRTGAIEE  294 (490)
Q Consensus       217 ~v~~~~~~p~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd-~~~~~~~~  294 (490)
                      .+.+.++++++. .++... .++.-.+|-...+....... ....+....|++++...+....+...+++. ...+....
T Consensus        25 ~~~s~AvS~dg~-~~A~v~~~~~~~~L~~~~~~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~  102 (253)
T PF10647_consen   25 DVTSPAVSPDGS-RVAAVSEGDGGRSLYVGPAGGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEP  102 (253)
T ss_pred             cccceEECCCCC-eEEEEEEcCCCCEEEEEcCCCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCccee
Confidence            688999999997 444433 23333333333333333332 233688889999988777767666666663 33333221


Q ss_pred             -eeeecCCC-ceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC--CeEE---Eec--cCCCceeeeeecCCCCeEEE
Q psy17682        295 -EAVCHEGS-KATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE--PIVM---VEL--DTSNGVMFPLYDPDTNLVYL  365 (490)
Q Consensus       295 -~~~~~~~~-~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~--~~~~---~~~--~~~~~i~~~~~s~~~~~l~~  365 (490)
                       ........ .|..+.+||||..++.-..++.++.|.+--+.....  +..+   ...  .....+..+.|.+++.++++
T Consensus       103 ~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~  182 (253)
T PF10647_consen  103 VEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVL  182 (253)
T ss_pred             EEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEE
Confidence             22211111 599999999999887766444466777654432211  1111   111  22356889999999998876


Q ss_pred             EecCCCeEEE
Q psy17682        366 CGKGDSVIRY  375 (490)
Q Consensus       366 ~g~~dg~i~i  375 (490)
                      +...++.+..
T Consensus       183 ~~~~~~~~~~  192 (253)
T PF10647_consen  183 GRSAGGPVVR  192 (253)
T ss_pred             eCCCCCceeE
Confidence            6666665554

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.35  E-value=0.016  Score=36.22  Aligned_cols=34  Identities=15%  Similarity=0.100  Sum_probs=29.8

Q ss_pred             CCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy17682        257 HPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGA  291 (490)
Q Consensus       257 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  291 (490)
                      ....|..++|+|...+||.++.+|.|.+|.+ +++
T Consensus        10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~q   43 (47)
T PF12894_consen   10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQ   43 (47)
T ss_pred             CCCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCc
Confidence            3456999999999999999999999999998 444

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.27  E-value=0.02  Score=35.77  Aligned_cols=33  Identities=30%  Similarity=0.509  Sum_probs=29.0

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG  199 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~  199 (490)
                      ...|.+++|+|.. .++|.+..+|.|.+|.+ +++
T Consensus        11 ~~~v~~~~w~P~m-dLiA~~t~~g~v~v~Rl-~~q   43 (47)
T PF12894_consen   11 PSRVSCMSWCPTM-DLIALGTEDGEVLVYRL-NWQ   43 (47)
T ss_pred             CCcEEEEEECCCC-CEEEEEECCCeEEEEEC-CCc
Confidence            4569999999988 89999999999999998 444

>KOG2444|consensus

Probab=96.21  E-value=0.03  Score=47.58  Aligned_cols=105  Identities=11%  Similarity=0.074  Sum_probs=65.7

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCC
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHP  258 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~  258 (490)
                      .-++.|+.+|.|.+|+...........      ..-...|.++.-.-+...+..+++.||.|+.|++.-.+.+.....|.
T Consensus        71 ~~~~vG~~dg~v~~~n~n~~g~~~d~~------~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~  144 (238)
T KOG2444|consen   71 AKLMVGTSDGAVYVFNWNLEGAHSDRV------CSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHN  144 (238)
T ss_pred             ceEEeecccceEEEecCCccchHHHhh------hcccccceeccccccccceeEEeccCCceeeeccccCceeeeecccc
Confidence            678999999999999976222211111      01223333333232323488999999999999998888777666666


Q ss_pred             -CcEEEEEEcCCCCEEEEE--eCCCeEEEEeCCC
Q psy17682        259 -DIVYSASWNWDGSKLLTT--CKDKKMRIINPRT  289 (490)
Q Consensus       259 -~~v~~~~~~~~~~~l~~~--~~dg~i~iwd~~~  289 (490)
                       .++..+..+..+++++.+  |.|..++.|++..
T Consensus       145 ~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~  178 (238)
T KOG2444|consen  145 FESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK  178 (238)
T ss_pred             CCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence             444455555555556655  6666666666653

>KOG2444|consensus

Probab=96.06  E-value=0.016  Score=49.10  Aligned_cols=143  Identities=13%  Similarity=0.074  Sum_probs=79.7

Q ss_pred             EEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEE-EecCCC
Q psy17682        181 IASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQ-IECHPD  259 (490)
Q Consensus       181 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~~~~  259 (490)
                      +..-+.||.|+-++++..+.....      ...|...-.-+.+    ..-++.|+.+|.|.+|.......... +.....
T Consensus        33 l~~~sa~~~v~~~~~~k~k~s~rs------e~~~~e~~~v~~~----~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e  102 (238)
T KOG2444|consen   33 LRATSADGLVRERKVRKHKESCRS------ERFIDEGQRVVTA----SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEE  102 (238)
T ss_pred             hccccCCcccccchhhhhhhhhhh------hhhhhcceeeccc----CceEEeecccceEEEecCCccchHHHhhhcccc
Confidence            333456778877776543321110      1112222122222    23688999999999998862221111 111222


Q ss_pred             cEEEE-EEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEE--eCCCceeEEEEecCCCC
Q psy17682        260 IVYSA-SWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG--FSKMSERQYSLRAPDHL  336 (490)
Q Consensus       260 ~v~~~-~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~--~~~~~~~~i~iwd~~~~  336 (490)
                      .|.++ .--.++.+..+++.||.|+.|++.-.+.+.....|..........+..++.++.+  +   .+..++.|++...
T Consensus       103 ~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S---~d~~~k~W~ve~~  179 (238)
T KOG2444|consen  103 SIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTS---HDRVLKKWNVEKI  179 (238)
T ss_pred             cceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccc---cchhhhhcchhhh
Confidence            23222 2223456888999999999999988777766666663334445555555555544  3   4666677776643

>PHA03098 kelch-like protein; Provisional

Probab=96.04  E-value=0.56  Score=47.59  Aligned_cols=189  Identities=11%  Similarity=0.129  Sum_probs=88.1

Q ss_pred             CEEEEEeCCC------cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC-----CcEEEEECCC
Q psy17682        179 NVIASGSEDC------VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-----NNVAIWNVGT  247 (490)
Q Consensus       179 ~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~v~iwd~~~  247 (490)
                      .+++.||.++      .+..||..+++-.. +..    +.........+.  -++ .+++.||.+     ..+..||..+
T Consensus       296 ~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~-~~~----~~~~R~~~~~~~--~~~-~lyv~GG~~~~~~~~~v~~yd~~~  367 (534)
T PHA03098        296 VIYFIGGMNKNNLSVNSVVSYDTKTKSWNK-VPE----LIYPRKNPGVTV--FNN-RIYVIGGIYNSISLNTVESWKPGE  367 (534)
T ss_pred             EEEEECCCcCCCCeeccEEEEeCCCCeeeE-CCC----CCcccccceEEE--ECC-EEEEEeCCCCCEecceEEEEcCCC
Confidence            5667776543      56778877655422 111    110111112222  244 477888865     3477788876


Q ss_pred             CeeEEE--EecCCCcEEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682        248 GEIMIQ--IECHPDIVYSASWNWDGSKLLTTCKD------KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG  319 (490)
Q Consensus       248 ~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~  319 (490)
                      .+-...  +...... .+++. -+++.++.|+.+      +.+..||..+.+-...-..... .....+...++.+++.|
T Consensus       368 ~~W~~~~~lp~~r~~-~~~~~-~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~-r~~~~~~~~~~~iyv~G  444 (534)
T PHA03098        368 SKWREEPPLIFPRYN-PCVVN-VNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPIS-HYGGCAIYHDGKIYVIG  444 (534)
T ss_pred             CceeeCCCcCcCCcc-ceEEE-ECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCcc-ccCceEEEECCEEEEEC
Confidence            542211  1111111 12222 256777777632      4588999886543221111111 11112233466777777


Q ss_pred             eCCCc-----eeEEEEecCCCCCCCeEEEeccCC-CceeeeeecCCCCeEEEEecCC-----CeEEEEEecCCC
Q psy17682        320 FSKMS-----ERQYSLRAPDHLDEPIVMVELDTS-NGVMFPLYDPDTNLVYLCGKGD-----SVIRYFEITAEP  382 (490)
Q Consensus       320 ~~~~~-----~~~i~iwd~~~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~~~g~~d-----g~i~iwd~~~~~  382 (490)
                      +....     -..+.+||..+.+-.. ....... .....+.+  +++ |++.|+.+     ..+.+||..+.+
T Consensus       445 G~~~~~~~~~~~~v~~yd~~~~~W~~-~~~~~~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~~  514 (534)
T PHA03098        445 GISYIDNIKVYNIVESYNPVTNKWTE-LSSLNFPRINASLCIF--NNK-IYVVGGDKYEYYINEIEVYDDKTNT  514 (534)
T ss_pred             CccCCCCCcccceEEEecCCCCceee-CCCCCcccccceEEEE--CCE-EEEEcCCcCCcccceeEEEeCCCCE
Confidence            53211     1348888887643211 1111111 11112222  444 44666654     467778877653

>PHA02713 hypothetical protein; Provisional

Probab=95.95  E-value=1.5  Score=44.64  Aligned_cols=187  Identities=8%  Similarity=-0.017  Sum_probs=87.3

Q ss_pred             CEEEEEeCC------CcEEEEECCCCeeEEEEec---CCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCceee
Q psy17682        229 NVLLTAGSD------NNVAIWNVGTGEIMIQIEC---HPDIVYSASWNWDGSKLLTTCKDK-----KMRIINPRTGAIEE  294 (490)
Q Consensus       229 ~~l~s~~~d------g~v~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~  294 (490)
                      .+++.||.+      ..+..||.++.+-. .+..   .........  -+|+..+.|+.++     ++..||..+.+-..
T Consensus       305 ~IYviGG~~~~~~~~~~v~~Yd~~~n~W~-~~~~m~~~R~~~~~~~--~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~  381 (557)
T PHA02713        305 EIIIAGGYNFNNPSLNKVYKINIENKIHV-ELPPMIKNRCRFSLAV--IDDTIYAIGGQNGTNVERTIECYTMGDDKWKM  381 (557)
T ss_pred             EEEEEcCCCCCCCccceEEEEECCCCeEe-eCCCCcchhhceeEEE--ECCEEEEECCcCCCCCCceEEEEECCCCeEEE
Confidence            477888754      34778888776422 2221   111122222  2577888888654     48889988764322


Q ss_pred             eeeecCCCceeEEEEeCCCcEEEEEeCCCc--------------------eeEEEEecCCCCCCCeEEEeccCCCceeee
Q psy17682        295 EAVCHEGSKATRAIYLKSGLIFTTGFSKMS--------------------ERQYSLRAPDHLDEPIVMVELDTSNGVMFP  354 (490)
Q Consensus       295 ~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~--------------------~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~  354 (490)
                      .-.-.. ......+..-+|++.+.|+.++.                    ...+..||..+..-. ..........-.++
T Consensus       382 ~~~mp~-~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~-~v~~m~~~r~~~~~  459 (557)
T PHA02713        382 LPDMPI-ALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWE-TLPNFWTGTIRPGV  459 (557)
T ss_pred             CCCCCc-ccccccEEEECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEe-ecCCCCcccccCcE
Confidence            111111 11111122336888888764321                    235777887764311 11111111111111


Q ss_pred             eecCCCCeEEEEecCC------CeEEEEEecC-CCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc----eeEEEEecC
Q psy17682        355 LYDPDTNLVYLCGKGD------SVIRYFEITA-EPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE----IGRFFRLNN  423 (490)
Q Consensus       355 ~~s~~~~~l~~~g~~d------g~i~iwd~~~-~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~----~~~~~~~~~  423 (490)
                      + .-+| .|++.|+.+      ..+..||..+ .+  ...+..........+++.. ++.+.+.|+-    .+..|+..+
T Consensus       460 ~-~~~~-~IYv~GG~~~~~~~~~~ve~Ydp~~~~~--W~~~~~m~~~r~~~~~~~~-~~~iyv~Gg~~~~~~~e~yd~~~  534 (557)
T PHA02713        460 V-SHKD-DIYVVCDIKDEKNVKTCIFRYNTNTYNG--WELITTTESRLSALHTILH-DNTIMMLHCYESYMLQDTFNVYT  534 (557)
T ss_pred             E-EECC-EEEEEeCCCCCCccceeEEEecCCCCCC--eeEccccCcccccceeEEE-CCEEEEEeeecceeehhhcCccc
Confidence            1 2234 455777654      2467888887 44  2233333322223333333 4444444431    234455555


Q ss_pred             CC
Q psy17682        424 SG  425 (490)
Q Consensus       424 ~~  425 (490)
                      ++
T Consensus       535 ~~  536 (557)
T PHA02713        535 YE  536 (557)
T ss_pred             cc
Confidence            44

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=95.90  E-value=0.5  Score=47.62  Aligned_cols=110  Identities=15%  Similarity=0.225  Sum_probs=73.1

Q ss_pred             EEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-cCCCcEEEEEEc--CCCCEEEEEeCCCeEEEEeCC-------
Q psy17682        219 GLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWN--WDGSKLLTTCKDKKMRIINPR-------  288 (490)
Q Consensus       219 ~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~~-------  288 (490)
                      .-+.-+.-++ ..++-+....+.|||.+.+....+-. ...+.|.++.|.  |+++.+++.+..+.|.+|--.       
T Consensus        33 ~li~gss~~k-~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~  111 (631)
T PF12234_consen   33 SLISGSSIKK-IAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNK  111 (631)
T ss_pred             ceEeecccCc-EEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcC
Confidence            3344444443 33333344679999998876433322 347789999986  488999999999999998542       


Q ss_pred             --CCceeeeee--ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCC
Q psy17682        289 --TGAIEEEAV--CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPD  334 (490)
Q Consensus       289 --~~~~~~~~~--~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~  334 (490)
                        +..+++.+.  .+...+|....|.++|.+++++     ++.+.|+|-.
T Consensus       112 ~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s-----GNqlfv~dk~  156 (631)
T PF12234_consen  112 GPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS-----GNQLFVFDKW  156 (631)
T ss_pred             CcccceeEEEEeecCCCCCccceeEecCCeEEEEe-----CCEEEEECCC
Confidence              112333332  4554568999999999887755     4678888754

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=95.90  E-value=0.69  Score=44.27  Aligned_cols=146  Identities=11%  Similarity=0.072  Sum_probs=80.4

Q ss_pred             CcEEEEEEcCCCCEEEEEe-----------CCC-eEEEEeCCC--Cce--eeeeeecCCCceeEEEEeCCCcEEEEEeCC
Q psy17682        259 DIVYSASWNWDGSKLLTTC-----------KDK-KMRIINPRT--GAI--EEEAVCHEGSKATRAIYLKSGLIFTTGFSK  322 (490)
Q Consensus       259 ~~v~~~~~~~~~~~l~~~~-----------~dg-~i~iwd~~~--~~~--~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~  322 (490)
                      .....|+|.++|+++++-.           ..+ .|.+++-..  ++.  ...+... -.....+++.++| ++++.   
T Consensus        14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~-l~~p~Gi~~~~~G-lyV~~---   88 (367)
T TIGR02604        14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEE-LSMVTGLAVAVGG-VYVAT---   88 (367)
T ss_pred             CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecC-CCCccceeEecCC-EEEeC---
Confidence            3456889999998777653           223 677776543  322  2223222 2236889999999 55543   


Q ss_pred             CceeEEEEecCCCCC----CC-eEEEeccC-----CCceeeeeecCCCCeEEEEecCC------------------CeEE
Q psy17682        323 MSERQYSLRAPDHLD----EP-IVMVELDT-----SNGVMFPLYDPDTNLVYLCGKGD------------------SVIR  374 (490)
Q Consensus       323 ~~~~~i~iwd~~~~~----~~-~~~~~~~~-----~~~i~~~~~s~~~~~l~~~g~~d------------------g~i~  374 (490)
                       ....+++.|.....    .. .....+..     ......+.|.|||.+.+..|+..                  |.|.
T Consensus        89 -~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~  167 (367)
T TIGR02604        89 -PPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLF  167 (367)
T ss_pred             -CCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEE
Confidence             24444454554321    11 12222222     24477899999998764444211                  3344


Q ss_pred             EEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc
Q psy17682        375 YFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       375 iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  414 (490)
                      -++...++  .+.+.  .......+++|+|+|.+.++..+
T Consensus       168 r~~pdg~~--~e~~a--~G~rnp~Gl~~d~~G~l~~tdn~  203 (367)
T TIGR02604       168 RYNPDGGK--LRVVA--HGFQNPYGHSVDSWGDVFFCDND  203 (367)
T ss_pred             EEecCCCe--EEEEe--cCcCCCccceECCCCCEEEEccC
Confidence            44444432  22221  12245679999999988776654

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=95.64  E-value=1.8  Score=39.82  Aligned_cols=154  Identities=10%  Similarity=0.092  Sum_probs=76.6

Q ss_pred             cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCce
Q psy17682        214 HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPR-TGAI  292 (490)
Q Consensus       214 ~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~  292 (490)
                      -.+.+..+.-+++|. +++++.......-||--...-...-......|..|.|.|++.+.+++ ..|.|+.=+.. ..+.
T Consensus       143 ~~gs~~~~~r~~dG~-~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~  220 (302)
T PF14870_consen  143 TSGSINDITRSSDGR-YVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGET  220 (302)
T ss_dssp             ----EEEEEE-TTS--EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEE
T ss_pred             CcceeEeEEECCCCc-EEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccc
Confidence            446788888899985 77676555555677754322222222346789999999998766654 88888887722 1111


Q ss_pred             eee--eee-cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec-cCCCceeeeeecCCCCeEEEEec
Q psy17682        293 EEE--AVC-HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-DTSNGVMFPLYDPDTNLVYLCGK  368 (490)
Q Consensus       293 ~~~--~~~-~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~g~  368 (490)
                      -..  ... ..+.-+..++|.+++.+.++|.    .+.+.. ..+.++.-...... ........+.|.++.+-+ +.| 
T Consensus       221 w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg----~G~l~~-S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf-~lG-  293 (302)
T PF14870_consen  221 WSEPIIPIKTNGYGILDLAYRPPNEIWAVGG----SGTLLV-STDGGKTWQKDRVGENVPSNLYRIVFVNPDKGF-VLG-  293 (302)
T ss_dssp             E---B-TTSS--S-EEEEEESSSS-EEEEES----TT-EEE-ESSTTSS-EE-GGGTTSSS---EEEEEETTEEE-EE--
T ss_pred             cccccCCcccCceeeEEEEecCCCCEEEEeC----CccEEE-eCCCCccceECccccCCCCceEEEEEcCCCceE-EEC-
Confidence            111  111 1222378899999999998886    444432 33433322222111 223457788887665544 555 


Q ss_pred             CCCeEEEE
Q psy17682        369 GDSVIRYF  376 (490)
Q Consensus       369 ~dg~i~iw  376 (490)
                      .+|.+--|
T Consensus       294 ~~G~ll~~  301 (302)
T PF14870_consen  294 QDGVLLRY  301 (302)
T ss_dssp             STTEEEEE
T ss_pred             CCcEEEEe
Confidence            68876554

>KOG4441|consensus

Probab=95.43  E-value=0.86  Score=46.24  Aligned_cols=190  Identities=12%  Similarity=0.095  Sum_probs=98.8

Q ss_pred             CEEEEEeCCC------cEEEEECCCCeeEEEEec-CCCcEEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCceeee
Q psy17682        229 NVLLTAGSDN------NVAIWNVGTGEIMIQIEC-HPDIVYSASWNWDGSKLLTTCKD------KKMRIINPRTGAIEEE  295 (490)
Q Consensus       229 ~~l~s~~~dg------~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~  295 (490)
                      .+++.||.++      .+..||..+++....-.. ....-.+++.. ++...++|+.|      .++..||.++.+-.. 
T Consensus       286 ~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~-  363 (571)
T KOG4441|consen  286 KLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTP-  363 (571)
T ss_pred             eEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCceec-
Confidence            4778888773      678889887743332221 22223344443 46788889888      358889988776332 


Q ss_pred             eeecCCCceeEEEEeCCCcEEEEEeCCCc--eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC--
Q psy17682        296 AVCHEGSKATRAIYLKSGLIFTTGFSKMS--ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS--  371 (490)
Q Consensus       296 ~~~~~~~~~~~~~~s~~~~~l~~~~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg--  371 (490)
                      ...-...+...-.-.-+|.+.++|+.++.  -..+-.||..+.+-...-   .............-+..|+++|+.++  
T Consensus       364 ~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va---~m~~~r~~~gv~~~~g~iYi~GG~~~~~  440 (571)
T KOG4441|consen  364 VAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVA---PMLTRRSGHGVAVLGGKLYIIGGGDGSS  440 (571)
T ss_pred             cCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccC---CCCcceeeeEEEEECCEEEEEcCcCCCc
Confidence            11111111222223346888888875432  234777887765421111   01112222222233456668887554  


Q ss_pred             ----eEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc------eeEEEEecCCC
Q psy17682        372 ----VIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE------IGRFFRLNNSG  425 (490)
Q Consensus       372 ----~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~------~~~~~~~~~~~  425 (490)
                          .+..||..+++  .+.+........-.+++.-.+..+.+.|..      .+..|+..+.+
T Consensus       441 ~~l~sve~YDP~t~~--W~~~~~M~~~R~~~g~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~  502 (571)
T KOG4441|consen  441 NCLNSVECYDPETNT--WTLIAPMNTRRSGFGVAVLNGKIYVVGGFDGTSALSSVERYDPETNQ  502 (571)
T ss_pred             cccceEEEEcCCCCc--eeecCCcccccccceEEEECCEEEEECCccCCCccceEEEEcCCCCc
Confidence                56788887764  223333332222334555555444444422      24556666655

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=95.32  E-value=2.9  Score=40.25  Aligned_cols=96  Identities=17%  Similarity=0.253  Sum_probs=57.1

Q ss_pred             EEEECCCCCCEEEEEeCCCcEEE---EECCC-CCcccccccceeeecccc--cCEEEEEEeeC----------CCCEEEE
Q psy17682        170 DIAWSPHDDNVIASGSEDCVVKV---WQIPD-GGISRTLTEPVVDLLYHQ--RRVGLVLWHPT----------AQNVLLT  233 (490)
Q Consensus       170 ~~~~~p~~~~~l~s~~~dg~i~i---wd~~~-~~~~~~~~~~~~~~~~~~--~~v~~~~~~p~----------~~~~l~s  233 (490)
                      .++.+|++ .+++.+..+..+.+   |+... +.....+.........+.  ..|+++.|-|-          +...++.
T Consensus         6 ~isls~~~-d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~V   84 (415)
T PF14655_consen    6 SISLSPDG-DLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAV   84 (415)
T ss_pred             eEEecCCC-CEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEE
Confidence            45778888 78888877766555   54321 111111111111111122  57888877653          1248999


Q ss_pred             EeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEc
Q psy17682        234 AGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWN  267 (490)
Q Consensus       234 ~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~  267 (490)
                      |..+|.|++|.. +|..+..-.-|..+|..+...
T Consensus        85 G~ssG~vrfyte-~G~LL~~Q~~h~~pV~~ik~~  117 (415)
T PF14655_consen   85 GTSSGYVRFYTE-NGVLLLSQLLHEEPVLKIKCR  117 (415)
T ss_pred             EecccEEEEEec-cchHHHHHhcCccceEEEEec
Confidence            999999999986 666655555577777777664

>KOG4499|consensus

Probab=95.24  E-value=0.99  Score=38.83  Aligned_cols=100  Identities=17%  Similarity=0.241  Sum_probs=68.2

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEE--CCCCCcccccccceeeecc----cccCEEEEEEeeCCCCEEEEEeCCCc
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQ--IPDGGISRTLTEPVVDLLY----HQRRVGLVLWHPTAQNVLLTAGSDNN  239 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd--~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~p~~~~~l~s~~~dg~  239 (490)
                      +--+.++|+.+...+.++-+.+-+|.-||  ..+|.....  ..+..+..    .....-.++..-+| ++.++.-..++
T Consensus       158 ~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr--~~i~dlrk~~~~e~~~PDGm~ID~eG-~L~Va~~ng~~  234 (310)
T KOG4499|consen  158 GISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNR--KVIFDLRKSQPFESLEPDGMTIDTEG-NLYVATFNGGT  234 (310)
T ss_pred             cCCccccccccCcEEEEEccCceEEeeeecCCCcccccCc--ceeEEeccCCCcCCCCCCcceEccCC-cEEEEEecCcE
Confidence            34457889887767777788888898888  556544321  11111111    11112334445566 57888888899


Q ss_pred             EEEEECCCCeeEEEEecCCCcEEEEEEcC
Q psy17682        240 VAIWNVGTGEIMIQIECHPDIVYSASWNW  268 (490)
Q Consensus       240 v~iwd~~~~~~~~~~~~~~~~v~~~~~~~  268 (490)
                      |...|..+|+.+.+++-....|++++|--
T Consensus       235 V~~~dp~tGK~L~eiklPt~qitsccFgG  263 (310)
T KOG4499|consen  235 VQKVDPTTGKILLEIKLPTPQITSCCFGG  263 (310)
T ss_pred             EEEECCCCCcEEEEEEcCCCceEEEEecC
Confidence            99999999999999998889999999964

>KOG3630|consensus

Probab=95.17  E-value=0.33  Score=51.01  Aligned_cols=153  Identities=14%  Similarity=0.053  Sum_probs=94.2

Q ss_pred             cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCccc---CCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGR---INADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC  188 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~---~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg  188 (490)
                      .+..+...+|  ..+..++.+.. +-.|..|++.........   .....++......-+.++.|+|.=....+.+..|+
T Consensus       102 pi~~~v~~~D--~t~s~v~~tsn-g~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dl  178 (1405)
T KOG3630|consen  102 PIVIFVCFHD--ATDSVVVSTSN-GEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDL  178 (1405)
T ss_pred             cceEEEeccC--CceEEEEEecC-CceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhcccc
Confidence            4555556666  34445454444 667888888643222211   11111122223345678899997666778888999


Q ss_pred             cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec----CCCcEEEE
Q psy17682        189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC----HPDIVYSA  264 (490)
Q Consensus       189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~----~~~~v~~~  264 (490)
                      .|++..+........      .+ ......++++|+|.|. .++.|-..|++.-|... .+....+.+    ....|.++
T Consensus       179 sl~V~~~~~~~~~v~------s~-p~t~~~Tav~WSprGK-Ql~iG~nnGt~vQy~P~-leik~~ip~Pp~~e~yrvl~v  249 (1405)
T KOG3630|consen  179 SLRVKSTKQLAQNVT------SF-PVTNSQTAVLWSPRGK-QLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEENYRVLSV  249 (1405)
T ss_pred             chhhhhhhhhhhhhc------cc-CcccceeeEEeccccc-eeeEecCCCeEEEeecc-cceeecccCCCcCCCcceeEE
Confidence            999987643221111      01 1455689999999996 89999999999988753 333333321    24679999


Q ss_pred             EEcCCCCEEEEE
Q psy17682        265 SWNWDGSKLLTT  276 (490)
Q Consensus       265 ~~~~~~~~l~~~  276 (490)
                      +|-....++++-
T Consensus       250 ~Wl~t~eflvvy  261 (1405)
T KOG3630|consen  250 TWLSTQEFLVVY  261 (1405)
T ss_pred             EEecceeEEEEe
Confidence            998766655543

>PHA02790 Kelch-like protein; Provisional

Probab=95.02  E-value=1.7  Score=43.40  Aligned_cols=183  Identities=8%  Similarity=-0.046  Sum_probs=85.0

Q ss_pred             CEEEEEeCCC-----cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC--CcEEEEECCCCeeE
Q psy17682        179 NVIASGSEDC-----VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD--NNVAIWNVGTGEIM  251 (490)
Q Consensus       179 ~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d--g~v~iwd~~~~~~~  251 (490)
                      .+++.||.++     ++..||..++.-... ..    +....... +++ .-++ .+.+.||.+  ..+..||..+++-.
T Consensus       273 ~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~-~~----m~~~r~~~-~~v-~~~~-~iYviGG~~~~~sve~ydp~~n~W~  344 (480)
T PHA02790        273 VVYLIGGWMNNEIHNNAIAVNYISNNWIPI-PP----MNSPRLYA-SGV-PANN-KLYVVGGLPNPTSVERWFHGDAAWV  344 (480)
T ss_pred             EEEEEcCCCCCCcCCeEEEEECCCCEEEEC-CC----CCchhhcc-eEE-EECC-EEEEECCcCCCCceEEEECCCCeEE
Confidence            5667777543     466788766543221 11    11011111 122 2345 477788764  35788887655322


Q ss_pred             E--EEecCCCcEEEEEEcCCCCEEEEEeCCC---eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCcee
Q psy17682        252 I--QIECHPDIVYSASWNWDGSKLLTTCKDK---KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSER  326 (490)
Q Consensus       252 ~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~  326 (490)
                      .  .+.........+.  -+|+..+.|+.++   .+..||.++.+-...-.... ......+..-+|++.+.|+      
T Consensus       345 ~~~~l~~~r~~~~~~~--~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~-~r~~~~~~~~~~~IYv~GG------  415 (480)
T PHA02790        345 NMPSLLKPRCNPAVAS--INNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYY-PHYKSCALVFGRRLFLVGR------  415 (480)
T ss_pred             ECCCCCCCCcccEEEE--ECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCC-ccccceEEEECCEEEEECC------
Confidence            1  1111111111222  2577778877553   47788887654322111111 1111222344677777774      


Q ss_pred             EEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC-----CeEEEEEecCC
Q psy17682        327 QYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD-----SVIRYFEITAE  381 (490)
Q Consensus       327 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d-----g~i~iwd~~~~  381 (490)
                      .+.+||.++.+-. ..........-..++. -+| .|++.|+.+     ..+..||..++
T Consensus       416 ~~e~ydp~~~~W~-~~~~m~~~r~~~~~~v-~~~-~IYviGG~~~~~~~~~ve~Yd~~~~  472 (480)
T PHA02790        416 NAEFYCESSNTWT-LIDDPIYPRDNPELII-VDN-KLLLIGGFYRGSYIDTIEVYNNRTY  472 (480)
T ss_pred             ceEEecCCCCcEe-EcCCCCCCccccEEEE-ECC-EEEEECCcCCCcccceEEEEECCCC
Confidence            3567888754321 1111111111112222 234 455777754     34566666654

>KOG2280|consensus

Probab=95.01  E-value=3.1  Score=42.21  Aligned_cols=209  Identities=10%  Similarity=0.098  Sum_probs=103.7

Q ss_pred             CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE----ecCCCcEE
Q psy17682        187 DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI----ECHPDIVY  262 (490)
Q Consensus       187 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~----~~~~~~v~  262 (490)
                      -..|+|+++ +|+.+..+.       .....+-.+.|+.+.  .|+....+|++++|++. |+.+...    ......|.
T Consensus        63 ~~~I~If~~-sG~lL~~~~-------w~~~~lI~mgWs~~e--eLI~v~k~g~v~Vy~~~-ge~ie~~svg~e~~~~~I~  131 (829)
T KOG2280|consen   63 RPYIRIFNI-SGQLLGRIL-------WKHGELIGMGWSDDE--ELICVQKDGTVHVYGLL-GEFIESNSVGFESQMSDIV  131 (829)
T ss_pred             ceeEEEEec-cccchHHHH-------hcCCCeeeecccCCc--eEEEEeccceEEEeecc-hhhhcccccccccccCcee
Confidence            356888885 555544432       133478899999886  46777799999999985 3333321    22233455


Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeee-cCCC-ceeEEEEeCCCcEEEEEeCCCcee--EEEEecCCCCCC
Q psy17682        263 SASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVC-HEGS-KATRAIYLKSGLIFTTGFSKMSER--QYSLRAPDHLDE  338 (490)
Q Consensus       263 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~-~~~~~~~s~~~~~l~~~~~~~~~~--~i~iwd~~~~~~  338 (490)
                      .+.+..+|-.++  ..+|.+.+-.-.......++.. +... ...+-...++++.....-+  .+.  ...+.-......
T Consensus       132 ec~~f~~GVavl--t~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~--v~~~v~~~~~q~~~~~~  207 (829)
T KOG2280|consen  132 ECRFFHNGVAVL--TVSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLD--VDVAVGLHICQVEESRV  207 (829)
T ss_pred             EEEEecCceEEE--ecCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEe--echhhhhcccceecccc
Confidence            555554553333  3445555443222222333322 1111 1122222222221111100  000  001111111111


Q ss_pred             CeEEEecc-CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecce
Q psy17682        339 PIVMVELD-TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEI  415 (490)
Q Consensus       339 ~~~~~~~~-~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~  415 (490)
                        ....+. ....+..+..||+.++| +--...|.|.+-+....+.+...-  ...+.+-..++|..+...+++-...
T Consensus       208 --q~~~~~~~~~~~~ki~VS~n~~~l-aLyt~~G~i~~vs~D~~~~lce~~--~~~~~~p~qm~WcgndaVvl~~e~~  280 (829)
T KOG2280|consen  208 --QLHALSWPNSSVVKISVSPNRRFL-ALYTETGKIWVVSIDLSQILCEFN--CTDHDPPKQMAWCGNDAVVLSWEVN  280 (829)
T ss_pred             --cccccCCCCceEEEEEEcCCcceE-EEEecCCcEEEEecchhhhhhccC--CCCCCchHhceeecCCceEEEEeee
Confidence              111111 23568889999999999 667788999888887765332211  1122344578888766544443333

>PHA03098 kelch-like protein; Provisional

Probab=94.98  E-value=1.6  Score=44.36  Aligned_cols=147  Identities=10%  Similarity=0.042  Sum_probs=71.0

Q ss_pred             CEEEEEeCCC------cEEEEECCCCeeEEEEec---CCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceee
Q psy17682        229 NVLLTAGSDN------NVAIWNVGTGEIMIQIEC---HPDIVYSASWNWDGSKLLTTCKD-----KKMRIINPRTGAIEE  294 (490)
Q Consensus       229 ~~l~s~~~dg------~v~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~  294 (490)
                      .+++.||.++      .+..||..+.+-. .+..   .......+.+  +++.++.|+.+     ..+..||..+.+-..
T Consensus       296 ~lyv~GG~~~~~~~~~~v~~yd~~~~~W~-~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~  372 (534)
T PHA03098        296 VIYFIGGMNKNNLSVNSVVSYDTKTKSWN-KVPELIYPRKNPGVTVF--NNRIYVIGGIYNSISLNTVESWKPGESKWRE  372 (534)
T ss_pred             EEEEECCCcCCCCeeccEEEEeCCCCeee-ECCCCCcccccceEEEE--CCEEEEEeCCCCCEecceEEEEcCCCCceee
Confidence            3777777543      5778888766532 2221   1111222222  57777888765     347788887664322


Q ss_pred             eeeecCCCceeEEEEeCCCcEEEEEeCCCc---eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC-
Q psy17682        295 EAVCHEGSKATRAIYLKSGLIFTTGFSKMS---ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD-  370 (490)
Q Consensus       295 ~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~---~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d-  370 (490)
                      .-.... ......+..-++++++.|+....   -..+..||+.+..-.. .........-.+++ ..++ .|++.|+.+ 
T Consensus       373 ~~~lp~-~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~r~~~~~~-~~~~-~iyv~GG~~~  448 (534)
T PHA03098        373 EPPLIF-PRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSK-GSPLPISHYGGCAI-YHDG-KIYVIGGISY  448 (534)
T ss_pred             CCCcCc-CCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeee-cCCCCccccCceEE-EECC-EEEEECCccC
Confidence            111111 11111222346777777762211   2568888887643111 11111111111122 2233 455777643 


Q ss_pred             -------CeEEEEEecCCC
Q psy17682        371 -------SVIRYFEITAEP  382 (490)
Q Consensus       371 -------g~i~iwd~~~~~  382 (490)
                             ..+.+||..+++
T Consensus       449 ~~~~~~~~~v~~yd~~~~~  467 (534)
T PHA03098        449 IDNIKVYNIVESYNPVTNK  467 (534)
T ss_pred             CCCCcccceEEEecCCCCc
Confidence                   237888888764

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=94.92  E-value=2.6  Score=37.53  Aligned_cols=193  Identities=11%  Similarity=0.035  Sum_probs=108.7

Q ss_pred             CEEEEEEeeCCCCEEEEEeCCC--cEEEEECCCCeeEEEEecC-CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Q psy17682        217 RVGLVLWHPTAQNVLLTAGSDN--NVAIWNVGTGEIMIQIECH-PDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIE  293 (490)
Q Consensus       217 ~v~~~~~~p~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  293 (490)
                      -.-.+.|..++. ++-+.|.-|  .|+.+|+.+++......-. .---..++.. +++.....=.++...+||..+.+.+
T Consensus        46 FTQGL~~~~~g~-LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~-~d~l~qLTWk~~~~f~yd~~tl~~~  123 (264)
T PF05096_consen   46 FTQGLEFLDDGT-LYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL-GDKLYQLTWKEGTGFVYDPNTLKKI  123 (264)
T ss_dssp             EEEEEEEEETTE-EEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE-TTEEEEEESSSSEEEEEETTTTEEE
T ss_pred             cCccEEecCCCE-EEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE-CCEEEEEEecCCeEEEEccccceEE
Confidence            346788877774 777777766  7999999999877665521 1122334444 3344555557899999999999888


Q ss_pred             eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCC---ceeeeeecCCCCeEEEEecCC
Q psy17682        294 EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSN---GVMFPLYDPDTNLVYLCGKGD  370 (490)
Q Consensus       294 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~---~i~~~~~s~~~~~l~~~g~~d  370 (490)
                      .++.-...  -..++  .+|..|+.+.   ....++++|..+.+....+.......   .++-+.+- +| .|+|=.-..
T Consensus       124 ~~~~y~~E--GWGLt--~dg~~Li~SD---GS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G-~IyANVW~t  194 (264)
T PF05096_consen  124 GTFPYPGE--GWGLT--SDGKRLIMSD---GSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NG-KIYANVWQT  194 (264)
T ss_dssp             EEEE-SSS----EEE--ECSSCEEEE----SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TT-EEEEEETTS
T ss_pred             EEEecCCc--ceEEE--cCCCEEEEEC---CccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cC-EEEEEeCCC
Confidence            88864322  34454  4455555443   36689999988765433332222222   24555554 34 444555455


Q ss_pred             CeEEEEEecCCCCeeEEee-------------eeeCCCceeeEEEeeCc-eeEEeecceeEEEEe
Q psy17682        371 SVIRYFEITAEPPFVHYIN-------------TFQTPDPQRGIGMMPKR-GCDVNSCEIGRFFRL  421 (490)
Q Consensus       371 g~i~iwd~~~~~~~~~~~~-------------~~~~~~~i~~~~~sp~~-~~l~~~~~~~~~~~~  421 (490)
                      ..|..-|..+|+ +...+.             ......-.+++|+.|+. .++++|-.--++|.+
T Consensus       195 d~I~~Idp~tG~-V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK~Wp~lyeV  258 (264)
T PF05096_consen  195 DRIVRIDPETGK-VVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGKLWPKLYEV  258 (264)
T ss_dssp             SEEEEEETTT-B-EEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEETT-SEEEEE
T ss_pred             CeEEEEeCCCCe-EEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeCCCCceEEE
Confidence            566666777775 111110             00112357999999865 566666555566654

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=94.71  E-value=0.5  Score=41.69  Aligned_cols=143  Identities=8%  Similarity=0.136  Sum_probs=83.5

Q ss_pred             EEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC--CCCeEE--EeccCCCceeeeeec
Q psy17682        282 MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL--DEPIVM--VELDTSNGVMFPLYD  357 (490)
Q Consensus       282 i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~--~~~~~~--~~~~~~~~i~~~~~s  357 (490)
                      -.+||+.+++.. .+......-...-.+.+||+++.+|+.......+++++....  .+....  ........--.+.--
T Consensus        48 s~~yD~~tn~~r-pl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L  126 (243)
T PF07250_consen   48 SVEYDPNTNTFR-PLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTL  126 (243)
T ss_pred             EEEEecCCCcEE-eccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceEC
Confidence            567898887643 333333333455568899999999986545567888886541  111110  012223334455566


Q ss_pred             CCCCeEEEEecCCCeEEEEEecCC--CCe-eEEeeeee---CCCceeeEEEeeCceeEEeecceeEEEEecCCC
Q psy17682        358 PDTNLVYLCGKGDSVIRYFEITAE--PPF-VHYINTFQ---TPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSG  425 (490)
Q Consensus       358 ~~~~~l~~~g~~dg~i~iwd~~~~--~~~-~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~~  425 (490)
                      |||+.|++.|.......+|.-...  .+. ...+....   ...--..+...|+|++++.+.....+|+....+
T Consensus       127 ~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s~i~d~~~n~  200 (243)
T PF07250_consen  127 PDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGSIIYDYKTNT  200 (243)
T ss_pred             CCCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCcEEEeCCCCe
Confidence            899999665555445566654321  111 11111111   111234567789999999998888999988876

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>PHA02790 Kelch-like protein; Provisional

Probab=94.65  E-value=2.4  Score=42.27  Aligned_cols=145  Identities=10%  Similarity=0.002  Sum_probs=71.0

Q ss_pred             CEEEEEeCCC-----cEEEEECCCCeeEEE--EecCCCcEEEEEEcCCCCEEEEEeCC--CeEEEEeCCCCceeeeeeec
Q psy17682        229 NVLLTAGSDN-----NVAIWNVGTGEIMIQ--IECHPDIVYSASWNWDGSKLLTTCKD--KKMRIINPRTGAIEEEAVCH  299 (490)
Q Consensus       229 ~~l~s~~~dg-----~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~  299 (490)
                      .++++||.++     .+..||..+.+-...  +.........+.  -++...+.|+.+  .++..||..+.+-...-.-.
T Consensus       273 ~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~--~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~  350 (480)
T PHA02790        273 VVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVP--ANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLL  350 (480)
T ss_pred             EEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEE--ECCEEEEECCcCCCCceEEEECCCCeEEECCCCC
Confidence            4677787643     467788877653221  111111111222  357777777754  35788887655432211111


Q ss_pred             CCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        300 EGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       300 ~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                       ..........-+|++.+.|+.++....+..||.++..-. ..........-.++ ..- +..|++.|+   .+.+||..
T Consensus       351 -~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~-~~~~m~~~r~~~~~-~~~-~~~IYv~GG---~~e~ydp~  423 (480)
T PHA02790        351 -KPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQ-FGPSTYYPHYKSCA-LVF-GRRLFLVGR---NAEFYCES  423 (480)
T ss_pred             -CCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEE-eCCCCCCccccceE-EEE-CCEEEEECC---ceEEecCC
Confidence             111122233446888888775433456778887754311 00001111111111 122 345667773   57788887


Q ss_pred             CCC
Q psy17682        380 AEP  382 (490)
Q Consensus       380 ~~~  382 (490)
                      +++
T Consensus       424 ~~~  426 (480)
T PHA02790        424 SNT  426 (480)
T ss_pred             CCc
Confidence            764

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=94.60  E-value=1.1  Score=45.37  Aligned_cols=114  Identities=12%  Similarity=-0.013  Sum_probs=72.0

Q ss_pred             eeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeee--cCCCCeEEEEecCCCeEEEEEe---
Q psy17682        304 ATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLY--DPDTNLVYLCGKGDSVIRYFEI---  378 (490)
Q Consensus       304 ~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~--s~~~~~l~~~g~~dg~i~iwd~---  378 (490)
                      +..+.-+.-++..++..   ....+.|||.+..... ....+.....|.++.|  .|+|+.+++.| -.+.|.+|.-   
T Consensus        32 ~~li~gss~~k~a~V~~---~~~~LtIWD~~~~~lE-~~~~f~~~~~I~dLDWtst~d~qsiLaVG-f~~~v~l~~Q~R~  106 (631)
T PF12234_consen   32 PSLISGSSIKKIAVVDS---SRSELTIWDTRSGVLE-YEESFSEDDPIRDLDWTSTPDGQSILAVG-FPHHVLLYTQLRY  106 (631)
T ss_pred             cceEeecccCcEEEEEC---CCCEEEEEEcCCcEEE-EeeeecCCCceeeceeeecCCCCEEEEEE-cCcEEEEEEccch
Confidence            44444445555555544   4668999999976521 1222344667888876  57899985555 6777887743   


Q ss_pred             --cCCCCeeEEeeee---e-CCCceeeEEEeeCceeEEeecceeEEEEec
Q psy17682        379 --TAEPPFVHYINTF---Q-TPDPQRGIGMMPKRGCDVNSCEIGRFFRLN  422 (490)
Q Consensus       379 --~~~~~~~~~~~~~---~-~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~  422 (490)
                        ....|-...+..+   . .+.+|.+..|.++|.++++++..+.+++-+
T Consensus       107 dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sGNqlfv~dk~  156 (631)
T PF12234_consen  107 DYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSGNQLFVFDKW  156 (631)
T ss_pred             hhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeCCEEEEECCC
Confidence              2222222222222   1 236899999999999988888877777643

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>KOG4499|consensus

Probab=94.54  E-value=2.8  Score=36.18  Aligned_cols=93  Identities=14%  Similarity=0.223  Sum_probs=66.8

Q ss_pred             EEEEEeeCCCCEEEEEeCCCcEEEEE--CCCCe-----eEEEEec----CCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy17682        219 GLVLWHPTAQNVLLTAGSDNNVAIWN--VGTGE-----IMIQIEC----HPDIVYSASWNWDGSKLLTTCKDKKMRIINP  287 (490)
Q Consensus       219 ~~~~~~p~~~~~l~s~~~dg~v~iwd--~~~~~-----~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~  287 (490)
                      ..++|+.+.+.+.++-+.+-+|.-||  ..+|.     .+..++.    ..-..-.++..-+|++.+++-..++|...|.
T Consensus       161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp  240 (310)
T KOG4499|consen  161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDP  240 (310)
T ss_pred             ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECC
Confidence            57889888766677777788887787  44443     3333331    1111234555668888898888999999999


Q ss_pred             CCCceeeeeeecCCCceeEEEEeCC
Q psy17682        288 RTGAIEEEAVCHEGSKATRAIYLKS  312 (490)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~s~~  312 (490)
                      .+|+.+.+++.... .+++++|--.
T Consensus       241 ~tGK~L~eiklPt~-qitsccFgGk  264 (310)
T KOG4499|consen  241 TTGKILLEIKLPTP-QITSCCFGGK  264 (310)
T ss_pred             CCCcEEEEEEcCCC-ceEEEEecCC
Confidence            99999999987755 4899998644

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=94.49  E-value=3.6  Score=37.22  Aligned_cols=208  Identities=11%  Similarity=0.121  Sum_probs=116.4

Q ss_pred             CEEEEEEeeCCCCEEEEEeCCCcEEEEECC------CC-eeEEEEec-----CCCcEEEEEEcCCCC------------E
Q psy17682        217 RVGLVLWHPTAQNVLLTAGSDNNVAIWNVG------TG-EIMIQIEC-----HPDIVYSASWNWDGS------------K  272 (490)
Q Consensus       217 ~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~------~~-~~~~~~~~-----~~~~v~~~~~~~~~~------------~  272 (490)
                      .-+.|+++|.+. +-++....+...+||..      .. ..+..+..     .....+.+.|+....            .
T Consensus        24 N~WGia~~p~~~-~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~  102 (336)
T TIGR03118        24 NAWGLSYRPGGP-FWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSR  102 (336)
T ss_pred             ccceeEecCCCC-EEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCccccee
Confidence            458999999985 77777777899999986      12 22333331     234567777774332            3


Q ss_pred             EEEEeCCCeEEEEeCCCCce-----eeeee-ecCCCceeEEEEeCC--CcEEEEEeCCCceeEEEEecCCCCCCC-----
Q psy17682        273 LLTTCKDKKMRIINPRTGAI-----EEEAV-CHEGSKATRAIYLKS--GLIFTTGFSKMSERQYSLRAPDHLDEP-----  339 (490)
Q Consensus       273 l~~~~~dg~i~iwd~~~~~~-----~~~~~-~~~~~~~~~~~~s~~--~~~l~~~~~~~~~~~i~iwd~~~~~~~-----  339 (490)
                      ++.+++||+|.-|...-...     ...+. ...+.....+++...  +.+|....-  ..++|.++|-.-....     
T Consensus       103 Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF--~~g~IDVFd~~f~~~~~~g~F  180 (336)
T TIGR03118       103 FLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANF--RQGRIDVFKGSFRPPPLPGSF  180 (336)
T ss_pred             EEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEecc--CCCceEEecCccccccCCCCc
Confidence            67788999999998543322     11121 122344455665543  445544432  5788999986532211     


Q ss_pred             -----------eEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee----
Q psy17682        340 -----------IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP----  404 (490)
Q Consensus       340 -----------~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp----  404 (490)
                                 ..++.+...--|+-..-.++.+.= +.|..-|.|-+||....  +++.+..-..-..-++|+..|    
T Consensus       181 ~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~-v~G~G~G~VdvFd~~G~--l~~r~as~g~LNaPWG~a~APa~FG  257 (336)
T TIGR03118       181 IDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDE-VAGAGLGYVNVFTLNGQ--LLRRVASSGRLNAPWGLAIAPESFG  257 (336)
T ss_pred             cCCCCCCCCCCcceEEECCeEEEEEEecCCccccc-ccCCCcceEEEEcCCCc--EEEEeccCCcccCCceeeeChhhhC
Confidence                       111111111112222223333332 34556689999998764  222232222224457788866    


Q ss_pred             --CceeEEee--cceeEEEEecCCCceEEE
Q psy17682        405 --KRGCDVNS--CEIGRFFRLNNSGLCQVV  430 (490)
Q Consensus       405 --~~~~l~~~--~~~~~~~~~~~~~~~~~i  430 (490)
                        .+.+|+..  ++.+..|+..++..+.++
T Consensus       258 ~~sg~lLVGNFGDG~InaFD~~sG~~~g~L  287 (336)
T TIGR03118       258 SLSGALLVGNFGDGTINAYDPQSGAQLGQL  287 (336)
T ss_pred             CCCCCeEEeecCCceeEEecCCCCceeeee
Confidence              35677765  668888998877755554

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.23  E-value=0.24  Score=29.99  Aligned_cols=33  Identities=18%  Similarity=0.257  Sum_probs=27.3

Q ss_pred             CCeeEEEECCCCC--CEEEEEeCCCcEEEEECCCC
Q psy17682        166 GPVLDIAWSPHDD--NVIASGSEDCVVKVWQIPDG  198 (490)
Q Consensus       166 ~~V~~~~~~p~~~--~~l~s~~~dg~i~iwd~~~~  198 (490)
                      +.|.+++|+|...  .+|+-+-.-|.|.|+|++++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~   35 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN   35 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence            4789999998664  68888888899999999853

It contains a characteristic DLL sequence motif.

>KOG1897|consensus

Probab=94.10  E-value=9  Score=40.32  Aligned_cols=305  Identities=11%  Similarity=0.075  Sum_probs=143.9

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      ......|-.+-..|+..-++|  .|+.||.-|.=.+-.+.+..-.    ..+       ........      ....+..
T Consensus       298 lkve~lge~siassi~~L~ng--~lFvGS~~gdSqLi~L~~e~d~----gsy-------~~ilet~~------NLgPI~D  358 (1096)
T KOG1897|consen  298 LKVEYLGETSIASSINYLDNG--VLFVGSRFGDSQLIKLNTEPDV----GSY-------VVILETFV------NLGPIVD  358 (1096)
T ss_pred             EEEEecCCcchhhhhhcccCc--eEEEeccCCceeeEEccccCCC----Cch-------hhhhhhcc------cccceee
Confidence            344455666666777777665  4666777665455555442210    000       00000000      0012334


Q ss_pred             eEecccc--ccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEE--ECCCCCCEEEEEeCCCcEE
Q psy17682        116 ITISEDY--VKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIA--WSPHDDNVIASGSEDCVVK  191 (490)
Q Consensus       116 ~~~s~~~--~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~--~~p~~~~~l~s~~~dg~i~  191 (490)
                      +++-...  .+.-.-....+..+|+++++...     .+-.......+.| -..++.+.  +.+.-+++++.+--+. -+
T Consensus       359 m~Vvd~d~q~q~qivtCsGa~kdgSLRiiRng-----i~I~e~A~i~l~G-ikg~w~lk~~v~~~~d~ylvlsf~~e-Tr  431 (1096)
T KOG1897|consen  359 MCVVDLDRQGQGQIVTCSGAFKDGSLRIIRNG-----IGIDELASIDLPG-IKGMWSLKSMVDENYDNYLVLSFISE-TR  431 (1096)
T ss_pred             EEEEeccccCCceEEEEeCCCCCCcEEEEecc-----cccceeeEeecCC-ccceeEeeccccccCCcEEEEEeccc-eE
Confidence            4332222  11111122334568889988653     1111111223445 45677777  5554445666654443 34


Q ss_pred             EEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCC
Q psy17682        192 VWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS  271 (490)
Q Consensus       192 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~  271 (490)
                      +..+... .... .     ..+.......+..+--+.+.|+-... ..||+++-.  ..+.... ..+.++....+.+..
T Consensus       432 vl~i~~e-~ee~-~-----~~gf~~~~~Tif~S~i~g~~lvQvTs-~~iRl~ss~--~~~~~W~-~p~~~ti~~~~~n~s  500 (1096)
T KOG1897|consen  432 VLNISEE-VEET-E-----DPGFSTDEQTIFCSTINGNQLVQVTS-NSIRLVSSA--GLRSEWR-PPGKITIGVVSANAS  500 (1096)
T ss_pred             EEEEccc-eEEe-c-----cccccccCceEEEEccCCceEEEEec-ccEEEEcch--hhhhccc-CCCceEEEEEeecce
Confidence            4454322 1110 0     11122223333333322223333332 457777643  2233333 233444444455556


Q ss_pred             EEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCC------cEEEEEeCCCceeEEEEecCCCCCCCeEEEec
Q psy17682        272 KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG------LIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL  345 (490)
Q Consensus       272 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~  345 (490)
                      .++.++.++.+...++..+.............+.|+.++|-|      +++++|.   .+..+.+--.............
T Consensus       501 qVvvA~~~~~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~---Ws~~~~~l~~~pd~~~~~~~~l  577 (1096)
T KOG1897|consen  501 QVVVAGGGLALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGL---WSDISMILTFLPDLILITHEQL  577 (1096)
T ss_pred             EEEEecCccEEEEEEeeccceeeeeeheecceeEEEecccCCCCCCcceEEEEEe---ecceEEEEEECCCcceeeeecc
Confidence            777777778888777776653322222222348889888752      3677776   3333332222211221221111


Q ss_pred             c---CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        346 D---TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       346 ~---~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      .   -...|.-..|-.|..+| .++..||.+.-|-+...
T Consensus       578 ~~~~iPRSIl~~~~e~d~~yL-lvalgdG~l~~fv~d~~  615 (1096)
T KOG1897|consen  578 SGEIIPRSILLTTFEGDIHYL-LVALGDGALLYFVLDIN  615 (1096)
T ss_pred             CCCccchheeeEEeeccceEE-EEEcCCceEEEEEEEcc
Confidence            1   12345556666677888 67888998887766543

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=93.92  E-value=5  Score=38.01  Aligned_cols=151  Identities=13%  Similarity=0.088  Sum_probs=85.2

Q ss_pred             CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEE----EeCCCcE--EEEEeCCCc-eeEEEEecCCCCCCCeE
Q psy17682        269 DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAI----YLKSGLI--FTTGFSKMS-ERQYSLRAPDHLDEPIV  341 (490)
Q Consensus       269 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~s~~~~~--l~~~~~~~~-~~~i~iwd~~~~~~~~~  341 (490)
                      ...+++....++-+.+||+. |+.++.+..  + .+..+.    |.-.|+.  |++++++.. ...|++|.+......+.
T Consensus        67 ~kSlIigTdK~~GL~VYdL~-Gk~lq~~~~--G-r~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~  142 (381)
T PF02333_consen   67 AKSLIIGTDKKGGLYVYDLD-GKELQSLPV--G-RPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELT  142 (381)
T ss_dssp             GG-EEEEEETTTEEEEEETT-S-EEEEE-S--S--EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEE
T ss_pred             ccceEEEEeCCCCEEEEcCC-CcEEEeecC--C-CcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcce
Confidence            44678888888999999998 444555531  1 132222    2223443  455553211 25789997764322221


Q ss_pred             EEe-c-----cCCCceeeeee--cC-CCCeEEEEecCCCeEEEEEecC---CCCeeEEeeeeeCCCceeeEEEeeCceeE
Q psy17682        342 MVE-L-----DTSNGVMFPLY--DP-DTNLVYLCGKGDSVIRYFEITA---EPPFVHYINTFQTPDPQRGIGMMPKRGCD  409 (490)
Q Consensus       342 ~~~-~-----~~~~~i~~~~~--s~-~~~~l~~~g~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~i~~~~~sp~~~~l  409 (490)
                      ... .     .....+..+|+  ++ +|.+.++....+|.+..|.+..   +..-.+.+..+.....+-++........|
T Consensus       143 ~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~L  222 (381)
T PF02333_consen  143 DVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGRL  222 (381)
T ss_dssp             E-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTEE
T ss_pred             EcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCCE
Confidence            111 0     11123555655  33 5666556778899999998863   22233566667766678888888887788


Q ss_pred             EeecceeEEEEecC
Q psy17682        410 VNSCEIGRFFRLNN  423 (490)
Q Consensus       410 ~~~~~~~~~~~~~~  423 (490)
                      ..+.+..-||+...
T Consensus       223 YvgEE~~GIW~y~A  236 (381)
T PF02333_consen  223 YVGEEDVGIWRYDA  236 (381)
T ss_dssp             EEEETTTEEEEEES
T ss_pred             EEecCccEEEEEec
Confidence            88888888888754

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>KOG1916|consensus

Probab=93.85  E-value=0.057  Score=54.84  Aligned_cols=210  Identities=15%  Similarity=0.118  Sum_probs=116.4

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC--CCCcccccccceeeecccccCEEEEEEee---CCCCEEEEE
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP--DGGISRTLTEPVVDLLYHQRRVGLVLWHP---TAQNVLLTA  234 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~p---~~~~~l~s~  234 (490)
                      .++|..+.|-.++|-..+...+.  -.-|.+.+|++.  .|+....+...  ........+.-+.|.|   +. -++..+
T Consensus       127 l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~--~~~p~gs~~~~V~wcp~~~~~-~~ic~~  201 (1283)
T KOG1916|consen  127 LAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVT--PITPYGSDPQLVSWCPIAVNK-VYICYG  201 (1283)
T ss_pred             HHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEe--ecCcCCCCcceeeeccccccc-ceeeec
Confidence            45688889999998543322222  333678899876  34333222111  1111223345555554   43 366667


Q ss_pred             eCCCcEEEEECCCCeeEEEEecCCCcEEEE-----------EEcCCCCEEEEEeCCCeEEEEeCC-----CCceeeeeee
Q psy17682        235 GSDNNVAIWNVGTGEIMIQIECHPDIVYSA-----------SWNWDGSKLLTTCKDKKMRIINPR-----TGAIEEEAVC  298 (490)
Q Consensus       235 ~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~~l~~~~~dg~i~iwd~~-----~~~~~~~~~~  298 (490)
                      -.++.+++........ ..+.+|...+..+           ..+|||..++..+.||.++.|-+.     ...++...+.
T Consensus       202 ~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkp  280 (1283)
T KOG1916|consen  202 LKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKP  280 (1283)
T ss_pred             cCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCC
Confidence            7788888877654322 2233455544433           268999999999999987777553     3455666666


Q ss_pred             cCCCceeEEEEeCC-------C--cEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeE------
Q psy17682        299 HEGSKATRAIYLKS-------G--LIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLV------  363 (490)
Q Consensus       299 ~~~~~~~~~~~s~~-------~--~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l------  363 (490)
                      |.+.+..|..++.+       +  .+++++++  ..+.+++|.....+|+....    ..+|..+. -++|..-      
T Consensus       281 hd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd--~nre~k~w~~a~w~Cll~~~----~d~v~iV~-p~~~~v~~~~~~~  353 (1283)
T KOG1916|consen  281 HDKHPRVCWLCHKQEILVVSIGKWVLRITTTD--VNREEKFWAEAPWQCLLDKL----IDGVQIVG-PHDGEVTDLSMCQ  353 (1283)
T ss_pred             CCCCCceeeeeccccccCCccceeEEEEeccc--CCcceeEeeccchhhhhhhc----ccceEeec-CCCccccchhhhH
Confidence            66433333335433       2  24455553  46778999888777652211    12333333 2233211      


Q ss_pred             -----EEEecCCCeEEEEEecCCC
Q psy17682        364 -----YLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       364 -----~~~g~~dg~i~iwd~~~~~  382 (490)
                           .++.+-++.|.+|.-..-.
T Consensus       354 ~~~~~~v~r~v~~~i~~~qn~~a~  377 (1283)
T KOG1916|consen  354 WMTTRLVSRSVDGTIKIWQNRKAQ  377 (1283)
T ss_pred             HHHHHHHHhhhHHHHHHhhcchhh
Confidence                 1234567888888765543

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=93.37  E-value=0.38  Score=29.00  Aligned_cols=41  Identities=17%  Similarity=0.368  Sum_probs=27.9

Q ss_pred             CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEE
Q psy17682        358 PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGM  402 (490)
Q Consensus       358 ~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~  402 (490)
                      |++++||++...++.|.++|..+++    .+.....+..-.+++|
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~----~~~~i~vg~~P~~i~~   41 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNK----VIATIPVGGYPFGVAV   41 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCe----EEEEEECCCCCceEEe
Confidence            6889998888888999999998775    3333333333445544

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=93.33  E-value=0.34  Score=29.33  Aligned_cols=32  Identities=19%  Similarity=0.214  Sum_probs=26.3

Q ss_pred             cCEEEEEEeeCCC--CEEEEEeCCCcEEEEECCC
Q psy17682        216 RRVGLVLWHPTAQ--NVLLTAGSDNNVAIWNVGT  247 (490)
Q Consensus       216 ~~v~~~~~~p~~~--~~l~s~~~dg~v~iwd~~~  247 (490)
                      +.|.++.|+|...  .+|+.+-..|.|.|+|+++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            3589999998653  4888888889999999985

It contains a characteristic DLL sequence motif.

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=93.22  E-value=6.7  Score=35.98  Aligned_cols=170  Identities=13%  Similarity=0.124  Sum_probs=92.3

Q ss_pred             cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCC-----CCEEEEEeCCCcEEEEECCCCeeEEEEec-------
Q psy17682        189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTA-----QNVLLTAGSDNNVAIWNVGTGEIMIQIEC-------  256 (490)
Q Consensus       189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-----~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-------  256 (490)
                      +|.+||+.+++.++.+.-|..... ..+.+..+.+....     ....++=...+-|.|+|+.+++..+.+..       
T Consensus        35 KLv~~Dl~t~~li~~~~~p~~~~~-~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~  113 (287)
T PF03022_consen   35 KLVAFDLKTNQLIRRYPFPPDIAP-PDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPD  113 (287)
T ss_dssp             EEEEEETTTTCEEEEEE--CCCS--TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-S
T ss_pred             EEEEEECCCCcEEEEEECChHHcc-cccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceecc
Confidence            678889999988887765544443 45678888887732     12333434446899999998875544331       


Q ss_pred             ------------CCCcEEEEEEcC---CCCEEEEEeCCCeEEEEeCC-----CCce---e-----eeeeecCCCceeEEE
Q psy17682        257 ------------HPDIVYSASWNW---DGSKLLTTCKDKKMRIINPR-----TGAI---E-----EEAVCHEGSKATRAI  308 (490)
Q Consensus       257 ------------~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~-----~~~~---~-----~~~~~~~~~~~~~~~  308 (490)
                                  ....+..++.+|   +++.|.-....+ -++|.+.     ....   .     .+..+..+.....++
T Consensus       114 ~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss-~~ly~v~T~~L~~~~~~~~~~~~~~v~~lG~k~~~s~g~~  192 (287)
T PF03022_consen  114 AGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSS-RKLYRVPTSVLRDPSLSDAQALASQVQDLGDKGSQSDGMA  192 (287)
T ss_dssp             SEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT--SEEEEEEHHHHCSTT--HHH-HHHT-EEEEE---SECEEE
T ss_pred             ccceeccCceEecCCCccccccCCCCCCccEEEEEeCCC-CcEEEEEHHHhhCccccccccccccceeccccCCCCceEE
Confidence                        112356666665   555666554332 1233222     1110   0     011133333477889


Q ss_pred             EeCCCcEEEEEeCCCceeEEEEecCCCCCCCeE--EEeccC--CCceeeeeecC--CCCeE
Q psy17682        309 YLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIV--MVELDT--SNGVMFPLYDP--DTNLV  363 (490)
Q Consensus       309 ~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~--~~~~~~--~~~i~~~~~s~--~~~~l  363 (490)
                      ++++|.++.+--   ..+.|..|+..+.-.+..  ......  -.....+.+.+  +|.+.
T Consensus       193 ~D~~G~ly~~~~---~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~  250 (287)
T PF03022_consen  193 IDPNGNLYFTDV---EQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLW  250 (287)
T ss_dssp             EETTTEEEEEEC---CCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EE
T ss_pred             ECCCCcEEEecC---CCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEE
Confidence            999999888776   678999999886322211  111111  23456777777  55544

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>KOG1898|consensus

Probab=93.21  E-value=7.9  Score=41.00  Aligned_cols=176  Identities=7%  Similarity=-0.027  Sum_probs=93.9

Q ss_pred             cEEEEECCCCeeEEEEecCC----CcEEEEEEcCCCC--EEEEEe-----------CCCeEEEEeCCCCceeeeeeecCC
Q psy17682        239 NVAIWNVGTGEIMIQIECHP----DIVYSASWNWDGS--KLLTTC-----------KDKKMRIINPRTGAIEEEAVCHEG  301 (490)
Q Consensus       239 ~v~iwd~~~~~~~~~~~~~~----~~v~~~~~~~~~~--~l~~~~-----------~dg~i~iwd~~~~~~~~~~~~~~~  301 (490)
                      .|++.|..+++.+..+....    -.+..+.|+..+.  +++++.           .+|.++.|++-.....-.+..+..
T Consensus       854 ~I~~~d~~s~~~~~~~~l~~ne~a~~v~~~~fs~~~~~~~~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g~~lellh~T~  933 (1205)
T KOG1898|consen  854 SIRVFDPKSGKIICLVELGQNEAAFSVCAVDFSSSEYQPFVAVGVATTEQLDSKSISSGFVYTYKFVRNGDKLELLHKTE  933 (1205)
T ss_pred             eEEEEcCCCCceEEEEeecCCcchhheeeeeeccCCCceEEEEEeeccccccccccCCCceEEEEEEecCceeeeeeccC
Confidence            48888988888777665222    2356666765333  344443           234567776543222222322333


Q ss_pred             CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        302 SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       302 ~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      .+-.-.+..|-...+.+|-    ...+++||+...+.............|+.+.+  .+..+ +.|...-.+.++..+..
T Consensus       934 ~~~~v~Ai~~f~~~~Lagv----G~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt--~~~RI-~VgD~qeSV~~~~y~~~ 1006 (1205)
T KOG1898|consen  934 IPGPVGAICPFQGRVLAGV----GRFLRLYDLGKKKLLRKCELKFIPNRISSIQT--YGARI-VVGDIQESVHFVRYRRE 1006 (1205)
T ss_pred             CCccceEEeccCCEEEEec----ccEEEEeeCChHHHHhhhhhccCceEEEEEee--cceEE-EEeeccceEEEEEEecC
Confidence            2233445566655666664    77899999987543322222112345666655  35566 45544445665555554


Q ss_pred             CCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEec
Q psy17682        382 PPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLN  422 (490)
Q Consensus       382 ~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~  422 (490)
                      .........-..+..++.+.+-..+ .++.++..+++|-+.
T Consensus      1007 ~n~l~~fadD~~pR~Vt~~~~lD~~-tvagaDrfGNi~~vR 1046 (1205)
T KOG1898|consen 1007 DNQLIVFADDPVPRHVTALELLDYD-TVAGADRFGNIAVVR 1046 (1205)
T ss_pred             CCeEEEEeCCCccceeeEEEEecCC-ceeeccccCcEEEEE
Confidence            4333333322334556666666554 446667776777654

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=93.13  E-value=2.3  Score=40.06  Aligned_cols=105  Identities=12%  Similarity=0.190  Sum_probs=60.0

Q ss_pred             eeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec-----cCCCceeeeeecCC---CCeEEEEecCC-----
Q psy17682        304 ATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-----DTSNGVMFPLYDPD---TNLVYLCGKGD-----  370 (490)
Q Consensus       304 ~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-----~~~~~i~~~~~s~~---~~~l~~~g~~d-----  370 (490)
                      .+.++|.|+|+++++-    ..|.|++++... .....+...     ....+...++++|+   ..+||++.+..     
T Consensus         4 P~~~a~~pdG~l~v~e----~~G~i~~~~~~g-~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~   78 (331)
T PF07995_consen    4 PRSMAFLPDGRLLVAE----RSGRIWVVDKDG-SLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGG   78 (331)
T ss_dssp             EEEEEEETTSCEEEEE----TTTEEEEEETTT-EECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSS
T ss_pred             ceEEEEeCCCcEEEEe----CCceEEEEeCCC-cCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCC
Confidence            7889999999998875    588899988332 221222221     23456889999995   45666666532     


Q ss_pred             ---CeEEEEEecCCCC----eeEEeeeee----CCCceeeEEEeeCceeEEeec
Q psy17682        371 ---SVIRYFEITAEPP----FVHYINTFQ----TPDPQRGIGMMPKRGCDVNSC  413 (490)
Q Consensus       371 ---g~i~iwd~~~~~~----~~~~~~~~~----~~~~i~~~~~sp~~~~l~~~~  413 (490)
                         ..|.-|.+..+..    ....+....    ....-..|+|.|||.+.++.+
T Consensus        79 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G  132 (331)
T PF07995_consen   79 DNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVG  132 (331)
T ss_dssp             SEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB
T ss_pred             CcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeC
Confidence               3455555554411    111222222    224567799999998766553

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=92.99  E-value=6.9  Score=35.49  Aligned_cols=213  Identities=9%  Similarity=0.068  Sum_probs=108.8

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeec-----ccccCEEEEEEeeCCC-----------C
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLL-----YHQRRVGLVLWHPTAQ-----------N  229 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~p~~~-----------~  229 (490)
                      ..-+.|+++|.+ .+-++....+...+||.........-......+.     ......+.+.|+....           .
T Consensus        23 ~N~WGia~~p~~-~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a  101 (336)
T TIGR03118        23 RNAWGLSYRPGG-PFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPS  101 (336)
T ss_pred             cccceeEecCCC-CEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccce
Confidence            346889999977 6677777778999999862110000000011111     1234578888875432           2


Q ss_pred             EEEEEeCCCcEEEEECCCCee-----EEEEec-CCCcE-EEEEEcC--CCCEEEEE-eCCCeEEEEeCCCCcee--eeee
Q psy17682        230 VLLTAGSDNNVAIWNVGTGEI-----MIQIEC-HPDIV-YSASWNW--DGSKLLTT-CKDKKMRIINPRTGAIE--EEAV  297 (490)
Q Consensus       230 ~l~s~~~dg~v~iwd~~~~~~-----~~~~~~-~~~~v-~~~~~~~--~~~~l~~~-~~dg~i~iwd~~~~~~~--~~~~  297 (490)
                      .++.+++||+|.=|...-+..     ...+.. ..+.| ..+++..  .+.+|..+ -..++|.+||-.=.+..  ..+.
T Consensus       102 ~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~  181 (336)
T TIGR03118       102 RFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFI  181 (336)
T ss_pred             eEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCcc
Confidence            367778999999998532211     122221 12333 3455543  24555544 46788999985533211  0111


Q ss_pred             ec---CCCceeEEEEeCCCcEEEE-EeCC---------CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecC------
Q psy17682        298 CH---EGSKATRAIYLKSGLIFTT-GFSK---------MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDP------  358 (490)
Q Consensus       298 ~~---~~~~~~~~~~s~~~~~l~~-~~~~---------~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~------  358 (490)
                      ..   .+.....+.- -.++++++ +-.+         ...|.|.++|+... ....+..-..-..-+.++..|      
T Consensus       182 DP~iPagyAPFnIqn-ig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~-l~~r~as~g~LNaPWG~a~APa~FG~~  259 (336)
T TIGR03118       182 DPALPAGYAPFNVQN-LGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQ-LLRRVASSGRLNAPWGLAIAPESFGSL  259 (336)
T ss_pred             CCCCCCCCCCcceEE-ECCeEEEEEEecCCcccccccCCCcceEEEEcCCCc-EEEEeccCCcccCCceeeeChhhhCCC
Confidence            00   0000011100 01222222 1100         03478999998853 222222222223345555544      


Q ss_pred             CCCeEEEEecCCCeEEEEEecCCC
Q psy17682        359 DTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       359 ~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      .|.+| +.--.||+|..||..+++
T Consensus       260 sg~lL-VGNFGDG~InaFD~~sG~  282 (336)
T TIGR03118       260 SGALL-VGNFGDGTINAYDPQSGA  282 (336)
T ss_pred             CCCeE-EeecCCceeEEecCCCCc
Confidence            45555 555679999999999887

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>KOG2247|consensus

Probab=92.97  E-value=0.017  Score=54.47  Aligned_cols=145  Identities=14%  Similarity=0.177  Sum_probs=99.2

Q ss_pred             ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEE
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIW  243 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iw  243 (490)
                      |-.......|-|.+.+ ++.++.+..+..||- .++......        ..+....++|..+++..++.+-..+.+.+|
T Consensus        33 alv~pi~~~w~~e~~n-lavaca~tiv~~YD~-agq~~le~n--------~tg~aldm~wDkegdvlavlAek~~piylw  102 (615)
T KOG2247|consen   33 ALVGPIIHRWRPEGHN-LAVACANTIVIYYDK-AGQVILELN--------PTGKALDMAWDKEGDVLAVLAEKTGPIYLW  102 (615)
T ss_pred             hccccceeeEecCCCc-eehhhhhhHHHhhhh-hcceecccC--------CchhHhhhhhccccchhhhhhhcCCCeeec
Confidence            3334445678888755 777777889999994 343333222        345567788988888677778888999999


Q ss_pred             ECCCCeeEEEEe-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEe
Q psy17682        244 NVGTGEIMIQIE-CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       244 d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~  320 (490)
                      |+.+... .++. +....-.-+.|++-...++.+...|.+.|++.++.+.+...-.|.. ..++.++.+.+..+..+.
T Consensus       103 d~n~eyt-qqLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~R-Rgtq~av~lEd~vil~dc  178 (615)
T KOG2247|consen  103 DVNSEYT-QQLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQR-RGTQIAVTLEDYVILCDC  178 (615)
T ss_pred             hhhhhhH-HHHhccCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhccccc-ceeEEEecccceeeecCc
Confidence            9975432 2222 1122222377998888999998999999999887765544433554 488999999887776554

>KOG1897|consensus

Probab=92.91  E-value=14  Score=38.95  Aligned_cols=174  Identities=10%  Similarity=0.024  Sum_probs=104.8

Q ss_pred             cEEEEECCCCeeEEEEec-CCC---cEEEEEEcCC-CCEEEEEe----------CCCeEEEEeCCCCceeeeeeec--CC
Q psy17682        239 NVAIWNVGTGEIMIQIEC-HPD---IVYSASWNWD-GSKLLTTC----------KDKKMRIINPRTGAIEEEAVCH--EG  301 (490)
Q Consensus       239 ~v~iwd~~~~~~~~~~~~-~~~---~v~~~~~~~~-~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~--~~  301 (490)
                      .++++|-.+.+.+...+- ...   .+.++.|..| +.++++|+          ..|.|.+|.....+.+.....+  .+
T Consensus       751 ~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~G  830 (1096)
T KOG1897|consen  751 FLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKG  830 (1096)
T ss_pred             EEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeecc
Confidence            367777766665544331 112   2445558776 56777776          2578888887764333333211  12


Q ss_pred             CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        302 SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       302 ~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      . +..+. --+|+++|.-     ...|++|+..+.+..  .....+..++..+...-.|..+ +.|..-+.+.+...+..
T Consensus       831 a-v~aL~-~fngkllA~I-----n~~vrLye~t~~~eL--r~e~~~~~~~~aL~l~v~gdeI-~VgDlm~Sitll~y~~~  900 (1096)
T KOG1897|consen  831 A-VYALV-EFNGKLLAGI-----NQSVRLYEWTTEREL--RIECNISNPIIALDLQVKGDEI-AVGDLMRSITLLQYKGD  900 (1096)
T ss_pred             c-eeehh-hhCCeEEEec-----CcEEEEEEcccccee--hhhhcccCCeEEEEEEecCcEE-EEeeccceEEEEEEecc
Confidence            2 22221 1257777643     568999998875322  2223455677888888889998 67877777777666655


Q ss_pred             CCeeEEeeeeeCCCceeeEEEeeCceeEEee-cceeEEEEec
Q psy17682        382 PPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-CEIGRFFRLN  422 (490)
Q Consensus       382 ~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~~~~~~  422 (490)
                      +.....+...-.+.+++++.+-.+..++.+. ++.+.+.+.+
T Consensus       901 eg~f~evArD~~p~Wmtaveil~~d~ylgae~~gNlf~v~~d  942 (1096)
T KOG1897|consen  901 EGNFEEVARDYNPNWMTAVEILDDDTYLGAENSGNLFTVRKD  942 (1096)
T ss_pred             CCceEEeehhhCccceeeEEEecCceEEeecccccEEEEEec
Confidence            4334455555567789999998888776665 3344444443

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=92.60  E-value=3.3  Score=40.01  Aligned_cols=150  Identities=10%  Similarity=0.119  Sum_probs=89.6

Q ss_pred             EEEEeeCCCCE-EEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCC-------EEEEEeCCCeEEEEeCCCCc
Q psy17682        220 LVLWHPTAQNV-LLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS-------KLLTTCKDKKMRIINPRTGA  291 (490)
Q Consensus       220 ~~~~~p~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~dg~i~iwd~~~~~  291 (490)
                      -+..+.+.+++ +..|+....++-.|++.|+.+.....|..-  -+.|.|+.+       .-++|-.+..|.-.|.|-..
T Consensus       471 K~mlh~~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~g  548 (776)
T COG5167         471 KIMLHDNDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARG  548 (776)
T ss_pred             hceeecCCcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccC
Confidence            33344333344 445566677888899999999988866553  567777432       23445556667767776432


Q ss_pred             -eeeeee--e-cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEe
Q psy17682        292 -IEEEAV--C-HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCG  367 (490)
Q Consensus       292 -~~~~~~--~-~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g  367 (490)
                       .+....  . .......+..-..+| ++++++   ..|-|++||.-.......+.  .-...|..+..+.+|+++++++
T Consensus       549 NKi~v~esKdY~tKn~Fss~~tTesG-yIa~as---~kGDirLyDRig~rAKtalP--~lG~aIk~idvta~Gk~ilaTC  622 (776)
T COG5167         549 NKIKVVESKDYKTKNKFSSGMTTESG-YIAAAS---RKGDIRLYDRIGKRAKTALP--GLGDAIKHIDVTANGKHILATC  622 (776)
T ss_pred             CceeeeeehhccccccccccccccCc-eEEEec---CCCceeeehhhcchhhhcCc--ccccceeeeEeecCCcEEEEee
Confidence             222111  1 111113333333344 566666   68899999976543322222  2335688889999999997766


Q ss_pred             cCCCeEEEEEec
Q psy17682        368 KGDSVIRYFEIT  379 (490)
Q Consensus       368 ~~dg~i~iwd~~  379 (490)
                        ...+.+-|+.
T Consensus       623 --k~yllL~d~~  632 (776)
T COG5167         623 --KNYLLLTDVP  632 (776)
T ss_pred             --cceEEEEecc
Confidence              5678888875

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=92.37  E-value=6.8  Score=40.30  Aligned_cols=114  Identities=11%  Similarity=-0.027  Sum_probs=70.5

Q ss_pred             cEEEEEEcC--CCCEEEEEeCCCeEEEEeCCC-------C-------------ceeeeeeecCCCceeEEEEe--CCCcE
Q psy17682        260 IVYSASWNW--DGSKLLTTCKDKKMRIINPRT-------G-------------AIEEEAVCHEGSKATRAIYL--KSGLI  315 (490)
Q Consensus       260 ~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~-------~-------------~~~~~~~~~~~~~~~~~~~s--~~~~~  315 (490)
                      .|+.|....  ....|+.+..||.|.+|.+.+       .             ++.  +...-+.....++++  ...++
T Consensus       102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~--f~~~v~~SaWGLdIh~~~~~rl  179 (717)
T PF08728_consen  102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPF--FHLRVGASAWGLDIHDYKKSRL  179 (717)
T ss_pred             eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCC--eEeecCCceeEEEEEecCcceE
Confidence            355555544  446888999999999997631       0             011  111122237888888  77888


Q ss_pred             EEEEeCCCceeEEEEecCCCCC-CCeEEEeccCCCceeeeeecCCC-----CeEEEEecCCCeEEEEEe
Q psy17682        316 FTTGFSKMSERQYSLRAPDHLD-EPIVMVELDTSNGVMFPLYDPDT-----NLVYLCGKGDSVIRYFEI  378 (490)
Q Consensus       316 l~~~~~~~~~~~i~iwd~~~~~-~~~~~~~~~~~~~i~~~~~s~~~-----~~l~~~g~~dg~i~iwd~  378 (490)
                      +|+++   ....|.+|-..... +........+...|-+++|-++.     ...+++++-.|.+.+|++
T Consensus       180 IAVSs---Ns~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  180 IAVSS---NSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EEEec---CCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            88887   45666666544321 11111133455668888886643     223377889999999888

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=92.22  E-value=6.8  Score=33.60  Aligned_cols=107  Identities=14%  Similarity=0.153  Sum_probs=63.2

Q ss_pred             CEEEEEeCCCeEEEEeCCCC--ceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCcee---EEEE---ecCC-CCCCCeE
Q psy17682        271 SKLLTTCKDKKMRIINPRTG--AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSER---QYSL---RAPD-HLDEPIV  341 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~---~i~i---wd~~-~~~~~~~  341 (490)
                      ..|+.+...+.|.+|++...  +...++..-  ..+..+.++..|.++++--.+....   .+++   |... ....+..
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv--~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~  106 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV--GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVR  106 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEcch--hheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEE
Confidence            34444466788999999843  344444432  3488999999999999875444334   5555   3333 2222222


Q ss_pred             ---------------------EEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        342 ---------------------MVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       342 ---------------------~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                                           ..+.+-.....+++..|-...| +.| .++.+.+|.+...
T Consensus       107 vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~L-lVg-~~~~l~lf~l~~~  165 (215)
T PF14761_consen  107 VRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNL-LVG-CGNKLVLFTLKYQ  165 (215)
T ss_pred             EEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCE-EEE-cCCEEEEEEEEEE
Confidence                                 1222333456667777754444 234 3678999988754

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=91.98  E-value=14  Score=38.22  Aligned_cols=126  Identities=12%  Similarity=0.039  Sum_probs=76.6

Q ss_pred             ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCC---------CCc--ccC-CCCcceeecccCCeeEEEEC--CC
Q psy17682        111 STANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTA---------PNT--GRI-NADHALVGGHKGPVLDIAWS--PH  176 (490)
Q Consensus       111 ~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~---------~~~--~~~-~~~~~~~~~h~~~V~~~~~~--p~  176 (490)
                      ..|+.+.+..-+   -..++..+..+|.+.+|..+...         ...  .+. .++... ..-...+++++++  ..
T Consensus       101 HtIN~i~v~~lg---~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~-~~v~~SaWGLdIh~~~~  176 (717)
T PF08728_consen  101 HTINFIKVGDLG---GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFH-LRVGASAWGLDIHDYKK  176 (717)
T ss_pred             ceeeEEEecccC---CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeE-eecCCceeEEEEEecCc
Confidence            356666543322   23578888999999999663200         000  000 011111 2234589999998  65


Q ss_pred             CCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCC--CC---EEEEEeCCCcEEEEEC
Q psy17682        177 DDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTA--QN---VLLTAGSDNNVAIWNV  245 (490)
Q Consensus       177 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~--~~---~l~s~~~dg~v~iwd~  245 (490)
                      . +++|+++....|.||-......... ..+   -..|...|-+++|.++.  +.   .+++++-.|.+.+|++
T Consensus       177 ~-rlIAVSsNs~~VTVFaf~l~~~r~~-~~~---s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  177 S-RLIAVSSNSQEVTVFAFALVDERFY-HVP---SHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             c-eEEEEecCCceEEEEEEeccccccc-ccc---ccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            4 8899999999999887654311111 111   11266778999998764  22   6778888999998887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>KOG2377|consensus

Probab=91.96  E-value=4.3  Score=38.66  Aligned_cols=75  Identities=8%  Similarity=0.154  Sum_probs=51.5

Q ss_pred             cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC-CceeeEEEeeCceeEEeecceeEEEEe
Q psy17682        346 DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP-DPQRGIGMMPKRGCDVNSCEIGRFFRL  421 (490)
Q Consensus       346 ~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~~~~~~~~~~  421 (490)
                      ...+.|.++.||+|.+.| |.--.|+.|.+++....++........+.+ ..|.++.|+....+.+..+.-+.+|..
T Consensus        64 ~d~G~I~SIkFSlDnkil-AVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~e~A~i~~~G~e~y~v  139 (657)
T KOG2377|consen   64 DDKGEIKSIKFSLDNKIL-AVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTEIAFITDQGIEFYQV  139 (657)
T ss_pred             cCCCceeEEEeccCcceE-EEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecCeeEEEEecCCeEEEEE
Confidence            445689999999999998 677889999999986555433333333333 458999999876665544443344443

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=91.62  E-value=8.8  Score=40.11  Aligned_cols=28  Identities=21%  Similarity=0.026  Sum_probs=21.0

Q ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy17682        259 DIVYSASWNWDGSKLLTTCKDKKMRIINP  287 (490)
Q Consensus       259 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~  287 (490)
                      -.|..+..+|+|.+++..+..| |.|..+
T Consensus        85 f~v~~i~~n~~g~~lal~G~~~-v~V~~L  112 (717)
T PF10168_consen   85 FEVHQISLNPTGSLLALVGPRG-VVVLEL  112 (717)
T ss_pred             eeEEEEEECCCCCEEEEEcCCc-EEEEEe
Confidence            3588899999999999888755 444444

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>KOG2280|consensus

Probab=91.45  E-value=5.4  Score=40.57  Aligned_cols=175  Identities=12%  Similarity=0.164  Sum_probs=87.1

Q ss_pred             CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee-e-eecCCCceeEEEEeCCCcE
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEE-A-VCHEGSKATRAIYLKSGLI  315 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~-~~~~~~~~~~~~~s~~~~~  315 (490)
                      -.|+||+. +|..+.++....+.+-.+.|+.+ ..|++...+|++++|++-....... . .......|..+.+..+|-.
T Consensus        64 ~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~-eeLI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~GVa  141 (829)
T KOG2280|consen   64 PYIRIFNI-SGQLLGRILWKHGELIGMGWSDD-EELICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNGVA  141 (829)
T ss_pred             eeEEEEec-cccchHHHHhcCCCeeeecccCC-ceEEEEeccceEEEeecchhhhcccccccccccCceeEEEEecCceE
Confidence            45888887 57766666544457889999965 4566778999999999863322111 1 0111122555555567776


Q ss_pred             EEEEeCCCceeEEEEecCCCCCCCeEEEeccC-CCceeee-eecCCCC--eEEEEecCCCeEEEEEecCCCCeeEEeeee
Q psy17682        316 FTTGFSKMSERQYSLRAPDHLDEPIVMVELDT-SNGVMFP-LYDPDTN--LVYLCGKGDSVIRYFEITAEPPFVHYINTF  391 (490)
Q Consensus       316 l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~-~~~i~~~-~~s~~~~--~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~  391 (490)
                      +.+.+    +..+.+-+..... +......+. ...-.+- ++.|..+  .++...-..+ ..++...+...   ....+
T Consensus       142 vlt~~----g~v~~i~~~~~~~-~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~~~~~---q~~~~  212 (829)
T KOG2280|consen  142 VLTVS----GQVILINGVEEPK-LRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVEESRV---QLHAL  212 (829)
T ss_pred             EEecC----CcEEEEcCCCcch-hhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccceecccc---ccccc
Confidence            66663    3444444443311 111111000 0000111 1222211  1111110111 12233333221   11222


Q ss_pred             eC-CCceeeEEEeeCceeEEeecceeEEEEecC
Q psy17682        392 QT-PDPQRGIGMMPKRGCDVNSCEIGRFFRLNN  423 (490)
Q Consensus       392 ~~-~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~  423 (490)
                      .. ...+..+..||++++++--.+.+++|....
T Consensus       213 ~~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~  245 (829)
T KOG2280|consen  213 SWPNSSVVKISVSPNRRFLALYTETGKIWVVSI  245 (829)
T ss_pred             CCCCceEEEEEEcCCcceEEEEecCCcEEEEec
Confidence            22 256788899999988887777777776543

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=91.27  E-value=10  Score=33.76  Aligned_cols=192  Identities=17%  Similarity=0.121  Sum_probs=112.6

Q ss_pred             CEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeee
Q psy17682        217 RVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEA  296 (490)
Q Consensus       217 ~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  296 (490)
                      .-..++-.|+|. .-+++...+.|--.|..+|+....--+....-..+..-|||..-++-+.. -|.-.|-++.+.. ++
T Consensus        63 ap~dvapapdG~-VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~evt-~f  139 (353)
T COG4257          63 APFDVAPAPDGA-VWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEVT-RF  139 (353)
T ss_pred             CccccccCCCCc-eEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcc-eeEEecCcccceE-Ee
Confidence            346678888885 77888888888888988888655444555566778889998877664443 5666666555432 22


Q ss_pred             e---ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeE
Q psy17682        297 V---CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVI  373 (490)
Q Consensus       297 ~---~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i  373 (490)
                      .   .|.........|.+.|.+-.++.    .|..--.|..  .....+.......+-..++..|||...| +.-.+..|
T Consensus       140 ~lp~~~a~~nlet~vfD~~G~lWFt~q----~G~yGrLdPa--~~~i~vfpaPqG~gpyGi~atpdGsvwy-aslagnai  212 (353)
T COG4257         140 PLPLEHADANLETAVFDPWGNLWFTGQ----IGAYGRLDPA--RNVISVFPAPQGGGPYGICATPDGSVWY-ASLAGNAI  212 (353)
T ss_pred             ecccccCCCcccceeeCCCccEEEeec----cccceecCcc--cCceeeeccCCCCCCcceEECCCCcEEE-Eeccccce
Confidence            2   23333477888999999888875    3322222222  2222222223334567788899998874 44456666


Q ss_pred             EEEEecCCCCeeEEeeeeeC-CCceeeEEEeeCceeEEeecceeEEEE
Q psy17682        374 RYFEITAEPPFVHYINTFQT-PDPQRGIGMMPKRGCDVNSCEIGRFFR  420 (490)
Q Consensus       374 ~iwd~~~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~~~~~~~  420 (490)
                      -.-|..++..  +.+..-.. ....+.+--+|.|..-++.-...+++.
T Consensus       213 aridp~~~~a--ev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~r  258 (353)
T COG4257         213 ARIDPFAGHA--EVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHR  258 (353)
T ss_pred             EEcccccCCc--ceecCCCcccccccccccCccCcEEEeccCCceeeE
Confidence            6666665531  12211111 123344555566665555444334433

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=91.25  E-value=13  Score=34.83  Aligned_cols=108  Identities=14%  Similarity=0.059  Sum_probs=52.4

Q ss_pred             CEEEEEeCC-----CcEEEEECCCCee---EEEEecCCCcE--EEEEEcCCCCEEEEEeC-----CCeEEEEeCCCCcee
Q psy17682        229 NVLLTAGSD-----NNVAIWNVGTGEI---MIQIECHPDIV--YSASWNWDGSKLLTTCK-----DKKMRIINPRTGAIE  293 (490)
Q Consensus       229 ~~l~s~~~d-----g~v~iwd~~~~~~---~~~~~~~~~~v--~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~  293 (490)
                      .+++.|+.+     ..+..+|+.+.+.   ...+..-..+.  .+++.. ++++++.|+.     ...+..||+.+.+-.
T Consensus        74 ~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~-~~~iYv~GG~~~~~~~~~v~~yd~~~~~W~  152 (323)
T TIGR03548        74 GIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYK-DGTLYVGGGNRNGKPSNKSYLFNLETQEWF  152 (323)
T ss_pred             EEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEE-CCEEEEEeCcCCCccCceEEEEcCCCCCee
Confidence            367777754     2466677765542   12222111111  122222 4666777764     246888998876532


Q ss_pred             eeeeecCCCceeEEEEeCCCcEEEEEeCCCc-eeEEEEecCCCCC
Q psy17682        294 EEAVCHEGSKATRAIYLKSGLIFTTGFSKMS-ERQYSLRAPDHLD  337 (490)
Q Consensus       294 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~-~~~i~iwd~~~~~  337 (490)
                      ..-...........+...++++++.|+.++. ...+.+||+.+..
T Consensus       153 ~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~  197 (323)
T TIGR03548       153 ELPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQ  197 (323)
T ss_pred             ECCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCe
Confidence            2111111111222333456777777763221 1235678877643

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=91.08  E-value=6  Score=38.16  Aligned_cols=90  Identities=14%  Similarity=0.150  Sum_probs=58.7

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC-------------
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT-------------  226 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-------------  226 (490)
                      .+......+.+++.+|.+ .+.|+...=|.|.++|+.++..++.++..      .+..+.-+.-...             
T Consensus       302 ~l~D~~R~~~~i~~sP~~-~laA~tDslGRV~LiD~~~~~vvrmWKGY------RdAqc~wi~~~~~~~~~~~~~~~~~~  374 (415)
T PF14655_consen  302 GLPDSKREGESICLSPSG-RLAAVTDSLGRVLLIDVARGIVVRMWKGY------RDAQCGWIEVPEEGDRDRSNSNSPKS  374 (415)
T ss_pred             eeccCCceEEEEEECCCC-CEEEEEcCCCcEEEEECCCChhhhhhccC------ccceEEEEEeecccccccccccccCC
Confidence            345566779999999987 78888877899999999988877665420      0000000000000             


Q ss_pred             ----CCCEEEEEeCCCcEEEEECCCCeeEEEEec
Q psy17682        227 ----AQNVLLTAGSDNNVAIWNVGTGEIMIQIEC  256 (490)
Q Consensus       227 ----~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~  256 (490)
                          ...+++-+..-|.|.||.+++|..+..+..
T Consensus       375 ~~~~~l~LvIyaprRg~lEvW~~~~g~Rv~a~~v  408 (415)
T PF14655_consen  375 SSRFALFLVIYAPRRGILEVWSMRQGPRVAAFNV  408 (415)
T ss_pred             CCcceEEEEEEeccCCeEEEEecCCCCEEEEEEe
Confidence                011344456678999999999888877763

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=90.88  E-value=14  Score=34.64  Aligned_cols=163  Identities=11%  Similarity=0.076  Sum_probs=91.0

Q ss_pred             CCcEEEEEEcCCCCEEEEEeCCCe------EEEEeCCCC----ceee-----eeeecCCC-------ceeEEEEeCCCcE
Q psy17682        258 PDIVYSASWNWDGSKLLTTCKDKK------MRIINPRTG----AIEE-----EAVCHEGS-------KATRAIYLKSGLI  315 (490)
Q Consensus       258 ~~~v~~~~~~~~~~~l~~~~~dg~------i~iwd~~~~----~~~~-----~~~~~~~~-------~~~~~~~s~~~~~  315 (490)
                      -+.+..+.+.+++..+++.+.+|.      ++.+++...    ..+.     .+....+.       -.-.+++.++|.+
T Consensus        19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~   98 (326)
T PF13449_consen   19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSF   98 (326)
T ss_pred             cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCE
Confidence            455778888876666777777777      666665531    1111     11111111       1336777777877


Q ss_pred             EEEEeCCCce------eEEEEecCCCCCCCeEE-------------EeccCCCceeeeeecCCCCeEEEEe----cCCC-
Q psy17682        316 FTTGFSKMSE------RQYSLRAPDHLDEPIVM-------------VELDTSNGVMFPLYDPDTNLVYLCG----KGDS-  371 (490)
Q Consensus       316 l~~~~~~~~~------~~i~iwd~~~~~~~~~~-------------~~~~~~~~i~~~~~s~~~~~l~~~g----~~dg-  371 (490)
                      +++.-   ..      ..|..++.. +.....+             .......+.-.++++|+|+.|+++.    ..|+ 
T Consensus        99 ~is~E---~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~  174 (326)
T PF13449_consen   99 WISSE---GGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGP  174 (326)
T ss_pred             EEEeC---CccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCc
Confidence            77653   34      678788866 2221111             1223445688999999999664442    1122 


Q ss_pred             -e-------EEEEEec--C-CCCeeEEeeeee------CCCceeeEEEeeCceeEEeec-------ceeEEEEecCC
Q psy17682        372 -V-------IRYFEIT--A-EPPFVHYINTFQ------TPDPQRGIGMMPKRGCDVNSC-------EIGRFFRLNNS  424 (490)
Q Consensus       372 -~-------i~iwd~~--~-~~~~~~~~~~~~------~~~~i~~~~~sp~~~~l~~~~-------~~~~~~~~~~~  424 (490)
                       .       ++++...  + +++..+......      ....+..+.+.+++.+++-.-       ...++|.+.-.
T Consensus       175 ~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ri~~v~l~  251 (326)
T PF13449_consen  175 RANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNYKRIYRVDLS  251 (326)
T ss_pred             ccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccceEEEEEEEcc
Confidence             1       5555554  3 222233333222      345788999999998877542       25566666543

>KOG1916|consensus

Probab=90.48  E-value=0.69  Score=47.51  Aligned_cols=126  Identities=20%  Similarity=0.085  Sum_probs=74.0

Q ss_pred             ecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCC--CCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         39 DLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLK--DGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        39 ~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      .++|-.+.|-.+.|-...-..+.  -.-|..-||++.  .|++.+              ++...+....+.    .+.-+
T Consensus       127 l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~--------------~l~v~~~~p~gs----~~~~V  186 (1283)
T KOG1916|consen  127 LAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQP--------------QLEVTPITPYGS----DPQLV  186 (1283)
T ss_pred             HHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhcccccc--------------ceEEeecCcCCC----Cccee
Confidence            36677788888888654322222  223677899876  444333              222222222221    12334


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEE-----------ECCCCCCEEEEEe
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIA-----------WSPHDDNVIASGS  185 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~-----------~~p~~~~~l~s~~  185 (490)
                      .|.|-...+  ..+..+..++.+++...+    .     .....+.+|...+..++           .+||| ..++.++
T Consensus       187 ~wcp~~~~~--~~ic~~~~~~~i~lL~~~----r-----a~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDG-tv~a~a~  254 (1283)
T KOG1916|consen  187 SWCPIAVNK--VYICYGLKGGEIRLLNIN----R-----ALRSLFRSHSQRVTDMAFFAEGVLKLASLSPDG-TVFAWAI  254 (1283)
T ss_pred             eeccccccc--ceeeeccCCCceeEeeec----h-----HHHHHHHhcCCCcccHHHHhhchhhheeeCCCC-cEEEEee
Confidence            444433222  456667778888887764    1     12245567887777765           47888 8899999


Q ss_pred             CCCcEEEEECC
Q psy17682        186 EDCVVKVWQIP  196 (490)
Q Consensus       186 ~dg~i~iwd~~  196 (490)
                      .||.++.|.+.
T Consensus       255 ~dG~v~f~Qiy  265 (1283)
T KOG1916|consen  255 SDGSVGFYQIY  265 (1283)
T ss_pred             cCCccceeeee
Confidence            99998888754

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=89.97  E-value=1.9  Score=37.63  Aligned_cols=65  Identities=17%  Similarity=0.151  Sum_probs=43.8

Q ss_pred             cCCCCEEEEEeCCCeEEEEeCCCCceeeee------ee-------cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecC
Q psy17682        267 NWDGSKLLTTCKDKKMRIINPRTGAIEEEA------VC-------HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAP  333 (490)
Q Consensus       267 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~------~~-------~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~  333 (490)
                      ..++.++++.+.+|.+++||+.+++.+..-      ..       .....+..+.++.+|.-+++-+    ++..+.|+.
T Consensus        19 ~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls----ng~~y~y~~   94 (219)
T PF07569_consen   19 ECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS----NGDSYSYSP   94 (219)
T ss_pred             EeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe----CCCEEEecc
Confidence            346888999999999999999988754322      01       1223466677777777666654    456677765


Q ss_pred             CC
Q psy17682        334 DH  335 (490)
Q Consensus       334 ~~  335 (490)
                      +-
T Consensus        95 ~L   96 (219)
T PF07569_consen   95 DL   96 (219)
T ss_pred             cc
Confidence            53

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=89.88  E-value=6.6  Score=38.09  Aligned_cols=140  Identities=12%  Similarity=0.097  Sum_probs=80.1

Q ss_pred             EEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCC------EEEEEeCCCcEEEEECCC-CeeEE
Q psy17682        180 VIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQN------VLLTAGSDNNVAIWNVGT-GEIMI  252 (490)
Q Consensus       180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~------~l~s~~~dg~v~iwd~~~-~~~~~  252 (490)
                      ++..|+....+.--|++.|+.+..+..       |...  -+.|.|..+.      .-+.|-.+..|.-.|.+- |..+.
T Consensus       482 i~~dg~~~~kLykmDIErGkvveeW~~-------~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~  552 (776)
T COG5167         482 IYLDGGERDKLYKMDIERGKVVEEWDL-------KDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIK  552 (776)
T ss_pred             EEecCCCcccceeeecccceeeeEeec-------CCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCcee
Confidence            334456666777778888887766542       4443  5667765310      123444555565556653 32222


Q ss_pred             EEecCCCcEEEEEEcC----CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEE
Q psy17682        253 QIECHPDIVYSASWNW----DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQY  328 (490)
Q Consensus       253 ~~~~~~~~v~~~~~~~----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i  328 (490)
                      ..+ ....++.-.|+.    .+-++++++..|-|++||--.......+.+. +..|..+..+.+|.++++.+    ...+
T Consensus       553 v~e-sKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~l-G~aIk~idvta~Gk~ilaTC----k~yl  626 (776)
T COG5167         553 VVE-SKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGL-GDAIKHIDVTANGKHILATC----KNYL  626 (776)
T ss_pred             eee-ehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcCccc-ccceeeeEeecCCcEEEEee----cceE
Confidence            211 122222223332    3458999999999999995433333333333 33488888999998777665    5566


Q ss_pred             EEecCC
Q psy17682        329 SLRAPD  334 (490)
Q Consensus       329 ~iwd~~  334 (490)
                      -+-|++
T Consensus       627 lL~d~~  632 (776)
T COG5167         627 LLTDVP  632 (776)
T ss_pred             EEEecc
Confidence            666654

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=89.84  E-value=30  Score=36.68  Aligned_cols=159  Identities=11%  Similarity=0.083  Sum_probs=88.3

Q ss_pred             CEEEEEeCCCcEEEEECCCCCccccccccee-eec----ccccCEEEEEEee--CCCCEEEEEeC----------CCcEE
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVV-DLL----YHQRRVGLVLWHP--TAQNVLLTAGS----------DNNVA  241 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~----~~~~~v~~~~~~p--~~~~~l~s~~~----------dg~v~  241 (490)
                      ..++.++.|+.+.-.|.++|+....+...-. .+.    .....-..+.-.|  .+ ..+++|+.          +|.|+
T Consensus       261 ~rV~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~-g~VIvG~~v~d~~~~~~~~G~I~  339 (764)
T TIGR03074       261 RRIILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAG-TTVVIGGRVADNYSTDEPSGVIR  339 (764)
T ss_pred             CEEEEecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEEC-CEEEEEecccccccccCCCcEEE
Confidence            4677788889888889888887655432100 000    0000000011111  12 25666643          68899


Q ss_pred             EEECCCCeeEEEEecC---------CCc--------E-EEEEEcCCCCEEEEEe------------------CCCeEEEE
Q psy17682        242 IWNVGTGEIMIQIECH---------PDI--------V-YSASWNWDGSKLLTTC------------------KDKKMRII  285 (490)
Q Consensus       242 iwd~~~~~~~~~~~~~---------~~~--------v-~~~~~~~~~~~l~~~~------------------~dg~i~iw  285 (490)
                      -+|.++|+.+..+...         .+.        + ..+++.++...+..+.                  ..+.|.-.
T Consensus       340 A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvAL  419 (764)
T TIGR03074       340 AFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVAL  419 (764)
T ss_pred             EEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEE
Confidence            9999999988877521         011        1 2334455444433322                  13567778


Q ss_pred             eCCCCceeeeeee-cCC-------CceeEEEEeC-CCc---EEEEEeCCCceeEEEEecCCCCCCCeE
Q psy17682        286 NPRTGAIEEEAVC-HEG-------SKATRAIYLK-SGL---IFTTGFSKMSERQYSLRAPDHLDEPIV  341 (490)
Q Consensus       286 d~~~~~~~~~~~~-~~~-------~~~~~~~~s~-~~~---~l~~~~~~~~~~~i~iwd~~~~~~~~~  341 (490)
                      |.++++....++. |..       ....-+.+.. +|+   .++.+.   .+|.+.+.|.++++....
T Consensus       420 D~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~---K~G~~~vlDr~tG~~l~~  484 (764)
T TIGR03074       420 DATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPT---KQGQIYVLDRRTGEPIVP  484 (764)
T ss_pred             eCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEEC---CCCEEEEEECCCCCEEee
Confidence            8889988877763 221       1122222333 553   566666   689999999998875443

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=89.52  E-value=8.8  Score=30.16  Aligned_cols=121  Identities=11%  Similarity=0.038  Sum_probs=71.4

Q ss_pred             EEECCCCCCEEEEEeCCCcEEEEECCCCCcccc-cccceeeecccccCEEEEEEeeC----CCCEEEEEeCCCcEEEEEC
Q psy17682        171 IAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT-LTEPVVDLLYHQRRVGLVLWHPT----AQNVLLTAGSDNNVAIWNV  245 (490)
Q Consensus       171 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~p~----~~~~l~s~~~dg~v~iwd~  245 (490)
                      -+|.... ..|+.++.-|+|.|++......... ...++. +..-...|++++-.+-    +...|+.|+. ..+..||+
T Consensus         4 GkfDG~~-pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~-~LNin~~italaaG~l~~~~~~D~LliGt~-t~llaYDV   80 (136)
T PF14781_consen    4 GKFDGVH-PCLACATTGGKVFIHNPHERGQRTGRQDSDIS-FLNINQEITALAAGRLKPDDGRDCLLIGTQ-TSLLAYDV   80 (136)
T ss_pred             EEeCCCc-eeEEEEecCCEEEEECCCccccccccccCcee-EEECCCceEEEEEEecCCCCCcCEEEEecc-ceEEEEEc
Confidence            3566555 5788888889999998764432111 112222 2225566777765542    2336777765 57899999


Q ss_pred             CCCeeEEEEecCCCcEEEEEEcC---CCCEEEEEeCCCeEEEEeCCCCceeee
Q psy17682        246 GTGEIMIQIECHPDIVYSASWNW---DGSKLLTTCKDKKMRIINPRTGAIEEE  295 (490)
Q Consensus       246 ~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~  295 (490)
                      .....+..- .-...|.++.+-.   ...-++..+.+..|.-||....+...+
T Consensus        81 ~~N~d~Fyk-e~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWt  132 (136)
T PF14781_consen   81 ENNSDLFYK-EVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWT  132 (136)
T ss_pred             ccCchhhhh-hCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEE
Confidence            877654432 2446677777633   123344444467788888765555444

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=89.27  E-value=34  Score=36.54  Aligned_cols=160  Identities=9%  Similarity=0.067  Sum_probs=94.2

Q ss_pred             cccCEEEEEEe---eC---CCCEEEEEeCCCcEEEEECC------C---------CeeEEEEe---cCCCcEEEEEEcC-
Q psy17682        214 HQRRVGLVLWH---PT---AQNVLLTAGSDNNVAIWNVG------T---------GEIMIQIE---CHPDIVYSASWNW-  268 (490)
Q Consensus       214 ~~~~v~~~~~~---p~---~~~~l~s~~~dg~v~iwd~~------~---------~~~~~~~~---~~~~~v~~~~~~~-  268 (490)
                      ...+|..|+|.   ..   ...+|++- ....+.|+...      .         ..++..+.   -...+...++|+| 
T Consensus        78 ~~~PI~qI~fa~~~~~~~~~~~~l~Vr-t~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~FnP~  156 (765)
T PF10214_consen   78 DGSPIKQIKFATLSESFDEKSRWLAVR-TETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAFNPW  156 (765)
T ss_pred             CCCCeeEEEecccccccCCcCcEEEEE-cCCEEEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEeccC
Confidence            45667777776   21   11244443 44556666611      1         12344443   1244677899999 


Q ss_pred             CCCEEEEEeCCCeEEEEeCCCCc----eeeeee-ecCC---------CceeEEEEeCCCcEEEEEeCCCceeEEEEecCC
Q psy17682        269 DGSKLLTTCKDKKMRIINPRTGA----IEEEAV-CHEG---------SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPD  334 (490)
Q Consensus       269 ~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~-~~~~---------~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~  334 (490)
                      +.+.||+....|...|||+....    ...... .+.+         .....+.|.++...|+++.    ...+.++|++
T Consensus       157 ~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~----r~~l~~~d~~  232 (765)
T PF10214_consen  157 DQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCN----RSKLMLIDFE  232 (765)
T ss_pred             ccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEc----CCceEEEECC
Confidence            55799999999999999992111    111111 1111         1144788988877776664    6678999998


Q ss_pred             CCCCCeEEEeccCCCceeeeeecCC--CCeEEEEecCCCeEEEEEecCC
Q psy17682        335 HLDEPIVMVELDTSNGVMFPLYDPD--TNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       335 ~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      +......+........|..+.-+|.  +..+ +..  ...|...++...
T Consensus       233 ~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~F-iLT--s~eiiw~~~~~~  278 (765)
T PF10214_consen  233 SNWQTEYLVTAKTWSWILDVKRSPDNPSHVF-ILT--SKEIIWLDVKSS  278 (765)
T ss_pred             CCCccchhccCCChhheeeEEecCCccceEE-EEe--cCeEEEEEccCC
Confidence            7654222333344456888888887  3333 332  366888888774

These proteins are found in fungi.

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=89.02  E-value=9.6  Score=37.28  Aligned_cols=109  Identities=14%  Similarity=0.136  Sum_probs=62.2

Q ss_pred             ceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeE-----EEeccCCCceeeeeecCCC------CeEEEEecC--
Q psy17682        303 KATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIV-----MVELDTSNGVMFPLYDPDT------NLVYLCGKG--  369 (490)
Q Consensus       303 ~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~-----~~~~~~~~~i~~~~~s~~~------~~l~~~g~~--  369 (490)
                      ....++|.|+|++|++--   ..|.|++++.........     ........+...++++|+-      ++||++-+.  
T Consensus        31 ~Pw~maflPDG~llVtER---~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~  107 (454)
T TIGR03606        31 KPWALLWGPDNQLWVTER---ATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKN  107 (454)
T ss_pred             CceEEEEcCCCeEEEEEe---cCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccC
Confidence            378999999999988763   248888887654322111     1111135678999999885      466666422  


Q ss_pred             -------CCeEEEEEecCC-CCe---eEEeeeee--CCCceeeEEEeeCceeEEeecc
Q psy17682        370 -------DSVIRYFEITAE-PPF---VHYINTFQ--TPDPQRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       370 -------dg~i~iwd~~~~-~~~---~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~  414 (490)
                             ...|.-|.+... ..+   ...+....  ..+.-..|+|.|||.+.++.++
T Consensus       108 ~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~LYVs~GD  165 (454)
T TIGR03606       108 GDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGKIYYTIGE  165 (454)
T ss_pred             CCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCcEEEEECC
Confidence                   234555555421 101   11222221  1123567889999987665433

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=89.01  E-value=1.9  Score=25.45  Aligned_cols=28  Identities=14%  Similarity=0.401  Sum_probs=21.7

Q ss_pred             CceeeeeecCCCCeEEEEecCC--CeEEEE
Q psy17682        349 NGVMFPLYDPDTNLVYLCGKGD--SVIRYF  376 (490)
Q Consensus       349 ~~i~~~~~s~~~~~l~~~g~~d--g~i~iw  376 (490)
                      .......|||||+.|+.++..+  |.-.||
T Consensus         9 ~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    9 GDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             SSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             ccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            4567889999999998888777  766666

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=88.84  E-value=34  Score=35.96  Aligned_cols=74  Identities=18%  Similarity=0.258  Sum_probs=50.7

Q ss_pred             cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC----------Ce--eEE-EE--------ecCCCcEEEEEEcCC---CC
Q psy17682        216 RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT----------GE--IMI-QI--------ECHPDIVYSASWNWD---GS  271 (490)
Q Consensus       216 ~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~----------~~--~~~-~~--------~~~~~~v~~~~~~~~---~~  271 (490)
                      -.|..+..+|+|. +++..|..| |.|-.+..          ++  ..+ ++        ..+...|..+.|+|.   +.
T Consensus        85 f~v~~i~~n~~g~-~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~  162 (717)
T PF10168_consen   85 FEVHQISLNPTGS-LLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDS  162 (717)
T ss_pred             eeEEEEEECCCCC-EEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCC
Confidence            3588999999996 677666655 44433321          11  111 11        124457899999995   57


Q ss_pred             EEEEEeCCCeEEEEeCCCCc
Q psy17682        272 KLLTTCKDKKMRIINPRTGA  291 (490)
Q Consensus       272 ~l~~~~~dg~i~iwd~~~~~  291 (490)
                      +|++-+.|+++|+||+....
T Consensus       163 ~l~vLtsdn~lR~y~~~~~~  182 (717)
T PF10168_consen  163 HLVVLTSDNTLRLYDISDPQ  182 (717)
T ss_pred             eEEEEecCCEEEEEecCCCC
Confidence            99999999999999997643

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=88.70  E-value=20  Score=33.11  Aligned_cols=226  Identities=9%  Similarity=0.035  Sum_probs=102.1

Q ss_pred             eeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC
Q psy17682        168 VLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT  247 (490)
Q Consensus       168 V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~  247 (490)
                      ..++.|.. + ..+++| ..+ +.+...+.++.-..+..+    ..-......+....++  ....++..|.|.. -.+.
T Consensus        64 l~~I~f~~-~-~g~ivG-~~g-~ll~T~DgG~tW~~v~l~----~~lpgs~~~i~~l~~~--~~~l~~~~G~iy~-T~Dg  132 (302)
T PF14870_consen   64 LNSISFDG-N-EGWIVG-EPG-LLLHTTDGGKTWERVPLS----SKLPGSPFGITALGDG--SAELAGDRGAIYR-TTDG  132 (302)
T ss_dssp             EEEEEEET-T-EEEEEE-ETT-EEEEESSTTSS-EE--------TT-SS-EEEEEEEETT--EEEEEETT--EEE-ESST
T ss_pred             EEEEEecC-C-ceEEEc-CCc-eEEEecCCCCCcEEeecC----CCCCCCeeEEEEcCCC--cEEEEcCCCcEEE-eCCC
Confidence            56677764 2 445544 444 444444545443332210    0012223344444444  2333345555432 2233


Q ss_pred             CeeEEE-EecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCcee
Q psy17682        248 GEIMIQ-IECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSER  326 (490)
Q Consensus       248 ~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~  326 (490)
                      |+.-.. ...-.+.+..+.-+++|+++++++......-||-....-.. ........+..+.|.|++.+.+.+    +.+
T Consensus       133 G~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~-~~r~~~~riq~~gf~~~~~lw~~~----~Gg  207 (302)
T PF14870_consen  133 GKTWQAVVSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQP-HNRNSSRRIQSMGFSPDGNLWMLA----RGG  207 (302)
T ss_dssp             TSSEEEEE-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EE-EE--SSS-EEEEEE-TTS-EEEEE----TTT
T ss_pred             CCCeeEcccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceE-EccCccceehhceecCCCCEEEEe----CCc
Confidence            333222 23445678888899999999888776666778765332211 222233469999999998887766    477


Q ss_pred             EEEEecCCCCCCCeEE--Eec-cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEe
Q psy17682        327 QYSLRAPDHLDEPIVM--VEL-DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMM  403 (490)
Q Consensus       327 ~i~iwd~~~~~~~~~~--~~~-~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~s  403 (490)
                      .|++=+..........  ... ...-++..++|.+++... ++|+ .|. .+.....++.-.+......-+...+.+.|.
T Consensus       208 ~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~w-a~gg-~G~-l~~S~DgGktW~~~~~~~~~~~n~~~i~f~  284 (302)
T PF14870_consen  208 QIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIW-AVGG-SGT-LLVSTDGGKTWQKDRVGENVPSNLYRIVFV  284 (302)
T ss_dssp             EEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EE-EEES-TT--EEEESSTTSS-EE-GGGTTSSS---EEEEE
T ss_pred             EEEEccCCCCccccccccCCcccCceeeEEEEecCCCCEE-EEeC-Ccc-EEEeCCCCccceECccccCCCCceEEEEEc
Confidence            7777662111100000  111 122347899999887666 5554 443 345566666433332222334567888887


Q ss_pred             eCceeEEee
Q psy17682        404 PKRGCDVNS  412 (490)
Q Consensus       404 p~~~~l~~~  412 (490)
                      ++.+-.+.+
T Consensus       285 ~~~~gf~lG  293 (302)
T PF14870_consen  285 NPDKGFVLG  293 (302)
T ss_dssp             ETTEEEEE-
T ss_pred             CCCceEEEC
Confidence            765544544

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=88.67  E-value=10  Score=29.81  Aligned_cols=109  Identities=12%  Similarity=0.071  Sum_probs=65.2

Q ss_pred             EEEcCCCCEEEEEeCCCeEEEEeCCCCc--------eeeeeeecCCCceeEEEEeC-----CCcEEEEEeCCCceeEEEE
Q psy17682        264 ASWNWDGSKLLTTCKDKKMRIINPRTGA--------IEEEAVCHEGSKATRAIYLK-----SGLIFTTGFSKMSERQYSL  330 (490)
Q Consensus       264 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~--------~~~~~~~~~~~~~~~~~~s~-----~~~~l~~~~~~~~~~~i~i  330 (490)
                      -.|......|++++..|+|.|++.....        .+..+....  .+++++-.+     +...|+.|+    ...+..
T Consensus         4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~--~italaaG~l~~~~~~D~LliGt----~t~lla   77 (136)
T PF14781_consen    4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQ--EITALAAGRLKPDDGRDCLLIGT----QTSLLA   77 (136)
T ss_pred             EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCC--ceEEEEEEecCCCCCcCEEEEec----cceEEE
Confidence            3455555678888888999999876432        333343222  366665433     356788886    778999


Q ss_pred             ecCCCCCCCeEEEeccCCCceeeeee---cCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        331 RAPDHLDEPIVMVELDTSNGVMFPLY---DPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       331 wd~~~~~~~~~~~~~~~~~~i~~~~~---s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      ||+........   ..-..++.++.+   ......|+++| .+..|.=||....+
T Consensus        78 YDV~~N~d~Fy---ke~~DGvn~i~~g~~~~~~~~l~ivG-Gncsi~Gfd~~G~e  128 (136)
T PF14781_consen   78 YDVENNSDLFY---KEVPDGVNAIVIGKLGDIPSPLVIVG-GNCSIQGFDYEGNE  128 (136)
T ss_pred             EEcccCchhhh---hhCccceeEEEEEecCCCCCcEEEEC-ceEEEEEeCCCCcE
Confidence            99987653222   223356666655   22223343444 46677777766554

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=88.55  E-value=25  Score=34.11  Aligned_cols=155  Identities=11%  Similarity=0.046  Sum_probs=88.9

Q ss_pred             EEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEEC---CC-CCCEEEEEeCCCcEEEEECCCCCcc-
Q psy17682        127 KEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWS---PH-DDNVIASGSEDCVVKVWQIPDGGIS-  201 (490)
Q Consensus       127 ~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~---p~-~~~~l~s~~~dg~i~iwd~~~~~~~-  201 (490)
                      ...|..++..|.++||...    ..+........-..-+.+|..+..-   +. ....||. -.-..+.+|.+...... 
T Consensus        37 ~d~IivGS~~G~LrIy~P~----~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~  111 (418)
T PF14727_consen   37 SDKIIVGSYSGILRIYDPS----GNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTV  111 (418)
T ss_pred             ccEEEEeccccEEEEEccC----CCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCc
Confidence            3578889999999999885    2221111122223346788888753   22 2234444 44568888887322111 


Q ss_pred             -cccccceeeecccc--cCEEEEEEeeC----CCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEE
Q psy17682        202 -RTLTEPVVDLLYHQ--RRVGLVLWHPT----AQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLL  274 (490)
Q Consensus       202 -~~~~~~~~~~~~~~--~~v~~~~~~p~----~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  274 (490)
                       ..-.........|.  .....++.-|-    +..++.+-+.||.+.+|+-+.-...+.+.. .--.-.+.+.+.-..|+
T Consensus       112 ~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfv  190 (418)
T PF14727_consen  112 EHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFV  190 (418)
T ss_pred             ccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEE
Confidence             00000011122232  22344444443    235788899999999999765443333332 22234577888788899


Q ss_pred             EEeCCCeEEEEeC
Q psy17682        275 TTCKDKKMRIINP  287 (490)
Q Consensus       275 ~~~~dg~i~iwd~  287 (490)
                      +++.+..+..|..
T Consensus       191 t~sss~~l~~Yky  203 (418)
T PF14727_consen  191 TASSSWTLECYKY  203 (418)
T ss_pred             EecCceeEEEecH
Confidence            9998888888865

>KOG4460|consensus

Probab=88.09  E-value=13  Score=36.21  Aligned_cols=27  Identities=19%  Similarity=0.031  Sum_probs=20.9

Q ss_pred             cEEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy17682        260 IVYSASWNWDGSKLLTTCKDKKMRIIN  286 (490)
Q Consensus       260 ~v~~~~~~~~~~~l~~~~~dg~i~iwd  286 (490)
                      .|..+..++.|..++..+.+|.+.++=
T Consensus       105 eV~~vl~s~~GS~VaL~G~~Gi~vMeL  131 (741)
T KOG4460|consen  105 EVYQVLLSPTGSHVALIGIKGLMVMEL  131 (741)
T ss_pred             EEEEEEecCCCceEEEecCCeeEEEEc
Confidence            467788899999998888888655543

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=88.08  E-value=20  Score=32.41  Aligned_cols=154  Identities=9%  Similarity=0.072  Sum_probs=96.8

Q ss_pred             ccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy17682        215 QRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE--CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI  292 (490)
Q Consensus       215 ~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  292 (490)
                      .+.+..+.++.+   +...+..+.-++|.|+.+...-..+.  .-.+--.++..+  |++...+..|.-+.+.|+.+.+.
T Consensus        86 ~~l~~Dv~vse~---yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vs--Gn~aYVadlddgfLivdvsdpss  160 (370)
T COG5276          86 RDLFADVRVSEE---YVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVS--GNYAYVADLDDGFLIVDVSDPSS  160 (370)
T ss_pred             hhhhheeEeccc---EEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEec--CCEEEEeeccCcEEEEECCCCCC
Confidence            345567777643   56666677779999998765332222  122444555555  88888888777788899886543


Q ss_pred             e---eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecC
Q psy17682        293 E---EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKG  369 (490)
Q Consensus       293 ~---~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~  369 (490)
                      .   ........ ....++.|-+-  -..+.   .++-+.+-|+.....|..........++.++..+++.-++ +..  
T Consensus       161 P~lagrya~~~~-d~~~v~ISGn~--AYvA~---~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~-vvy--  231 (370)
T COG5276         161 PQLAGRYALPGG-DTHDVAISGNY--AYVAW---RDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYL-VVY--  231 (370)
T ss_pred             ceeeeeeccCCC-CceeEEEecCe--EEEEE---eCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEE-EEc--
Confidence            2   22222222 13455555443  33333   4778999999988888877766665678888888777666 333  


Q ss_pred             CCeEEEEEecCCC
Q psy17682        370 DSVIRYFEITAEP  382 (490)
Q Consensus       370 dg~i~iwd~~~~~  382 (490)
                      +.-+.+-|..+.+
T Consensus       232 ~egvlivd~s~~s  244 (370)
T COG5276         232 DEGVLIVDVSGPS  244 (370)
T ss_pred             ccceEEEecCCCC
Confidence            3446677777655

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=87.66  E-value=2.6  Score=36.81  Aligned_cols=76  Identities=12%  Similarity=0.200  Sum_probs=50.2

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeec--------ccccCEEEEEEeeCCCCEEEEEeCCC
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLL--------YHQRRVGLVLWHPTAQNVLLTAGSDN  238 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--------~~~~~v~~~~~~p~~~~~l~s~~~dg  238 (490)
                      ++..+...  + .+|++-..+|.+++||+.+++.+..-. ++..+.        .....|..+..+.+|. -+++-+ +|
T Consensus        14 ~~~~l~~~--~-~~Ll~iT~~G~l~vWnl~~~k~~~~~~-Si~pll~~~~~~~~~~~~~i~~~~lt~~G~-PiV~ls-ng   87 (219)
T PF07569_consen   14 PVSFLECN--G-SYLLAITSSGLLYVWNLKKGKAVLPPV-SIAPLLNSSPVSDKSSSPNITSCSLTSNGV-PIVTLS-NG   87 (219)
T ss_pred             ceEEEEeC--C-CEEEEEeCCCeEEEEECCCCeeccCCc-cHHHHhcccccccCCCCCcEEEEEEcCCCC-EEEEEe-CC
Confidence            44445543  5 788888999999999999887654321 111111        3556788888888874 555544 57


Q ss_pred             cEEEEECCCC
Q psy17682        239 NVAIWNVGTG  248 (490)
Q Consensus       239 ~v~iwd~~~~  248 (490)
                      ..+.|+..-+
T Consensus        88 ~~y~y~~~L~   97 (219)
T PF07569_consen   88 DSYSYSPDLG   97 (219)
T ss_pred             CEEEeccccc
Confidence            7888886543

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=87.58  E-value=2.9  Score=24.99  Aligned_cols=41  Identities=15%  Similarity=0.337  Sum_probs=27.7

Q ss_pred             eCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEE
Q psy17682        225 PTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASW  266 (490)
Q Consensus       225 p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~  266 (490)
                      |+++.++++...++.|.++|..+++.+..+.. ......++|
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v-g~~P~~i~~   41 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV-GGYPFGVAV   41 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC-CCCCceEEe
Confidence            45654555565688999999999888887774 233334444

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>KOG3616|consensus

Probab=87.39  E-value=14  Score=37.64  Aligned_cols=69  Identities=14%  Similarity=0.196  Sum_probs=47.2

Q ss_pred             ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEE
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIW  243 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iw  243 (490)
                      ....++++.-+|.+ .-++++..||+|++|+.......+...        ...+-..+.|...|   |+++..|..+.-|
T Consensus        13 ~~e~~~aiqshp~~-~s~v~~~~d~si~lfn~~~r~qski~~--------~~~p~~nlv~tnhg---l~~~tsdrr~la~   80 (1636)
T KOG3616|consen   13 EDEFTTAIQSHPGG-QSFVLAHQDGSIILFNFIPRRQSKICE--------EAKPKENLVFTNHG---LVTATSDRRALAW   80 (1636)
T ss_pred             ccceeeeeeecCCC-ceEEEEecCCcEEEEeecccchhhhhh--------hcCCccceeeeccc---eEEEeccchhhee
Confidence            34567888889966 899999999999999986554422211        22334556666554   5666677777777


Q ss_pred             E
Q psy17682        244 N  244 (490)
Q Consensus       244 d  244 (490)
                      .
T Consensus        81 ~   81 (1636)
T KOG3616|consen   81 K   81 (1636)
T ss_pred             e
Confidence            6

>KOG2247|consensus

Probab=87.34  E-value=0.089  Score=49.89  Aligned_cols=144  Identities=13%  Similarity=0.115  Sum_probs=94.2

Q ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC
Q psy17682        259 DIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE  338 (490)
Q Consensus       259 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~  338 (490)
                      .......|-|++..++.++.+..+..||-. ++....... .+ ....++|..+|..++....  ..+.+.+||+.+...
T Consensus        35 v~pi~~~w~~e~~nlavaca~tiv~~YD~a-gq~~le~n~-tg-~aldm~wDkegdvlavlAe--k~~piylwd~n~eyt  109 (615)
T KOG2247|consen   35 VGPIIHRWRPEGHNLAVACANTIVIYYDKA-GQVILELNP-TG-KALDMAWDKEGDVLAVLAE--KTGPIYLWDVNSEYT  109 (615)
T ss_pred             cccceeeEecCCCceehhhhhhHHHhhhhh-cceecccCC-ch-hHhhhhhccccchhhhhhh--cCCCeeechhhhhhH
Confidence            334456788888778888888889999854 333322221 22 2567778888776655443  477899999986432


Q ss_pred             CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCceeEEeecc
Q psy17682        339 PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       339 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~  414 (490)
                      ...  +......-.-+.|++.+..+ +.|...|.+.|++..+.+    .....+ +...++++++.+.+..+..+|.
T Consensus       110 qqL--E~gg~~s~sll~wsKg~~el-~ig~~~gn~viynhgtsR----~iiv~Gkh~RRgtq~av~lEd~vil~dcd  179 (615)
T KOG2247|consen  110 QQL--ESGGTSSKSLLAWSKGTPEL-VIGNNAGNIVIYNHGTSR----RIIVMGKHQRRGTQIAVTLEDYVILCDCD  179 (615)
T ss_pred             HHH--hccCcchHHHHhhccCCccc-cccccccceEEEeccchh----hhhhhcccccceeEEEecccceeeecCcH
Confidence            111  11222223337889988888 678888999999998875    222233 4467889999988776555443

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=87.08  E-value=31  Score=33.51  Aligned_cols=152  Identities=12%  Similarity=0.062  Sum_probs=85.9

Q ss_pred             CCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEee---CCCCEEEEEeCCCcEEEEECCC--C
Q psy17682        174 SPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP---TAQNVLLTAGSDNNVAIWNVGT--G  248 (490)
Q Consensus       174 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p---~~~~~l~s~~~dg~v~iwd~~~--~  248 (490)
                      ++++...+++|+..|.++||+...+.....   ...--..-..+|..+..-+   ..+...++.-.-..+.||.+..  +
T Consensus        33 ~~~~~d~IivGS~~G~LrIy~P~~~~~~~~---~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g  109 (418)
T PF14727_consen   33 SPSGSDKIIVGSYSGILRIYDPSGNEFQPE---DLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDG  109 (418)
T ss_pred             CCCCccEEEEeccccEEEEEccCCCCCCCc---cEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCC
Confidence            344557999999999999999754432110   1111112445676666542   2222333335667888887731  1


Q ss_pred             e-------eEEEEecC--CCcEEEEEEcC----C-CCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc
Q psy17682        249 E-------IMIQIECH--PDIVYSASWNW----D-GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL  314 (490)
Q Consensus       249 ~-------~~~~~~~~--~~~v~~~~~~~----~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~  314 (490)
                      .       .+..+..|  ......++.-|    . ..+|.+-+.||.+.+|+-+.-.....+..  -.....+.|.+.-.
T Consensus       110 ~~~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~--~llPgPl~Y~~~tD  187 (418)
T PF14727_consen  110 TVEHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD--FLLPGPLCYCPRTD  187 (418)
T ss_pred             CcccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC--CCCCcCeEEeecCC
Confidence            1       11111122  22334444443    2 25788889999999998665443333332  22356677888877


Q ss_pred             EEEEEeCCCceeEEEEecC
Q psy17682        315 IFTTGFSKMSERQYSLRAP  333 (490)
Q Consensus       315 ~l~~~~~~~~~~~i~iwd~  333 (490)
                      .|++++   ....+..|..
T Consensus       188 sfvt~s---ss~~l~~Yky  203 (418)
T PF14727_consen  188 SFVTAS---SSWTLECYKY  203 (418)
T ss_pred             EEEEec---CceeEEEecH
Confidence            777776   4667777654

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=86.85  E-value=5.6  Score=33.30  Aligned_cols=34  Identities=21%  Similarity=0.167  Sum_probs=28.9

Q ss_pred             cCCeeEeccccccce-EEEEEeeCCCceEEEECCC
Q psy17682        112 TANEITISEDYVKEF-KEEIRKLKSQQALSILPPP  145 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~-~~~~~~~~~~g~i~v~~~~  145 (490)
                      .+..++|||.++... .+++++...++.+.+|...
T Consensus        87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~  121 (173)
T PF12657_consen   87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP  121 (173)
T ss_pred             cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence            788999999887555 7788999999999999764

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>PRK13684 Ycf48-like protein; Provisional

Probab=86.01  E-value=31  Score=32.51  Aligned_cols=152  Identities=11%  Similarity=0.051  Sum_probs=83.7

Q ss_pred             ccCEEEEEEeeCCCCEEEEEeCCCcEEEE-ECCCCeeEEEEe-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy17682        215 QRRVGLVLWHPTAQNVLLTAGSDNNVAIW-NVGTGEIMIQIE-CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI  292 (490)
Q Consensus       215 ~~~v~~~~~~p~~~~~l~s~~~dg~v~iw-d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  292 (490)
                      ...+.++.+.|++. ++ ..+..|.+..- | ..++....+. .-...++++.+.++++.++++ ..|.+++=....+..
T Consensus       172 ~g~~~~i~~~~~g~-~v-~~g~~G~i~~s~~-~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~s  247 (334)
T PRK13684        172 AGVVRNLRRSPDGK-YV-AVSSRGNFYSTWE-PGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLES  247 (334)
T ss_pred             cceEEEEEECCCCe-EE-EEeCCceEEEEcC-CCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCc
Confidence            45688999999873 44 44455655432 2 2222222222 345678999999998877765 457665323344432


Q ss_pred             eeeeeec---CCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe-ccCCCceeeeeecCCCCeEEEEec
Q psy17682        293 EEEAVCH---EGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE-LDTSNGVMFPLYDPDTNLVYLCGK  368 (490)
Q Consensus       293 ~~~~~~~---~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~g~  368 (490)
                      -.....+   ....+..+.+.+++.++++|.    ++.+.. ..+.++.-..... .........+.|..+++.+ ++| 
T Consensus       248 W~~~~~~~~~~~~~l~~v~~~~~~~~~~~G~----~G~v~~-S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~-~~G-  320 (334)
T PRK13684        248 WSKPIIPEITNGYGYLDLAYRTPGEIWAGGG----NGTLLV-SKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGF-VLG-  320 (334)
T ss_pred             cccccCCccccccceeeEEEcCCCCEEEEcC----CCeEEE-eCCCCCCCeECCcCCCCCcceEEEEEeCCCceE-EEC-
Confidence            2211111   222367888999988888774    555543 3333332111111 1112346777777666665 554 


Q ss_pred             CCCeEEEEE
Q psy17682        369 GDSVIRYFE  377 (490)
Q Consensus       369 ~dg~i~iwd  377 (490)
                      ..|.|-.|+
T Consensus       321 ~~G~il~~~  329 (334)
T PRK13684        321 QRGVLLRYV  329 (334)
T ss_pred             CCceEEEec
Confidence            578776665

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=85.95  E-value=21  Score=30.51  Aligned_cols=108  Identities=9%  Similarity=0.029  Sum_probs=63.0

Q ss_pred             CEEEEEeCC--CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec
Q psy17682        179 NVIASGSED--CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC  256 (490)
Q Consensus       179 ~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~  256 (490)
                      .++.+.+.-  ..|++||+.+++.+....-+.  -......++.+     ++.+..-.-.+|.-..+|.++-+.+..+. 
T Consensus        57 ~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~--~~~FgEGit~~-----gd~~y~LTw~egvaf~~d~~t~~~lg~~~-  128 (262)
T COG3823          57 HILESTGLYGFSKIRVSDLTTGQEIFSEKLAP--DTVFGEGITKL-----GDYFYQLTWKEGVAFKYDADTLEELGRFS-  128 (262)
T ss_pred             EEEEeccccccceeEEEeccCceEEEEeecCC--ccccccceeec-----cceEEEEEeccceeEEEChHHhhhhcccc-
Confidence            566665543  379999999998766533210  01122223222     22233333357888889998888877776 


Q ss_pred             CCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeee
Q psy17682        257 HPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEA  296 (490)
Q Consensus       257 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  296 (490)
                      ..+.=..++-  |+..|+.++...+++.-|..+-....+.
T Consensus       129 y~GeGWgLt~--d~~~LimsdGsatL~frdP~tfa~~~~v  166 (262)
T COG3823         129 YEGEGWGLTS--DDKNLIMSDGSATLQFRDPKTFAELDTV  166 (262)
T ss_pred             cCCcceeeec--CCcceEeeCCceEEEecCHHHhhhcceE
Confidence            3444455544  5666777776677777777655443333

>PLN02153 epithiospecifier protein

Probab=85.89  E-value=32  Score=32.51  Aligned_cols=62  Identities=10%  Similarity=0.126  Sum_probs=33.0

Q ss_pred             CEEEEEeCC-----CcEEEEECCCCeeEE--EEec---CCCc-EEEEEEcCCCCEEEEEeCC-----------CeEEEEe
Q psy17682        229 NVLLTAGSD-----NNVAIWNVGTGEIMI--QIEC---HPDI-VYSASWNWDGSKLLTTCKD-----------KKMRIIN  286 (490)
Q Consensus       229 ~~l~s~~~d-----g~v~iwd~~~~~~~~--~~~~---~~~~-v~~~~~~~~~~~l~~~~~d-----------g~i~iwd  286 (490)
                      .+++.|+.+     ..+.+||+.+.+-..  .+..   .... -.+++ .-++++++.|+.+           ..+.+||
T Consensus        87 ~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd  165 (341)
T PLN02153         87 KLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMA-SDENHVYVFGGVSKGGLMKTPERFRTIEAYN  165 (341)
T ss_pred             EEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCceeeEEE-EECCEEEEECCccCCCccCCCcccceEEEEE
Confidence            477777753     357788987654221  1110   0111 11222 2356677777643           2477889


Q ss_pred             CCCCc
Q psy17682        287 PRTGA  291 (490)
Q Consensus       287 ~~~~~  291 (490)
                      ..+.+
T Consensus       166 ~~~~~  170 (341)
T PLN02153        166 IADGK  170 (341)
T ss_pred             CCCCe
Confidence            88654

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=85.81  E-value=38  Score=33.31  Aligned_cols=115  Identities=9%  Similarity=0.070  Sum_probs=62.1

Q ss_pred             ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCC---C--CEEEEEe-C-
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTA---Q--NVLLTAG-S-  236 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~---~--~~l~s~~-~-  236 (490)
                      .-..-+.|+|.|+| ++|++--..|.|++++..++........+.............|+++|+-   .  .+|+... . 
T Consensus        28 GL~~Pw~maflPDG-~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~  106 (454)
T TIGR03606        28 GLNKPWALLWGPDN-QLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYK  106 (454)
T ss_pred             CCCCceEEEEcCCC-eEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEecc
Confidence            34567899999988 6776655469999998654432111111111111136778999999873   1  1333331 1 


Q ss_pred             --------CCcEEEEECCCC-------eeEE-EEe-cCCCcEEEEEEcCCCCEEEEEeCC
Q psy17682        237 --------DNNVAIWNVGTG-------EIMI-QIE-CHPDIVYSASWNWDGSKLLTTCKD  279 (490)
Q Consensus       237 --------dg~v~iwd~~~~-------~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~~d  279 (490)
                              ...|.-|.+...       +.+. .+. ...+.-..|+|.|||.++++.+..
T Consensus       107 ~~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~LYVs~GD~  166 (454)
T TIGR03606       107 NGDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGKIYYTIGEQ  166 (454)
T ss_pred             CCCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCcEEEEECCC
Confidence                    233444554321       1111 111 111224578899999877765543

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>PRK13684 Ycf48-like protein; Provisional

Probab=84.77  E-value=35  Score=32.11  Aligned_cols=230  Identities=13%  Similarity=0.053  Sum_probs=106.9

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC-cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEE
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG-ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIW  243 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iw  243 (490)
                      ...+.+|.|.... +-+++|. +|.  ||...++. .-......   +......+.++.|.++  ..+++ +..+.|..-
T Consensus        45 ~~~l~~v~F~d~~-~g~avG~-~G~--il~T~DgG~tW~~~~~~---~~~~~~~l~~v~~~~~--~~~~~-G~~g~i~~S  114 (334)
T PRK13684         45 EANLLDIAFTDPN-HGWLVGS-NRT--LLETNDGGETWEERSLD---LPEENFRLISISFKGD--EGWIV-GQPSLLLHT  114 (334)
T ss_pred             CCceEEEEEeCCC-cEEEEEC-CCE--EEEEcCCCCCceECccC---CcccccceeeeEEcCC--cEEEe-CCCceEEEE
Confidence            5578899998433 5566654 454  45444433 22221110   1112234677877643  24444 445543321


Q ss_pred             ECCCCeeEEEEe---cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEe
Q psy17682        244 NVGTGEIMIQIE---CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       244 d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~  320 (490)
                       -+.|+.-..+.   ........+.....+..+++ +..|.|..=+ ..++.-..+.......+..+.+.+++.+++++.
T Consensus       115 -~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~-g~~G~i~~S~-DgG~tW~~~~~~~~g~~~~i~~~~~g~~v~~g~  191 (334)
T PRK13684        115 -TDGGKNWTRIPLSEKLPGSPYLITALGPGTAEMA-TNVGAIYRTT-DGGKNWEALVEDAAGVVRNLRRSPDGKYVAVSS  191 (334)
T ss_pred             -CCCCCCCeEccCCcCCCCCceEEEEECCCcceee-eccceEEEEC-CCCCCceeCcCCCcceEEEEEECCCCeEEEEeC
Confidence             12233222221   01111222222222233333 3344443221 122222222212222478889999998888885


Q ss_pred             CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee-eeCCCceee
Q psy17682        321 SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT-FQTPDPQRG  399 (490)
Q Consensus       321 ~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~i~~  399 (490)
                          .|.+..- .+................+..+.+.++++.+ +.| ..|.+++=....+......... ......+.+
T Consensus       192 ----~G~i~~s-~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~-~vg-~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~  264 (334)
T PRK13684        192 ----RGNFYST-WEPGQTAWTPHQRNSSRRLQSMGFQPDGNLW-MLA-RGGQIRFNDPDDLESWSKPIIPEITNGYGYLD  264 (334)
T ss_pred             ----CceEEEE-cCCCCCeEEEeeCCCcccceeeeEcCCCCEE-EEe-cCCEEEEccCCCCCccccccCCccccccceee
Confidence                4544431 1122221222222344568899999999876 445 4565542233444322111110 111235788


Q ss_pred             EEEeeCceeEEeecc
Q psy17682        400 IGMMPKRGCDVNSCE  414 (490)
Q Consensus       400 ~~~sp~~~~l~~~~~  414 (490)
                      +.+.|++.+.+.+..
T Consensus       265 v~~~~~~~~~~~G~~  279 (334)
T PRK13684        265 LAYRTPGEIWAGGGN  279 (334)
T ss_pred             EEEcCCCCEEEEcCC
Confidence            899998877666544

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=84.30  E-value=5.3  Score=40.68  Aligned_cols=69  Identities=17%  Similarity=0.170  Sum_probs=43.5

Q ss_pred             CEEEEEeCCCcEEEEECCC----CeeEEEE--ec--------------------CCCcEEEEEEcC----CCCEEEEEeC
Q psy17682        229 NVLLTAGSDNNVAIWNVGT----GEIMIQI--EC--------------------HPDIVYSASWNW----DGSKLLTTCK  278 (490)
Q Consensus       229 ~~l~s~~~dg~v~iwd~~~----~~~~~~~--~~--------------------~~~~v~~~~~~~----~~~~l~~~~~  278 (490)
                      ..++.+..||.+.......    +......  ..                    ....+..++++.    +..++++.+.
T Consensus       159 ~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~tl~~  238 (547)
T PF11715_consen  159 ANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFTLSR  238 (547)
T ss_dssp             SBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEEEET
T ss_pred             CEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEEEeC
Confidence            4677778888888777654    2221111  10                    123455666666    6689999999


Q ss_pred             CCeEEEEeCCCCceeeeee
Q psy17682        279 DKKMRIINPRTGAIEEEAV  297 (490)
Q Consensus       279 dg~i~iwd~~~~~~~~~~~  297 (490)
                      |+++|+||+.+++++.+..
T Consensus       239 D~~LRiW~l~t~~~~~~~~  257 (547)
T PF11715_consen  239 DHTLRIWSLETGQCLATID  257 (547)
T ss_dssp             TSEEEEEETTTTCEEEEEE
T ss_pred             CCeEEEEECCCCeEEEEec
Confidence            9999999999999977654

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=83.91  E-value=33  Score=31.07  Aligned_cols=198  Identities=12%  Similarity=0.057  Sum_probs=117.2

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN  244 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd  244 (490)
                      .+-+..+.++.   +++..+..+.-++|.|+.+......+..     ....+.-.++..  .| ++...+..|.-+.+.|
T Consensus        86 ~~l~~Dv~vse---~yvyvad~ssGL~IvDIS~P~sP~~~~~-----lnt~gyaygv~v--sG-n~aYVadlddgfLivd  154 (370)
T COG5276          86 RDLFADVRVSE---EYVYVADWSSGLRIVDISTPDSPTLIGF-----LNTDGYAYGVYV--SG-NYAYVADLDDGFLIVD  154 (370)
T ss_pred             hhhhheeEecc---cEEEEEcCCCceEEEeccCCCCcceecc-----ccCCceEEEEEe--cC-CEEEEeeccCcEEEEE
Confidence            45677788873   6788888888899999987654332221     112233344433  45 4777777565677788


Q ss_pred             CCCCe---eEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee-ecCCCceeEEEEeCCCcEEEEEe
Q psy17682        245 VGTGE---IMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV-CHEGSKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       245 ~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~~~  320 (490)
                      +.+.+   ...++.........++.|  |++-..+..|+-+.+.|+.......-+. -..+.-+..+..+++-.+++...
T Consensus       155 vsdpssP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy~  232 (370)
T COG5276         155 VSDPSSPQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVYD  232 (370)
T ss_pred             CCCCCCceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEcc
Confidence            87543   344444444445677776  7777888889999999998765332222 11222377777887777777663


Q ss_pred             CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        321 SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       321 ~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                           --+.+-|......+..+-.......+..-.+.-.+++.++ ...+.-+.+-|+.+.
T Consensus       233 -----egvlivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yv-adga~gl~~idisnp  287 (370)
T COG5276         233 -----EGVLIVDVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYV-ADGAKGLPIIDISNP  287 (370)
T ss_pred             -----cceEEEecCCCCCceEeeccccCCcccccceecccceeee-eccccCceeEeccCC
Confidence                 3466667776665555443333332222133334566543 344555666676654

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=83.88  E-value=7.4  Score=32.56  Aligned_cols=31  Identities=16%  Similarity=0.376  Sum_probs=25.2

Q ss_pred             CEEEEEEeeCC-----CCEEEEEeCCCcEEEEECCC
Q psy17682        217 RVGLVLWHPTA-----QNVLLTAGSDNNVAIWNVGT  247 (490)
Q Consensus       217 ~v~~~~~~p~~-----~~~l~s~~~dg~v~iwd~~~  247 (490)
                      .+..++|+|.|     +.+|++...++.|.||....
T Consensus        87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            78999999953     45788889999999998653

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=83.56  E-value=7.6  Score=28.20  Aligned_cols=53  Identities=11%  Similarity=0.160  Sum_probs=32.5

Q ss_pred             EecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCcee-EEeecceeEEEEec
Q psy17682        366 CGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGC-DVNSCEIGRFFRLN  422 (490)
Q Consensus       366 ~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~-l~~~~~~~~~~~~~  422 (490)
                      .+..+|.+.-||..+++ ..-.+..+   ...+++++++|+.+ +++.....|+.+.+
T Consensus        32 e~~~~GRll~ydp~t~~-~~vl~~~L---~fpNGVals~d~~~vlv~Et~~~Ri~ryw   85 (89)
T PF03088_consen   32 EGRPTGRLLRYDPSTKE-TTVLLDGL---YFPNGVALSPDESFVLVAETGRYRILRYW   85 (89)
T ss_dssp             HT---EEEEEEETTTTE-EEEEEEEE---SSEEEEEE-TTSSEEEEEEGGGTEEEEEE
T ss_pred             cCCCCcCEEEEECCCCe-EEEehhCC---CccCeEEEcCCCCEEEEEeccCceEEEEE
Confidence            35567888899999886 11122222   36799999999985 45556666776654

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=83.42  E-value=43  Score=31.96  Aligned_cols=211  Identities=11%  Similarity=0.145  Sum_probs=103.5

Q ss_pred             EEeccCCC--ceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceE
Q psy17682         50 VLWHPTAQ--NVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFK  127 (490)
Q Consensus        50 v~~~p~~~--~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~  127 (490)
                      |=.+|..+  .+++...+++-+.++|++......                   +. .+..+.......+.+.    .+..
T Consensus        59 IWvnp~dp~kSlIigTdK~~GL~VYdL~Gk~lq~-------------------~~-~Gr~NNVDvrygf~l~----g~~v  114 (381)
T PF02333_consen   59 IWVNPADPAKSLIIGTDKKGGLYVYDLDGKELQS-------------------LP-VGRPNNVDVRYGFPLN----GKTV  114 (381)
T ss_dssp             EE--SS-GGG-EEEEEETTTEEEEEETTS-EEEE-------------------E--SS-EEEEEEEEEEEET----TEEE
T ss_pred             EecCCCCcccceEEEEeCCCCEEEEcCCCcEEEe-------------------ec-CCCcceeeeecceecC----CceE
Confidence            33355432  678888888999999998754211                   10 0000111111112221    2223


Q ss_pred             EEEEeeCCC---ceEEEECCCCCCCCcccCCC---CcceeecccCCeeEEEE--CC-CCCCEEEEEeCCCcEEEEECCCC
Q psy17682        128 EEIRKLKSQ---QALSILPPPSTAPNTGRINA---DHALVGGHKGPVLDIAW--SP-HDDNVIASGSEDCVVKVWQIPDG  198 (490)
Q Consensus       128 ~~~~~~~~~---g~i~v~~~~~~~~~~~~~~~---~~~~~~~h~~~V~~~~~--~p-~~~~~l~s~~~dg~i~iwd~~~~  198 (490)
                      .+++++..+   ..|++|.+...   .+.+..   .-..+..--..++.+|+  +| +|..+++....+|.+..|.+...
T Consensus       115 Dlavas~R~~g~n~l~~f~id~~---~g~L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~  191 (381)
T PF02333_consen  115 DLAVASDRSDGRNSLRLFRIDPD---TGELTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDD  191 (381)
T ss_dssp             EEEEEEE-CCCT-EEEEEEEETT---TTEEEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-
T ss_pred             EEEEEecCcCCCCeEEEEEecCC---CCcceEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeC
Confidence            344444432   57888877521   111100   00011111234677776  44 35467888899999998887532


Q ss_pred             CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC-----CeeEEEEec--CCCcEEEEEEcC--C
Q psy17682        199 GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT-----GEIMIQIEC--HPDIVYSASWNW--D  269 (490)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~-----~~~~~~~~~--~~~~v~~~~~~~--~  269 (490)
                      ..-..-...+..+. -.+.+..+....... .|+.+-++.-|.-|+.+-     ++.+....+  ....|..|++-.  +
T Consensus       192 ~~g~v~~~lVR~f~-~~sQ~EGCVVDDe~g-~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~  269 (381)
T PF02333_consen  192 GDGKVSATLVREFK-VGSQPEGCVVDDETG-RLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSD  269 (381)
T ss_dssp             TTSSEEEEEEEEEE--SS-EEEEEEETTTT-EEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CC
T ss_pred             CCCcEeeEEEEEec-CCCcceEEEEecccC-CEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCC
Confidence            11110012222333 234678888887764 899999988788887762     222322222  345677777643  4


Q ss_pred             CC-EEEEEe-CCCeEEEEeCCC
Q psy17682        270 GS-KLLTTC-KDKKMRIINPRT  289 (490)
Q Consensus       270 ~~-~l~~~~-~dg~i~iwd~~~  289 (490)
                      ++ +|++++ .+++..+|+.+.
T Consensus       270 g~gYLivSsQG~~sf~Vy~r~~  291 (381)
T PF02333_consen  270 GKGYLIVSSQGDNSFAVYDREG  291 (381)
T ss_dssp             C-EEEEEEEGGGTEEEEEESST
T ss_pred             CCeEEEEEcCCCCeEEEEecCC
Confidence            43 455544 567899999764

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=83.38  E-value=29  Score=29.94  Aligned_cols=48  Identities=17%  Similarity=0.242  Sum_probs=35.8

Q ss_pred             EEEEEeCCCcEEEEECC--CCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC
Q psy17682        230 VLLTAGSDNNVAIWNVG--TGEIMIQIECHPDIVYSASWNWDGSKLLTTCK  278 (490)
Q Consensus       230 ~l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  278 (490)
                      .|+.+...+.|.+|++.  ..+...+|.. -+.|..+.++..|++|+|--.
T Consensus        30 ~Lfva~~g~~Vev~~l~~~~~~~~~~F~T-v~~V~~l~y~~~GDYlvTlE~   79 (215)
T PF14761_consen   30 ALFVAASGCKVEVYDLEQEECPLLCTFST-VGRVLQLVYSEAGDYLVTLEE   79 (215)
T ss_pred             eEEEEcCCCEEEEEEcccCCCceeEEEcc-hhheeEEEeccccceEEEEEe
Confidence            34333556789999988  3346667764 478999999999999998753

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=81.33  E-value=6.7  Score=23.00  Aligned_cols=30  Identities=17%  Similarity=0.357  Sum_probs=21.8

Q ss_pred             ccCCeeEEEECCCCCCEEEEEeCC--CcEEEE
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGSED--CVVKVW  193 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~~d--g~i~iw  193 (490)
                      ..+.-....|+|||+.++.++..+  |.-.||
T Consensus         7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             CCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            345677889999997777777777  776666

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=81.25  E-value=48  Score=31.09  Aligned_cols=152  Identities=13%  Similarity=0.165  Sum_probs=86.6

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCc------EEEEECCCC-Ccccccc-cceeeecccc--------cCEEEEEEeeCCC
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCV------VKVWQIPDG-GISRTLT-EPVVDLLYHQ--------RRVGLVLWHPTAQ  228 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~------i~iwd~~~~-~~~~~~~-~~~~~~~~~~--------~~v~~~~~~p~~~  228 (490)
                      -+.+.++.+.|++ ..+++-+.+|.      +...++... .....+. .....+..-.        -...+|++.+++.
T Consensus        19 ~GGlSgl~~~~~~-~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~   97 (326)
T PF13449_consen   19 FGGLSGLDYDPDD-GRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGS   97 (326)
T ss_pred             cCcEeeEEEeCCC-CEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCC
Confidence            4678889999755 45666677777      555555431 1111100 0001111111        1345788867764


Q ss_pred             CEEEEEeCC------CcEEEEECCCCeeEEEEe---------------cCCCcEEEEEEcCCCCEEEEEeC-----CC--
Q psy17682        229 NVLLTAGSD------NNVAIWNVGTGEIMIQIE---------------CHPDIVYSASWNWDGSKLLTTCK-----DK--  280 (490)
Q Consensus       229 ~~l~s~~~d------g~v~iwd~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~l~~~~~-----dg--  280 (490)
                       ++++.-.+      ..|..++.. |+.+..+.               .......+|+++|+|+.|+++.+     |+  
T Consensus        98 -~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~  175 (326)
T PF13449_consen   98 -FWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPR  175 (326)
T ss_pred             -EEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCcc
Confidence             77766666      678888876 65544431               13455789999999997766643     22  


Q ss_pred             ---------eEEEEeCCC-Cceeeeee--ec------CCCceeEEEEeCCCcEEEEE
Q psy17682        281 ---------KMRIINPRT-GAIEEEAV--CH------EGSKATRAIYLKSGLIFTTG  319 (490)
Q Consensus       281 ---------~i~iwd~~~-~~~~~~~~--~~------~~~~~~~~~~s~~~~~l~~~  319 (490)
                               .|..||..+ +.....+.  ..      ....++.+.+.+++++|+.-
T Consensus       176 ~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLE  232 (326)
T PF13449_consen  176 ANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLE  232 (326)
T ss_pred             cccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEE
Confidence                     244455554 32333222  11      23458899999999877754

>KOG3522|consensus

Probab=80.48  E-value=20  Score=37.25  Aligned_cols=148  Identities=14%  Similarity=0.044  Sum_probs=82.8

Q ss_pred             EEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccccccee
Q psy17682        130 IRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV  209 (490)
Q Consensus       130 ~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  209 (490)
                      +..++..+.+.++.-.    ..................+.++.+++.   -+..|.-||++-.|--..... ..- .|..
T Consensus       550 ic~gtq~ssisissss----~~s~ke~~~~~~spe~~~v~~l~~ss~---Slgagl~dgt~a~y~rap~gS-wd~-ep~~  620 (925)
T KOG3522|consen  550 ICLGTQTSSISISSSS----LDSIKEVTSEPPSPEHESVKLLLFSSG---SLGAGLIDGTLAVYGRAPSGS-WDG-EPNI  620 (925)
T ss_pred             ccccCccceeEEeecc----CCcccceeccCCCCchhhhhhhhcccc---ccccCccCCccccccCCCCCC-CCC-CCcc
Confidence            5557777888887653    111111112222234467888888762   355555566655543221111 100 1222


Q ss_pred             eecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe---cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy17682        210 DLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE---CHPDIVYSASWNWDGSKLLTTCKDKKMRIIN  286 (490)
Q Consensus       210 ~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd  286 (490)
                      .+.--..+|.+.++..+    ++.++.+|.|.++...+......+.   .|...|+++...-++-+++..+. ..+++++
T Consensus       621 ~~~~g~lPvrsla~~ed----~~was~gG~V~vi~~tt~~~~~~leahqee~~~Vthm~~~~~gVwvafasG-~~~rlfh  695 (925)
T KOG3522|consen  621 SIPTGSLPVRSLAFQED----FVWASEGGCVHVIPSTTFIRSWDLEAHQEEAHSVTHMLYLDNGVWVAFASG-DEERLFH  695 (925)
T ss_pred             ccccCCccccchhhhhc----eeeeecCCceEEEechhccccchhHHHHhhcceEEEEEeeCCceEEEEcCC-CEEEEec
Confidence            22224567888887643    5667788999999988766555544   35677999998866655554443 4566666


Q ss_pred             CCCCc
Q psy17682        287 PRTGA  291 (490)
Q Consensus       287 ~~~~~  291 (490)
                      ..+..
T Consensus       696 tetl~  700 (925)
T KOG3522|consen  696 TETLW  700 (925)
T ss_pred             ccccC
Confidence            55443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	490
2b4e_A	402	Crystal Structure Of Murine Coronin-1: Monoclinic F		1e-109
2aq5_A	402	Crystal Structure Of Murine Coronin-1 Length = 402		1e-108
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		1e-10
2gnq_A	336	Structure Of Wdr5 Length = 336		1e-10
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		1e-10
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		1e-10
2h9l_A	329	Wdr5delta23 Length = 329		1e-10
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		1e-10
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		1e-10
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		1e-10
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		1e-10
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		1e-10
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		2e-10
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		2e-10
2g99_A	308	Structural Basis For The Specific Recognition Of Me		2e-10
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		2e-10
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		2e-10
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		3e-10
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		3e-10
4ggd_A	431	Structural Analysis Of Human Cdc20 Supports Multisi		9e-08
4gga_A	420	Structural Analysis Of Human Cdc20 Supports Multi-S		9e-08
4ggc_A	318	Structural Analysis Of Human Cdc20 Supports Multi-S		3e-07
2ynp_A	604	Yeast Betaprime Cop 1-604 With Ktktn Motif Length =		4e-07
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		4e-07
3mkq_A	814	Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco		4e-07
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		5e-07
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		5e-07
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		8e-07
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		1e-06
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		2e-05
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		1e-06
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		2e-05
3gfc_A	425	Crystal Structure Of Histone-Binding Protein Rbbp4		2e-05
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		4e-05
4a11_B	408	Structure Of The Hsddb1-Hscsa Complex Length = 408		6e-05
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		9e-05
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		1e-04
2hes_X	330	Cytosolic Iron-sulphur Assembly Protein- 1 Length =		2e-04
4aez_A	401	Crystal Structure Of Mitotic Checkpoint Complex Len		2e-04
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		3e-04
3jro_A	753	Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice		3e-04
2xyi_A	430	Crystal Structure Of Nurf55 In Complex With A H4 Pe		5e-04
3c99_A	432	Structural Basis Of Histone H4 Recognition By P55 L		6e-04
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		6e-04
2yba_A	422	Crystal Structure Of Nurf55 In Complex With Histone		7e-04

>pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402

Iteration: 1
 Score =  392 bits (1007), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 179/320 (55%), Positives = 239/320 (74%), Gaps = 4/320 (1%)
Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV 209
            TGR++ +  LV GH  PVLDIAW PH+DNVIASGSEDC V VW+IPDGG+   L EPV+
Sbjct: 66  KTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVI 125
Query: 210 DLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI--ECHPDIVYSASWN 267
            L  H +RVG+V WHPTAQNVLL+AG DN + +W+VGTG  ++ +  + HPD +YS  W+
Sbjct: 126 TLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWS 185
Query: 268 WDGSKLLTTCKDKKMRIINPRTG-AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSER 326
            DG+ + T+C+DK++R+I PR G  + E+   HEG++   A+++  G I TTGFS+MSER
Sbjct: 186 RDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSER 245
Query: 327 QYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVH 386
           Q +L    HL+EP+ + ELDTS+GV+ P +DPDTN+VYLCGKGDS IRYFEIT+E PF+H
Sbjct: 246 QVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLH 305
Query: 387 YINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLY 446
           Y++ F + + QRG+G MPKRG +VN CEI RF++L+    C+ ++MTVPRKS+LFQ+DLY
Sbjct: 306 YLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLHERK-CEPIAMTVPRKSDLFQEDLY 364
Query: 447 PDTVGDTAALTADEWFAGNE 466
           P T G   ALTA+EW  G +
Sbjct: 365 PPTAGPDPALTAEEWLGGRD 384

>pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402

Iteration: 1
 Score =  389 bits (998), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 178/320 (55%), Positives = 238/320 (74%), Gaps = 4/320 (1%)
Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV 209
            TGR++ +  LV GH  PVLDIAW PH+DNVIASGSEDC V VW+IPDGG+   L EPV+
Sbjct: 66  KTGRVDKNVPLVXGHTAPVLDIAWXPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVI 125
Query: 210 DLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI--ECHPDIVYSASWN 267
            L  H +RVG+V WHPTAQNVLL+AG DN + +W+VGTG  ++ +  + HPD +YS  W+
Sbjct: 126 TLEGHTKRVGIVAWHPTAQNVLLSAGXDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWS 185
Query: 268 WDGSKLLTTCKDKKMRIINPRTG-AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSER 326
            DG+ + T+C+DK++R+I PR G  + E+   HEG++   A+++  G I TTGFS+MSER
Sbjct: 186 RDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSER 245
Query: 327 QYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVH 386
           Q +L    HL+EP+ + ELDTS+GV+ P +DPDTN+VYLCGKGDS IRYFEIT+E PF+H
Sbjct: 246 QVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLH 305
Query: 387 YINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLY 446
           Y++ F + + QRG+G MPKRG +VN  EI RF++L+    C+ ++MTVPRKS+LFQ+DLY
Sbjct: 306 YLSMFSSKESQRGMGYMPKRGLEVNKXEIARFYKLHERK-CEPIAMTVPRKSDLFQEDLY 364
Query: 447 PDTVGDTAALTADEWFAGNE 466
           P T G   ALTA+EW  G +
Sbjct: 365 PPTAGPDPALTAEEWLGGRD 384

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
           + GHK  + D+AWS  D N++ S S+D  +K+W +  G   +TL         H   V  
Sbjct: 83  ISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKG-------HSNYVFC 134
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
             ++P + N++++   D +V IW+V TG+ +  +  H D V +  +N DGS ++++  D 
Sbjct: 135 CNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 281 KMRIINPRTG 290
             RI +  +G
Sbjct: 194 LCRIWDTASG 203

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
           + GHK  + D+AWS  D N++ S S+D  +K+W +  G   +TL         H   V  
Sbjct: 85  ISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKG-------HSNYVFC 136
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
             ++P + N++++   D +V IW+V TG+ +  +  H D V +  +N DGS ++++  D 
Sbjct: 137 CNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 195
Query: 281 KMRIINPRTG 290
             RI +  +G
Sbjct: 196 LCRIWDTASG 205

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
           + GHK  + D+AWS  D N++ S S+D  +K+W +  G   +TL         H   V  
Sbjct: 64  ISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKG-------HSNYVFC 115
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
             ++P + N++++   D +V IW+V TG+ +  +  H D V +  +N DGS ++++  D 
Sbjct: 116 CNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 174
Query: 281 KMRIINPRTG 290
             RI +  +G
Sbjct: 175 LCRIWDTASG 184

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
           + GHK  + D+AWS  D N++ S S+D  +K+W +  G   +TL         H   V  
Sbjct: 64  ISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKG-------HSNYVFC 115
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
             ++P + N++++   D +V IW+V TG+ +  +  H D V +  +N DGS ++++  D 
Sbjct: 116 CNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 174
Query: 281 KMRIINPRTG 290
             RI +  +G
Sbjct: 175 LCRIWDTASG 184

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
           + GHK  + D+AWS  D N++ S S+D  +K+W +  G   +TL         H   V  
Sbjct: 78  ISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKG-------HSNYVFC 129
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
             ++P + N++++   D +V IW+V TG+ +  +  H D V +  +N DGS ++++  D 
Sbjct: 130 CNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 188
Query: 281 KMRIINPRTG 290
             RI +  +G
Sbjct: 189 LCRIWDTASG 198

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
           + GHK  + D+AWS  D N++ S S+D  +K+W +  G   +TL         H   V  
Sbjct: 67  ISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKG-------HSNYVFC 118
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
             ++P + N++++   D +V IW+V TG+ +  +  H D V +  +N DGS ++++  D 
Sbjct: 119 CNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 177
Query: 281 KMRIINPRTG 290
             RI +  +G
Sbjct: 178 LCRIWDTASG 187

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
           + GHK  + D+AWS  D N++ S S+D  +K+W +  G   +TL         H   V  
Sbjct: 67  ISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKG-------HSNYVFC 118
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
             ++P + N++++   D +V IW+V TG+ +  +  H D V +  +N DGS ++++  D 
Sbjct: 119 CNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 177
Query: 281 KMRIINPRTG 290
             RI +  +G
Sbjct: 178 LCRIWDTASG 187

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
           + GHK  + D+AWS  D N++ S S+D  +K+W +  G   +TL         H   V  
Sbjct: 61  ISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKG-------HSNYVFC 112
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
             ++P + N++++   D +V IW+V TG+ +  +  H D V +  +N DGS ++++  D 
Sbjct: 113 CNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 171
Query: 281 KMRIINPRTG 290
             RI +  +G
Sbjct: 172 LCRIWDTASG 181

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
           + GHK  + D+AWS  D N++ S S+D  +K+W +  G   +TL         H   V  
Sbjct: 67  ISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKG-------HSNYVFC 118
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
             ++P + N++++   D +V IW+V TG+ +  +  H D V +  +N DGS ++++  D 
Sbjct: 119 CNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 177
Query: 281 KMRIINPRTG 290
             RI +  +G
Sbjct: 178 LCRIWDTASG 187

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
           + GHK  + D+AWS  D N++ S S+D  +K+W +  G   +TL         H   V  
Sbjct: 64  ISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKG-------HSNYVFC 115
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
             ++P + N++++   D +V IW+V TG+ +  +  H D V +  +N DGS ++++  D 
Sbjct: 116 CNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 174
Query: 281 KMRIINPRTG 290
             RI +  +G
Sbjct: 175 LCRIWDTASG 184

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
           + GHK  + D+AWS  D N++ S S+D  +K+W +  G   +TL         H   V  
Sbjct: 61  ISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKG-------HSNYVFC 112
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
             ++P + N++++   D +V IW+V TG+ +  +  H D V +  +N DGS ++++  D 
Sbjct: 113 CNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 171
Query: 281 KMRIINPRTG 290
             RI +  +G
Sbjct: 172 LCRIWDTASG 181

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
           + GHK  + D+AWS  D N++ S S+D  +K+W +  G   +TL         H   V  
Sbjct: 62  ISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKG-------HSNYVFC 113
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
             ++P + N++++   D +V IW+V TG+ +  +  H D V +  +N DGS ++++  D 
Sbjct: 114 CNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 172
Query: 281 KMRIINPRTG 290
             RI +  +G
Sbjct: 173 LCRIWDTASG 182

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
           + GHK  + D+AWS  D N++ S S+D  +K+W +  G   +TL         H   V  
Sbjct: 57  ISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKG-------HSNYVFC 108
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
             ++P + N++++   D +V IW+V TG+ +  +  H D V +  +N DGS ++++  D 
Sbjct: 109 CNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 167
Query: 281 KMRIINPRTG 290
             RI +  +G
Sbjct: 168 LCRIWDTASG 177

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
           + GHK  + D+AWS  D N++ S S+D  +K+W +  G   +TL         H   V  
Sbjct: 66  ISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKG-------HSNYVFC 117
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
             ++P + N++++   D +V IW+V TG+ +  +  H D V +  +N DGS ++++  D 
Sbjct: 118 CNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 176
Query: 281 KMRIINPRTG 290
             RI +  +G
Sbjct: 177 LCRIWDTASG 186

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
           + GHK  + D+AWS  D N++ S S+D  +K+W +  G   +TL         H   V  
Sbjct: 60  ISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKG-------HSNYVFC 111
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
             ++P + N++++   D +V IW+V TG+ +  +  H D V +  +N DGS ++++  D 
Sbjct: 112 CNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 170
Query: 281 KMRIINPRTG 290
             RI +  +G
Sbjct: 171 LCRIWDTASG 180

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
           + GHK  + D+AWS  D N++ S S+D  +K+W +  G   +TL         H   V  
Sbjct: 64  ISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKG-------HSNYVFC 115
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
             ++P + N++++   D +V IW+V TG  +  +  H D V +  +N DGS ++++  D 
Sbjct: 116 CNFNPQS-NLIVSGSFDESVRIWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 174
Query: 281 KMRIINPRTG 290
             RI +  +G
Sbjct: 175 LCRIWDTASG 184

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL 220
           + GHK  + D+AWS  D N++ S S+D  +K+W +  G   +TL         H   V  
Sbjct: 64  ISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKG-------HSNYVFC 115
Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
             ++P + N++++   D +V IW+V TG  +  +  H D V +  +N DGS ++++  D 
Sbjct: 116 CNFNPQS-NLIVSGSFDESVRIWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 174
Query: 281 KMRIINPRTG 290
             RI +  +G
Sbjct: 175 LCRIWDTASG 184

>pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 153 RINADH-ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDL 211
           R+   H A + GH   V  + W+P D   +ASG  D +V VW    G        P+   
Sbjct: 228 RVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWV---PLQTF 283
Query: 212 LYHQRRVGLVLWHPTAQNVLLTAG--SDNNVAIWNVGTGEIMIQIECHPDI 260
             HQ  V  V W P   NVL T G  SD ++ IWNV +G  +  ++ H  +
Sbjct: 284 TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQV 334

>pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 153 RINADH-ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDL 211
           R+   H A + GH   V  + W+P D   +ASG  D +V VW    G        P+   
Sbjct: 217 RVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWV---PLQTF 272
Query: 212 LYHQRRVGLVLWHPTAQNVLLTAG--SDNNVAIWNVGTGEIMIQIECHPDI 260
             HQ  V  V W P   NVL T G  SD ++ IWNV +G  +  ++ H  +
Sbjct: 273 TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQV 323

>pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 153 RINADH-ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDL 211
           R+   H A + GH   V  + W+P D   +ASG  D +V VW    G        P+   
Sbjct: 137 RVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWV---PLQTF 192
Query: 212 LYHQRRVGLVLWHPTAQNVLLTAG--SDNNVAIWNVGTGEIMIQIECHPDI 260
             HQ  V  V W P   NVL T G  SD ++ IWNV +G  +  ++ H  +
Sbjct: 193 TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQV 243

>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
           GH+  V+ +A++P D +  ASG  D  VKVW +     + TLT         +R V  V 
Sbjct: 138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG------QERGVNYVD 191
Query: 223 WHPTAQN-VLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKK 281
           ++P      ++TA  D  + IW+  T   +  +E H   V  A ++     +++  +D  
Sbjct: 192 YYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT 251
Query: 282 MRIINPRTGAIE-------EEAVCHEGSKATRAIYLKSGLIFTTGFSKMS 324
           ++I N  T  +E       E + C       R  Y+ SG  F  GF+ +S
Sbjct: 252 LKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASG--FDNGFTVLS 299

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 12/140 (8%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
           GH   V  +A+SP DD  IAS S+D  VK+W   +G + +TLT        H   V  V 
Sbjct: 424 GHSSSVWGVAFSP-DDQTIASASDDKTVKLWN-RNGQLLQTLTG-------HSSSVRGVA 474
Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM 282
           + P  Q +  +A  D  V +WN   G+++  +  H   V   +++ DG  + +   DK +
Sbjct: 475 FSPDGQTI-ASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTV 532
Query: 283 RIINPRTGAIEEEAVCHEGS 302
           ++ N R G + +    H  S
Sbjct: 533 KLWN-RNGQLLQTLTGHSSS 551

>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
           GH+  V+ +A++P D +  ASG  D  VKVW +     + TLT         +R V  V 
Sbjct: 138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG------QERGVNYVD 191
Query: 223 WHPTAQN-VLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKK 281
           ++P      ++TA  D  + IW+  T   +  +E H   V  A ++     +++  +D  
Sbjct: 192 YYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT 251
Query: 282 MRIINPRTGAIE-------EEAVCHEGSKATRAIYLKSGLIFTTGFSKMS 324
           ++I N  T  +E       E + C       R  Y+ SG  F  GF+ +S
Sbjct: 252 LKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASG--FDNGFTVLS 299

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
           GH+  V+ +A++P D +  ASG  D  VKVW +     + TLT         +R V  V 
Sbjct: 138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG------QERGVNYVD 191
Query: 223 WHPTAQN-VLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKK 281
           ++P      ++TA  D  + IW+  T   +  +E H   V  A ++     +++  +D  
Sbjct: 192 YYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT 251
Query: 282 MRIINPRTGAIE-------EEAVCHEGSKATRAIYLKSGLIFTTGFSKMS 324
           ++I N  T  +E       E + C       R  Y+ SG  F  GF+ +S
Sbjct: 252 LKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASG--FDNGFTVLS 299

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 16/170 (9%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
           GH+  V+ +A++P D +  ASG  D  VKVW +     + TLT         +R V  V 
Sbjct: 138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG------QERGVNYVD 191
Query: 223 WHPTAQN-VLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKK 281
           ++P      ++TA  D  + IW+  T   +  +E H   V  A ++     +++  +D  
Sbjct: 192 YYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT 251
Query: 282 MRIINPRTGAIE-------EEAVCHEGSKATRAIYLKSGLIFTTGFSKMS 324
           ++I N  T  +E       E + C       R  Y+ SG  F  GF+ +S
Sbjct: 252 LKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASG--FDNGFTVLS 299

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
           GH   VL +A+SP D+  I SG  D  ++VW +  G    TL+        H   V  V 
Sbjct: 107 GHTKDVLSVAFSP-DNRQIVSGGRDNALRVWNVK-GECMHTLSRGA-----HTDWVSCVR 159
Query: 223 WHPTAQN-VLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKK 281
           + P+    V+++ G DN V +W++ TG ++  ++ H + V S + + DGS   ++ KD  
Sbjct: 160 FSPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGV 219
Query: 282 MRIINPRTG-AIEEEA 296
            R+ +   G A+ E A
Sbjct: 220 ARLWDLTKGEALSEMA 235

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 65/157 (41%), Gaps = 12/157 (7%)
Query: 163  GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
            GHK  V  I ++  D   + S SED V++VW    G          V L  HQ  V    
Sbjct: 1008 GHKKAVRHIQFTA-DGKTLISSSEDSVIQVWNWQTG--------DYVFLQAHQETVKD-- 1056
Query: 223  WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM 282
            +     + LL+   D  V +WNV TG I     CH   V S + + D +K  +T  DK  
Sbjct: 1057 FRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTA 1116
Query: 283  RIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG 319
            +I +    +   E   H G     A  L  G++  TG
Sbjct: 1117 KIWSFDLLSPLHELKGHNGCVRCSAFSL-DGILLATG 1152

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 28/189 (14%)
Query: 200 ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPD 259
           +SR +  P  D +YH        +    Q +  + G+D  + ++   TGE ++ I+ H D
Sbjct: 613 LSRLVVRPHTDAVYH------ACFSQDGQRIA-SCGADKTLQVFKAETGEKLLDIKAHED 665
Query: 260 IVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI--------EEEAVCHEGSKATRAIYLK 311
            V   +++ D S + T   DKK++I +  TG +        E+   CH  +K+       
Sbjct: 666 EVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNH----- 720
Query: 312 SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS 371
             L+  TG        + L+  D   +         +N V    + PD  L+  C   D 
Sbjct: 721 --LLLATG-----SNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCS-ADG 772
Query: 372 VIRYFEITA 380
            +R +++ +
Sbjct: 773 TLRLWDVRS 781

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 65/157 (41%), Gaps = 12/157 (7%)
Query: 163  GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
            GHK  V  I ++  D   + S SED V++VW    G          V L  HQ  V    
Sbjct: 1001 GHKKAVRHIQFTA-DGKTLISSSEDSVIQVWNWQTG--------DYVFLQAHQETVKD-- 1049
Query: 223  WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM 282
            +     + LL+   D  V +WNV TG I     CH   V S + + D +K  +T  DK  
Sbjct: 1050 FRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTA 1109
Query: 283  RIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG 319
            +I +    +   E   H G     A  L  G++  TG
Sbjct: 1110 KIWSFDLLSPLHELKGHNGCVRCSAFSL-DGILLATG 1145

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 28/189 (14%)
Query: 200 ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPD 259
           +SR +  P  D +YH        +    Q +  + G+D  + ++   TGE ++ I+ H D
Sbjct: 606 LSRLVVRPHTDAVYH------ACFSQDGQRIA-SCGADKTLQVFKAETGEKLLDIKAHED 658
Query: 260 IVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI--------EEEAVCHEGSKATRAIYLK 311
            V   +++ D S + T   DKK++I +  TG +        E+   CH  +K+       
Sbjct: 659 EVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNH----- 713
Query: 312 SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS 371
             L+  TG        + L+  D   +         +N V    + PD  L+  C   D 
Sbjct: 714 --LLLATG-----SNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCS-ADG 765
Query: 372 VIRYFEITA 380
            +R +++ +
Sbjct: 766 TLRLWDVRS 774

>pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/141 (19%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Query: 146 STAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLT 205
           S  P  G++     +  GH   V D++W    +++  S ++D  + +W       S+   
Sbjct: 208 SAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSK--- 264
Query: 206 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQ-IECHPDIVYSA 264
            P   +  H   V  + ++P ++ +L T  +D  VA+W++   ++ +   E H D ++  
Sbjct: 265 -PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 323
Query: 265 SWNWDGSKLLTTC-KDKKMRI 284
            W+     +L +   D+++ +
Sbjct: 324 QWSPHNETILASSGTDRRLNV 344

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL---TEPVVDLLYHQRR 217
           + GH+ PV  + + P   +V+ S SED  +KVW    G   RTL   T+ V D+ +    
Sbjct: 104 LSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-- 160
Query: 218 VGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC 277
                    +  +L +  +D  + +W+    E +  +  H   V S S   +G  +++  
Sbjct: 161 ---------SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS 211
Query: 278 KDKKMRIINPRTG 290
           +DK +++   +TG
Sbjct: 212 RDKTIKMWEVQTG 224

>pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex Length = 408

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 20/104 (19%)
Query: 160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQ-RRV 218
           ++ GH+  +L ++WSP  D ++A+ S D  VK+W +      R  +  ++ L  H  ++ 
Sbjct: 181 ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDV------RRASGCLITLDQHNGKKS 234
Query: 219 GLVLWHPTAQN-------------VLLTAGSDNNVAIWNVGTGE 249
             V    TA N              LLT G+DN + +WN   GE
Sbjct: 235 QAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGE 278

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 34/192 (17%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
           GH+  V  + +   DD  I S S D  +KVW        RTL         H+R +  + 
Sbjct: 254 GHRAAVNVVDF---DDKYIVSASGDRTIKVWNTSTCEFVRTLNG-------HKRGIACLQ 303
Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM 282
           +      ++++  SDN + +W++  G  +  +E H ++V      +D  ++++   D K+
Sbjct: 304 YR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI--RFDNKRIVSGAYDGKI 358
Query: 283 RI------INPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKM----SERQYSLRA 332
           ++      ++PR  A         G+   R +   SG +F   F +     S    ++  
Sbjct: 359 KVWDLVAALDPRAPA---------GTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILI 409
Query: 333 PDHLDEPIVMVE 344
            D L++P    E
Sbjct: 410 WDFLNDPAAQAE 421

>pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 139 LSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG 198
           +SI     +A  T  ++   A++ GH+  V  +AWS +D   +A+ S D  V +W+  + 
Sbjct: 82  VSIWAKEESADRTFEMDL-LAIIEGHENEVKGVAWS-NDGYYLATCSRDKSVWIWETDES 139
Query: 199 GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN 244
           G      E +  L  H + V  V+WHP+ + +L ++  D+ V IW 
Sbjct: 140 GEEY---ECISVLQEHSQDVKHVIWHPS-EALLASSSYDDTVRIWK 181

>pdb|4AEZ|A Chain A, Crystal Structure Of Mitotic Checkpoint Complex Length = 401

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 24/205 (11%)
Query: 156 ADHAL--VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLY 213
           A+H +  + GH   V  +AW   D   +ASG  D VV++W       +R+ + P      
Sbjct: 206 ANHQIGTLQGHSSEVCGLAWRS-DGLQLASGGNDNVVQIWD------ARS-SIPKFTKTN 257
Query: 214 HQRRVGLVLWHPTAQNVLLTAGS--DNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS 271
           H   V  V W P   N+L T G   D  +  WN  TG  +  ++    +  S  W+    
Sbjct: 258 HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVT-SLIWSPHSK 316
Query: 272 KLLTT--CKDKKMRIINPRTGAIEEEA--VCHEGSKATRAIYLK---SGLIFTTGFSKMS 324
           ++++T    D  + I +  +  + ++     H+    TR +Y      G I +T  S  +
Sbjct: 317 EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHD----TRVLYSALSPDGRILSTAASDEN 372
Query: 325 ERQYSLRAPDHLDEPIVMVELDTSN 349
            + + +   DH+  PI + +  +S+
Sbjct: 373 LKFWRVYDGDHVKRPIPITKTPSSS 397

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Query: 168 VLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTA 227
           +  + +SP D   +A+G+ED ++++W I +  I       V+ L  H++ +  + + P+ 
Sbjct: 126 IRSVCFSP-DGKFLATGAEDRLIRIWDIENRKI-------VMILQGHEQDIYSLDYFPSG 177
Query: 228 QNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINP 287
              L++   D  V IW++ TG+  + +     +   A    DG  +     D+ +R+ + 
Sbjct: 178 DK-LVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDS 236
Query: 288 RTGAIEEE 295
            TG + E 
Sbjct: 237 ETGFLVER 244

>pdb|3JRO|A Chain A, Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice Length = 753

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 163 GHKGPVLDIAWS-PHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLV 221
           GH+GPV  + W+ P    ++AS S D  V +W+  +G  S+     V     H   V  V
Sbjct: 51  GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAV-----HSASVNSV 105
Query: 222 LWHPTAQN-VLLTAGSDNNVAIWNV---GTGEIMIQIECHPDIVYSASW 266
            W P     +LL A SD  V++      GT   +I I+ H   V SASW
Sbjct: 106 QWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII-IDAHAIGVNSASW 153

>pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD----LLY----H 214
            HK  +  + WSPH++ ++AS   D  + VW +   G  ++ TE   D    LL+    H
Sbjct: 319 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS-TEDAEDGPPELLFIHGGH 377
Query: 215 QRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG 246
             ++    W+P    ++ +   DN + +W + 
Sbjct: 378 TAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409

>pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD----LLY----H 214
            HK  +  + WSPH++ ++AS   D  + VW +   G  ++ TE   D    LL+    H
Sbjct: 321 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS-TEDAEDGPPELLFIHGGH 379
Query: 215 QRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG 246
             ++    W+P    ++ +   DN + +W + 
Sbjct: 380 TAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 411

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 28/151 (18%)
Query: 163 GHKGPVLDIAWSPH-DDNVIASGSEDCVVKVWQIPDGGISRTL---TEPVVDLLYHQRRV 218
           GH G V    WS    DN+I SGS D  +KVW    G    TL   T  V  +  H++RV
Sbjct: 157 GHTGGV----WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRV 212
Query: 219 GLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK 278
                        ++   D  + +W++ TG+ +  +  H   V      +DG ++++   
Sbjct: 213 -------------VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAY 257
Query: 279 DKKMRIINPRTGAIEEEAVCHEGSKATRAIY 309
           D  +++ +P     E E   H     T  +Y
Sbjct: 258 DFMVKVWDP-----ETETCLHTLQGHTNRVY 283

>pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD----LLY----HQ 215
           HK  +  + WSPH++ ++AS   D  + VW +   G  ++ TE   D    LL+    H 
Sbjct: 324 HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS-TEDAEDGPPELLFIHGGHT 382
Query: 216 RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG 246
            ++    W+P    ++ +   DN + +W + 
Sbjct: 383 AKISDFSWNPNEPWIICSVSEDNIMQVWQMA 413

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	490
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.98
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.98
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.97
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.97
3jro_A	753	Fusion protein of protein transport protein SEC13	99.97
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.97
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.97
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.97
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.97
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.97
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.97
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.97
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.97
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.96
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.96
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.96
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.96
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.96
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.95
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.95
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.94
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.93
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.93
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.93
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.93
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.93
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.92
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.92
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.92
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.91
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.91
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.91
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.9
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.9
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.9
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.9
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.89
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.89
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.89
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.89
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.89
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.89
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.89
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.88
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.87
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.87
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.86
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.86
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.86
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.84
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.83
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.83
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.83
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.82
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.8
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.77
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.77
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.76
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.76
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.75
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.75
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.75
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.73
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.73
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.71
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.69
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.69
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.67
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.66
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.66
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.66
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.65
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.65
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.64
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.63
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.63
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.62
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.62
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.61
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.61
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.61
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.6
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.6
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.59
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.58
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.57
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.57
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.54
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.5
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.5
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.49
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.49
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.48
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.48
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.48
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.45
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.43
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.43
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.42
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.41
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.41
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.38
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.37
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.37
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.36
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.34
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.33
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.32
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.32
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.31
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.3
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.29
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.24
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.21
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.21
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.21
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.18
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.17
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.17
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.13
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.1
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.06
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.05
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.03
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.99
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.97
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.93
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.92
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.92
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.91
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.91
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.9
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.86
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.85
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.81
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	98.78
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.76
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.76
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.75
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.74
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.74
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.7
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.69
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.68
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.68
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.65
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.63
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.63
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.63
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.6
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.58
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.57
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.57
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.56
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.55
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.55
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.55
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.52
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.51
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.51
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.48
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.47
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	98.47
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.45
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.39
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	98.38
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.38
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.37
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.37
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.36
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.35
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.34
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.34
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.28
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	98.27
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	98.25
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.22
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.22
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.21
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.15
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.11
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.09
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.08
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.07
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.05
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.04
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.02
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.99
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	97.98
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	97.89
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.85
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	97.85
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.78
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	97.73
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	97.7
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	97.63
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	97.63
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	97.56
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	97.49
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	97.46
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.35
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.35
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.13
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.04
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	97.0
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	96.93
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	96.85
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	96.75
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	96.68
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	96.67
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	96.62
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	96.5
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	96.4
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	96.4
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	96.28
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	96.25
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	96.25
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	96.2
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	96.18
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	96.17
3ott_A	758	Two-component system sensor histidine kinase; beta	95.99
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	95.96
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	95.82
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	95.75
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	95.66
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	95.65
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	95.34
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	94.98
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	94.96
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	94.49
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	94.4
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	94.3
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	94.05
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	93.91
3ott_A	758	Two-component system sensor histidine kinase; beta	93.9
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	93.14
3q6k_A	381	43.2 kDa salivary protein; beta propeller, binding	92.99
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	92.63
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	91.34
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	91.15
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	90.64
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	90.6
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	89.06
4hvt_A	711	Ritya.17583.B, post-proline cleaving enzyme; ssgci	88.09
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	84.59

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=1.3e-48  Score=379.12  Aligned_cols=353  Identities=52%  Similarity=0.973  Sum_probs=312.2

Q ss_pred             CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECC-CCCCEEEEEeCCCcEE
Q psy17682        113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSP-HDDNVIASGSEDCVVK  191 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p-~~~~~l~s~~~dg~i~  191 (490)
                      ...++++|++    ..++++++.+|.|.+|++.    ..++.......+.+|.+.|.+++|+| ++ .+|++|+.||+|+
T Consensus        37 ~~~~~~~~~~----~~~~~~~~~~g~i~v~~~~----~~~~~~~~~~~~~~h~~~V~~~~~~p~~~-~~l~s~s~dg~v~  107 (402)
T 2aq5_A           37 SGFCAVNPKF----MALICEASGGGAFLVLPLG----KTGRVDKNVPLVCGHTAPVLDIAWCPHND-NVIASGSEDCTVM  107 (402)
T ss_dssp             SCSEEECSSE----EEEEBCCSSSCCEEEEETT----CCEECCTTCCCBCCCSSCEEEEEECTTCT-TEEEEEETTSEEE
T ss_pred             CCcEEECCCe----EEEEEEEcCCCEEEEEECc----cCCCCCCCCceEecCCCCEEEEEeCCCCC-CEEEEEeCCCeEE
Confidence            3457777764    5667778999999999997    55555556777889999999999999 55 8999999999999


Q ss_pred             EEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE--ecCCCcEEEEEEcCC
Q psy17682        192 VWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI--ECHPDIVYSASWNWD  269 (490)
Q Consensus       192 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~  269 (490)
                      +||+.+++.......+...+.+|...|.+++|+|+++++|++++.|+.|++||+++++.+..+  ..|...|.+++|+|+
T Consensus       108 vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~  187 (402)
T 2aq5_A          108 VWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRD  187 (402)
T ss_dssp             EEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTT
T ss_pred             EEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCC
Confidence            999998876555555666788899999999999998669999999999999999999999999  789999999999999


Q ss_pred             CCEEEEEeCCCeEEEEeCCCCceeeee-eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC
Q psy17682        270 GSKLLTTCKDKKMRIINPRTGAIEEEA-VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS  348 (490)
Q Consensus       270 ~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~  348 (490)
                      +++|++++.||.|++||+++++.+..+ ..|.+..+..+.|+|++.+|++|.....++.|++||+++...+.......+.
T Consensus       188 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~  267 (402)
T 2aq5_A          188 GALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTS  267 (402)
T ss_dssp             SSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCC
T ss_pred             CCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCC
Confidence            999999999999999999999998888 6777766899999999999999943336999999999987776666666777


Q ss_pred             CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecCCCceE
Q psy17682        349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQ  428 (490)
Q Consensus       349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~~~~~  428 (490)
                      ..+..++|+|++++|+++|+.||.|++||+.++++....+..+.+..++.+++|+|++.+++++++.+++|++.++. ++
T Consensus       268 ~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~~~~~~~l~~~~-~~  346 (402)
T 2aq5_A          268 SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLHERK-CE  346 (402)
T ss_dssp             SSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGTEEEEEEEEETTE-EE
T ss_pred             CceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceecceeEEEEEcCCCc-EE
Confidence            88999999999999977888899999999999987666777777778999999999999999999999999999987 99


Q ss_pred             EEEEEEeCCCcCcccCCCCCCCCCCCccchhhhcCCCCCCCcccCCC
Q psy17682        429 VVSMTVPRKSELFQDDLYPDTVGDTAALTADEWFAGNELFQDDLYPD  475 (490)
Q Consensus       429 ~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  475 (490)
                      ++.+.+||+.+.|+.+++|+.....+.+++++|+.|.++.++.++..
T Consensus       347 ~i~~~~pr~~~~f~~d~~p~~~~~~~~~sa~~w~~g~~~~~~~~s~~  393 (402)
T 2aq5_A          347 PIAMTVPRKSDLFQEDLYPPTAGPDPALTAEEWLGGRDAGPLLISLK  393 (402)
T ss_dssp             EEEEECCCCCSSCCTTTCCCEECSSCSBCHHHHHTTCCCCCCEECCS
T ss_pred             EEEEEcccchhhcccccCCCCCCCCcccCHHHHhCCCCCCceEEecC
Confidence            99999999999999999999999999999999999999988866554

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=8.7e-45  Score=370.70  Aligned_cols=379  Identities=11%  Similarity=0.116  Sum_probs=280.5

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCC--CCC--cccc--ceecccccee
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPP--SEK--SKSA--LKVTKRSNVL   98 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~--~~~--~~~~--~~~~~~~~~~   98 (490)
                      +..++.. .......+.||.+.|++++|+|++ .+||||+.|++|+|||+.++....  ...  ...+  +.+......+
T Consensus        41 v~l~~~~-~~~~~~~~~~h~~~v~~~~~spdg-~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l  118 (611)
T 1nr0_A           41 VYTVPVG-SLTDTEIYTEHSHQTTVAKTSPSG-YYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRI  118 (611)
T ss_dssp             EEEEETT-CSSCCEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEE
T ss_pred             EEEecCC-CcccCeEecCCCCceEEEEECCCC-cEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEE
Confidence            3445543 245667899999999999999999 999999999999999987543110  000  0011  1111111111


Q ss_pred             ecccC-----------------CCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCccee
Q psy17682         99 DKVGG-----------------KGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALV  161 (490)
Q Consensus        99 ~~~~~-----------------~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~  161 (490)
                      ...+.                 ..-..+...+++++|+|+..    ..+++++.++.+++|+..     .+   +....+
T Consensus       119 ~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~----~~l~s~s~D~~v~lwd~~-----~~---~~~~~l  186 (611)
T 1nr0_A          119 AAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRP----FRIISGSDDNTVAIFEGP-----PF---KFKSTF  186 (611)
T ss_dssp             EEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSS----CEEEEEETTSCEEEEETT-----TB---EEEEEE
T ss_pred             EEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCC----eEEEEEeCCCeEEEEECC-----CC---eEeeee
Confidence            10000                 00123445788999999851    247789999999999874     22   245678


Q ss_pred             ecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEE
Q psy17682        162 GGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVA  241 (490)
Q Consensus       162 ~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~  241 (490)
                      .+|.+.|.+++|+|++ .+|++|+.|++|++||+.+++....+........+|...|.+++|+|++. +|++++.|++|+
T Consensus       187 ~~H~~~V~~v~fspdg-~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~  264 (611)
T 1nr0_A          187 GEHTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIK  264 (611)
T ss_dssp             CCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEE
T ss_pred             ccccCceEEEEECCCC-CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEE
Confidence            8999999999999998 89999999999999999988776554221111226999999999999995 999999999999


Q ss_pred             EEECCCCeeEEE-------------------------------------------EecCCCcEEEEEEcCCCCEEEEEeC
Q psy17682        242 IWNVGTGEIMIQ-------------------------------------------IECHPDIVYSASWNWDGSKLLTTCK  278 (490)
Q Consensus       242 iwd~~~~~~~~~-------------------------------------------~~~~~~~v~~~~~~~~~~~l~~~~~  278 (490)
                      +||+++++.+..                                           +.+|...|.+++|+|++++|++++.
T Consensus       265 lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~  344 (611)
T 1nr0_A          265 IWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADA  344 (611)
T ss_dssp             EEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             EEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeC
Confidence            999988765433                                           3468899999999999999999999


Q ss_pred             CCeEEEEeCCCCceeeeee-ec----------------------------------------------------------
Q psy17682        279 DKKMRIINPRTGAIEEEAV-CH----------------------------------------------------------  299 (490)
Q Consensus       279 dg~i~iwd~~~~~~~~~~~-~~----------------------------------------------------------  299 (490)
                      |++|++||+.+++....+. .|                                                          
T Consensus       345 D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~  424 (611)
T 1nr0_A          345 EGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGD  424 (611)
T ss_dssp             TSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSS
T ss_pred             CCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCc
Confidence            9999999998765432210 00                                                          


Q ss_pred             ----------------------CCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeec
Q psy17682        300 ----------------------EGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYD  357 (490)
Q Consensus       300 ----------------------~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s  357 (490)
                                            ....+.+++|+|+|++|++|+   .|+.|++||+..... .......|...|.+++|+
T Consensus       425 ~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs---~D~~v~lwd~~~~~~-~~~~~~~h~~~v~~v~fs  500 (611)
T 1nr0_A          425 IAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGG---QDSKVHVYKLSGASV-SEVKTIVHPAEITSVAFS  500 (611)
T ss_dssp             CEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEE---TTSEEEEEEEETTEE-EEEEEEECSSCEEEEEEC
T ss_pred             EEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeC---CCCeEEEEEccCCce-eeeeccCCCCceEEEEEC
Confidence                                  011257889999999999999   789999999976432 112225677889999999


Q ss_pred             CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCceeEEee--cceeEEEEecCCC
Q psy17682        358 PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSG  425 (490)
Q Consensus       358 ~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~  425 (490)
                      |+|++| ++++.|+.|++|++.++...... ..+. |...|.+++|+||+++++++  ++.+++|++..+.
T Consensus       501 pdg~~l-as~s~d~~v~~w~~~~~~~~~~~-~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~  569 (611)
T 1nr0_A          501 NNGAFL-VATDQSRKVIPYSVANNFELAHT-NSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS  569 (611)
T ss_dssp             TTSSEE-EEEETTSCEEEEEGGGTTEESCC-CCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred             CCCCEE-EEEcCCCCEEEEEcCCCCceeee-eeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcc
Confidence            999998 78999999999999873212111 0123 66789999999999999987  4589999998765

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=1e-43  Score=344.92  Aligned_cols=288  Identities=18%  Similarity=0.260  Sum_probs=250.6

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      ....+.||.+.|++++|+|++ .+|+||+.||+|+|||+.++..                                    
T Consensus       100 ~~~~l~gh~~~V~~~~~~p~~-~~l~s~s~Dg~i~vwd~~~~~~------------------------------------  142 (410)
T 1vyh_C          100 EKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDF------------------------------------  142 (410)
T ss_dssp             CSCEEECCSSCEEEEEECSSS-SEEEEEESSSCEEEEETTTCCC------------------------------------
T ss_pred             ceEeecccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcE------------------------------------
Confidence            356789999999999999999 8999999999999999987541                                    


Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI  195 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~  195 (490)
                                                                ...+.+|.+.|.+++|+|++ .+|++|+.|++|++||+
T Consensus       143 ------------------------------------------~~~l~~h~~~V~~v~~~~~~-~~l~sgs~D~~i~iwd~  179 (410)
T 1vyh_C          143 ------------------------------------------ERTLKGHTDSVQDISFDHSG-KLLASCSADMTIKLWDF  179 (410)
T ss_dssp             ------------------------------------------CEEECCCSSCEEEEEECTTS-SEEEEEETTSCCCEEET
T ss_pred             ------------------------------------------EEEEeccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeC
Confidence                                                      12456899999999999988 89999999999999999


Q ss_pred             CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEE
Q psy17682        196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLT  275 (490)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  275 (490)
                      .+++++..       +.+|...|.+++|+|++. +|++|+.|++|++||+++++++..+.+|...|.++.++|++++|++
T Consensus       180 ~~~~~~~~-------~~~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s  251 (410)
T 1vyh_C          180 QGFECIRT-------MHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS  251 (410)
T ss_dssp             TSSCEEEC-------CCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred             CCCceeEE-------EcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEE
Confidence            88776554       456999999999999985 9999999999999999999999999999999999999999999999


Q ss_pred             EeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC--------------------CcEEEEEeCCCceeEEEEecCCC
Q psy17682        276 TCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS--------------------GLIFTTGFSKMSERQYSLRAPDH  335 (490)
Q Consensus       276 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~--------------------~~~l~~~~~~~~~~~i~iwd~~~  335 (490)
                      ++.|++|++||++++++...+..|... +.+++|+|+                    |.+|++|+   .|+.|++||+++
T Consensus       252 ~s~D~~v~vwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs---~D~~i~iwd~~~  327 (410)
T 1vyh_C          252 CSNDQTVRVWVVATKECKAELREHRHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS---RDKTIKMWDVST  327 (410)
T ss_dssp             EETTSCEEEEETTTCCEEEEECCCSSC-EEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE---TTSEEEEEETTT
T ss_pred             EcCCCeEEEEECCCCceeeEecCCCce-EEEEEEcCcccccchhhhccccccccCCCCCEEEEEe---CCCeEEEEECCC
Confidence            999999999999999999988888875 999999996                    66899998   789999999998


Q ss_pred             CCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--c
Q psy17682        336 LDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--C  413 (490)
Q Consensus       336 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~  413 (490)
                      +.....+  ..|...|.+++|+|+|++| ++|+.|+.|++||+.+++.. ..+.  .|...|++++|+|++.+++++  +
T Consensus       328 ~~~~~~~--~~h~~~v~~v~~~~~g~~l-~s~s~D~~i~vwd~~~~~~~-~~~~--~h~~~v~~l~~~~~~~~l~sgs~D  401 (410)
T 1vyh_C          328 GMCLMTL--VGHDNWVRGVLFHSGGKFI-LSCADDKTLRVWDYKNKRCM-KTLN--AHEHFVTSLDFHKTAPYVVTGSVD  401 (410)
T ss_dssp             TEEEEEE--ECCSSCEEEEEECSSSSCE-EEEETTTEEEEECCTTSCCC-EEEE--CCSSCEEEEEECSSSSCEEEEETT
T ss_pred             CceEEEE--ECCCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCceE-EEEc--CCCCcEEEEEEcCCCCEEEEEeCC
Confidence            6543322  3577789999999999998 78999999999999988733 2222  355789999999999988887  4


Q ss_pred             ceeEEEEe
Q psy17682        414 EIGRFFRL  421 (490)
Q Consensus       414 ~~~~~~~~  421 (490)
                      +.+++|++
T Consensus       402 ~~i~vW~~  409 (410)
T 1vyh_C          402 QTVKVWEC  409 (410)
T ss_dssp             SEEEEEC-
T ss_pred             CcEEEEeC
Confidence            57888875

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=2.8e-43  Score=333.33  Aligned_cols=294  Identities=15%  Similarity=0.195  Sum_probs=248.6

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      .....+|.||.+.|++++|+|++ .+|+||+.||+|++||..++.                                   
T Consensus        45 ~~~~~~l~gH~~~v~~~~~s~d~-~~l~s~s~Dg~v~iWd~~~~~-----------------------------------   88 (340)
T 1got_B           45 MRTRRTLRGHLAKIYAMHWGTDS-RLLLSASQDGKLIIWDSYTTN-----------------------------------   88 (340)
T ss_dssp             CCEEEEECCCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTTCC-----------------------------------
T ss_pred             chhheeecCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCC-----------------------------------
Confidence            45567899999999999999999 899999999999999987643                                   


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                                                                 ....+..|...|.+++|+|++ .+|++|+.|+.|++|
T Consensus        89 -------------------------------------------~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~v~iw  124 (340)
T 1got_B           89 -------------------------------------------KVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIY  124 (340)
T ss_dssp             -------------------------------------------EEEEEECSSSCEEEEEECTTS-SEEEEEETTCEEEEE
T ss_pred             -------------------------------------------cceEeecCCccEEEEEECCCC-CEEEEEeCCCeEEEE
Confidence                                                       011345688899999999988 899999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  273 (490)
                      ++.+.....   .....+.+|...|.++.|++++  .+++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|
T Consensus       125 ~~~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l  199 (340)
T 1got_B          125 NLKTREGNV---RVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF  199 (340)
T ss_dssp             ETTTCSBSC---EEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred             ECccCCCcc---eeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEE
Confidence            998764321   1233467799999999999986  58999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceee
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMF  353 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~  353 (490)
                      ++++.|++|++||++++++...+.+|... +.+++|+|++.+|++|+   .|+.|++||++............+...|.+
T Consensus       200 ~sg~~d~~v~~wd~~~~~~~~~~~~h~~~-v~~v~~~p~~~~l~s~s---~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~  275 (340)
T 1got_B          200 VSGACDASAKLWDVREGMCRQTFTGHESD-INAICFFPNGNAFATGS---DDATCRLFDLRADQELMTYSHDNIICGITS  275 (340)
T ss_dssp             EEEETTSCEEEEETTTCSEEEEECCCSSC-EEEEEECTTSSEEEEEE---TTSCEEEEETTTTEEEEEECCTTCCSCEEE
T ss_pred             EEEeCCCcEEEEECCCCeeEEEEcCCcCC-EEEEEEcCCCCEEEEEc---CCCcEEEEECCCCcEEEEEccCCcccceEE
Confidence            99999999999999999999999888875 99999999999999998   789999999987653222222223346999


Q ss_pred             eeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--ceeEEEE
Q psy17682        354 PLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFR  420 (490)
Q Consensus       354 ~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~  420 (490)
                      ++|+|+|++| ++|+.|+.|++||+.+++.. ..+  ..|..+|.+++|+|++.++++++  +.+++|+
T Consensus       276 ~~~s~~g~~l-~~g~~d~~i~vwd~~~~~~~-~~~--~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          276 VSFSKSGRLL-LAGYDDFNCNVWDALKADRA-GVL--AGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EEECTTSSEE-EEEETTSEEEEEETTTCCEE-EEE--ECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEECCCCCEE-EEECCCCeEEEEEcccCcEe-eEe--ecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence            9999999998 78999999999999988732 222  24567999999999999988874  4778884

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=1.2e-42  Score=323.56  Aligned_cols=291  Identities=16%  Similarity=0.197  Sum_probs=241.9

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      ....+|.+|.+.|++++|+|++ .+|+||+.||+|++||+.++.                                    
T Consensus         4 ~~~~~~~~h~~~V~~~~fsp~~-~~l~s~~~dg~v~lWd~~~~~------------------------------------   46 (304)
T 2ynn_A            4 DIKKTFSNRSDRVKGIDFHPTE-PWVLTTLYSGRVELWNYETQV------------------------------------   46 (304)
T ss_dssp             CCEEEEEEECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTE------------------------------------
T ss_pred             eeEEeecCCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCc------------------------------------
Confidence            4567899999999999999999 899999999999999987643                                    


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                                                                ....+.+|..+|.+++|+|++ ++|++|+.|++|++||
T Consensus        47 ------------------------------------------~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~d~~i~vwd   83 (304)
T 2ynn_A           47 ------------------------------------------EVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFN   83 (304)
T ss_dssp             ------------------------------------------EEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEE
T ss_pred             ------------------------------------------eeEEeeccCCcEEEEEEeCCC-CEEEEECCCCEEEEEE
Confidence                                                      011345788999999999988 8999999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC-eeEEEEecCCCcEEEEEEcC-CCCE
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG-EIMIQIECHPDIVYSASWNW-DGSK  272 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~  272 (490)
                      +.+++.+..       +.+|...|.+++|+|+++ +|++|+.|++|++||++++ .....+.+|...|.+++|+| ++..
T Consensus        84 ~~~~~~~~~-------~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~  155 (304)
T 2ynn_A           84 YNTGEKVVD-------FEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST  155 (304)
T ss_dssp             TTTCCEEEE-------EECCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTE
T ss_pred             CCCCcEEEE-------EeCCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCE
Confidence            998876554       556999999999999985 9999999999999999877 45667889999999999999 6789


Q ss_pred             EEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeC--CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCc
Q psy17682        273 LLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLK--SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNG  350 (490)
Q Consensus       273 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~  350 (490)
                      |++|+.|++|++||++++.....+..+....+..+.|+|  ++.+|++|+   .|+.|++||+++..+...+  ..|...
T Consensus       156 l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s---~D~~i~iWd~~~~~~~~~~--~~h~~~  230 (304)
T 2ynn_A          156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS---DDLTIKIWDYQTKSCVATL--EGHMSN  230 (304)
T ss_dssp             EEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEE---TTSEEEEEETTTTEEEEEE--ECCSSC
T ss_pred             EEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEc---CCCeEEEEeCCCCccceee--CCCCCC
Confidence            999999999999999988877666644434588888886  678999998   7999999999986543322  357788


Q ss_pred             eeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCce--eEEeec-ceeEEEEecC
Q psy17682        351 VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRG--CDVNSC-EIGRFFRLNN  423 (490)
Q Consensus       351 i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~--~l~~~~-~~~~~~~~~~  423 (490)
                      |..++|+|++++| ++|+.||.|++||+.+++    .+..+. +...+.+++|+|++.  +++++. +...+|.+..
T Consensus       231 v~~~~~~p~~~~l-~s~s~Dg~i~iWd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~  302 (304)
T 2ynn_A          231 VSFAVFHPTLPII-ISGSEDGTLKIWNSSTYK----VEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN  302 (304)
T ss_dssp             EEEEEECSSSSEE-EEEETTSCEEEEETTTCC----EEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC-
T ss_pred             EEEEEECCCCCEE-EEEcCCCeEEEEECCCCc----eeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEecc
Confidence            9999999999988 899999999999999987    222333 446899999999874  466664 4556777654

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.7e-43  Score=330.21  Aligned_cols=293  Identities=14%  Similarity=0.179  Sum_probs=247.0

Q ss_pred             CCcEEecccccceeeeEEeccCC---CceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccc
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTA---QNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRN  110 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~---~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (490)
                      ......+.+|.+.|++++|+|++   ..+|+|||.|++|+||++..+..                               
T Consensus        22 g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~-------------------------------   70 (321)
T 3ow8_A           22 GILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERL-------------------------------   70 (321)
T ss_dssp             EEEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEE-------------------------------
T ss_pred             hheeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCe-------------------------------
Confidence            34456688999999999999863   26899999999999999865320                               


Q ss_pred             ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcE
Q psy17682        111 STANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVV  190 (490)
Q Consensus       111 ~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i  190 (490)
                                       .                            ....+.+|...|.+++|+|++ .++++++.|++|
T Consensus        71 -----------------~----------------------------~~~~l~gh~~~v~~~~~~~~~-~~l~s~s~D~~i  104 (321)
T 3ow8_A           71 -----------------D----------------------------LQWSLEGHQLGVVSVDISHTL-PIAASSSLDAHI  104 (321)
T ss_dssp             -----------------E----------------------------EEEEECCCSSCEEEEEECSSS-SEEEEEETTSEE
T ss_pred             -----------------e----------------------------eeeeeccCCCCEEEEEECCCC-CEEEEEeCCCcE
Confidence                             0                            011346899999999999988 899999999999


Q ss_pred             EEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC
Q psy17682        191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG  270 (490)
Q Consensus       191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~  270 (490)
                      ++||+.+++.+..       +..|...+.+++|+|+++ +|++|+.|+.|++||+++++....+..|...|.+++|+|++
T Consensus       105 ~lWd~~~~~~~~~-------~~~~~~~~~~~~~spdg~-~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg  176 (321)
T 3ow8_A          105 RLWDLENGKQIKS-------IDAGPVDAWTLAFSPDSQ-YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG  176 (321)
T ss_dssp             EEEETTTTEEEEE-------EECCTTCCCCEEECTTSS-EEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTS
T ss_pred             EEEECCCCCEEEE-------EeCCCccEEEEEECCCCC-EEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCC
Confidence            9999998876554       345788899999999995 99999999999999999999999999899999999999999


Q ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCc
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNG  350 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~  350 (490)
                      ++|++++.||.|++||+++++.+..+.+|... +.+++|+|++++|++|+   .|+.|++||++.....  .....|...
T Consensus       177 ~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~l~~spd~~~l~s~s---~dg~i~iwd~~~~~~~--~~~~~h~~~  250 (321)
T 3ow8_A          177 KYLASGAIDGIINIFDIATGKLLHTLEGHAMP-IRSLTFSPDSQLLVTAS---DDGYIKIYDVQHANLA--GTLSGHASW  250 (321)
T ss_dssp             SEEEEEETTSCEEEEETTTTEEEEEECCCSSC-CCEEEECTTSCEEEEEC---TTSCEEEEETTTCCEE--EEECCCSSC
T ss_pred             CEEEEEcCCCeEEEEECCCCcEEEEEcccCCc-eeEEEEcCCCCEEEEEc---CCCeEEEEECCCccee--EEEcCCCCc
Confidence            99999999999999999999999999888775 99999999999999998   6899999999876532  223357778


Q ss_pred             eeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--ceeEEEEe
Q psy17682        351 VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFRL  421 (490)
Q Consensus       351 i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~  421 (490)
                      |.+++|+|++++| ++|+.|+.|++||+.+++.+. .+  ..+...|.+++|+|++.++++++  +.+++|+.
T Consensus       251 v~~~~~sp~~~~l-~s~s~D~~v~iwd~~~~~~~~-~~--~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~  319 (321)
T 3ow8_A          251 VLNVAFCPDDTHF-VSSSSDKSVKVWDVGTRTCVH-TF--FDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC  319 (321)
T ss_dssp             EEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEE-EE--CCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred             eEEEEECCCCCEE-EEEeCCCcEEEEeCCCCEEEE-EE--cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence            9999999999998 789999999999999886322 22  24567899999999999888774  47888885

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=7.6e-43  Score=356.35  Aligned_cols=339  Identities=12%  Similarity=0.154  Sum_probs=263.5

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      ....+.+|.+.|++++|+|+++..|+||+.|++|++||...++                  ....+.     .+...|.+
T Consensus       139 ~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~------------------~~~~l~-----~H~~~V~~  195 (611)
T 1nr0_A          139 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK------------------FKSTFG-----EHTKFVHS  195 (611)
T ss_dssp             BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE------------------EEEEEC-----CCSSCEEE
T ss_pred             CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe------------------Eeeeec-----cccCceEE
Confidence            4456899999999999999986679999999999999976532                  111111     13446899


Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCccee-------ecccCCeeEEEECCCCCCEEEEEeCCC
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALV-------GGHKGPVLDIAWSPHDDNVIASGSEDC  188 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~-------~~h~~~V~~~~~~p~~~~~l~s~~~dg  188 (490)
                      ++|+|+.     ..+++++.|+.+++|+..     .++   ....+       .+|.+.|.+++|+|++ .+|++++.|+
T Consensus       196 v~fspdg-----~~las~s~D~~i~lwd~~-----~g~---~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~s~s~D~  261 (611)
T 1nr0_A          196 VRYNPDG-----SLFASTGGDGTIVLYNGV-----DGT---KTGVFEDDSLKNVAHSGSVFGLTWSPDG-TKIASASADK  261 (611)
T ss_dssp             EEECTTS-----SEEEEEETTSCEEEEETT-----TCC---EEEECBCTTSSSCSSSSCEEEEEECTTS-SEEEEEETTS
T ss_pred             EEECCCC-----CEEEEEECCCcEEEEECC-----CCc---EeeeeccccccccccCCCEEEEEECCCC-CEEEEEeCCC
Confidence            9999985     367889999999999975     121   12222       2899999999999998 8999999999


Q ss_pred             cEEEEECCCCCccccccc------------------------------------ceeeecccccCEEEEEEeeCCCCEEE
Q psy17682        189 VVKVWQIPDGGISRTLTE------------------------------------PVVDLLYHQRRVGLVLWHPTAQNVLL  232 (490)
Q Consensus       189 ~i~iwd~~~~~~~~~~~~------------------------------------~~~~~~~~~~~v~~~~~~p~~~~~l~  232 (490)
                      +|++||+.+++....+..                                    +...+.+|...|++++|+|+++ +|+
T Consensus       262 ~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~-~l~  340 (611)
T 1nr0_A          262 TIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK-TLF  340 (611)
T ss_dssp             EEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEE
T ss_pred             eEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC-EEE
Confidence            999999998776544321                                    2234568999999999999995 999


Q ss_pred             EEeCCCcEEEEECCCCeeEEEE-e--------------------------------------------------------
Q psy17682        233 TAGSDNNVAIWNVGTGEIMIQI-E--------------------------------------------------------  255 (490)
Q Consensus       233 s~~~dg~v~iwd~~~~~~~~~~-~--------------------------------------------------------  255 (490)
                      +++.|+.|++||+.+++....+ .                                                        
T Consensus       341 s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s  420 (611)
T 1nr0_A          341 SADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVS  420 (611)
T ss_dssp             EEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEEC
T ss_pred             EEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEe
Confidence            9999999999998765432211 0                                                        


Q ss_pred             -------------------------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--eeeeeecCCCceeEEE
Q psy17682        256 -------------------------CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI--EEEAVCHEGSKATRAI  308 (490)
Q Consensus       256 -------------------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~  308 (490)
                                               .|...+.+++|+|+|++|++|+.|++|++||+.++..  ... ..|... +.+++
T Consensus       421 ~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~-v~~v~  498 (611)
T 1nr0_A          421 ADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAE-ITSVA  498 (611)
T ss_dssp             TTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSC-EEEEE
T ss_pred             CCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCc-eEEEE
Confidence                                     1234578899999999999999999999999987653  233 466664 99999


Q ss_pred             EeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec-cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCee-E
Q psy17682        309 YLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFV-H  386 (490)
Q Consensus       309 ~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~-~  386 (490)
                      |+|+|++|++++   .|+.|++|++.+.......... .|...|.+++|+|||++| ++|+.|++|++|++.+++... .
T Consensus       499 fspdg~~las~s---~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~l-asgs~D~~v~lW~~~~~~~~~~~  574 (611)
T 1nr0_A          499 FSNNGAFLVATD---QSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRL-ATGSLDNSVIVWNMNKPSDHPII  574 (611)
T ss_dssp             ECTTSSEEEEEE---TTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTCTTSCCEE
T ss_pred             ECCCCCEEEEEc---CCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEE-EEEECCCcEEEEECCCcccccch
Confidence            999999999998   7899999999862221111112 377889999999999998 899999999999998865322 2


Q ss_pred             EeeeeeC-CCceeeEEEeeCceeEEee--cceeEEEEe
Q psy17682        387 YINTFQT-PDPQRGIGMMPKRGCDVNS--CEIGRFFRL  421 (490)
Q Consensus       387 ~~~~~~~-~~~i~~~~~sp~~~~l~~~--~~~~~~~~~  421 (490)
                      .+  ..| ...|.+++|+|++. ++++  ++.+++|++
T Consensus       575 ~~--~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~  609 (611)
T 1nr0_A          575 IK--GAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNV  609 (611)
T ss_dssp             ET--TSSTTSCEEEEEEEETTE-EEEEETTSCEEEEEC
T ss_pred             hh--ccCcccCeeEEEEcCCCE-EEEecCCCCEEEEec
Confidence            22  234 47899999999999 6655  458899987

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=2.5e-42  Score=328.48  Aligned_cols=297  Identities=16%  Similarity=0.199  Sum_probs=247.8

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      ......|.||.+.|++++|+|++ .+|+|||.||+|++||..++..                                  
T Consensus        54 ~~~~~~l~gH~~~V~~~~~s~d~-~~l~s~s~Dg~v~vWd~~~~~~----------------------------------   98 (354)
T 2pbi_B           54 MKTRRTLKGHGNKVLCMDWCKDK-RRIVSSSQDGKVIVWDSFTTNK----------------------------------   98 (354)
T ss_dssp             CCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCE----------------------------------
T ss_pred             cEEEEEecCCCCeEEEEEECCCC-CEEEEEeCCCeEEEEECCCCCc----------------------------------
Confidence            35677899999999999999999 8999999999999999876430                                  


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                                                                  ...+..|...|.+++|+|++ .++++|+.|+.+++|
T Consensus        99 --------------------------------------------~~~~~~~~~~v~~~~~sp~g-~~lasg~~d~~i~v~  133 (354)
T 2pbi_B           99 --------------------------------------------EHAVTMPCTWVMACAYAPSG-CAIACGGLDNKCSVY  133 (354)
T ss_dssp             --------------------------------------------EEEEECSSSCCCEEEECTTS-SEEEEESTTSEEEEE
T ss_pred             --------------------------------------------ceEEecCCCCEEEEEECCCC-CEEEEeeCCCCEEEE
Confidence                                                        01234577889999999998 899999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC--CCC
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW--DGS  271 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~~  271 (490)
                      ++........ ......+.+|...|.+++|+|++. .|++++.|++|++||+++++.+..+.+|...|.+++|+|  +++
T Consensus       134 ~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~-~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~  211 (354)
T 2pbi_B          134 PLTFDKNENM-AAKKKSVAMHTNYLSACSFTNSDM-QILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN  211 (354)
T ss_dssp             ECCCCTTCCS-GGGCEEEEECSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCC
T ss_pred             EEeccccccc-cccceeeeccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCC
Confidence            9875432211 123345667999999999999985 899999999999999999999999999999999999988  568


Q ss_pred             EEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCce
Q psy17682        272 KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGV  351 (490)
Q Consensus       272 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i  351 (490)
                      +|++++.||+|++||+++++++..+..|... +.+++|+|++.+|++|+   .|+.|++||++............+...+
T Consensus       212 ~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~-v~~v~~~p~~~~l~s~s---~D~~v~lwd~~~~~~~~~~~~~~~~~~~  287 (354)
T 2pbi_B          212 TFVSGGCDKKAMVWDMRSGQCVQAFETHESD-VNSVRYYPSGDAFASGS---DDATCRLYDLRADREVAIYSKESIIFGA  287 (354)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEEEEE---TTSCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred             EEEEEeCCCeEEEEECCCCcEEEEecCCCCC-eEEEEEeCCCCEEEEEe---CCCeEEEEECCCCcEEEEEcCCCcccce
Confidence            9999999999999999999999999888875 99999999999999998   6899999999876432222222233468


Q ss_pred             eeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--ceeEEEE
Q psy17682        352 MFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFR  420 (490)
Q Consensus       352 ~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~  420 (490)
                      .+++|+|++++| ++|+.|+.|++||+.+++.+ ..+  ..|...|.+++|+|++.++++++  +.+++|+
T Consensus       288 ~~~~~s~~g~~l-~~g~~d~~i~vwd~~~~~~~-~~l--~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          288 SSVDFSLSGRLL-FAGYNDYTINVWDVLKGSRV-SIL--FGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             EEEEECTTSSEE-EEEETTSCEEEEETTTCSEE-EEE--CCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred             eEEEEeCCCCEE-EEEECCCcEEEEECCCCceE-EEE--ECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence            899999999998 78999999999999988732 222  24667999999999999998884  4677773

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=2.1e-43  Score=333.58  Aligned_cols=304  Identities=12%  Similarity=0.139  Sum_probs=236.7

Q ss_pred             cccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEec
Q psy17682         40 LLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITIS  119 (490)
Q Consensus        40 l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  119 (490)
                      ...|...|.+++|+|+| .+|++++ |+++++||.....+......      .......      ........|.+++|+
T Consensus        26 ~~~~~~~v~~~~fs~dG-~~l~~~s-d~~~r~Wd~~~~~~~~~~~~------~~~~~~~------~~~~~~~~v~~~~~s   91 (344)
T 4gqb_B           26 PACMERQLEAARYRSDG-ALLLGAS-SLSGRCWAGSLWLFKDPCAA------PNEGFCS------AGVQTEAGVADLTWV   91 (344)
T ss_dssp             CSSCCSEEEEEEECTTS-CEEEEEE-CCSSSCCCEEEEEESSGGGT------TCGGGCS------EEEEESSCEEEEEEE
T ss_pred             cccccCCEEEEEECCCC-CEEEEEe-CCceEEeeceeeeecccccc------CCcceee------eeeccCCCEEEEEEe
Confidence            35688889999999999 7888777 78889987432110000000      0000000      001123358899999


Q ss_pred             cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682        120 EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG  199 (490)
Q Consensus       120 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~  199 (490)
                      |+.      .+++++.+|.|++|++.    ...........+.+|.+.|++++|+|+| ++|++|+.|++|++||+++++
T Consensus        92 ~d~------~l~~~s~dg~v~lWd~~----~~~~~~~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~~  160 (344)
T 4gqb_B           92 GER------GILVASDSGAVELWELD----ENETLIVSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQV  160 (344)
T ss_dssp             TTT------EEEEEETTSEEEEEEEC----TTSSCEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE
T ss_pred             CCC------eEEEEECCCEEEEEecc----CCCceeEeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCc
Confidence            984      46688999999999985    2211111223456899999999999998 899999999999999999886


Q ss_pred             cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe--cCCCcEEEEEEcCC-CCEEEEE
Q psy17682        200 ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE--CHPDIVYSASWNWD-GSKLLTT  276 (490)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~  276 (490)
                      .+..       +.+|...|.+++|+|++..+|++++.|++|++||+++++....+.  .+...+.+++|+|+ +++|++|
T Consensus       161 ~~~~-------~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg  233 (344)
T 4gqb_B          161 VLSS-------YRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFG  233 (344)
T ss_dssp             EEEE-------ECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEE
T ss_pred             EEEE-------EcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEe
Confidence            6554       557999999999999987789999999999999999999888774  45667999999995 5688999


Q ss_pred             eCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCC-cEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeee
Q psy17682        277 CKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG-LIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPL  355 (490)
Q Consensus       277 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~  355 (490)
                      +.||+|++||+++++++.++.+|... +.+++|+|++ ++|++|+   .|+.|++||+.+++   ......|...|.+++
T Consensus       234 ~~dg~v~~wd~~~~~~~~~~~~h~~~-v~~v~fsp~g~~~lasgs---~D~~i~vwd~~~~~---~~~~~~H~~~V~~v~  306 (344)
T 4gqb_B          234 DENGTVSLVDTKSTSCVLSSAVHSQC-VTGLVFSPHSVPFLASLS---EDCSLAVLDSSLSE---LFRSQAHRDFVRDAT  306 (344)
T ss_dssp             ETTSEEEEEESCC--CCEEEECCSSC-EEEEEECSSSSCCEEEEE---TTSCEEEECTTCCE---EEEECCCSSCEEEEE
T ss_pred             ccCCcEEEEECCCCcEEEEEcCCCCC-EEEEEEccCCCeEEEEEe---CCCeEEEEECCCCc---EEEEcCCCCCEEEEE
Confidence            99999999999999999999999876 9999999997 5788888   68999999998764   334457888899999


Q ss_pred             ecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        356 YDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       356 ~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      |+|+++.++++|+.|++|++|++.+..
T Consensus       307 ~sp~~~~llas~s~D~~v~~w~v~~~~  333 (344)
T 4gqb_B          307 WSPLNHSLLTTVGWDHQVVHHVVPTEP  333 (344)
T ss_dssp             ECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred             EeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence            999999877899999999999998753

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=7.7e-43  Score=335.48  Aligned_cols=312  Identities=16%  Similarity=0.188  Sum_probs=254.8

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      ....+|.||.+.|++++|+|++ .+|+||+.|++|+|||+.++..                  ...+.     .+...+.
T Consensus        57 ~~~~~l~gH~~~V~~~~~sp~~-~~l~s~s~D~~v~iWd~~~~~~------------------~~~~~-----~h~~~v~  112 (380)
T 3iz6_a           57 VCCRTLQGHSGKVYSLDWTPEK-NWIVSASQDGRLIVWNALTSQK------------------THAIK-----LHCPWVM  112 (380)
T ss_dssp             EEEEEECCCSSCEEEEEECTTS-SCEEEEETTSEEEEEETTTTEE------------------EEEEE-----CCCTTCC
T ss_pred             EEeecccccccEEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcc------------------ceEEe-----cCCCCEE
Confidence            4567799999999999999999 8999999999999999987541                  11111     1233588


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                      +++|+|+.     ..+++++.++.+++|++.......+. ......+.+|.+.|.++.|+|+++..|++|+.|++|++||
T Consensus       113 ~~~~s~~g-----~~las~~~d~~v~iw~~~~~~~~~~~-~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd  186 (380)
T 3iz6_a          113 ECAFAPNG-----QSVACGGLDSACSIFNLSSQADRDGN-MPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWD  186 (380)
T ss_dssp             CCEECTTS-----SEEEECCSSSCCEEEECCCCSSCCCS-STTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEEC
T ss_pred             EEEECCCC-----CEEEEeeCCCcEEEEECCCCccccCC-ccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEE
Confidence            99999995     46788999999999998633222221 2345567899999999999998767899999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC-CCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG-TGEIMIQIECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l  273 (490)
                      +.+++.+..+...  ...+|...|.+++|++.+.++|++|+.|+.|++||++ .++.+..+.+|...|.+++|+|++++|
T Consensus       187 ~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l  264 (380)
T 3iz6_a          187 VTTGQRISIFGSE--FPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRF  264 (380)
T ss_dssp             TTTCCEEEEECCC--SSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEE
T ss_pred             cCCCcEEEEeecc--cCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeE
Confidence            9998876544211  1246899999999988444699999999999999998 457788899999999999999999999


Q ss_pred             EEEeCCCeEEEEeCCCCceeeeeeecCC------CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe--c
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEAVCHEG------SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE--L  345 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~--~  345 (490)
                      ++++.||+|++||+++++.+..+..+..      ..+.+++|+|+|++|++|+   .++.|++||....+.......  .
T Consensus       265 ~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~---~dg~i~vwd~~~~~~~~~~~~~~~  341 (380)
T 3iz6_a          265 GTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGY---SNGDCYVWDTLLAEMVLNLGTLQN  341 (380)
T ss_dssp             EEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC---TTSCEEEEETTTCCEEEEECCSCS
T ss_pred             EEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEE---CCCCEEEEECCCCceEEEEecccC
Confidence            9999999999999999988877764322      2378999999999999998   689999999987664333321  3


Q ss_pred             cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        346 DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       346 ~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      .|...|.+++|+|+|++| ++|+.|+.|++|++...+
T Consensus       342 ~h~~~v~~l~~s~dg~~l-~sgs~D~~i~iW~~~~~~  377 (380)
T 3iz6_a          342 SHEGRISCLGLSSDGSAL-CTGSWDKNLKIWAFSGHR  377 (380)
T ss_dssp             SCCCCCCEEEECSSSSEE-EEECTTSCEEEEECCSSS
T ss_pred             CCCCceEEEEECCCCCEE-EEeeCCCCEEEEecCCCc
Confidence            577789999999999998 899999999999998765

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=3.2e-42  Score=322.97  Aligned_cols=298  Identities=15%  Similarity=0.179  Sum_probs=244.4

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      ....+|.||.+.|++++|+|.+..+|+|||.|++|++|++.....                 .                 
T Consensus         8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~-----------------~-----------------   53 (319)
T 3frx_A            8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ-----------------K-----------------   53 (319)
T ss_dssp             EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT-----------------E-----------------
T ss_pred             EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc-----------------c-----------------
Confidence            345679999999999999998778999999999999999864220                 0                 


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                                                             .......+.+|...|.+++|+|++ .+|++|+.|++|++||
T Consensus        54 ---------------------------------------~~~~~~~~~~h~~~v~~~~~s~dg-~~l~s~s~D~~v~~wd   93 (319)
T 3frx_A           54 ---------------------------------------FGVPVRSFKGHSHIVQDCTLTADG-AYALSASWDKTLRLWD   93 (319)
T ss_dssp             ---------------------------------------EEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEE
T ss_pred             ---------------------------------------ccccceEEeCCcccEEEEEECCCC-CEEEEEeCCCEEEEEE
Confidence                                                   000123567999999999999998 8999999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCC-----
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWD-----  269 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-----  269 (490)
                      +.+++....       +.+|...|.+++|+|++. +|++|+.|++|++||++ ++.+..+.+|...|.+++|+|.     
T Consensus        94 ~~~~~~~~~-------~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~  164 (319)
T 3frx_A           94 VATGETYQR-------FVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADD  164 (319)
T ss_dssp             TTTTEEEEE-------EECCSSCEEEEEECTTSC-EEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC-----
T ss_pred             CCCCCeeEE-------EccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCC
Confidence            998866544       556999999999999985 99999999999999996 5677788899999999999985     


Q ss_pred             -CCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC
Q psy17682        270 -GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS  348 (490)
Q Consensus       270 -~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~  348 (490)
                       +..+++++.|+.|++||+++.+....+.+|... +.+++|+|+|++|++|+   .|+.|++||+.+.+.   .....+.
T Consensus       165 ~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~-v~~~~~sp~g~~l~s~~---~dg~i~iwd~~~~~~---~~~~~~~  237 (319)
T 3frx_A          165 DSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSN-INTLTASPDGTLIASAG---KDGEIMLWNLAAKKA---MYTLSAQ  237 (319)
T ss_dssp             -CCEEEEEETTSCEEEEETTTTEEEEEECCCCSC-EEEEEECTTSSEEEEEE---TTCEEEEEETTTTEE---EEEEECC
T ss_pred             CccEEEEEeCCCEEEEEECCcchhheeecCCCCc-EEEEEEcCCCCEEEEEe---CCCeEEEEECCCCcE---EEEecCC
Confidence             448999999999999999999988888888875 99999999999999998   789999999997653   3333455


Q ss_pred             CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee-----eCCCceeeEEEeeCceeEEee--cceeEEEEe
Q psy17682        349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF-----QTPDPQRGIGMMPKRGCDVNS--CEIGRFFRL  421 (490)
Q Consensus       349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~  421 (490)
                      ..+.+++|+|++.++ ++++ ++.+++|++............+     .+...+.+++|+|+|++++++  ++.+++|++
T Consensus       238 ~~v~~~~~sp~~~~l-a~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~  315 (319)
T 3frx_A          238 DEVFSLAFSPNRYWL-AAAT-ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQV  315 (319)
T ss_dssp             SCEEEEEECSSSSEE-EEEE-TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred             CcEEEEEEcCCCCEE-EEEc-CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEE
Confidence            789999999999998 5555 4559999998764221111111     123568999999999999887  457899998


Q ss_pred             cCC
Q psy17682        422 NNS  424 (490)
Q Consensus       422 ~~~  424 (490)
                      .+.
T Consensus       316 ~t~  318 (319)
T 3frx_A          316 MTA  318 (319)
T ss_dssp             EEC
T ss_pred             eec
Confidence            764

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=1.9e-42  Score=329.54  Aligned_cols=301  Identities=15%  Similarity=0.200  Sum_probs=233.9

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeC------CCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcc
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGK------EAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANR  109 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~------D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (490)
                      |.....+|.+.|++++|+|+| .+|+|||.      |+.|++|+..++.....             .....      ...
T Consensus        34 p~~~p~~H~~~V~~v~fSpDG-~~las~s~d~~~~wd~~v~~~~~~~~~~~~~-------------~~~~~------~~~   93 (357)
T 4g56_B           34 PVTAPACMEVQIGAVRYRRDG-ALLLAASSLSSRTWGGSIWVFKDPEGAPNES-------------LCTAG------VQT   93 (357)
T ss_dssp             ------CCCSEEEEEEECSSS-CEEEEEECSSSSSCCEEEEEESSCC---CGG-------------GCSEE------EEC
T ss_pred             CCCCcccccCCEEEEEECCCC-CEEEEEcCCCCccccCeEEEEECCCCCccee-------------Eeccc------CCC
Confidence            344557899999999999999 89999998      67899998877542110             00000      112


Q ss_pred             cccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCc
Q psy17682        110 NSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCV  189 (490)
Q Consensus       110 ~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~  189 (490)
                      ...|.+++|+|+.      .+++++.+|.|++|++.    .............+|.+.|.+++|+|++ ++|++|+.|++
T Consensus        94 ~~~V~~~~~s~d~------~~l~~s~dg~v~lWd~~----~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~  162 (357)
T 4g56_B           94 EAGVTDVAWVSEK------GILVASDSGAVELWEIL----EKESLLVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFS  162 (357)
T ss_dssp             SSCEEEEEEETTT------EEEEEETTSCEEEC------------CCCCEEECCCSSCEEEEEECSSS-SEEEEEETTSC
T ss_pred             CCCEEEEEEcCCC------CEEEEECCCEEEEeecc----ccceeEEEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCe
Confidence            3358899999985      34457789999999985    2222222223456899999999999998 89999999999


Q ss_pred             EEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe--cCCCcEEEEEEc
Q psy17682        190 VKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE--CHPDIVYSASWN  267 (490)
Q Consensus       190 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~  267 (490)
                      |++||+++++.+..       +.+|...|++++|+|+++.++++++.|+.|++||+++++++..+.  .+...+.+++|+
T Consensus       163 v~iwd~~~~~~~~~-------~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~s  235 (357)
T 4g56_B          163 VKVWDLSQKAVLKS-------YNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWH  235 (357)
T ss_dssp             EEEEETTTTEEEEE-------ECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEEC
T ss_pred             EEEEECCCCcEEEE-------EcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhh
Confidence            99999988866554       456999999999999987789999999999999999988766554  567789999999


Q ss_pred             CCC-CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCC-cEEEEEeCCCceeEEEEecCCCCCCCeEEEec
Q psy17682        268 WDG-SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG-LIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL  345 (490)
Q Consensus       268 ~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~  345 (490)
                      |++ .+|++|+.|+.|++||+++++++..+..|... +.+++|+|++ ++|++|+   .|+.|+|||+++++   .....
T Consensus       236 p~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~-v~~l~~sp~~~~~lasgs---~D~~i~iwd~~~~~---~~~~~  308 (357)
T 4g56_B          236 PEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQN-ITGLAYSYHSSPFLASIS---EDCTVAVLDADFSE---VFRDL  308 (357)
T ss_dssp             TTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSC-EEEEEECSSSSCCEEEEE---TTSCEEEECTTSCE---EEEEC
T ss_pred             hcccceEEEeecccceeEEECCCCcEeEEEecccee-EEEEEEcCCCCCEEEEEe---CCCEEEEEECCCCc---EeEEC
Confidence            974 68899999999999999999999999888875 9999999997 5788888   68999999998764   34455


Q ss_pred             cCCCceeeeeecC-CCCeEEEEecCCCeEEEEEecCCC
Q psy17682        346 DTSNGVMFPLYDP-DTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       346 ~~~~~i~~~~~s~-~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      .|...|.+++|+| ++++| ++++.||.|++|++....
T Consensus       309 ~H~~~V~~vafsP~d~~~l-~s~s~Dg~v~iW~~~~~~  345 (357)
T 4g56_B          309 SHRDFVTGVAWSPLDHSKF-TTVGWDHKVLHHHLPSEG  345 (357)
T ss_dssp             CCSSCEEEEEECSSSTTEE-EEEETTSCEEEEECC---
T ss_pred             CCCCCEEEEEEeCCCCCEE-EEEcCCCeEEEEECCCCC
Confidence            7888999999999 67777 899999999999997654

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=5.2e-41  Score=313.96  Aligned_cols=292  Identities=18%  Similarity=0.310  Sum_probs=242.8

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      ..+..++.||.+.|++++|+|++ .+|++|+.||.|++|++.++..                                  
T Consensus        13 ~~~~~~~~gh~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~~~~----------------------------------   57 (312)
T 4ery_A           13 YALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKF----------------------------------   57 (312)
T ss_dssp             CEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCE----------------------------------
T ss_pred             ceeEEEEcccCCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCCccc----------------------------------
Confidence            45567899999999999999999 8999999999999999876430                                  


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                                                                  ...+.+|...|.+++|+|++ ++|++|+.|+.|++|
T Consensus        58 --------------------------------------------~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~vw   92 (312)
T 4ery_A           58 --------------------------------------------EKTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIW   92 (312)
T ss_dssp             --------------------------------------------EEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEE
T ss_pred             --------------------------------------------chhhccCCCceEEEEEcCCC-CEEEEECCCCEEEEE
Confidence                                                        11345789999999999988 899999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  273 (490)
                      |+++++.+..       +.+|...|.+++|+|++. +|++|+.|+.|++||+++++.+..+..|...|.+++|+|++++|
T Consensus        93 d~~~~~~~~~-------~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  164 (312)
T 4ery_A           93 DVSSGKCLKT-------LKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLI  164 (312)
T ss_dssp             ETTTCCEEEE-------EECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred             ECCCCcEEEE-------EcCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEE
Confidence            9998876554       456999999999999985 99999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCc--e
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNG--V  351 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~--i  351 (490)
                      ++++.||.|++||+++++.+..+..+....+..++|+|++++|++++   .++.|++||+++.+......  .+...  .
T Consensus       165 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~--~~~~~~~~  239 (312)
T 4ery_A          165 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT---LDNTLKLWDYSKGKCLKTYT--GHKNEKYC  239 (312)
T ss_dssp             EEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE---TTTEEEEEETTTTEEEEEEC--SSCCSSSC
T ss_pred             EEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc---CCCeEEEEECCCCcEEEEEE--ecCCceEE
Confidence            99999999999999999888877655555699999999999999998   68999999998765332222  23222  2


Q ss_pred             eeeeec-CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee----cceeEEEEec
Q psy17682        352 MFPLYD-PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS----CEIGRFFRLN  422 (490)
Q Consensus       352 ~~~~~s-~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~----~~~~~~~~~~  422 (490)
                      ....++ +++++| ++|+.||.|++||+.+++. ...+.  .+...|.+++|+|++.+++++    ++.+++|+.+
T Consensus       240 ~~~~~~~~~~~~l-~sg~~dg~i~vwd~~~~~~-~~~~~--~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d  311 (312)
T 4ery_A          240 IFANFSVTGGKWI-VSGSEDNLVYIWNLQTKEI-VQKLQ--GHTDVVISTACHPTENIIASAALENDKTIKLWKSD  311 (312)
T ss_dssp             CCEEEECSSSCEE-EECCTTSCEEEEETTTCCE-EEEEC--CCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred             EEEEEEeCCCcEE-EEECCCCEEEEEECCCchh-hhhhh--ccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence            233444 566666 8999999999999998872 22222  355789999999999988876    4578999864

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.7e-41  Score=321.71  Aligned_cols=303  Identities=17%  Similarity=0.239  Sum_probs=240.8

Q ss_pred             CcEEecccccc-eeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         35 EPVVDLLYHQR-RVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        35 ~~~~~l~gH~~-~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      ..+..+.+|.+ .|.+++|+|++ .+|+|||.|++|+|||+.++..                  ..              
T Consensus         6 ~~~~~~~~h~~~~v~~l~~sp~g-~~las~~~D~~i~iw~~~~~~~------------------~~--------------   52 (345)
T 3fm0_A            6 VLLGRVPAHPDSRCWFLAWNPAG-TLLASCGGDRRIRIWGTEGDSW------------------IC--------------   52 (345)
T ss_dssp             EEEEEECCSTTSCEEEEEECTTS-SCEEEEETTSCEEEEEEETTEE------------------EE--------------
T ss_pred             EEeeeecCCCCCcEEEEEECCCC-CEEEEEcCCCeEEEEEcCCCcc------------------ee--------------
Confidence            45678899998 99999999999 8999999999999999875320                  00              


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                                                                 ......+|.+.|.+++|+|++ ++|++|+.|++|++|
T Consensus        53 -------------------------------------------~~~~~~~h~~~v~~~~~sp~g-~~l~s~s~D~~v~iw   88 (345)
T 3fm0_A           53 -------------------------------------------KSVLSEGHQRTVRKVAWSPCG-NYLASASFDATTCIW   88 (345)
T ss_dssp             -------------------------------------------EEEECSSCSSCEEEEEECTTS-SEEEEEETTSCEEEE
T ss_pred             -------------------------------------------eeeeccccCCcEEEEEECCCC-CEEEEEECCCcEEEE
Confidence                                                       000124799999999999998 899999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe---eEEEEecCCCcEEEEEEcCCC
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE---IMIQIECHPDIVYSASWNWDG  270 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~  270 (490)
                      ++..+...     ....+.+|...|.+++|+|++. +|++|+.|+.|++||+++++   .+..+.+|...|.+++|+|++
T Consensus        89 ~~~~~~~~-----~~~~~~~h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~  162 (345)
T 3fm0_A           89 KKNQDDFE-----CVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ  162 (345)
T ss_dssp             EECCC-EE-----EEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSS
T ss_pred             EccCCCeE-----EEEEccCCCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCC
Confidence            98766421     2334677999999999999985 99999999999999998763   456677899999999999999


Q ss_pred             CEEEEEeCCCeEEEEeCCCCc--eeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe--------
Q psy17682        271 SKLLTTCKDKKMRIINPRTGA--IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI--------  340 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~--------  340 (490)
                      ++|++++.|++|++||.++++  +..++.+|... +.+++|+|+|++|++|+   .|+.|++|+........        
T Consensus       163 ~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~-v~~l~~sp~g~~l~s~s---~D~~v~iW~~~~~~~~~~~~~~~~~  238 (345)
T 3fm0_A          163 ELLASASYDDTVKLYREEEDDWVCCATLEGHEST-VWSLAFDPSGQRLASCS---DDRTVRIWRQYLPGNEQGVACSGSD  238 (345)
T ss_dssp             SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSC-EEEEEECTTSSEEEEEE---TTSCEEEEEEECTTCTTCCCCC---
T ss_pred             CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCc-eEEEEECCCCCEEEEEe---CCCeEEEeccccCCCCccceeeccC
Confidence            999999999999999998875  34567788775 99999999999999998   78999999964322110        


Q ss_pred             ----EE--EeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC----eeEEee-e-eeCCCceeeEEEeeCce-
Q psy17682        341 ----VM--VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP----FVHYIN-T-FQTPDPQRGIGMMPKRG-  407 (490)
Q Consensus       341 ----~~--~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~----~~~~~~-~-~~~~~~i~~~~~sp~~~-  407 (490)
                          ..  ....|...|.+++|+|++..| ++++.|+.|++|+......    ...... . ..|...|++++|+|++. 
T Consensus       239 ~~~~~~~~~~~~h~~~v~~v~~~~~~~~l-~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~  317 (345)
T 3fm0_A          239 PSWKCICTLSGFHSRTIYDIAWCQLTGAL-ATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPG  317 (345)
T ss_dssp             CEEEEEEEECSSCSSCEEEEEECTTTCCE-EEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTT
T ss_pred             CccceeEEecCCCCCcEEEEEEecCCCEE-EEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCce
Confidence                11  111266779999999999998 7899999999999976531    111111 1 13567899999999974 


Q ss_pred             eEEee--cceeEEEEecCCC
Q psy17682        408 CDVNS--CEIGRFFRLNNSG  425 (490)
Q Consensus       408 ~l~~~--~~~~~~~~~~~~~  425 (490)
                      +++++  ++.+++|++...+
T Consensus       318 ~laS~s~Dg~v~~W~~~~~~  337 (345)
T 3fm0_A          318 LLASCSDDGEVAFWKYQRPE  337 (345)
T ss_dssp             EEEEEETTSCEEEEEECC--
T ss_pred             EEEEcCCCCcEEEEEecCCC
Confidence            77766  5589999998876

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=1.8e-40  Score=314.57  Aligned_cols=299  Identities=17%  Similarity=0.197  Sum_probs=237.2

Q ss_pred             CcEEecccccceeeeEEe-----cc-CCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCc
Q psy17682         35 EPVVDLLYHQRRVGLVLW-----HP-TAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGAN  108 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~-----~p-~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (490)
                      .....|.||.+.|++++|     +| ++ .+|+|||.|++|++||+..+....                           
T Consensus        12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~-~~l~sgs~D~~v~iWd~~~~~~~~---------------------------   63 (343)
T 2xzm_R           12 VKRGILEGHSDWVTSIVAGFSQKENEDS-PVLISGSRDKTVMIWKLYEEEQNG---------------------------   63 (343)
T ss_dssp             EEEEEEECCSSCEEEEEECCCSSTTCCC-CEEEEEETTSCEEEEEECSSCCSS---------------------------
T ss_pred             eeeeeeccchhhhhheeeEEEeecCCCC-CEEEEEcCCCEEEEEECCcCCccc---------------------------
Confidence            345679999999999999     77 55 899999999999999987643100                           


Q ss_pred             ccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC
Q psy17682        109 RNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC  188 (490)
Q Consensus       109 ~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg  188 (490)
                                                                  ........+.+|...|.+++|+|++ .++++|+.|+
T Consensus        64 --------------------------------------------~~~~~~~~l~~h~~~V~~~~~~~~~-~~l~s~s~D~   98 (343)
T 2xzm_R           64 --------------------------------------------YFGIPHKALTGHNHFVSDLALSQEN-CFAISSSWDK   98 (343)
T ss_dssp             --------------------------------------------BSEEEEEEECCCSSCEEEEEECSST-TEEEEEETTS
T ss_pred             --------------------------------------------ccccccchhccCCCceEEEEECCCC-CEEEEEcCCC
Confidence                                                        0000122457899999999999988 8999999999


Q ss_pred             cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe---cCCCcEEEEE
Q psy17682        189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE---CHPDIVYSAS  265 (490)
Q Consensus       189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---~~~~~v~~~~  265 (490)
                      +|++||+++++....       +.+|...|.+++|+|++. +|++++.|+.|++||+... ......   .|...|.+++
T Consensus        99 ~v~lwd~~~~~~~~~-------~~~h~~~v~~v~~sp~~~-~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~  169 (343)
T 2xzm_R           99 TLRLWDLRTGTTYKR-------FVGHQSEVYSVAFSPDNR-QILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVR  169 (343)
T ss_dssp             EEEEEETTSSCEEEE-------EECCCSCEEEEEECSSTT-EEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEE
T ss_pred             cEEEEECCCCcEEEE-------EcCCCCcEEEEEECCCCC-EEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeee
Confidence            999999998876554       556999999999999995 9999999999999999743 333333   6888999999


Q ss_pred             EcCCC----------CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCC
Q psy17682        266 WNWDG----------SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDH  335 (490)
Q Consensus       266 ~~~~~----------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~  335 (490)
                      |+|++          .+|++++.|++|++||. ..+....+..|... +.+++|+|+|++|++|+   .|+.|++||+..
T Consensus       170 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~-v~~~~~s~~g~~l~sgs---~dg~v~iwd~~~  244 (343)
T 2xzm_R          170 YSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESN-VNHLSISPNGKYIATGG---KDKKLLIWDILN  244 (343)
T ss_dssp             ECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSC-EEEEEECTTSSEEEEEE---TTCEEEEEESSC
T ss_pred             eccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCcccc-ceEEEECCCCCEEEEEc---CCCeEEEEECCC
Confidence            99987          78999999999999994 45666777788775 99999999999999998   799999999965


Q ss_pred             CCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeE-Eeee---------eeCCCceeeEEEeeC
Q psy17682        336 LDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVH-YINT---------FQTPDPQRGIGMMPK  405 (490)
Q Consensus       336 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~-~~~~---------~~~~~~i~~~~~sp~  405 (490)
                      ...+....  .+...|.+++|+|+++++ ++| .|+.|++|++.+++.... .+..         ..+...+.+++|+|+
T Consensus       245 ~~~~~~~~--~~~~~v~~v~~sp~~~~l-a~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~  320 (343)
T 2xzm_R          245 LTYPQREF--DAGSTINQIAFNPKLQWV-AVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNAL  320 (343)
T ss_dssp             CSSCSEEE--ECSSCEEEEEECSSSCEE-EEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSS
T ss_pred             Ccccceee--cCCCcEEEEEECCCCCEE-EEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCC
Confidence            44433332  234569999999999877 544 588899999988653221 1110         134467999999999


Q ss_pred             ceeEEee--cceeEEEEecCC
Q psy17682        406 RGCDVNS--CEIGRFFRLNNS  424 (490)
Q Consensus       406 ~~~l~~~--~~~~~~~~~~~~  424 (490)
                      +.+++++  ++.+++|++.++
T Consensus       321 g~~l~sg~~Dg~v~~w~~~~g  341 (343)
T 2xzm_R          321 GKKLFAGFTDGVIRTFSFETS  341 (343)
T ss_dssp             SCCEEEEETTSEEEEEEEEEE
T ss_pred             CCeEEEecCCceEEEEEEEcc
Confidence            9998887  458899998653

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-40  Score=312.95  Aligned_cols=303  Identities=17%  Similarity=0.211  Sum_probs=226.5

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      ..+..|.+|.+.|.+++|+|+   +|+||+.|++|++||+..+...                .                 
T Consensus         5 ~~~~~~~~h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~~----------------~-----------------   48 (330)
T 2hes_X            5 NLIKSLKLYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDFT----------------L-----------------   48 (330)
T ss_dssp             EEEEEEECCSSCEEEEEEETT---EEEEEESSSCEEEEECSSSCCE----------------E-----------------
T ss_pred             ccceeeccCCCceeeeccCCC---EEEEEcCCCEEEEEEecCCCeE----------------E-----------------
Confidence            356789999999999999985   8999999999999998763200                0                 


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                                              +..+.                 ..+|.+.|.+++|+|++ .+|++|+.|++|++|+
T Consensus        49 ------------------------~~~~~-----------------~~~h~~~v~~v~~sp~~-~~las~s~D~~v~iw~   86 (330)
T 2hes_X           49 ------------------------IDVLD-----------------ETAHKKAIRSVAWRPHT-SLLAAGSFDSTVSIWA   86 (330)
T ss_dssp             ------------------------EEEEC-----------------TTCCCSCEEEEEECTTS-SEEEEEETTSCEEEEE
T ss_pred             ------------------------EEEEe-----------------cCCccCCEEEEEECCCC-CEEEEEeCCCcEEEEE
Confidence                                    00000                 01499999999999998 8999999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC----CeeEEEEecCCCcEEEEEEcCCC
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT----GEIMIQIECHPDIVYSASWNWDG  270 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~  270 (490)
                      +........-..+...+.+|...|.+++|+|++. +|++|+.|++|++||++.    .+.+..+.+|...|.+++|+|++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~  165 (330)
T 2hes_X           87 KEESADRTFEMDLLAIIEGHENEVKGVAWSNDGY-YLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSE  165 (330)
T ss_dssp             C-------CCCEEEEEEC----CEEEEEECTTSC-EEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSS
T ss_pred             cccCcCccccceeEEEEcCCCCcEEEEEECCCCC-EEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCC
Confidence            8643211001123345778999999999999985 999999999999999953    25677788999999999999999


Q ss_pred             CEEEEEeCCCeEEEEeCCCC--ceeeeeeecCCCceeEEEEeCC--CcEEEEEeCCCceeEEEEecCCCCCCC-----eE
Q psy17682        271 SKLLTTCKDKKMRIINPRTG--AIEEEAVCHEGSKATRAIYLKS--GLIFTTGFSKMSERQYSLRAPDHLDEP-----IV  341 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~s~~--~~~l~~~~~~~~~~~i~iwd~~~~~~~-----~~  341 (490)
                      ++|++++.|++|++||.+++  +++..+.+|... +.+++|+|+  +.+|++|+   .|+.|++||+......     ..
T Consensus       166 ~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~l~s~s---~D~~v~iw~~~~~~~~~~~~~~~  241 (330)
T 2hes_X          166 ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGT-VWSSDFDKTEGVFRLCSGS---DDSTVRVWKYMGDDEDDQQEWVC  241 (330)
T ss_dssp             SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC-EEEEEECCSSSSCEEEEEE---TTSCEEEEEEEEECTTSCEEEEE
T ss_pred             CEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCc-EEEEEecCCCCeeEEEEEe---CCCeEEEEEecCCCccccceeEE
Confidence            99999999999999999876  567778888875 999999999  77899998   6899999998754211     11


Q ss_pred             EEec--cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee-eeCCC-ceeeEEEee--CceeEEee--c
Q psy17682        342 MVEL--DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT-FQTPD-PQRGIGMMP--KRGCDVNS--C  413 (490)
Q Consensus       342 ~~~~--~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~-~~~~~-~i~~~~~sp--~~~~l~~~--~  413 (490)
                      ....  .|...|.+++|++++ +| ++++.||.|++|+..+++.. ..... ..+.. .|.+++|+|  ++.+++++  +
T Consensus       242 ~~~~~~~h~~~v~~v~~s~~~-~l-~s~~~dg~v~iw~~~~~~~~-~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~D  318 (330)
T 2hes_X          242 EAILPDVHKRQVYNVAWGFNG-LI-ASVGADGVLAVYEEVDGEWK-VFAKRALCHGVYEINVVKWLELNGKTILATGGDD  318 (330)
T ss_dssp             EEECCSCCSSCEEEEEECTTS-CE-EEEETTSCEEEEEEETTEEE-EEEEESCTTTTSCEEEEEEC-----CCEEEEETT
T ss_pred             eeecccccccceEEEEEcCCC-EE-EEEeCCCEEEEEEcCCCceE-EEeccccccccceEEEEEEecCCCceEEEEecCC
Confidence            1122  266789999999765 55 78899999999999876411 11111 23444 799999999  67888876  4


Q ss_pred             ceeEEEEecC
Q psy17682        414 EIGRFFRLNN  423 (490)
Q Consensus       414 ~~~~~~~~~~  423 (490)
                      +.+++|++..
T Consensus       319 g~v~~W~~~~  328 (330)
T 2hes_X          319 GIVNFWSLEK  328 (330)
T ss_dssp             SEEEEEEC--
T ss_pred             CcEEEEEecc
Confidence            5889999764

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=9.3e-40  Score=332.01  Aligned_cols=330  Identities=17%  Similarity=0.304  Sum_probs=268.9

Q ss_pred             eeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCC
Q psy17682         26 TYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKG  105 (490)
Q Consensus        26 ~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (490)
                      ..|+.  ..+.+..+.+|...|++++|+|++ ..|++++.|++|++|+.....                   ...+.   
T Consensus       246 ~~w~~--~~~~~~~~~~~~~~v~~v~~~~d~-~~l~~~~~d~~i~~w~~~~~~-------------------~~~~~---  300 (577)
T 2ymu_A          246 KLWNR--NGQLLQTLTGHSSSVNGVAFRPDG-QTIASASDDKTVKLWNRNGQL-------------------LQTLT---  300 (577)
T ss_dssp             EEECT--TSCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSCE-------------------EEEEC---
T ss_pred             EEEeC--CCCEEEEEecCCCCEEEEEEcCCC-CEEEEEeCCCEEEEEeCCCcE-------------------EEEEe---
Confidence            34543  345677899999999999999999 899999999999999965421                   11111   


Q ss_pred             CCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe
Q psy17682        106 GANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS  185 (490)
Q Consensus       106 ~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~  185 (490)
                        .+...+.+++++|+.     ..+++++.++.+++|+..         ......+.+|...|.+++|+|++ .+|++++
T Consensus       301 --~h~~~v~~~~~~~~~-----~~l~t~~~d~~i~~w~~~---------~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~  363 (577)
T 2ymu_A          301 --GHSSSVWGVAFSPDG-----QTIASASDDKTVKLWNRN---------GQHLQTLTGHSSSVWGVAFSPDG-QTIASAS  363 (577)
T ss_dssp             --CCSSCEEEEEECTTS-----SEEEEEETTSCEEEEETT---------SCEEEEECCCSSCEEEEEECTTS-SEEEEEE
T ss_pred             --cCCCCeEEEEECCCC-----CEEEEEeCCCeEEEEeCC---------CCeeEEEeCCCCCEEEEEECCCC-CEEEEEe
Confidence              123367889999985     356778899999999975         22345678999999999999998 8999999


Q ss_pred             CCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEE
Q psy17682        186 EDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSAS  265 (490)
Q Consensus       186 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~  265 (490)
                      .||.|++|+. +++.+.       .+.+|...|.+++|+|+++ +|++++.|+.|++||. +++.+..+.+|...|++++
T Consensus       364 ~dg~v~~~~~-~~~~~~-------~~~~~~~~v~~~~~s~dg~-~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~  433 (577)
T 2ymu_A          364 DDKTVKLWNR-NGQLLQ-------TLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVA  433 (577)
T ss_dssp             TTSEEEEEET-TCCEEE-------EEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEE
T ss_pred             CCCEEEEEcC-CCCEEE-------EecCCCCCeEEEEECCCCC-EEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEE
Confidence            9999999995 444433       3556999999999999995 8999999999999995 6778888999999999999


Q ss_pred             EcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec
Q psy17682        266 WNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL  345 (490)
Q Consensus       266 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~  345 (490)
                      |+|++++|++++.|++|++||. +++.+..+.+|... +.+++|+|++++|++++   .|+.|++||... +..  ....
T Consensus       434 ~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~-v~~~~~spd~~~las~~---~d~~i~iw~~~~-~~~--~~~~  505 (577)
T 2ymu_A          434 FSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS-VRGVAFSPDGQTIASAS---DDKTVKLWNRNG-QLL--QTLT  505 (577)
T ss_dssp             ECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSC-EEEEEECTTSCEEEEEE---TTSEEEEEETTS-CEE--EEEE
T ss_pred             ECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCC-EEEEEEcCCCCEEEEEe---CCCEEEEEcCCC-CEE--EEEe
Confidence            9999999999999999999996 46777888888775 99999999999999998   689999999643 322  2223


Q ss_pred             cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--ceeEEEE
Q psy17682        346 DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFR  420 (490)
Q Consensus       346 ~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~  420 (490)
                      .|...|.+++|+|+|++| ++++.||.|++||. +++ ....+  ..|..+|++++|+||++++++++  +.+++|+
T Consensus       506 ~h~~~v~~l~~s~dg~~l-~s~~~dg~v~lwd~-~~~-~~~~~--~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd  577 (577)
T 2ymu_A          506 GHSSSVRGVAFSPDGQTI-ASASDDKTVKLWNR-NGQ-LLQTL--TGHSSSVWGVAFSPDGQTIASASSDKTVKLWN  577 (577)
T ss_dssp             CCSSCEEEEEECTTSSCE-EEEETTSEEEEECT-TSC-EEEEE--ECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             CCCCCEEEEEEcCCCCEE-EEEECcCEEEEEeC-CCC-EEEEE--cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence            577889999999999998 78999999999996 444 22222  24567999999999999988874  4678885

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.6e-41  Score=327.29  Aligned_cols=341  Identities=14%  Similarity=0.166  Sum_probs=269.1

Q ss_pred             ccceeeeEEeccCCCceEEee----------eCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682         43 HQRRVGLVLWHPTAQNVLLTA----------GKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST  112 (490)
Q Consensus        43 H~~~V~~v~~~p~~~~~l~s~----------~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (490)
                      |...|.+++|+|++..+|++|          +.|+.|++||+.++....               ....      ......
T Consensus        11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~---------------~~~~------~~~~~~   69 (416)
T 2pm9_A           11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEK---------------PIAS------LQVDSK   69 (416)
T ss_dssp             EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCS---------------CSCC------CCCSSC
T ss_pred             hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCc---------------EEEE------EecCCc
Confidence            557899999999996699999          899999999998754110               0001      112346


Q ss_pred             CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEE
Q psy17682        113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKV  192 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~i  192 (490)
                      +.+++|+|+.     ..+++++.+|.+++|++.    ...........+.+|.+.|.+++|+|+++.+|++++.||.|++
T Consensus        70 v~~~~~s~~~-----~~l~~~~~dg~v~vw~~~----~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~i  140 (416)
T 2pm9_A           70 FNDLDWSHNN-----KIIAGALDNGSLELYSTN----EANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFI  140 (416)
T ss_dssp             EEEEEECSSS-----SCEEEEESSSCEEEECCS----STTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEB
T ss_pred             eEEEEECCCC-----CeEEEEccCCeEEEeecc----cccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEE
Confidence            8899999985     356778889999999996    2111123566778999999999999984589999999999999


Q ss_pred             EECCCCC------cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecC------CCc
Q psy17682        193 WQIPDGG------ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH------PDI  260 (490)
Q Consensus       193 wd~~~~~------~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~------~~~  260 (490)
                      ||+.+++      ....+    .....|...|.+++|+|++..+|++++.|+.|++||+++++.+..+..+      ...
T Consensus       141 wd~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~  216 (416)
T 2pm9_A          141 WDMNKCTESPSNYTPLTP----GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQ  216 (416)
T ss_dssp             CBTTTTSSCTTTCCCBCC----CCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCC
T ss_pred             EECCCCcccccccccccc----ccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCc
Confidence            9998876      22221    1245689999999999995569999999999999999999999888866      788


Q ss_pred             EEEEEEcCCC-CEEEEEeCCC---eEEEEeCCCC-ceeeeee-ecCCCceeEEEEeC-CCcEEEEEeCCCceeEEEEecC
Q psy17682        261 VYSASWNWDG-SKLLTTCKDK---KMRIINPRTG-AIEEEAV-CHEGSKATRAIYLK-SGLIFTTGFSKMSERQYSLRAP  333 (490)
Q Consensus       261 v~~~~~~~~~-~~l~~~~~dg---~i~iwd~~~~-~~~~~~~-~~~~~~~~~~~~s~-~~~~l~~~~~~~~~~~i~iwd~  333 (490)
                      |.+++|+|++ .++++++.|+   .|++||++++ .+...+. .|... +.+++|+| ++.+|++++   .|+.|++||+
T Consensus       217 v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~~l~s~~---~dg~v~~wd~  292 (416)
T 2pm9_A          217 LSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKG-ILSLDWCHQDEHLLLSSG---RDNTVLLWNP  292 (416)
T ss_dssp             EEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSC-EEEEEECSSCSSCEEEEE---SSSEEEEECS
T ss_pred             eEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCc-eeEEEeCCCCCCeEEEEe---CCCCEEEeeC
Confidence            9999999997 6899999998   9999999986 5667776 67765 99999999 899999998   6899999999


Q ss_pred             CCCCCCeEEEeccCCCceeeeeecCCC-CeEEEEecCCCeEEEEEecCCCCeeEEee--------------e--------
Q psy17682        334 DHLDEPIVMVELDTSNGVMFPLYDPDT-NLVYLCGKGDSVIRYFEITAEPPFVHYIN--------------T--------  390 (490)
Q Consensus       334 ~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~g~~dg~i~iwd~~~~~~~~~~~~--------------~--------  390 (490)
                      ++.+....+  ..|...|.+++|+|++ ++| ++++.|+.|++|++.+.+.......              .        
T Consensus       293 ~~~~~~~~~--~~~~~~v~~~~~s~~~~~~l-~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (416)
T 2pm9_A          293 ESAEQLSQF--PARGNWCFKTKFAPEAPDLF-ACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKE  369 (416)
T ss_dssp             SSCCEEEEE--ECSSSCCCCEEECTTCTTEE-EECCSSSEEEEEESCCCCCSSCC----------------------CCS
T ss_pred             CCCccceee--cCCCCceEEEEECCCCCCEE-EEEecCCcEEEEEccCCCCCcccccccccccCCccccccccccccccc
Confidence            986543222  2566789999999999 555 8999999999999987653211100              0        


Q ss_pred             ---------e-eCCCceeeEEEeeCceeEEeec--ceeEEEEecCC
Q psy17682        391 ---------F-QTPDPQRGIGMMPKRGCDVNSC--EIGRFFRLNNS  424 (490)
Q Consensus       391 ---------~-~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~~~  424 (490)
                               . .+..++.+++|+|+|+++++++  +.+++|++.+.
T Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~  415 (416)
T 2pm9_A          370 KPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS  415 (416)
T ss_dssp             CCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred             ccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence                     0 0345778999999999999885  47889988764

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=7.2e-39  Score=325.46  Aligned_cols=326  Identities=18%  Similarity=0.300  Sum_probs=268.0

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      .+.+..+.+|...|.+++|+|++ .+|++++.|+.|++||.....                   ...+..     +...+
T Consensus       211 ~~~~~~~~~~~~~v~~~~~s~dg-~~l~~~~~d~~i~~w~~~~~~-------------------~~~~~~-----~~~~v  265 (577)
T 2ymu_A          211 GQLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRNGQL-------------------LQTLTG-----HSSSV  265 (577)
T ss_dssp             SCEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCE-------------------EEEECC-----CSSCE
T ss_pred             CcEEEEEecCCCCEEEEEECCCC-CEEEEEeCCCEEEEEeCCCCE-------------------EEEEec-----CCCCE
Confidence            45677899999999999999999 899999999999999864311                   111111     23367


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                      .+++|+|+.     ..+++++.++.+++|+..         ......+.+|.+.|.+++|+|++ .++++++.|++|++|
T Consensus       266 ~~v~~~~d~-----~~l~~~~~d~~i~~w~~~---------~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~~~d~~i~~w  330 (577)
T 2ymu_A          266 NGVAFRPDG-----QTIASASDDKTVKLWNRN---------GQLLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLW  330 (577)
T ss_dssp             EEEEECTTS-----SEEEEEETTSCEEEEETT---------SCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEE
T ss_pred             EEEEEcCCC-----CEEEEEeCCCEEEEEeCC---------CcEEEEEecCCCCeEEEEECCCC-CEEEEEeCCCeEEEE
Confidence            889999985     357778899999999864         22455778999999999999988 899999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  273 (490)
                      |+.... ..       .+.+|...|.+++|+|++. ++++++.|+.|++||. +++.+..+.+|...|.+++|+|++++|
T Consensus       331 ~~~~~~-~~-------~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l  400 (577)
T 2ymu_A          331 NRNGQH-LQ-------TLTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTI  400 (577)
T ss_dssp             ETTSCE-EE-------EECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCE
T ss_pred             eCCCCe-eE-------EEeCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEE
Confidence            975432 22       2556999999999999995 9999999999999995 677888899999999999999999999


Q ss_pred             EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceee
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMF  353 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~  353 (490)
                      ++++.|+.|++||. +++.+..+..|... +.+++|+|++++|++++   .|+.|++||... +.  ......|...|.+
T Consensus       401 ~~~~~d~~v~~~~~-~~~~~~~~~~~~~~-v~~~~~s~d~~~l~~~~---~d~~v~~w~~~~-~~--~~~~~~~~~~v~~  472 (577)
T 2ymu_A          401 ASASDDKTVKLWNR-NGQLLQTLTGHSSS-VWGVAFSPDDQTIASAS---DDKTVKLWNRNG-QL--LQTLTGHSSSVRG  472 (577)
T ss_dssp             EEEETTSEEEEECT-TCCEEEEEECCSSC-EEEEEECTTSSEEEEEE---TTSEEEEEETTS-CE--EEEEECCSSCEEE
T ss_pred             EEEeCCCEEEEEeC-CCCEEEEecCCCCC-eEEEEECCCCCEEEEEc---CCCEEEEEECCC-CE--EEEEcCCCCCEEE
Confidence            99999999999995 56778888888775 99999999999999998   689999999753 22  2233367788999


Q ss_pred             eeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--ceeEEEEec
Q psy17682        354 PLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFRLN  422 (490)
Q Consensus       354 ~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~  422 (490)
                      ++|+|++++| ++++.|+.|++||. +++ ....+.  .+...|++++|+|+++++++++  +.+++|+..
T Consensus       473 ~~~spd~~~l-as~~~d~~i~iw~~-~~~-~~~~~~--~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~  538 (577)
T 2ymu_A          473 VAFSPDGQTI-ASASDDKTVKLWNR-NGQ-LLQTLT--GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN  538 (577)
T ss_dssp             EEECTTSCEE-EEEETTSEEEEEET-TSC-EEEEEE--CCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred             EEEcCCCCEE-EEEeCCCEEEEEcC-CCC-EEEEEe--CCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence            9999999998 78999999999995 444 222222  3557899999999999998874  478999864

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=6.5e-40  Score=312.02  Aligned_cols=293  Identities=13%  Similarity=0.117  Sum_probs=226.3

Q ss_pred             ccccCCeeEeccccccceEEEEEeeCC------CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEE
Q psy17682        109 RNSTANEITISEDYVKEFKEEIRKLKS------QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIA  182 (490)
Q Consensus       109 ~~~~v~~~~~s~~~~~~~~~~~~~~~~------~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~  182 (490)
                      +...|++++||||+     ..+++++.      ++.+.+|+..    .............+|...|.+++|+|++  .++
T Consensus        41 H~~~V~~v~fSpDG-----~~las~s~d~~~~wd~~v~~~~~~----~~~~~~~~~~~~~~~~~~V~~~~~s~d~--~~l  109 (357)
T 4g56_B           41 MEVQIGAVRYRRDG-----ALLLAASSLSSRTWGGSIWVFKDP----EGAPNESLCTAGVQTEAGVTDVAWVSEK--GIL  109 (357)
T ss_dssp             CCSEEEEEEECSSS-----CEEEEEECSSSSSCCEEEEEESSC----C---CGGGCSEEEECSSCEEEEEEETTT--EEE
T ss_pred             ccCCEEEEEECCCC-----CEEEEEcCCCCccccCeEEEEECC----CCCcceeEecccCCCCCCEEEEEEcCCC--CEE
Confidence            34468999999996     24555554      7889999875    2222222234456899999999999976  466


Q ss_pred             EEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEE
Q psy17682        183 SGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVY  262 (490)
Q Consensus       183 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~  262 (490)
                      +++.||+|+|||+.+++......   ....+|...|++++|+|++. +|++|+.|+.|++||+++++.+..+.+|...|.
T Consensus       110 ~~s~dg~v~lWd~~~~~~~~~~~---~~~~~h~~~V~~v~~spdg~-~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~  185 (357)
T 4g56_B          110 VASDSGAVELWEILEKESLLVNK---FAKYEHDDIVKTLSVFSDGT-QAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVN  185 (357)
T ss_dssp             EEETTSCEEEC--------CCCC---EEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred             EEECCCEEEEeeccccceeEEEe---eccCCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEE
Confidence            78899999999998886544322   23456999999999999995 999999999999999999999999999999999


Q ss_pred             EEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeeeeeec-CCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCC
Q psy17682        263 SASWNWDGS-KLLTTCKDKKMRIINPRTGAIEEEAVCH-EGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEP  339 (490)
Q Consensus       263 ~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~  339 (490)
                      +++|+|++. ++++++.|++|++||++++++...+..+ ....+.+++|+|+ +.+|++|+   .++.|++||+++.+..
T Consensus       186 ~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~---~d~~i~~wd~~~~~~~  262 (357)
T 4g56_B          186 CVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGD---ETGNVSLVNIKNPDSA  262 (357)
T ss_dssp             EEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE---SSSCEEEEESSCGGGC
T ss_pred             EEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEee---cccceeEEECCCCcEe
Confidence            999999875 7899999999999999998877665532 2334899999998 56888888   6899999999987654


Q ss_pred             eEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee-CceeEEee--ccee
Q psy17682        340 IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP-KRGCDVNS--CEIG  416 (490)
Q Consensus       340 ~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~--~~~~  416 (490)
                      ..+  ..+...|.+++|+|++..++++|+.|++|+|||+.+++    .+..+.|...|++++|+| ++.+++++  ++.+
T Consensus       263 ~~~--~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~----~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v  336 (357)
T 4g56_B          263 QTS--AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE----VFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKV  336 (357)
T ss_dssp             EEE--CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE----EEEECCCSSCEEEEEECSSSTTEEEEEETTSCE
T ss_pred             EEE--eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc----EeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeE
Confidence            433  35667899999999986544899999999999999876    344456778999999999 78888776  4688


Q ss_pred             EEEEecCCC
Q psy17682        417 RFFRLNNSG  425 (490)
Q Consensus       417 ~~~~~~~~~  425 (490)
                      ++|++....
T Consensus       337 ~iW~~~~~~  345 (357)
T 4g56_B          337 LHHHLPSEG  345 (357)
T ss_dssp             EEEECC---
T ss_pred             EEEECCCCC
Confidence            999987654

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=3.8e-39  Score=304.85  Aligned_cols=302  Identities=16%  Similarity=0.157  Sum_probs=242.9

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      ...+|.||.+.|++|+|+|++.++|+|||.|++|+|||+........             .....+.     .+...|.+
T Consensus        30 l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~-------------~~~~~l~-----~h~~~V~~   91 (340)
T 4aow_A           30 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYG-------------IPQRALR-----GHSHFVSD   91 (340)
T ss_dssp             EEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSE-------------EEEEEEC-----CCSSCEEE
T ss_pred             EEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc-------------eeeEEEe-----CCCCCEEE
Confidence            34579999999999999998768999999999999999987542110             0011111     12346889


Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI  195 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~  195 (490)
                      ++|+|+.     ..+++++.++.+++|+..    .    .........+...+..+.+++++ .+|++|+.|+.+++||+
T Consensus        92 ~~~s~dg-----~~l~s~~~d~~i~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~s~d~~~~~~d~  157 (340)
T 4aow_A           92 VVISSDG-----QFALSGSWDGTLRLWDLT----T----GTTTRRFVGHTKDVLSVAFSSDN-RQIVSGSRDKTIKLWNT  157 (340)
T ss_dssp             EEECTTS-----SEEEEEETTSEEEEEETT----T----TEEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECT
T ss_pred             EEECCCC-----CEEEEEcccccceEEeec----c----cceeeeecCCCCceeEEEEeecC-ccceeecCCCeEEEEEe
Confidence            9999985     367789999999999985    1    12334556788899999999988 89999999999999998


Q ss_pred             CCCCcccccccceeeecccccCEEEEEEeeCCC-CEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEE
Q psy17682        196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQ-NVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLL  274 (490)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  274 (490)
                      .......      ....+|...+..++|++++. .++++++.|+.|++||+++++.+..+.+|...|++++|+|++++|+
T Consensus       158 ~~~~~~~------~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~  231 (340)
T 4aow_A          158 LGVCKYT------VQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCA  231 (340)
T ss_dssp             TSCEEEE------ECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred             CCCceEE------EEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEE
Confidence            6543322      22456899999999998753 3678999999999999999999999999999999999999999999


Q ss_pred             EEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE-------EeccC
Q psy17682        275 TTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM-------VELDT  347 (490)
Q Consensus       275 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~-------~~~~~  347 (490)
                      +++.||.|++||+++.+.+..+..+.  .+..+.|+|++.+++++.    ++.|++||++........       ....|
T Consensus       232 s~s~Dg~i~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h  305 (340)
T 4aow_A          232 SGGKDGQAMLWDLNEGKHLYTLDGGD--IINALCFSPNRYWLCAAT----GPSIKIWDLEGKIIVDELKQEVISTSSKAE  305 (340)
T ss_dssp             EEETTCEEEEEETTTTEEEEEEECSS--CEEEEEECSSSSEEEEEE----TTEEEEEETTTTEEEEEECCC-------CC
T ss_pred             EEeCCCeEEEEEeccCceeeeecCCc--eEEeeecCCCCceeeccC----CCEEEEEECCCCeEEEeccccceeeeccCC
Confidence            99999999999999999888887554  499999999998887774    889999999865322111       12246


Q ss_pred             CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        348 SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       348 ~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      ...|.+++|+|+|++| ++|+.||.|+|||+.+|+
T Consensus       306 ~~~v~~l~~s~dg~~l-~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          306 PPQCTSLAWSADGQTL-FAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             CCCEEEEEECTTSSEE-EEEETTSCEEEEEEEC--
T ss_pred             CCCEEEEEECCCCCEE-EEEeCCCEEEEEeCCCcC
Confidence            6779999999999998 789999999999999885

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.1e-39  Score=314.84  Aligned_cols=348  Identities=12%  Similarity=0.126  Sum_probs=265.2

Q ss_pred             CcEEeccc--ccceeeeEEeccCCCceEEeeeCCCeEEEEeC----CCCCCCCCCCccccceeccccceeecccC-CCCC
Q psy17682         35 EPVVDLLY--HQRRVGLVLWHPTAQNVLLTAGKEAEPILISL----KDGYIPPSEKSKSALKVTKRSNVLDKVGG-KGGA  107 (490)
Q Consensus        35 ~~~~~l~g--H~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  107 (490)
                      .....+..  |.+.|++++|+|++..+|++|+.||.|++|++    .++...        ............... ....
T Consensus        34 ~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~  105 (425)
T 1r5m_A           34 GFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKY--------WKLTIIAELRHPFALSASSG  105 (425)
T ss_dssp             CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------C--------EEEEEEEEEECCCCCC----
T ss_pred             hhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccc--------cccccccccccccccccccc
Confidence            33444444  55999999999999439999999999999999    665410        000000000000000 0011


Q ss_pred             cccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCC
Q psy17682        108 NRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSED  187 (490)
Q Consensus       108 ~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~d  187 (490)
                      .....+.+++|+|+.     ..+++++.+|.+.+|+..         ......+.+|...|.+++|+|++ .+|++++.|
T Consensus       106 ~~~~~v~~~~~s~~~-----~~l~~~~~dg~i~i~~~~---------~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d  170 (425)
T 1r5m_A          106 KTTNQVTCLAWSHDG-----NSIVTGVENGELRLWNKT---------GALLNVLNFHRAPIVSVKWNKDG-THIISMDVE  170 (425)
T ss_dssp             --CBCEEEEEECTTS-----SEEEEEETTSCEEEEETT---------SCEEEEECCCCSCEEEEEECTTS-SEEEEEETT
T ss_pred             CCCCceEEEEEcCCC-----CEEEEEeCCCeEEEEeCC---------CCeeeeccCCCccEEEEEECCCC-CEEEEEecC
Confidence            134478999999985     367778899999999843         23455778999999999999988 899999999


Q ss_pred             CcEEEEECCCCCcccccccceeeecccccC---------------EEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEE
Q psy17682        188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRR---------------VGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMI  252 (490)
Q Consensus       188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---------------v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~  252 (490)
                      |.|++||+.+++....+..       +...               +.++.|+|++  .+++++.|+.|++||+++++.+.
T Consensus       171 ~~i~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~~~~  241 (425)
T 1r5m_A          171 NVTILWNVISGTVMQHFEL-------KETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKTPTG  241 (425)
T ss_dssp             CCEEEEETTTTEEEEEECC-------C---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSSCSE
T ss_pred             CeEEEEECCCCcEEEEeec-------cccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCceee
Confidence            9999999988876655432       4443               8999999985  68999999999999999999999


Q ss_pred             EEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEec
Q psy17682        253 QIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRA  332 (490)
Q Consensus       253 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd  332 (490)
                      .+..|...|.+++|+|++++|++++.|+.|++||+++++....+..|... +.++.|+|++ ++++++   .++.|++||
T Consensus       242 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~-~l~~~~---~d~~i~i~d  316 (425)
T 1r5m_A          242 KLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQS-IVSASWVGDD-KVISCS---MDGSVRLWS  316 (425)
T ss_dssp             EECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSC-EEEEEEETTT-EEEEEE---TTSEEEEEE
T ss_pred             eeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCcc-EEEEEECCCC-EEEEEe---CCCcEEEEE
Confidence            99999999999999999999999999999999999999988888877765 9999999999 788887   689999999


Q ss_pred             CCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe----------------eEEeeeeeCC--
Q psy17682        333 PDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF----------------VHYINTFQTP--  394 (490)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~----------------~~~~~~~~~~--  394 (490)
                      +++......  ...+...+.+++|+|++++| ++++.||.|++||+.+++..                ...+..+..+  
T Consensus       317 ~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (425)
T 1r5m_A          317 LKQNTLLAL--SIVDGVPIFAGRISQDGQKY-AVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQD  393 (425)
T ss_dssp             TTTTEEEEE--EECTTCCEEEEEECTTSSEE-EEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTC
T ss_pred             CCCCcEeEe--cccCCccEEEEEEcCCCCEE-EEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCccc
Confidence            987653222  22456789999999999998 78889999999999876410                0022333333  


Q ss_pred             C-ceeeEEEeeCceeEEee--cceeEEEEec
Q psy17682        395 D-PQRGIGMMPKRGCDVNS--CEIGRFFRLN  422 (490)
Q Consensus       395 ~-~i~~~~~sp~~~~l~~~--~~~~~~~~~~  422 (490)
                      . .|++++|+|++.+++++  ++.+++|++.
T Consensus       394 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  424 (425)
T 1r5m_A          394 NDYIFDLSWNCAGNKISVAYSLQEGSVVAIP  424 (425)
T ss_dssp             CCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred             CCceEEEEccCCCceEEEEecCceEEEEeec
Confidence            3 89999999999988776  4478899875

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=5.6e-39  Score=303.26  Aligned_cols=294  Identities=11%  Similarity=0.083  Sum_probs=224.2

Q ss_pred             ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCC---CCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCC
Q psy17682        111 STANEITISEDYVKEFKEEIRKLKSQQALSILPPPST---APNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSED  187 (490)
Q Consensus       111 ~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~---~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~d  187 (490)
                      ..+.+++|+|++  +   .+++++ ++.+++|+....   ................|...|.+++|+|++  .|++|+.|
T Consensus        31 ~~v~~~~fs~dG--~---~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~--~l~~~s~d  102 (344)
T 4gqb_B           31 RQLEAARYRSDG--A---LLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER--GILVASDS  102 (344)
T ss_dssp             SEEEEEEECTTS--C---EEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT--EEEEEETT
T ss_pred             CCEEEEEECCCC--C---EEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC--eEEEEECC
Confidence            458899999996  2   233333 444444431100   001111111222334577899999999964  78899999


Q ss_pred             CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEc
Q psy17682        188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWN  267 (490)
Q Consensus       188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~  267 (490)
                      |+|+|||+.+++......   ....+|...|++++|+|+++ +|++|+.|++|++||+++++.+..+.+|...|.+++|+
T Consensus       103 g~v~lWd~~~~~~~~~~~---~~~~~H~~~V~~v~~spdg~-~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~  178 (344)
T 4gqb_B          103 GAVELWELDENETLIVSK---FCKYEHDDIVSTVSVLSSGT-QAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAAS  178 (344)
T ss_dssp             SEEEEEEECTTSSCEEEE---EEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred             CEEEEEeccCCCceeEee---ccccCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEec
Confidence            999999999887655432   23557999999999999995 99999999999999999999999999999999999999


Q ss_pred             CCCC-EEEEEeCCCeEEEEeCCCCceeeeeeec-CCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEEe
Q psy17682        268 WDGS-KLLTTCKDKKMRIINPRTGAIEEEAVCH-EGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE  344 (490)
Q Consensus       268 ~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~  344 (490)
                      |++. +|++++.|++|++||++++++...+..+ ....+.+++|+|+ +++|++|+   .|+.|++||+++.+....+. 
T Consensus       179 ~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~---~dg~v~~wd~~~~~~~~~~~-  254 (344)
T 4gqb_B          179 PHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD---ENGTVSLVDTKSTSCVLSSA-  254 (344)
T ss_dssp             SSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEE---TTSEEEEEESCC--CCEEEE-
T ss_pred             CCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEec---cCCcEEEEECCCCcEEEEEc-
Confidence            9884 7899999999999999999988777532 2334889999985 67888888   68999999999877654443 


Q ss_pred             ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCcee-EEee--cceeEEEEe
Q psy17682        345 LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGC-DVNS--CEIGRFFRL  421 (490)
Q Consensus       345 ~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~-l~~~--~~~~~~~~~  421 (490)
                       .|...|.+++|+|++..++++|+.|+.|+|||+.+++    .+....|...|++++|+|++.. ++++  ++.+++|++
T Consensus       255 -~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~----~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v  329 (344)
T 4gqb_B          255 -VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE----LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVV  329 (344)
T ss_dssp             -CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE----EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred             -CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc----EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEEC
Confidence             5778899999999986544899999999999998875    2333456789999999999864 5454  568899999


Q ss_pred             cCCC
Q psy17682        422 NNSG  425 (490)
Q Consensus       422 ~~~~  425 (490)
                      .+..
T Consensus       330 ~~~~  333 (344)
T 4gqb_B          330 PTEP  333 (344)
T ss_dssp             CC--
T ss_pred             CCCC
Confidence            8765

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=2.5e-38  Score=298.64  Aligned_cols=326  Identities=11%  Similarity=0.100  Sum_probs=261.3

Q ss_pred             cccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccc
Q psy17682         42 YHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISED  121 (490)
Q Consensus        42 gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  121 (490)
                      -|.+.|.+++|+|++ .++++++.++.+.+|......                 .......      +...+.+++|+|+
T Consensus         7 ~~~~~v~~~~~s~dg-~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~------h~~~v~~~~~~~~   62 (337)
T 1gxr_A            7 MGSKPAYSFHVTADG-QMQPVPFPPDALIGPGIPRHA-----------------RQINTLN------HGEVVCAVTISNP   62 (337)
T ss_dssp             EEEEECCEEEECSSS-CEEECCCCTTSSSSTTCCSEE-----------------EEEEEEC------CSSCCCEEEECSS
T ss_pred             ccCCceeEEEECCCC-CEEEeecCCCcEeccccCCcc-----------------ccceecc------CCCceEEEEEecC
Confidence            366789999999999 788777777766555333211                 1111111      2346899999998


Q ss_pred             cccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceee--cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682        122 YVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVG--GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG  199 (490)
Q Consensus       122 ~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~--~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~  199 (490)
                      .     ..+++++ +|.+++|++.     .+........+.  +|...|.+++|+|++ ++|++++.||.|++||+.+++
T Consensus        63 ~-----~~l~~~~-dg~i~iw~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~  130 (337)
T 1gxr_A           63 T-----RHVYTGG-KGCVKVWDIS-----HPGNKSPVSQLDCLNRDNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAAPT  130 (337)
T ss_dssp             S-----SEEEEEC-BSEEEEEETT-----STTCCSCSEEEECSCTTSBEEEEEECTTS-SEEEEEESSSEEEEEECCCC-
T ss_pred             C-----cEEEEcC-CCeEEEEECC-----CCCceeeeecccccCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCC
Confidence            5     3455566 9999999986     222222333444  799999999999988 899999999999999998876


Q ss_pred             cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC
Q psy17682        200 ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD  279 (490)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  279 (490)
                      ...     ...+..|...|.+++|+|++. ++++++.|+.|++||+++++.+..+..|...+.+++|+|++++|++++.|
T Consensus       131 ~~~-----~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  204 (337)
T 1gxr_A          131 PRI-----KAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD  204 (337)
T ss_dssp             -EE-----EEEEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             cce-----eeecccCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecC
Confidence            321     223556899999999999985 99999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCC
Q psy17682        280 KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPD  359 (490)
Q Consensus       280 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~  359 (490)
                      |.|++||+++++.+..+. +.. .+.+++|+|++.++++++   .++.+++||+++..   ......+...+..++|+|+
T Consensus       205 g~i~~~d~~~~~~~~~~~-~~~-~v~~~~~s~~~~~l~~~~---~~~~i~~~~~~~~~---~~~~~~~~~~v~~~~~~~~  276 (337)
T 1gxr_A          205 NTVRSWDLREGRQLQQHD-FTS-QIFSLGYCPTGEWLAVGM---ESSNVEVLHVNKPD---KYQLHLHESCVLSLKFAYC  276 (337)
T ss_dssp             SEEEEEETTTTEEEEEEE-CSS-CEEEEEECTTSSEEEEEE---TTSCEEEEETTSSC---EEEECCCSSCEEEEEECTT
T ss_pred             CcEEEEECCCCceEeeec-CCC-ceEEEEECCCCCEEEEEc---CCCcEEEEECCCCC---eEEEcCCccceeEEEECCC
Confidence            999999999998877765 333 499999999999999998   68899999998765   2334467788999999999


Q ss_pred             CCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--ceeEEEEec
Q psy17682        360 TNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFRLN  422 (490)
Q Consensus       360 ~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~  422 (490)
                      +++| ++++.||.|++||+.+++..    ....+...+.+++|+|++.++++++  +.+++|++.
T Consensus       277 ~~~l-~~~~~dg~i~~~~~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  336 (337)
T 1gxr_A          277 GKWF-VSTGKDNLLNAWRTPYGASI----FQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI  336 (337)
T ss_dssp             SSEE-EEEETTSEEEEEETTTCCEE----EEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred             CCEE-EEecCCCcEEEEECCCCeEE----EEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence            9998 78889999999999998732    3345677899999999999888774  477888863

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=5.8e-39  Score=309.90  Aligned_cols=309  Identities=17%  Similarity=0.252  Sum_probs=236.6

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      +....+|.+.|++++|+|++ .+|++|+ |+++++|++.++............     ..................+.++
T Consensus        57 ~~~~~~h~~~V~~v~fspdg-~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~v~~v  129 (393)
T 1erj_A           57 LHKSLDHTSVVCCVKFSNDG-EYLATGC-NKTTQVYRVSDGSLVARLSDDSAA-----NKDPENLNTSSSPSSDLYIRSV  129 (393)
T ss_dssp             EEEEEECSSCCCEEEECTTS-SEEEEEC-BSCEEEEETTTCCEEEEECC----------------------CCCCBEEEE
T ss_pred             eEEecCCCCEEEEEEECCCC-CEEEEEc-CCcEEEEEecCCCEEEEecCcccc-----ccccccccccccCCCceeEEEE
Confidence            33445799999999999999 7888876 689999999887521110000000     0000000000011122358899


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP  196 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~  196 (490)
                      +|+|+.     ..+++++.++.|++|++.     .+   +....+.+|...|.+++|+|++ .+|++|+.|++|++||++
T Consensus       130 ~~s~dg-----~~l~s~~~d~~i~iwd~~-----~~---~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~  195 (393)
T 1erj_A          130 CFSPDG-----KFLATGAEDRLIRIWDIE-----NR---KIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLR  195 (393)
T ss_dssp             EECTTS-----SEEEEEETTSCEEEEETT-----TT---EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETT
T ss_pred             EECCCC-----CEEEEEcCCCeEEEEECC-----CC---cEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECC
Confidence            999985     357788999999999985     22   2455788999999999999998 899999999999999999


Q ss_pred             CCCcccccccceeeecccccCEEEEEEee-CCCCEEEEEeCCCcEEEEECCCCeeEEEE-------ecCCCcEEEEEEcC
Q psy17682        197 DGGISRTLTEPVVDLLYHQRRVGLVLWHP-TAQNVLLTAGSDNNVAIWNVGTGEIMIQI-------ECHPDIVYSASWNW  268 (490)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-------~~~~~~v~~~~~~~  268 (490)
                      +++....+.        +...+.+++|+| ++ .+|++|+.|+.|++||+++++.+..+       .+|...|.+++|+|
T Consensus       196 ~~~~~~~~~--------~~~~v~~~~~~~~~~-~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~  266 (393)
T 1erj_A          196 TGQCSLTLS--------IEDGVTTVAVSPGDG-KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR  266 (393)
T ss_dssp             TTEEEEEEE--------CSSCEEEEEECSTTC-CEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT
T ss_pred             CCeeEEEEE--------cCCCcEEEEEECCCC-CEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC
Confidence            887654432        667899999999 56 59999999999999999999887776       46889999999999


Q ss_pred             CCCEEEEEeCCCeEEEEeCCCC------------ceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC
Q psy17682        269 DGSKLLTTCKDKKMRIINPRTG------------AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL  336 (490)
Q Consensus       269 ~~~~l~~~~~dg~i~iwd~~~~------------~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~  336 (490)
                      ++++|++++.|++|++||+++.            .+...+.+|... +.+++|+|++.+|++|+   .|+.|++||..++
T Consensus       267 ~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~sgs---~D~~v~iwd~~~~  342 (393)
T 1erj_A          267 DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDF-VLSVATTQNDEYILSGS---KDRGVLFWDKKSG  342 (393)
T ss_dssp             TSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSC-EEEEEECGGGCEEEEEE---TTSEEEEEETTTC
T ss_pred             CCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCc-EEEEEECCCCCEEEEEe---CCCeEEEEECCCC
Confidence            9999999999999999999763            344556677765 99999999999999998   7899999999986


Q ss_pred             CCCeEEEeccCCCceeeeeecC------CCCeEEEEecCCCeEEEEEecCCC
Q psy17682        337 DEPIVMVELDTSNGVMFPLYDP------DTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       337 ~~~~~~~~~~~~~~i~~~~~s~------~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      .....  ...|...|.+++|++      ++++| ++|+.||.|++|++...+
T Consensus       343 ~~~~~--l~~h~~~v~~v~~~~~~~~~p~~~~l-~sgs~Dg~i~iW~~~~~~  391 (393)
T 1erj_A          343 NPLLM--LQGHRNSVISVAVANGSSLGPEYNVF-ATGSGDCKARIWKYKKIA  391 (393)
T ss_dssp             CEEEE--EECCSSCEEEEEECSSCTTCTTCEEE-EEEETTSEEEEEEEEEC-
T ss_pred             eEEEE--ECCCCCCEEEEEecCCcCcCCCCCEE-EEECCCCcEEECcccccC
Confidence            64322  235778899999876      56676 899999999999997643

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=4.5e-39  Score=313.73  Aligned_cols=327  Identities=13%  Similarity=0.114  Sum_probs=254.5

Q ss_pred             ceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccccc
Q psy17682         45 RRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVK  124 (490)
Q Consensus        45 ~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  124 (490)
                      ..+++++|+|++ .+|++++.|+.|++||+.++.......                        ....+....++++.  
T Consensus        57 ~~~~~~~~s~~g-~~l~~~~~d~~v~i~d~~~~~~~~~~~------------------------~~~~~~~~~~~~~~--  109 (420)
T 3vl1_A           57 DAGKGNTFEKVG-SHLYKARLDGHDFLFNTIIRDGSKMLK------------------------RADYTAVDTAKLQM--  109 (420)
T ss_dssp             BCCTTCEEEEEE-TTEEEEEETTEEEEEECCSEETTTTSC------------------------SCCEEEEEEECSSS--
T ss_pred             ccccceeeeecC-CeEEEEEcCCcEEEEEecccceeeEEe------------------------cCCceEEEEEecCC--
Confidence            345589999999 899999999999999998754221100                        00122334566664  


Q ss_pred             ceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccc
Q psy17682        125 EFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL  204 (490)
Q Consensus       125 ~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  204 (490)
                         ..+++++.+|.+++|++.     .+   .....+.+|.+.|.+++|+|++ .+|++|+.|++|++||+.+++.+.. 
T Consensus       110 ---~~l~~~~~dg~i~iwd~~-----~~---~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~-  176 (420)
T 3vl1_A          110 ---RRFILGTTEGDIKVLDSN-----FN---LQREIDQAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKDGSNPRT-  176 (420)
T ss_dssp             ---CEEEEEETTSCEEEECTT-----SC---EEEEETTSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCCCEE-
T ss_pred             ---CEEEEEECCCCEEEEeCC-----Cc---ceeeecccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCCCcCceE-
Confidence               357788999999999985     22   2344557999999999999988 8999999999999999998876554 


Q ss_pred             ccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec---CCCcEEEEE----------------
Q psy17682        205 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC---HPDIVYSAS----------------  265 (490)
Q Consensus       205 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~---~~~~v~~~~----------------  265 (490)
                            +.+|...|.+++|+|++. +|++++.|+.|++||+++++.+..+..   +...+.+++                
T Consensus       177 ------~~~h~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~  249 (420)
T 3vl1_A          177 ------LIGHRATVTDIAIIDRGR-NVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSK  249 (420)
T ss_dssp             ------EECCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCC
T ss_pred             ------EcCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCc
Confidence                  456999999999999985 999999999999999999999888874   444455554                


Q ss_pred             -----EcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc-EEEEEeCCCceeEEEEecCCCCCCC
Q psy17682        266 -----WNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL-IFTTGFSKMSERQYSLRAPDHLDEP  339 (490)
Q Consensus       266 -----~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~~~~~~~~~~i~iwd~~~~~~~  339 (490)
                           |+|++++|++++.||.|++||+++++....+.......+.+++|+|++. +|++|+   .++.|++||+++...+
T Consensus       250 v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~---~dg~i~vwd~~~~~~~  326 (420)
T 3vl1_A          250 KNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGY---ENGMLAQWDLRSPECP  326 (420)
T ss_dssp             CCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEE---TTSEEEEEETTCTTSC
T ss_pred             ccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEe---CCCeEEEEEcCCCcCc
Confidence                 5788999999999999999999999888777653334599999999998 999998   6899999999987765


Q ss_pred             eEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeE------EeeeeeCCCceeeEEEeeCce----eE
Q psy17682        340 IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVH------YINTFQTPDPQRGIGMMPKRG----CD  409 (490)
Q Consensus       340 ~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~------~~~~~~~~~~i~~~~~sp~~~----~l  409 (490)
                      ......++...+..+.+ +++++| ++++.|+.|++|++........      ......+...+.+++|+|++.    ++
T Consensus       327 ~~~~~~~~~~~v~~~~~-~~~~~l-~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~  404 (420)
T 3vl1_A          327 VGEFLINEGTPINNVYF-AAGALF-VSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVL  404 (420)
T ss_dssp             SEEEEESTTSCEEEEEE-ETTEEE-EEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEE
T ss_pred             hhhhhccCCCCceEEEe-CCCCEE-EEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEE
Confidence            55555456667888755 567776 7899999999999987432110      111223557899999999988    55


Q ss_pred             Eee-cceeEEEEecC
Q psy17682        410 VNS-CEIGRFFRLNN  423 (490)
Q Consensus       410 ~~~-~~~~~~~~~~~  423 (490)
                      +++ .+.+.+|++++
T Consensus       405 a~g~~g~~~~~~~~~  419 (420)
T 3vl1_A          405 EVGKNNFCALYNLSN  419 (420)
T ss_dssp             EEETTTEEEEEESCC
T ss_pred             EEcCCceEEEEeccC
Confidence            555 45778898764

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=1.4e-38  Score=308.75  Aligned_cols=259  Identities=18%  Similarity=0.251  Sum_probs=225.8

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK  104 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (490)
                      +..|+..+ ......+.+|.+.|.+++|+|++ .+|+||+.|++|++||+.++.                          
T Consensus       132 i~vwd~~~-~~~~~~l~~h~~~V~~v~~~~~~-~~l~sgs~D~~i~iwd~~~~~--------------------------  183 (410)
T 1vyh_C          132 IKVWDYET-GDFERTLKGHTDSVQDISFDHSG-KLLASCSADMTIKLWDFQGFE--------------------------  183 (410)
T ss_dssp             EEEEETTT-CCCCEEECCCSSCEEEEEECTTS-SEEEEEETTSCCCEEETTSSC--------------------------
T ss_pred             EEEEECCC-CcEEEEEeccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCc--------------------------
Confidence            44455433 34567899999999999999999 899999999999999987632                          


Q ss_pred             CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE
Q psy17682        105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG  184 (490)
Q Consensus       105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~  184 (490)
                                                                          .+..+.+|...|.+++|+|++ .+|++|
T Consensus       184 ----------------------------------------------------~~~~~~~h~~~V~~v~~~p~~-~~l~s~  210 (410)
T 1vyh_C          184 ----------------------------------------------------CIRTMHGHDHNVSSVSIMPNG-DHIVSA  210 (410)
T ss_dssp             ----------------------------------------------------EEECCCCCSSCEEEEEECSSS-SEEEEE
T ss_pred             ----------------------------------------------------eeEEEcCCCCCEEEEEEeCCC-CEEEEE
Confidence                                                                111345899999999999988 899999


Q ss_pred             eCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEE
Q psy17682        185 SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSA  264 (490)
Q Consensus       185 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~  264 (490)
                      +.|++|++||++++.++..       +.+|...|.++.|+|++. +|++|+.|+.|++||+++++....+.+|...|.++
T Consensus       211 s~D~~i~~wd~~~~~~~~~-------~~~h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~  282 (410)
T 1vyh_C          211 SRDKTIKMWEVQTGYCVKT-------FTGHREWVRMVRPNQDGT-LIASCSNDQTVRVWVVATKECKAELREHRHVVECI  282 (410)
T ss_dssp             ETTSEEEEEETTTCCEEEE-------EECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred             eCCCeEEEEECCCCcEEEE-------EeCCCccEEEEEECCCCC-EEEEEcCCCeEEEEECCCCceeeEecCCCceEEEE
Confidence            9999999999998876554       456999999999999995 99999999999999999999999999999999999


Q ss_pred             EEcCC--------------------CCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCc
Q psy17682        265 SWNWD--------------------GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMS  324 (490)
Q Consensus       265 ~~~~~--------------------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~  324 (490)
                      +|+|+                    +.+|++|+.|++|++||+++++++..+.+|... +.+++|+|+|++|++|+   .
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~-v~~v~~~~~g~~l~s~s---~  358 (410)
T 1vyh_C          283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCA---D  358 (410)
T ss_dssp             EECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSC-EEEEEECSSSSCEEEEE---T
T ss_pred             EEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCc-EEEEEEcCCCCEEEEEe---C
Confidence            99996                    678999999999999999999999999988875 99999999999999998   6


Q ss_pred             eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        325 ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       325 ~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      |+.|++||+.+......+.  .|...|.+++|+|++++| ++|+.||.|++|+++
T Consensus       359 D~~i~vwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~l-~sgs~D~~i~vW~~r  410 (410)
T 1vyh_C          359 DKTLRVWDYKNKRCMKTLN--AHEHFVTSLDFHKTAPYV-VTGSVDQTVKVWECR  410 (410)
T ss_dssp             TTEEEEECCTTSCCCEEEE--CCSSCEEEEEECSSSSCE-EEEETTSEEEEEC--
T ss_pred             CCeEEEEECCCCceEEEEc--CCCCcEEEEEEcCCCCEE-EEEeCCCcEEEEeCC
Confidence            8999999998876554443  567789999999999998 899999999999864

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=9.7e-39  Score=299.30  Aligned_cols=249  Identities=16%  Similarity=0.190  Sum_probs=219.5

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      ....+.||...|.+++|+|++ .+++|++.|++|++||+.++..                                    
T Consensus        72 ~~~~l~gh~~~v~~~~~~~~~-~~l~s~s~D~~i~lWd~~~~~~------------------------------------  114 (321)
T 3ow8_A           72 LQWSLEGHQLGVVSVDISHTL-PIAASSSLDAHIRLWDLENGKQ------------------------------------  114 (321)
T ss_dssp             EEEEECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEE------------------------------------
T ss_pred             eeeeeccCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCCE------------------------------------
Confidence            345689999999999999999 8999999999999999987430                                    


Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI  195 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~  195 (490)
                                                                +..+..|...+.+++|+|++ .+|++|+.||.|++|++
T Consensus       115 ------------------------------------------~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~  151 (321)
T 3ow8_A          115 ------------------------------------------IKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGV  151 (321)
T ss_dssp             ------------------------------------------EEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEET
T ss_pred             ------------------------------------------EEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEc
Confidence                                                      11234567788899999998 89999999999999999


Q ss_pred             CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEE
Q psy17682        196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLT  275 (490)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  275 (490)
                      ++++....       +..|...|.+++|+|+++ +|++|+.|+.|++||+++++.+..+.+|...|.+++|+|++++|++
T Consensus       152 ~~~~~~~~-------~~~~~~~v~~~~~spdg~-~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s  223 (321)
T 3ow8_A          152 ESGKKEYS-------LDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVT  223 (321)
T ss_dssp             TTCSEEEE-------EECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEE
T ss_pred             CCCceeEE-------ecCCCceEEEEEECCCCC-EEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEE
Confidence            88866544       445888999999999995 9999999999999999999999999999999999999999999999


Q ss_pred             EeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeee
Q psy17682        276 TCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPL  355 (490)
Q Consensus       276 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~  355 (490)
                      ++.|++|++||+++++....+.+|... +.+++|+|++.+|++++   .|+.|++||+.+..+...  ...|...|.+++
T Consensus       224 ~s~dg~i~iwd~~~~~~~~~~~~h~~~-v~~~~~sp~~~~l~s~s---~D~~v~iwd~~~~~~~~~--~~~h~~~v~~v~  297 (321)
T 3ow8_A          224 ASDDGYIKIYDVQHANLAGTLSGHASW-VLNVAFCPDDTHFVSSS---SDKSVKVWDVGTRTCVHT--FFDHQDQVWGVK  297 (321)
T ss_dssp             ECTTSCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEEEEE---TTSCEEEEETTTTEEEEE--ECCCSSCEEEEE
T ss_pred             EcCCCeEEEEECCCcceeEEEcCCCCc-eEEEEECCCCCEEEEEe---CCCcEEEEeCCCCEEEEE--EcCCCCcEEEEE
Confidence            999999999999999999999888875 99999999999999998   689999999987654322  235778899999


Q ss_pred             ecCCCCeEEEEecCCCeEEEEEec
Q psy17682        356 YDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       356 ~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      |+|++++| ++++.|+.|++||+.
T Consensus       298 ~s~~g~~l-~s~~~d~~i~vwd~p  320 (321)
T 3ow8_A          298 YNGNGSKI-VSVGDDQEIHIYDCP  320 (321)
T ss_dssp             ECTTSSEE-EEEETTCCEEEEECC
T ss_pred             ECCCCCEE-EEEeCCCeEEEEeCC
Confidence            99999998 789999999999963

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=3.2e-38  Score=327.38  Aligned_cols=296  Identities=14%  Similarity=0.177  Sum_probs=239.2

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      ....+.+|.+.|++++|+|++..+|+|||.|++|++|++.......                                  
T Consensus       374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~----------------------------------  419 (694)
T 3dm0_A          374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY----------------------------------  419 (694)
T ss_dssp             EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS----------------------------------
T ss_pred             hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc----------------------------------
Confidence            3456899999999999999887899999999999999987633100                                  


Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI  195 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~  195 (490)
                                                             ......+.+|.+.|.+++|+|++ .+|++|+.||+|++||+
T Consensus       420 ---------------------------------------~~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg~v~vwd~  459 (694)
T 3dm0_A          420 ---------------------------------------GVAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDGELRLWDL  459 (694)
T ss_dssp             ---------------------------------------CEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEET
T ss_pred             ---------------------------------------ccccceecCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEEC
Confidence                                                   00112467999999999999998 89999999999999999


Q ss_pred             CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE---ecCCCcEEEEEEcCCC--
Q psy17682        196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI---ECHPDIVYSASWNWDG--  270 (490)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~~--  270 (490)
                      .+++....       +.+|...|.+++|+|++. +|++|+.|++|++||..........   .+|...|.+++|+|++  
T Consensus       460 ~~~~~~~~-------~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~  531 (694)
T 3dm0_A          460 AAGVSTRR-------FVGHTKDVLSVAFSLDNR-QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ  531 (694)
T ss_dssp             TTTEEEEE-------EECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS
T ss_pred             CCCcceeE-------EeCCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc
Confidence            88865544       556999999999999995 8999999999999998655433322   3688899999999987  


Q ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCc
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNG  350 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~  350 (490)
                      ..|++++.|++|++||+++++....+.+|.+. +.+++|+|++++|++|+   .|+.|++||+++++   ......+...
T Consensus       532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~-v~~v~~spdg~~l~sg~---~Dg~i~iwd~~~~~---~~~~~~~~~~  604 (694)
T 3dm0_A          532 PTIVSASWDKTVKVWNLSNCKLRSTLAGHTGY-VSTVAVSPDGSLCASGG---KDGVVLLWDLAEGK---KLYSLEANSV  604 (694)
T ss_dssp             CEEEEEETTSCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEEEEE---TTSBCEEEETTTTE---EEECCBCSSC
T ss_pred             ceEEEEeCCCeEEEEECCCCcEEEEEcCCCCC-EEEEEEeCCCCEEEEEe---CCCeEEEEECCCCc---eEEEecCCCc
Confidence            58999999999999999999999999888875 99999999999999998   78999999998765   3344455677


Q ss_pred             eeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee----------------eCCCceeeEEEeeCceeEEee--
Q psy17682        351 VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF----------------QTPDPQRGIGMMPKRGCDVNS--  412 (490)
Q Consensus       351 i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~----------------~~~~~i~~~~~sp~~~~l~~~--  412 (490)
                      +.+++|+|++.++ +++ .|+.|++||+.+++.+.......                .+...+++++|+|+|.+++++  
T Consensus       605 v~~~~~sp~~~~l-~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~  682 (694)
T 3dm0_A          605 IHALCFSPNRYWL-CAA-TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYT  682 (694)
T ss_dssp             EEEEEECSSSSEE-EEE-ETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEET
T ss_pred             EEEEEEcCCCcEE-EEE-cCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcC
Confidence            9999999999887 444 46779999999876322111000                011236899999999999988  


Q ss_pred             cceeEEEEec
Q psy17682        413 CEIGRFFRLN  422 (490)
Q Consensus       413 ~~~~~~~~~~  422 (490)
                      ++.+++|++.
T Consensus       683 Dg~i~iW~i~  692 (694)
T 3dm0_A          683 DGVIRVWGIG  692 (694)
T ss_dssp             TSEEEEEEC-
T ss_pred             CCeEEEEecc
Confidence            4588999875

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=1.5e-37  Score=299.26  Aligned_cols=298  Identities=13%  Similarity=0.106  Sum_probs=235.3

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      ......+.+|.+.|++++|+|+++.+|++|+.||.|++||+.++...                                 
T Consensus        63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~---------------------------------  109 (383)
T 3ei3_B           63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKT---------------------------------  109 (383)
T ss_dssp             CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCE---------------------------------
T ss_pred             cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccc---------------------------------
Confidence            44566889999999999999998789999999999999999864410                                 


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                                                ..+                 ...+|.+.|.+++|+|+++.+|++++.|+.|++|
T Consensus       110 --------------------------~~~-----------------~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw  146 (383)
T 3ei3_B          110 --------------------------SFI-----------------QGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLR  146 (383)
T ss_dssp             --------------------------EEE-----------------CCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEE
T ss_pred             --------------------------eee-----------------ecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEE
Confidence                                      000                 1237999999999999444899999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCC-E
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS-K  272 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~  272 (490)
                      |+.+ +....+..    ...|...|.+++|+|++. +|++|+.|+.|++||+ +++.+..+..|...|.+++|+|+++ +
T Consensus       147 d~~~-~~~~~~~~----~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~  219 (383)
T 3ei3_B          147 DFSG-SVIQVFAK----TDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWL  219 (383)
T ss_dssp             ETTS-CEEEEEEC----CCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTE
T ss_pred             ECCC-CceEEEec----cCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCE
Confidence            9985 33332221    234568899999999995 9999999999999999 5778888999999999999999998 9


Q ss_pred             EEEEeCCCeEEEEeCCC----CceeeeeeecCCCceeEEEEeC-CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc-
Q psy17682        273 LLTTCKDKKMRIINPRT----GAIEEEAVCHEGSKATRAIYLK-SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD-  346 (490)
Q Consensus       273 l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~-  346 (490)
                      |++++.|+.|++||+++    +..+..+ .|... +.+++|+| ++.+|++++   .|+.|++||+++......+.... 
T Consensus       220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~-v~~~~~s~~~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~  294 (383)
T 3ei3_B          220 MATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKP-VNAAYFNPTDSTKLLTTD---QRNEIRVYSSYDWSKPDQIIIHPH  294 (383)
T ss_dssp             EEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSC-EEEEEECTTTSCEEEEEE---SSSEEEEEETTBTTSCSEEEECCB
T ss_pred             EEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCc-eEEEEEcCCCCCEEEEEc---CCCcEEEEECCCCccccccccccc
Confidence            99999999999999998    5555555 56654 99999999 999999998   68999999999877655544221 


Q ss_pred             ----CC----------CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee
Q psy17682        347 ----TS----------NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS  412 (490)
Q Consensus       347 ----~~----------~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~  412 (490)
                          +.          ..+..++|+|++++   +|+.|+.|++||+.+++. ...+....+...+..++|+|++.+++++
T Consensus       295 ~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~---s~s~d~~i~iwd~~~~~~-~~~l~~~~~~~~~~~~~~s~~g~~l~s~  370 (383)
T 3ei3_B          295 RQFQHLTPIKATWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGL-VHQLRDPNAAGIISLNKFSPTGDVLASG  370 (383)
T ss_dssp             CCCTTSCCCCCEECSSSSEEEEECBCCTTT---CTTCCCCEEEEETTTCCE-EEEECBTTBCSCCCEEEECTTSSEEEEE
T ss_pred             cccccccceEEeccCCCCceEEEecCCccc---ccCCCCeEEEEecCCCce-eeeecCCCCCceEEEEEEecCccEEEEe
Confidence                11          23344666666666   677999999999999873 2333322234567778999999988877


Q ss_pred             -cceeEEEEecC
Q psy17682        413 -CEIGRFFRLNN  423 (490)
Q Consensus       413 -~~~~~~~~~~~  423 (490)
                       ++.+++|++.+
T Consensus       371 sd~~i~iw~~~~  382 (383)
T 3ei3_B          371 MGFNILIWNRED  382 (383)
T ss_dssp             ETTEEEEEECC-
T ss_pred             cCCcEEEEecCC
Confidence             44889999864

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=1.2e-37  Score=289.82  Aligned_cols=254  Identities=14%  Similarity=0.183  Sum_probs=216.6

Q ss_pred             CcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC
Q psy17682        157 DHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS  236 (490)
Q Consensus       157 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~  236 (490)
                      ..+++.+|.+.|.+++|+|++ .+|++|+.||+|++||+.++..+..       +..|...|.+++|+|++. +|++|+.
T Consensus         5 ~~~~~~~h~~~V~~~~fsp~~-~~l~s~~~dg~v~lWd~~~~~~~~~-------~~~~~~~v~~~~~~~~~~-~l~s~s~   75 (304)
T 2ynn_A            5 IKKTFSNRSDRVKGIDFHPTE-PWVLTTLYSGRVELWNYETQVEVRS-------IQVTETPVRAGKFIARKN-WIIVGSD   75 (304)
T ss_dssp             CEEEEEEECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEEEEE-------EECCSSCEEEEEEEGGGT-EEEEEET
T ss_pred             eEEeecCCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCceeEE-------eeccCCcEEEEEEeCCCC-EEEEECC
Confidence            355788999999999999998 8999999999999999988866554       455899999999999985 9999999


Q ss_pred             CCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-eeeeeeecCCCceeEEEEeC-CCc
Q psy17682        237 DNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGA-IEEEAVCHEGSKATRAIYLK-SGL  314 (490)
Q Consensus       237 dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~s~-~~~  314 (490)
                      |+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||++++. ....+.+|... +.+++|+| ++.
T Consensus        76 d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~-v~~v~~~p~~~~  154 (304)
T 2ynn_A           76 DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHF-VMCVAFNPKDPS  154 (304)
T ss_dssp             TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSC-EEEEEECTTCTT
T ss_pred             CCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCc-EEEEEECCCCCC
Confidence            9999999999999999999999999999999999999999999999999999874 45566777765 99999999 578


Q ss_pred             EEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecC--CCCeEEEEecCCCeEEEEEecCCCCeeEEeeee-
Q psy17682        315 IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDP--DTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF-  391 (490)
Q Consensus       315 ~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~-  391 (490)
                      +|++|+   .|+.|++||++......... ..+...+..+.|+|  ++++| ++|+.|+.|++||+++++.    +..+ 
T Consensus       155 ~l~sgs---~D~~v~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l-~s~s~D~~i~iWd~~~~~~----~~~~~  225 (304)
T 2ynn_A          155 TFASGC---LDRTVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKPYM-ITASDDLTIKIWDYQTKSC----VATLE  225 (304)
T ss_dssp             EEEEEE---TTSEEEEEETTCSSCSEEEE-CCCTTCEEEEEECCSTTCCEE-EEEETTSEEEEEETTTTEE----EEEEE
T ss_pred             EEEEEe---CCCeEEEEECCCCCccceec-cCCcCcEEEEEEEEcCCCCEE-EEEcCCCeEEEEeCCCCcc----ceeeC
Confidence            999998   79999999998766544433 34556788888887  66777 8999999999999998862    2223 


Q ss_pred             eCCCceeeEEEeeCceeEEee--cceeEEEEecCCCceEE
Q psy17682        392 QTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSGLCQV  429 (490)
Q Consensus       392 ~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~~~~~  429 (490)
                      .|...|..++|+|++.+++++  ++.+++|++.+.+....
T Consensus       226 ~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~  265 (304)
T 2ynn_A          226 GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT  265 (304)
T ss_dssp             CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred             CCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeee
Confidence            355789999999999988887  45889999998874443

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=1.4e-37  Score=288.41  Aligned_cols=257  Identities=20%  Similarity=0.239  Sum_probs=211.1

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      +..+.+|.+.|++++|+|++ .+|+||+.|++|+|||+..+..                                     
T Consensus         2 ~~~~~~h~~~V~~~~~s~~g-~~las~s~D~~v~iw~~~~~~~-------------------------------------   43 (297)
T 2pm7_B            2 VVIANAHNEMIHDAVMDYYG-KRMATCSSDKTIKIFEVEGETH-------------------------------------   43 (297)
T ss_dssp             CEECCSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEBCSSCB-------------------------------------
T ss_pred             ceeccCCcCceEEEEECCCC-CEEEEEeCCCEEEEEecCCCCc-------------------------------------
Confidence            45788999999999999999 8999999999999999864210                                     


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCC-CCCEEEEEeCCCcEEEEEC
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPH-DDNVIASGSEDCVVKVWQI  195 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~-~~~~l~s~~~dg~i~iwd~  195 (490)
                                                             ....++.+|.++|.+++|+|. .+.+|++|+.|++|++||+
T Consensus        44 ---------------------------------------~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~   84 (297)
T 2pm7_B           44 ---------------------------------------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE   84 (297)
T ss_dssp             ---------------------------------------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred             ---------------------------------------EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence                                                   012356799999999999864 2389999999999999999


Q ss_pred             CCCCcccccccceeeecccccCEEEEEEeeC--CCCEEEEEeCCCcEEEEECCCCe--eEEEEecCCCcEEEEEEcCC--
Q psy17682        196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPT--AQNVLLTAGSDNNVAIWNVGTGE--IMIQIECHPDIVYSASWNWD--  269 (490)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--  269 (490)
                      ++++...     ...+.+|...|.+++|+|+  + .+|++++.|+.|++||++++.  ....+.+|...|.+++|+|+  
T Consensus        85 ~~~~~~~-----~~~~~~h~~~v~~v~~~p~~~g-~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~  158 (297)
T 2pm7_B           85 ENGRWSQ-----IAVHAVHSASVNSVQWAPHEYG-PMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI  158 (297)
T ss_dssp             SSSCBCC-----CEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-
T ss_pred             CCCceEE-----EEEeecCCCceeEEEeCcCCCC-cEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcc
Confidence            8764311     2235569999999999997  6 499999999999999998763  24567789999999999997  


Q ss_pred             -----------CCEEEEEeCCCeEEEEeCCCCc----eeeeeeecCCCceeEEEEeCCC---cEEEEEeCCCceeEEEEe
Q psy17682        270 -----------GSKLLTTCKDKKMRIINPRTGA----IEEEAVCHEGSKATRAIYLKSG---LIFTTGFSKMSERQYSLR  331 (490)
Q Consensus       270 -----------~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~s~~~---~~l~~~~~~~~~~~i~iw  331 (490)
                                 +++|++++.|++|++||+++++    ....+.+|... +.+++|+|++   .+|++++   .|+.|++|
T Consensus       159 ~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~-V~~v~~sp~~~~~~~las~s---~D~~v~iW  234 (297)
T 2pm7_B          159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW-VRDVAWSPTVLLRSYMASVS---QDRTCIIW  234 (297)
T ss_dssp             -----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC-EEEEEECCCCSSSEEEEEEE---TTSCEEEE
T ss_pred             cccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCc-eEEEEECCCCCCceEEEEEE---CCCcEEEE
Confidence                       5799999999999999998776    55667788775 9999999994   8999998   78999999


Q ss_pred             cCCCCCCCeEEEe---ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        332 APDHLDEPIVMVE---LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       332 d~~~~~~~~~~~~---~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      |++....+.....   ..+...|.+++|+|+|++| ++++.|+.|++|+....
T Consensus       235 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l-as~~~D~~v~lw~~~~~  286 (297)
T 2pm7_B          235 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVL-ALSGGDNKVTLWKENLE  286 (297)
T ss_dssp             EESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCE-EEEETTSCEEEEEECTT
T ss_pred             EeCCCCCccceeeeecccCCCcEEEEEECCCCCEE-EEEcCCCcEEEEEECCC
Confidence            9987543222222   2456679999999999998 78999999999998743

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=1.1e-38  Score=306.63  Aligned_cols=297  Identities=14%  Similarity=0.148  Sum_probs=241.3

Q ss_pred             cccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCc
Q psy17682        110 NSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCV  189 (490)
Q Consensus       110 ~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~  189 (490)
                      ...|.+++|+|+.     ..+++++.|+.|++|+..     .+   .....+.+|...|.+++|+|++ .+|++|+.|+.
T Consensus        66 ~~~V~~~~~sp~~-----~~l~s~s~D~~v~iWd~~-----~~---~~~~~~~~h~~~v~~~~~s~~g-~~las~~~d~~  131 (380)
T 3iz6_a           66 SGKVYSLDWTPEK-----NWIVSASQDGRLIVWNAL-----TS---QKTHAIKLHCPWVMECAFAPNG-QSVACGGLDSA  131 (380)
T ss_dssp             SSCEEEEEECTTS-----SCEEEEETTSEEEEEETT-----TT---EEEEEEECCCTTCCCCEECTTS-SEEEECCSSSC
T ss_pred             ccEEEEEEEcCCC-----CEEEEEeCCCeEEEEECC-----CC---ccceEEecCCCCEEEEEECCCC-CEEEEeeCCCc
Confidence            4468999999985     357889999999999985     22   2456778999999999999998 89999999999


Q ss_pred             EEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE-----ecCCCcEEEE
Q psy17682        190 VKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI-----ECHPDIVYSA  264 (490)
Q Consensus       190 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-----~~~~~~v~~~  264 (490)
                      |++|++.+.............+.+|...|.++.|.|++...|++|+.|++|++||+++++.+..+     .+|...|.++
T Consensus       132 v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~  211 (380)
T 3iz6_a          132 CSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSL  211 (380)
T ss_dssp             CEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEE
T ss_pred             EEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEE
Confidence            99999976432211112233467899999999999987668999999999999999999988877     5788999999


Q ss_pred             EEcC-CCCEEEEEeCCCeEEEEeCC-CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE
Q psy17682        265 SWNW-DGSKLLTTCKDKKMRIINPR-TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM  342 (490)
Q Consensus       265 ~~~~-~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~  342 (490)
                      +|++ ++++|++|+.|++|++||++ .++.+..+.+|.+. +.+++|+|++.+|++|+   .|+.|++||++++......
T Consensus       212 ~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~-v~~v~~~p~~~~l~s~s---~D~~i~lwd~~~~~~~~~~  287 (380)
T 3iz6_a          212 SINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGD-INSVKFFPDGQRFGTGS---DDGTCRLFDMRTGHQLQVY  287 (380)
T ss_dssp             EECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSC-CCEEEECTTSSEEEEEC---SSSCEEEEETTTTEEEEEE
T ss_pred             EeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCC-eEEEEEecCCCeEEEEc---CCCeEEEEECCCCcEEEEe
Confidence            9987 88999999999999999998 45777888888876 99999999999999998   7899999999986543322


Q ss_pred             Eecc-----CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee-eeCCCceeeEEEeeCceeEEee--cc
Q psy17682        343 VELD-----TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT-FQTPDPQRGIGMMPKRGCDVNS--CE  414 (490)
Q Consensus       343 ~~~~-----~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~--~~  414 (490)
                      ....     +...+.+++|+|+|++| ++|+.||.|++||+..++........ ..|...|.+++|+|++.+++++  ++
T Consensus       288 ~~~~~~~~~~~~~v~~~~~s~~g~~l-~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~  366 (380)
T 3iz6_a          288 NREPDRNDNELPIVTSVAFSISGRLL-FAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK  366 (380)
T ss_dssp             CCCCSSSCCSSCSCSEEEECSSSSEE-EEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS
T ss_pred             cccccccccccCceEEEEECCCCCEE-EEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC
Confidence            2111     11248899999999998 78999999999999888733222111 2356789999999999999988  45


Q ss_pred             eeEEEEecCCC
Q psy17682        415 IGRFFRLNNSG  425 (490)
Q Consensus       415 ~~~~~~~~~~~  425 (490)
                      .+++|++....
T Consensus       367 ~i~iW~~~~~~  377 (380)
T 3iz6_a          367 NLKIWAFSGHR  377 (380)
T ss_dssp             CEEEEECCSSS
T ss_pred             CEEEEecCCCc
Confidence            88999987654

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=5.3e-39  Score=314.60  Aligned_cols=302  Identities=13%  Similarity=0.125  Sum_probs=226.7

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      .......+|...|+||+|+|.++.+||+|+.||+|+|||+..+...                                  
T Consensus       110 ~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~----------------------------------  155 (435)
T 4e54_B          110 RILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP----------------------------------  155 (435)
T ss_dssp             TSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC----------------------------------
T ss_pred             eecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce----------------------------------
Confidence            3445677899999999999987789999999999999998764310                                  


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                                                                ....+.+|.+.|++|+|+|.++.+|++|+.||+|++||
T Consensus       156 ------------------------------------------~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd  193 (435)
T 4e54_B          156 ------------------------------------------TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD  193 (435)
T ss_dssp             ------------------------------------------EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred             ------------------------------------------eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence                                                      00123489999999999996558999999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCC-EE
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS-KL  273 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l  273 (490)
                      ++++... .+.    ....+...+.+++|+|++. +|++|+.||.|++||++ ++.+..+.+|...|.+++|+|+++ +|
T Consensus       194 ~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~  266 (435)
T 4e54_B          194 FKGNILR-VFA----SSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFL  266 (435)
T ss_dssp             TTSCEEE-EEE----CCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEE
T ss_pred             ccCCcee-EEe----ccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEE
Confidence            9765332 111    1223445678999999995 99999999999999986 456677889999999999999876 78


Q ss_pred             EEEeCCCeEEEEeCCCCceeeee---eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccC---
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEA---VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDT---  347 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~---  347 (490)
                      ++++.|++|++||+++.+....+   .+|... +.+++|+|+|.+|++++   .|+.|++||+.+...+.......+   
T Consensus       267 ~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~-v~~~~~spdg~~l~s~~---~D~~i~iwd~~~~~~~~~~~~~~~~~~  342 (435)
T 4e54_B          267 ATASVDQTVKIWDLRQVRGKASFLYSLPHRHP-VNAACFSPDGARLLTTD---QKSEIRVYSASQWDCPLGLIPHPHRHF  342 (435)
T ss_dssp             EEEETTSBCCEEETTTCCSSSCCSBCCBCSSC-EEECCBCTTSSEEEEEE---SSSCEEEEESSSSSSEEEECCCCCCCC
T ss_pred             EEecCcceeeEEecccccccceEEEeeecccc-ccceeECCCCCeeEEEc---CCCEEEEEECCCCccceEEeccccccc
Confidence            89999999999999987654433   356654 99999999999999998   789999999998775544332111   


Q ss_pred             -CCceeeeeecCCCCeEEE-----------EecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeE-EEeeCceeEEee-c
Q psy17682        348 -SNGVMFPLYDPDTNLVYL-----------CGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGI-GMMPKRGCDVNS-C  413 (490)
Q Consensus       348 -~~~i~~~~~s~~~~~l~~-----------~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~-~~sp~~~~l~~~-~  413 (490)
                       ...+....|+|++..+++           ++..++.|++||..+++......  ..+...|.++ +|+|+|.+++++ +
T Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~--~~~~~~v~s~~~fspdg~~lasg~d  420 (435)
T 4e54_B          343 QHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLY--DPESSGISSLNEFNPMGDTLASAMG  420 (435)
T ss_dssp             SSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEEC--CSSCCCCCCEEEECTTSSCEEEECS
T ss_pred             ccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEe--CCCCCcEEEEEEECCCCCEEEEEcC
Confidence             112334456666655532           22345689999999987332211  1344678887 699999999887 4


Q ss_pred             ceeEEEEecCCC
Q psy17682        414 EIGRFFRLNNSG  425 (490)
Q Consensus       414 ~~~~~~~~~~~~  425 (490)
                      +.+++|++.+++
T Consensus       421 ~~i~iW~~~~gk  432 (435)
T 4e54_B          421 YHILIWSQQEAR  432 (435)
T ss_dssp             SEEEECCCC---
T ss_pred             CcEEEEECCcCe
Confidence            588999998876

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.3e-36  Score=290.56  Aligned_cols=294  Identities=16%  Similarity=0.240  Sum_probs=245.1

Q ss_pred             CCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccc
Q psy17682         32 TLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNS  111 (490)
Q Consensus        32 ~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (490)
                      ........|.+|.+.|++++|+|++ .+|++|+.||.|++||+.++.                                 
T Consensus        20 G~~~~~~~l~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~---------------------------------   65 (369)
T 3zwl_B           20 GSHMKAIKLTGHERPLTQVKYNKEG-DLLFSCSKDSSASVWYSLNGE---------------------------------   65 (369)
T ss_dssp             CCSEEEEEEECCSSCEEEEEECTTS-CEEEEEESSSCEEEEETTTCC---------------------------------
T ss_pred             ccccccEEEEEeeceEEEEEEcCCC-CEEEEEeCCCEEEEEeCCCch---------------------------------
Confidence            3455667799999999999999998 899999999999999987643                                 


Q ss_pred             cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEE
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVK  191 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~  191 (490)
                                                                   ....+.+|.+.|.+++|+|++ ++|++++.||.|+
T Consensus        66 ---------------------------------------------~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~   99 (369)
T 3zwl_B           66 ---------------------------------------------RLGTLDGHTGTIWSIDVDCFT-KYCVTGSADYSIK   99 (369)
T ss_dssp             ---------------------------------------------EEEEECCCSSCEEEEEECTTS-SEEEEEETTTEEE
T ss_pred             ---------------------------------------------hhhhhhhcCCcEEEEEEcCCC-CEEEEEeCCCeEE
Confidence                                                         111345799999999999988 8999999999999


Q ss_pred             EEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC-----CcEEEEECCCCe-----------eEEEEe
Q psy17682        192 VWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-----NNVAIWNVGTGE-----------IMIQIE  255 (490)
Q Consensus       192 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~v~iwd~~~~~-----------~~~~~~  255 (490)
                      +||+.+++....+.        +...+.+++|+|++. ++++++.+     +.|++||+..+.           .+..+.
T Consensus       100 iwd~~~~~~~~~~~--------~~~~v~~~~~~~~~~-~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~  170 (369)
T 3zwl_B          100 LWDVSNGQCVATWK--------SPVPVKRVEFSPCGN-YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII  170 (369)
T ss_dssp             EEETTTCCEEEEEE--------CSSCEEEEEECTTSS-EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE
T ss_pred             EEECCCCcEEEEee--------cCCCeEEEEEccCCC-EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc
Confidence            99999887765432        788999999999995 89999998     999999987653           344455


Q ss_pred             cCCC--cEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-CceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEec
Q psy17682        256 CHPD--IVYSASWNWDGSKLLTTCKDKKMRIINPRT-GAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRA  332 (490)
Q Consensus       256 ~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd  332 (490)
                      .|..  .+.+++|+|++++|++++.||.|++||+++ ++....+..|... +.+++|+|++.+|++++   .++.|++||
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~---~d~~i~v~d  246 (369)
T 3zwl_B          171 THEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKS-ISDMQFSPDLTYFITSS---RDTNSFLVD  246 (369)
T ss_dssp             CCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSC-EEEEEECTTSSEEEEEE---TTSEEEEEE
T ss_pred             CCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCc-eeEEEECCCCCEEEEec---CCceEEEEE
Confidence            5666  899999999999999999999999999998 6777788777765 99999999999999998   689999999


Q ss_pred             CCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC--------------eEEEEEecCCCCeeEEeeeeeCCCcee
Q psy17682        333 PDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS--------------VIRYFEITAEPPFVHYINTFQTPDPQR  398 (490)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~i~  398 (490)
                      +++...   .....+...+..++|+|+++++ ++++.++              .+++||+.++++.. .+  ..+...|+
T Consensus       247 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-~~--~~~~~~v~  319 (369)
T 3zwl_B          247 VSTLQV---LKKYETDCPLNTAVITPLKEFI-ILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIG-RV--QGHFGPLN  319 (369)
T ss_dssp             TTTCCE---EEEEECSSCEEEEEECSSSSEE-EEEECCC-------------CEEEEEETTTCCEEE-EE--ECCSSCEE
T ss_pred             CCCCce---eeeecCCCCceeEEecCCCceE-EEeecCCCceEEEEecCCCcceeEEEecCCCcchh-he--ecccCcEE
Confidence            998653   3333466789999999999999 5666666              89999999987332 22  23557899


Q ss_pred             eEEEeeCceeEEee--cceeEEEEecCCC
Q psy17682        399 GIGMMPKRGCDVNS--CEIGRFFRLNNSG  425 (490)
Q Consensus       399 ~~~~sp~~~~l~~~--~~~~~~~~~~~~~  425 (490)
                      +++|+|++.+++++  ++.+++|++..+.
T Consensus       320 ~~~~s~~~~~l~s~~~dg~v~iw~~~~~~  348 (369)
T 3zwl_B          320 TVAISPQGTSYASGGEDGFIRLHHFEKSY  348 (369)
T ss_dssp             EEEECTTSSEEEEEETTSEEEEEEECHHH
T ss_pred             EEEECCCCCEEEEEcCCCeEEEEECcccc
Confidence            99999999998887  4588999988654

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=2.6e-37  Score=289.57  Aligned_cols=253  Identities=19%  Similarity=0.203  Sum_probs=213.6

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      ..++..+.+|...|.+++|+|++ .+|+||+.|++|++||+.+++                                   
T Consensus        55 ~~~~~~~~~h~~~v~~~~~s~dg-~~l~s~s~D~~v~~wd~~~~~-----------------------------------   98 (319)
T 3frx_A           55 GVPVRSFKGHSHIVQDCTLTADG-AYALSASWDKTLRLWDVATGE-----------------------------------   98 (319)
T ss_dssp             EEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE-----------------------------------
T ss_pred             cccceEEeCCcccEEEEEECCCC-CEEEEEeCCCEEEEEECCCCC-----------------------------------
Confidence            34677899999999999999999 899999999999999998743                                   


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                                                                 ....+.+|.+.|.+++|+|++ .+|++|+.|++|++|
T Consensus        99 -------------------------------------------~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vw  134 (319)
T 3frx_A           99 -------------------------------------------TYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVW  134 (319)
T ss_dssp             -------------------------------------------EEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEEEE
T ss_pred             -------------------------------------------eeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEE
Confidence                                                       111356899999999999988 899999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCC-----CCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTA-----QNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW  268 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-----~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~  268 (490)
                      |++. +.+       ..+.+|...|.++.|.|..     ..++++++.|+.|++||+++++....+.+|...|.+++|+|
T Consensus       135 d~~~-~~~-------~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp  206 (319)
T 3frx_A          135 TIKG-QCL-------ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASP  206 (319)
T ss_dssp             ETTS-CEE-------EEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECT
T ss_pred             ECCC-CeE-------EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcC
Confidence            9853 222       2356799999999999853     23899999999999999999999999999999999999999


Q ss_pred             CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe----
Q psy17682        269 DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE----  344 (490)
Q Consensus       269 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~----  344 (490)
                      ++++|++++.||+|++||+++++.+..+..+.  .+.+++|+|++.+++++.    +..+++|++...........    
T Consensus       207 ~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~v~~~~~sp~~~~la~~~----~~~i~v~~~~~~~~~~~~~~~~~~  280 (319)
T 3frx_A          207 DGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD--EVFSLAFSPNRYWLAAAT----ATGIKVFSLDPQYLVDDLRPEFAG  280 (319)
T ss_dssp             TSSEEEEEETTCEEEEEETTTTEEEEEEECCS--CEEEEEECSSSSEEEEEE----TTEEEEEEETTEEEEEEECCCCTT
T ss_pred             CCCEEEEEeCCCeEEEEECCCCcEEEEecCCC--cEEEEEEcCCCCEEEEEc----CCCcEEEEeCcCeeeeccCccccc
Confidence            99999999999999999999999888887543  499999999999999987    45699999876432111110    


Q ss_pred             --ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        345 --LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       345 --~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                        ..+...+.+++|+|||++| ++|+.||.|++||+.++
T Consensus       281 ~~~~~~~~v~~~~~spdg~~l-~sg~~Dg~i~vWd~~t~  318 (319)
T 3frx_A          281 YSKAAEPHAVSLAWSADGQTL-FAGYTDNVIRVWQVMTA  318 (319)
T ss_dssp             CCGGGCCCEEEEEECTTSSEE-EEEETTSCEEEEEEEEC
T ss_pred             cccCcCcceeEEEECCCCCEE-EEeecCceEEEEEEeec
Confidence              1234568899999999999 78999999999999764

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=1.9e-37  Score=296.04  Aligned_cols=297  Identities=13%  Similarity=0.173  Sum_probs=234.8

Q ss_pred             EecccccceeeeEEeccC---CCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         38 VDLLYHQRRVGLVLWHPT---AQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        38 ~~l~gH~~~V~~v~~~p~---~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      ..+.+|.+.|++++|+|.   +...+++++.++.|++||+.++...                  ..              
T Consensus        12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~------------------~~--------------   59 (366)
T 3k26_A           12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEI------------------RL--------------   59 (366)
T ss_dssp             EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCE------------------EE--------------
T ss_pred             EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEE------------------Ee--------------
Confidence            456699999999999995   4466777777789999999864310                  00              


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCC---CCEEEEEeCCCcEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHD---DNVIASGSEDCVVK  191 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~---~~~l~s~~~dg~i~  191 (490)
                                              +..+                 ....|...|.+++|+|++   +.+|++|+.||.|+
T Consensus        60 ------------------------~~~~-----------------~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~   98 (366)
T 3k26_A           60 ------------------------LQSY-----------------VDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIR   98 (366)
T ss_dssp             ------------------------EEEE-----------------ECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEE
T ss_pred             ------------------------eeec-----------------cccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEE
Confidence                                    0000                 011477899999999983   16999999999999


Q ss_pred             EEECCCCCcccccccceeeecccccCEEEEEEee-CCCCEEEEEeCCCcEEEEECCCCeeEEEE---ecCCCcEEEEEEc
Q psy17682        192 VWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP-TAQNVLLTAGSDNNVAIWNVGTGEIMIQI---ECHPDIVYSASWN  267 (490)
Q Consensus       192 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---~~~~~~v~~~~~~  267 (490)
                      +||+.+++.+..       +.+|...|.+++|+| ++ .+|++++.||.|++||+++++.+..+   ..|...|.+++|+
T Consensus        99 v~d~~~~~~~~~-------~~~~~~~i~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~  170 (366)
T 3k26_A           99 IINPITMQCIKH-------YVGHGNAINELKFHPRDP-NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYD  170 (366)
T ss_dssp             EECTTTCCEEEE-------EESCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEEC
T ss_pred             EEEchhceEeee-------ecCCCCcEEEEEECCCCC-CEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEEC
Confidence            999988876554       456999999999999 66 59999999999999999999998888   6799999999999


Q ss_pred             CCCCEEEEEeCCCeEEEEeCCCCceeeeeee----------------------------cCCCceeEEEEeCCCcEEEEE
Q psy17682        268 WDGSKLLTTCKDKKMRIINPRTGAIEEEAVC----------------------------HEGSKATRAIYLKSGLIFTTG  319 (490)
Q Consensus       268 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----------------------------~~~~~~~~~~~s~~~~~l~~~  319 (490)
                      |++++|++++.||.|++||+++++....+..                            |... +.++.|+  +.+++++
T Consensus       171 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~--~~~l~~~  247 (366)
T 3k26_A          171 LLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNY-VDCVRWL--GDLILSK  247 (366)
T ss_dssp             TTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSC-CCEEEEE--TTEEEEE
T ss_pred             CCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcce-EEEEEEc--CCEEEEE
Confidence            9999999999999999999998765443332                            5554 8999998  7788888


Q ss_pred             eCCCceeEEEEecCCCCCCC------------eEEEeccCCCceeeeeecCC--CCeEEEEecCCCeEEEEEecCCCCee
Q psy17682        320 FSKMSERQYSLRAPDHLDEP------------IVMVELDTSNGVMFPLYDPD--TNLVYLCGKGDSVIRYFEITAEPPFV  385 (490)
Q Consensus       320 ~~~~~~~~i~iwd~~~~~~~------------~~~~~~~~~~~i~~~~~s~~--~~~l~~~g~~dg~i~iwd~~~~~~~~  385 (490)
                      +   .++.|++||+.+....            .......+...|..++|+|+  +++| ++|+.||.|++||+.++++..
T Consensus       248 ~---~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l-~~~~~dg~i~vwd~~~~~~~~  323 (366)
T 3k26_A          248 S---CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKML-ALGNQVGKLYVWDLEVEDPHK  323 (366)
T ss_dssp             C---SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEE-EEECTTSCEEEEECCSSSGGG
T ss_pred             e---cCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEE-EEEecCCcEEEEECCCCCCcc
Confidence            8   6899999999876541            12222346667999999999  9998 789999999999999987443


Q ss_pred             EEeeeeeC---CCceeeEEEeeCceeEEeec--ceeEEEEec
Q psy17682        386 HYINTFQT---PDPQRGIGMMPKRGCDVNSC--EIGRFFRLN  422 (490)
Q Consensus       386 ~~~~~~~~---~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~  422 (490)
                      .....+..   ..+|++++|+|++.++++++  +.+++|++.
T Consensus       324 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  365 (366)
T 3k26_A          324 AKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL  365 (366)
T ss_dssp             CEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             ccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence            23323332   57899999999999988874  478899875

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=5.2e-36  Score=296.05  Aligned_cols=327  Identities=13%  Similarity=0.185  Sum_probs=258.3

Q ss_pred             eccCCCCCcEEeccccccee-eeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCC
Q psy17682         28 FSPRTLTEPVVDLLYHQRRV-GLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGG  106 (490)
Q Consensus        28 ~~~~~~~~~~~~l~gH~~~V-~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (490)
                      |...........+.+|...| .++.++  + .+|++|+.||+|++||+.+++.                  ...+.    
T Consensus       105 w~~~~~~~~~~~l~~h~~~v~~~~~~~--~-~~l~sgs~dg~i~vwd~~~~~~------------------~~~~~----  159 (464)
T 3v7d_B          105 WYNPKFVPQRTTLRGHMTSVITCLQFE--D-NYVITGADDKMIRVYDSINKKF------------------LLQLS----  159 (464)
T ss_dssp             HHCTTCCCEEEEEECCSSSCEEEEEEE--T-TEEEEEETTSCEEEEETTTTEE------------------EEEEC----
T ss_pred             hcCCCcCcceEEEcCCCCCcEEEEEEC--C-CEEEEEcCCCcEEEEECCCCcE------------------EEEEe----
Confidence            33445556778899999885 666664  4 7899999999999999987641                  11111    


Q ss_pred             CcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECC--CCCCEEEEE
Q psy17682        107 ANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSP--HDDNVIASG  184 (490)
Q Consensus       107 ~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p--~~~~~l~s~  184 (490)
                       .+...|.+++|+++.      .+++++.+|.+++|++.     .+   .....+.+|.+.|.+++|++  ++ .++++|
T Consensus       160 -~h~~~V~~l~~~~~~------~l~s~s~dg~i~vwd~~-----~~---~~~~~~~~h~~~v~~l~~~~~~~~-~~l~s~  223 (464)
T 3v7d_B          160 -GHDGGVWALKYAHGG------ILVSGSTDRTVRVWDIK-----KG---CCTHVFEGHNSTVRCLDIVEYKNI-KYIVTG  223 (464)
T ss_dssp             -CCSSCEEEEEECSTT------EEEEEETTSCEEEEETT-----TT---EEEEEECCCSSCEEEEEEEESSSC-EEEEEE
T ss_pred             -CCCcCEEEEEEcCCC------EEEEEeCCCCEEEEECC-----CC---cEEEEECCCCCccEEEEEecCCCC-CEEEEE
Confidence             134468999999874      68889999999999985     22   24567789999999999984  55 899999


Q ss_pred             eCCCcEEEEECCCCCccccccc----------------ceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC
Q psy17682        185 SEDCVVKVWQIPDGGISRTLTE----------------PVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG  248 (490)
Q Consensus       185 ~~dg~i~iwd~~~~~~~~~~~~----------------~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~  248 (490)
                      +.||+|++||+.++........                ....+.+|...|.++  ++++. ++++|+.|+.|++||++++
T Consensus       224 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~-~l~~~~~d~~i~vwd~~~~  300 (464)
T 3v7d_B          224 SRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGN-IVVSGSYDNTLIVWDVAQM  300 (464)
T ss_dssp             ETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETT-EEEEEETTSCEEEEETTTT
T ss_pred             cCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCC-EEEEEeCCCeEEEEECCCC
Confidence            9999999999988765432211                134567788888887  56664 9999999999999999999


Q ss_pred             eeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEE
Q psy17682        249 EIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQY  328 (490)
Q Consensus       249 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i  328 (490)
                      +.+..+.+|...|.+++|+|+++++++++.||.|++||+++++++..+.+|... +.++.|+  +.++++++   .|+.|
T Consensus       301 ~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~-v~~~~~~--~~~l~s~s---~dg~v  374 (464)
T 3v7d_B          301 KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL-VGLLRLS--DKFLVSAA---ADGSI  374 (464)
T ss_dssp             EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSC-EEEEEEC--SSEEEEEE---TTSEE
T ss_pred             cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCc-EEEEEEc--CCEEEEEe---CCCcE
Confidence            999999999999999999999999999999999999999999999999888875 8999987  57888888   68999


Q ss_pred             EEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCcee
Q psy17682        329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGC  408 (490)
Q Consensus       329 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~  408 (490)
                      ++||+.+...   .....+...+..++|+|+++++ ++|+ ||.|++||+.+++.+....  ..+...|.+++|+++ .+
T Consensus       375 ~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~l-~~~~-dg~i~iwd~~~g~~~~~~~--~~~~~~v~~v~~~~~-~l  446 (464)
T 3v7d_B          375 RGWDANDYSR---KFSYHHTNLSAITTFYVSDNIL-VSGS-ENQFNIYNLRSGKLVHANI--LKDADQIWSVNFKGK-TL  446 (464)
T ss_dssp             EEEETTTCCE---EEEEECTTCCCEEEEEECSSEE-EEEE-TTEEEEEETTTCCEEESCT--TTTCSEEEEEEEETT-EE
T ss_pred             EEEECCCCce---eeeecCCCCccEEEEEeCCCEE-EEec-CCeEEEEECCCCcEEehhh--ccCCCcEEEEEecCC-EE
Confidence            9999997653   2333455667888999999988 6776 8999999999998332112  345678999999843 44


Q ss_pred             EEee
Q psy17682        409 DVNS  412 (490)
Q Consensus       409 l~~~  412 (490)
                      ++++
T Consensus       447 ~~~~  450 (464)
T 3v7d_B          447 VAAV  450 (464)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            4444

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=1.8e-36  Score=286.93  Aligned_cols=254  Identities=18%  Similarity=0.190  Sum_probs=207.1

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      .+...+.+|...|++++|+|++ .+|+||+.|++|++||+.++.                                    
T Consensus        67 ~~~~~l~~h~~~V~~~~~~~~~-~~l~s~s~D~~v~lwd~~~~~------------------------------------  109 (343)
T 2xzm_R           67 IPHKALTGHNHFVSDLALSQEN-CFAISSSWDKTLRLWDLRTGT------------------------------------  109 (343)
T ss_dssp             EEEEEECCCSSCEEEEEECSST-TEEEEEETTSEEEEEETTSSC------------------------------------
T ss_pred             cccchhccCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCc------------------------------------
Confidence            4567899999999999999999 899999999999999998743                                    


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                                                                ....+.+|.+.|.+++|+|++ .+|++|+.|++|++||
T Consensus       110 ------------------------------------------~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd  146 (343)
T 2xzm_R          110 ------------------------------------------TYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWN  146 (343)
T ss_dssp             ------------------------------------------EEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEE
T ss_pred             ------------------------------------------EEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEe
Confidence                                                      111356899999999999998 8999999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCC---------CEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEE
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQ---------NVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSAS  265 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~---------~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~  265 (490)
                      +... ......    ...+|...|.+++|+|++.         .+|++++.|+.|++||. ..+....+.+|...|.+++
T Consensus       147 ~~~~-~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~  220 (343)
T 2xzm_R          147 ILGE-CKFSSA----EKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLS  220 (343)
T ss_dssp             SSSC-EEEECC----TTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEE
T ss_pred             ccCC-ceeeee----cccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEE
Confidence            8732 211111    1235889999999999862         48999999999999994 5677788889999999999


Q ss_pred             EcCCCCEEEEEeCCCeEEEEeCCCC-ceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe
Q psy17682        266 WNWDGSKLLTTCKDKKMRIINPRTG-AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE  344 (490)
Q Consensus       266 ~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~  344 (490)
                      |+|++++|++++.||.|++||++.. .....+. +.. .+.+++|+|++.+++++.    ++.+++||+.+.........
T Consensus       221 ~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~-~v~~v~~sp~~~~la~~~----d~~v~iw~~~~~~~~~~~~~  294 (343)
T 2xzm_R          221 ISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-AGS-TINQIAFNPKLQWVAVGT----DQGVKIFNLMTQSKAPVCTI  294 (343)
T ss_dssp             ECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CSS-CEEEEEECSSSCEEEEEE----SSCEEEEESSSCCSCSEEEC
T ss_pred             ECCCCCEEEEEcCCCeEEEEECCCCcccceeec-CCC-cEEEEEECCCCCEEEEEC----CCCEEEEEeCCCCCCceEEe
Confidence            9999999999999999999999544 3444432 333 499999999999998775    77899999987654321111


Q ss_pred             -----------ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        345 -----------LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       345 -----------~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                                 ..|...+.+++|+|+|++| ++|+.||.|++|++.++
T Consensus       295 ~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l-~sg~~Dg~v~~w~~~~g  341 (343)
T 2xzm_R          295 EAEPITKAEGQKGKNPQCTSLAWNALGKKL-FAGFTDGVIRTFSFETS  341 (343)
T ss_dssp             CCCSGGGBTTBCCSCCCEEEEEECSSSCCE-EEEETTSEEEEEEEEEE
T ss_pred             ecCcchhhhhhcCCCCceEEEEECCCCCeE-EEecCCceEEEEEEEcc
Confidence                       1355679999999999998 78999999999999765

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-36  Score=320.40  Aligned_cols=215  Identities=12%  Similarity=0.097  Sum_probs=172.0

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      .....||.+.|++++|+|++ .+||+|+.||+|+||+....+                  ......      ....|.++
T Consensus        10 ~~~~~gh~~~V~~lafspdg-~~lAsgs~Dg~I~lw~~~~~~------------------~~~~~~------~~~~V~~l   64 (902)
T 2oaj_A           10 ETNKYGMSSKPIAAAFDFTQ-NLLAIATVTGEVHIYGQQQVE------------------VVIKLE------DRSAIKEM   64 (902)
T ss_dssp             EEEEEECSSCEEEEEEETTT-TEEEEEETTSEEEEECSTTCE------------------EEEECS------SCCCEEEE
T ss_pred             cccccCCCCCcEEEEECCCC-CEEEEEeCCCEEEEEeCCCcE------------------EEEEcC------CCCCEEEE
Confidence            34466999999999999999 899999999999999976533                  111111      12368999


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP  196 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~  196 (490)
                      +|+|.   +   .+++++.++.|++|++.     .+   ..+..+. |.+.|++++|+|++ .+|++|+.||+|++||++
T Consensus        65 ~fspg---~---~L~S~s~D~~v~lWd~~-----~~---~~~~~~~-~~~~V~~v~~sp~g-~~l~sgs~dg~V~lwd~~  128 (902)
T 2oaj_A           65 RFVKG---I---YLVVINAKDTVYVLSLY-----SQ---KVLTTVF-VPGKITSIDTDASL-DWMLIGLQNGSMIVYDID  128 (902)
T ss_dssp             EEETT---T---EEEEEETTCEEEEEETT-----TC---SEEEEEE-CSSCEEEEECCTTC-SEEEEEETTSCEEEEETT
T ss_pred             EEcCC---C---EEEEEECcCeEEEEECC-----CC---cEEEEEc-CCCCEEEEEECCCC-CEEEEEcCCCcEEEEECC
Confidence            99993   1   57788999999999985     22   2334443 77899999999998 899999999999999998


Q ss_pred             CCCcccccccce-----eeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecC--------------
Q psy17682        197 DGGISRTLTEPV-----VDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH--------------  257 (490)
Q Consensus       197 ~~~~~~~~~~~~-----~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~--------------  257 (490)
                      +++.. .+..+.     ..+.+|.+.|.+++|+|++...+++|+.|+.| +||+++++.+..+..|              
T Consensus       129 ~~~~~-~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~  206 (902)
T 2oaj_A          129 RDQLS-SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKT  206 (902)
T ss_dssp             TTEEE-EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCT
T ss_pred             CCccc-cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCccccccc
Confidence            77642 110000     12467999999999999754589999999999 9999999988888765              


Q ss_pred             ----CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee
Q psy17682        258 ----PDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEE  294 (490)
Q Consensus       258 ----~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  294 (490)
                          ...|.+++|+|+|++|++++.||+|++||+++++++.
T Consensus       207 ~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~  247 (902)
T 2oaj_A          207 NEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM  247 (902)
T ss_dssp             TSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred             ccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence                4679999999999999999999999999998776543

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=9.6e-37  Score=290.28  Aligned_cols=305  Identities=14%  Similarity=0.128  Sum_probs=235.1

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeC---CCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGK---EAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST  112 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~---D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (490)
                      ....+.+|.+.|++++|+|++..++++|+.   |+.|++||+.++....                ....      .....
T Consensus        10 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~----------------~~~~------~~~~~   67 (357)
T 3i2n_A           10 IAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKL----------------LREI------EKAKP   67 (357)
T ss_dssp             EEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEE----------------EEEE------EESSC
T ss_pred             hhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccc----------------eeee------cccCc
Confidence            344568899999999999999677777876   9999999998765210                1111      12346


Q ss_pred             CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEE------CCCCCCEEEEEeC
Q psy17682        113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAW------SPHDDNVIASGSE  186 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~------~p~~~~~l~s~~~  186 (490)
                      +.+++|+|+..+  ...+++++.+|.+++|++..     ++  .....+.+|.+.|.+++|      +|++ .+|++++.
T Consensus        68 v~~~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~-----~~--~~~~~~~~~~~~v~~~~~~~~~~~s~~~-~~l~~~~~  137 (357)
T 3i2n_A           68 IKCGTFGATSLQ--QRYLATGDFGGNLHIWNLEA-----PE--MPVYSVKGHKEIINAIDGIGGLGIGEGA-PEIVTGSR  137 (357)
T ss_dssp             EEEEECTTCCTT--TCCEEEEETTSCEEEECTTS-----CS--SCSEEECCCSSCEEEEEEESGGGCC-CC-CEEEEEET
T ss_pred             EEEEEEcCCCCC--CceEEEecCCCeEEEEeCCC-----CC--ccEEEEEecccceEEEeeccccccCCCc-cEEEEEeC
Confidence            889999997210  13577789999999999862     11  245677899999999955      6777 89999999


Q ss_pred             CCcEEEEECCCCC-cccccccceeeecc-cccCEEEEE----EeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCc
Q psy17682        187 DCVVKVWQIPDGG-ISRTLTEPVVDLLY-HQRRVGLVL----WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDI  260 (490)
Q Consensus       187 dg~i~iwd~~~~~-~~~~~~~~~~~~~~-~~~~v~~~~----~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~  260 (490)
                      ||.|++||+.+++ ....+..    ..+ +...+.+++    |+|++. ++++++.|+.|++||+++++.... ..|...
T Consensus       138 d~~i~vwd~~~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~  211 (357)
T 3i2n_A          138 DGTVKVWDPRQKDDPVANMEP----VQGENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNMALRWE-TNIKNG  211 (357)
T ss_dssp             TSCEEEECTTSCSSCSEEECC----CTTSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTTTEEEEE-EECSSC
T ss_pred             CCeEEEEeCCCCCCcceeccc----cCCCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEECccCceeee-cCCCCc
Confidence            9999999998876 3333321    111 133789998    678885 999999999999999999887554 458899


Q ss_pred             EEEEEEcC---CCCEEEEEeCCCeEEEEeCCCCceeeeee-----ecCCCceeEEEEeCCCc-EEEEEeCCCceeEEEEe
Q psy17682        261 VYSASWNW---DGSKLLTTCKDKKMRIINPRTGAIEEEAV-----CHEGSKATRAIYLKSGL-IFTTGFSKMSERQYSLR  331 (490)
Q Consensus       261 v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~~~~~~~~~~~~s~~~~-~l~~~~~~~~~~~i~iw  331 (490)
                      |.+++|+|   ++++|++++.||.|++||+++++....+.     .|... +.+++|+|++. ++++++   .++.|++|
T Consensus       212 v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~---~dg~i~iw  287 (357)
T 3i2n_A          212 VCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKST-VWQVRHLPQNRELFLTAG---GAGGLHLW  287 (357)
T ss_dssp             EEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSC-EEEEEEETTEEEEEEEEE---TTSEEEEE
T ss_pred             eEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCC-EEEEEECCCCCcEEEEEe---CCCcEEEe
Confidence            99999999   89999999999999999999877655554     67664 99999999998 888888   68999999


Q ss_pred             cCCCCCCC-----------------eEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        332 APDHLDEP-----------------IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       332 d~~~~~~~-----------------~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      |++.....                 .......|...|.+++|+|++++|+++++.||.|++||+.+.+
T Consensus       288 d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~  355 (357)
T 3i2n_A          288 KYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN  355 (357)
T ss_dssp             EEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred             ecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence            99865433                 1222335677899999999999995589999999999998764

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=1.8e-36  Score=286.60  Aligned_cols=261  Identities=18%  Similarity=0.213  Sum_probs=219.7

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK  104 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (490)
                      +..|+..+ ...+..+.+|...|.+++|+|++ .+|++|+.|+.|++|++.+....                        
T Consensus        79 v~iWd~~~-~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~v~iw~~~~~~~~------------------------  132 (340)
T 1got_B           79 LIIWDSYT-TNKVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIYNLKTREGN------------------------  132 (340)
T ss_dssp             EEEEETTT-CCEEEEEECSSSCEEEEEECTTS-SEEEEEETTCEEEEEETTTCSBS------------------------
T ss_pred             EEEEECCC-CCcceEeecCCccEEEEEECCCC-CEEEEEeCCCeEEEEECccCCCc------------------------
Confidence            44455433 34567788999999999999999 89999999999999998763200                        


Q ss_pred             CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE
Q psy17682        105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG  184 (490)
Q Consensus       105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~  184 (490)
                                                                        ......+.+|.+.|.++.|++++  .++++
T Consensus       133 --------------------------------------------------~~~~~~~~~h~~~v~~~~~~~~~--~l~s~  160 (340)
T 1got_B          133 --------------------------------------------------VRVSRELAGHTGYLSCCRFLDDN--QIVTS  160 (340)
T ss_dssp             --------------------------------------------------CEEEEEEECCSSCEEEEEEEETT--EEEEE
T ss_pred             --------------------------------------------------ceeEEEecCCCccEEEEEECCCC--cEEEE
Confidence                                                              00112356899999999999865  59999


Q ss_pred             eCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEE
Q psy17682        185 SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSA  264 (490)
Q Consensus       185 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~  264 (490)
                      +.|++|++||+++++....       +.+|...|.+++|+|++. ++++|+.|+.|++||+++++.+..+.+|...|.++
T Consensus       161 s~d~~i~~wd~~~~~~~~~-------~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v  232 (340)
T 1got_B          161 SGDTTCALWDIETGQQTTT-------FTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGMCRQTFTGHESDINAI  232 (340)
T ss_dssp             ETTSCEEEEETTTTEEEEE-------ECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEE
T ss_pred             ECCCcEEEEECCCCcEEEE-------EcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEE
Confidence            9999999999988865544       556999999999999985 99999999999999999999999999999999999


Q ss_pred             EEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecC-CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEE
Q psy17682        265 SWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHE-GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMV  343 (490)
Q Consensus       265 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~  343 (490)
                      +|+|++++|++++.||+|++||+++++.+..+..+. ...+.+++|+|+|++|++|+   .++.|++||+.+......  
T Consensus       233 ~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~---~d~~i~vwd~~~~~~~~~--  307 (340)
T 1got_B          233 CFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGY---DDFNCNVWDALKADRAGV--  307 (340)
T ss_dssp             EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE---TTSEEEEEETTTCCEEEE--
T ss_pred             EEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEEC---CCCeEEEEEcccCcEeeE--
Confidence            999999999999999999999999988777665322 12489999999999999998   689999999987654322  


Q ss_pred             eccCCCceeeeeecCCCCeEEEEecCCCeEEEEE
Q psy17682        344 ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFE  377 (490)
Q Consensus       344 ~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd  377 (490)
                      ...|...|.+++|+|+|++| ++|+.|+.|++||
T Consensus       308 ~~~h~~~v~~~~~s~dg~~l-~s~s~D~~i~iWd  340 (340)
T 1got_B          308 LAGHDNRVSCLGVTDDGMAV-ATGSWDSFLKIWN  340 (340)
T ss_dssp             EECCSSCEEEEEECTTSSCE-EEEETTSCEEEEC
T ss_pred             eecCCCcEEEEEEcCCCCEE-EEEcCCccEEecC
Confidence            23677889999999999998 8999999999996

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=4.8e-37  Score=297.00  Aligned_cols=313  Identities=10%  Similarity=0.010  Sum_probs=243.5

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      .....+.+|.+.|++++|+|   .+|++|+.||+|++|++.++......            .....+.     .....+.
T Consensus         7 ~~~~~~~~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~------------~~~~~~~-----~h~~~v~   66 (397)
T 1sq9_A            7 ATANAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPK------------DKSYSHF-----VHKSGLH   66 (397)
T ss_dssp             EEEEESSCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGG------------GGEEEEE-----CCTTCEE
T ss_pred             hhhhhhhhhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCcccccCC------------CcceEEe-----cCCCcEE
Confidence            34567899999999999998   68999999999999999876521100            0111111     1234688


Q ss_pred             eeEeccccc--cceEEEEEeeCCCceEEEECCCCCCCCcccC--CCCcceeecc-----cCCeeEEEEC----CCCCCE-
Q psy17682        115 EITISEDYV--KEFKEEIRKLKSQQALSILPPPSTAPNTGRI--NADHALVGGH-----KGPVLDIAWS----PHDDNV-  180 (490)
Q Consensus       115 ~~~~s~~~~--~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~--~~~~~~~~~h-----~~~V~~~~~~----p~~~~~-  180 (490)
                      +++|+|+..  ......+++++.+|.|.+|++..     ++.  ......+.+|     ...|.+++|+    |++ .+ 
T Consensus        67 ~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~  140 (397)
T 1sq9_A           67 HVDVLQAIERDAFELCLVATTSFSGDLLFYRITR-----EDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHR  140 (397)
T ss_dssp             EEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEE-----CTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEE
T ss_pred             EEEEecccccCCccccEEEEEcCCCCEEEEEccC-----CcccccccceeecccccccCCCcEEEEEEeeccCCCC-ceE
Confidence            999998710  00013677888999999999852     111  0015567788     6999999999    988 78 


Q ss_pred             EEEEeCCCcEEEEECCC------CCcccccccceeee-------cccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC
Q psy17682        181 IASGSEDCVVKVWQIPD------GGISRTLTEPVVDL-------LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT  247 (490)
Q Consensus       181 l~s~~~dg~i~iwd~~~------~~~~~~~~~~~~~~-------~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~  247 (490)
                      |++++.||.|++||+.+      ++.+..  .+...+       ..|...|.+++|+|++  ++++++.|+.|++||+++
T Consensus       141 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~  216 (397)
T 1sq9_A          141 LVATDVKGTTYIWKFHPFADESNSLTLNW--SPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELST  216 (397)
T ss_dssp             EEEEETTSCEEEEEEESSSSHHHHTTTCC--CCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTT
T ss_pred             EEEEeCCCcEEEEeCCccccccccceeec--cCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCC
Confidence            99999999999999988      555441  111123       3488899999999998  899999999999999999


Q ss_pred             CeeEEEEec---C---CCcEEEEEEcCCCCEEEEEeCC---CeEEEEeCCCCceeeeeee-------------cCCCcee
Q psy17682        248 GEIMIQIEC---H---PDIVYSASWNWDGSKLLTTCKD---KKMRIINPRTGAIEEEAVC-------------HEGSKAT  305 (490)
Q Consensus       248 ~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~-------------~~~~~~~  305 (490)
                      ++.+..+..   |   ...|.+++|+|++++|++++.|   +.|++||+++++.+..+..             |... +.
T Consensus       217 ~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~  295 (397)
T 1sq9_A          217 LRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW-VM  295 (397)
T ss_dssp             TEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC-EE
T ss_pred             CceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc-EE
Confidence            999999998   8   9999999999999999999999   9999999999999988887             7665 99


Q ss_pred             EEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec----cC---------------CCceeeeeecCCC------
Q psy17682        306 RAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL----DT---------------SNGVMFPLYDPDT------  360 (490)
Q Consensus       306 ~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~----~~---------------~~~i~~~~~s~~~------  360 (490)
                      +++|+|++.+|++++   .++.|++||+++.+....+...    .+               ...|.+++|+|++      
T Consensus       296 ~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~  372 (397)
T 1sq9_A          296 SLSFNDSGETLCSAG---WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMG  372 (397)
T ss_dssp             EEEECSSSSEEEEEE---TTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTT
T ss_pred             EEEECCCCCEEEEEe---CCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccc
Confidence            999999999999998   6899999999986543333300    33               6789999999998      


Q ss_pred             ----CeEEEEecCCCeEEEEEecCCC
Q psy17682        361 ----NLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       361 ----~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                          ++| ++|+.||.|++|++.+++
T Consensus       373 ~~~~~~l-~s~~~dg~i~iw~~~~g~  397 (397)
T 1sq9_A          373 ADLNESL-CCVCLDRSIRWFREAGGK  397 (397)
T ss_dssp             CTTSCEE-EEEETTTEEEEEEEEC--
T ss_pred             ccccceE-EEecCCCcEEEEEcCCCC
Confidence                566 889999999999998763

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-37  Score=303.08  Aligned_cols=326  Identities=13%  Similarity=0.186  Sum_probs=250.5

Q ss_pred             eeeeccCCCC--CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeeccc
Q psy17682         25 LTYFSPRTLT--EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVG  102 (490)
Q Consensus        25 ~~~~~~~~~~--~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (490)
                      +..|+.....  +++. ..+|...|++++|+|++ .+|++|+.||.|++||+.......              .....+.
T Consensus        47 v~iw~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~vw~~~~~~~~~--------------~~~~~~~  110 (416)
T 2pm9_A           47 LELWSLLAADSEKPIA-SLQVDSKFNDLDWSHNN-KIIAGALDNGSLELYSTNEANNAI--------------NSMARFS  110 (416)
T ss_dssp             CEEEESSSGGGCSCSC-CCCCSSCEEEEEECSSS-SCEEEEESSSCEEEECCSSTTSCC--------------CEEEECC
T ss_pred             EEEEEccCCCCCcEEE-EEecCCceEEEEECCCC-CeEEEEccCCeEEEeecccccccc--------------cchhhcc
Confidence            4556654432  2333 34699999999999999 899999999999999998732100              1111111


Q ss_pred             CCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCccc-CCCCcceeecccCCeeEEEECCCCCCEE
Q psy17682        103 GKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGR-INADHALVGGHKGPVLDIAWSPHDDNVI  181 (490)
Q Consensus       103 ~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~-~~~~~~~~~~h~~~V~~~~~~p~~~~~l  181 (490)
                           .+...+.+++|+|+..    ..+++++.++.|++|++......... .......+.+|...|.+++|+|+++.+|
T Consensus       111 -----~h~~~v~~~~~~~~~~----~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l  181 (416)
T 2pm9_A          111 -----NHSSSVKTVKFNAKQD----NVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVF  181 (416)
T ss_dssp             -----CSSSCCCEEEECSSST----TBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEE
T ss_pred             -----CCccceEEEEEcCCCC----CEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEE
Confidence                 1334689999998731    25777899999999999632210000 1112233568999999999999955899


Q ss_pred             EEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC---cEEEEECCCC-eeEEEEe-c
Q psy17682        182 ASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN---NVAIWNVGTG-EIMIQIE-C  256 (490)
Q Consensus       182 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg---~v~iwd~~~~-~~~~~~~-~  256 (490)
                      ++++.||.|++||+++++....+.... ...+|...|.+++|+|++..++++++.|+   .|++||++++ +++..+. +
T Consensus       182 ~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~  260 (416)
T 2pm9_A          182 ASAGSSNFASIWDLKAKKEVIHLSYTS-PNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQG  260 (416)
T ss_dssp             EEESSSSCEEEEETTTTEEEEEECCCC-CSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSC
T ss_pred             EEEcCCCCEEEEECCCCCcceEEeccc-cccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecC
Confidence            999999999999999887665543210 01223789999999999867999999998   9999999986 6777777 8


Q ss_pred             CCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCC-cEEEEEeCCCceeEEEEecCC
Q psy17682        257 HPDIVYSASWNW-DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG-LIFTTGFSKMSERQYSLRAPD  334 (490)
Q Consensus       257 ~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~~~~~~~~~~i~iwd~~  334 (490)
                      |...|.+++|+| ++++|++++.|+.|++||+++++++..+..|... +.+++|+|++ .+|++++   .|+.|++||+.
T Consensus       261 ~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~-v~~~~~s~~~~~~l~s~~---~d~~i~iw~~~  336 (416)
T 2pm9_A          261 HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNW-CFKTKFAPEAPDLFACAS---FDNKIEVQTLQ  336 (416)
T ss_dssp             CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSC-CCCEEECTTCTTEEEECC---SSSEEEEEESC
T ss_pred             ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCc-eEEEEECCCCCCEEEEEe---cCCcEEEEEcc
Confidence            999999999999 8999999999999999999999999999888775 9999999998 8999988   68999999998


Q ss_pred             CCCCCeEEEe------------c---c------------------CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        335 HLDEPIVMVE------------L---D------------------TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       335 ~~~~~~~~~~------------~---~------------------~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      ..........            +   .                  +...+..++|+|+|++| ++|+.|+.|+||++.++
T Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l-a~~~~d~~v~~w~~~~~  415 (416)
T 2pm9_A          337 NLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLV-QITPDGKGVSITNPKIS  415 (416)
T ss_dssp             CCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEE-CBCTTSSCBCCBCCCCC
T ss_pred             CCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEE-EEeCCCCeEEEEEeccC
Confidence            7654322110            0   0                  34557789999999998 88999999999999865

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=5.5e-36  Score=282.54  Aligned_cols=294  Identities=16%  Similarity=0.163  Sum_probs=240.9

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      ......+|.+.|++++|+|++ .+|++++ ||.|++||+.++.....              .. ...   .......+.+
T Consensus        43 ~~~~~~~h~~~v~~~~~~~~~-~~l~~~~-dg~i~iw~~~~~~~~~~--------------~~-~~~---~~~~~~~v~~  102 (337)
T 1gxr_A           43 RQINTLNHGEVVCAVTISNPT-RHVYTGG-KGCVKVWDISHPGNKSP--------------VS-QLD---CLNRDNYIRS  102 (337)
T ss_dssp             EEEEEECCSSCCCEEEECSSS-SEEEEEC-BSEEEEEETTSTTCCSC--------------SE-EEE---CSCTTSBEEE
T ss_pred             ccceeccCCCceEEEEEecCC-cEEEEcC-CCeEEEEECCCCCceee--------------ee-ccc---ccCCCCcEEE
Confidence            344556899999999999999 8899888 99999999987642110              00 000   0012346889


Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI  195 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~  195 (490)
                      ++|+|+.     ..+++++.++.+.+|++..     ++ ......+.+|...|.+++|+|++ .++++++.||.|++||+
T Consensus       103 ~~~~~~~-----~~l~~~~~d~~i~~~d~~~-----~~-~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~  170 (337)
T 1gxr_A          103 CKLLPDG-----CTLIVGGEASTLSIWDLAA-----PT-PRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDL  170 (337)
T ss_dssp             EEECTTS-----SEEEEEESSSEEEEEECCC-----C---EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEET
T ss_pred             EEEcCCC-----CEEEEEcCCCcEEEEECCC-----CC-cceeeecccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeC
Confidence            9999985     3567788999999999862     11 11345677899999999999988 89999999999999999


Q ss_pred             CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEE
Q psy17682        196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLT  275 (490)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  275 (490)
                      ++++....       +..|...|.+++|+|++. +|++++.|+.|++||+++++.+..+. +...+.+++|+|+++++++
T Consensus       171 ~~~~~~~~-------~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~  241 (337)
T 1gxr_A          171 HNQTLVRQ-------FQGHTDGASCIDISNDGT-KLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAV  241 (337)
T ss_dssp             TTTEEEEE-------ECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEE
T ss_pred             CCCceeee-------eecccCceEEEEECCCCC-EEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEE
Confidence            88765544       445899999999999985 99999999999999999999888876 7888999999999999999


Q ss_pred             EeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeee
Q psy17682        276 TCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPL  355 (490)
Q Consensus       276 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~  355 (490)
                      ++.++.|++||+++++.. .+..|... +..++|+|++++|++++   .++.|++||+.+.+..   ....+...+.+++
T Consensus       242 ~~~~~~i~~~~~~~~~~~-~~~~~~~~-v~~~~~~~~~~~l~~~~---~dg~i~~~~~~~~~~~---~~~~~~~~v~~~~  313 (337)
T 1gxr_A          242 GMESSNVEVLHVNKPDKY-QLHLHESC-VLSLKFAYCGKWFVSTG---KDNLLNAWRTPYGASI---FQSKESSSVLSCD  313 (337)
T ss_dssp             EETTSCEEEEETTSSCEE-EECCCSSC-EEEEEECTTSSEEEEEE---TTSEEEEEETTTCCEE---EEEECSSCEEEEE
T ss_pred             EcCCCcEEEEECCCCCeE-EEcCCccc-eeEEEECCCCCEEEEec---CCCcEEEEECCCCeEE---EEecCCCcEEEEE
Confidence            999999999999988754 45566654 99999999999999998   6899999999986532   3345678899999


Q ss_pred             ecCCCCeEEEEecCCCeEEEEEec
Q psy17682        356 YDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       356 ~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      |+|++++| ++++.||.|++|++.
T Consensus       314 ~s~~~~~l-~~~~~dg~i~iw~~~  336 (337)
T 1gxr_A          314 ISVDDKYI-VTGSGDKKATVYEVI  336 (337)
T ss_dssp             ECTTSCEE-EEEETTSCEEEEEEE
T ss_pred             ECCCCCEE-EEecCCCeEEEEEEe
Confidence            99999998 788899999999974

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.6e-36  Score=280.13  Aligned_cols=295  Identities=15%  Similarity=0.165  Sum_probs=238.0

Q ss_pred             eccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCC
Q psy17682         28 FSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGA  107 (490)
Q Consensus        28 ~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (490)
                      +++....++...+.+|.+.|++++| |++ .+|++|+.||.|++||+.++.                             
T Consensus         2 ~d~~~~~~~~~~l~~h~~~v~~~~~-~~~-~~l~s~~~dg~v~vw~~~~~~-----------------------------   50 (313)
T 3odt_A            2 IDPFTGYQLSATLKGHDQDVRDVVA-VDD-SKVASVSRDGTVRLWSKDDQW-----------------------------   50 (313)
T ss_dssp             ---CCCCEEEEEECCCSSCEEEEEE-EET-TEEEEEETTSEEEEEEESSSE-----------------------------
T ss_pred             CCccccHHHHHHhhCCCCCcEEEEe-cCC-CEEEEEEcCCcEEEEECCCCE-----------------------------
Confidence            4566666788899999999999999 888 889999999999999986532                             


Q ss_pred             cccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCC
Q psy17682        108 NRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSED  187 (490)
Q Consensus       108 ~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~d  187 (490)
                                                                       ....+..|.+.|.+++|+|++ .+|++++.|
T Consensus        51 -------------------------------------------------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d   80 (313)
T 3odt_A           51 -------------------------------------------------LGTVVYTGQGFLNSVCYDSEK-ELLLFGGKD   80 (313)
T ss_dssp             -------------------------------------------------EEEEEEECSSCEEEEEEETTT-TEEEEEETT
T ss_pred             -------------------------------------------------EEEEeecCCccEEEEEECCCC-CEEEEecCC
Confidence                                                             011345788999999999988 899999999


Q ss_pred             CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEc
Q psy17682        188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWN  267 (490)
Q Consensus       188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~  267 (490)
                      |.|++|++.......    +...+.+|...|.++.|  ++ .++++++.|+.|++||  .++.+..+..|...+.+++|+
T Consensus        81 g~i~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~--~~-~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~  151 (313)
T 3odt_A           81 TMINGVPLFATSGED----PLYTLIGHQGNVCSLSF--QD-GVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVV  151 (313)
T ss_dssp             SCEEEEETTCCTTSC----C-CEECCCSSCEEEEEE--ET-TEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEE
T ss_pred             CeEEEEEeeecCCCC----cccchhhcccCEEEEEe--cC-CEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEc
Confidence            999999987654322    22346679999999999  34 4899999999999999  677888888999999999999


Q ss_pred             C-CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc
Q psy17682        268 W-DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD  346 (490)
Q Consensus       268 ~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~  346 (490)
                      | +++.+++++.||.|++||  ..+....+.......+.+++|+|++. +++++   .++.|++||+++.+....+  ..
T Consensus       152 ~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~---~dg~i~i~d~~~~~~~~~~--~~  223 (313)
T 3odt_A          152 SFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCS---NDGLIKLVDMHTGDVLRTY--EG  223 (313)
T ss_dssp             ETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEE---TTSEEEEEETTTCCEEEEE--EC
T ss_pred             cCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEcc---CCCeEEEEECCchhhhhhh--hc
Confidence            8 899999999999999999  44566666663334599999999999 66776   6899999999986533222  25


Q ss_pred             CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-cceeEEEEecCCC
Q psy17682        347 TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-CEIGRFFRLNNSG  425 (490)
Q Consensus       347 ~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~~~~~~~~~  425 (490)
                      |...+.+++|+|++ .+ ++++.||.|++||+.+++.. ..+.  .+..+|.+++|+|++.+++++ ++.+++|++.++.
T Consensus       224 ~~~~i~~~~~~~~~-~l-~~~~~dg~v~iwd~~~~~~~-~~~~--~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~  298 (313)
T 3odt_A          224 HESFVYCIKLLPNG-DI-VSCGEDRTVRIWSKENGSLK-QVIT--LPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSR  298 (313)
T ss_dssp             CSSCEEEEEECTTS-CE-EEEETTSEEEEECTTTCCEE-EEEE--CSSSCEEEEEECTTSCEEEEETTSCEEEEESCGGG
T ss_pred             CCceEEEEEEecCC-CE-EEEecCCEEEEEECCCCcee-EEEe--ccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCCc
Confidence            67789999999999 45 68889999999999998732 2222  344689999999999876655 5588999998876

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=3.2e-36  Score=332.54  Aligned_cols=342  Identities=12%  Similarity=0.154  Sum_probs=276.7

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      ......+.+|.+.|++++|+|++ .+|++|+.||+|++||+.++..                  ...+.     .+...|
T Consensus       605 ~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~vw~~~~~~~------------------~~~~~-----~h~~~v  660 (1249)
T 3sfz_A          605 NLSRLVVRPHTDAVYHACFSQDG-QRIASCGADKTLQVFKAETGEK------------------LLDIK-----AHEDEV  660 (1249)
T ss_dssp             CCCSEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCE------------------EEEEC-----CCSSCE
T ss_pred             ccceEEEecccccEEEEEECCCC-CEEEEEeCCCeEEEEECCCCCE------------------EEEec-----cCCCCE
Confidence            44556789999999999999999 8999999999999999988651                  11111     133468


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCC-CCEEEEEeCCCcEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHD-DNVIASGSEDCVVKV  192 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~-~~~l~s~~~dg~i~i  192 (490)
                      .+++|+|+.     ..+++++.++.|++|++.     .   ......+.+|.+.|.+++|+|++ ..++++|+.||.|++
T Consensus       661 ~~~~~s~~~-----~~l~s~~~d~~v~vwd~~-----~---~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~v  727 (1249)
T 3sfz_A          661 LCCAFSSDD-----SYIATCSADKKVKIWDSA-----T---GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKL  727 (1249)
T ss_dssp             EEEEECTTS-----SEEEEEETTSEEEEEETT-----T---CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEE
T ss_pred             EEEEEecCC-----CEEEEEeCCCeEEEEECC-----C---CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEE
Confidence            899999985     367788899999999985     2   23566788999999999999953 268999999999999


Q ss_pred             EECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-----------------
Q psy17682        193 WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-----------------  255 (490)
Q Consensus       193 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-----------------  255 (490)
                      ||+.+++....       +.+|...|.+++|+|++. ++++++.||.|++||+++++....+.                 
T Consensus       728 wd~~~~~~~~~-------~~~h~~~v~~~~~sp~~~-~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  799 (1249)
T 3sfz_A          728 WDLNQKECRNT-------MFGHTNSVNHCRFSPDDE-LLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEV  799 (1249)
T ss_dssp             EETTSSSEEEE-------ECCCSSCEEEEEECSSTT-EEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCC
T ss_pred             EECCCcchhhe-------ecCCCCCEEEEEEecCCC-EEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccc
Confidence            99998876554       456999999999999995 99999999999999987765433321                 


Q ss_pred             --------------------------------------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee
Q psy17682        256 --------------------------------------CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV  297 (490)
Q Consensus       256 --------------------------------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  297 (490)
                                                            +|...|.+++|+|+++++++++.||.|++||+.++..+..+.
T Consensus       800 ~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~  879 (1249)
T 3sfz_A          800 IVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCR  879 (1249)
T ss_dssp             CBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred             eEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecC
Confidence                                                  567789999999999999999999999999999999999888


Q ss_pred             ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC----------------------------------------
Q psy17682        298 CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD----------------------------------------  337 (490)
Q Consensus       298 ~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~----------------------------------------  337 (490)
                      +|... +.+++|+|+|..+++++   .|+.+++|++....                                        
T Consensus       880 ~h~~~-v~~v~~spdg~~l~s~s---~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  955 (1249)
T 3sfz_A          880 GHLSW-VHGVMFSPDGSSFLTAS---DDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQ  955 (1249)
T ss_dssp             CCSSC-EEEEEECTTSSEEEEEE---TTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCC
T ss_pred             CCccc-eEEEEECCCCCEEEEEe---CCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcce
Confidence            88875 99999999999999988   67888888753200                                        


Q ss_pred             -------------------------------------CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        338 -------------------------------------EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       338 -------------------------------------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                                                           .........|...|.+++|+|+|+++ ++++.||.|++||+.+
T Consensus       956 ~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l-~s~~~dg~i~vwd~~~ 1034 (1249)
T 3sfz_A          956 IDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTL-ISSSEDSVIQVWNWQT 1034 (1249)
T ss_dssp             EEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCE-EEECSSSBEEEEETTT
T ss_pred             EEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEE-EEEcCCCEEEEEECCC
Confidence                                                 00011112456678999999999998 7899999999999998


Q ss_pred             CCCeeEEeeeeeCCCceeeEEEeeCceeEEee-cceeEEEEecCCCceEE
Q psy17682        381 EPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-CEIGRFFRLNNSGLCQV  429 (490)
Q Consensus       381 ~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~~~~~~~~~~~~~  429 (490)
                      ++    ......+...+.+++|+|++.+++.+ ++.+++|++.++.....
T Consensus      1035 ~~----~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 1080 (1249)
T 3sfz_A         1035 GD----YVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERD 1080 (1249)
T ss_dssp             TE----EECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEE
T ss_pred             Cc----eEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEE
Confidence            86    33344566789999999998876665 56899999988774443

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=7.8e-37  Score=289.64  Aligned_cols=258  Identities=21%  Similarity=0.302  Sum_probs=208.1

Q ss_pred             ecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEe
Q psy17682         39 DLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITI  118 (490)
Q Consensus        39 ~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  118 (490)
                      ...+|.+.|.+++|+|++ .+|++|+.|++|++|+...+..                                       
T Consensus        56 ~~~~h~~~v~~~~~sp~g-~~l~s~s~D~~v~iw~~~~~~~---------------------------------------   95 (345)
T 3fm0_A           56 LSEGHQRTVRKVAWSPCG-NYLASASFDATTCIWKKNQDDF---------------------------------------   95 (345)
T ss_dssp             ECSSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECCC-E---------------------------------------
T ss_pred             eccccCCcEEEEEECCCC-CEEEEEECCCcEEEEEccCCCe---------------------------------------
Confidence            457999999999999999 8999999999999999865320                                       


Q ss_pred             ccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC
Q psy17682        119 SEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG  198 (490)
Q Consensus       119 s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~  198 (490)
                                                           .....+.+|.+.|.+++|+|++ ++|++|+.|++|++||+.++
T Consensus        96 -------------------------------------~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~  137 (345)
T 3fm0_A           96 -------------------------------------ECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEE  137 (345)
T ss_dssp             -------------------------------------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTT
T ss_pred             -------------------------------------EEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCC
Confidence                                                 0112456899999999999988 89999999999999999876


Q ss_pred             CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe--eEEEEecCCCcEEEEEEcCCCCEEEEE
Q psy17682        199 GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE--IMIQIECHPDIVYSASWNWDGSKLLTT  276 (490)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~  276 (490)
                      ....    ....+.+|...|.+++|+|++. +|++|+.|+.|++||+++++  ....+.+|...|.+++|+|++++|+++
T Consensus       138 ~~~~----~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~  212 (345)
T 3fm0_A          138 DEYE----CVSVLNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASC  212 (345)
T ss_dssp             SCEE----EEEEECCCCSCEEEEEECSSSS-CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             CCeE----EEEEecCcCCCeEEEEECCCCC-EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEE
Confidence            5422    1234667999999999999995 89999999999999998875  446788999999999999999999999


Q ss_pred             eCCCeEEEEeCCCC---------------ceeeeeee-cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCC-
Q psy17682        277 CKDKKMRIINPRTG---------------AIEEEAVC-HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEP-  339 (490)
Q Consensus       277 ~~dg~i~iwd~~~~---------------~~~~~~~~-~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~-  339 (490)
                      +.|++|++||....               +++..+.+ |.. .+..++|+|++..|++++   .|+.|++|+......+ 
T Consensus       213 s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~v~~~~~~~~l~s~~---~d~~i~vw~~~~~~~~~  288 (345)
T 3fm0_A          213 SDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSR-TIYDIAWCQLTGALATAC---GDDAIRVFQEDPNSDPQ  288 (345)
T ss_dssp             ETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSS-CEEEEEECTTTCCEEEEE---TTSCEEEEEECTTSCTT
T ss_pred             eCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCC-cEEEEEEecCCCEEEEEe---CCCeEEEEEeCCCCCcc
Confidence            99999999996432               12333444 444 599999999999999998   6889999998754321 


Q ss_pred             ---eEE--E-eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682        340 ---IVM--V-ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP  383 (490)
Q Consensus       340 ---~~~--~-~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~  383 (490)
                         ...  . ...|...|.+++|+|++..++++|+.||.|++|++.++++
T Consensus       289 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~  338 (345)
T 3fm0_A          289 QPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEG  338 (345)
T ss_dssp             SCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC---
T ss_pred             eeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCC
Confidence               111  1 1256778999999999864458999999999999998873

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.1e-37  Score=307.03  Aligned_cols=351  Identities=8%  Similarity=-0.013  Sum_probs=242.2

Q ss_pred             CcEEecccccceeeeEEeccCCC--------ceE-------------------EeeeCCCeEEEEeCCCCCCCCCCCccc
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQ--------NVL-------------------LTAGKEAEPILISLKDGYIPPSEKSKS   87 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~--------~~l-------------------~s~~~D~~v~iWd~~~~~~~~~~~~~~   87 (490)
                      ........+.+.|.+|+|+|++.        .+|                   +|++.|++|+||++.++....      
T Consensus       124 ~r~~~~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~------  197 (524)
T 2j04_B          124 KRRGFIYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHC------  197 (524)
T ss_dssp             CSCEEEEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCE------
T ss_pred             CcceEEEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCc------
Confidence            33343444788999999999861        344                   446688999999987654210      


Q ss_pred             cceeccccceeecccCCCCCcccccCCeeEecccccc-ceEEEEEeeCCCceEEEECCCCCCCCcc---cCCCCcceeec
Q psy17682         88 ALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVK-EFKEEIRKLKSQQALSILPPPSTAPNTG---RINADHALVGG  163 (490)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~~~~~~~~~~~~g~i~v~~~~~~~~~~~---~~~~~~~~~~~  163 (490)
                              .....+.+     ....+..++|+|+... .....+++++.||.|++|++........   ........+.+
T Consensus       198 --------~~~~~l~~-----~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~  264 (524)
T 2j04_B          198 --------VKVQTIVH-----SFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSL  264 (524)
T ss_dssp             --------EEEEEEEE-----CCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECC
T ss_pred             --------eEEEEEEe-----cCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEc
Confidence                    00010111     1225788999997210 0124688899999999999963221100   11223456789


Q ss_pred             ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEE--EEeeCCCCEEEEEeCCCcEE
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLV--LWHPTAQNVLLTAGSDNNVA  241 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~p~~~~~l~s~~~dg~v~  241 (490)
                      |...|++++|+|+  ..|++|+.||+|++||++++..      +...+.+|...|.++  .|+|++.++|++|+.|++|+
T Consensus       265 h~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~~~------~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvk  336 (524)
T 2j04_B          265 ADSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDPEV------PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFY  336 (524)
T ss_dssp             TTTCEEEEEESSS--SEEEEEETTSEEEEEETTBCSS------CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEE
T ss_pred             CCCCEEEEEecCC--CeEEEEeCCCEEEEEECCCCCC------ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEE
Confidence            9999999999984  4899999999999999987632      223356799999999  56777635999999999999


Q ss_pred             EEECCCCeeEEEEecCCC--cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682        242 IWNVGTGEIMIQIECHPD--IVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG  319 (490)
Q Consensus       242 iwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~  319 (490)
                      |||+++++.+..+.+|..  .|.+++|+|+++.+++++.|++|++||++++.++.++.+|.+. +.+++|+|+|.+|++|
T Consensus       337 lWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~-V~sva~Sp~g~~l~Sg  415 (524)
T 2j04_B          337 IFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETT-ITAIGVSRLHPMVLAG  415 (524)
T ss_dssp             EECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSC-EEEEECCSSCCBCEEE
T ss_pred             EEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCc-eEEEEeCCCCCeEEEE
Confidence            999998887766766643  5889999999999999999999999999999988888888876 9999999999999999


Q ss_pred             eCCCceeEEEEecCCCCCCCeEEE---eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEec-CCCCeeEEeeeeeCCC
Q psy17682        320 FSKMSERQYSLRAPDHLDEPIVMV---ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT-AEPPFVHYINTFQTPD  395 (490)
Q Consensus       320 ~~~~~~~~i~iwd~~~~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~-~~~~~~~~~~~~~~~~  395 (490)
                      +   .|++|++||+.... .....   .......+..++|+|+++.+ . ...+  +.+|+.. ++. .  ......+..
T Consensus       416 s---~Dgtv~lwd~~~~~-~~~~~~~~~~~~~~~v~~v~~sp~g~~~-~-~~~~--~~~~~~~~~g~-~--~~~l~gh~~  484 (524)
T 2j04_B          416 S---ADGSLIITNAARRL-LHGIKNSSATQKSLRLWKWDYSIKDDKY-R-IDSS--YEVYPLTVNDV-S--KAKIDAHGI  484 (524)
T ss_dssp             E---TTTEEECCBSCSST-TTCC------CCCCEEEECBCCSSSCEE-E-ECCC--CCCCC----------------CCC
T ss_pred             E---CCCEEEEEechHhh-ccccccCccceeeeEEEEeccCCCCCeE-E-ccCC--ceecccccCCc-c--eeeecCCCc
Confidence            8   79999999987532 11111   01122247799999999855 2 2222  3344333 222 1  122234567


Q ss_pred             ceeeEEEeeCce---eEEee--cceeEEEEecCC
Q psy17682        396 PQRGIGMMPKRG---CDVNS--CEIGRFFRLNNS  424 (490)
Q Consensus       396 ~i~~~~~sp~~~---~l~~~--~~~~~~~~~~~~  424 (490)
                      +|.+|+|+|++.   +++++  ++.+|+|++...
T Consensus       485 ~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~  518 (524)
T 2j04_B          485 NITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE  518 (524)
T ss_dssp             SCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred             eEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence            999999999964   77777  458999998754

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-36  Score=286.61  Aligned_cols=273  Identities=17%  Similarity=0.258  Sum_probs=199.8

Q ss_pred             eeeeccCCCC-CcEEec-cc-ccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecc
Q psy17682         25 LTYFSPRTLT-EPVVDL-LY-HQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKV  101 (490)
Q Consensus        25 ~~~~~~~~~~-~~~~~l-~g-H~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (490)
                      +..|+..... .....+ .+ |.+.|.+++|+|++ .+|++|+.|++|+|||+.......                    
T Consensus        36 i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~las~s~D~~v~iw~~~~~~~~~--------------------   94 (330)
T 2hes_X           36 IKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHT-SLLAAGSFDSTVSIWAKEESADRT--------------------   94 (330)
T ss_dssp             EEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTS-SEEEEEETTSCEEEEEC---------------------------
T ss_pred             EEEEEecCCCeEEEEEEecCCccCCEEEEEECCCC-CEEEEEeCCCcEEEEEcccCcCcc--------------------
Confidence            4445554322 233344 44 99999999999999 899999999999999986422000                    


Q ss_pred             cCCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEE
Q psy17682        102 GGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVI  181 (490)
Q Consensus       102 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l  181 (490)
                                                                      .   .......+.+|.+.|.+++|+|++ ++|
T Consensus        95 ------------------------------------------------~---~~~~~~~~~~h~~~V~~v~~sp~g-~~l  122 (330)
T 2hes_X           95 ------------------------------------------------F---EMDLLAIIEGHENEVKGVAWSNDG-YYL  122 (330)
T ss_dssp             ------------------------------------------------C---CCEEEEEEC----CEEEEEECTTS-CEE
T ss_pred             ------------------------------------------------c---cceeEEEEcCCCCcEEEEEECCCC-CEE
Confidence                                                            0   000123467899999999999998 899


Q ss_pred             EEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC--eeEEEEecCCC
Q psy17682        182 ASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG--EIMIQIECHPD  259 (490)
Q Consensus       182 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~--~~~~~~~~~~~  259 (490)
                      ++|+.|++|++||+.......   .....+.+|...|.+++|+|++. +|++|+.|++|++||..++  +++..+.+|..
T Consensus       123 as~s~D~~v~iwd~~~~~~~~---~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~  198 (330)
T 2hes_X          123 ATCSRDKSVWIWETDESGEEY---ECISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDDWECVAVLNGHEG  198 (330)
T ss_dssp             EEEETTSCEEEEECCTTCCCC---EEEEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTEEEEEEEECCCSS
T ss_pred             EEEeCCCEEEEEeccCCCCCe---EEEEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCCeeEEEEccCCCC
Confidence            999999999999995432111   12334667999999999999985 9999999999999998776  57788899999


Q ss_pred             cEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCC--------ceeeeeee-cCCCceeEEEEeCCCcEEEEEeCCCceeEE
Q psy17682        260 IVYSASWNWD--GSKLLTTCKDKKMRIINPRTG--------AIEEEAVC-HEGSKATRAIYLKSGLIFTTGFSKMSERQY  328 (490)
Q Consensus       260 ~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~-~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i  328 (490)
                      .|.+++|+|+  +..|++++.|++|++||++.+        .+...+.. |.. .+.+++|++++ +|++++   .|+.|
T Consensus       199 ~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~v~~s~~~-~l~s~~---~dg~v  273 (330)
T 2hes_X          199 TVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKR-QVYNVAWGFNG-LIASVG---ADGVL  273 (330)
T ss_dssp             CEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSS-CEEEEEECTTS-CEEEEE---TTSCE
T ss_pred             cEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeeccccccc-ceEEEEEcCCC-EEEEEe---CCCEE
Confidence            9999999998  678999999999999998754        23333433 555 49999999776 566676   68999


Q ss_pred             EEecCCCCCCCeEE-EeccCCC-ceeeeeecC--CCCeEEEEecCCCeEEEEEecC
Q psy17682        329 SLRAPDHLDEPIVM-VELDTSN-GVMFPLYDP--DTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       329 ~iwd~~~~~~~~~~-~~~~~~~-~i~~~~~s~--~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      ++||...+...... ....|.. .|.+++|+|  ++++| ++|+.||.|++|++..
T Consensus       274 ~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~l-as~s~Dg~v~~W~~~~  328 (330)
T 2hes_X          274 AVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTIL-ATGGDDGIVNFWSLEK  328 (330)
T ss_dssp             EEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCE-EEEETTSEEEEEEC--
T ss_pred             EEEEcCCCceEEEeccccccccceEEEEEEecCCCceEE-EEecCCCcEEEEEecc
Confidence            99998764311111 2234554 799999999  67777 8999999999999865

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=1.8e-35  Score=290.55  Aligned_cols=325  Identities=15%  Similarity=0.190  Sum_probs=257.2

Q ss_pred             CcEEeccccccee-eeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         35 EPVVDLLYHQRRV-GLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        35 ~~~~~l~gH~~~V-~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      .+...+.||.+.| .++.  +++ .+|++|+.||+|++||+.++..                  ...+.     .+...+
T Consensus       109 ~~~~~l~~h~~~v~~~~~--~~g-~~l~sg~~dg~i~vwd~~~~~~------------------~~~~~-----~h~~~v  162 (445)
T 2ovr_B          109 KSPKVLKGHDDHVITCLQ--FCG-NRIVSGSDDNTLKVWSAVTGKC------------------LRTLV-----GHTGGV  162 (445)
T ss_dssp             CCCEEEECSTTSCEEEEE--EET-TEEEEEETTSCEEEEETTTCCE------------------EEECC-----CCSSCE
T ss_pred             ceeEEecccCCCcEEEEE--EcC-CEEEEEECCCcEEEEECCCCcE------------------EEEEc-----CCCCCE
Confidence            4557799999975 5544  456 8999999999999999987651                  11111     123357


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                      .+++++++       .+++++.+|.+++|++.     .+   .....+.+|...|.+++|++   ..+++|+.||+|++|
T Consensus       163 ~~~~~~~~-------~l~s~~~dg~i~vwd~~-----~~---~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~w  224 (445)
T 2ovr_B          163 WSSQMRDN-------IIISGSTDRTLKVWNAE-----TG---ECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVW  224 (445)
T ss_dssp             EEEEEETT-------EEEEEETTSCEEEEETT-----TT---EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEE
T ss_pred             EEEEecCC-------EEEEEeCCCeEEEEECC-----cC---cEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEE
Confidence            78888754       68889999999999985     22   24567789999999999963   689999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  273 (490)
                      |+.+++....       +.+|...|.+++|  ++ .++++|+.||.|++||+++++.+..+.+|...|.+++|  ++.++
T Consensus       225 d~~~~~~~~~-------~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l  292 (445)
T 2ovr_B          225 DIETGQCLHV-------LMGHVAAVRCVQY--DG-RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHV  292 (445)
T ss_dssp             ESSSCCEEEE-------EECCSSCEEEEEE--CS-SCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEE
T ss_pred             ECCCCcEEEE-------EcCCcccEEEEEE--CC-CEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEE
Confidence            9998876554       4569999999999  45 48999999999999999999999999999999999999  78999


Q ss_pred             EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec-cCCCcee
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-DTSNGVM  352 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-~~~~~i~  352 (490)
                      ++++.||.|++||+++++.+..+..|... +.++.+  ++.++++|+   .++.|++||+++++....+... .+...|.
T Consensus       293 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-v~~~~~--~~~~l~~~~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~  366 (445)
T 2ovr_B          293 VSGSLDTSIRVWDVETGNCIHTLTGHQSL-TSGMEL--KDNILVSGN---ADSTVKIWDIKTGQCLQTLQGPNKHQSAVT  366 (445)
T ss_dssp             EEEETTSCEEEEETTTCCEEEEECCCCSC-EEEEEE--ETTEEEEEE---TTSCEEEEETTTCCEEEEECSTTSCSSCEE
T ss_pred             EEEeCCCeEEEEECCCCCEEEEEcCCccc-EEEEEE--eCCEEEEEe---CCCeEEEEECCCCcEEEEEccCCCCCCCEE
Confidence            99999999999999999999998887764 666666  467888888   6899999999876643333221 2667799


Q ss_pred             eeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEee--eeeCCCceeeEEEeeCceeEEeecce------eEEEEecCC
Q psy17682        353 FPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYIN--TFQTPDPQRGIGMMPKRGCDVNSCEI------GRFFRLNNS  424 (490)
Q Consensus       353 ~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~i~~~~~sp~~~~l~~~~~~------~~~~~~~~~  424 (490)
                      +++|+  ++++ ++|+.||.|++||+.+++.......  ...+...|.+++|+|++.++++++.+      +.+|++...
T Consensus       367 ~~~~~--~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~  443 (445)
T 2ovr_B          367 CLQFN--KNFV-ITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD  443 (445)
T ss_dssp             EEEEC--SSEE-EEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred             EEEEC--CCEE-EEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence            99996  5676 7899999999999999873322211  12455789999999999998887542      567776653

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.1e-36  Score=296.47  Aligned_cols=305  Identities=13%  Similarity=0.079  Sum_probs=233.1

Q ss_pred             CCcEEec-ccccceeeeEEecc-CCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccc
Q psy17682         34 TEPVVDL-LYHQRRVGLVLWHP-TAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNS  111 (490)
Q Consensus        34 ~~~~~~l-~gH~~~V~~v~~~p-~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (490)
                      .+++..+ .+|.+.|++++|+| ++ .+|+||+.||+|+|||+.+....                               
T Consensus        52 g~~~~~~~~~h~~~V~~~~~s~~~~-~~l~s~s~dg~v~vwd~~~~~~~-------------------------------   99 (437)
T 3gre_A           52 GKLIATLMENEPNSITSSAVSPGET-PYLITGSDQGVIKIWNLKEIIVG-------------------------------   99 (437)
T ss_dssp             CCEEEEECTTTTSCEEEEEEECSSS-CEEEEEETTSEEEEEEHHHHHTT-------------------------------
T ss_pred             ceEEeeeccCCCCceEEEEECCCCC-CEEEEecCCceEEEeECcccccC-------------------------------
Confidence            4567777 99999999999999 77 89999999999999998652100                               


Q ss_pred             cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEE
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVK  191 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~  191 (490)
                                                               ........ .+|.+.|.+++|+|++ .+|++|+.||+|+
T Consensus       100 -----------------------------------------~~~~~~~~-~~h~~~v~~~~~~~~~-~~l~s~s~dg~i~  136 (437)
T 3gre_A          100 -----------------------------------------EVYSSSLT-YDCSSTVTQITMIPNF-DAFAVSSKDGQII  136 (437)
T ss_dssp             -----------------------------------------CCCSCSEE-EECSSCEEEEEECTTS-SEEEEEETTSEEE
T ss_pred             -----------------------------------------cccceeee-ccCCCCEEEEEEeCCC-CEEEEEeCCCEEE
Confidence                                                     00000111 2589999999999987 8999999999999


Q ss_pred             EEECC---CCCccccccc-ceeeec--c--cccCEEEEE--EeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec--CCC
Q psy17682        192 VWQIP---DGGISRTLTE-PVVDLL--Y--HQRRVGLVL--WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC--HPD  259 (490)
Q Consensus       192 iwd~~---~~~~~~~~~~-~~~~~~--~--~~~~v~~~~--~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--~~~  259 (490)
                      +||+.   +++....... +...+.  .  +...+.++.  +++++ .+|++|+.|+.|++||+++++.+..+..  |..
T Consensus       137 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~  215 (437)
T 3gre_A          137 VLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK-SLLVALTNLSRVIIFDIRTLERLQIIENSPRHG  215 (437)
T ss_dssp             EEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC-EEEEEEETTSEEEEEETTTCCEEEEEECCGGGC
T ss_pred             EEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC
Confidence            99995   5544432221 111111  1  556777777  45777 4999999999999999999999999987  889


Q ss_pred             cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee-ecCCCceeEEEEe----CCCcEEEEEeCCCceeEEEEecCC
Q psy17682        260 IVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV-CHEGSKATRAIYL----KSGLIFTTGFSKMSERQYSLRAPD  334 (490)
Q Consensus       260 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~s----~~~~~l~~~~~~~~~~~i~iwd~~  334 (490)
                      .|++++|+|++++|++++.||.|++||+++++++..+. .|.. .+.+++|+    +++.+|++|+   .|+.|++||++
T Consensus       216 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~s~~~~~l~s~~---~dg~i~iwd~~  291 (437)
T 3gre_A          216 AVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHA-PITHVEVCQFYGKNSVIVVGGS---SKTFLTIWNFV  291 (437)
T ss_dssp             CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCE-EEEEEEECTTTCTTEEEEEEES---TTEEEEEEETT
T ss_pred             ceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCC-ceEEEEeccccCCCccEEEEEc---CCCcEEEEEcC
Confidence            99999999999999999999999999999999888876 4444 58999665    4688999998   79999999999


Q ss_pred             CCCCCeEEEec------------------------cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee
Q psy17682        335 HLDEPIVMVEL------------------------DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT  390 (490)
Q Consensus       335 ~~~~~~~~~~~------------------------~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~  390 (490)
                      ++.....+...                        .+...|.+++|+ ++++| ++|+.|+.|++||+.+++........
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l-~s~~~d~~i~~wd~~~~~~~~~~~~~  369 (437)
T 3gre_A          292 KGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKIL-LTDEATSSIVMFSLNELSSSKAVISP  369 (437)
T ss_dssp             TTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEE-EEEGGGTEEEEEETTCGGGCEEEECC
T ss_pred             CCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEE-EecCCCCeEEEEECCCcccceEEecc
Confidence            76644333311                        144558888999 67776 89999999999999987643222110


Q ss_pred             ----------------------------------eeCCCceeeEEEeeC--ceeEEeec--ceeEEEE
Q psy17682        391 ----------------------------------FQTPDPQRGIGMMPK--RGCDVNSC--EIGRFFR  420 (490)
Q Consensus       391 ----------------------------------~~~~~~i~~~~~sp~--~~~l~~~~--~~~~~~~  420 (490)
                                                        ..|...|++++|+++  +.++++++  +.+++|+
T Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          370 SRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             --CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred             cccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence                                              015678999999998  77888885  4677774

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.6e-36  Score=315.73  Aligned_cols=366  Identities=10%  Similarity=0.041  Sum_probs=243.0

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK  104 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (490)
                      +..|+..+. +.+..+. |.+.|++++|+|++ .+|++|+.||+|++||+.++....       ..+.   ......  .
T Consensus        81 v~lWd~~~~-~~~~~~~-~~~~V~~v~~sp~g-~~l~sgs~dg~V~lwd~~~~~~~~-------~~i~---~~~~~~--~  145 (902)
T 2oaj_A           81 VYVLSLYSQ-KVLTTVF-VPGKITSIDTDASL-DWMLIGLQNGSMIVYDIDRDQLSS-------FKLD---NLQKSS--F  145 (902)
T ss_dssp             EEEEETTTC-SEEEEEE-CSSCEEEEECCTTC-SEEEEEETTSCEEEEETTTTEEEE-------EEEC---CHHHHH--T
T ss_pred             EEEEECCCC-cEEEEEc-CCCCEEEEEECCCC-CEEEEEcCCCcEEEEECCCCcccc-------ceec---cccccc--c
Confidence            445555432 3444454 77899999999999 899999999999999998754210       0000   000000  0


Q ss_pred             CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCccee------------------ecccC
Q psy17682        105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALV------------------GGHKG  166 (490)
Q Consensus       105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~------------------~~h~~  166 (490)
                      ....+...|.+++|+|+.    ...++++..+|.+ +|++..     ++   ....+                  .+|..
T Consensus       146 ~~~~h~~~V~sl~~sp~~----~~~l~~g~~dg~v-lWd~~~-----~~---~~~~~~~~~~~g~~~~~~~~~~~~~h~~  212 (902)
T 2oaj_A          146 FPAARLSPIVSIQWNPRD----IGTVLISYEYVTL-TYSLVE-----NE---IKQSFIYELPPFAPGGDFSEKTNEKRTP  212 (902)
T ss_dssp             CSSSCCCCCCEEEEETTE----EEEEEEECSSCEE-EEETTT-----TE---EEEEECCCBCTTCCCSTTCCCTTSCBCC
T ss_pred             ccccCCCCeEEEEEccCC----CCEEEEEeCCCcE-EEECCC-----Cc---eEEEEecccCCcCCCcccccccccccCC
Confidence            111234579999999963    3467789999999 999852     11   12222                  34578


Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc--cc-----cceee-ec---ccccCEEEEEEee----CCCCEE
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT--LT-----EPVVD-LL---YHQRRVGLVLWHP----TAQNVL  231 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~-----~~~~~-~~---~~~~~v~~~~~~p----~~~~~l  231 (490)
                      .|.+++|+|+| .+|++|+.||+|++||+++++.+..  +.     .+... ..   .|...|.+++|++    ++..++
T Consensus       213 ~V~~v~fspdg-~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll  291 (902)
T 2oaj_A          213 KVIQSLYHPNS-LHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLL  291 (902)
T ss_dssp             CEEEEEECTTS-SEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEE
T ss_pred             CeEEEEEcCCC-CEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEE
Confidence            89999999998 8999999999999999988876432  10     00000 00   1234566666643    211244


Q ss_pred             EEE----------------------------------------------------------------------------e
Q psy17682        232 LTA----------------------------------------------------------------------------G  235 (490)
Q Consensus       232 ~s~----------------------------------------------------------------------------~  235 (490)
                      ++|                                                                            +
T Consensus       292 ~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s  371 (902)
T 2oaj_A          292 ISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLIL  371 (902)
T ss_dssp             EEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEE
T ss_pred             EeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEc
Confidence            444                                                                            3


Q ss_pred             CCCcEEEEECCCCeeEEE-----------------------------------------EecCCCcEEEEEEcCCCCEEE
Q psy17682        236 SDNNVAIWNVGTGEIMIQ-----------------------------------------IECHPDIVYSASWNWDGSKLL  274 (490)
Q Consensus       236 ~dg~v~iwd~~~~~~~~~-----------------------------------------~~~~~~~v~~~~~~~~~~~l~  274 (490)
                      .|+.|++||+.++.....                                         +.+|...+.+++|+|++++|+
T Consensus       372 ~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~la  451 (902)
T 2oaj_A          372 GNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFI  451 (902)
T ss_dssp             TTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEE
T ss_pred             CCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEE
Confidence            445555565544422111                                         112223333445578899999


Q ss_pred             EEeCCCeEEEEeCCCCcee--eeee---------ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCC----
Q psy17682        275 TTCKDKKMRIINPRTGAIE--EEAV---------CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEP----  339 (490)
Q Consensus       275 ~~~~dg~i~iwd~~~~~~~--~~~~---------~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~----  339 (490)
                      +|+.|++|++||+.++...  ..+.         +|... +.+++|+|+|++||+|+   .|++|++||+.+.+..    
T Consensus       452 Sgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~-V~svafspdg~~LAsgs---~DgtV~lwd~~~~~~~~~~~  527 (902)
T 2oaj_A          452 TGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELA-VDKISFAAETLELAVSI---ETGDVVLFKYEVNQFYSVEN  527 (902)
T ss_dssp             EEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCC-EEEEEEETTTTEEEEEE---TTSCEEEEEEEECCC-----
T ss_pred             EecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCc-eeEEEecCCCCeEEEEe---cCcEEEEEEecCccccCccc
Confidence            9999999999999887532  1111         45554 99999999999999999   7999999999765210    


Q ss_pred             --------------------------------------eEEE-eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        340 --------------------------------------IVMV-ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       340 --------------------------------------~~~~-~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                                                            .... ...|...|++++||||| +| |+|+.|++|++||+.+
T Consensus       528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~l-Asgs~D~tv~lwd~~~  605 (902)
T 2oaj_A          528 RPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FV-GIAYAAGSLMLIDRRG  605 (902)
T ss_dssp             ----------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EE-EEEETTSEEEEEETTT
T ss_pred             cCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EE-EEEeCCCcEEEEECCC
Confidence                                                  0111 22477889999999999 77 8999999999999877


Q ss_pred             CCCeeE-Eeeee--eCCCceeeEEEe-----eCc---eeEEee--cceeEEEEe---cCCC
Q psy17682        381 EPPFVH-YINTF--QTPDPQRGIGMM-----PKR---GCDVNS--CEIGRFFRL---NNSG  425 (490)
Q Consensus       381 ~~~~~~-~~~~~--~~~~~i~~~~~s-----p~~---~~l~~~--~~~~~~~~~---~~~~  425 (490)
                      ...+.. .+..+  .|...|++++|+     |||   .+++++  ++.+++|++   .+++
T Consensus       606 ~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~  666 (902)
T 2oaj_A          606 PAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGK  666 (902)
T ss_dssp             TEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGC
T ss_pred             CeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCc
Confidence            652111 12223  455789999999     885   788877  558999999   6666

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=3.3e-35  Score=283.60  Aligned_cols=283  Identities=16%  Similarity=0.281  Sum_probs=224.6

Q ss_pred             cccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeec------------------ccCCeeEE
Q psy17682        110 NSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGG------------------HKGPVLDI  171 (490)
Q Consensus       110 ~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~------------------h~~~V~~~  171 (490)
                      ...|.+++|+|++  +   .++++ .++.+.+|+...     ++   ....+.+                  +...|.++
T Consensus        64 ~~~V~~v~fspdg--~---~la~g-~~~~v~i~~~~~-----g~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v  129 (393)
T 1erj_A           64 TSVVCCVKFSNDG--E---YLATG-CNKTTQVYRVSD-----GS---LVARLSDDSAANKDPENLNTSSSPSSDLYIRSV  129 (393)
T ss_dssp             SSCCCEEEECTTS--S---EEEEE-CBSCEEEEETTT-----CC---EEEEECC-----------------CCCCBEEEE
T ss_pred             CCEEEEEEECCCC--C---EEEEE-cCCcEEEEEecC-----CC---EEEEecCccccccccccccccccCCCceeEEEE
Confidence            4468999999995  2   33444 478999998852     11   1222222                  23359999


Q ss_pred             EECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeE
Q psy17682        172 AWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIM  251 (490)
Q Consensus       172 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~  251 (490)
                      +|+|++ .+|++|+.|++|++||+.+++....       +.+|...|.+++|+|++. +|++++.|++|++||+++++..
T Consensus       130 ~~s~dg-~~l~s~~~d~~i~iwd~~~~~~~~~-------~~~h~~~v~~~~~~p~~~-~l~s~s~d~~v~iwd~~~~~~~  200 (393)
T 1erj_A          130 CFSPDG-KFLATGAEDRLIRIWDIENRKIVMI-------LQGHEQDIYSLDYFPSGD-KLVSGSGDRTVRIWDLRTGQCS  200 (393)
T ss_dssp             EECTTS-SEEEEEETTSCEEEEETTTTEEEEE-------ECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEE
T ss_pred             EECCCC-CEEEEEcCCCeEEEEECCCCcEEEE-------EccCCCCEEEEEEcCCCC-EEEEecCCCcEEEEECCCCeeE
Confidence            999998 8999999999999999988765443       556999999999999995 9999999999999999999988


Q ss_pred             EEEecCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeee-------eecCCCceeEEEEeCCCcEEEEEeCCC
Q psy17682        252 IQIECHPDIVYSASWNW-DGSKLLTTCKDKKMRIINPRTGAIEEEA-------VCHEGSKATRAIYLKSGLIFTTGFSKM  323 (490)
Q Consensus       252 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~~~~~~~~~~~~s~~~~~l~~~~~~~  323 (490)
                      ..+. +...+.+++|+| ++++|++++.|+.|++||+++++.+..+       .+|... +.+++|+|+|++|++|+   
T Consensus       201 ~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~-v~~v~~~~~g~~l~s~s---  275 (393)
T 1erj_A          201 LTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS-VYSVVFTRDGQSVVSGS---  275 (393)
T ss_dssp             EEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSC-EEEEEECTTSSEEEEEE---
T ss_pred             EEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCC-EEEEEECCCCCEEEEEe---
Confidence            8777 667899999999 8999999999999999999999887766       355554 99999999999999998   


Q ss_pred             ceeEEEEecCCCCCCC----------eEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeC
Q psy17682        324 SERQYSLRAPDHLDEP----------IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQT  393 (490)
Q Consensus       324 ~~~~i~iwd~~~~~~~----------~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~  393 (490)
                      .|+.|++||+++....          .......|...|.+++|+|++++| ++|+.|+.|++||+.+++++ ..+.  .|
T Consensus       276 ~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~sgs~D~~v~iwd~~~~~~~-~~l~--~h  351 (393)
T 1erj_A          276 LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYI-LSGSKDRGVLFWDKKSGNPL-LMLQ--GH  351 (393)
T ss_dssp             TTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEE-EEEETTSEEEEEETTTCCEE-EEEE--CC
T ss_pred             CCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEE-EEEeCCCeEEEEECCCCeEE-EEEC--CC
Confidence            7999999999864321          112233577789999999999998 79999999999999998743 2222  35


Q ss_pred             CCceeeEEEee------CceeEEee--cceeEEEEecCC
Q psy17682        394 PDPQRGIGMMP------KRGCDVNS--CEIGRFFRLNNS  424 (490)
Q Consensus       394 ~~~i~~~~~sp------~~~~l~~~--~~~~~~~~~~~~  424 (490)
                      ...|.+++|++      ++.+++++  ++.+++|++...
T Consensus       352 ~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~  390 (393)
T 1erj_A          352 RNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI  390 (393)
T ss_dssp             SSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred             CCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence            57899999986      67788877  458899998654

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=2e-35  Score=302.17  Aligned_cols=369  Identities=11%  Similarity=0.121  Sum_probs=265.4

Q ss_pred             eeeeccCCC---CCcEEecccccce-eeeEEecc--CCCceEEeeeCCCeEEEEeCCCC--------CCCCC----CCcc
Q psy17682         25 LTYFSPRTL---TEPVVDLLYHQRR-VGLVLWHP--TAQNVLLTAGKEAEPILISLKDG--------YIPPS----EKSK   86 (490)
Q Consensus        25 ~~~~~~~~~---~~~~~~l~gH~~~-V~~v~~~p--~~~~~l~s~~~D~~v~iWd~~~~--------~~~~~----~~~~   86 (490)
                      +..|+..+.   ..+...+.+|.+. |++++|+|  ++ .+|++|+.||+|++||+.++        .....    ....
T Consensus        41 v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~-~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v  119 (615)
T 1pgu_A           41 AFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS-QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPI  119 (615)
T ss_dssp             EEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTC-CEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCE
T ss_pred             EEEEECCCCCCccccceEEecCCCceEEEEEECcCCCC-CEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccE
Confidence            556666532   1688899999999 99999999  88 89999999999999999643        11000    0000


Q ss_pred             ccceeccccceeecccCC------------C-----CCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCC
Q psy17682         87 SALKVTKRSNVLDKVGGK------------G-----GANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAP  149 (490)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~------------~-----~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~  149 (490)
                      ..+.+......+......            +     ...+...+.+++|+|+..    ..+++++.++.+++|+..    
T Consensus       120 ~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~----~~l~~~~~d~~v~vwd~~----  191 (615)
T 1pgu_A          120 SDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRP----MRSMTVGDDGSVVFYQGP----  191 (615)
T ss_dssp             EEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSS----CEEEEEETTTEEEEEETT----
T ss_pred             EEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCC----cEEEEEeCCCcEEEEeCC----
Confidence            011111111111100000            0     012334678899998851    257778999999999975    


Q ss_pred             CcccCCCCcceeecccC---CeeEEEECCC-CCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEee
Q psy17682        150 NTGRINADHALVGGHKG---PVLDIAWSPH-DDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP  225 (490)
Q Consensus       150 ~~~~~~~~~~~~~~h~~---~V~~~~~~p~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p  225 (490)
                       .+   .....+.+|.+   .|.+++|+|+ + .+|++++.||.|++||+.+++.+..+..+   ...|...|.+++|+ 
T Consensus       192 -~~---~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~---~~~~~~~v~~~~~~-  262 (615)
T 1pgu_A          192 -PF---KFSASDRTHHKQGSFVRDVEFSPDSG-EFVITVGSDRKISCFDGKSGEFLKYIEDD---QEPVQGGIFALSWL-  262 (615)
T ss_dssp             -TB---EEEEEECSSSCTTCCEEEEEECSTTC-CEEEEEETTCCEEEEETTTCCEEEECCBT---TBCCCSCEEEEEES-
T ss_pred             -Cc---ceeeeecccCCCCceEEEEEECCCCC-CEEEEEeCCCeEEEEECCCCCEeEEeccc---ccccCCceEEEEEc-
Confidence             22   24556788999   9999999999 6 89999999999999999988776654110   01599999999999 


Q ss_pred             CCCCEEEEEeCCCcEEEEECCCCeeEEEEecC----CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCC
Q psy17682        226 TAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH----PDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEG  301 (490)
Q Consensus       226 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  301 (490)
                      ++. +|++++.|+.|++||+++++.+..+..+    ...+.++.|. +++++++++.||.|++||+++++.+..+..|..
T Consensus       263 ~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~  340 (615)
T 1pgu_A          263 DSQ-KFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNK  340 (615)
T ss_dssp             SSS-EEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSS
T ss_pred             CCC-EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCC
Confidence            774 9999999999999999999999988866    3678888886 889999999999999999998877777765544


Q ss_pred             CceeEEEEeCC---------------------------------CcEEEEEeCCCceeEEEEecCC--------------
Q psy17682        302 SKATRAIYLKS---------------------------------GLIFTTGFSKMSERQYSLRAPD--------------  334 (490)
Q Consensus       302 ~~~~~~~~s~~---------------------------------~~~l~~~~~~~~~~~i~iwd~~--------------  334 (490)
                      . +.+++| |+                                 +..+++++   .++.+++||+.              
T Consensus       341 ~-v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~---~d~~i~~~~~~~~~~~~~~~~~~~s  415 (615)
T 1pgu_A          341 G-ITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSIS---WDDTLKVNGITKHEFGSQPKVASAN  415 (615)
T ss_dssp             C-EEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEE---TTTEEEETTEEEEECSSCEEEEEEC
T ss_pred             C-EEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEe---CCCCEEEEEcccCcccCCceEEEEc
Confidence            3 444443 32                                 44444444   34455555443              


Q ss_pred             ------------------------------------------------------------CCCCCeEEEeccCCCceeee
Q psy17682        335 ------------------------------------------------------------HLDEPIVMVELDTSNGVMFP  354 (490)
Q Consensus       335 ------------------------------------------------------------~~~~~~~~~~~~~~~~i~~~  354 (490)
                                                                                  ...... .....|...|.++
T Consensus       416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~-~~~~~~~~~v~~~  494 (615)
T 1pgu_A          416 NDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSF-DLKTPLRAKPSYI  494 (615)
T ss_dssp             SSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEE-ECSSCCSSCEEEE
T ss_pred             CCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccc-cccCCccCceEEE
Confidence                                                                        211000 1122456679999


Q ss_pred             eecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee--CCCceeeEEEee----------CceeEEeec--ceeEEEE
Q psy17682        355 LYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ--TPDPQRGIGMMP----------KRGCDVNSC--EIGRFFR  420 (490)
Q Consensus       355 ~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~i~~~~~sp----------~~~~l~~~~--~~~~~~~  420 (490)
                      +|+|++++| ++|+.||.|++||+.+++.    +..+.  +...|++++|+|          ++.++++++  +.+++|+
T Consensus       495 ~~s~~g~~l-~~~~~dg~i~iw~~~~~~~----~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~  569 (615)
T 1pgu_A          495 SISPSETYI-AAGDVMGKILLYDLQSREV----KTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYS  569 (615)
T ss_dssp             EECTTSSEE-EEEETTSCEEEEETTTTEE----EECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEE
T ss_pred             EECCCCCEE-EEcCCCCeEEEeeCCCCcc----eeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEE
Confidence            999999998 7899999999999998863    22222  567899999999          999988884  5889999


Q ss_pred             ecCC
Q psy17682        421 LNNS  424 (490)
Q Consensus       421 ~~~~  424 (490)
                      +.++
T Consensus       570 ~~~~  573 (615)
T 1pgu_A          570 VKRP  573 (615)
T ss_dssp             SSCT
T ss_pred             CCCC
Confidence            9886

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=1.2e-35  Score=313.97  Aligned_cols=339  Identities=13%  Similarity=0.091  Sum_probs=268.2

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      .....+.+|.+.|++++|+|++ .+|++|+.||.|+|||+.++..                  ...+..     +...+.
T Consensus         4 ~~~~~~~~h~~~v~~i~~sp~~-~~la~~~~~g~v~iwd~~~~~~------------------~~~~~~-----~~~~v~   59 (814)
T 3mkq_A            4 DIKKTFSNRSDRVKGIDFHPTE-PWVLTTLYSGRVEIWNYETQVE------------------VRSIQV-----TETPVR   59 (814)
T ss_dssp             CCEEEEEEECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEE------------------EEEEEC-----CSSCEE
T ss_pred             ccceeeecCCCceEEEEECCCC-CEEEEEeCCCEEEEEECCCCce------------------EEEEec-----CCCcEE
Confidence            3567789999999999999999 8999999999999999987541                  111111     233688


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                      +++|+|+.     ..+++++.+|.|.+|++.     .   ......+.+|.+.|.+++|+|++ .+|++++.||.|++||
T Consensus        60 ~~~~s~~~-----~~l~~~~~dg~i~vw~~~-----~---~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~  125 (814)
T 3mkq_A           60 AGKFIARK-----NWIIVGSDDFRIRVFNYN-----T---GEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWN  125 (814)
T ss_dssp             EEEEEGGG-----TEEEEEETTSEEEEEETT-----T---CCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEE
T ss_pred             EEEEeCCC-----CEEEEEeCCCeEEEEECC-----C---CcEEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEE
Confidence            99999985     357778889999999985     2   23456778999999999999998 8999999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEee-CCCCEEEEEeCCCcEEEEECCCCeeEEEEecCC-CcEEEEEEcC--CC
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHP-TAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHP-DIVYSASWNW--DG  270 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~--~~  270 (490)
                      +.++...      ...+.+|...|.+++|+| ++ ..+++++.||.|++||+.+++....+..+. ..+.+++|+|  ++
T Consensus       126 ~~~~~~~------~~~~~~~~~~v~~~~~~p~~~-~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  198 (814)
T 3mkq_A          126 WENNWAL------EQTFEGHEHFVMCVAFNPKDP-STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDK  198 (814)
T ss_dssp             GGGTSEE------EEEEECCSSCEEEEEEETTEE-EEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTC
T ss_pred             CCCCceE------EEEEcCCCCcEEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCC
Confidence            9766321      223556999999999999 66 599999999999999999888777776554 8899999999  99


Q ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCc
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNG  350 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~  350 (490)
                      ++|++++.||.|++||+++++.+..+..|... +.+++|+|++.++++++   .++.|++||+.+......  ...+...
T Consensus       199 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~---~dg~v~vwd~~~~~~~~~--~~~~~~~  272 (814)
T 3mkq_A          199 PYMITASDDLTIKIWDYQTKSCVATLEGHMSN-VSFAVFHPTLPIIISGS---EDGTLKIWNSSTYKVEKT--LNVGLER  272 (814)
T ss_dssp             CEEEEECTTSEEEEEETTTTEEEEEEECCSSC-EEEEEECSSSSEEEEEE---TTSCEEEEETTTCSEEEE--ECCSSSS
T ss_pred             CEEEEEeCCCEEEEEECCCCcEEEEEcCCCCC-EEEEEEcCCCCEEEEEe---CCCeEEEEECCCCcEEEE--eecCCCc
Confidence            99999999999999999999999988888775 99999999999999998   689999999987653222  2245578


Q ss_pred             eeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEE------ee---------------------------------e-
Q psy17682        351 VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHY------IN---------------------------------T-  390 (490)
Q Consensus       351 i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~------~~---------------------------------~-  390 (490)
                      +.+++|+|+++.++++.+.++.+.+|++....+....      +.                                 . 
T Consensus       273 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (814)
T 3mkq_A          273 SWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKEL  352 (814)
T ss_dssp             EEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEE
T ss_pred             EEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecC
Confidence            9999999999854234445777889987654322111      00                                 0 


Q ss_pred             eeCCCceeeEEEeeCceeEEee-cceeEEEEecCC
Q psy17682        391 FQTPDPQRGIGMMPKRGCDVNS-CEIGRFFRLNNS  424 (490)
Q Consensus       391 ~~~~~~i~~~~~sp~~~~l~~~-~~~~~~~~~~~~  424 (490)
                      ..+...+.+++|+|+|.+++++ ++.+.+|++...
T Consensus       353 ~~~~~~~~~~~~spdg~~la~~~~~~~~i~~~~~~  387 (814)
T 3mkq_A          353 GSVDVFPQSLAHSPNGRFVTVVGDGEYVIYTALAW  387 (814)
T ss_dssp             CCCSSCCSEEEECTTSSEEEEEETTEEEEEETTTT
T ss_pred             CCCccCCceeEECCCCCEEEEecCCEEEEEECccc
Confidence            0122357899999999887765 557788886543

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=5.5e-35  Score=283.02  Aligned_cols=246  Identities=15%  Similarity=0.244  Sum_probs=204.0

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEE
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAI  242 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~i  242 (490)
                      .|.+.|.+++|+|++ .+|++|+.||.|++||+.+++.+..       +.+|...|.+++|+  + +++++++.||.|++
T Consensus       132 ~~~~~v~~v~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~-------~~~~~~~v~~~~~~--~-~~l~~~~~dg~i~i  200 (401)
T 4aez_A          132 DESTYVASVKWSHDG-SFLSVGLGNGLVDIYDVESQTKLRT-------MAGHQARVGCLSWN--R-HVLSSGSRSGAIHH  200 (401)
T ss_dssp             CTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEE-------ECCCSSCEEEEEEE--T-TEEEEEETTSEEEE
T ss_pred             CCCCCEEEEEECCCC-CEEEEECCCCeEEEEECcCCeEEEE-------ecCCCCceEEEEEC--C-CEEEEEcCCCCEEE
Confidence            378899999999988 8999999999999999998876554       44699999999995  3 48999999999999


Q ss_pred             EECC-CCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc-EEEEEe
Q psy17682        243 WNVG-TGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL-IFTTGF  320 (490)
Q Consensus       243 wd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~~~  320 (490)
                      ||++ .+..+..+.+|...|.+++|+|++++|++++.|+.|++||+++++....+..|... +.+++|+|++. ++++++
T Consensus       201 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~p~~~~ll~~~~  279 (401)
T 4aez_A          201 HDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAA-VKAVAWCPWQSNLLATGG  279 (401)
T ss_dssp             EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSC-CCEEEECTTSTTEEEEEC
T ss_pred             EecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcce-EEEEEECCCCCCEEEEec
Confidence            9998 56678888899999999999999999999999999999999999998888877765 99999999764 555543


Q ss_pred             CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEE-ecCCCeEEEEEecCCCCeeEEeeeeeCCCceee
Q psy17682        321 SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLC-GKGDSVIRYFEITAEPPFVHYINTFQTPDPQRG  399 (490)
Q Consensus       321 ~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~  399 (490)
                      . ..++.|++||+.++..   .....+...+.+++|+|++++++++ |+.||.|++||+.+++. ........+...|.+
T Consensus       280 g-s~d~~i~i~d~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~-~~~~~~~~h~~~v~~  354 (401)
T 4aez_A          280 G-TMDKQIHFWNAATGAR---VNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL-TKQVDIPAHDTRVLY  354 (401)
T ss_dssp             C-TTTCEEEEEETTTCCE---EEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE-EEEEEEECCSSCCCE
T ss_pred             C-CCCCEEEEEECCCCCE---EEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc-eeEEEecCCCCCEEE
Confidence            1 1489999999998653   3334566789999999999999544 55899999999998752 222222345678999


Q ss_pred             EEEeeCceeEEee--cceeEEEEecCCC
Q psy17682        400 IGMMPKRGCDVNS--CEIGRFFRLNNSG  425 (490)
Q Consensus       400 ~~~sp~~~~l~~~--~~~~~~~~~~~~~  425 (490)
                      ++|+|++.+++++  ++.+++|++.+++
T Consensus       355 ~~~s~dg~~l~s~~~dg~i~iw~~~~~~  382 (401)
T 4aez_A          355 SALSPDGRILSTAASDENLKFWRVYDGD  382 (401)
T ss_dssp             EEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred             EEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence            9999999988877  4588999998876

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=2.1e-35  Score=280.70  Aligned_cols=265  Identities=16%  Similarity=0.199  Sum_probs=220.0

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK  104 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (490)
                      +..|+..+ ......+..|...|.+++|+|++ .+|++|+.|+.+++|++.......                       
T Consensus        88 v~vWd~~~-~~~~~~~~~~~~~v~~~~~sp~g-~~lasg~~d~~i~v~~~~~~~~~~-----------------------  142 (354)
T 2pbi_B           88 VIVWDSFT-TNKEHAVTMPCTWVMACAYAPSG-CAIACGGLDNKCSVYPLTFDKNEN-----------------------  142 (354)
T ss_dssp             EEEEETTT-CCEEEEEECSSSCCCEEEECTTS-SEEEEESTTSEEEEEECCCCTTCC-----------------------
T ss_pred             EEEEECCC-CCcceEEecCCCCEEEEEECCCC-CEEEEeeCCCCEEEEEEecccccc-----------------------
Confidence            34455432 34456678899999999999999 899999999999999986532100                       


Q ss_pred             CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE
Q psy17682        105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG  184 (490)
Q Consensus       105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~  184 (490)
                                                                       .......+.+|.+.|.+++|+|++ ..|+++
T Consensus       143 -------------------------------------------------~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~  172 (354)
T 2pbi_B          143 -------------------------------------------------MAAKKKSVAMHTNYLSACSFTNSD-MQILTA  172 (354)
T ss_dssp             -------------------------------------------------SGGGCEEEEECSSCEEEEEECSSS-SEEEEE
T ss_pred             -------------------------------------------------ccccceeeeccCCcEEEEEEeCCC-CEEEEE
Confidence                                                             000122456899999999999988 899999


Q ss_pred             eCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCC-CCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEE
Q psy17682        185 SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTA-QNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYS  263 (490)
Q Consensus       185 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~  263 (490)
                      +.|++|++||+++++.+..       +.+|...|.+++|+|+. .++|++|+.||.|++||+++++++..+..|...|.+
T Consensus       173 s~D~~v~lwd~~~~~~~~~-------~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~  245 (354)
T 2pbi_B          173 SGDGTCALWDVESGQLLQS-------FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNS  245 (354)
T ss_dssp             ETTSEEEEEETTTCCEEEE-------EECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred             eCCCcEEEEeCCCCeEEEE-------EcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEE
Confidence            9999999999998876554       55699999999998852 259999999999999999999999999999999999


Q ss_pred             EEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecC-CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE
Q psy17682        264 ASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHE-GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM  342 (490)
Q Consensus       264 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~  342 (490)
                      ++|+|++++|++++.|++|++||+++++.+..+..+. ...+.+++|+|+|.+|++|+   .|+.|++||+.++...  .
T Consensus       246 v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~---~d~~i~vwd~~~~~~~--~  320 (354)
T 2pbi_B          246 VRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGY---NDYTINVWDVLKGSRV--S  320 (354)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE---TTSCEEEEETTTCSEE--E
T ss_pred             EEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEE---CCCcEEEEECCCCceE--E
Confidence            9999999999999999999999999987776665332 12478999999999999998   6899999999876532  2


Q ss_pred             EeccCCCceeeeeecCCCCeEEEEecCCCeEEEEE
Q psy17682        343 VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFE  377 (490)
Q Consensus       343 ~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd  377 (490)
                      ....|...|.+++|+|+|++| ++|+.|+.|++|+
T Consensus       321 ~l~~h~~~v~~l~~spdg~~l-~sgs~D~~v~vW~  354 (354)
T 2pbi_B          321 ILFGHENRVSTLRVSPDGTAF-CSGSWDHTLRVWA  354 (354)
T ss_dssp             EECCCSSCEEEEEECTTSSCE-EEEETTSEEEEEC
T ss_pred             EEECCCCcEEEEEECCCCCEE-EEEcCCCCEEecC
Confidence            234677889999999999998 8999999999996

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=6.2e-35  Score=298.61  Aligned_cols=339  Identities=12%  Similarity=0.117  Sum_probs=252.0

Q ss_pred             CCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682         33 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST  112 (490)
Q Consensus        33 ~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (490)
                      ...+...+.+|...|++++|+|+++.+|++++.|+.|++||+.++..                  ...+...  ......
T Consensus       149 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~------------------~~~~~~~--~~~~~~  208 (615)
T 1pgu_A          149 SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKF------------------SASDRTH--HKQGSF  208 (615)
T ss_dssp             TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEE------------------EEEECSS--SCTTCC
T ss_pred             CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcce------------------eeeeccc--CCCCce
Confidence            44677889999999999999999966899999999999999876441                  1111110  001125


Q ss_pred             CCeeEeccc-cccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCccee-e---cccCCeeEEEECCCCCCEEEEEeCC
Q psy17682        113 ANEITISED-YVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALV-G---GHKGPVLDIAWSPHDDNVIASGSED  187 (490)
Q Consensus       113 v~~~~~s~~-~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~-~---~h~~~V~~~~~~p~~~~~l~s~~~d  187 (490)
                      +.+++|+|+ .     ..+++++.+|.+++|++.     .+   +....+ .   +|...|.+++|+ ++ .+|++++.|
T Consensus       209 v~~~~~~~~~~-----~~l~~~~~dg~i~vwd~~-----~~---~~~~~~~~~~~~~~~~v~~~~~~-~~-~~l~~~~~d  273 (615)
T 1pgu_A          209 VRDVEFSPDSG-----EFVITVGSDRKISCFDGK-----SG---EFLKYIEDDQEPVQGGIFALSWL-DS-QKFATVGAD  273 (615)
T ss_dssp             EEEEEECSTTC-----CEEEEEETTCCEEEEETT-----TC---CEEEECCBTTBCCCSCEEEEEES-SS-SEEEEEETT
T ss_pred             EEEEEECCCCC-----CEEEEEeCCCeEEEEECC-----CC---CEeEEecccccccCCceEEEEEc-CC-CEEEEEcCC
Confidence            889999998 5     367778899999999985     22   234455 5   899999999999 77 899999999


Q ss_pred             CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEc
Q psy17682        188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWN  267 (490)
Q Consensus       188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~  267 (490)
                      +.|++||+++++....+..+.   ..+...+.++.|. ++ .++++++.|+.|++||+.+++.+..+.+|...|.+++| 
T Consensus       274 ~~i~~wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~-~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-  347 (615)
T 1pgu_A          274 ATIRVWDVTTSKCVQKWTLDK---QQLGNQQVGVVAT-GN-GRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-  347 (615)
T ss_dssp             SEEEEEETTTTEEEEEEECCT---TCGGGCEEEEEEE-ET-TEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-
T ss_pred             CcEEEEECCCCcEEEEEcCCC---CcccCceeEEEeC-CC-CeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-
Confidence            999999999887665543210   1134678888886 55 48999999999999999988888887776666665555 


Q ss_pred             CC---------------------------------CCEEEEEeCCCe---------------------------------
Q psy17682        268 WD---------------------------------GSKLLTTCKDKK---------------------------------  281 (490)
Q Consensus       268 ~~---------------------------------~~~l~~~~~dg~---------------------------------  281 (490)
                      |+                                 +..|++++.|+.                                 
T Consensus       348 ~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~  427 (615)
T 1pgu_A          348 NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDD  427 (615)
T ss_dssp             TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTS
T ss_pred             cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCC
Confidence            33                                 444444444444                                 


Q ss_pred             -----------------------------------------EEEEeCCCCcee-eeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682        282 -----------------------------------------MRIINPRTGAIE-EEAVCHEGSKATRAIYLKSGLIFTTG  319 (490)
Q Consensus       282 -----------------------------------------i~iwd~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~~  319 (490)
                                                               |++||+.+++.. ..+..|.. .+.+++|+|++++|+++
T Consensus       428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~g~~l~~~  506 (615)
T 1pgu_A          428 DLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRA-KPSYISISPSETYIAAG  506 (615)
T ss_dssp             EEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSS-CEEEEEECTTSSEEEEE
T ss_pred             ceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccC-ceEEEEECCCCCEEEEc
Confidence                                                     444444433322 33334555 49999999999999999


Q ss_pred             eCCCceeEEEEecCCCCCCCeEEEec-c-CCCceeeeeecC----------CCCeEEEEecCCCeEEEEEecCCCCeeEE
Q psy17682        320 FSKMSERQYSLRAPDHLDEPIVMVEL-D-TSNGVMFPLYDP----------DTNLVYLCGKGDSVIRYFEITAEPPFVHY  387 (490)
Q Consensus       320 ~~~~~~~~i~iwd~~~~~~~~~~~~~-~-~~~~i~~~~~s~----------~~~~l~~~g~~dg~i~iwd~~~~~~~~~~  387 (490)
                      +   .++.|++||+.+.+.   .... . |...|.+++|+|          ++++| ++++.||.|++||+.++......
T Consensus       507 ~---~dg~i~iw~~~~~~~---~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~  579 (615)
T 1pgu_A          507 D---VMGKILLYDLQSREV---KTSRWAFRTSKINAISWKPAEKGANEEEIEEDLV-ATGSLDTNIFIYSVKRPMKIIKA  579 (615)
T ss_dssp             E---TTSCEEEEETTTTEE---EECCSCCCSSCEEEEEECCCC------CCSCCEE-EEEETTSCEEEEESSCTTCCEEE
T ss_pred             C---CCCeEEEeeCCCCcc---eeEeecCCCCceeEEEEcCccccccccccCCCEE-EEEcCCCcEEEEECCCCceechh
Confidence            8   689999999987653   2222 3 778899999999          99998 78999999999999987433333


Q ss_pred             eeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecC
Q psy17682        388 INTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNN  423 (490)
Q Consensus       388 ~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~  423 (490)
                      +.  .+...|++++|+|++. ++++  ++.+++|++..
T Consensus       580 ~~--~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~  614 (615)
T 1pgu_A          580 LN--AHKDGVNNLLWETPST-LVSSGADACIKRWNVVL  614 (615)
T ss_dssp             TT--SSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred             hh--cCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence            32  3567899999999999 7776  45789999864

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=7.6e-37  Score=286.01  Aligned_cols=254  Identities=16%  Similarity=0.201  Sum_probs=201.3

Q ss_pred             EecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeE
Q psy17682         38 VDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEIT  117 (490)
Q Consensus        38 ~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  117 (490)
                      ..+.+|.+.|++++|+|++ .+|+||+.|++|+|||+.++..                                      
T Consensus         7 ~~~~~H~~~V~~v~~s~~g-~~lasgs~D~~v~lwd~~~~~~--------------------------------------   47 (316)
T 3bg1_A            7 TVDTSHEDMIHDAQMDYYG-TRLATCSSDRSVKIFDVRNGGQ--------------------------------------   47 (316)
T ss_dssp             -------CCEEEEEECGGG-CEEEEEETTTEEEEEEEETTEE--------------------------------------
T ss_pred             eecccccCeEEEeeEcCCC-CEEEEEeCCCeEEEEEecCCCc--------------------------------------
Confidence            4578999999999999999 8999999999999999875320                                      


Q ss_pred             eccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCC-CCCEEEEEeCCCcEEEEECC
Q psy17682        118 ISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPH-DDNVIASGSEDCVVKVWQIP  196 (490)
Q Consensus       118 ~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~-~~~~l~s~~~dg~i~iwd~~  196 (490)
                                                            .....+.+|.+.|.+++|+|. .+++|++|+.|++|++||++
T Consensus        48 --------------------------------------~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~   89 (316)
T 3bg1_A           48 --------------------------------------ILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE   89 (316)
T ss_dssp             --------------------------------------EEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred             --------------------------------------EEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence                                                  001245689999999999863 23899999999999999998


Q ss_pred             CCCcccccccceeeecccccCEEEEEEeeC--CCCEEEEEeCCCcEEEEECCCCee---EEEEecCCCcEEEEEEcCC--
Q psy17682        197 DGGISRTLTEPVVDLLYHQRRVGLVLWHPT--AQNVLLTAGSDNNVAIWNVGTGEI---MIQIECHPDIVYSASWNWD--  269 (490)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~dg~v~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~--  269 (490)
                      +++..     ....+.+|...|.+++|+|+  + .+|++|+.|+.|++||++.+..   ...+.+|...|.+++|+|+  
T Consensus        90 ~~~~~-----~~~~~~~h~~~V~~v~~~p~~~g-~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~  163 (316)
T 3bg1_A           90 NGTWE-----KSHEHAGHDSSVNSVCWAPHDYG-LILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVV  163 (316)
T ss_dssp             SSCCC-----EEEEECCCSSCCCEEEECCTTTC-SCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCC
T ss_pred             CCcce-----EEEEccCCCCceEEEEECCCCCC-cEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccC
Confidence            76432     12235679999999999998  5 4899999999999999987632   3345578899999999997  


Q ss_pred             ---------------CCEEEEEeCCCeEEEEeCCCC---ceeeeeeecCCCceeEEEEeCCC----cEEEEEeCCCceeE
Q psy17682        270 ---------------GSKLLTTCKDKKMRIINPRTG---AIEEEAVCHEGSKATRAIYLKSG----LIFTTGFSKMSERQ  327 (490)
Q Consensus       270 ---------------~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~s~~~----~~l~~~~~~~~~~~  327 (490)
                                     +++|++++.|++|++||++..   ++...+.+|... +.+++|+|++    .+|++++   .|+.
T Consensus       164 ~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~-V~~v~~sp~~~~~~~~las~s---~D~~  239 (316)
T 3bg1_A          164 PGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDW-VRDVAWAPSIGLPTSTIASCS---QDGR  239 (316)
T ss_dssp             C------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSC-EEEEECCCCSSCSCCEEEEEE---TTCE
T ss_pred             CccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCc-eEEEEecCCCCCCCceEEEEc---CCCe
Confidence                           478999999999999999765   356667788775 9999999986    7899998   7999


Q ss_pred             EEEecCCCCCC----CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        328 YSLRAPDHLDE----PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       328 i~iwd~~~~~~----~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      |++|++.....    ...+  ..+...|.+++|+|++++| ++++.|+.|++|+....
T Consensus       240 v~iw~~~~~~~~~~~~~~~--~~~~~~v~~v~~sp~g~~l-as~~~D~~v~lw~~~~~  294 (316)
T 3bg1_A          240 VFIWTCDDASSNTWSPKLL--HKFNDVVWHVSWSITANIL-AVSGGDNKVTLWKESVD  294 (316)
T ss_dssp             EEEEECSSTTCCCCBCCEE--EECSSCEEEEEECTTTCCE-EEEESSSCEEEEEECTT
T ss_pred             EEEEEccCccccchhhhhh--hcCCCcEEEEEEcCCCCEE-EEEcCCCeEEEEEECCC
Confidence            99999876321    1122  2456789999999999998 78999999999998743

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=1.2e-35  Score=284.45  Aligned_cols=294  Identities=14%  Similarity=0.158  Sum_probs=234.3

Q ss_pred             cccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEec
Q psy17682         40 LLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITIS  119 (490)
Q Consensus        40 l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  119 (490)
                      +..|.+.|++++|+|++ .+|++|+.|+.|++||+.++..                                        
T Consensus         4 ~~~~~~~i~~~~~s~~~-~~l~~~~~d~~v~i~~~~~~~~----------------------------------------   42 (372)
T 1k8k_C            4 HSFLVEPISCHAWNKDR-TQIAICPNNHEVHIYEKSGNKW----------------------------------------   42 (372)
T ss_dssp             EESCSSCCCEEEECTTS-SEEEEECSSSEEEEEEEETTEE----------------------------------------
T ss_pred             ecccCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCCCCcE----------------------------------------
Confidence            45599999999999999 8999999999999999876320                                        


Q ss_pred             cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682        120 EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG  199 (490)
Q Consensus       120 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~  199 (490)
                                                          .....+.+|...|.+++|+|++ .+|++++.||.|++||+.+++
T Consensus        43 ------------------------------------~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~   85 (372)
T 1k8k_C           43 ------------------------------------VQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLKGRT   85 (372)
T ss_dssp             ------------------------------------EEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEETTE
T ss_pred             ------------------------------------EeeeeecCCCCcccEEEEeCCC-CEEEEEcCCCeEEEEECCCCe
Confidence                                                0112456899999999999988 899999999999999997775


Q ss_pred             cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee---EEEE-ecCCCcEEEEEEcCCCCEEEE
Q psy17682        200 ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI---MIQI-ECHPDIVYSASWNWDGSKLLT  275 (490)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~---~~~~-~~~~~~v~~~~~~~~~~~l~~  275 (490)
                      .....     .+..|...|.+++|+|++. +|++++.|+.|++||++.++.   ...+ ..|...|.+++|+|++++|++
T Consensus        86 ~~~~~-----~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~  159 (372)
T 1k8k_C           86 WKPTL-----VILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA  159 (372)
T ss_dssp             EEEEE-----ECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEE
T ss_pred             eeeeE-----EeecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEE
Confidence            43222     2455889999999999985 999999999999999988763   3333 468899999999999999999


Q ss_pred             EeCCCeEEEEeCC------------------CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC
Q psy17682        276 TCKDKKMRIINPR------------------TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD  337 (490)
Q Consensus       276 ~~~dg~i~iwd~~------------------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~  337 (490)
                      ++.||.|++||++                  .++.+..+..|... +.+++|+|++.+|++++   .++.|++||+++.+
T Consensus       160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~  235 (372)
T 1k8k_C          160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW-VHGVCFSANGSRVAWVS---HDSTVCLADADKKM  235 (372)
T ss_dssp             EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC-EEEEEECSSSSEEEEEE---TTTEEEEEEGGGTT
T ss_pred             EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCe-EEEEEECCCCCEEEEEe---CCCEEEEEECCCCc
Confidence            9999999999954                  56777777777765 99999999999999998   68999999999766


Q ss_pred             CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC--CCC-e---------------------------eEE
Q psy17682        338 EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA--EPP-F---------------------------VHY  387 (490)
Q Consensus       338 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~--~~~-~---------------------------~~~  387 (490)
                      ....+  ..+...+.+++|+|+++++ ++| .|+.|++|++.+  ++- +                           ...
T Consensus       236 ~~~~~--~~~~~~v~~~~~~~~~~~l-~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (372)
T 1k8k_C          236 AVATL--ASETLPLLAVTFITESSLV-AAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASS  311 (372)
T ss_dssp             EEEEE--ECSSCCEEEEEEEETTEEE-EEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC--
T ss_pred             eeEEE--ccCCCCeEEEEEecCCCEE-EEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccccccc
Confidence            43332  2456689999999999887 666 899999999988  310 0                           000


Q ss_pred             -------eee-eeCCCceeeEEEe-eCc---eeEEee--cceeEEEEecCCC
Q psy17682        388 -------INT-FQTPDPQRGIGMM-PKR---GCDVNS--CEIGRFFRLNNSG  425 (490)
Q Consensus       388 -------~~~-~~~~~~i~~~~~s-p~~---~~l~~~--~~~~~~~~~~~~~  425 (490)
                             ... ..|..+|++++|+ ++|   .+++++  ++.+++|++.+.+
T Consensus       312 ~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~  363 (372)
T 1k8k_C          312 EGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE  363 (372)
T ss_dssp             -------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred             ccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence                   111 1456789999977 555   777777  4588999987643

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=2.5e-35  Score=289.62  Aligned_cols=305  Identities=12%  Similarity=0.162  Sum_probs=223.0

Q ss_pred             ccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecc
Q psy17682         41 LYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISE  120 (490)
Q Consensus        41 ~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  120 (490)
                      ..|.+.|++++|+|++ .+|++|+.||.|+|||+.++.....                                      
T Consensus        25 ~~~~~~V~~v~~s~~g-~~la~g~~dg~v~iw~~~~~~~~~~--------------------------------------   65 (447)
T 3dw8_B           25 VAEADIISTVEFNHSG-ELLATGDKGGRVVIFQQEQENKIQS--------------------------------------   65 (447)
T ss_dssp             CCGGGSEEEEEECSSS-SEEEEEETTSEEEEEEECC-----C--------------------------------------
T ss_pred             ccccCcEEEEEECCCC-CEEEEEcCCCeEEEEEecCCCCCCc--------------------------------------
Confidence            4578999999999999 8999999999999999987541100                                      


Q ss_pred             ccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeeccc------------CCeeEEEECCCCC-CEEEEEeCC
Q psy17682        121 DYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHK------------GPVLDIAWSPHDD-NVIASGSED  187 (490)
Q Consensus       121 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~------------~~V~~~~~~p~~~-~~l~s~~~d  187 (490)
                                   ...+.                ......+.+|.            +.|.+++|+|++. .+|++++.|
T Consensus        66 -------------~~~~~----------------~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d  116 (447)
T 3dw8_B           66 -------------HSRGE----------------YNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTND  116 (447)
T ss_dssp             -------------CCCCC----------------EEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECS
T ss_pred             -------------ccccc----------------eeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCC
Confidence                         00000                00122345666            8899999999864 589999999


Q ss_pred             CcEEEEECCCCCcccc-------------------ccc-------------ceee-ecccccCEEEEEEeeCCCCEEEEE
Q psy17682        188 CVVKVWQIPDGGISRT-------------------LTE-------------PVVD-LLYHQRRVGLVLWHPTAQNVLLTA  234 (490)
Q Consensus       188 g~i~iwd~~~~~~~~~-------------------~~~-------------~~~~-~~~~~~~v~~~~~~p~~~~~l~s~  234 (490)
                      ++|++||+.+++....                   +..             +... ..+|...|.+++|+|++. +|++|
T Consensus       117 ~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~  195 (447)
T 3dw8_B          117 KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYE-TYLSA  195 (447)
T ss_dssp             SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSS-EEEEE
T ss_pred             CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCC-EEEEe
Confidence            9999999876432100                   000             0111 357999999999999985 88888


Q ss_pred             eCCCcEEEEECCC-CeeEEE-------EecCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCce----eeeeeecCC
Q psy17682        235 GSDNNVAIWNVGT-GEIMIQ-------IECHPDIVYSASWNWDG-SKLLTTCKDKKMRIINPRTGAI----EEEAVCHEG  301 (490)
Q Consensus       235 ~~dg~v~iwd~~~-~~~~~~-------~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~  301 (490)
                       .|+.|++||+++ ++.+..       +.+|...|.+++|+|++ ++|++++.||.|++||+++++.    ...+..|..
T Consensus       196 -~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  274 (447)
T 3dw8_B          196 -DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPED  274 (447)
T ss_dssp             -CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC--
T ss_pred             -CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCC
Confidence             799999999984 444442       45799999999999998 9999999999999999999886    677777664


Q ss_pred             -----------CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCC-CCCCeEEEeccCC----------C---ceeeeee
Q psy17682        302 -----------SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDH-LDEPIVMVELDTS----------N---GVMFPLY  356 (490)
Q Consensus       302 -----------~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~-~~~~~~~~~~~~~----------~---~i~~~~~  356 (490)
                                 ..+.+++|+|+|++|++++   . +.|++||++. ......+......          .   .+..++|
T Consensus       275 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~---~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~  350 (447)
T 3dw8_B          275 PSNRSFFSEIISSISDVKFSHSGRYMMTRD---Y-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCW  350 (447)
T ss_dssp             ---CCHHHHHTTCEEEEEECTTSSEEEEEE---S-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEE
T ss_pred             ccccccccccCceEEEEEECCCCCEEEEee---C-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEE
Confidence                       1599999999999999997   4 9999999987 4433333321100          0   1334899


Q ss_pred             cCCCCeEEEEecCCCeEEEEEecCCCCeeEEe-----------------------------eeeeCCCceeeEEEeeCce
Q psy17682        357 DPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI-----------------------------NTFQTPDPQRGIGMMPKRG  407 (490)
Q Consensus       357 s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~-----------------------------~~~~~~~~i~~~~~sp~~~  407 (490)
                      +|++++| ++|+.||.|++||+.+++.+.-..                             ........|..++|+|++.
T Consensus       351 s~~~~~l-~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~  429 (447)
T 3dw8_B          351 NGSDSVV-MTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKEN  429 (447)
T ss_dssp             CTTSSEE-EEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSS
T ss_pred             CCCCCEE-EEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCC
Confidence            9999998 899999999999999886321000                             0112235688999999999


Q ss_pred             eEEeecc-eeEEEE
Q psy17682        408 CDVNSCE-IGRFFR  420 (490)
Q Consensus       408 ~l~~~~~-~~~~~~  420 (490)
                      ++++++. .+.+|.
T Consensus       430 ~la~~~~~~~~~~~  443 (447)
T 3dw8_B          430 IIAVATTNNLYIFQ  443 (447)
T ss_dssp             EEEEECSSCEEEEE
T ss_pred             EEEEEecceeeeec
Confidence            9887754 445554

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=1.4e-34  Score=268.10  Aligned_cols=254  Identities=17%  Similarity=0.164  Sum_probs=203.6

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC--CCCEEEEEeCC
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT--AQNVLLTAGSD  237 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~d  237 (490)
                      ++.+|.+.|.+++|+|+| ++|++|+.|++|+|||+.....     .....+.+|...|.+++|+|.  + .+|++|+.|
T Consensus         4 ~~~~h~~~V~~~~~s~~g-~~las~s~D~~v~iw~~~~~~~-----~~~~~l~gH~~~V~~v~~s~~~~g-~~l~s~s~D   76 (297)
T 2pm7_B            4 IANAHNEMIHDAVMDYYG-KRMATCSSDKTIKIFEVEGETH-----KLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYD   76 (297)
T ss_dssp             ECCSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEBCSSCB-----CCCEEECCCSSCEEEEEECCGGGC-SEEEEEETT
T ss_pred             eccCCcCceEEEEECCCC-CEEEEEeCCCEEEEEecCCCCc-----EEEEEEccccCCeEEEEecCCCcC-CEEEEEcCC
Confidence            567999999999999998 8999999999999999875321     123346789999999999864  5 599999999


Q ss_pred             CcEEEEECCCCe--eEEEEecCCCcEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCce--eeeeeecCCCceeEEEEeC
Q psy17682        238 NNVAIWNVGTGE--IMIQIECHPDIVYSASWNWD--GSKLLTTCKDKKMRIINPRTGAI--EEEAVCHEGSKATRAIYLK  311 (490)
Q Consensus       238 g~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~s~  311 (490)
                      ++|++||+++++  .+..+..|...|.+++|+|+  +.+|++++.|++|++||++++..  ...+.+|... +.+++|+|
T Consensus        77 ~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~-v~~~~~~p  155 (297)
T 2pm7_B           77 GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG-VNSASWAP  155 (297)
T ss_dssp             TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSC-EEEEEECC
T ss_pred             CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCc-cceEeecC
Confidence            999999998774  56677889999999999997  88999999999999999987642  3455677765 99999999


Q ss_pred             C-------------CcEEEEEeCCCceeEEEEecCCCCCCCeE--EEeccCCCceeeeeecCCC---CeEEEEecCCCeE
Q psy17682        312 S-------------GLIFTTGFSKMSERQYSLRAPDHLDEPIV--MVELDTSNGVMFPLYDPDT---NLVYLCGKGDSVI  373 (490)
Q Consensus       312 ~-------------~~~l~~~~~~~~~~~i~iwd~~~~~~~~~--~~~~~~~~~i~~~~~s~~~---~~l~~~g~~dg~i  373 (490)
                      +             +++|++|+   .|+.|++||+++......  .....|...|.+++|+|++   ++| ++++.|++|
T Consensus       156 ~~~~~~~~~~~~~~~~~l~sgs---~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~l-as~s~D~~v  231 (297)
T 2pm7_B          156 ATIEEDGEHNGTKESRKFVTGG---ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYM-ASVSQDRTC  231 (297)
T ss_dssp             CC------------CCEEEEEE---TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE-EEEETTSCE
T ss_pred             CcccccccCCCCCCcceEEEEc---CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEE-EEEECCCcE
Confidence            7             56899998   789999999987553221  1223577889999999996   555 899999999


Q ss_pred             EEEEecCCCCe--eEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCC
Q psy17682        374 RYFEITAEPPF--VHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSG  425 (490)
Q Consensus       374 ~iwd~~~~~~~--~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~  425 (490)
                      ++||+......  ...+....+...|.+++|+|++.+++++  ++.+++|+....+
T Consensus       232 ~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g  287 (297)
T 2pm7_B          232 IIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG  287 (297)
T ss_dssp             EEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred             EEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCC
Confidence            99999875321  1222212345789999999999998877  4578999987443

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=2.1e-36  Score=334.07  Aligned_cols=359  Identities=20%  Similarity=0.224  Sum_probs=277.4

Q ss_pred             eeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceecc--ccc-------
Q psy17682         26 TYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTK--RSN-------   96 (490)
Q Consensus        26 ~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~--~~~-------   96 (490)
                      ..|+..+ ......+.+|.+.|++++|+|++ ..|++++.||+|++|++...................  ...       
T Consensus       865 ~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg-~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  942 (1249)
T 3sfz_A          865 ELWNIDS-RLKVADCRGHLSWVHGVMFSPDG-SSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDN  942 (1249)
T ss_dssp             EEEETTT-TEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEES
T ss_pred             EEEEcCC-CceeeecCCCccceEEEEECCCC-CEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecC
Confidence            3444432 45667789999999999999999 899999999999999976432111111110000000  000       


Q ss_pred             ---eeecccCCC--CCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEE
Q psy17682         97 ---VLDKVGGKG--GANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDI  171 (490)
Q Consensus        97 ---~~~~~~~~~--~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~  171 (490)
                         ........+  .......+.+++++|+.     ..++++..+|.+.+|++.     .   ......+.+|.+.|.++
T Consensus       943 ~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g-----~~l~~g~~~g~i~i~d~~-----~---~~~~~~~~~h~~~v~~l 1009 (1249)
T 3sfz_A          943 IRGLQLIAGKTGQIDYLPEAQVSCCCLSPHL-----EYVAFGDEDGAIKIIELP-----N---NRVFSSGVGHKKAVRHI 1009 (1249)
T ss_dssp             SSSEEEEEESSCCEEEECCSCEEEEEECTTS-----SEEEEEETTSCCEEEETT-----T---TSCEEECCCCSSCCCCE
T ss_pred             CcceEEEecCcceEEEcccCcEEEEEEcCCC-----CEEEEEcCCCCEEEEEcC-----C---CceeeecccCCCceEEE
Confidence               000000000  01113357889999985     367788999999999985     2   22455677999999999


Q ss_pred             EECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeE
Q psy17682        172 AWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIM  251 (490)
Q Consensus       172 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~  251 (490)
                      +|+|++ .++++++.||.|++||+.+++...        ...|...|.++.|+|++  .+++++.|+.|++||+.+++.+
T Consensus      1010 ~~s~dg-~~l~s~~~dg~i~vwd~~~~~~~~--------~~~~~~~v~~~~~~~~~--~l~~~~~dg~v~vwd~~~~~~~ 1078 (1249)
T 3sfz_A         1010 QFTADG-KTLISSSEDSVIQVWNWQTGDYVF--------LQAHQETVKDFRLLQDS--RLLSWSFDGTVKVWNVITGRIE 1078 (1249)
T ss_dssp             EECSSS-SCEEEECSSSBEEEEETTTTEEEC--------CBCCSSCEEEEEECSSS--EEEEEESSSEEEEEETTTTCCC
T ss_pred             EECCCC-CEEEEEcCCCEEEEEECCCCceEE--------EecCCCcEEEEEEcCCC--cEEEEECCCcEEEEECCCCcee
Confidence            999998 899999999999999998876543        33589999999999976  6889999999999999999999


Q ss_pred             EEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEe
Q psy17682        252 IQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLR  331 (490)
Q Consensus       252 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iw  331 (490)
                      ..+.+|...|.+++|+|+++++++++.|++|++||+.+++++..+.+|.+. +.+++|+|+|++|++|+   .|+.|++|
T Consensus      1079 ~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~-v~~~~~s~dg~~lat~~---~dg~i~vw 1154 (1249)
T 3sfz_A         1079 RDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGC-VRCSAFSLDGILLATGD---DNGEIRIW 1154 (1249)
T ss_dssp             EEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSC-EEEEEECSSSSEEEEEE---TTSCCCEE
T ss_pred             EEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCc-EEEEEECCCCCEEEEEe---CCCEEEEE
Confidence            999999999999999999999999999999999999999999888888875 99999999999999998   68899999


Q ss_pred             cCCCCCCCeEE-------EeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee-eCCCceeeEEEe
Q psy17682        332 APDHLDEPIVM-------VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF-QTPDPQRGIGMM  403 (490)
Q Consensus       332 d~~~~~~~~~~-------~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~i~~~~~s  403 (490)
                      |+.+++.....       ....|...|.+++|+|+|++| ++++  |.|++||+.+++..    ..+ .+...|.+++|+
T Consensus      1155 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l-~s~~--g~v~vwd~~~g~~~----~~~~~~~~~i~~~~~s 1227 (1249)
T 3sfz_A         1155 NVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTL-VSAG--GYLKWWNVATGDSS----QTFYTNGTNLKKIHVS 1227 (1249)
T ss_dssp             ESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCE-EEES--SSEEEBCSSSCBCC----CCCCCSSCCCCCCEEC
T ss_pred             ECCCCceEEEeccccccccccccCceEEEEEECCCCCEE-EECC--CeEEEEECCCCcee----eeeeccCCcccEEEEC
Confidence            99987643322       112466779999999999999 5663  89999999998732    223 355689999999


Q ss_pred             eCceeEEeecc--eeEEEEe
Q psy17682        404 PKRGCDVNSCE--IGRFFRL  421 (490)
Q Consensus       404 p~~~~l~~~~~--~~~~~~~  421 (490)
                      |++.++++++.  .+.+|++
T Consensus      1228 ~dg~~l~~~~~dg~v~vw~l 1247 (1249)
T 3sfz_A         1228 PDFRTYVTVDNLGILYILQV 1247 (1249)
T ss_dssp             SSSCCEEEECTTCCEEEECC
T ss_pred             CCCCEEEEecCCcEEEEEee
Confidence            99998888754  6667765

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=4.1e-36  Score=288.50  Aligned_cols=296  Identities=10%  Similarity=0.061  Sum_probs=220.3

Q ss_pred             ecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEe
Q psy17682         39 DLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITI  118 (490)
Q Consensus        39 ~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  118 (490)
                      .+..|.+.|++++|+|++ .+|++|+.|+.|++||+.++...                ....+.     .+...+.+++|
T Consensus         6 ~~~~~~~~v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~~~~----------------~~~~~~-----~h~~~v~~~~~   63 (377)
T 3dwl_C            6 VLHILPKPSYEHAFNSQR-TEFVTTTATNQVELYEQDGNGWK----------------HARTFS-----DHDKIVTCVDW   63 (377)
T ss_dssp             EEEECSSCCSCCEECSSS-SEEECCCSSSCBCEEEEETTEEE----------------ECCCBC-----CCSSCEEEEEE
T ss_pred             eEecCCCcEEEEEECCCC-CEEEEecCCCEEEEEEccCCceE----------------EEEEEe-----cCCceEEEEEE
Confidence            345577899999999999 89999999999999999875200                000111     13346889999


Q ss_pred             ccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC
Q psy17682        119 SEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG  198 (490)
Q Consensus       119 s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~  198 (490)
                      +|+.     ..+++++.++.+++|++.     .++.......+.+|...|.+++|+|++ .+|++|+.|+.|++||++++
T Consensus        64 s~~~-----~~l~s~s~d~~v~vwd~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~  132 (377)
T 3dwl_C           64 APKS-----NRIVTCSQDRNAYVYEKR-----PDGTWKQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQE  132 (377)
T ss_dssp             CTTT-----CCEEEEETTSSEEEC-----------CCCCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC---
T ss_pred             eCCC-----CEEEEEeCCCeEEEEEcC-----CCCceeeeeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCc
Confidence            9985     357788899999999985     222223455677899999999999988 89999999999999999877


Q ss_pred             Ccccccccceeeecc-cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC------------------CCeeEEEEecCCC
Q psy17682        199 GISRTLTEPVVDLLY-HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG------------------TGEIMIQIECHPD  259 (490)
Q Consensus       199 ~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~------------------~~~~~~~~~~~~~  259 (490)
                      +....    ...+.+ |...|.+++|+|++. +|++++.|+.|++||++                  .++.+..+ .|..
T Consensus       133 ~~~~~----~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  206 (377)
T 3dwl_C          133 NDWWV----SKHLKRPLRSTILSLDWHPNNV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGG  206 (377)
T ss_dssp             --CCC----CEEECSSCCSCEEEEEECTTSS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSS
T ss_pred             cccee----eeEeecccCCCeEEEEEcCCCC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCc
Confidence            63111    122445 899999999999985 99999999999999985                  34566666 7999


Q ss_pred             cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce----eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCC
Q psy17682        260 IVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI----EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDH  335 (490)
Q Consensus       260 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~  335 (490)
                      .|.+++|+|++++|++++.||.|++||+++++.    +..+..|... +.+++|+|++++|++|+   .++.+ +|+...
T Consensus       207 ~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~---~~~~~-~~~~~~  281 (377)
T 3dwl_C          207 WVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLP-LRSLLWANESAIVAAGY---NYSPI-LLQGNE  281 (377)
T ss_dssp             SEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSC-EEEEEEEETTEEEEEES---SSSEE-EECCCC
T ss_pred             eEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCc-eEEEEEcCCCCEEEEEc---CCcEE-EEEeCC
Confidence            999999999999999999999999999999987    7778788775 99999999999999997   34555 666542


Q ss_pred             CCC---------------------------C---------eEEE--------------eccCCCceeeeeecCCCCe---
Q psy17682        336 LDE---------------------------P---------IVMV--------------ELDTSNGVMFPLYDPDTNL---  362 (490)
Q Consensus       336 ~~~---------------------------~---------~~~~--------------~~~~~~~i~~~~~s~~~~~---  362 (490)
                      ...                           .         ..+.              ...|...|.++.+.+....   
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~  361 (377)
T 3dwl_C          282 SGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNIT  361 (377)
T ss_dssp             ---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEE
T ss_pred             CceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceE
Confidence            110                           0         0000              0126677999987654433   


Q ss_pred             EEEEecCCCeEEEEEe
Q psy17682        363 VYLCGKGDSVIRYFEI  378 (490)
Q Consensus       363 l~~~g~~dg~i~iwd~  378 (490)
                      .+++|+.||.|++||+
T Consensus       362 ~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          362 AFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             EEEEEETTSEEEEECC
T ss_pred             EEEeecCCCcEEEecC
Confidence            3489999999999985

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=3e-34  Score=268.09  Aligned_cols=254  Identities=17%  Similarity=0.306  Sum_probs=211.2

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      ...+.+|.+.|.+++|+|++ .+|++|+.||.|++|++.+++....       +.+|...|.+++|+|++. +|++++.|
T Consensus        16 ~~~~~gh~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~~~~~~~-------~~~h~~~v~~~~~~~~~~-~l~s~~~d   86 (312)
T 4ery_A           16 KFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKT-------ISGHKLGISDVAWSSDSN-LLVSASDD   86 (312)
T ss_dssp             EEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEE-------ECCCSSCEEEEEECTTSS-EEEEEETT
T ss_pred             EEEEcccCCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCCcccchh-------hccCCCceEEEEEcCCCC-EEEEECCC
Confidence            44678999999999999988 8999999999999999988876544       456999999999999985 99999999


Q ss_pred             CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEE
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFT  317 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~  317 (490)
                      +.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|... +.++.|+|++.+|+
T Consensus        87 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~  165 (312)
T 4ery_A           87 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP-VSAVHFNRDGSLIV  165 (312)
T ss_dssp             SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEE
T ss_pred             CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCc-EEEEEEcCCCCEEE
Confidence            99999999999999999999999999999999999999999999999999999999888888765 99999999999999


Q ss_pred             EEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCce
Q psy17682        318 TGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQ  397 (490)
Q Consensus       318 ~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i  397 (490)
                      +++   .++.|++||+++.+..... ...+...+..++|+|++++| ++++.|+.|++||+.+++.. ..+.........
T Consensus       166 ~~~---~d~~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~~  239 (312)
T 4ery_A          166 SSS---YDGLCRIWDTASGQCLKTL-IDDDNPPVSFVKFSPNGKYI-LAATLDNTLKLWDYSKGKCL-KTYTGHKNEKYC  239 (312)
T ss_dssp             EEE---TTSCEEEEETTTCCEEEEE-CCSSCCCEEEEEECTTSSEE-EEEETTTEEEEEETTTTEEE-EEECSSCCSSSC
T ss_pred             EEe---CCCcEEEEECCCCceeeEE-eccCCCceEEEEECCCCCEE-EEEcCCCeEEEEECCCCcEE-EEEEecCCceEE
Confidence            998   6899999999976533222 22445678999999999998 78899999999999988632 222222221222


Q ss_pred             eeEEEe-eCceeEEeec--ceeEEEEecCCCce
Q psy17682        398 RGIGMM-PKRGCDVNSC--EIGRFFRLNNSGLC  427 (490)
Q Consensus       398 ~~~~~s-p~~~~l~~~~--~~~~~~~~~~~~~~  427 (490)
                      ....++ +++.++++++  +.+++|++.++..+
T Consensus       240 ~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~  272 (312)
T 4ery_A          240 IFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV  272 (312)
T ss_dssp             CCEEEECSSSCEEEECCTTSCEEEEETTTCCEE
T ss_pred             EEEEEEeCCCcEEEEECCCCEEEEEECCCchhh
Confidence            333444 6677888774  47899999888733

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=6.3e-34  Score=275.83  Aligned_cols=310  Identities=14%  Similarity=0.139  Sum_probs=233.9

Q ss_pred             CCcEEecccccceeeeEEecc-CCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHP-TAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST  112 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p-~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (490)
                      ......+.+|.+.|++++|+| ++ .+|++|+.||.|++||+.++.....              .               
T Consensus        33 ~~~~~~~~~h~~~v~~~~~s~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~--------------~---------------   82 (408)
T 4a11_B           33 NKDRDVERIHGGGINTLDIEPVEG-RYMLSGGSDGVIVLYDLENSSRQSY--------------Y---------------   82 (408)
T ss_dssp             CTTEEECCCCSSCEEEEEECTTTC-CEEEEEETTSCEEEEECCCCSSSSC--------------E---------------
T ss_pred             CcceeeeeccCCcEEEEEEecCCC-CEEEEEcCCCeEEEEECCCCcccce--------------E---------------
Confidence            456778899999999999999 77 8999999999999999987652110              0               


Q ss_pred             CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEE
Q psy17682        113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKV  192 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~i  192 (490)
                          ...        . .         ...              ......+|...|.+++|+|++..+|++++.||.|++
T Consensus        83 ----~~~--------~-~---------~~~--------------~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~i  126 (408)
T 4a11_B           83 ----TCK--------A-V---------CSI--------------GRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKV  126 (408)
T ss_dssp             ----EEC--------E-E---------EEE--------------CTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEE
T ss_pred             ----ecc--------c-c---------ccc--------------cccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEE
Confidence                000        0 0         000              001124799999999999955589999999999999


Q ss_pred             EECCCCCcccccccceeeecccccCEEEEEEeeCCC--CEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC
Q psy17682        193 WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQ--NVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG  270 (490)
Q Consensus       193 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~--~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~  270 (490)
                      ||+.+++....+.        +...+.++.|+|.+.  .++++++.|+.|++||+++++.+..+..|...|.+++|+|++
T Consensus       127 wd~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~  198 (408)
T 4a11_B          127 WDTNTLQTADVFN--------FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRY  198 (408)
T ss_dssp             EETTTTEEEEEEE--------CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSC
T ss_pred             eeCCCCccceecc--------CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCC
Confidence            9999877655432        778899999998642  389999999999999999999999999999999999999999


Q ss_pred             C-EEEEEeCCCeEEEEeCCCCc-eeeee---------------eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecC
Q psy17682        271 S-KLLTTCKDKKMRIINPRTGA-IEEEA---------------VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAP  333 (490)
Q Consensus       271 ~-~l~~~~~dg~i~iwd~~~~~-~~~~~---------------~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~  333 (490)
                      + +|++++.||.|++||++++. ....+               ..|.. .+.+++|+|++.+|++++   .++.|++||+
T Consensus       199 ~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~---~dg~i~vwd~  274 (408)
T 4a11_B          199 DYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNG-KVNGLCFTSDGLHLLTVG---TDNRMRLWNS  274 (408)
T ss_dssp             TTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSS-CEEEEEECTTSSEEEEEE---TTSCEEEEET
T ss_pred             CcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccC-ceeEEEEcCCCCEEEEec---CCCeEEEEEC
Confidence            8 58999999999999998765 33333               34444 499999999999999998   6889999999


Q ss_pred             CCCCCCeEEEecc---CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEE
Q psy17682        334 DHLDEPIVMVELD---TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDV  410 (490)
Q Consensus       334 ~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~  410 (490)
                      .+...........   ....+........+..+ ++++.|+.|++||+.+++++ ..+.  .+...|++++|+|++.+++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~d~~~~~~~-~~~~--~~~~~v~~~~~s~~~~~l~  350 (408)
T 4a11_B          275 SNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEF-VFVPYGSTIAVYTVYSGEQI-TMLK--GHYKTVDCCVFQSNFQELY  350 (408)
T ss_dssp             TTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCE-EEEEETTEEEEEETTTCCEE-EEEC--CCSSCEEEEEEETTTTEEE
T ss_pred             CCCccceeccccccccccccceeEEecCCCceE-EEEecCCEEEEEECcCCcce-eeec--cCCCeEEEEEEcCCCCEEE
Confidence            9876433222111   11112222222333444 45677999999999998732 2222  3557899999999999888


Q ss_pred             ee--cceeEEEEecCCC
Q psy17682        411 NS--CEIGRFFRLNNSG  425 (490)
Q Consensus       411 ~~--~~~~~~~~~~~~~  425 (490)
                      ++  ++.+++|++...+
T Consensus       351 s~~~dg~i~iw~~~~~~  367 (408)
T 4a11_B          351 SGSRDCNILAWVPSLYE  367 (408)
T ss_dssp             EEETTSCEEEEEECC--
T ss_pred             EECCCCeEEEEeCCCCC
Confidence            87  4588999999876

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=1.9e-34  Score=299.11  Aligned_cols=254  Identities=18%  Similarity=0.170  Sum_probs=209.6

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      .....+.+|...|++++|+|++ .+|+||+.|++|+|||+.++.                                    
T Consensus       421 ~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg~v~vwd~~~~~------------------------------------  463 (694)
T 3dm0_A          421 VAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDGELRLWDLAAGV------------------------------------  463 (694)
T ss_dssp             EEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE------------------------------------
T ss_pred             cccceecCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEECCCCc------------------------------------
Confidence            3456799999999999999999 899999999999999997643                                    


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                                                                ....+.+|.+.|.+++|+|++ .+|++|+.|++|++||
T Consensus       464 ------------------------------------------~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd  500 (694)
T 3dm0_A          464 ------------------------------------------STRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWN  500 (694)
T ss_dssp             ------------------------------------------EEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEEC
T ss_pred             ------------------------------------------ceeEEeCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEE
Confidence                                                      011346899999999999988 8999999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCC-CEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQ-NVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  273 (490)
                      +....... +.   ....+|...|.+++|+|++. ..+++++.|+.|++||+++++....+.+|...|++++|+|++++|
T Consensus       501 ~~~~~~~~-~~---~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l  576 (694)
T 3dm0_A          501 TLGECKYT-IS---EGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLC  576 (694)
T ss_dssp             TTSCEEEE-EC---SSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred             CCCCccee-ec---cCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEE
Confidence            75432211 11   11246889999999999862 489999999999999999999999999999999999999999999


Q ss_pred             EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec--------
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL--------  345 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~--------  345 (490)
                      ++++.||+|++||+++++.+..+..+.  .+.+++|+|++.+++++.    ++.|++||+++......+...        
T Consensus       577 ~sg~~Dg~i~iwd~~~~~~~~~~~~~~--~v~~~~~sp~~~~l~~~~----~~~i~iwd~~~~~~~~~~~~~~~~~~~~~  650 (694)
T 3dm0_A          577 ASGGKDGVVLLWDLAEGKKLYSLEANS--VIHALCFSPNRYWLCAAT----EHGIKIWDLESKSIVEDLKVDLKAEAEKA  650 (694)
T ss_dssp             EEEETTSBCEEEETTTTEEEECCBCSS--CEEEEEECSSSSEEEEEE----TTEEEEEETTTTEEEEEECCCCC------
T ss_pred             EEEeCCCeEEEEECCCCceEEEecCCC--cEEEEEEcCCCcEEEEEc----CCCEEEEECCCCCChhhhccccccccccc
Confidence            999999999999999999887776443  499999999999999886    567999999876432221100        


Q ss_pred             ---------cCCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        346 ---------DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       346 ---------~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                               .+...+.+++|+|+|++| ++|+.||.|++|++.
T Consensus       651 ~~~~~~~~~~~~~~~~~l~~spdg~~l-~sgs~Dg~i~iW~i~  692 (694)
T 3dm0_A          651 DNSGPAATKRKVIYCTSLNWSADGSTL-FSGYTDGVIRVWGIG  692 (694)
T ss_dssp             ----------CCCCEEEEEECTTSSEE-EEEETTSEEEEEEC-
T ss_pred             cccccccCCceeEEeeeEEEcCCCCEE-EEEcCCCeEEEEecc
Confidence                     011136789999999999 799999999999985

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2e-34  Score=276.47  Aligned_cols=258  Identities=21%  Similarity=0.253  Sum_probs=212.6

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      ++..+.+|.+.|++++|+|++ .+|++|+.||.|++||+..+..                                    
T Consensus         3 ~~~~~~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~------------------------------------   45 (379)
T 3jrp_A            3 MVVIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETH------------------------------------   45 (379)
T ss_dssp             --CCEEECCCCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEE------------------------------------
T ss_pred             ccEEecCCcccEEEEEEcCCC-CEEEEEECCCcEEEEecCCCcc------------------------------------
Confidence            456789999999999999999 8999999999999999864210                                    


Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCC--CCCEEEEEeCCCcEEEE
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPH--DDNVIASGSEDCVVKVW  193 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~--~~~~l~s~~~dg~i~iw  193 (490)
                                                              .....+.+|.+.|.+++|+|+  + .+|++|+.||.|++|
T Consensus        46 ----------------------------------------~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iw   84 (379)
T 3jrp_A           46 ----------------------------------------KLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIW   84 (379)
T ss_dssp             ----------------------------------------EEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSCEEEE
T ss_pred             ----------------------------------------eeeeEecCCCCcEEEEEeCCCCCC-CEEEEeccCCEEEEE
Confidence                                                    011245689999999999986  6 899999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeC--CCCEEEEEeCCCcEEEEECCCCe--eEEEEecCCCcEEEEEEcC-
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT--AQNVLLTAGSDNNVAIWNVGTGE--IMIQIECHPDIVYSASWNW-  268 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~-  268 (490)
                      |+.+++..     ....+..|...|.+++|+|+  + .+|++++.|+.|++||++++.  ....+..|...|.+++|+| 
T Consensus        85 d~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~  158 (379)
T 3jrp_A           85 KEENGRWS-----QIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA  158 (379)
T ss_dssp             EEETTEEE-----EEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCC
T ss_pred             EcCCCcee-----EeeeecCCCcceEEEEeCCCCCC-CEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCc
Confidence            99877521     22235569999999999999  7 499999999999999998873  4455678999999999999 


Q ss_pred             ------------CCCEEEEEeCCCeEEEEeCCCCc----eeeeeeecCCCceeEEEEeCC---CcEEEEEeCCCceeEEE
Q psy17682        269 ------------DGSKLLTTCKDKKMRIINPRTGA----IEEEAVCHEGSKATRAIYLKS---GLIFTTGFSKMSERQYS  329 (490)
Q Consensus       269 ------------~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~s~~---~~~l~~~~~~~~~~~i~  329 (490)
                                  ++.+|++++.||.|++||++++.    ....+..|... +.+++|+|+   +.+|++++   .|+.|+
T Consensus       159 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~-v~~~~~sp~~~~~~~l~s~~---~dg~i~  234 (379)
T 3jrp_A          159 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW-VRDVAWSPTVLLRSYLASVS---QDRTCI  234 (379)
T ss_dssp             C----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC-EEEEEECCCCSSSEEEEEEE---TTSCEE
T ss_pred             cccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCc-EeEEEECCCCCCCCeEEEEe---CCCEEE
Confidence                        69999999999999999998765    33455567665 999999999   89999998   689999


Q ss_pred             EecCCCCCCCeEEEec---cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        330 LRAPDHLDEPIVMVEL---DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       330 iwd~~~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      +||++....+......   .+...+.+++|+|++++| ++++.||.|++|++..+.
T Consensus       235 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~~~~dg~i~iw~~~~~~  289 (379)
T 3jrp_A          235 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVL-ALSGGDNKVTLWKENLEG  289 (379)
T ss_dssp             EEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCE-EEEESSSSEEEEEEEETT
T ss_pred             EEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEE-EEecCCCcEEEEeCCCCC
Confidence            9999986544333322   366779999999999998 678889999999999754

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.1e-34  Score=280.64  Aligned_cols=283  Identities=15%  Similarity=0.210  Sum_probs=230.7

Q ss_pred             ccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccc
Q psy17682         43 HQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDY  122 (490)
Q Consensus        43 H~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  122 (490)
                      |.+.|++++|+|++ .+|++|+.||.|++||.. +.                  ....+..     +...+.+++|+|+.
T Consensus       107 ~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~~~~-~~------------------~~~~~~~-----~~~~v~~~~~~~~~  161 (425)
T 1r5m_A          107 TTNQVTCLAWSHDG-NSIVTGVENGELRLWNKT-GA------------------LLNVLNF-----HRAPIVSVKWNKDG  161 (425)
T ss_dssp             -CBCEEEEEECTTS-SEEEEEETTSCEEEEETT-SC------------------EEEEECC-----CCSCEEEEEECTTS
T ss_pred             CCCceEEEEEcCCC-CEEEEEeCCCeEEEEeCC-CC------------------eeeeccC-----CCccEEEEEECCCC
Confidence            78899999999998 899999999999999933 22                  1111111     23468899999985


Q ss_pred             ccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCC---------------eeEEEECCCCCCEEEEEeCC
Q psy17682        123 VKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGP---------------VLDIAWSPHDDNVIASGSED  187 (490)
Q Consensus       123 ~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~---------------V~~~~~~p~~~~~l~s~~~d  187 (490)
                           ..+++++.++.+.+|++.     .+   .....+..|...               +.+++|+|++  .+++++.|
T Consensus       162 -----~~l~~~~~d~~i~iwd~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  226 (425)
T 1r5m_A          162 -----THIISMDVENVTILWNVI-----SG---TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPK  226 (425)
T ss_dssp             -----SEEEEEETTCCEEEEETT-----TT---EEEEEECCC---------------CCCBSCCEEEETT--EEEEECGG
T ss_pred             -----CEEEEEecCCeEEEEECC-----CC---cEEEEeeccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCC
Confidence                 356678899999999985     22   233445556655               9999999864  68999999


Q ss_pred             CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEc
Q psy17682        188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWN  267 (490)
Q Consensus       188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~  267 (490)
                      |.|++||+.+++....       +..|...|.+++|+|++. +|++++.|+.|++||+++++.+..+..|...|.+++|+
T Consensus       227 g~i~~~d~~~~~~~~~-------~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~  298 (425)
T 1r5m_A          227 GAIFVYQITEKTPTGK-------LIGHHGPISVLEFNDTNK-LLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWV  298 (425)
T ss_dssp             GCEEEEETTCSSCSEE-------ECCCSSCEEEEEEETTTT-EEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEE
T ss_pred             CeEEEEEcCCCceeee-------eccCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEEC
Confidence            9999999988766544       445999999999999985 99999999999999999999999999999999999999


Q ss_pred             CCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCC--------
Q psy17682        268 WDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEP--------  339 (490)
Q Consensus       268 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~--------  339 (490)
                      |++ .+++++.|+.|++||+++++.+..+..|... +.+++|+|++.+|++++   .++.|++||+.+...+        
T Consensus       299 ~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-i~~~~~s~~~~~l~~~~---~dg~i~i~~~~~~~~~~~~~~~~~  373 (425)
T 1r5m_A          299 GDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVP-IFAGRISQDGQKYAVAF---MDGQVNVYDLKKLNSKSRSLYGNR  373 (425)
T ss_dssp             TTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCC-EEEEEECTTSSEEEEEE---TTSCEEEEECHHHHC---------
T ss_pred             CCC-EEEEEeCCCcEEEEECCCCcEeEecccCCcc-EEEEEEcCCCCEEEEEE---CCCeEEEEECCCCccceeeeeccc
Confidence            999 9999999999999999999999888877765 99999999999999998   6889999999865410        


Q ss_pred             ----------eEEEeccCCC--ceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        340 ----------IVMVELDTSN--GVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       340 ----------~~~~~~~~~~--~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                                .......+..  .|.+++|+|++++| ++++.||.|++|++.
T Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iw~~~  424 (425)
T 1r5m_A          374 DGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKI-SVAYSLQEGSVVAIP  424 (425)
T ss_dssp             -----CEECCEEEEECCTTCCCCEEEEEECTTSSEE-EEEESSSCCEEEECC
T ss_pred             ccccCcccchhhhhhcCcccCCceEEEEccCCCceE-EEEecCceEEEEeec
Confidence                      1112223433  89999999999998 788999999999985

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=1.4e-34  Score=276.05  Aligned_cols=306  Identities=10%  Similarity=0.058  Sum_probs=213.1

Q ss_pred             ceeeeEEeccCCCceEEeeeCCC-------eEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeE
Q psy17682         45 RRVGLVLWHPTAQNVLLTAGKEA-------EPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEIT  117 (490)
Q Consensus        45 ~~V~~v~~~p~~~~~l~s~~~D~-------~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  117 (490)
                      -+|.+++|+|++ .+|++||.|.       .|++|++..+.....      ........  ..+.     .....+.+++
T Consensus        15 ~PV~sv~fs~dg-~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~------~~~~~~~~--~~l~-----~~~~~v~s~~   80 (365)
T 4h5i_A           15 YPAYGAKFLNND-TLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEK------EQFHILSE--FALE-----DNDDSPTAID   80 (365)
T ss_dssp             SCEEEEEEEETT-EEEEEEECCSSSSSCCEEEEEEEECTTSSSHH------HHEEEEEE--EECC-----TTSCCCCEEE
T ss_pred             CCEEEEEEeCCC-cEEEEECCCccccCCCCEEEEEEEcCCCccee------eeeeeeeE--EEcc-----CCCCceEEEE
Confidence            379999999999 8999987643       599999876542110      00000000  0011     1122456666


Q ss_pred             eccccc----cceEEEEEeeCCCceEEEECCCCCCCCcccC-CCCcceeecccCCeeEEEECCCCCCEEEE--EeCCCcE
Q psy17682        118 ISEDYV----KEFKEEIRKLKSQQALSILPPPSTAPNTGRI-NADHALVGGHKGPVLDIAWSPHDDNVIAS--GSEDCVV  190 (490)
Q Consensus       118 ~s~~~~----~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~-~~~~~~~~~h~~~V~~~~~~p~~~~~l~s--~~~dg~i  190 (490)
                      ++++..    ......++.+..++.+++|++.......... .........+...+.+++|+||| +++++  ++.|++|
T Consensus        81 ~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg-~~la~as~~~d~~i  159 (365)
T 4h5i_A           81 ASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG-TVAAIASSKVPAIM  159 (365)
T ss_dssp             EETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS-SCEEEEESCSSCEE
T ss_pred             eCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC-CEEEEEECCCCCEE
Confidence            655420    0000113345667889999875221110000 00111223456679999999999 66654  4578999


Q ss_pred             EEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEE--EecCCCcEEEEEEcC
Q psy17682        191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQ--IECHPDIVYSASWNW  268 (490)
Q Consensus       191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~  268 (490)
                      +|||+++++.+..+.        |...|.+++|+|++. ++++++. +.+++|+..+++.+..  ...|...|.+++|+|
T Consensus       160 ~iwd~~~~~~~~~~~--------~~~~V~~v~fspdg~-~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fsp  229 (365)
T 4h5i_A          160 RIIDPSDLTEKFEIE--------TRGEVKDLHFSTDGK-VVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIA  229 (365)
T ss_dssp             EEEETTTTEEEEEEE--------CSSCCCEEEECTTSS-EEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEE
T ss_pred             EEeECCCCcEEEEeC--------CCCceEEEEEccCCc-eEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcC
Confidence            999999887655432        778899999999995 8888875 5577777777765543  346888899999999


Q ss_pred             CCCEEEEEeCCC----eEEEEeCCCCce----eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe
Q psy17682        269 DGSKLLTTCKDK----KMRIINPRTGAI----EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI  340 (490)
Q Consensus       269 ~~~~l~~~~~dg----~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~  340 (490)
                      +++.+++++.|+    .+++||+.....    ...+..|... +++++|+|+|++|++|+   .|+.|+|||+++++...
T Consensus       230 dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-V~~~~~Spdg~~lasgs---~D~~V~iwd~~~~~~~~  305 (365)
T 4h5i_A          230 DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKG-ITSMDVDMKGELAVLAS---NDNSIALVKLKDLSMSK  305 (365)
T ss_dssp             TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSC-EEEEEECTTSCEEEEEE---TTSCEEEEETTTTEEEE
T ss_pred             CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCC-eEeEEECCCCCceEEEc---CCCEEEEEECCCCcEEE
Confidence            999999999887    688999887653    2344466654 99999999999999999   68999999999865322


Q ss_pred             EEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        341 VMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       341 ~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      . ....|...|++++|+|||++| ++|+.|++|+|||+...
T Consensus       306 ~-~~~gH~~~V~~v~fSpdg~~l-aS~S~D~tvrvw~ip~~  344 (365)
T 4h5i_A          306 I-FKQAHSFAITEVTISPDSTYV-ASVSAANTIHIIKLPLN  344 (365)
T ss_dssp             E-ETTSSSSCEEEEEECTTSCEE-EEEETTSEEEEEECCTT
T ss_pred             E-ecCcccCCEEEEEECCCCCEE-EEEeCCCeEEEEEcCCC
Confidence            2 223578889999999999999 89999999999999754

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=1.1e-33  Score=267.26  Aligned_cols=292  Identities=14%  Similarity=0.227  Sum_probs=232.8

Q ss_pred             ccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC
Q psy17682        109 RNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC  188 (490)
Q Consensus       109 ~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg  188 (490)
                      +...|++++|+|+..    ..+++++.|+.|++|++.......   ......+.+|.+.|.+++|+|++ .+|++|+.|+
T Consensus        37 H~~~V~~v~~sp~~~----~~l~S~s~D~~i~vWd~~~~~~~~---~~~~~~l~~h~~~V~~~~~s~dg-~~l~s~~~d~  108 (340)
T 4aow_A           37 HNGWVTQIATTPQFP----DMILSASRDKTIIMWKLTRDETNY---GIPQRALRGHSHFVSDVVISSDG-QFALSGSWDG  108 (340)
T ss_dssp             CSSCEEEEEECTTCT----TEEEEEETTSCEEEEEECCSSSCS---EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTS
T ss_pred             ccCCEEEEEEeCCCC----CEEEEEcCCCeEEEEECCCCCccc---ceeeEEEeCCCCCEEEEEECCCC-CEEEEEcccc
Confidence            445799999999741    367889999999999986322111   12456788999999999999998 8999999999


Q ss_pred             cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeE-EEEecCCCcEEEEEEc
Q psy17682        189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIM-IQIECHPDIVYSASWN  267 (490)
Q Consensus       189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~~~~~v~~~~~~  267 (490)
                      .|++|+.........       ...+...+..+.+++++. +|++++.|+.+++||+...... ....+|...+..++|+
T Consensus       109 ~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~  180 (340)
T 4aow_A          109 TLRLWDLTTGTTTRR-------FVGHTKDVLSVAFSSDNR-QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFS  180 (340)
T ss_dssp             EEEEEETTTTEEEEE-------EECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEEC
T ss_pred             cceEEeecccceeee-------ecCCCCceeEEEEeecCc-cceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEc
Confidence            999999877655433       334778889999999985 8999999999999999766543 3345789999999999


Q ss_pred             CCC--CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec
Q psy17682        268 WDG--SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL  345 (490)
Q Consensus       268 ~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~  345 (490)
                      +++  .++++++.|+.|++||+++++....+.+|.+. +.+++|+|++++|++|+   .|+.|++||+++...   ....
T Consensus       181 ~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~-v~~~~~s~~~~~l~s~s---~Dg~i~iwd~~~~~~---~~~~  253 (340)
T 4aow_A          181 PNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY-LNTVTVSPDGSLCASGG---KDGQAMLWDLNEGKH---LYTL  253 (340)
T ss_dssp             SCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSC-EEEEEECTTSSEEEEEE---TTCEEEEEETTTTEE---EEEE
T ss_pred             cCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCc-EEEEEECCCCCEEEEEe---CCCeEEEEEeccCce---eeee
Confidence            865  57889999999999999999999999888875 99999999999999998   789999999987653   3344


Q ss_pred             cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEe------eeeeCCCceeeEEEeeCceeEEee--cceeE
Q psy17682        346 DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI------NTFQTPDPQRGIGMMPKRGCDVNS--CEIGR  417 (490)
Q Consensus       346 ~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~------~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~  417 (490)
                      .+...+..+.|+|++.++  +++.|+.|++||++.+.......      ....+...|++++|+|++.+++++  ++.++
T Consensus       254 ~~~~~v~~~~~~~~~~~~--~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~  331 (340)
T 4aow_A          254 DGGDIINALCFSPNRYWL--CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVR  331 (340)
T ss_dssp             ECSSCEEEEEECSSSSEE--EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             cCCceEEeeecCCCCcee--eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence            556789999999988665  45679999999998765221111      112345689999999999998887  45889


Q ss_pred             EEEecCCC
Q psy17682        418 FFRLNNSG  425 (490)
Q Consensus       418 ~~~~~~~~  425 (490)
                      +|++.+++
T Consensus       332 iW~~~tGt  339 (340)
T 4aow_A          332 VWQVTIGT  339 (340)
T ss_dssp             EEEEEC--
T ss_pred             EEeCCCcC
Confidence            99999875

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=1.6e-33  Score=297.82  Aligned_cols=304  Identities=16%  Similarity=0.168  Sum_probs=242.4

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK  104 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (490)
                      +..|+..+ ...+..+.+|...|++++|+|++ .+|++|+.||.|++||+.++..                  ...... 
T Consensus        37 v~iwd~~~-~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~------------------~~~~~~-   95 (814)
T 3mkq_A           37 VEIWNYET-QVEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGEK------------------VVDFEA-   95 (814)
T ss_dssp             EEEEETTT-TEEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCCE------------------EEEEEC-
T ss_pred             EEEEECCC-CceEEEEecCCCcEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcE------------------EEEEec-
Confidence            45566543 45677888999999999999999 8999999999999999987651                  111111 


Q ss_pred             CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECC-CCCCEEEE
Q psy17682        105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSP-HDDNVIAS  183 (490)
Q Consensus       105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p-~~~~~l~s  183 (490)
                          +...+.+++|+|+.     ..+++++.+|.+.+|++.    . +  ......+.+|...|.+++|+| ++ ..+++
T Consensus        96 ----~~~~v~~~~~s~~~-----~~l~~~~~dg~i~vw~~~----~-~--~~~~~~~~~~~~~v~~~~~~p~~~-~~l~~  158 (814)
T 3mkq_A           96 ----HPDYIRSIAVHPTK-----PYVLSGSDDLTVKLWNWE----N-N--WALEQTFEGHEHFVMCVAFNPKDP-STFAS  158 (814)
T ss_dssp             ----CSSCEEEEEECSSS-----SEEEEEETTSEEEEEEGG----G-T--SEEEEEEECCSSCEEEEEEETTEE-EEEEE
T ss_pred             ----CCCCEEEEEEeCCC-----CEEEEEcCCCEEEEEECC----C-C--ceEEEEEcCCCCcEEEEEEEcCCC-CEEEE
Confidence                23468899999985     256788999999999985    1 1  124456789999999999999 55 89999


Q ss_pred             EeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEee--CCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcE
Q psy17682        184 GSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP--TAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIV  261 (490)
Q Consensus       184 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v  261 (490)
                      ++.||+|++||+.++.....+.      ..+...+.+++|+|  ++. ++++++.||.|++||+++++.+..+.+|...|
T Consensus       159 ~~~dg~v~vwd~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v  231 (814)
T 3mkq_A          159 GCLDRTVKVWSLGQSTPNFTLT------TGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQTKSCVATLEGHMSNV  231 (814)
T ss_dssp             EETTSEEEEEETTCSSCSEEEE------CCCTTCCCEEEECCSTTCC-EEEEECTTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred             EeCCCeEEEEECCCCcceeEEe------cCCCCCEEEEEEEECCCCC-EEEEEeCCCEEEEEECCCCcEEEEEcCCCCCE
Confidence            9999999999998776544432      22448899999999  775 99999999999999999999999999999999


Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc--EEEEEeCCCceeEEEEecCCCCCCC
Q psy17682        262 YSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL--IFTTGFSKMSERQYSLRAPDHLDEP  339 (490)
Q Consensus       262 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~l~~~~~~~~~~~i~iwd~~~~~~~  339 (490)
                      .+++|+|++++|++++.||.|++||+.+++....+..+... +.+++|+|++.  +++++.    ++.+.+|++......
T Consensus       232 ~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  306 (814)
T 3mkq_A          232 SFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLER-SWCIATHPTGRKNYIASGF----DNGFTVLSLGNDEPT  306 (814)
T ss_dssp             EEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSS-EEEEEECTTCGGGEEEEEE----TTEEEEEECSCCSCC
T ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCc-EEEEEEccCCCceEEEEEe----CCCEEEEEcCCCCce
Confidence            99999999999999999999999999999999888877664 99999999987  577775    666788887653322


Q ss_pred             eEEE-----------------------------------------eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEe
Q psy17682        340 IVMV-----------------------------------------ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEI  378 (490)
Q Consensus       340 ~~~~-----------------------------------------~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~  378 (490)
                      ....                                         ...+...+..++|+|+|+++ ++++ |+.+.+|++
T Consensus       307 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l-a~~~-~~~~~i~~~  384 (814)
T 3mkq_A          307 LSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFV-TVVG-DGEYVIYTA  384 (814)
T ss_dssp             EEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEE-EEEE-TTEEEEEET
T ss_pred             eEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEE-EEec-CCEEEEEEC
Confidence            1110                                         01122347889999999998 5555 899999997


Q ss_pred             cC
Q psy17682        379 TA  380 (490)
Q Consensus       379 ~~  380 (490)
                      ..
T Consensus       385 ~~  386 (814)
T 3mkq_A          385 LA  386 (814)
T ss_dssp             TT
T ss_pred             cc
Confidence            54

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=5.8e-34  Score=275.36  Aligned_cols=297  Identities=10%  Similarity=0.061  Sum_probs=231.5

Q ss_pred             ccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCC---CC---CEEE
Q psy17682        109 RNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPH---DD---NVIA  182 (490)
Q Consensus       109 ~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~---~~---~~l~  182 (490)
                      +...|.+++|+|.       .+++++.+|.|++|++.....  .........+.+|...|.+++|+|+   ++   .+|+
T Consensus        15 h~~~i~~~~~~~~-------~l~s~~~dg~i~iw~~~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~   85 (397)
T 1sq9_A           15 HDADIFSVSACNS-------FTVSCSGDGYLKVWDNKLLDN--ENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA   85 (397)
T ss_dssp             SSSCEEEEEECSS-------EEEEEETTSEEEEEESBCCTT--CCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred             hhcCeEEEEecCC-------eEEEEcCCCEEEEEECCCccc--ccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence            3457899999984       688899999999999862211  0111245677899999999999996   24   5899


Q ss_pred             EEeCCCcEEEEECCCCCcccccccceeeeccc-----ccCEEEEEEe----eCCCCE-EEEEeCCCcEEEEECCC-----
Q psy17682        183 SGSEDCVVKVWQIPDGGISRTLTEPVVDLLYH-----QRRVGLVLWH----PTAQNV-LLTAGSDNNVAIWNVGT-----  247 (490)
Q Consensus       183 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~----p~~~~~-l~s~~~dg~v~iwd~~~-----  247 (490)
                      +++.||.|++|++.+++....  .....+..|     ...|.+++|+    |++. + |++++.||.|++||+++     
T Consensus        86 s~~~dg~i~iw~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~  162 (397)
T 1sq9_A           86 TTSFSGDLLFYRITREDETKK--VIFEKLDLLDSDMKKHSFWALKWGASNDRLLS-HRLVATDVKGTTYIWKFHPFADES  162 (397)
T ss_dssp             EEETTSCEEEEEEEECTTTCC--EEEEEECCSCTTGGGSCEEEEEEECCC----C-EEEEEEETTSCEEEEEEESSSSHH
T ss_pred             EEcCCCCEEEEEccCCccccc--ccceeecccccccCCCcEEEEEEeeccCCCCc-eEEEEEeCCCcEEEEeCCcccccc
Confidence            999999999999988765110  112234457     5899999999    9986 7 99999999999999988     


Q ss_pred             -CeeEE-----EEe-------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeee---c---CCCceeEEE
Q psy17682        248 -GEIMI-----QIE-------CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVC---H---EGSKATRAI  308 (490)
Q Consensus       248 -~~~~~-----~~~-------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~---~~~~~~~~~  308 (490)
                       ++.+.     .+.       .|...|.+++|+|++ +|++++.||.|++||+++++.+..+..   |   ... +.+++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~-i~~i~  240 (397)
T 1sq9_A          163 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS-IRSVK  240 (397)
T ss_dssp             HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCC-EEEEE
T ss_pred             ccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCc-cceEE
Confidence             66555     663       488899999999999 999999999999999999999988887   6   554 99999


Q ss_pred             EeCCCcEEEEEeCCCce---eEEEEecCCCCCCCeEEEec-----------cCCCceeeeeecCCCCeEEEEecCCCeEE
Q psy17682        309 YLKSGLIFTTGFSKMSE---RQYSLRAPDHLDEPIVMVEL-----------DTSNGVMFPLYDPDTNLVYLCGKGDSVIR  374 (490)
Q Consensus       309 ~s~~~~~l~~~~~~~~~---~~i~iwd~~~~~~~~~~~~~-----------~~~~~i~~~~~s~~~~~l~~~g~~dg~i~  374 (490)
                      |+|++.+|++++   .+   +.|++||+++.+....+...           .|...|.+++|+|++++| ++++.||.|+
T Consensus       241 ~~~~~~~l~~~~---~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~  316 (397)
T 1sq9_A          241 FSPQGSLLAIAH---DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETL-CSAGWDGKLR  316 (397)
T ss_dssp             ECSSTTEEEEEE---EETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEE-EEEETTSEEE
T ss_pred             ECCCCCEEEEEe---cCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEE-EEEeCCCeEE
Confidence            999999999998   67   99999999976533322210           067789999999999998 7889999999


Q ss_pred             EEEecCCCCeeEEeee----eeC---------------CCceeeEEEeeCc----------eeEEee--cceeEEEEecC
Q psy17682        375 YFEITAEPPFVHYINT----FQT---------------PDPQRGIGMMPKR----------GCDVNS--CEIGRFFRLNN  423 (490)
Q Consensus       375 iwd~~~~~~~~~~~~~----~~~---------------~~~i~~~~~sp~~----------~~l~~~--~~~~~~~~~~~  423 (490)
                      +||+.+++... .+..    ..+               ..+|++++|+|++          .+++++  ++.+++|++.+
T Consensus       317 iwd~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~  395 (397)
T 1sq9_A          317 FWDVKTKERIT-TLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG  395 (397)
T ss_dssp             EEETTTTEEEE-EEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred             EEEcCCCceeE-EEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence            99999886332 2220    023               6789999999998          577766  55889999987


Q ss_pred             C
Q psy17682        424 S  424 (490)
Q Consensus       424 ~  424 (490)
                      +
T Consensus       396 g  396 (397)
T 1sq9_A          396 G  396 (397)
T ss_dssp             -
T ss_pred             C
Confidence            5

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=1e-33  Score=276.55  Aligned_cols=273  Identities=14%  Similarity=0.243  Sum_probs=220.9

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      ...+.+|.+.|++++|+|++..+|++++.||.|++|++.......                    .              
T Consensus       121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~--------------------~--------------  166 (430)
T 2xyi_A          121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKP--------------------E--------------  166 (430)
T ss_dssp             EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSC--------------------C--------------
T ss_pred             EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCccccc--------------------C--------------
Confidence            456789999999999999855899999999999999997632100                    0              


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP  196 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~  196 (490)
                                                       ..+ .......+.+|...|.+++|+|++..+|++|+.||.|++|++.
T Consensus       167 ---------------------------------~~~-~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~  212 (430)
T 2xyi_A          167 ---------------------------------PSG-ECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDIN  212 (430)
T ss_dssp             ---------------------------------TTC-CCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETT
T ss_pred             ---------------------------------ccc-cCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCC
Confidence                                             000 0123446679999999999999985599999999999999998


Q ss_pred             CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC---eeEEEEecCCCcEEEEEEcCCCC-E
Q psy17682        197 DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG---EIMIQIECHPDIVYSASWNWDGS-K  272 (490)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~  272 (490)
                      .+........+...+.+|...|.+++|+|++.++|++++.|+.|++||++++   +.+..+..|...|++++|+|+++ +
T Consensus       213 ~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~  292 (430)
T 2xyi_A          213 ATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFI  292 (430)
T ss_dssp             SCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTE
T ss_pred             CCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCE
Confidence            7654333223344566799999999999966679999999999999999987   57778888999999999999887 6


Q ss_pred             EEEEeCCCeEEEEeCCC-CceeeeeeecCCCceeEEEEeCCCc-EEEEEeCCCceeEEEEecCCCCCC------------
Q psy17682        273 LLTTCKDKKMRIINPRT-GAIEEEAVCHEGSKATRAIYLKSGL-IFTTGFSKMSERQYSLRAPDHLDE------------  338 (490)
Q Consensus       273 l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~~~~~~~~~~i~iwd~~~~~~------------  338 (490)
                      |++|+.||.|++||+++ ..++..+..|... +.++.|+|++. +|++++   .++.|++||+.....            
T Consensus       293 l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~-v~~i~~sp~~~~~l~s~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~  368 (430)
T 2xyi_A          293 LATGSADKTVALWDLRNLKLKLHSFESHKDE-IFQVQWSPHNETILASSG---TDRRLHVWDLSKIGEEQSTEDAEDGPP  368 (430)
T ss_dssp             EEEEETTSEEEEEETTCTTSCSEEEECCSSC-EEEEEECSSCTTEEEEEE---TTSCCEEEEGGGTTCCCCHHHHHHCCT
T ss_pred             EEEEeCCCeEEEEeCCCCCCCeEEeecCCCC-EEEEEECCCCCCEEEEEe---CCCcEEEEeCCCCccccCccccccCCc
Confidence            88999999999999998 5667788878775 99999999985 688887   689999999987332            


Q ss_pred             CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        339 PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       339 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      ........|...|..++|+|++++++++++.||.|++|++...
T Consensus       369 ~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~  411 (430)
T 2xyi_A          369 ELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN  411 (430)
T ss_dssp             TEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred             ceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence            2233333566779999999999965689999999999999753

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=9.8e-34  Score=268.06  Aligned_cols=265  Identities=14%  Similarity=0.138  Sum_probs=213.1

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      ...+.||.+.|++++|+|++ .+|++|+.||.|++||+.++...                                    
T Consensus         4 ~~~~~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~------------------------------------   46 (351)
T 3f3f_A            4 QPFDSGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSN------------------------------------   46 (351)
T ss_dssp             CCEECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCC------------------------------------
T ss_pred             cccCcccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCc------------------------------------
Confidence            34578999999999999998 89999999999999999864310                                    


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCC--CCCEEEEEeCCCcEEEEE
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPH--DDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~--~~~~l~s~~~dg~i~iwd  194 (490)
                                                            ......+.+|...|.+++|+|.  + .+|++|+.||.|++||
T Consensus        47 --------------------------------------~~~~~~~~~~~~~v~~~~~~~~~d~-~~l~s~~~dg~v~vwd   87 (351)
T 3f3f_A           47 --------------------------------------WELSDSWRAHDSSIVAIDWASPEYG-RIIASASYDKTVKLWE   87 (351)
T ss_dssp             --------------------------------------EEEEEEEECCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEE
T ss_pred             --------------------------------------ceecceeccCCCcEEEEEEcCCCCC-CEEEEEcCCCeEEEEe
Confidence                                                  0012245689999999999994  6 8999999999999999


Q ss_pred             CCCCCcccccc--cceeeecccccCEEEEEEeeC--CCCEEEEEeCCCcEEEEECCCCeeEEEEe-------------cC
Q psy17682        195 IPDGGISRTLT--EPVVDLLYHQRRVGLVLWHPT--AQNVLLTAGSDNNVAIWNVGTGEIMIQIE-------------CH  257 (490)
Q Consensus       195 ~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-------------~~  257 (490)
                      +.+++......  .+...+..|...|.+++|+|+  +. +|++++.||.|++||+++++.+..+.             .|
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (351)
T 3f3f_A           88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANH  166 (351)
T ss_dssp             ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred             cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhccccccccccccccccCCc
Confidence            98775322111  224456679999999999999  74 99999999999999998876443322             57


Q ss_pred             CCcEEEEEEcCC---CCEEEEEeCCCeEEEEeCCCCce--eeeeeecCCCceeEEEEeCCC----cEEEEEeCCCceeEE
Q psy17682        258 PDIVYSASWNWD---GSKLLTTCKDKKMRIINPRTGAI--EEEAVCHEGSKATRAIYLKSG----LIFTTGFSKMSERQY  328 (490)
Q Consensus       258 ~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~s~~~----~~l~~~~~~~~~~~i  328 (490)
                      ...+.+++|+|+   +..+++++.++.+.+|+...++.  ...+.+|... +.+++|+|++    .+|++|+   .|+.|
T Consensus       167 ~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-i~~~~~~p~~~~~~~~l~s~~---~dg~i  242 (351)
T 3f3f_A          167 LQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSL-IRSISWAPSIGRWYQLIATGC---KDGRI  242 (351)
T ss_dssp             SCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSC-EEEEEECCCSSCSSEEEEEEE---TTSCE
T ss_pred             ccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcc-eeEEEECCCCCCcceEEEEEc---CCCeE
Confidence            788999999997   89999999999999888887765  5556677665 9999999998    8999998   68999


Q ss_pred             EEecCCCCCCC--------------------------------------------eEEEeccCCCceeeeeecCCCCeEE
Q psy17682        329 SLRAPDHLDEP--------------------------------------------IVMVELDTSNGVMFPLYDPDTNLVY  364 (490)
Q Consensus       329 ~iwd~~~~~~~--------------------------------------------~~~~~~~~~~~i~~~~~s~~~~~l~  364 (490)
                      ++||++.....                                            .......|...|.+++|+|++++| 
T Consensus       243 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-  321 (351)
T 3f3f_A          243 RIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTIL-  321 (351)
T ss_dssp             EEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCE-
T ss_pred             EEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEE-
Confidence            99999864211                                            111122466789999999999998 


Q ss_pred             EEecCCCeEEEEEecCCCC
Q psy17682        365 LCGKGDSVIRYFEITAEPP  383 (490)
Q Consensus       365 ~~g~~dg~i~iwd~~~~~~  383 (490)
                      ++|+.||.|++|++.+++.
T Consensus       322 ~s~~~dg~v~iw~~~~~~~  340 (351)
T 3f3f_A          322 SSAGDDGKVRLWKATYSNE  340 (351)
T ss_dssp             EEEETTSCEEEEEECTTSC
T ss_pred             EEecCCCcEEEEecCcCcc
Confidence            7899999999999998863

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6e-34  Score=275.41  Aligned_cols=300  Identities=11%  Similarity=0.054  Sum_probs=222.7

Q ss_pred             cccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEec
Q psy17682         40 LLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITIS  119 (490)
Q Consensus        40 l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  119 (490)
                      -+.-...|.+++|+|+| .++||+|.|++|+  |.+.+.                 .+         .++...+..++|+
T Consensus        11 ~~~~~~~v~sv~~SpDG-~~iASas~D~TV~--d~~~~~-----------------~l---------~gh~~~v~~V~Fs   61 (588)
T 2j04_A           11 RKEFEDWKNNLTWARDG-TLYLTTFPDISIG--QPKYAK-----------------DI---------NCNSKNLFHVKEF   61 (588)
T ss_dssp             SCCCSSSSCCEEECTTS-CEEEECSSSEEEE--EECCCS-----------------CC---------SSBGGGTEEEEEE
T ss_pred             HhHhhccEEEEEECCCC-CEEEEEcCCceee--cccccc-----------------ee---------cCCCccEEEEEEC
Confidence            34456889999999999 9999999999999  644332                 00         1245578999999


Q ss_pred             cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682        120 EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG  199 (490)
Q Consensus       120 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~  199 (490)
                      |++            .++.+.+|...        .. ....+ +|...|.+++|+|+| .+||+++.||.|++||.+.  
T Consensus        62 Pdg------------~~~~~~~~~~~--------~~-~~~~~-~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~--  116 (588)
T 2j04_A           62 PLE------------FENKLDFELAQ--------QN-GLLNS-QPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK--  116 (588)
T ss_dssp             CCC------------CCCTTTTSCCC--------SS-CSSTT-SCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE--
T ss_pred             CCC------------CcceEEEEeCC--------Cc-eEeec-CCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc--
Confidence            984            23333333221        11 11111 568899999999998 8999999999999999533  


Q ss_pred             cccccccceeeeccccc-----CEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe-------eEEEE----ecCCCcEEE
Q psy17682        200 ISRTLTEPVVDLLYHQR-----RVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE-------IMIQI----ECHPDIVYS  263 (490)
Q Consensus       200 ~~~~~~~~~~~~~~~~~-----~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~-------~~~~~----~~~~~~v~~  263 (490)
                      ++.       .+. |..     .|.+++|+|+|+ +|++|+.||+|++||+.+++       .+.++    .+|...|.+
T Consensus       117 ~l~-------~l~-~~~~~~~~sv~svafSPDG~-~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~s  187 (588)
T 2j04_A          117 MLT-------NLD-SKGNLSSRTYHCFEWNPIES-SIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTH  187 (588)
T ss_dssp             EEE-------ECC-CSSCSTTTCEEEEEECSSSS-CEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEE
T ss_pred             eee-------ecc-CCCccccccEEEEEEcCCCC-EEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEE
Confidence            222       233 444     599999999996 99999999999999999875       35666    567789999


Q ss_pred             EEEcCCCCEEEEEeCCCeEEEEeCCCCce---eeeee-ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCC
Q psy17682        264 ASWNWDGSKLLTTCKDKKMRIINPRTGAI---EEEAV-CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEP  339 (490)
Q Consensus       264 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~-~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~  339 (490)
                      ++|+|+|  +++++.|++|++||+.+++.   ..++. +|.. .+.+++|+  |..+++++    ++.|++||+.+... 
T Consensus       188 VawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~-~V~svaFs--g~~LASa~----~~tIkLWd~~~~~~-  257 (588)
T 2j04_A          188 IVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRR-KITDLKIV--DYKVVLTC----PGYVHKIDLKNYSI-  257 (588)
T ss_dssp             EEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSS-CCCCEEEE--TTEEEEEC----SSEEEEEETTTTEE-
T ss_pred             EEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccC-cEEEEEEE--CCEEEEEe----CCeEEEEECCCCeE-
Confidence            9999999  88899999999999988774   24554 5554 49999999  68888886    68999999987542 


Q ss_pred             eEEEeccCCCceeeeee--cCCCCeEEEEecCCCeEEEEEecC-----CCCee--------------EEeeeeeCCCcee
Q psy17682        340 IVMVELDTSNGVMFPLY--DPDTNLVYLCGKGDSVIRYFEITA-----EPPFV--------------HYINTFQTPDPQR  398 (490)
Q Consensus       340 ~~~~~~~~~~~i~~~~~--s~~~~~l~~~g~~dg~i~iwd~~~-----~~~~~--------------~~~~~~~~~~~i~  398 (490)
                       .....+|...+..++|  +|++..+ ++++.||+ ++|....     ...+.              ..+..+.+...|.
T Consensus       258 -~~~~~gh~~~V~~va~~~s~d~~~L-a~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~  334 (588)
T 2j04_A          258 -SSLKTGSLENFHIIPLNHEKESTIL-LMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIH  334 (588)
T ss_dssp             -EEEECSCCSCCCEEEETTCSSCEEE-EECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEE
T ss_pred             -EEEEcCCCceEEEEEeeeCCCCCEE-EEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEE
Confidence             1333378888999999  9999888 78889999 9998631     11000              0111222233589


Q ss_pred             eEEEeeCceeEEeecce
Q psy17682        399 GIGMMPKRGCDVNSCEI  415 (490)
Q Consensus       399 ~~~~sp~~~~l~~~~~~  415 (490)
                      +++|||||.++|++.+.
T Consensus       335 ~va~SPdG~~lA~~~~i  351 (588)
T 2j04_A          335 GISLSPDGYSIAIVYDM  351 (588)
T ss_dssp             EEEECTTSSEEEEEEEE
T ss_pred             EEEECCCCCEEEEEEec
Confidence            99999999998887654

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=1.9e-33  Score=267.48  Aligned_cols=293  Identities=10%  Similarity=0.084  Sum_probs=226.6

Q ss_pred             ccccCCeeEeccccccceEEEEEeeCC---CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCC--CCEEEE
Q psy17682        109 RNSTANEITISEDYVKEFKEEIRKLKS---QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHD--DNVIAS  183 (490)
Q Consensus       109 ~~~~v~~~~~s~~~~~~~~~~~~~~~~---~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~--~~~l~s  183 (490)
                      +...|.+++|+|+.    ..++++++.   ++.+++|++.     .++.  ......+|...|.+++|+|++  +.+|++
T Consensus        17 h~~~v~~~~~~p~~----~~l~~~~s~~~~d~~v~iw~~~-----~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~l~~   85 (357)
T 3i2n_A           17 FNYTVFDCKWVPCS----AKFVTMGNFARGTGVIQLYEIQ-----HGDL--KLLREIEKAKPIKCGTFGATSLQQRYLAT   85 (357)
T ss_dssp             CSSCEEEEEECTTS----SEEEEEEC--CCCEEEEEEEEC-----SSSE--EEEEEEEESSCEEEEECTTCCTTTCCEEE
T ss_pred             CCCceEEEEEcCCC----ceEEEecCccCCCcEEEEEeCC-----CCcc--cceeeecccCcEEEEEEcCCCCCCceEEE
Confidence            34478999999985    234555655   9999999985     2221  112234899999999999983  389999


Q ss_pred             EeCCCcEEEEECCCCC-cccccccceeeecccccCEEEEEE------eeCCCCEEEEEeCCCcEEEEECCCCe-eEEEEe
Q psy17682        184 GSEDCVVKVWQIPDGG-ISRTLTEPVVDLLYHQRRVGLVLW------HPTAQNVLLTAGSDNNVAIWNVGTGE-IMIQIE  255 (490)
Q Consensus       184 ~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~------~p~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~  255 (490)
                      |+.||.|++||+.+++ ...       .+.+|...|.++.|      +|++. +|++++.|+.|++||+++++ .+..+.
T Consensus        86 ~~~dg~i~iwd~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~  157 (357)
T 3i2n_A           86 GDFGGNLHIWNLEAPEMPVY-------SVKGHKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVKVWDPRQKDDPVANME  157 (357)
T ss_dssp             EETTSCEEEECTTSCSSCSE-------EECCCSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEEEECTTSCSSCSEEEC
T ss_pred             ecCCCeEEEEeCCCCCccEE-------EEEecccceEEEeeccccccCCCcc-EEEEEeCCCeEEEEeCCCCCCcceecc
Confidence            9999999999998876 333       35569999999965      57774 99999999999999999887 777776


Q ss_pred             cCCC----cEEEEE----EcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeC---CCcEEEEEeCCCc
Q psy17682        256 CHPD----IVYSAS----WNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLK---SGLIFTTGFSKMS  324 (490)
Q Consensus       256 ~~~~----~v~~~~----~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~---~~~~l~~~~~~~~  324 (490)
                      .|.+    .+.+++    |+|++++|++++.||.|++||+++++.... ..|.. .+.+++|+|   ++.++++++   .
T Consensus       158 ~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~-~v~~~~~~~~~~~~~~l~~~~---~  232 (357)
T 3i2n_A          158 PVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKN-GVCSLEFDRKDISMNKLVATS---L  232 (357)
T ss_dssp             CCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSS-CEEEEEESCSSSSCCEEEEEE---S
T ss_pred             ccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCC-ceEEEEcCCCCCCCCEEEEEC---C
Confidence            5554    799998    788999999999999999999999887544 44555 499999999   899999998   6


Q ss_pred             eeEEEEecCCCCCCCeEEE---eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCee---------------E
Q psy17682        325 ERQYSLRAPDHLDEPIVMV---ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFV---------------H  386 (490)
Q Consensus       325 ~~~i~iwd~~~~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~---------------~  386 (490)
                      ++.|++||+++........   ...|...|.+++|+|+++.++++|+.||.|++||+..+....               .
T Consensus       233 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~  312 (357)
T 3i2n_A          233 EGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVS  312 (357)
T ss_dssp             TTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEE
T ss_pred             CCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccc
Confidence            8999999998765443332   125778899999999999555899999999999999764321               2


Q ss_pred             Eeeee-eCCCceeeEEEeeCceeEE-ee--cceeEEEEecCCC
Q psy17682        387 YINTF-QTPDPQRGIGMMPKRGCDV-NS--CEIGRFFRLNNSG  425 (490)
Q Consensus       387 ~~~~~-~~~~~i~~~~~sp~~~~l~-~~--~~~~~~~~~~~~~  425 (490)
                      .+..+ .+..+|++++|+|++.+++ ++  ++.+++|++.+..
T Consensus       313 ~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~  355 (357)
T 3i2n_A          313 LLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN  355 (357)
T ss_dssp             EEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred             eeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence            23333 3557899999999998887 45  4588999998754

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.2e-33  Score=271.70  Aligned_cols=268  Identities=16%  Similarity=0.200  Sum_probs=216.2

Q ss_pred             eeeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccC
Q psy17682         24 RLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGG  103 (490)
Q Consensus        24 ~~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (490)
                      .+..|+..+.........+|...|++++|+|++ .+|++|+.||.|++||+.++.                         
T Consensus       114 ~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~-~~l~~~~~dg~i~iwd~~~~~-------------------------  167 (401)
T 4aez_A          114 NVYVWNADSGSVSALAETDESTYVASVKWSHDG-SFLSVGLGNGLVDIYDVESQT-------------------------  167 (401)
T ss_dssp             EEEEEETTTCCEEEEEECCTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTCC-------------------------
T ss_pred             eEEEeeCCCCcEeEeeecCCCCCEEEEEECCCC-CEEEEECCCCeEEEEECcCCe-------------------------
Confidence            366677665554444445599999999999988 899999999999999987643                         


Q ss_pred             CCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEE
Q psy17682        104 KGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIAS  183 (490)
Q Consensus       104 ~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s  183 (490)
                                                                           ....+.+|...|.+++|+  + .++++
T Consensus       168 -----------------------------------------------------~~~~~~~~~~~v~~~~~~--~-~~l~~  191 (401)
T 4aez_A          168 -----------------------------------------------------KLRTMAGHQARVGCLSWN--R-HVLSS  191 (401)
T ss_dssp             -----------------------------------------------------EEEEECCCSSCEEEEEEE--T-TEEEE
T ss_pred             -----------------------------------------------------EEEEecCCCCceEEEEEC--C-CEEEE
Confidence                                                                 011345789999999995  3 79999


Q ss_pred             EeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEE
Q psy17682        184 GSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYS  263 (490)
Q Consensus       184 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~  263 (490)
                      |+.||.|++||++....      ....+.+|...|.+++|+|++. +|++|+.|+.|++||+++++.+..+..|...|.+
T Consensus       192 ~~~dg~i~i~d~~~~~~------~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~  264 (401)
T 4aez_A          192 GSRSGAIHHHDVRIANH------QIGTLQGHSSEVCGLAWRSDGL-QLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKA  264 (401)
T ss_dssp             EETTSEEEEEETTSSSC------EEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTCSSEEEEECCCSSCCCE
T ss_pred             EcCCCCEEEEecccCcc------eeeEEcCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEccCCCCCccEEecCCcceEEE
Confidence            99999999999984432      2233567999999999999985 9999999999999999999999999999999999


Q ss_pred             EEEcCCCC-EEEEEe--CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe
Q psy17682        264 ASWNWDGS-KLLTTC--KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI  340 (490)
Q Consensus       264 ~~~~~~~~-~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~  340 (490)
                      ++|+|++. ++++++  .|+.|++||+++++.+..+..+ . .+.+++|+|++.++++++.. .++.|++||+.+.....
T Consensus       265 ~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~-~-~v~~~~~s~~~~~l~~~~g~-~dg~i~v~~~~~~~~~~  341 (401)
T 4aez_A          265 VAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG-S-QVTSLIWSPHSKEIMSTHGF-PDNNLSIWSYSSSGLTK  341 (401)
T ss_dssp             EEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS-S-CEEEEEECSSSSEEEEEECT-TTCEEEEEEEETTEEEE
T ss_pred             EEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC-C-cEEEEEECCCCCeEEEEeec-CCCcEEEEecCCcccee
Confidence            99999775 555554  6999999999999988888643 3 49999999999999884210 58999999998754433


Q ss_pred             EEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682        341 VMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF  384 (490)
Q Consensus       341 ~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~  384 (490)
                      ......|...|.+++|+|++++| ++++.||.|++|++.+++..
T Consensus       342 ~~~~~~h~~~v~~~~~s~dg~~l-~s~~~dg~i~iw~~~~~~~~  384 (401)
T 4aez_A          342 QVDIPAHDTRVLYSALSPDGRIL-STAASDENLKFWRVYDGDHV  384 (401)
T ss_dssp             EEEEECCSSCCCEEEECTTSSEE-EEECTTSEEEEEECCC----
T ss_pred             EEEecCCCCCEEEEEECCCCCEE-EEEeCCCcEEEEECCCCccc
Confidence            33334677889999999999998 78999999999999998744

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=1.3e-32  Score=267.96  Aligned_cols=245  Identities=16%  Similarity=0.242  Sum_probs=199.7

Q ss_pred             ecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEE
Q psy17682        162 GGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVA  241 (490)
Q Consensus       162 ~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~  241 (490)
                      .+|...|++|+|+|+| .+|++|+.||+|++||+++++.+..       +.+|...+.++.|+  + .+|++|+.|+.++
T Consensus       144 ~~~~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~~~~~~~-------~~~h~~~v~~~s~~--~-~~l~sgs~d~~i~  212 (420)
T 4gga_A          144 EQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRLRN-------MTSHSARVGSLSWN--S-YILSSGSRSGHIH  212 (420)
T ss_dssp             CSTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEE-------ECCCSSCEEEEEEE--T-TEEEEEETTSEEE
T ss_pred             cCCCCcEEEEEECCCC-CEEEEEECCCeEEEEEcCCCcEEEE-------EeCCCCceEEEeeC--C-CEEEEEeCCCcee
Confidence            4788899999999998 8999999999999999998876554       45699999998886  3 4899999999999


Q ss_pred             EEECCCC-eeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce----eeeeeecCCCceeEEEEeCCC-cE
Q psy17682        242 IWNVGTG-EIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI----EEEAVCHEGSKATRAIYLKSG-LI  315 (490)
Q Consensus       242 iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~s~~~-~~  315 (490)
                      +||.... ..+..+.+|...+..+.|+|+++++++++.|+.+++||..+++.    +.....|... +..++|+|.+ .+
T Consensus       213 ~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~-V~~~~~~p~~~~~  291 (420)
T 4gga_A          213 HHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGA-VKAVAWCPWQSNV  291 (420)
T ss_dssp             EEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSC-EEEEEECTTCTTE
T ss_pred             EeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCc-eeeeeeCCCcccE
Confidence            9998864 46677889999999999999999999999999999999987753    3445556654 9999999974 45


Q ss_pred             EEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEE-ecCCCeEEEEEecCCCCeeEEeeeeeCC
Q psy17682        316 FTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLC-GKGDSVIRYFEITAEPPFVHYINTFQTP  394 (490)
Q Consensus       316 l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-g~~dg~i~iwd~~~~~~~~~~~~~~~~~  394 (490)
                      +++++. ..|+.|++||+.++..   .........+.++.|+|+++.++++ |+.|+.|+|||+.+++++ ..+.  .|.
T Consensus       292 la~~~g-s~D~~I~iwd~~t~~~---~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v-~~l~--gH~  364 (420)
T 4gga_A          292 LATGGG-TSDRHIRIWNVCSGAC---LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV-AELK--GHT  364 (420)
T ss_dssp             EEEEEC-TTTCEEEEEETTTTEE---EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE-EEEC--CCS
T ss_pred             EEEEee-cCCCEEEEEeCCcccc---ceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEE-EEEc--CCC
Confidence            555432 1589999999998753   3334456789999999999998554 347999999999998733 2222  356


Q ss_pred             CceeeEEEeeCceeEEee--cceeEEEEecCCC
Q psy17682        395 DPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSG  425 (490)
Q Consensus       395 ~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~  425 (490)
                      ..|++++|+|+|.+++++  ++.+++|++....
T Consensus       365 ~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~  397 (420)
T 4gga_A          365 SRVLSLTMSPDGATVASAAADETLRLWRCFELD  397 (420)
T ss_dssp             SCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred             CCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence            789999999999999887  4589999987654

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=8.6e-34  Score=268.32  Aligned_cols=276  Identities=9%  Similarity=0.030  Sum_probs=222.0

Q ss_pred             ecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEe
Q psy17682         39 DLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITI  118 (490)
Q Consensus        39 ~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  118 (490)
                      ...+|.+.|++++|+|++ .+|++++.|+.|++|++..+...                 .                    
T Consensus         6 ~~~~h~~~v~~~~~s~~~-~~l~~~~~d~~v~iw~~~~~~~~-----------------~--------------------   47 (342)
T 1yfq_A            6 IEQAPKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDIQAKN-----------------V--------------------   47 (342)
T ss_dssp             CSSCCSSCEEEEEEEGGG-TEEEEEETTSEEEEEEEETTTTE-----------------E--------------------
T ss_pred             cccCCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEeCCCCcc-----------------c--------------------
Confidence            456899999999999998 89999999999999998764300                 0                    


Q ss_pred             ccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCC-EEEEEeCCCcEEEEEC-C
Q psy17682        119 SEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDN-VIASGSEDCVVKVWQI-P  196 (490)
Q Consensus       119 s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~-~l~s~~~dg~i~iwd~-~  196 (490)
                                                            ....+.+|...|.+++|+|++ . +|++|+.||.|++||+ .
T Consensus        48 --------------------------------------~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~~wd~~~   88 (342)
T 1yfq_A           48 --------------------------------------DLLQSLRYKHPLLCCNFIDNT-DLQIYVGTVQGEILKVDLIG   88 (342)
T ss_dssp             --------------------------------------EEEEEEECSSCEEEEEEEESS-SEEEEEEETTSCEEEECSSS
T ss_pred             --------------------------------------cceeeeecCCceEEEEECCCC-CcEEEEEcCCCeEEEEEecc
Confidence                                                  011234789999999999987 8 9999999999999999 7


Q ss_pred             CCCcccccccceeeecc--cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC---------CeeEEEEecCCCcEEEEE
Q psy17682        197 DGGISRTLTEPVVDLLY--HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT---------GEIMIQIECHPDIVYSAS  265 (490)
Q Consensus       197 ~~~~~~~~~~~~~~~~~--~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~---------~~~~~~~~~~~~~v~~~~  265 (490)
                      +++.        ..+.+  |...|.+++|+| + .+|++++.|+.|++||+++         ++++..+. |...|.+++
T Consensus        89 ~~~~--------~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~  157 (342)
T 1yfq_A           89 SPSF--------QALTNNEANLGICRICKYG-D-DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMD  157 (342)
T ss_dssp             SSSE--------EECBSCCCCSCEEEEEEET-T-TEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEE
T ss_pred             CCce--------EeccccCCCCceEEEEeCC-C-CEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEE
Confidence            7643        23556  999999999999 6 4999999999999999987         76666666 889999999


Q ss_pred             EcCCCCEEEEEeCCCeEEEEeCCC-Ccee-e-eeeecCCCceeEEEEeC-CCcEEEEEeCCCceeEEEEecCCCC-----
Q psy17682        266 WNWDGSKLLTTCKDKKMRIINPRT-GAIE-E-EAVCHEGSKATRAIYLK-SGLIFTTGFSKMSERQYSLRAPDHL-----  336 (490)
Q Consensus       266 ~~~~~~~l~~~~~dg~i~iwd~~~-~~~~-~-~~~~~~~~~~~~~~~s~-~~~~l~~~~~~~~~~~i~iwd~~~~-----  336 (490)
                      |+|++  +++++.|+.|++||+++ +... . ....+.. .+.+++|+| ++.++++++   .++.+++|+++..     
T Consensus       158 ~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~-~i~~i~~~~~~~~~l~~~~---~dg~i~i~~~~~~~~~~~  231 (342)
T 1yfq_A          158 TNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKY-QIRDVALLPKEQEGYACSS---IDGRVAVEFFDDQGDDYN  231 (342)
T ss_dssp             ECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSS-CEEEEEECSGGGCEEEEEE---TTSEEEEEECCTTCCSTT
T ss_pred             ecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCC-ceeEEEECCCCCCEEEEEe---cCCcEEEEEEcCCCcccc
Confidence            99887  99999999999999998 5432 2 2223444 499999999 999999998   6899999999876     


Q ss_pred             -CCCeEEEecc-------CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-C-CCceeeEEEeeCc
Q psy17682        337 -DEPIVMVELD-------TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-T-PDPQRGIGMMPKR  406 (490)
Q Consensus       337 -~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~-~~~i~~~~~sp~~  406 (490)
                       .....+....       +...|.+++|+|++++| ++|+.||.|++||+.+++.    +..+. + ..+|.+++  |++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~vwd~~~~~~----~~~~~~~h~~~v~~~~--~~~  304 (342)
T 1yfq_A          232 SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFL-YTAGSDGIISCWNLQTRKK----IKNFAKFNEDSVVKIA--CSD  304 (342)
T ss_dssp             CTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCE-EEEETTSCEEEEETTTTEE----EEECCCCSSSEEEEEE--ECS
T ss_pred             cccceeeecccccccccccceeEEEEEEcCCCCEE-EEecCCceEEEEcCccHhH----hhhhhcccCCCceEec--CCC
Confidence             3333332211       13389999999999998 7899999999999998863    22233 3 57899999  999


Q ss_pred             eeEEeecce
Q psy17682        407 GCDVNSCEI  415 (490)
Q Consensus       407 ~~l~~~~~~  415 (490)
                      .++++++.+
T Consensus       305 ~~l~s~s~D  313 (342)
T 1yfq_A          305 NILCLATSD  313 (342)
T ss_dssp             SEEEEEEEC
T ss_pred             CeEEEEecC
Confidence            998888654

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=1.2e-32  Score=268.17  Aligned_cols=292  Identities=12%  Similarity=0.115  Sum_probs=228.1

Q ss_pred             cccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEec
Q psy17682         40 LLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITIS  119 (490)
Q Consensus        40 l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  119 (490)
                      +.+| ..+....|+|++ .+|++|+.||.|++||+.++..                  .....     .+...+.+++|+
T Consensus        94 ~~~~-~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~------------------~~~~~-----~h~~~v~~~~~~  148 (420)
T 3vl1_A           94 LKRA-DYTAVDTAKLQM-RRFILGTTEGDIKVLDSNFNLQ------------------REIDQ-----AHVSEITKLKFF  148 (420)
T ss_dssp             SCSC-CEEEEEEECSSS-CEEEEEETTSCEEEECTTSCEE------------------EEETT-----SSSSCEEEEEEC
T ss_pred             EecC-CceEEEEEecCC-CEEEEEECCCCEEEEeCCCcce------------------eeecc-----cccCccEEEEEC
Confidence            4455 555666788888 8999999999999999886531                  11111     133468999999


Q ss_pred             cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682        120 EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG  199 (490)
Q Consensus       120 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~  199 (490)
                      |+.     ..+++++.++.+++|++.     .   ......+.+|.+.|.+++|+|++ .+|++++.||+|++||+++++
T Consensus       149 ~~~-----~~l~s~s~d~~i~iwd~~-----~---~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~  214 (420)
T 3vl1_A          149 PSG-----EALISSSQDMQLKIWSVK-----D---GSNPRTLIGHRATVTDIAIIDRG-RNVLSASLDGTIRLWECGTGT  214 (420)
T ss_dssp             TTS-----SEEEEEETTSEEEEEETT-----T---CCCCEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTTE
T ss_pred             CCC-----CEEEEEeCCCeEEEEeCC-----C---CcCceEEcCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEeECCCCc
Confidence            985     367788999999999985     2   22456778999999999999988 899999999999999999887


Q ss_pred             cccccccceeeecccccCEEE---------------------EEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-cC
Q psy17682        200 ISRTLTEPVVDLLYHQRRVGL---------------------VLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CH  257 (490)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~v~~---------------------~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~  257 (490)
                      ....+..    ...|...+.+                     ++|+|++. +|++|+.||.|++||+++++.+..+. .|
T Consensus       215 ~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~  289 (420)
T 3vl1_A          215 TIHTFNR----KENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK-YVIAGHVSGVITVHNVFSKEQTIQLPSKF  289 (420)
T ss_dssp             EEEEECB----TTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE-EEEEEETTSCEEEEETTTCCEEEEECCTT
T ss_pred             eeEEeec----CCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC-EEEEEcCCCeEEEEECCCCceeEEccccc
Confidence            7665542    1123444444                     45567774 89999999999999999998777765 57


Q ss_pred             CCcEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCce-eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCC
Q psy17682        258 PDIVYSASWNWDGS-KLLTTCKDKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDH  335 (490)
Q Consensus       258 ~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~  335 (490)
                      ...|.+++|+|+++ +|++++.||.|++||+++++. +..+..|....+.++.+ +++.+|++++   .|+.|++|++..
T Consensus       290 ~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~---~d~~v~iw~~~~  365 (420)
T 3vl1_A          290 TCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSG---FDTSIKLDIISD  365 (420)
T ss_dssp             SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEET---TTEEEEEEEECC
T ss_pred             CCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEec---CCccEEEEeccC
Confidence            88999999999998 999999999999999998754 77777766666777755 5788999988   799999999987


Q ss_pred             CCCCeEE-------EeccCCCceeeeeecCCCC---eEEEEecCCCeEEEEEecC
Q psy17682        336 LDEPIVM-------VELDTSNGVMFPLYDPDTN---LVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       336 ~~~~~~~-------~~~~~~~~i~~~~~s~~~~---~l~~~g~~dg~i~iwd~~~  380 (490)
                      ...+...       ....+...+..++|+|+++   .++++ +.+|.+.+|++.+
T Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~-g~~g~~~~~~~~~  419 (420)
T 3vl1_A          366 PESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEV-GKNNFCALYNLSN  419 (420)
T ss_dssp             TTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEE-ETTTEEEEEESCC
T ss_pred             CCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEE-cCCceEEEEeccC
Confidence            5433222       2235567799999999999   67454 5689999999865

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=2.8e-34  Score=268.61  Aligned_cols=252  Identities=16%  Similarity=0.141  Sum_probs=195.7

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC--CCCEEEEEeCC
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT--AQNVLLTAGSD  237 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~d  237 (490)
                      .+.+|.+.|++++|+|+| ++|++|+.|++|++||+.+++..     ....+.+|...|.+++|+|.  + ++|++|+.|
T Consensus         8 ~~~~H~~~V~~v~~s~~g-~~lasgs~D~~v~lwd~~~~~~~-----~~~~l~gH~~~V~~v~~~~~~~~-~~l~s~s~D   80 (316)
T 3bg1_A            8 VDTSHEDMIHDAQMDYYG-TRLATCSSDRSVKIFDVRNGGQI-----LIADLRGHEGPVWQVAWAHPMYG-NILASCSYD   80 (316)
T ss_dssp             ------CCEEEEEECGGG-CEEEEEETTTEEEEEEEETTEEE-----EEEEEECCSSCEEEEEECCGGGS-SCEEEEETT
T ss_pred             ecccccCeEEEeeEcCCC-CEEEEEeCCCeEEEEEecCCCcE-----EEEEEcCCCccEEEEEeCCCCCC-CEEEEEECC
Confidence            457999999999999998 89999999999999999766421     22346789999999999863  5 489999999


Q ss_pred             CcEEEEECCCCe--eEEEEecCCCcEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCce---eeeeeecCCCceeEEEEe
Q psy17682        238 NNVAIWNVGTGE--IMIQIECHPDIVYSASWNWD--GSKLLTTCKDKKMRIINPRTGAI---EEEAVCHEGSKATRAIYL  310 (490)
Q Consensus       238 g~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~s  310 (490)
                      ++|++||+++++  .+..+.+|...|.+++|+|+  +.+|++++.|++|++||++.+..   ...+..|... +.++.|+
T Consensus        81 ~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~-v~~~~~~  159 (316)
T 3bg1_A           81 RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIG-CNAVSWA  159 (316)
T ss_dssp             SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSC-BCCCEEC
T ss_pred             CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCC-cceEEEc
Confidence            999999998873  56677889999999999997  78999999999999999987632   2334466654 8889999


Q ss_pred             CC-----------------CcEEEEEeCCCceeEEEEecCCCCCCCeEEE-eccCCCceeeeeecCCC----CeEEEEec
Q psy17682        311 KS-----------------GLIFTTGFSKMSERQYSLRAPDHLDEPIVMV-ELDTSNGVMFPLYDPDT----NLVYLCGK  368 (490)
Q Consensus       311 ~~-----------------~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~-~~~~~~~i~~~~~s~~~----~~l~~~g~  368 (490)
                      |+                 +.+|++|+   .|+.|++||++......... ...|...|.+++|+|++    ++| ++|+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~l~sgs---~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~l-as~s  235 (316)
T 3bg1_A          160 PAVVPGSLIDHPSGQKPNYIKRFASGG---CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTI-ASCS  235 (316)
T ss_dssp             CCCCC------CCSCCCCCCCBEECCB---TTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEE-EEEE
T ss_pred             cccCCccccccccccCccccceEEEec---CCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceE-EEEc
Confidence            87                 46888888   68999999997543222222 23577789999999987    566 8999


Q ss_pred             CCCeEEEEEecCCC---CeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCC
Q psy17682        369 GDSVIRYFEITAEP---PFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSG  425 (490)
Q Consensus       369 ~dg~i~iwd~~~~~---~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~  425 (490)
                      .|++|++|++.+..   .....+.  .+...|.+++|+|++.+++++  ++.+++|+.....
T Consensus       236 ~D~~v~iw~~~~~~~~~~~~~~~~--~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g  295 (316)
T 3bg1_A          236 QDGRVFIWTCDDASSNTWSPKLLH--KFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDG  295 (316)
T ss_dssp             TTCEEEEEECSSTTCCCCBCCEEE--ECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTS
T ss_pred             CCCeEEEEEccCccccchhhhhhh--cCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCC
Confidence            99999999998732   1111222  345689999999999988876  4588999987443

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=7.7e-33  Score=270.93  Aligned_cols=305  Identities=13%  Similarity=0.163  Sum_probs=229.0

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      ...+....+|...|.++.|  ++ .+|++|+.||+|++||+.+++..                  ..+.     .+...+
T Consensus       123 ~~~~~~~~~~~~~v~~~~~--d~-~~l~~g~~dg~i~iwd~~~~~~~------------------~~~~-----~h~~~v  176 (435)
T 1p22_A          123 LQRIHCRSETSKGVYCLQY--DD-QKIVSGLRDNTIKIWDKNTLECK------------------RILT-----GHTGSV  176 (435)
T ss_dssp             CCCEECCCSSCCCEEEEEC--CS-SEEEEEESSSCEEEEESSSCCEE------------------EEEC-----CCSSCE
T ss_pred             ceEEecccCCCCcEEEEEE--CC-CEEEEEeCCCeEEEEeCCCCeEE------------------EEEc-----CCCCcE
Confidence            3445566778889999988  45 88999999999999999876511                  1111     123356


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                      .++++...       .+++++.+|.|++|++.     .+   .....+.+|.+.|.+++|++   .++++|+.||.|++|
T Consensus       177 ~~l~~~~~-------~l~sg~~dg~i~vwd~~-----~~---~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vw  238 (435)
T 1p22_A          177 LCLQYDER-------VIITGSSDSTVRVWDVN-----TG---EMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVW  238 (435)
T ss_dssp             EEEECCSS-------EEEEEETTSCEEEEESS-----SC---CEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEE
T ss_pred             EEEEECCC-------EEEEEcCCCeEEEEECC-----CC---cEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEE
Confidence            77777433       68889999999999985     22   34567789999999999974   589999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  273 (490)
                      |+.+++....    ...+.+|...|.+++|  ++ .++++|+.||.|++||+++++.+..+.+|...|.+++++  ++++
T Consensus       239 d~~~~~~~~~----~~~~~~~~~~v~~~~~--~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l  309 (435)
T 1p22_A          239 DMASPTDITL----RRVLVGHRAAVNVVDF--DD-KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLV  309 (435)
T ss_dssp             ECSSSSCCEE----EEEECCCSSCEEEEEE--ET-TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEE
T ss_pred             eCCCCCCcee----eeEecCCCCcEEEEEe--CC-CEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEE
Confidence            9988765421    1235679999999999  45 489999999999999999999999999999999999994  7899


Q ss_pred             EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCC-------eEEEecc
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEP-------IVMVELD  346 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~-------~~~~~~~  346 (490)
                      ++|+.||.|++||+++++++..+.+|... +.++.|  ++.++++|+   .|+.|++||+.....+       .......
T Consensus       310 ~~g~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~~~~--~~~~l~sg~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~  383 (435)
T 1p22_A          310 VSGSSDNTIRLWDIECGACLRVLEGHEEL-VRCIRF--DNKRIVSGA---YDGKIKVWDLVAALDPRAPAGTLCLRTLVE  383 (435)
T ss_dssp             EEEETTSCEEEEETTTCCEEEEECCCSSC-EEEEEC--CSSEEEEEE---TTSCEEEEEHHHHTSTTSCTTTTEEEEECC
T ss_pred             EEEeCCCeEEEEECCCCCEEEEEeCCcCc-EEEEEe--cCCEEEEEe---CCCcEEEEECCCCCCccccccchheeeccC
Confidence            99999999999999999999999888775 888888  788999998   6899999998754421       2233346


Q ss_pred             CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee
Q psy17682        347 TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP  404 (490)
Q Consensus       347 ~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp  404 (490)
                      |...|.+++|  ++++| ++|+.||.|++||+.+....    .......+...+.|.+
T Consensus       384 h~~~v~~l~~--~~~~l-~s~s~Dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~  434 (435)
T 1p22_A          384 HSGRVFRLQF--DEFQI-VSSSHDDTILIWDFLNDPAA----QAEPPRSPSRTYTYIS  434 (435)
T ss_dssp             CSSCCCCEEE--CSSCE-EECCSSSEEEEEC---------------------------
T ss_pred             CCCCeEEEEe--CCCEE-EEEeCCCEEEEEECCCCCCc----ccCCCCCCccceeeec
Confidence            7778999999  67777 78999999999999887522    1122223555555543

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=6.4e-33  Score=264.74  Aligned_cols=286  Identities=13%  Similarity=0.191  Sum_probs=223.3

Q ss_pred             CCCCCcEEecccccceeeeEEeccCC--CceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCc
Q psy17682         31 RTLTEPVVDLLYHQRRVGLVLWHPTA--QNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGAN  108 (490)
Q Consensus        31 ~~~~~~~~~l~gH~~~V~~v~~~p~~--~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (490)
                      ....+++..+.+|.+.|++++|+|++  ..+|++|+.||.|++||+.+...                 .           
T Consensus        26 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~-----------------~-----------   77 (368)
T 3mmy_A           26 HNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ-----------------T-----------   77 (368)
T ss_dssp             SCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC-----------------E-----------
T ss_pred             CCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc-----------------e-----------
Confidence            44556788899999999999999994  48999999999999999976220                 0           


Q ss_pred             ccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC
Q psy17682        109 RNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC  188 (490)
Q Consensus       109 ~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg  188 (490)
                                                                      ....+.+|.+.|.+++|+|++ .+|++++.||
T Consensus        78 ------------------------------------------------~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg  108 (368)
T 3mmy_A           78 ------------------------------------------------IPKAQQMHTGPVLDVCWSDDG-SKVFTASCDK  108 (368)
T ss_dssp             ------------------------------------------------EEEEEEECSSCEEEEEECTTS-SEEEEEETTS
T ss_pred             ------------------------------------------------eEEEeccccCCEEEEEECcCC-CEEEEEcCCC
Confidence                                                            011356799999999999988 8999999999


Q ss_pred             cEEEEECCCCCcccccccceeeecccccCEEEEEE--eeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEE
Q psy17682        189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLW--HPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASW  266 (490)
Q Consensus       189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~  266 (490)
                      .|++||+.+++...        ...|...|.+++|  +|++. +|++++.|+.|++||+++++.+..+..+ ..+.++.+
T Consensus       109 ~v~iwd~~~~~~~~--------~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~  178 (368)
T 3mmy_A          109 TAKMWDLSSNQAIQ--------IAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSSNPMMVLQLP-ERCYCADV  178 (368)
T ss_dssp             EEEEEETTTTEEEE--------EEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCSSCSEEEECS-SCEEEEEE
T ss_pred             cEEEEEcCCCCcee--------eccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCCcEEEEEecC-CCceEEEe
Confidence            99999998876543        3349999999999  78874 8999999999999999999999988855 46777777


Q ss_pred             cCCCCEEEEEeCCCeEEEEeCCCCceeeeee-ecCCCceeEEEEeCCCcE----EEEEeCCCceeEEEEecCCCCCC---
Q psy17682        267 NWDGSKLLTTCKDKKMRIINPRTGAIEEEAV-CHEGSKATRAIYLKSGLI----FTTGFSKMSERQYSLRAPDHLDE---  338 (490)
Q Consensus       267 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~----l~~~~~~~~~~~i~iwd~~~~~~---  338 (490)
                      .  +..+++++.++.+++||++......... ........++.+.+++..    +++++   .++.+++||++....   
T Consensus       179 ~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~dg~i~i~~~~~~~~~~~  253 (368)
T 3mmy_A          179 I--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS---IEGRVAIHYINPPNPAKD  253 (368)
T ss_dssp             E--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE---TTSEEEEEESSCSCHHHH
T ss_pred             c--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEec---CCCcEEEEecCCCCcccc
Confidence            6  4588899999999999998765433322 222223666666655443    78887   689999999987632   


Q ss_pred             CeEEEeccCCC------------ceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCc
Q psy17682        339 PIVMVELDTSN------------GVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKR  406 (490)
Q Consensus       339 ~~~~~~~~~~~------------~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~  406 (490)
                      ...+.  .+..            .|.+++|+|++++| ++|+.||.|++||+.+++.+ ..+.  .+..+|++++|+|++
T Consensus       254 ~~~~~--~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~s~~~dg~i~iwd~~~~~~~-~~~~--~~~~~v~~~~~s~~g  327 (368)
T 3mmy_A          254 NFTFK--CHRSNGTNTSAPQDIYAVNGIAFHPVHGTL-ATVGSDGRFSFWDKDARTKL-KTSE--QLDQPISACCFNHNG  327 (368)
T ss_dssp             SEEEE--CSEEC----CCCEEECCEEEEEECTTTCCE-EEEETTSCEEEEETTTTEEE-EECC--CCSSCEEEEEECTTS
T ss_pred             ceeee--eeecccccccccccccceEEEEEecCCCEE-EEEccCCeEEEEECCCCcEE-EEec--CCCCCceEEEECCCC
Confidence            11221  2222            69999999999998 78999999999999988632 2222  345789999999999


Q ss_pred             eeEEeecc
Q psy17682        407 GCDVNSCE  414 (490)
Q Consensus       407 ~~l~~~~~  414 (490)
                      .+++++++
T Consensus       328 ~~l~~~s~  335 (368)
T 3mmy_A          328 NIFAYASS  335 (368)
T ss_dssp             SCEEEEEC
T ss_pred             CeEEEEec
Confidence            99888854

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=3.8e-33  Score=270.22  Aligned_cols=302  Identities=14%  Similarity=0.133  Sum_probs=232.9

Q ss_pred             ceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecc-ccc
Q psy17682         45 RRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISE-DYV  123 (490)
Q Consensus        45 ~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~  123 (490)
                      .....++++|+...++++++.||.|+||++.......              .....     -..+...|.+++|+| +. 
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~--------------~~~~~-----~~~h~~~V~~~~~~p~~~-   94 (402)
T 2aq5_A           35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVD--------------KNVPL-----VCGHTAPVLDIAWCPHND-   94 (402)
T ss_dssp             CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECC--------------TTCCC-----BCCCSSCEEEEEECTTCT-
T ss_pred             cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCC--------------CCCce-----EecCCCCEEEEEeCCCCC-
Confidence            3456799999886677788999999999986532000              00000     112344789999999 53 


Q ss_pred             cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc
Q psy17682        124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT  203 (490)
Q Consensus       124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~  203 (490)
                          ..+++++.+|.|++|++..... ..........+.+|...|.+++|+|++.++|++++.||.|++||+.+++....
T Consensus        95 ----~~l~s~s~dg~v~vw~~~~~~~-~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~  169 (402)
T 2aq5_A           95 ----NVIASGSEDCTVMVWEIPDGGL-VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLT  169 (402)
T ss_dssp             ----TEEEEEETTSEEEEEECCTTCC-SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred             ----CEEEEEeCCCeEEEEEccCCCC-ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEE
Confidence                3677889999999999862211 01112456778899999999999999867999999999999999998866554


Q ss_pred             cccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE-ecCCCc-EEEEEEcCCCCEEEEE---eC
Q psy17682        204 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI-ECHPDI-VYSASWNWDGSKLLTT---CK  278 (490)
Q Consensus       204 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~---~~  278 (490)
                      +.     ..+|...|.+++|+|++. +|++++.|+.|++||+++++.+..+ ..|.+. +.+++|+|++++|+++   +.
T Consensus       170 ~~-----~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~  243 (402)
T 2aq5_A          170 LG-----PDVHPDTIYSVDWSRDGA-LICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMS  243 (402)
T ss_dssp             EC-----TTTCCSCEEEEEECTTSS-CEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTC
T ss_pred             Ee-----cCCCCCceEEEEECCCCC-EEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCC
Confidence            31     045999999999999985 8999999999999999999999888 677765 8999999999999999   78


Q ss_pred             CCeEEEEeCCCCce-eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC-CeEEEeccCCCceeeeee
Q psy17682        279 DKKMRIINPRTGAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE-PIVMVELDTSNGVMFPLY  356 (490)
Q Consensus       279 dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~-~~~~~~~~~~~~i~~~~~  356 (490)
                      |+.|++||+++++. ...........+..++|+|++.++++++.  .|+.|++||+.+.+. ...+....+...+.+++|
T Consensus       244 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~--~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~  321 (402)
T 2aq5_A          244 ERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGK--GDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGY  321 (402)
T ss_dssp             CEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEET--TCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEE
T ss_pred             CceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEc--CCCeEEEEEecCCCcceEeecccccCCcccceEE
Confidence            99999999998764 33333222334899999999998864431  589999999998764 334444456678999999


Q ss_pred             cCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        357 DPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       357 s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      +|++.++ ++  .++.+++|++.+++
T Consensus       322 sp~~~~~-~s--~~~~~~~~~l~~~~  344 (402)
T 2aq5_A          322 MPKRGLE-VN--KCEIARFYKLHERK  344 (402)
T ss_dssp             CCGGGSC-GG--GTEEEEEEEEETTE
T ss_pred             ecccccc-ee--cceeEEEEEcCCCc
Confidence            9999887 43  46799999999864

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=3.5e-32  Score=257.38  Aligned_cols=264  Identities=14%  Similarity=0.139  Sum_probs=210.9

Q ss_pred             ceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEee--CCCCEEEEEeC
Q psy17682        159 ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP--TAQNVLLTAGS  236 (490)
Q Consensus       159 ~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~~l~s~~~  236 (490)
                      ..+.+|.+.|++++|+|++ .+|++|+.||.|++||+.++.....   ....+.+|...|.+++|+|  ++ .+|++++.
T Consensus         5 ~~~~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~d~-~~l~s~~~   79 (351)
T 3f3f_A            5 PFDSGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSNWE---LSDSWRAHDSSIVAIDWASPEYG-RIIASASY   79 (351)
T ss_dssp             CEECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCCEE---EEEEEECCSSCEEEEEECCGGGC-SEEEEEET
T ss_pred             ccCcccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCcce---ecceeccCCCcEEEEEEcCCCCC-CEEEEEcC
Confidence            4567999999999999988 8999999999999999987643321   2334667999999999999  46 59999999


Q ss_pred             CCcEEEEECCCC---------eeEEEEecCCCcEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCceeeeee--------
Q psy17682        237 DNNVAIWNVGTG---------EIMIQIECHPDIVYSASWNWD--GSKLLTTCKDKKMRIINPRTGAIEEEAV--------  297 (490)
Q Consensus       237 dg~v~iwd~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~--------  297 (490)
                      ||.|++||++++         +.+..+..|...|.+++|+|+  +++|++++.||.|++||+++++.+..+.        
T Consensus        80 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~  159 (351)
T 3f3f_A           80 DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVL  159 (351)
T ss_dssp             TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESC
T ss_pred             CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccc
Confidence            999999999877         567788889999999999999  9999999999999999999887654433        


Q ss_pred             -----ecCCCceeEEEEeCC---CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCC----CeEEE
Q psy17682        298 -----CHEGSKATRAIYLKS---GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDT----NLVYL  365 (490)
Q Consensus       298 -----~~~~~~~~~~~~s~~---~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~----~~l~~  365 (490)
                           .+.. .+.++.|+|+   +.++++++   .++.+.+|+..............|...|.+++|+|++    ++| +
T Consensus       160 ~~~~~~~~~-~~~~~~~~p~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l-~  234 (351)
T 3f3f_A          160 SIPPANHLQ-SDFCLSWCPSRFSPEKLAVSA---LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLI-A  234 (351)
T ss_dssp             SCCCSSCSC-CCEEEEECCCSSSCCEEEEEE---TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEE-E
T ss_pred             ccccCCccc-ceeEEEeccCCCCCcEEEEec---CCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEE-E
Confidence                 2333 4899999997   88999998   6788877777654432233333577889999999998    566 8


Q ss_pred             EecCCCeEEEEEecCCCCe------------------------------------------eEEeeeee-CCCceeeEEE
Q psy17682        366 CGKGDSVIRYFEITAEPPF------------------------------------------VHYINTFQ-TPDPQRGIGM  402 (490)
Q Consensus       366 ~g~~dg~i~iwd~~~~~~~------------------------------------------~~~~~~~~-~~~~i~~~~~  402 (490)
                      +|+.||.|++||+..+...                                          ...+..+. +...|++++|
T Consensus       235 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~  314 (351)
T 3f3f_A          235 TGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSW  314 (351)
T ss_dssp             EEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEE
T ss_pred             EEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEE
Confidence            9999999999999875210                                          12233333 4578999999


Q ss_pred             eeCceeEEee--cceeEEEEecCCCceEEEEE
Q psy17682        403 MPKRGCDVNS--CEIGRFFRLNNSGLCQVVSM  432 (490)
Q Consensus       403 sp~~~~l~~~--~~~~~~~~~~~~~~~~~i~~  432 (490)
                      +|++.+++++  ++.+++|++..++.++.+..
T Consensus       315 s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~  346 (351)
T 3f3f_A          315 NLTGTILSSAGDDGKVRLWKATYSNEFKCMSV  346 (351)
T ss_dssp             CSSSCCEEEEETTSCEEEEEECTTSCEEEEEE
T ss_pred             cCCCCEEEEecCCCcEEEEecCcCcchhheee
Confidence            9999988887  45889999998875665543

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-32  Score=264.13  Aligned_cols=262  Identities=16%  Similarity=0.155  Sum_probs=211.4

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC--CCCEEEEEe
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT--AQNVLLTAG  235 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~  235 (490)
                      ..++.+|.+.|.+++|+|++ .+|++|+.||.|++|++.....     .....+.+|...|++++|+|+  + .+|++++
T Consensus         4 ~~~~~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~   76 (379)
T 3jrp_A            4 VVIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETH-----KLIDTLTGHEGPVWRVDWAHPKFG-TILASCS   76 (379)
T ss_dssp             -CCEEECCCCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEE-----EEEEEECCCSSCEEEEEECCGGGC-SEEEEEE
T ss_pred             cEEecCCcccEEEEEEcCCC-CEEEEEECCCcEEEEecCCCcc-----eeeeEecCCCCcEEEEEeCCCCCC-CEEEEec
Confidence            45778999999999999998 8999999999999999874321     222346679999999999877  6 4999999


Q ss_pred             CCCcEEEEECCCCe--eEEEEecCCCcEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCce--eeeeeecCCCceeEEEE
Q psy17682        236 SDNNVAIWNVGTGE--IMIQIECHPDIVYSASWNWD--GSKLLTTCKDKKMRIINPRTGAI--EEEAVCHEGSKATRAIY  309 (490)
Q Consensus       236 ~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~  309 (490)
                      .||.|++||+++++  .+..+..|...|.+++|+|+  +++|++++.|+.|++||++++..  ...+..|... +.+++|
T Consensus        77 ~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~-v~~~~~  155 (379)
T 3jrp_A           77 YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG-VNSASW  155 (379)
T ss_dssp             TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTC-EEEEEE
T ss_pred             cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCc-eEEEEE
Confidence            99999999999987  67777889999999999999  99999999999999999998743  3344466654 999999


Q ss_pred             eC-------------CCcEEEEEeCCCceeEEEEecCCCCCCCeEE--EeccCCCceeeeeecCC---CCeEEEEecCCC
Q psy17682        310 LK-------------SGLIFTTGFSKMSERQYSLRAPDHLDEPIVM--VELDTSNGVMFPLYDPD---TNLVYLCGKGDS  371 (490)
Q Consensus       310 s~-------------~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~--~~~~~~~~i~~~~~s~~---~~~l~~~g~~dg  371 (490)
                      +|             ++.++++++   .++.|++||++........  ....|...|.+++|+|+   +++| ++++.||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l-~s~~~dg  231 (379)
T 3jrp_A          156 APATIEEDGEHNGTKESRKFVTGG---ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYL-ASVSQDR  231 (379)
T ss_dssp             CCCC----------CTTCEEEEEE---TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE-EEEETTS
T ss_pred             cCccccccccccCCCCCCEEEEEe---CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeE-EEEeCCC
Confidence            99             689999998   6889999999876543222  22356778999999999   6776 8899999


Q ss_pred             eEEEEEecCCCCee--EEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCCceEEEE
Q psy17682        372 VIRYFEITAEPPFV--HYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSGLCQVVS  431 (490)
Q Consensus       372 ~i~iwd~~~~~~~~--~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~~~~~i~  431 (490)
                      .|++||+.+++...  .......+...|.+++|+|++.+++++  ++.+++|++......+++.
T Consensus       232 ~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~  295 (379)
T 3jrp_A          232 TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAG  295 (379)
T ss_dssp             CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEEEE
T ss_pred             EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcccccc
Confidence            99999999874321  222223356789999999999988876  4588999998665344443

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=1.4e-31  Score=250.43  Aligned_cols=244  Identities=16%  Similarity=0.245  Sum_probs=193.9

Q ss_pred             ecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEE
Q psy17682        162 GGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVA  241 (490)
Q Consensus       162 ~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~  241 (490)
                      .+|...|.+++|+|++ ++|++|+.||+|++|++++++.+..       +.+|...+.++.+.  + .++++++.++.++
T Consensus        64 ~~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~~~~~~~-------~~~h~~~~~~~~~~--~-~~l~s~~~~~~~~  132 (318)
T 4ggc_A           64 EQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRLRN-------MTSHSARVGSLSWN--S-YILSSGSRSGHIH  132 (318)
T ss_dssp             CSTTCCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEE-------EECCSSCEEEEEEE--T-TEEEEEETTSEEE
T ss_pred             cCCCCeEEEEEECCCC-CEEEEEECCCcEEEeecCCceeEEE-------ecCccceEEEeecC--C-CEEEEEecCCceE
Confidence            4788999999999998 8999999999999999998876554       45688888876654  4 4899999999999


Q ss_pred             EEECCCC-eeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee----eeeeecCCCceeEEEEeCCCc-E
Q psy17682        242 IWNVGTG-EIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIE----EEAVCHEGSKATRAIYLKSGL-I  315 (490)
Q Consensus       242 iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~s~~~~-~  315 (490)
                      +|+.... ..+..+.+|...+..+.+++++++|++++.|++|++||+++++..    .....+.+ .+..+.++|++. +
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~  211 (318)
T 4ggc_A          133 HHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQG-AVKAVAWCPWQSNV  211 (318)
T ss_dssp             EEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCS-CEEEEEECTTSTTE
T ss_pred             eeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCC-ceEEEEecCCCCcE
Confidence            9998865 456677889999999999999999999999999999999987532    22334444 488999998854 3


Q ss_pred             EEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEE-ecCCCeEEEEEecCCCCeeEEeeeeeCC
Q psy17682        316 FTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLC-GKGDSVIRYFEITAEPPFVHYINTFQTP  394 (490)
Q Consensus       316 l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-g~~dg~i~iwd~~~~~~~~~~~~~~~~~  394 (490)
                      +..++. ..++.|++||......   .....+...+..+.|+|+++.++++ |+.|+.|++||+.+++++ ..+.  .|.
T Consensus       212 ~~~~~~-~~~~~i~lwd~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~-~~l~--gH~  284 (318)
T 4ggc_A          212 LATGGG-TSDRHIRIWNVCSGAC---LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV-AELK--GHT  284 (318)
T ss_dssp             EEEEEC-TTTCEEEEEETTTCCE---EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE-EEEC--CCS
T ss_pred             EEEEec-CCCCEEEEEecccccc---cccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEE-EEEc--CCC
Confidence            333221 2689999999987653   3334566779999999999988543 458999999999998733 2222  356


Q ss_pred             CceeeEEEeeCceeEEee--cceeEEEEecCC
Q psy17682        395 DPQRGIGMMPKRGCDVNS--CEIGRFFRLNNS  424 (490)
Q Consensus       395 ~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~  424 (490)
                      .+|++++|+|++.+++++  ++.+++|++.+.
T Consensus       285 ~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~  316 (318)
T 4ggc_A          285 SRVLSLTMSPDGATVASAAADETLRLWRCFEL  316 (318)
T ss_dssp             SCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred             CCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence            799999999999999887  458999998764

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-33  Score=280.09  Aligned_cols=265  Identities=13%  Similarity=0.080  Sum_probs=203.1

Q ss_pred             EEeeCCCceEEEECCCCCCCCcccCC-CCcceeecccCCeeEEEECCCC-----CCEEEEEeCCCcEEEEECCCCCccc-
Q psy17682        130 IRKLKSQQALSILPPPSTAPNTGRIN-ADHALVGGHKGPVLDIAWSPHD-----DNVIASGSEDCVVKVWQIPDGGISR-  202 (490)
Q Consensus       130 ~~~~~~~g~i~v~~~~~~~~~~~~~~-~~~~~~~~h~~~V~~~~~~p~~-----~~~l~s~~~dg~i~iwd~~~~~~~~-  202 (490)
                      +++++.++.|++|++..     ++.. ....++.+|.+.|.+++|+|++     ..+||+++.||+|++||+.++.... 
T Consensus       176 laS~s~D~tI~iWd~~~-----~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~  250 (524)
T 2j04_B          176 FDKEKHSSCIQIFKMNT-----STLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVH  250 (524)
T ss_dssp             ------CEEEEEEEEET-----TTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSS
T ss_pred             hccCCCCceEEEEEccC-----CCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccc
Confidence            45577899999999852     2211 0123467888999999999961     2699999999999999998765321 


Q ss_pred             ---ccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC-eeEEEEecCCCcEEEE--EEcCCC-CEEEE
Q psy17682        203 ---TLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG-EIMIQIECHPDIVYSA--SWNWDG-SKLLT  275 (490)
Q Consensus       203 ---~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~--~~~~~~-~~l~~  275 (490)
                         ....|...+.+|...|++++|++++  .|++|+.||+|++||++++ .+...+.+|...|.++  +|+|++ .+|++
T Consensus       251 ~~~~~~~p~~~l~~h~~~v~sv~~s~~~--~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS  328 (524)
T 2j04_B          251 VFKMCEKPSLTLSLADSLITTFDFLSPT--TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVST  328 (524)
T ss_dssp             EEECCCSCSEEECCTTTCEEEEEESSSS--EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEE
T ss_pred             cceeecCceEEEEcCCCCEEEEEecCCC--eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEE
Confidence               1234455678899999999999864  7999999999999999876 4556688999999999  578887 89999


Q ss_pred             EeCCCeEEEEeCCCCceeeeeeecCC-CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeee
Q psy17682        276 TCKDKKMRIINPRTGAIEEEAVCHEG-SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFP  354 (490)
Q Consensus       276 ~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~  354 (490)
                      ++.|++|+|||++++++...+.+|.. ..+.+++|+|++..+++++   .++.|++||++...+...+.  .|...|.++
T Consensus       329 ~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~---~d~tv~lwd~~~~~~~~~l~--gH~~~V~sv  403 (524)
T 2j04_B          329 VAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSD---GASSLRAVPSRAAFAVHPLV--SRETTITAI  403 (524)
T ss_dssp             EETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEEC---SSSEEEEEETTCTTCCEEEE--ECSSCEEEE
T ss_pred             eccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeC---CCCcEEEEECcccccceeee--cCCCceEEE
Confidence            99999999999999888777776653 2378899999999999887   58899999999877655443  577899999


Q ss_pred             eecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee---eeCCCceeeEEEeeCceeE
Q psy17682        355 LYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT---FQTPDPQRGIGMMPKRGCD  409 (490)
Q Consensus       355 ~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~i~~~~~sp~~~~l  409 (490)
                      +|+|+|++| ++|+.||+|++||+....  ......   ......+.+++|+|++..+
T Consensus       404 a~Sp~g~~l-~Sgs~Dgtv~lwd~~~~~--~~~~~~~~~~~~~~~v~~v~~sp~g~~~  458 (524)
T 2j04_B          404 GVSRLHPMV-LAGSADGSLIITNAARRL--LHGIKNSSATQKSLRLWKWDYSIKDDKY  458 (524)
T ss_dssp             ECCSSCCBC-EEEETTTEEECCBSCSST--TTCC------CCCCEEEECBCCSSSCEE
T ss_pred             EeCCCCCeE-EEEECCCEEEEEechHhh--ccccccCccceeeeEEEEeccCCCCCeE
Confidence            999999998 799999999999986542  111110   1111246799999999854

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=2e-33  Score=268.17  Aligned_cols=246  Identities=13%  Similarity=0.187  Sum_probs=202.4

Q ss_pred             ccceeeeEEeccCCC---ceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEec
Q psy17682         43 HQRRVGLVLWHPTAQ---NVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITIS  119 (490)
Q Consensus        43 H~~~V~~v~~~p~~~---~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  119 (490)
                      |...|++++|+|++.   .+|++|+.||.|++||+.+++                                         
T Consensus        68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~-----------------------------------------  106 (366)
T 3k26_A           68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ-----------------------------------------  106 (366)
T ss_dssp             TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC-----------------------------------------
T ss_pred             CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce-----------------------------------------
Confidence            668899999999942   699999999999999987643                                         


Q ss_pred             cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECC-CCCCEEEEEeCCCcEEEEECCCC
Q psy17682        120 EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSP-HDDNVIASGSEDCVVKVWQIPDG  198 (490)
Q Consensus       120 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~  198 (490)
                                                           ....+.+|.+.|.+++|+| ++ .+|++|+.||.|++||++++
T Consensus       107 -------------------------------------~~~~~~~~~~~i~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~  148 (366)
T 3k26_A          107 -------------------------------------CIKHYVGHGNAINELKFHPRDP-NLLLSVSKDHALRLWNIQTD  148 (366)
T ss_dssp             -------------------------------------EEEEEESCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTTT
T ss_pred             -------------------------------------EeeeecCCCCcEEEEEECCCCC-CEEEEEeCCCeEEEEEeecC
Confidence                                                 0113457999999999999 55 89999999999999999888


Q ss_pred             CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-----------------------
Q psy17682        199 GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-----------------------  255 (490)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-----------------------  255 (490)
                      +....+..    +.+|...|.+++|+|++. +|++++.||.|++||+++++.+..+.                       
T Consensus       149 ~~~~~~~~----~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (366)
T 3k26_A          149 TLVAIFGG----VEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPD  223 (366)
T ss_dssp             EEEEEECS----TTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCS
T ss_pred             eEEEEecc----cccccCceeEEEECCCCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCc
Confidence            76554321    246999999999999985 99999999999999998776443333                       


Q ss_pred             -----cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--------------eeeeeecCCCceeEEEEeCC--Cc
Q psy17682        256 -----CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI--------------EEEAVCHEGSKATRAIYLKS--GL  314 (490)
Q Consensus       256 -----~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--------------~~~~~~~~~~~~~~~~~s~~--~~  314 (490)
                           .|...|.+++|+  +++|++++.|+.|++||++++..              +..+..|... +.+++|+|+  ++
T Consensus       224 ~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~~  300 (366)
T 3k26_A          224 FSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCD-IWYMRFSMDFWQK  300 (366)
T ss_dssp             EEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCC-SSCCCCEECTTSS
T ss_pred             cccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCc-EEEEEEcCCCCCc
Confidence                 389999999998  77999999999999999987754              5666677665 899999999  99


Q ss_pred             EEEEEeCCCceeEEEEecCCCCCCCe-EE-EeccC--CCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        315 IFTTGFSKMSERQYSLRAPDHLDEPI-VM-VELDT--SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       315 ~l~~~~~~~~~~~i~iwd~~~~~~~~-~~-~~~~~--~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      +|++|+   .++.|++||+.+.+... .. ....+  ...|.+++|+|++++| ++++.||.|++||+.
T Consensus       301 ~l~~~~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~dg~i~iwd~~  365 (366)
T 3k26_A          301 MLALGN---QVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSIL-IAVCDDASIWRWDRL  365 (366)
T ss_dssp             EEEEEC---TTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEE-EEEETTSEEEEEEC-
T ss_pred             EEEEEe---cCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeE-EEEeCCCEEEEEEec
Confidence            999998   68999999999865432 11 22223  5789999999999998 789999999999985

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.7e-33  Score=293.65  Aligned_cols=255  Identities=20%  Similarity=0.256  Sum_probs=207.3

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      ...+.||.+.|++++|+|++ .+|++|+.||+|++||+..+..                                     
T Consensus         2 ~~~l~gH~~~V~~l~~s~dg-~~latg~~dg~I~vwd~~~~~~-------------------------------------   43 (753)
T 3jro_A            2 VVIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETH-------------------------------------   43 (753)
T ss_dssp             ------CCCCEEEECCCSSS-CCEEEEETTTEEEEEEEETTEE-------------------------------------
T ss_pred             eeecccCcceeEEEEECCCC-CeEEEEECCCcEEEEecCCCCC-------------------------------------
Confidence            35689999999999999999 8999999999999999864210                                     


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCC--CCCEEEEEeCCCcEEEEE
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPH--DDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~--~~~~l~s~~~dg~i~iwd  194 (490)
                                                             .....+.+|.++|.+++|+|+  + ++|++|+.||.|++||
T Consensus        44 ---------------------------------------~~~~~l~~h~~~V~~l~~s~~~~~-~~l~s~s~Dg~I~vwd   83 (753)
T 3jro_A           44 ---------------------------------------KLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWK   83 (753)
T ss_dssp             ---------------------------------------EEEEEECCCSSCEEEEEECCTTSC-SEEEEEETTSCEEEEE
T ss_pred             ---------------------------------------ccceeccCCcCceEEEEecCCCCC-CEEEEEeCCCeEEEEE
Confidence                                                   011245689999999999987  6 8999999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeC--CCCEEEEEeCCCcEEEEECCCCe--eEEEEecCCCcEEEEEEcC--
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT--AQNVLLTAGSDNNVAIWNVGTGE--IMIQIECHPDIVYSASWNW--  268 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~--  268 (490)
                      +.+++..     ....+.+|...|.+++|+|+  + .++++|+.||.|++||++++.  ....+.+|...|.+++|+|  
T Consensus        84 ~~~~~~~-----~~~~~~~h~~~V~~v~~sp~~~~-~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~  157 (753)
T 3jro_A           84 EENGRWS-----QIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT  157 (753)
T ss_dssp             EETTEEE-----EEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC
T ss_pred             CCCCccc-----ccccccCCCCCeEEEEECCCCCC-CEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcc
Confidence            9876521     22335669999999999999  7 499999999999999998773  4456678999999999999  


Q ss_pred             -----------CCCEEEEEeCCCeEEEEeCCCC----ceeeeeeecCCCceeEEEEeCC---CcEEEEEeCCCceeEEEE
Q psy17682        269 -----------DGSKLLTTCKDKKMRIINPRTG----AIEEEAVCHEGSKATRAIYLKS---GLIFTTGFSKMSERQYSL  330 (490)
Q Consensus       269 -----------~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~s~~---~~~l~~~~~~~~~~~i~i  330 (490)
                                 ++..+++++.||.|++||++++    .....+.+|... +.+++|+|+   +.++++|+   .|+.|++
T Consensus       158 ~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~-V~~l~~sp~~~~~~~l~s~s---~Dg~I~i  233 (753)
T 3jro_A          158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW-VRDVAWSPTVLLRSYLASVS---QDRTCII  233 (753)
T ss_dssp             ---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC-EEEEEECCCCSSSEEEEEEE---SSSCEEE
T ss_pred             cccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc-EEEEEeccCCCCCCEEEEEe---cCCEEEE
Confidence                       5899999999999999999887    345566677765 999999999   89999998   6899999


Q ss_pred             ecCCCCCCCeE---EEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        331 RAPDHLDEPIV---MVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       331 wd~~~~~~~~~---~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      ||+++......   .....+...|.+++|+|+|+++ ++|+.||.|++|++..
T Consensus       234 wd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l-~s~s~Dg~I~vwd~~~  285 (753)
T 3jro_A          234 WTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVL-ALSGGDNKVTLWKENL  285 (753)
T ss_dssp             EEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCE-EEECSSSCEECCBCCS
T ss_pred             ecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEE-EEEcCCCEEEEEecCC
Confidence            99987643221   1122466779999999999998 7889999999999984

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.5e-32  Score=265.53  Aligned_cols=253  Identities=9%  Similarity=0.004  Sum_probs=199.5

Q ss_pred             eeecccCCeeEEEECCCCCCE-EEEEeCCCcEEEEECC--CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNV-IASGSEDCVVKVWQIP--DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS  236 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~-l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~  236 (490)
                      ...+|.+.|.+++|+|++ .+ +++|+.||.|++||+.  +++....+.     ...|...|.+++|+|++. +|++|+.
T Consensus        97 ~~~~~~~~v~~~~~s~d~-~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~-----~~~~~~~v~~~~~sp~~~-~l~~~~~  169 (450)
T 2vdu_B           97 GAPPIYSYIRNLRLTSDE-SRLIACADSDKSLLVFDVDKTSKNVLKLRK-----RFCFSKRPNAISIAEDDT-TVIIADK  169 (450)
T ss_dssp             ---CCCCCEEEEEECTTS-SEEEEEEGGGTEEEEEEECSSSSSCEEEEE-----EEECSSCEEEEEECTTSS-EEEEEET
T ss_pred             CCCccCCceEEEEEcCCC-CEEEEEECCCCeEEEEECcCCCCceeeeee-----cccCCCCceEEEEcCCCC-EEEEEeC
Confidence            345788899999999998 56 5999999999999998  776655432     124778999999999995 9999999


Q ss_pred             CCcEEEEECCCCeeEE----EEecCCCcEEEEEEcCC---CCEEEEEeCCCeEEEEeCCCCceeeee-eecCCCceeEEE
Q psy17682        237 DNNVAIWNVGTGEIMI----QIECHPDIVYSASWNWD---GSKLLTTCKDKKMRIINPRTGAIEEEA-VCHEGSKATRAI  308 (490)
Q Consensus       237 dg~v~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~  308 (490)
                      +|.|++|++.+++...    .+.+|...|.+++|+|+   +++|++++.|+.|++||+++++.+..+ .+|... +.+++
T Consensus       170 ~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~-v~~~~  248 (450)
T 2vdu_B          170 FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF-VSSIC  248 (450)
T ss_dssp             TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC-EEEEE
T ss_pred             CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc-eEEEE
Confidence            9999999998876543    67789999999999999   999999999999999999999888774 467664 99999


Q ss_pred             EeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec-----------------------cCCCceeeeeecCCCCeEEE
Q psy17682        309 YLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-----------------------DTSNGVMFPLYDPDTNLVYL  365 (490)
Q Consensus       309 ~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-----------------------~~~~~i~~~~~s~~~~~l~~  365 (490)
                      |+ ++.+|++++   .|+.|++||+++++....+...                       .....+..++|+|++++|++
T Consensus       249 ~s-d~~~l~s~~---~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~  324 (450)
T 2vdu_B          249 CG-KDYLLLSAG---GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAF  324 (450)
T ss_dssp             EC-STTEEEEEE---SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEE
T ss_pred             EC-CCCEEEEEe---CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEE
Confidence            99 999999998   6899999999987644333211                       12345889999999999955


Q ss_pred             EecCCCeEEEEEe--cCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--------eeEEEEecCCC
Q psy17682        366 CGKGDSVIRYFEI--TAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--------IGRFFRLNNSG  425 (490)
Q Consensus       366 ~g~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--------~~~~~~~~~~~  425 (490)
                      ++..|+.|++|++  ..+. ....+..+..+..+.+++|+|++.+++.++.        .+++|.+....
T Consensus       325 ~~~~d~~i~iw~~~~~~~~-~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~  393 (450)
T 2vdu_B          325 FVEATKCIIILEMSEKQKG-DLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNE  393 (450)
T ss_dssp             EETTCSEEEEEEECSSSTT-CEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTT
T ss_pred             EECCCCeEEEEEeccCCCC-ceeeccEeccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCC
Confidence            5448999999999  4442 2234444555578999999997655554432        36888877543

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=3e-31  Score=260.44  Aligned_cols=293  Identities=16%  Similarity=0.184  Sum_probs=237.3

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK  104 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (490)
                      +..|+..+ .+.+..+.+|.+.|.+++|++   .+|++|+.||+|++||+.+++.                  ...+.  
T Consensus       141 i~vwd~~~-~~~~~~~~~h~~~v~~~~~~~---~~l~s~~~dg~i~vwd~~~~~~------------------~~~~~--  196 (445)
T 2ovr_B          141 LKVWSAVT-GKCLRTLVGHTGGVWSSQMRD---NIIISGSTDRTLKVWNAETGEC------------------IHTLY--  196 (445)
T ss_dssp             EEEEETTT-CCEEEECCCCSSCEEEEEEET---TEEEEEETTSCEEEEETTTTEE------------------EEEEC--
T ss_pred             EEEEECCC-CcEEEEEcCCCCCEEEEEecC---CEEEEEeCCCeEEEEECCcCcE------------------EEEEC--
Confidence            34455432 356778999999999999983   6899999999999999987641                  11111  


Q ss_pred             CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE
Q psy17682        105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG  184 (490)
Q Consensus       105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~  184 (490)
                         .+...+.++++++.       .+++++.+|.+.+|++.     .   ......+.+|...|.+++|  ++ .++++|
T Consensus       197 ---~h~~~v~~~~~~~~-------~l~s~s~dg~i~~wd~~-----~---~~~~~~~~~~~~~v~~~~~--~~-~~l~~~  255 (445)
T 2ovr_B          197 ---GHTSTVRCMHLHEK-------RVVSGSRDATLRVWDIE-----T---GQCLHVLMGHVAAVRCVQY--DG-RRVVSG  255 (445)
T ss_dssp             ---CCSSCEEEEEEETT-------EEEEEETTSEEEEEESS-----S---CCEEEEEECCSSCEEEEEE--CS-SCEEEE
T ss_pred             ---CCCCcEEEEEecCC-------EEEEEeCCCEEEEEECC-----C---CcEEEEEcCCcccEEEEEE--CC-CEEEEE
Confidence               12335778888655       47889999999999985     2   2345677899999999999  35 789999


Q ss_pred             eCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEE
Q psy17682        185 SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSA  264 (490)
Q Consensus       185 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~  264 (490)
                      +.||.|++||+++++.+..       +.+|...|.++.|  ++ ..+++++.|+.|++||+++++.+..+.+|...+.++
T Consensus       256 ~~dg~i~iwd~~~~~~~~~-------~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~  325 (445)
T 2ovr_B          256 AYDFMVKVWDPETETCLHT-------LQGHTNRVYSLQF--DG-IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM  325 (445)
T ss_dssp             ETTSCEEEEEGGGTEEEEE-------ECCCSSCEEEEEE--CS-SEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEE
T ss_pred             cCCCEEEEEECCCCcEeEE-------ecCCCCceEEEEE--CC-CEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEE
Confidence            9999999999988765544       4569999999999  55 489999999999999999999999999999999988


Q ss_pred             EEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeee---cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeE
Q psy17682        265 SWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVC---HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIV  341 (490)
Q Consensus       265 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~  341 (490)
                      .++  ++++++++.||.|++||+++++.+..+..   |.. .+.+++|+  +.++++|+   .|+.|++||+.+++....
T Consensus       326 ~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~v~~~~~~--~~~l~s~~---~dg~v~iwd~~~~~~~~~  397 (445)
T 2ovr_B          326 ELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS-AVTCLQFN--KNFVITSS---DDGTVKLWDLKTGEFIRN  397 (445)
T ss_dssp             EEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSS-CEEEEEEC--SSEEEEEE---TTSEEEEEETTTCCEEEE
T ss_pred             EEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCC-CEEEEEEC--CCEEEEEe---CCCeEEEEECCCCceeee
Confidence            885  67999999999999999999999888875   444 48888885  67888888   689999999998764433


Q ss_pred             EEe---ccCCCceeeeeecCCCCeEEEEecCCCe----EEEEEecCC
Q psy17682        342 MVE---LDTSNGVMFPLYDPDTNLVYLCGKGDSV----IRYFEITAE  381 (490)
Q Consensus       342 ~~~---~~~~~~i~~~~~s~~~~~l~~~g~~dg~----i~iwd~~~~  381 (490)
                      +..   ..+...|.+++|+|++.++ ++|+.||.    |.+||+...
T Consensus       398 ~~~~~~~~~~~~v~~~~~s~~~~~l-a~~~~dg~~~~~l~v~df~~~  443 (445)
T 2ovr_B          398 LVTLESGGSGGVVWRIRASNTKLVC-AVGSRNGTEETKLLVLDFDVD  443 (445)
T ss_dssp             EEECTTGGGTCEEEEEEECSSEEEE-EEECSSSSSCCEEEEEECCCC
T ss_pred             eeccccCCCCceEEEEEecCCEEEE-EEcccCCCCccEEEEEECCCC
Confidence            322   2456679999999999888 78999997    999999764

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=4.3e-33  Score=267.42  Aligned_cols=250  Identities=12%  Similarity=0.126  Sum_probs=196.3

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC--CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG--GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      ....|.++|++++|+|++ ++|++|+.|+.|++||+.++  +....       +.+|...|.+++|+|++. +|++++.|
T Consensus         6 ~~~~~~~~v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~~~~~~~~-------~~~h~~~v~~~~~s~~~~-~l~s~s~d   76 (377)
T 3dwl_C            6 VLHILPKPSYEHAFNSQR-TEFVTTTATNQVELYEQDGNGWKHART-------FSDHDKIVTCVDWAPKSN-RIVTCSQD   76 (377)
T ss_dssp             EEEECSSCCSCCEECSSS-SEEECCCSSSCBCEEEEETTEEEECCC-------BCCCSSCEEEEEECTTTC-CEEEEETT
T ss_pred             eEecCCCcEEEEEECCCC-CEEEEecCCCEEEEEEccCCceEEEEE-------EecCCceEEEEEEeCCCC-EEEEEeCC
Confidence            345577899999999988 89999999999999999876  33333       556999999999999985 89999999


Q ss_pred             CcEEEEECCCCe---eEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc---eeeeeee-cCCCceeEEEEe
Q psy17682        238 NNVAIWNVGTGE---IMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGA---IEEEAVC-HEGSKATRAIYL  310 (490)
Q Consensus       238 g~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~-~~~~~~~~~~~s  310 (490)
                      +.|++||+.+++   ....+..|...|.+++|+|++++|++++.|+.|++||+++++   ....+.. |... +.+++|+
T Consensus        77 ~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~-v~~~~~~  155 (377)
T 3dwl_C           77 RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRST-ILSLDWH  155 (377)
T ss_dssp             SSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSC-EEEEEEC
T ss_pred             CeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCC-eEEEEEc
Confidence            999999999877   667777899999999999999999999999999999999887   3666666 6654 9999999


Q ss_pred             CCCcEEEEEeCCCceeEEEEecCCCCCC---------------CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEE
Q psy17682        311 KSGLIFTTGFSKMSERQYSLRAPDHLDE---------------PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRY  375 (490)
Q Consensus       311 ~~~~~l~~~~~~~~~~~i~iwd~~~~~~---------------~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~i  375 (490)
                      |++++|++++   .|+.|++||+.....               ......+.|...|.+++|+|++++| ++++.||.|++
T Consensus       156 ~~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~d~~i~i  231 (377)
T 3dwl_C          156 PNNVLLAAGC---ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNAL-AYAGHDSSVTI  231 (377)
T ss_dssp             TTSSEEEEEE---SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCE-EEEETTTEEC-
T ss_pred             CCCCEEEEEe---CCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEE-EEEeCCCcEEE
Confidence            9999999998   689999999863220               1122333677789999999999998 78999999999


Q ss_pred             EEecCCCCeeEEeeeee-CCCceeeEEEeeCceeEEeecc-eeEEEEecC
Q psy17682        376 FEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGCDVNSCE-IGRFFRLNN  423 (490)
Q Consensus       376 wd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~-~~~~~~~~~  423 (490)
                      ||+.+++.....+..+. +..+|.+++|+|++.+++++++ ...+|....
T Consensus       232 wd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~  281 (377)
T 3dwl_C          232 AYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNE  281 (377)
T ss_dssp             CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC
T ss_pred             EECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCC
Confidence            99999875333233333 4568999999999999888854 445666554

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=4e-32  Score=258.95  Aligned_cols=298  Identities=10%  Similarity=0.033  Sum_probs=212.7

Q ss_pred             cCCeeEeccccccceEEEEEeeCC-------CceEEEECCCCCCCCcccCC--CCcceeecccCCeeEEEECCCCCCEEE
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKS-------QQALSILPPPSTAPNTGRIN--ADHALVGGHKGPVLDIAWSPHDDNVIA  182 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~-------~g~i~v~~~~~~~~~~~~~~--~~~~~~~~h~~~V~~~~~~p~~~~~l~  182 (490)
                      .|.+++|+|+.     .+++++++       ++.|++|++...........  .....+.+|...|.++++++   ..++
T Consensus        16 PV~sv~fs~dg-----~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~---~~~~   87 (365)
T 4h5i_A           16 PAYGAKFLNND-----TLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK---GIIL   87 (365)
T ss_dssp             CEEEEEEEETT-----EEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET---TEEE
T ss_pred             CEEEEEEeCCC-----cEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC---CEEE
Confidence            68999999996     45555543       33699998863221111000  01124678999999998864   4566


Q ss_pred             EE-----------eCCCcEEEEECCCCCcccccccce--eeecccccCEEEEEEeeCCCCEEE--EEeCCCcEEEEECCC
Q psy17682        183 SG-----------SEDCVVKVWQIPDGGISRTLTEPV--VDLLYHQRRVGLVLWHPTAQNVLL--TAGSDNNVAIWNVGT  247 (490)
Q Consensus       183 s~-----------~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~p~~~~~l~--s~~~dg~v~iwd~~~  247 (490)
                      +|           +.|+.+++|++.............  .....+...+.+++|+|+|+ +++  +++.|++|+|||+++
T Consensus        88 ~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~-~la~as~~~d~~i~iwd~~~  166 (365)
T 4h5i_A           88 VGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGT-VAAIASSKVPAIMRIIDPSD  166 (365)
T ss_dssp             EECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSS-CEEEEESCSSCEEEEEETTT
T ss_pred             EEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCC-EEEEEECCCCCEEEEeECCC
Confidence            55           457789999987654322211110  11223556789999999996 554  444789999999999


Q ss_pred             CeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee--ecCCCceeEEEEeCCCcEEEEEeCCC-c
Q psy17682        248 GEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV--CHEGSKATRAIYLKSGLIFTTGFSKM-S  324 (490)
Q Consensus       248 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~s~~~~~l~~~~~~~-~  324 (490)
                      ++.+..+. |...|.+++|+|+|+++++++. +.+++|+..+++.+....  .|.. .+.+++|+|++.++++++.++ .
T Consensus       167 ~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~-~v~~v~fspdg~~l~~~s~d~~~  243 (365)
T 4h5i_A          167 LTEKFEIE-TRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNW-SLSKINFIADDTVLIAASLKKGK  243 (365)
T ss_dssp             TEEEEEEE-CSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTE-EEEEEEEEETTEEEEEEEESSSC
T ss_pred             CcEEEEeC-CCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCC-CEEEEEEcCCCCEEEEEecCCcc
Confidence            99998887 7788999999999999999885 456677777776554332  4444 489999999999999887432 2


Q ss_pred             eeEEEEecCCCCCCCeE--EEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEE
Q psy17682        325 ERQYSLRAPDHLDEPIV--MVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGM  402 (490)
Q Consensus       325 ~~~i~iwd~~~~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~  402 (490)
                      ...+++|++........  .....+...|.+++|+|||++| ++|+.|+.|+|||+.+++++...+.  .|..+|++++|
T Consensus       244 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~l-asgs~D~~V~iwd~~~~~~~~~~~~--gH~~~V~~v~f  320 (365)
T 4h5i_A          244 GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELA-VLASNDNSIALVKLKDLSMSKIFKQ--AHSFAITEVTI  320 (365)
T ss_dssp             CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEE-EEEETTSCEEEEETTTTEEEEEETT--SSSSCEEEEEE
T ss_pred             eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCce-EEEcCCCEEEEEECCCCcEEEEecC--cccCCEEEEEE
Confidence            23688899876543221  1223567789999999999998 8999999999999999874322222  35679999999


Q ss_pred             eeCceeEEee--cceeEEEEecCC
Q psy17682        403 MPKRGCDVNS--CEIGRFFRLNNS  424 (490)
Q Consensus       403 sp~~~~l~~~--~~~~~~~~~~~~  424 (490)
                      +|||.+|+++  ++.+|+|++..+
T Consensus       321 Spdg~~laS~S~D~tvrvw~ip~~  344 (365)
T 4h5i_A          321 SPDSTYVASVSAANTIHIIKLPLN  344 (365)
T ss_dssp             CTTSCEEEEEETTSEEEEEECCTT
T ss_pred             CCCCCEEEEEeCCCeEEEEEcCCC
Confidence            9999999987  569999998654

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=2.4e-31  Score=262.64  Aligned_cols=273  Identities=12%  Similarity=0.131  Sum_probs=226.0

Q ss_pred             CCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEE
Q psy17682        113 ANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKV  192 (490)
Q Consensus       113 v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~i  192 (490)
                      +.++.++++       .+++++.+|.|++|++.     .+   +....+.+|.+.|.+++|+|++  ++++|+.||+|++
T Consensus       125 ~~~~~~~~~-------~l~sgs~dg~i~vwd~~-----~~---~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~v  187 (464)
T 3v7d_B          125 ITCLQFEDN-------YVITGADDKMIRVYDSI-----NK---KFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRV  187 (464)
T ss_dssp             EEEEEEETT-------EEEEEETTSCEEEEETT-----TT---EEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEEE
T ss_pred             EEEEEECCC-------EEEEEcCCCcEEEEECC-----CC---cEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEE
Confidence            345666544       68889999999999985     22   2456778999999999999865  8999999999999


Q ss_pred             EECCCCCcccccccceeeecccccCEEEEEEee--CCCCEEEEEeCCCcEEEEECCCCee--------------------
Q psy17682        193 WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP--TAQNVLLTAGSDNNVAIWNVGTGEI--------------------  250 (490)
Q Consensus       193 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--~~~~~l~s~~~dg~v~iwd~~~~~~--------------------  250 (490)
                      ||+++++....       +.+|...|.+++|++  ++ .++++|+.|+.|++||+++++.                    
T Consensus       188 wd~~~~~~~~~-------~~~h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (464)
T 3v7d_B          188 WDIKKGCCTHV-------FEGHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEEN  259 (464)
T ss_dssp             EETTTTEEEEE-------ECCCSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGC
T ss_pred             EECCCCcEEEE-------ECCCCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCC
Confidence            99998866554       456999999999996  44 5899999999999999987652                    


Q ss_pred             ---EEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeE
Q psy17682        251 ---MIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQ  327 (490)
Q Consensus       251 ---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~  327 (490)
                         +..+.+|...+.++  +++++++++++.||.|++||+++++++..+.+|... +.+++|+|++.++++|+   .|+.
T Consensus       260 ~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~sg~---~dg~  333 (464)
T 3v7d_B          260 PYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDR-IYSTIYDHERKRCISAS---MDTT  333 (464)
T ss_dssp             TTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC-EEEEEEETTTTEEEEEE---TTSC
T ss_pred             eEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCC-EEEEEEcCCCCEEEEEe---CCCc
Confidence               45567888888887  567899999999999999999999999999888775 99999999999999998   6899


Q ss_pred             EEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce
Q psy17682        328 YSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG  407 (490)
Q Consensus       328 i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~  407 (490)
                      |++||+++++....  ...|...|.++.|+  ++++ ++|+.||.|++||+.+++.    .....+...+..++|+|++.
T Consensus       334 i~vwd~~~~~~~~~--~~~h~~~v~~~~~~--~~~l-~s~s~dg~v~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~  404 (464)
T 3v7d_B          334 IRIWDLENGELMYT--LQGHTALVGLLRLS--DKFL-VSAAADGSIRGWDANDYSR----KFSYHHTNLSAITTFYVSDN  404 (464)
T ss_dssp             EEEEETTTTEEEEE--ECCCSSCEEEEEEC--SSEE-EEEETTSEEEEEETTTCCE----EEEEECTTCCCEEEEEECSS
T ss_pred             EEEEECCCCcEEEE--EeCCCCcEEEEEEc--CCEE-EEEeCCCcEEEEECCCCce----eeeecCCCCccEEEEEeCCC
Confidence            99999988653222  23567789999997  4676 7899999999999998762    23334556788899999999


Q ss_pred             eEEee-cceeEEEEecCCC
Q psy17682        408 CDVNS-CEIGRFFRLNNSG  425 (490)
Q Consensus       408 ~l~~~-~~~~~~~~~~~~~  425 (490)
                      +++++ ++.+++|++.+++
T Consensus       405 ~l~~~~dg~i~iwd~~~g~  423 (464)
T 3v7d_B          405 ILVSGSENQFNIYNLRSGK  423 (464)
T ss_dssp             EEEEEETTEEEEEETTTCC
T ss_pred             EEEEecCCeEEEEECCCCc
Confidence            88877 5589999999887

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=5.8e-32  Score=264.62  Aligned_cols=268  Identities=13%  Similarity=0.162  Sum_probs=206.5

Q ss_pred             eeeeccCCCC-CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccC
Q psy17682         25 LTYFSPRTLT-EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGG  103 (490)
Q Consensus        25 ~~~~~~~~~~-~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (490)
                      +..|+..... .....+.||.+.|++|+|+|.+..+|+|||.||+|++||++.+..                ....   .
T Consensus       144 i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~----------------~~~~---~  204 (435)
T 4e54_B          144 IMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNIL----------------RVFA---S  204 (435)
T ss_dssp             EEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEE----------------EEEE---C
T ss_pred             EEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCce----------------eEEe---c
Confidence            5667765443 345568899999999999996558999999999999999976431                0000   0


Q ss_pred             CCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEE
Q psy17682        104 KGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIAS  183 (490)
Q Consensus       104 ~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s  183 (490)
                        .......+.+++|+|+.     ..+++++.+|.|.+|++.         ...+..+.+|.+.|.+++|+|++..+|++
T Consensus       205 --~~~~~~~~~~~~~~~~~-----~~l~~g~~dg~i~~wd~~---------~~~~~~~~~h~~~v~~v~~~p~~~~~~~s  268 (435)
T 4e54_B          205 --SDTINIWFCSLDVSASS-----RMVVTGDNVGNVILLNMD---------GKELWNLRMHKKKVTHVALNPCCDWFLAT  268 (435)
T ss_dssp             --CSSCSCCCCCEEEETTT-----TEEEEECSSSBEEEEESS---------SCBCCCSBCCSSCEEEEEECTTCSSEEEE
T ss_pred             --cCCCCccEEEEEECCCC-----CEEEEEeCCCcEeeeccC---------cceeEEEecccceEEeeeecCCCceEEEE
Confidence              11122356788999885     367889999999999985         12345678999999999999998779999


Q ss_pred             EeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCC----
Q psy17682        184 GSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPD----  259 (490)
Q Consensus       184 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~----  259 (490)
                      |+.|++|++||+++.+....+..    ..+|...|++++|+|++. +|++++.||.|++||+++++....+..|..    
T Consensus       269 ~s~d~~v~iwd~~~~~~~~~~~~----~~~h~~~v~~~~~spdg~-~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~  343 (435)
T 4e54_B          269 ASVDQTVKIWDLRQVRGKASFLY----SLPHRHPVNAACFSPDGA-RLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQ  343 (435)
T ss_dssp             EETTSBCCEEETTTCCSSSCCSB----CCBCSSCEEECCBCTTSS-EEEEEESSSCEEEEESSSSSSEEEECCCCCCCCS
T ss_pred             ecCcceeeEEecccccccceEEE----eeeccccccceeECCCCC-eeEEEcCCCEEEEEECCCCccceEEecccccccc
Confidence            99999999999988765544322    456999999999999995 999999999999999999887777765543    


Q ss_pred             --cEEEEEEcCCCCEEEEEe------------CCCeEEEEeCCCCceeeeeee-cCCCceeEE-EEeCCCcEEEEEeCCC
Q psy17682        260 --IVYSASWNWDGSKLLTTC------------KDKKMRIINPRTGAIEEEAVC-HEGSKATRA-IYLKSGLIFTTGFSKM  323 (490)
Q Consensus       260 --~v~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~-~~s~~~~~l~~~~~~~  323 (490)
                        .+....|+|++..+++++            .++.|++||..+++.+..+.. |... +.++ +|+|+|.+|++|+   
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~-v~s~~~fspdg~~lasg~---  419 (435)
T 4e54_B          344 HLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSG-ISSLNEFNPMGDTLASAM---  419 (435)
T ss_dssp             SSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCC-CCCEEEECTTSSCEEEEC---
T ss_pred             cceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCc-EEEEEEECCCCCEEEEEc---
Confidence              234567888877777764            235799999999998888764 4444 6655 7999999999885   


Q ss_pred             ceeEEEEecCCCCC
Q psy17682        324 SERQYSLRAPDHLD  337 (490)
Q Consensus       324 ~~~~i~iwd~~~~~  337 (490)
                       ++.|+||+++.++
T Consensus       420 -d~~i~iW~~~~gk  432 (435)
T 4e54_B          420 -GYHILIWSQQEAR  432 (435)
T ss_dssp             -SSEEEECCCC---
T ss_pred             -CCcEEEEECCcCe
Confidence             6789999998764

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.8e-31  Score=251.82  Aligned_cols=249  Identities=16%  Similarity=0.209  Sum_probs=209.2

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      ...+.+|.+.|++++|+|++ .+|++|+.||.|++||+.+++.+..       +.+|...|.+++|+|++. +|++++.|
T Consensus        25 ~~~l~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~~~~~-------~~~h~~~v~~~~~~~~~~-~l~s~~~d   95 (369)
T 3zwl_B           25 AIKLTGHERPLTQVKYNKEG-DLLFSCSKDSSASVWYSLNGERLGT-------LDGHTGTIWSIDVDCFTK-YCVTGSAD   95 (369)
T ss_dssp             EEEEECCSSCEEEEEECTTS-CEEEEEESSSCEEEEETTTCCEEEE-------ECCCSSCEEEEEECTTSS-EEEEEETT
T ss_pred             cEEEEEeeceEEEEEEcCCC-CEEEEEeCCCEEEEEeCCCchhhhh-------hhhcCCcEEEEEEcCCCC-EEEEEeCC
Confidence            34578999999999999988 8999999999999999998876554       456999999999999985 99999999


Q ss_pred             CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCce-----------eeeeeecCC
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD-----KKMRIINPRTGAI-----------EEEAVCHEG  301 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~-----------~~~~~~~~~  301 (490)
                      |.|++||+.+++.+..+. +...+.+++|+|+++++++++.+     +.|++||++....           ...+..+..
T Consensus        96 g~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (369)
T 3zwl_B           96 YSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEG  174 (369)
T ss_dssp             TEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTT
T ss_pred             CeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcC
Confidence            999999999999998888 88999999999999999999998     9999999987643           223333333


Q ss_pred             -CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        302 -SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       302 -~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                       ..+.+++|+|++++|++++   .++.|++||+++...... ....+...|.+++|+|++++| ++++.|+.|++||+.+
T Consensus       175 ~~~~~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~v~d~~~  249 (369)
T 3zwl_B          175 LDAATVAGWSTKGKYIIAGH---KDGKISKYDVSNNYEYVD-SIDLHEKSISDMQFSPDLTYF-ITSSRDTNSFLVDVST  249 (369)
T ss_dssp             CCCEEEEEECGGGCEEEEEE---TTSEEEEEETTTTTEEEE-EEECCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTT
T ss_pred             ccceeEEEEcCCCCEEEEEc---CCCEEEEEECCCCcEeEE-EEecCCCceeEEEECCCCCEE-EEecCCceEEEEECCC
Confidence             1499999999999999998   689999999987433222 223466789999999999998 7888999999999999


Q ss_pred             CCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc----------------eeEEEEecCCC
Q psy17682        381 EPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE----------------IGRFFRLNNSG  425 (490)
Q Consensus       381 ~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~----------------~~~~~~~~~~~  425 (490)
                      ++    .+..+.+..++..++|+|++.++++++.                .+++|++..+.
T Consensus       250 ~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~  306 (369)
T 3zwl_B          250 LQ----VLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE  306 (369)
T ss_dssp             CC----EEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred             Cc----eeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence            87    3444456778999999999999887743                56788887776

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=4.5e-31  Score=253.93  Aligned_cols=257  Identities=13%  Similarity=0.124  Sum_probs=203.1

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      ...+.+|.+.|.+++|+|++..+|++|+.||.|++||+.+++....+.     ..+|...|.+++|+|++..+|++++.|
T Consensus        66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~~~h~~~v~~~~~~~~~~~~l~s~~~d  140 (383)
T 3ei3_B           66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQ-----GMGPGDAITGMKFNQFNTNQLFVSSIR  140 (383)
T ss_dssp             EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEEC-----CCSTTCBEEEEEEETTEEEEEEEEETT
T ss_pred             EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeee-----cCCcCCceeEEEeCCCCCCEEEEEeCC
Confidence            446679999999999999876899999999999999998877654332     346999999999999433599999999


Q ss_pred             CcEEEEECCCCeeEEEEecC---CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc
Q psy17682        238 NNVAIWNVGTGEIMIQIECH---PDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL  314 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~  314 (490)
                      +.|++||++. +.+..+..+   ...|.+++|+|++++|++++.|+.|++||+ +++.+..+..|... +.+++|+|++.
T Consensus       141 ~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~-v~~~~~~~~~~  217 (383)
T 3ei3_B          141 GATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAK-VTHAEFNPRCD  217 (383)
T ss_dssp             TEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSC-EEEEEECSSCT
T ss_pred             CEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCc-EEEEEECCCCC
Confidence            9999999985 555555543   478999999999999999999999999999 57778888888875 99999999998


Q ss_pred             -EEEEEeCCCceeEEEEecCCCCCCC-eEEEeccCCCceeeeeecC-CCCeEEEEecCCCeEEEEEecCCCCeeEEeeee
Q psy17682        315 -IFTTGFSKMSERQYSLRAPDHLDEP-IVMVELDTSNGVMFPLYDP-DTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF  391 (490)
Q Consensus       315 -~l~~~~~~~~~~~i~iwd~~~~~~~-~~~~~~~~~~~i~~~~~s~-~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~  391 (490)
                       ++++++   .|+.|++||+++.... .......|...|.+++|+| ++++| ++++.|+.|++||+.+++.........
T Consensus       218 ~~l~s~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~  293 (383)
T 3ei3_B          218 WLMATSS---VDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKL-LTTDQRNEIRVYSSYDWSKPDQIIIHP  293 (383)
T ss_dssp             TEEEEEE---TTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEE-EEEESSSEEEEEETTBTTSCSEEEECC
T ss_pred             CEEEEEe---CCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEE-EEEcCCCcEEEEECCCCcccccccccc
Confidence             899988   6899999999974321 2333346778899999999 99998 788999999999999877433222110


Q ss_pred             ----eCC----------CceeeEEEeeCceeEEeecceeEEEEecCCCc
Q psy17682        392 ----QTP----------DPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGL  426 (490)
Q Consensus       392 ----~~~----------~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~~~  426 (490)
                          .+.          ..+..++|+|++.+..+.++.+++|++.+++.
T Consensus       294 ~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~  342 (383)
T 3ei3_B          294 HRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGL  342 (383)
T ss_dssp             BCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCE
T ss_pred             ccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCce
Confidence                111          23444666677666112256889999998873

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=2e-30  Score=252.54  Aligned_cols=268  Identities=20%  Similarity=0.263  Sum_probs=217.4

Q ss_pred             eeeeeccCCCC-CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeeccc
Q psy17682         24 RLTYFSPRTLT-EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVG  102 (490)
Q Consensus        24 ~~~~~~~~~~~-~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (490)
                      .+..|+..+.. ..+..+.+|...|++|+|+|++ .+|++|+.||+|+|||+.++..                 .....+
T Consensus       126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~~~~-----------------~~~~~~  187 (420)
T 4gga_A          126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKR-----------------LRNMTS  187 (420)
T ss_dssp             EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEE-----------------EEEECC
T ss_pred             EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCC-CEEEEEECCCeEEEEEcCCCcE-----------------EEEEeC
Confidence            46677776543 2344567899999999999999 8999999999999999988641                 111111


Q ss_pred             CCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEE
Q psy17682        103 GKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIA  182 (490)
Q Consensus       103 ~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~  182 (490)
                            +...+.++++++.       .+++++.++.+.+|+..    .   .......+.+|...+.++.|+|++ .+++
T Consensus       188 ------h~~~v~~~s~~~~-------~l~sgs~d~~i~~~d~~----~---~~~~~~~~~~h~~~~~~~~~~~~g-~~l~  246 (420)
T 4gga_A          188 ------HSARVGSLSWNSY-------ILSSGSRSGHIHHHDVR----V---AEHHVATLSGHSQEVCGLRWAPDG-RHLA  246 (420)
T ss_dssp             ------CSSCEEEEEEETT-------EEEEEETTSEEEEEETT----S---SSCEEEEEECCSSCEEEEEECTTS-SEEE
T ss_pred             ------CCCceEEEeeCCC-------EEEEEeCCCceeEeeec----c---cceeeEEecccccceeeeeecCCC-Ceee
Confidence                  1224556666554       67889999999999875    1   122456788999999999999998 8999


Q ss_pred             EEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEE--eCCCcEEEEECCCCeeEEEEecCCCc
Q psy17682        183 SGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTA--GSDNNVAIWNVGTGEIMIQIECHPDI  260 (490)
Q Consensus       183 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~--~~dg~v~iwd~~~~~~~~~~~~~~~~  260 (490)
                      +++.|+.+++|+..+++...   .+......|...|.+++|+|.+.++++++  +.|++|++||+.+++.+..+.. ...
T Consensus       247 s~~~D~~v~i~~~~~~~~~~---~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~-~~~  322 (420)
T 4gga_A          247 SGGNDNLVNVWPSAPGEGGW---VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA-HSQ  322 (420)
T ss_dssp             EEETTSCEEEEESSCCSSCS---CCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC-SSC
T ss_pred             eeeccccceEEeeccccccc---eeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc-ccc
Confidence            99999999999998776432   22334566999999999999988788765  4799999999999999988884 567


Q ss_pred             EEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC
Q psy17682        261 VYSASWNWDGSKLLTTC--KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE  338 (490)
Q Consensus       261 v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~  338 (490)
                      +.++.|+|+++.+++++  .|+.|++||+++++++.++.+|.+. |.+++|+|+|.+|++|+   .|++|++||+.....
T Consensus       323 v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~-V~~l~~spdg~~l~S~s---~D~tvriWdv~~~~~  398 (420)
T 4gga_A          323 VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR-VLSLTMSPDGATVASAA---ADETLRLWRCFELDP  398 (420)
T ss_dssp             EEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSCEEEEE---TTTEEEEECCSCSSC
T ss_pred             eeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCC-EEEEEEcCCCCEEEEEe---cCCeEEEEECCCCCc
Confidence            99999999999888876  6899999999999999999999885 99999999999999998   799999999986543

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.7e-30  Score=242.33  Aligned_cols=256  Identities=20%  Similarity=0.250  Sum_probs=210.3

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK  104 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (490)
                      +..|+.. .......+.+|...|.+++|+|++ .+|++++.|+.|++|++.....                         
T Consensus        41 v~vw~~~-~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~-------------------------   93 (313)
T 3odt_A           41 VRLWSKD-DQWLGTVVYTGQGFLNSVCYDSEK-ELLLFGGKDTMINGVPLFATSG-------------------------   93 (313)
T ss_dssp             EEEEEES-SSEEEEEEEECSSCEEEEEEETTT-TEEEEEETTSCEEEEETTCCTT-------------------------
T ss_pred             EEEEECC-CCEEEEEeecCCccEEEEEECCCC-CEEEEecCCCeEEEEEeeecCC-------------------------
Confidence            5556653 345667788999999999999999 8999999999999999876330                         


Q ss_pred             CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE
Q psy17682        105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG  184 (490)
Q Consensus       105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~  184 (490)
                                                                        ......+.+|...|.+++|.  + .+++++
T Consensus        94 --------------------------------------------------~~~~~~~~~~~~~i~~~~~~--~-~~l~~~  120 (313)
T 3odt_A           94 --------------------------------------------------EDPLYTLIGHQGNVCSLSFQ--D-GVVISG  120 (313)
T ss_dssp             --------------------------------------------------SCC-CEECCCSSCEEEEEEE--T-TEEEEE
T ss_pred             --------------------------------------------------CCcccchhhcccCEEEEEec--C-CEEEEE
Confidence                                                              00122456899999999994  4 799999


Q ss_pred             eCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEee-CCCCEEEEEeCCCcEEEEECCCCeeEEEEec-CCCcEE
Q psy17682        185 SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP-TAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-HPDIVY  262 (490)
Q Consensus       185 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~v~  262 (490)
                      +.||.|++||  .++.       ...+..|...+.++.|.| ++ .++++++.|+.|++||  .++....+.. |...+.
T Consensus       121 ~~d~~i~~~d--~~~~-------~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~  188 (313)
T 3odt_A          121 SWDKTAKVWK--EGSL-------VYNLQAHNASVWDAKVVSFSE-NKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVR  188 (313)
T ss_dssp             ETTSEEEEEE--TTEE-------EEEEECCSSCEEEEEEEETTT-TEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEE
T ss_pred             eCCCCEEEEc--CCcE-------EEecccCCCceeEEEEccCCC-CEEEEEECCCCEEEEe--cCceEEEEeccCcccEE
Confidence            9999999999  3322       233556999999999999 55 5999999999999999  4566777776 899999


Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE
Q psy17682        263 SASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM  342 (490)
Q Consensus       263 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~  342 (490)
                      +++|+|++. +++++.||.|++||+++++.+..+..|... +.+++|+|++. +++++   .++.|++||+++.+....+
T Consensus       189 ~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~-l~~~~---~dg~v~iwd~~~~~~~~~~  262 (313)
T 3odt_A          189 HLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESF-VYCIKLLPNGD-IVSCG---EDRTVRIWSKENGSLKQVI  262 (313)
T ss_dssp             EEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSC-EEEEEECTTSC-EEEEE---TTSEEEEECTTTCCEEEEE
T ss_pred             EEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCce-EEEEEEecCCC-EEEEe---cCCEEEEEECCCCceeEEE
Confidence            999999988 999999999999999999999999888775 99999999995 66666   6899999999987643332


Q ss_pred             EeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        343 VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       343 ~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                        ..+...+.+++|+|++++  ++++.||.|++||+.+++
T Consensus       263 --~~~~~~i~~~~~~~~~~~--~~~~~dg~i~iw~~~~~~  298 (313)
T 3odt_A          263 --TLPAISIWSVDCMSNGDI--IVGSSDNLVRIFSQEKSR  298 (313)
T ss_dssp             --ECSSSCEEEEEECTTSCE--EEEETTSCEEEEESCGGG
T ss_pred             --eccCceEEEEEEccCCCE--EEEeCCCcEEEEeCCCCc
Confidence              245568999999999984  468899999999999876

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=7.6e-31  Score=249.32  Aligned_cols=286  Identities=10%  Similarity=0.069  Sum_probs=203.9

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      .++..+.+|.+.|++++|+|++ .+|++|+.|+ ++||++..+..                 .... ..       ..+.
T Consensus        10 ~~~~~~~~h~~~V~~v~fs~dg-~~la~g~~~~-~~iw~~~~~~~-----------------~~~~-~~-------~~~~   62 (355)
T 3vu4_A           10 NPIVPENHVSNPVTDYEFNQDQ-SCLILSTLKS-FEIYNVHPVAH-----------------IMSQ-EM-------RHLS   62 (355)
T ss_dssp             ---------CCCCCEEEECTTS-SEEEEECSSE-EEEEEETTEEE-----------------EEEE-EC-------SCCC
T ss_pred             CCccccccCCCceEEEEECCCC-CEEEEEcCCE-EEEEecCCcce-----------------eeee-ec-------CCeE
Confidence            4555679999999999999999 7888888765 68999876431                 0000 00       0244


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                      .+++.++.    ...+.+++.++.+++|+..     .++   .+..+. |...|.+++|+++   .++++. |+.|++||
T Consensus        63 ~~~~~~~~----~~~~~~~~~d~~v~iWd~~-----~~~---~~~~~~-~~~~v~~v~~~~~---~~~~~~-~~~i~i~d  125 (355)
T 3vu4_A           63 KVRMLHRT----NYVAFVTGVKEVVHIWDDV-----KKQ---DVSRIK-VDAPVKDLFLSRE---FIVVSY-GDVISVFK  125 (355)
T ss_dssp             EEEECTTS----SEEEEECSSTTEEEEEETT-----TTE---EEEEEE-CSSCEEEEEECSS---EEEEEE-TTEEEEEE
T ss_pred             EEEEcCCC----CEEEEEECCccEEEEEECC-----CCc---EEEEEE-CCCceEEEEEcCC---EEEEEE-cCEEEEEE
Confidence            55665543    1234567778999999985     222   233443 6779999999974   344443 78999999


Q ss_pred             CCCC-CcccccccceeeecccccCEEEEEEeeCCCCEEEE--EeCCCcEEEEECCCCe---------------e-EEEEe
Q psy17682        195 IPDG-GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLT--AGSDNNVAIWNVGTGE---------------I-MIQIE  255 (490)
Q Consensus       195 ~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s--~~~dg~v~iwd~~~~~---------------~-~~~~~  255 (490)
                      +.++ +.+..+..          ....+++++  . +++.  |+.||.|++||+++++               + +..+.
T Consensus       126 ~~~~~~~~~~~~~----------~~~~~~~s~--~-~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~  192 (355)
T 3vu4_A          126 FGNPWKRITDDIR----------FGGVCEFSN--G-LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK  192 (355)
T ss_dssp             SSTTCCBSSCCEE----------EEEEEEEET--T-EEEEEESSCTTCEEEEECCC------------------CCEEEC
T ss_pred             CCCCceeeEEecc----------CCceEEEEc--c-EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE
Confidence            9887 55554321          344556666  2 5555  5889999999998765               2 67788


Q ss_pred             cCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEeCCCCceeeeee-e-cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEec
Q psy17682        256 CHPDIVYSASWNWDGSKLLTTCKDKK-MRIINPRTGAIEEEAV-C-HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRA  332 (490)
Q Consensus       256 ~~~~~v~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~-~-~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd  332 (490)
                      +|...|.+++|+|++++|++++.|++ |++||+++++++.++. + |.. .+.+++|+|+|++|++++   .|+.|++||
T Consensus       193 ~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~-~v~~~~~s~~~~~l~s~s---~d~~v~iw~  268 (355)
T 3vu4_A          193 AHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRA-DVVDMKWSTDGSKLAVVS---DKWTLHVFE  268 (355)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCS-CEEEEEECTTSCEEEEEE---TTCEEEEEE
T ss_pred             ccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC-cEEEEEECCCCCEEEEEE---CCCEEEEEE
Confidence            99999999999999999999999998 9999999999999998 4 665 499999999999999998   689999999


Q ss_pred             CCCCCCCeEEE-------------------ecc--CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        333 PDHLDEPIVMV-------------------ELD--TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       333 ~~~~~~~~~~~-------------------~~~--~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      ++.........                   ...  .......++|+++++.| ++++.||.+++|++..++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l-~~~~~dg~~~~~~~~~~~  338 (355)
T 3vu4_A          269 IFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLV-VVWPHTRMIETFKVVFDD  338 (355)
T ss_dssp             SSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEE-EEETTTTEEEEEEEEEET
T ss_pred             ccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEE-EEEeCCCeEEEEEEEcCC
Confidence            97643211100                   011  11223678999999998 788899999999998754

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=6.5e-31  Score=251.46  Aligned_cols=249  Identities=11%  Similarity=0.107  Sum_probs=202.2

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCc
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNN  239 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~  239 (490)
                      .+..|.++|.+++|+|++ ++|++|+.|+.|++||+.+++.     .....+.+|...|.+++|+|++. +|++++.|+.
T Consensus         3 ~~~~~~~~i~~~~~s~~~-~~l~~~~~d~~v~i~~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~dg~   75 (372)
T 1k8k_C            3 YHSFLVEPISCHAWNKDR-TQIAICPNNHEVHIYEKSGNKW-----VQVHELKEHNGQVTGVDWAPDSN-RIVTCGTDRN   75 (372)
T ss_dssp             EEESCSSCCCEEEECTTS-SEEEEECSSSEEEEEEEETTEE-----EEEEEEECCSSCEEEEEEETTTT-EEEEEETTSC
T ss_pred             eecccCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCCCCcE-----EeeeeecCCCCcccEEEEeCCCC-EEEEEcCCCe
Confidence            345699999999999998 8999999999999999987651     12233557999999999999985 9999999999


Q ss_pred             EEEEECCCCeeEEEE--ecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce---eeee-eecCCCceeEEEEeCCC
Q psy17682        240 VAIWNVGTGEIMIQI--ECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI---EEEA-VCHEGSKATRAIYLKSG  313 (490)
Q Consensus       240 v~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~-~~~~~~~~~~~~~s~~~  313 (490)
                      |++||+++++....+  ..|...|.+++|+|++++|++++.|+.|++||++.++.   ...+ ..|.. .+.+++|+|++
T Consensus        76 i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~  154 (372)
T 1k8k_C           76 AYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS-TVLSLDWHPNS  154 (372)
T ss_dssp             EEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS-CEEEEEECTTS
T ss_pred             EEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCC-CeeEEEEcCCC
Confidence            999999888755444  56889999999999999999999999999999998763   2333 24444 49999999999


Q ss_pred             cEEEEEeCCCceeEEEEecCCCC----------------CCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEE
Q psy17682        314 LIFTTGFSKMSERQYSLRAPDHL----------------DEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFE  377 (490)
Q Consensus       314 ~~l~~~~~~~~~~~i~iwd~~~~----------------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd  377 (490)
                      .+|++++   .++.|++||++..                ..........|...+.+++|+|++++| ++++.|+.|++||
T Consensus       155 ~~l~~~~---~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~d  230 (372)
T 1k8k_C          155 VLLAAGS---CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRV-AWVSHDSTVCLAD  230 (372)
T ss_dssp             SEEEEEE---TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEE-EEEETTTEEEEEE
T ss_pred             CEEEEEc---CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEE-EEEeCCCEEEEEE
Confidence            9999998   6899999997521                111122222566789999999999988 7889999999999


Q ss_pred             ecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-cceeEEEEecC
Q psy17682        378 ITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-CEIGRFFRLNN  423 (490)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~~~~~~~  423 (490)
                      +.+++.. ..+.  .+..++.+++|+|++.+++++ ++.+++|++..
T Consensus       231 ~~~~~~~-~~~~--~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~  274 (372)
T 1k8k_C          231 ADKKMAV-ATLA--SETLPLLAVTFITESSLVAAGHDCFPVLFTYDS  274 (372)
T ss_dssp             GGGTTEE-EEEE--CSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred             CCCCcee-EEEc--cCCCCeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence            9998732 2222  344689999999999988887 45889999988

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=7.1e-32  Score=260.12  Aligned_cols=250  Identities=10%  Similarity=-0.000  Sum_probs=175.4

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEee--------CCCCEEEEE
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP--------TAQNVLLTA  234 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p--------~~~~~l~s~  234 (490)
                      .|...+....+.+++ .+|++|+.|++|+|||+++++....  .+...+.+|.+.|.+++|+|        ++ ++|++|
T Consensus        87 ~~~~~~~~~~~~~~~-~~las~~~d~~v~lw~~~~~~~~~~--~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~-~~las~  162 (393)
T 4gq1_A           87 LHDGDGNVNSSPVYS-LFLACVCQDNTVRLIITKNETIITQ--HVLGGKSGHHNFVNDIDIADVYSADNRLAE-QVIASV  162 (393)
T ss_dssp             ----------CCEEE-EEEEEEETTSCEEEEEEETTEEEEE--EEECTTTSCSSCEEEEEEEEEECTTCSEEE-EEEEEE
T ss_pred             ccCCCcceeecCCCC-CEEEEEeCCCcEEEEECCCCcccee--eeecccCCCCCceEEEEEccccccccCCCC-CEEEEE
Confidence            455555555566655 8999999999999999987754332  22334678999999999998        66 499999


Q ss_pred             eCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeeeee----------------
Q psy17682        235 GSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG-SKLLTTCKDKKMRIINPRTGAIEEEAV----------------  297 (490)
Q Consensus       235 ~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~----------------  297 (490)
                      +.|++|+|||++++.++..+..|...+.+++|+|++ .+|++++.|++|++||+++++......                
T Consensus       163 s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~  242 (393)
T 4gq1_A          163 GDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTL  242 (393)
T ss_dssp             ETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESG
T ss_pred             ECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccc
Confidence            999999999999888888888899999999999987 489999999999999999876443221                


Q ss_pred             ---------ecCCCceeEEEEe-CCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe----------------ccCCCce
Q psy17682        298 ---------CHEGSKATRAIYL-KSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE----------------LDTSNGV  351 (490)
Q Consensus       298 ---------~~~~~~~~~~~~s-~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~----------------~~~~~~i  351 (490)
                               +|.. .+.++.|+ ++++.+++++   .++.+++||+........+..                .......
T Consensus       243 ~~~~~~~~~~~~~-~v~~v~~~~~dg~~l~s~s---~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  318 (393)
T 4gq1_A          243 PLVNTCHSSGIAS-SLANVRWIGSDGSGILAMC---KSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSL  318 (393)
T ss_dssp             GGC------CCSS-SCSEEEEETTTTCEEEEEC---TTSEEEEEEC-------------------CCSCSEEEECSSCCS
T ss_pred             cceeeeecccccc-cceeeeeecCCCCEEEEEe---CCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcc
Confidence                     2333 36777776 7899999998   789999999986543222111                0111112


Q ss_pred             eeeeec-CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc-eeEEEEecC
Q psy17682        352 MFPLYD-PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE-IGRFFRLNN  423 (490)
Q Consensus       352 ~~~~~s-~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-~~~~~~~~~  423 (490)
                      ....|+ +.++.++++|+.||.|++||+.+++.....   ..+..+|++++|+|||++|+++++ .+.+|++..
T Consensus       319 ~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~---~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~g  389 (393)
T 4gq1_A          319 LGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIP---IQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLMG  389 (393)
T ss_dssp             SCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEE---EECSSCEEEEEECTTSSEEEEEESSEEEEEEEGG
T ss_pred             eeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEe---cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEeC
Confidence            223333 345555588999999999999998754332   356679999999999999888854 556777654

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3e-31  Score=251.09  Aligned_cols=279  Identities=10%  Similarity=0.003  Sum_probs=206.3

Q ss_pred             EEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEE
Q psy17682         50 VLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEE  129 (490)
Q Consensus        50 v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~  129 (490)
                      ..+.+++ .+|+||+.||+|++||+.++....                  .+.       ...+..+.++|.        
T Consensus        42 ~~~~~d~-~~l~sg~~Dg~v~iwd~~~~~~~~------------------~~~-------~~~v~~~~~~~~--------   87 (343)
T 3lrv_A           42 KSMYYDK-WVCMCRCEDGALHFTQLKDSKTIT------------------TIT-------TPNPRTGGEHPA--------   87 (343)
T ss_dssp             SSSSEEE-EEEEEEEETTEEEEEEESSSSCEE------------------EEE-------EECCCTTCCCCS--------
T ss_pred             hhhcCCC-CEEEEECCCCcEEEEECCCCcEEE------------------EEe-------cCCceeeeeCCc--------
Confidence            3445566 899999999999999998865211                  000       124566677765        


Q ss_pred             EEeeCCCceEEEECCCCCCCC-cccCCCCccee-ecccCCeeEEEECC--CCCCEEEEEeCCCcEEEEECCCCCcccccc
Q psy17682        130 IRKLKSQQALSILPPPSTAPN-TGRINADHALV-GGHKGPVLDIAWSP--HDDNVIASGSEDCVVKVWQIPDGGISRTLT  205 (490)
Q Consensus       130 ~~~~~~~g~i~v~~~~~~~~~-~~~~~~~~~~~-~~h~~~V~~~~~~p--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  205 (490)
                      +++++.++.+++|+....... .......+..+ .+|.+.|.+++|+|  ++ .++++|+.||+|++||+++++......
T Consensus        88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~~~~~~  166 (343)
T 3lrv_A           88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDSQYIVHS  166 (343)
T ss_dssp             EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSCEEEEEC
T ss_pred             eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCcEEEEEe
Confidence            677899999999977521000 00011112222 36778999999999  88 899999999999999999887644321


Q ss_pred             cceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeE-EEEec-CCCcEEEEEEcCCCCEEEEEeCCCeEE
Q psy17682        206 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIM-IQIEC-HPDIVYSASWNWDGSKLLTTCKDKKMR  283 (490)
Q Consensus       206 ~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~  283 (490)
                            ..|...+.+++|+|++. +|++|+.||.|++||+++++.+ ..+.. |...|.+++|+|++.+|++++ ++.|+
T Consensus       167 ------~~~~~~i~~~~~~pdg~-~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~  238 (343)
T 3lrv_A          167 ------AKSDVEYSSGVLHKDSL-LLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVV  238 (343)
T ss_dssp             ------CCSSCCCCEEEECTTSC-EEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEE
T ss_pred             ------cCCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEE
Confidence                  22566799999999995 9999999999999999999877 78887 999999999999999999999 55999


Q ss_pred             EEeCCCCceeeeeee---cCCCce--eEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecC
Q psy17682        284 IINPRTGAIEEEAVC---HEGSKA--TRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDP  358 (490)
Q Consensus       284 iwd~~~~~~~~~~~~---~~~~~~--~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~  358 (490)
                      +||+++++....+..   +.. .+  .+++|+|+|++|++++.  .++.+++|++.........      ..+..+.|++
T Consensus       239 iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~s~--~d~~i~v~~~~~~~~~~~~------~~~~~~~~~~  309 (343)
T 3lrv_A          239 CFDLRKDVGTLAYPTYTIPEF-KTGTVTYDIDDSGKNMIAYSN--ESNSLTIYKFDKKTKNWTK------DEESALCLQS  309 (343)
T ss_dssp             EEETTSSTTCBSSCCCBC------CCEEEEECTTSSEEEEEET--TTTEEEEEEECTTTCSEEE------EEEEECCC--
T ss_pred             EEEcCCCCcceeecccccccc-cccceEEEECCCCCEEEEecC--CCCcEEEEEEcccccceEe------cCceeEecCc
Confidence            999999877655543   222 12  36999999999999872  2788999999765543322      4567888888


Q ss_pred             ---CCCeEEEEecCCCeEEEEEecCC
Q psy17682        359 ---DTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       359 ---~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                         +.+.+ ++++.|+.+.++-....
T Consensus       310 ~~~~~~~l-~~~~~d~~~~~~~~~~~  334 (343)
T 3lrv_A          310 DTADFTDM-DVVCGDGGIAAILKTND  334 (343)
T ss_dssp             --CCCCEE-EEEEETTEEEEEEECSS
T ss_pred             ccccccee-EEEecCCceEEEEecCC
Confidence               88888 67888999988765443

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=3.5e-30  Score=251.85  Aligned_cols=291  Identities=10%  Similarity=0.096  Sum_probs=224.5

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      +..+..| ..+.+++|+|++ .++++++.|+.|++||+.+++..                  .                 
T Consensus       116 ~~~~~~~-~~~~~~~~s~~~-~~~~~~~~~~~i~~~d~~~g~~~------------------~-----------------  158 (433)
T 3bws_A          116 ISRFKTG-FQPKSVRFIDNT-RLAIPLLEDEGMDVLDINSGQTV------------------R-----------------  158 (433)
T ss_dssp             EEEEECS-SCBCCCEESSSS-EEEEEBTTSSSEEEEETTTCCEE------------------E-----------------
T ss_pred             EEEEcCC-CCceEEEEeCCC-eEEEEeCCCCeEEEEECCCCeEe------------------e-----------------
Confidence            3334444 456689999944 88888888999999998875410                  0                 


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP  196 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~  196 (490)
                                              ..              ....+.+|.+.|.+++|+|++ .++++++.|+.|++||++
T Consensus       159 ------------------------~~--------------~~~~~~~~~~~v~~~~~~~~~-~~~~s~~~d~~v~~~d~~  199 (433)
T 3bws_A          159 ------------------------LS--------------PPEKYKKKLGFVETISIPEHN-ELWVSQMQANAVHVFDLK  199 (433)
T ss_dssp             ------------------------EC--------------CCHHHHTTCCEEEEEEEGGGT-EEEEEEGGGTEEEEEETT
T ss_pred             ------------------------ec--------------CcccccccCCceeEEEEcCCC-EEEEEECCCCEEEEEECC
Confidence                                    00              011245789999999999987 899999999999999998


Q ss_pred             CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEE
Q psy17682        197 DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTT  276 (490)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  276 (490)
                      +++....+       ..|...+.+++|+|+++.++++++.|+.|++||+++++.+..+.. ...+.+++|+|+++.++++
T Consensus       200 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~  271 (433)
T 3bws_A          200 TLAYKATV-------DLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIA  271 (433)
T ss_dssp             TCCEEEEE-------ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEECTTSSEEEEE
T ss_pred             CceEEEEE-------cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEcCCCCEEEEE
Confidence            87765543       358889999999999974446666899999999999998888774 4569999999999999988


Q ss_pred             e--------CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEE-EEEeCCCceeEEEEecCCCCCCCeEEEeccC
Q psy17682        277 C--------KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIF-TTGFSKMSERQYSLRAPDHLDEPIVMVELDT  347 (490)
Q Consensus       277 ~--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l-~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~  347 (490)
                      +        .|+.|++||+++++....+. +.. .+..++|+|+++.+ ++++   .++.+++||+.+.+.   .....+
T Consensus       272 ~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~-~~~~~~~~~~g~~l~~~~~---~~~~v~v~d~~~~~~---~~~~~~  343 (433)
T 3bws_A          272 QFSASNQESGGGRLGIYSMDKEKLIDTIG-PPG-NKRHIVSGNTENKIYVSDM---CCSKIEVYDLKEKKV---QKSIPV  343 (433)
T ss_dssp             EEESCTTCSCCEEEEEEETTTTEEEEEEE-EEE-CEEEEEECSSTTEEEEEET---TTTEEEEEETTTTEE---EEEEEC
T ss_pred             ECCCCccccCCCeEEEEECCCCcEEeecc-CCC-CcceEEECCCCCEEEEEec---CCCEEEEEECCCCcE---EEEecC
Confidence            8        48899999999988776654 333 38899999999754 5555   688999999987542   333445


Q ss_pred             CCceeeeeecCCCCeEEEEecC--------------CCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-
Q psy17682        348 SNGVMFPLYDPDTNLVYLCGKG--------------DSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-  412 (490)
Q Consensus       348 ~~~i~~~~~s~~~~~l~~~g~~--------------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-  412 (490)
                      ...+..++|+|+|+++++++..              ||.|++||+.+++    .+..+.....+.+++|+|++.+++++ 
T Consensus       344 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~----~~~~~~~~~~~~~~~~s~dg~~l~~~~  419 (433)
T 3bws_A          344 FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT----VKEFWEAGNQPTGLDVSPDNRYLVISD  419 (433)
T ss_dssp             SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE----EEEEEECSSSEEEEEECTTSCEEEEEE
T ss_pred             CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc----EEEEecCCCCCceEEEcCCCCEEEEEE
Confidence            6779999999999998655443              5799999999876    33344455689999999999887654 


Q ss_pred             --cceeEEEEecC
Q psy17682        413 --CEIGRFFRLNN  423 (490)
Q Consensus       413 --~~~~~~~~~~~  423 (490)
                        ++.+++|++..
T Consensus       420 ~~d~~i~v~~~~~  432 (433)
T 3bws_A          420 FLDHQIRVYRRDG  432 (433)
T ss_dssp             TTTTEEEEEEETT
T ss_pred             CCCCeEEEEEecC
Confidence              45888998763

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=3.1e-31  Score=260.44  Aligned_cols=297  Identities=11%  Similarity=0.193  Sum_probs=205.7

Q ss_pred             cEEeccccc------------ceeeeEEeccCCC-ceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeeccc
Q psy17682         36 PVVDLLYHQ------------RRVGLVLWHPTAQ-NVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVG  102 (490)
Q Consensus        36 ~~~~l~gH~------------~~V~~v~~~p~~~-~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (490)
                      ....+.+|.            +.|++++|+|+++ .+|++++.|++|++||+..+.....     ....         ..
T Consensus        73 ~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~-----~~~~---------~~  138 (447)
T 3dw8_B           73 VYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPE-----GYNL---------KE  138 (447)
T ss_dssp             EEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEE-----CCSC---------C-
T ss_pred             EecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcc-----eecc---------cC
Confidence            577899998            8899999999975 5899999999999999876431000     0000         00


Q ss_pred             CCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEE
Q psy17682        103 GKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIA  182 (490)
Q Consensus       103 ~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~  182 (490)
                      ..+.......+..+.+..-     ..       .+ .. ...          ........+|...|.+++|+|++ .+|+
T Consensus       139 ~~g~~~~~~~~~~~~~~~~-----~~-------~~-~~-~~~----------~~~~~~~~~h~~~v~~~~~~~~~-~~l~  193 (447)
T 3dw8_B          139 EDGRYRDPTTVTTLRVPVF-----RP-------MD-LM-VEA----------SPRRIFANAHTYHINSISINSDY-ETYL  193 (447)
T ss_dssp             -------CCCCCSCCCCEE-----EE-------EE-EE-EEE----------EEEEEECSCCSSCCCEEEECTTS-SEEE
T ss_pred             ccccccCcccccceEeccc-----cc-------hh-ee-eec----------cceEEeccCCCcceEEEEEcCCC-CEEE
Confidence            0000000001111111100     00       00 00 000          00011235899999999999988 8999


Q ss_pred             EEeCCCcEEEEECCC-CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee----EEEEecC
Q psy17682        183 SGSEDCVVKVWQIPD-GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI----MIQIECH  257 (490)
Q Consensus       183 s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~----~~~~~~~  257 (490)
                      +| .|+.|++||+++ ++....+......+.+|...|.+++|+|++.++|++|+.||.|++||+++++.    +..+..|
T Consensus       194 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  272 (447)
T 3dw8_B          194 SA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEP  272 (447)
T ss_dssp             EE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC
T ss_pred             Ee-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccC
Confidence            98 799999999984 33322221111135579999999999999845999999999999999999886    7888877


Q ss_pred             CC------------cEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-CceeeeeeecCCCc--------------eeEEEEe
Q psy17682        258 PD------------IVYSASWNWDGSKLLTTCKDKKMRIINPRT-GAIEEEAVCHEGSK--------------ATRAIYL  310 (490)
Q Consensus       258 ~~------------~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~--------------~~~~~~s  310 (490)
                      ..            .|.+++|+|++++|++++. +.|++||+++ ++++..+..|....              +..++|+
T Consensus       273 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s  351 (447)
T 3dw8_B          273 EDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWN  351 (447)
T ss_dssp             -----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEEC
T ss_pred             CCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEEC
Confidence            75            8999999999999999999 9999999997 88888888775310              2248999


Q ss_pred             CCCcEEEEEeCCCceeEEEEecCCCCCCCeEEE-------------------------------eccCCCceeeeeecCC
Q psy17682        311 KSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMV-------------------------------ELDTSNGVMFPLYDPD  359 (490)
Q Consensus       311 ~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~-------------------------------~~~~~~~i~~~~~s~~  359 (490)
                      |++.+|++|+   .|+.|++||+.+++.. .+.                               .......|..++|+|+
T Consensus       352 ~~~~~l~s~s---~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~  427 (447)
T 3dw8_B          352 GSDSVVMTGS---YNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPK  427 (447)
T ss_dssp             TTSSEEEEEC---STTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSS
T ss_pred             CCCCEEEEec---cCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCC
Confidence            9999999998   7899999999876532 111                               1123346888999999


Q ss_pred             CCeEEEEecCCCeEEEEEec
Q psy17682        360 TNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       360 ~~~l~~~g~~dg~i~iwd~~  379 (490)
                      +++| ++++.++ +++|..+
T Consensus       428 ~~~l-a~~~~~~-~~~~~~~  445 (447)
T 3dw8_B          428 ENII-AVATTNN-LYIFQDK  445 (447)
T ss_dssp             SSEE-EEECSSC-EEEEECC
T ss_pred             CCEE-EEEecce-eeeeccc
Confidence            9998 6676665 7788643

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=1.2e-30  Score=254.92  Aligned_cols=260  Identities=15%  Similarity=0.233  Sum_probs=206.0

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc---cccceeeecccccCEEEEEEeeCCCCEEEEEeC
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT---LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS  236 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~  236 (490)
                      ...+|.+.|++++|+|+++.+|++++.||.|++|++.+......   ...+...+.+|...|.+++|+|++..+|++|+.
T Consensus       123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~  202 (430)
T 2xyi_A          123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD  202 (430)
T ss_dssp             EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred             EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence            44689999999999998558999999999999999975211000   013344567799999999999998669999999


Q ss_pred             CCcEEEEECCCCee-------EEEEecCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCC---ceeeeeeecCCCcee
Q psy17682        237 DNNVAIWNVGTGEI-------MIQIECHPDIVYSASWNW-DGSKLLTTCKDKKMRIINPRTG---AIEEEAVCHEGSKAT  305 (490)
Q Consensus       237 dg~v~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~  305 (490)
                      ||.|++||+..+..       ...+..|...|.+++|+| ++.+|++++.||.|++||++++   +.+..+..|... +.
T Consensus       203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-v~  281 (430)
T 2xyi_A          203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE-VN  281 (430)
T ss_dssp             TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC-EE
T ss_pred             CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC-eE
Confidence            99999999987321       456678999999999999 6789999999999999999987   566677777765 99


Q ss_pred             EEEEeCCCc-EEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682        306 RAIYLKSGL-IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF  384 (490)
Q Consensus       306 ~~~~s~~~~-~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~  384 (490)
                      +++|+|++. ++++|+   .++.|++||++....+..... .|...|.+++|+|+++.++++++.|+.|++||+......
T Consensus       282 ~i~~~p~~~~~l~tg~---~dg~v~vwd~~~~~~~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~  357 (430)
T 2xyi_A          282 CLSFNPYSEFILATGS---ADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE  357 (430)
T ss_dssp             EEEECSSCTTEEEEEE---TTSEEEEEETTCTTSCSEEEE-CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred             EEEeCCCCCCEEEEEe---CCCeEEEEeCCCCCCCeEEee-cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence            999999987 688888   689999999998555444333 467889999999999877689999999999999873210


Q ss_pred             ----------eEEeeee-eCCCceeeEEEeeCce-eEEee--cceeEEEEecCC
Q psy17682        385 ----------VHYINTF-QTPDPQRGIGMMPKRG-CDVNS--CEIGRFFRLNNS  424 (490)
Q Consensus       385 ----------~~~~~~~-~~~~~i~~~~~sp~~~-~l~~~--~~~~~~~~~~~~  424 (490)
                                ...+..+ .+...|++++|+|++. +++++  ++.+++|++...
T Consensus       358 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~  411 (430)
T 2xyi_A          358 QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN  411 (430)
T ss_dssp             CCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred             cCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence                      0122222 3456899999999998 66665  457899998764

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.98  E-value=1.4e-30  Score=246.17  Aligned_cols=249  Identities=12%  Similarity=0.062  Sum_probs=203.9

Q ss_pred             eecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCC-EEEEEeCCCc
Q psy17682        161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQN-VLLTAGSDNN  239 (490)
Q Consensus       161 ~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s~~~dg~  239 (490)
                      ..+|.+.|.+++|+|++ .+|++++.||.|++|++.+++....    .....+|...|.+++|+|++ . +|++|+.||.
T Consensus         7 ~~~h~~~v~~~~~s~~~-~~l~~~~~d~~v~iw~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~   80 (342)
T 1yfq_A            7 EQAPKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDIQAKNVD----LLQSLRYKHPLLCCNFIDNT-DLQIYVGTVQGE   80 (342)
T ss_dssp             SSCCSSCEEEEEEEGGG-TEEEEEETTSEEEEEEEETTTTEEE----EEEEEECSSCEEEEEEEESS-SEEEEEEETTSC
T ss_pred             ccCCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEeCCCCcccc----ceeeeecCCceEEEEECCCC-CcEEEEEcCCCe
Confidence            45899999999999988 8999999999999999987762111    12244699999999999997 6 8999999999


Q ss_pred             EEEEEC-CCCeeEEEEec--CCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC---------CceeeeeeecCCCceeEE
Q psy17682        240 VAIWNV-GTGEIMIQIEC--HPDIVYSASWNWDGSKLLTTCKDKKMRIINPRT---------GAIEEEAVCHEGSKATRA  307 (490)
Q Consensus       240 v~iwd~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~~~~~~  307 (490)
                      |++||+ .+++. ..+..  |...|.+++|+| ++.|++++.|+.|++||+++         ++++..+. +.. .+.++
T Consensus        81 i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~-~v~~~  156 (342)
T 1yfq_A           81 ILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKN-KIFTM  156 (342)
T ss_dssp             EEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCC-CEEEE
T ss_pred             EEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCC-ceEEE
Confidence            999999 77754 67778  999999999999 99999999999999999987         76666665 544 49999


Q ss_pred             EEeCCCcEEEEEeCCCceeEEEEecCCC-CCCCeEEEeccCCCceeeeeecC-CCCeEEEEecCCCeEEEEEecCC----
Q psy17682        308 IYLKSGLIFTTGFSKMSERQYSLRAPDH-LDEPIVMVELDTSNGVMFPLYDP-DTNLVYLCGKGDSVIRYFEITAE----  381 (490)
Q Consensus       308 ~~s~~~~~l~~~~~~~~~~~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~g~~dg~i~iwd~~~~----  381 (490)
                      +|+|++  +++++   .++.|++||++. ...........+...+.+++|+| +++++ ++++.||.|++|++...    
T Consensus       157 ~~~~~~--l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l-~~~~~dg~i~i~~~~~~~~~~  230 (342)
T 1yfq_A          157 DTNSSR--LIVGM---NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGY-ACSSIDGRVAVEFFDDQGDDY  230 (342)
T ss_dssp             EECSSE--EEEEE---STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEE-EEEETTSEEEEEECCTTCCST
T ss_pred             EecCCc--EEEEe---CCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEE-EEEecCCcEEEEEEcCCCccc
Confidence            999988  66666   688999999998 66555556667778899999999 99988 78889999999999876    


Q ss_pred             -CCeeEEeeeee-------CCCceeeEEEeeCceeEEeec--ceeEEEEecCCC
Q psy17682        382 -PPFVHYINTFQ-------TPDPQRGIGMMPKRGCDVNSC--EIGRFFRLNNSG  425 (490)
Q Consensus       382 -~~~~~~~~~~~-------~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~~~~  425 (490)
                       ......+....       +..+|.+++|+|++.++++++  +.+++|++.+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~  284 (342)
T 1yfq_A          231 NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK  284 (342)
T ss_dssp             TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred             ccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh
Confidence             12222332221       123899999999999888774  478999998876

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.98  E-value=1.3e-30  Score=255.43  Aligned_cols=259  Identities=12%  Similarity=0.125  Sum_probs=200.1

Q ss_pred             Cccee-ecccCCeeEEEECC-CCCCEEEEEeCCCcEEEEECCC---CCcccccccceeeecccccCEEEEEEeeCCCCEE
Q psy17682        157 DHALV-GGHKGPVLDIAWSP-HDDNVIASGSEDCVVKVWQIPD---GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVL  231 (490)
Q Consensus       157 ~~~~~-~~h~~~V~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l  231 (490)
                      .+..+ .+|.+.|++++|+| ++ .+|++|+.||+|++||+.+   +....    +...+ .|...|.+++|+|++. +|
T Consensus        54 ~~~~~~~~h~~~V~~~~~s~~~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~----~~~~~-~h~~~v~~~~~~~~~~-~l  126 (437)
T 3gre_A           54 LIATLMENEPNSITSSAVSPGET-PYLITGSDQGVIKIWNLKEIIVGEVYS----SSLTY-DCSSTVTQITMIPNFD-AF  126 (437)
T ss_dssp             EEEEECTTTTSCEEEEEEECSSS-CEEEEEETTSEEEEEEHHHHHTTCCCS----CSEEE-ECSSCEEEEEECTTSS-EE
T ss_pred             EEeeeccCCCCceEEEEECCCCC-CEEEEecCCceEEEeECcccccCcccc----eeeec-cCCCCEEEEEEeCCCC-EE
Confidence            34456 78999999999999 77 8999999999999999876   33211    11112 4899999999999985 99


Q ss_pred             EEEeCCCcEEEEECC---CCeeEEEEe----------c--CCCcEEEEE--EcCCCCEEEEEeCCCeEEEEeCCCCceee
Q psy17682        232 LTAGSDNNVAIWNVG---TGEIMIQIE----------C--HPDIVYSAS--WNWDGSKLLTTCKDKKMRIINPRTGAIEE  294 (490)
Q Consensus       232 ~s~~~dg~v~iwd~~---~~~~~~~~~----------~--~~~~v~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  294 (490)
                      ++|+.||.|++||+.   +++.+..+.          .  +...+.++.  +++++++|++++.|+.|++||+++++++.
T Consensus       127 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~  206 (437)
T 3gre_A          127 AVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQ  206 (437)
T ss_dssp             EEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEE
T ss_pred             EEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeE
Confidence            999999999999994   454443332          1  456677776  56789999999999999999999999999


Q ss_pred             eeee--cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeee----ecCCCCeEEEEec
Q psy17682        295 EAVC--HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPL----YDPDTNLVYLCGK  368 (490)
Q Consensus       295 ~~~~--~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~----~s~~~~~l~~~g~  368 (490)
                      .+..  |... +.+++|+|++.+|++|+   .|+.|++||++.... .......+...|.+++    |+|++++| ++|+
T Consensus       207 ~~~~~~h~~~-v~~~~~s~~~~~l~s~~---~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~s~~~~~l-~s~~  280 (437)
T 3gre_A          207 IIENSPRHGA-VSSICIDEECCVLILGT---TRGIIDIWDIRFNVL-IRSWSFGDHAPITHVEVCQFYGKNSVIV-VGGS  280 (437)
T ss_dssp             EEECCGGGCC-EEEEEECTTSCEEEEEE---TTSCEEEEETTTTEE-EEEEBCTTCEEEEEEEECTTTCTTEEEE-EEES
T ss_pred             EEccCCCCCc-eEEEEECCCCCEEEEEc---CCCeEEEEEcCCccE-EEEEecCCCCceEEEEeccccCCCccEE-EEEc
Confidence            9987  6664 99999999999999998   689999999997542 2222335667899994    45567777 8999


Q ss_pred             CCCeEEEEEecCCCCeeEEeeee------------------------eCCCceeeEEEeeCceeEEee--cceeEEEEec
Q psy17682        369 GDSVIRYFEITAEPPFVHYINTF------------------------QTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLN  422 (490)
Q Consensus       369 ~dg~i~iwd~~~~~~~~~~~~~~------------------------~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~  422 (490)
                      .||.|++||+.+++.... +...                        .+...|++++|+ ++.+++++  ++.+++|++.
T Consensus       281 ~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~  358 (437)
T 3gre_A          281 SKTFLTIWNFVKGHCQYA-FINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLN  358 (437)
T ss_dssp             TTEEEEEEETTTTEEEEE-EESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETT
T ss_pred             CCCcEEEEEcCCCcEEEE-EEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECC
Confidence            999999999998763222 2111                        134568999999 77777777  4588999998


Q ss_pred             CCCceEEE
Q psy17682        423 NSGLCQVV  430 (490)
Q Consensus       423 ~~~~~~~i  430 (490)
                      +++....+
T Consensus       359 ~~~~~~~~  366 (437)
T 3gre_A          359 ELSSSKAV  366 (437)
T ss_dssp             CGGGCEEE
T ss_pred             CcccceEE
Confidence            87744443

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.97  E-value=1.5e-29  Score=245.01  Aligned_cols=250  Identities=18%  Similarity=0.197  Sum_probs=194.5

Q ss_pred             ccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecc
Q psy17682         41 LYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISE  120 (490)
Q Consensus        41 ~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  120 (490)
                      .+|...|.+++|+|++..+|++++.||.|++||+.++..                  .                      
T Consensus        96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~------------------~----------------------  135 (408)
T 4a11_B           96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT------------------A----------------------  135 (408)
T ss_dssp             TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE------------------E----------------------
T ss_pred             ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc------------------c----------------------
Confidence            469999999999996658999999999999999987430                  0                      


Q ss_pred             ccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCC--CEEEEEeCCCcEEEEECCCC
Q psy17682        121 DYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDD--NVIASGSEDCVVKVWQIPDG  198 (490)
Q Consensus       121 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~--~~l~s~~~dg~i~iwd~~~~  198 (490)
                                                            .. ..|...+.++.|+|.+.  .++++++.||.|++||++++
T Consensus       136 --------------------------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~  176 (408)
T 4a11_B          136 --------------------------------------DV-FNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG  176 (408)
T ss_dssp             --------------------------------------EE-EECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS
T ss_pred             --------------------------------------ee-ccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc
Confidence                                                  01 12556788899988542  49999999999999999888


Q ss_pred             CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe-eEEEE---------------ecCCCcEE
Q psy17682        199 GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE-IMIQI---------------ECHPDIVY  262 (490)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~---------------~~~~~~v~  262 (490)
                      +....       +.+|...|.+++|+|+++.+|++++.||.|++||+++++ .+..+               ..|...|.
T Consensus       177 ~~~~~-------~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  249 (408)
T 4a11_B          177 SCSHI-------LQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVN  249 (408)
T ss_dssp             CCCEE-------ECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEE
T ss_pred             ceeee-------ecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCcee
Confidence            76554       445999999999999997679999999999999998765 44444               46888999


Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecC-----CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC
Q psy17682        263 SASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHE-----GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD  337 (490)
Q Consensus       263 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~  337 (490)
                      +++|+|++++|++++.||.|++||+++++.......+.     ............+.+++++    .++.|++||+.+..
T Consensus       250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~v~d~~~~~  325 (408)
T 4a11_B          250 GLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVP----YGSTIAVYTVYSGE  325 (408)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEE----ETTEEEEEETTTCC
T ss_pred             EEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEe----cCCEEEEEECcCCc
Confidence            99999999999999999999999999987655443221     1112222233334555554    48899999999866


Q ss_pred             CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682        338 EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP  383 (490)
Q Consensus       338 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~  383 (490)
                      ....  ...|...|.+++|+|++++| ++|+.||.|++||+.++++
T Consensus       326 ~~~~--~~~~~~~v~~~~~s~~~~~l-~s~~~dg~i~iw~~~~~~~  368 (408)
T 4a11_B          326 QITM--LKGHYKTVDCCVFQSNFQEL-YSGSRDCNILAWVPSLYEP  368 (408)
T ss_dssp             EEEE--ECCCSSCEEEEEEETTTTEE-EEEETTSCEEEEEECC---
T ss_pred             ceee--eccCCCeEEEEEEcCCCCEE-EEECCCCeEEEEeCCCCCc
Confidence            4322  23577889999999999998 7899999999999999874

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.97  E-value=7.2e-29  Score=231.86  Aligned_cols=266  Identities=19%  Similarity=0.236  Sum_probs=209.5

Q ss_pred             eeeeeccCCCC-CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeeccc
Q psy17682         24 RLTYFSPRTLT-EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVG  102 (490)
Q Consensus        24 ~~~~~~~~~~~-~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (490)
                      .+..||..+.. .....+.+|...|++++|+|++ ++|+||+.||+|++||+.+++..                 ....+
T Consensus        46 tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~~~~~-----------------~~~~~  107 (318)
T 4ggc_A           46 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKRL-----------------RNMTS  107 (318)
T ss_dssp             EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEE-----------------EEEEC
T ss_pred             EEEEEECCCCCEEEEEEecCCCCeEEEEEECCCC-CEEEEEECCCcEEEeecCCceeE-----------------EEecC
Confidence            36677765533 2334567899999999999999 89999999999999999886511                 11111


Q ss_pred             CCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEE
Q psy17682        103 GKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIA  182 (490)
Q Consensus       103 ~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~  182 (490)
                      +      ...+.++...+.       .+++++.++.+.+|...    .   .......+.+|...+.++.+++++ .+++
T Consensus       108 h------~~~~~~~~~~~~-------~l~s~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~-~~l~  166 (318)
T 4ggc_A          108 H------SARVGSLSWNSY-------ILSSGSRSGHIHHHDVR----V---AEHHVATLSGHSQEVCGLRWAPDG-RHLA  166 (318)
T ss_dssp             C------SSCEEEEEEETT-------EEEEEETTSEEEEEETT----S---SSCEEEEEECCSSCEEEEEECTTS-SEEE
T ss_pred             c------cceEEEeecCCC-------EEEEEecCCceEeeecC----C---CceeEEEEcCccCceEEEEEcCCC-CEEE
Confidence            1      112233333332       57788999999999875    1   122455678999999999999988 8999


Q ss_pred             EEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEE--EEeCCCcEEEEECCCCeeEEEEecCCCc
Q psy17682        183 SGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL--TAGSDNNVAIWNVGTGEIMIQIECHPDI  260 (490)
Q Consensus       183 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~--s~~~dg~v~iwd~~~~~~~~~~~~~~~~  260 (490)
                      +++.||+|++||+++++.....   ......+...|.++.++|.+..++.  +++.++.|++||.+......... +...
T Consensus       167 s~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~  242 (318)
T 4ggc_A          167 SGGNDNLVNVWPSAPGEGGWVP---LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQ  242 (318)
T ss_dssp             EEETTSCEEEEESSCBTTBSCC---SEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSC
T ss_pred             EEecCcceeEEECCCCcccccc---eeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceee
Confidence            9999999999999887654322   2234558889999999998876654  55678999999999888776655 7788


Q ss_pred             EEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC
Q psy17682        261 VYSASWNWDGSKLLTTC--KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL  336 (490)
Q Consensus       261 v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~  336 (490)
                      +..+.|+|+++.+++++  .|+.|++||+++++++.++.+|.+. |.+++|+|+|++|++|+   .|+.|++||+...
T Consensus       243 v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~-V~~l~~spdg~~l~S~s---~D~~v~iWd~~~~  316 (318)
T 4ggc_A          243 VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSR-VLSLTMSPDGATVASAA---ADETLRLWRCFEL  316 (318)
T ss_dssp             EEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSCEEEEE---TTTEEEEECCSCC
T ss_pred             eeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCC-EEEEEEcCCCCEEEEEe---cCCeEEEEECCCC
Confidence            99999999999887765  7899999999999999999999876 99999999999999998   7999999998764

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.6e-30  Score=271.17  Aligned_cols=254  Identities=16%  Similarity=0.156  Sum_probs=203.5

Q ss_pred             ceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC--CCCEEEEEeC
Q psy17682        159 ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT--AQNVLLTAGS  236 (490)
Q Consensus       159 ~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~s~~~  236 (490)
                      .++.+|.+.|++++|+|++ .+|++|+.||.|++||+.++..     .....+.+|...|++++|+|+  + ++|++|+.
T Consensus         3 ~~l~gH~~~V~~l~~s~dg-~~latg~~dg~I~vwd~~~~~~-----~~~~~l~~h~~~V~~l~~s~~~~~-~~l~s~s~   75 (753)
T 3jro_A            3 VIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETH-----KLIDTLTGHEGPVWRVDWAHPKFG-TILASCSY   75 (753)
T ss_dssp             -----CCCCEEEECCCSSS-CCEEEEETTTEEEEEEEETTEE-----EEEEEECCCSSCEEEEEECCTTSC-SEEEEEET
T ss_pred             eecccCcceeEEEEECCCC-CeEEEEECCCcEEEEecCCCCC-----ccceeccCCcCceEEEEecCCCCC-CEEEEEeC
Confidence            3568999999999999998 7999999999999999874322     223346679999999999988  6 59999999


Q ss_pred             CCcEEEEECCCCe--eEEEEecCCCcEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCc--eeeeeeecCCCceeEEEEe
Q psy17682        237 DNNVAIWNVGTGE--IMIQIECHPDIVYSASWNWD--GSKLLTTCKDKKMRIINPRTGA--IEEEAVCHEGSKATRAIYL  310 (490)
Q Consensus       237 dg~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~s  310 (490)
                      ||.|++||+++++  .+..+..|...|.+++|+|+  ++.+++++.||.|++||++++.  ....+..|... +.++.|+
T Consensus        76 Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~-v~~l~~~  154 (753)
T 3jro_A           76 DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG-VNSASWA  154 (753)
T ss_dssp             TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSC-EEEEEEC
T ss_pred             CCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCc-eEEEEec
Confidence            9999999999887  67777889999999999999  9999999999999999999874  33444566654 9999999


Q ss_pred             C-------------CCcEEEEEeCCCceeEEEEecCCCCCCCeEE--EeccCCCceeeeeecCC---CCeEEEEecCCCe
Q psy17682        311 K-------------SGLIFTTGFSKMSERQYSLRAPDHLDEPIVM--VELDTSNGVMFPLYDPD---TNLVYLCGKGDSV  372 (490)
Q Consensus       311 ~-------------~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~--~~~~~~~~i~~~~~s~~---~~~l~~~g~~dg~  372 (490)
                      |             ++.++++|+   .++.|++||+++.......  ....|...|.+++|+|+   ++++ ++|+.||.
T Consensus       155 p~~~~~~~~~~~~~d~~~l~sgs---~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l-~s~s~Dg~  230 (753)
T 3jro_A          155 PATIEEDGEHNGTKESRKFVTGG---ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYL-ASVSQDRT  230 (753)
T ss_dssp             CCC---------CGGGCCEEEEE---TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE-EEEESSSC
T ss_pred             CcccccccccccCCCCCEEEEEE---CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEE-EEEecCCE
Confidence            9             588999998   6899999999876543222  22357788999999999   7777 88999999


Q ss_pred             EEEEEecCCCCee--EEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCC
Q psy17682        373 IRYFEITAEPPFV--HYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNS  424 (490)
Q Consensus       373 i~iwd~~~~~~~~--~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~  424 (490)
                      |++||+.+++...  .......+...|++++|+|++.+++++  ++.+++|++...
T Consensus       231 I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~  286 (753)
T 3jro_A          231 CIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE  286 (753)
T ss_dssp             EEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred             EEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence            9999999864211  122223355789999999999988877  447889998753

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.97  E-value=1.2e-29  Score=248.16  Aligned_cols=269  Identities=17%  Similarity=0.246  Sum_probs=213.6

Q ss_pred             cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEE
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVK  191 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~  191 (490)
                      .+.++++...       .+++++.+|.|++|++.     .   ......+.+|.+.|.+++|  ++ .+|++|+.||+|+
T Consensus       135 ~v~~~~~d~~-------~l~~g~~dg~i~iwd~~-----~---~~~~~~~~~h~~~v~~l~~--~~-~~l~sg~~dg~i~  196 (435)
T 1p22_A          135 GVYCLQYDDQ-------KIVSGLRDNTIKIWDKN-----T---LECKRILTGHTGSVLCLQY--DE-RVIITGSSDSTVR  196 (435)
T ss_dssp             CEEEEECCSS-------EEEEEESSSCEEEEESS-----S---CCEEEEECCCSSCEEEEEC--CS-SEEEEEETTSCEE
T ss_pred             cEEEEEECCC-------EEEEEeCCCeEEEEeCC-----C---CeEEEEEcCCCCcEEEEEE--CC-CEEEEEcCCCeEE
Confidence            4566666433       67889999999999985     2   2345678899999999999  45 7999999999999


Q ss_pred             EEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeE---EEEecCCCcEEEEEEcC
Q psy17682        192 VWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIM---IQIECHPDIVYSASWNW  268 (490)
Q Consensus       192 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~---~~~~~~~~~v~~~~~~~  268 (490)
                      +||+.+++.+..       +.+|...|.+++|++   ..+++|+.||.|++||+++++.+   ..+.+|...|.+++|  
T Consensus       197 vwd~~~~~~~~~-------~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--  264 (435)
T 1p22_A          197 VWDVNTGEMLNT-------LIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--  264 (435)
T ss_dssp             EEESSSCCEEEE-------ECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--
T ss_pred             EEECCCCcEEEE-------EcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--
Confidence            999998876554       446999999999974   38999999999999999987755   567789999999999  


Q ss_pred             CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC
Q psy17682        269 DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS  348 (490)
Q Consensus       269 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~  348 (490)
                      +++++++++.||.|++||+++++.+..+..|... +.++.+  ++.++++|+   .|+.|++||++++.....  ...|.
T Consensus       265 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-v~~~~~--~~~~l~~g~---~dg~i~iwd~~~~~~~~~--~~~h~  336 (435)
T 1p22_A          265 DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG-IACLQY--RDRLVVSGS---SDNTIRLWDIECGACLRV--LEGHE  336 (435)
T ss_dssp             ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSC-EEEEEE--ETTEEEEEE---TTSCEEEEETTTCCEEEE--ECCCS
T ss_pred             CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCc-EEEEEe--CCCEEEEEe---CCCeEEEEECCCCCEEEE--EeCCc
Confidence            6889999999999999999999999999988775 888888  467888888   689999999998654322  23566


Q ss_pred             CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC--------eeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEE
Q psy17682        349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP--------FVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRF  418 (490)
Q Consensus       349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~--------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~  418 (490)
                      ..|.+++|  ++++| ++|+.||.|++||+.+++.        ....+  ..+..+|.+++|  ++.+++++  ++.+++
T Consensus       337 ~~v~~~~~--~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~--~~~~l~s~s~Dg~i~i  409 (435)
T 1p22_A          337 ELVRCIRF--DNKRI-VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL--VEHSGRVFRLQF--DEFQIVSSSHDDTILI  409 (435)
T ss_dssp             SCEEEEEC--CSSEE-EEEETTSCEEEEEHHHHTSTTSCTTTTEEEEE--CCCSSCCCCEEE--CSSCEEECCSSSEEEE
T ss_pred             CcEEEEEe--cCCEE-EEEeCCCcEEEEECCCCCCccccccchheeec--cCCCCCeEEEEe--CCCEEEEEeCCCEEEE
Confidence            78999988  67777 8899999999999986541        12222  245578999999  56666666  458899


Q ss_pred             EEecCCC
Q psy17682        419 FRLNNSG  425 (490)
Q Consensus       419 ~~~~~~~  425 (490)
                      |++.+..
T Consensus       410 wd~~~~~  416 (435)
T 1p22_A          410 WDFLNDP  416 (435)
T ss_dssp             EC-----
T ss_pred             EECCCCC
Confidence            9998765

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.97  E-value=4.5e-30  Score=248.44  Aligned_cols=260  Identities=8%  Similarity=0.029  Sum_probs=198.9

Q ss_pred             ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcE
Q psy17682        111 STANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVV  190 (490)
Q Consensus       111 ~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i  190 (490)
                      ..+.+++||||+     ..+++++.|++++  +.     ..+      ..+.+|...|.+++|+|+|        .++.+
T Consensus        16 ~~v~sv~~SpDG-----~~iASas~D~TV~--d~-----~~~------~~l~gh~~~v~~V~FsPdg--------~~~~~   69 (588)
T 2j04_A           16 DWKNNLTWARDG-----TLYLTTFPDISIG--QP-----KYA------KDINCNSKNLFHVKEFPLE--------FENKL   69 (588)
T ss_dssp             SSSCCEEECTTS-----CEEEECSSSEEEE--EE-----CCC------SCCSSBGGGTEEEEEECCC--------CCCTT
T ss_pred             ccEEEEEECCCC-----CEEEEEcCCceee--cc-----ccc------ceecCCCccEEEEEECCCC--------CcceE
Confidence            468999999996     5788999999999  32     222      2336999999999999987        46666


Q ss_pred             EEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCC-----cEEEEE
Q psy17682        191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPD-----IVYSAS  265 (490)
Q Consensus       191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-----~v~~~~  265 (490)
                      .+|+.+..   ..+.     + .|...|.+++|+|+|. +|++++.||.|++||...  .+..+. |..     .+.+++
T Consensus        70 ~~~~~~~~---~~~~-----~-~~~~~V~~vawSPdG~-~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~sva  136 (588)
T 2j04_A           70 DFELAQQN---GLLN-----S-QPVCYPRVCKPSPIDD-WMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFE  136 (588)
T ss_dssp             TTSCCCSS---CSST-----T-SCSCCEEEEEECSSSS-CEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEE
T ss_pred             EEEeCCCc---eEee-----c-CCCCcEEEEEECCCCC-EEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEE
Confidence            56554322   2221     1 2678999999999996 899999999999999543  666666 665     499999


Q ss_pred             EcCCCCEEEEEeCCCeEEEEeCCCCce-------eeee----eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCC
Q psy17682        266 WNWDGSKLLTTCKDKKMRIINPRTGAI-------EEEA----VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPD  334 (490)
Q Consensus       266 ~~~~~~~l~~~~~dg~i~iwd~~~~~~-------~~~~----~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~  334 (490)
                      |||+|++|++|+.||+|++||+.++..       +.++    .+|.. .+.+++|+|+|  +++++   .|+.+++||+.
T Consensus       137 fSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~-~V~sVawSPdg--Laass---~D~tVrlWd~~  210 (588)
T 2j04_A          137 WNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKD-WVTHIVWYEDV--LVAAL---SNNSVFSMTVS  210 (588)
T ss_dssp             ECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCC-CEEEEEEETTE--EEEEE---TTCCEEEECCC
T ss_pred             EcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccc-cEEEEEEcCCc--EEEEe---CCCeEEEEECC
Confidence            999999999999999999999998753       5665    34444 49999999999  55555   59999999998


Q ss_pred             CCCCCe--EEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEE--eeCceeEE
Q psy17682        335 HLDEPI--VMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGM--MPKRGCDV  410 (490)
Q Consensus       335 ~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~--sp~~~~l~  410 (490)
                      ......  ......|...|.+++|+  |+.| ++++ ++.|++||+.+++.   ....+.+...+.+++|  +|++..++
T Consensus       211 ~~~~~~~~~tL~~~h~~~V~svaFs--g~~L-ASa~-~~tIkLWd~~~~~~---~~~~~gh~~~V~~va~~~s~d~~~La  283 (588)
T 2j04_A          211 ASSHQPVSRMIQNASRRKITDLKIV--DYKV-VLTC-PGYVHKIDLKNYSI---SSLKTGSLENFHIIPLNHEKESTILL  283 (588)
T ss_dssp             SSSSCCCEEEEECCCSSCCCCEEEE--TTEE-EEEC-SSEEEEEETTTTEE---EEEECSCCSCCCEEEETTCSSCEEEE
T ss_pred             CCccccceeeecccccCcEEEEEEE--CCEE-EEEe-CCeEEEEECCCCeE---EEEEcCCCceEEEEEeeeCCCCCEEE
Confidence            766321  11212466789999999  6777 5665 69999999998762   1222357788999999  99998888


Q ss_pred             eeccee-EEEEec
Q psy17682        411 NSCEIG-RFFRLN  422 (490)
Q Consensus       411 ~~~~~~-~~~~~~  422 (490)
                      ++++.. ++|...
T Consensus       284 ~a~edG~klw~~d  296 (588)
T 2j04_A          284 MSNKTSYKVLLED  296 (588)
T ss_dssp             ECSSCEEEEEESS
T ss_pred             EEcCCCCEEEeec
Confidence            886533 588876

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.97  E-value=9.4e-29  Score=238.34  Aligned_cols=274  Identities=12%  Similarity=0.098  Sum_probs=211.3

Q ss_pred             ceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEEEeeCCCc
Q psy17682         58 NVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQ  137 (490)
Q Consensus        58 ~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g  137 (490)
                      .++++++.|+.|++||+.+++.                  ...+..      ...+.+++|+|+..    .+++++..++
T Consensus         3 ~l~vs~~~d~~v~v~d~~~~~~------------------~~~~~~------~~~~~~~~~s~dg~----~l~~~~~~d~   54 (391)
T 1l0q_A            3 FAYIANSESDNISVIDVTSNKV------------------TATIPV------GSNPMGAVISPDGT----KVYVANAHSN   54 (391)
T ss_dssp             EEEEEETTTTEEEEEETTTTEE------------------EEEEEC------SSSEEEEEECTTSS----EEEEEEGGGT
T ss_pred             EEEEEcCCCCEEEEEECCCCeE------------------EEEeec------CCCcceEEECCCCC----EEEEECCCCC
Confidence            6789999999999999987641                  111111      11367899999862    2345677899


Q ss_pred             eEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccC
Q psy17682        138 ALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRR  217 (490)
Q Consensus       138 ~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  217 (490)
                      .|++|++.     .++   ....+..|. .+.+++|+|++..++++++.|+.|++||+.+++....+.        +...
T Consensus        55 ~i~v~d~~-----~~~---~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~--------~~~~  117 (391)
T 1l0q_A           55 DVSIIDTA-----TNN---VIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK--------TGKS  117 (391)
T ss_dssp             EEEEEETT-----TTE---EEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--------CSSS
T ss_pred             eEEEEECC-----CCe---EEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe--------CCCC
Confidence            99999985     222   233444444 999999999984344566678999999999887655432        4557


Q ss_pred             EEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCCceeeee
Q psy17682        218 VGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL-LTTCKDKKMRIINPRTGAIEEEA  296 (490)
Q Consensus       218 v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~  296 (490)
                      +.+++|+|+++.++++++.++.|++||+.+++.+..+..+ ..+.+++|+|+++.+ ++++.++.|++||+++++....+
T Consensus       118 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~  196 (391)
T 1l0q_A          118 PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTV  196 (391)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence            8999999999745578888999999999999988888754 567999999999877 56778899999999999887776


Q ss_pred             eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEE
Q psy17682        297 VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYF  376 (490)
Q Consensus       297 ~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iw  376 (490)
                      ..+.  .+..++|+|+|+++++++.+..++.|++||+.+.+.   ...+.....+..++|+|++++++++++.|+.|++|
T Consensus       197 ~~~~--~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~  271 (391)
T 1l0q_A          197 KVEA--APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI---TARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVI  271 (391)
T ss_dssp             ECSS--EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE---EEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             ecCC--CccceEECCCCCEEEEEecCcCCCcEEEEECCCCeE---EEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEE
Confidence            5433  488999999999888886433478999999987643   22333345688999999999998888999999999


Q ss_pred             EecCCC
Q psy17682        377 EITAEP  382 (490)
Q Consensus       377 d~~~~~  382 (490)
                      |+.+++
T Consensus       272 d~~~~~  277 (391)
T 1l0q_A          272 DTATNT  277 (391)
T ss_dssp             ETTTTE
T ss_pred             ECCCCc
Confidence            999876

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.97  E-value=6.3e-31  Score=253.51  Aligned_cols=206  Identities=17%  Similarity=0.138  Sum_probs=149.2

Q ss_pred             eeecccCCeeEEEECC--------CCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEE
Q psy17682        160 LVGGHKGPVLDIAWSP--------HDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVL  231 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p--------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l  231 (490)
                      .+.||.+.|++++|+|        ++ ++|++|+.|++|+|||+.++.....       +..|...|.+++|+|++.++|
T Consensus       131 ~~~gH~~~v~~v~~~p~~~~~~~~d~-~~las~s~D~tv~~Wd~~~~~~~~~-------~~~~~~~v~~v~~~p~~~~~l  202 (393)
T 4gq1_A          131 GKSGHHNFVNDIDIADVYSADNRLAE-QVIASVGDDCTLIIWRLTDEGPILA-------GYPLSSPGISVQFRPSNPNQL  202 (393)
T ss_dssp             TTTSCSSCEEEEEEEEEECTTCSEEE-EEEEEEETTSEEEEEEEETTEEEEE-------EEECSSCEEEEEEETTEEEEE
T ss_pred             ccCCCCCceEEEEEccccccccCCCC-CEEEEEECCCeEEEEECCCCceeee-------ecCCCCCcEEEEECCCCCceE
Confidence            4569999999999987        56 8999999999999999977654433       445889999999999986689


Q ss_pred             EEEeCCCcEEEEECCCCeeEEEE-------------------------ecCCCcEEEEEEc-CCCCEEEEEeCCCeEEEE
Q psy17682        232 LTAGSDNNVAIWNVGTGEIMIQI-------------------------ECHPDIVYSASWN-WDGSKLLTTCKDKKMRII  285 (490)
Q Consensus       232 ~s~~~dg~v~iwd~~~~~~~~~~-------------------------~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~iw  285 (490)
                      ++|+.|++|++||+++++.....                         .+|...+.++.|+ |+++.|++++.|+++++|
T Consensus       203 ~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vw  282 (393)
T 4gq1_A          203 IVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRW  282 (393)
T ss_dssp             EEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEE
T ss_pred             EecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEE
Confidence            99999999999999877543221                         3567778899987 799999999999999999


Q ss_pred             eCCCCceeeeeeecCCC-----------------ceeEEEEeC--CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc
Q psy17682        286 NPRTGAIEEEAVCHEGS-----------------KATRAIYLK--SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD  346 (490)
Q Consensus       286 d~~~~~~~~~~~~~~~~-----------------~~~~~~~s~--~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~  346 (490)
                      |+..++....+..+...                 ......++|  ++.++++|+   .|+.|++||..++.......  .
T Consensus       283 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs---~Dg~V~lwd~~~~~~~~~~~--~  357 (393)
T 4gq1_A          283 NLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHS---QHGLIQLINTYEKDSNSIPI--Q  357 (393)
T ss_dssp             EC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEET---TTTEEEEEETTCTTCCEEEE--E
T ss_pred             ECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEEC---CCCEEEEEECCCCcEEEEec--C
Confidence            99887655544433221                 012223333  345666776   68999999999877654433  5


Q ss_pred             CCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        347 TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       347 ~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      +...|.+++|+|||++| |+++.+| +.+|.+..
T Consensus       358 ~~~~V~svafspdG~~L-A~as~~G-v~lvrL~g  389 (393)
T 4gq1_A          358 LGMPIVDFCWHQDGSHL-AIATEGS-VLLTRLMG  389 (393)
T ss_dssp             CSSCEEEEEECTTSSEE-EEEESSE-EEEEEEGG
T ss_pred             CCCcEEEEEEcCCCCEE-EEEeCCC-eEEEEEeC
Confidence            66789999999999999 7777655 67777653

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.97  E-value=1.8e-28  Score=236.42  Aligned_cols=271  Identities=11%  Similarity=0.105  Sum_probs=211.9

Q ss_pred             EEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccce
Q psy17682        129 EIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPV  208 (490)
Q Consensus       129 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  208 (490)
                      ++++++.++.|++|++.     .++   ....+.+|. .+.+++|+|++..++++++.|+.|++||+.+++....+.   
T Consensus         4 l~vs~~~d~~v~v~d~~-----~~~---~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~---   71 (391)
T 1l0q_A            4 AYIANSESDNISVIDVT-----SNK---VTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP---   71 (391)
T ss_dssp             EEEEETTTTEEEEEETT-----TTE---EEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE---
T ss_pred             EEEEcCCCCEEEEEECC-----CCe---EEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE---
Confidence            56778899999999985     222   344556664 589999999984445788899999999998887665443   


Q ss_pred             eeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE-EEEeCCCeEEEEeC
Q psy17682        209 VDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL-LTTCKDKKMRIINP  287 (490)
Q Consensus       209 ~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~  287 (490)
                           +...+.+++|+|+++.++++++.++.|++||+.+++.+..+.. ...+.+++|+|+++.+ ++++.++.|++||+
T Consensus        72 -----~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~  145 (391)
T 1l0q_A           72 -----AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINT  145 (391)
T ss_dssp             -----CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred             -----CCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence                 3348999999999974445666779999999999998888874 4578999999999977 67778999999999


Q ss_pred             CCCceeeeeeecCCCceeEEEEeCCCcEE-EEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEE
Q psy17682        288 RTGAIEEEAVCHEGSKATRAIYLKSGLIF-TTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLC  366 (490)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l-~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  366 (490)
                      ++++.+..+..+..  +..++|+|+++.+ +++.   .++.|++||+++...   .....+...+..++|+|++++++++
T Consensus       146 ~~~~~~~~~~~~~~--~~~~~~~~dg~~l~~~~~---~~~~v~~~d~~~~~~---~~~~~~~~~~~~~~~~~~g~~l~~~  217 (391)
T 1l0q_A          146 VTKAVINTVSVGRS--PKGIAVTPDGTKVYVANF---DSMSISVIDTVTNSV---IDTVKVEAAPSGIAVNPEGTKAYVT  217 (391)
T ss_dssp             TTTEEEEEEECCSS--EEEEEECTTSSEEEEEET---TTTEEEEEETTTTEE---EEEEECSSEEEEEEECTTSSEEEEE
T ss_pred             CCCcEEEEEecCCC--cceEEECCCCCEEEEEeC---CCCEEEEEECCCCeE---EEEEecCCCccceEECCCCCEEEEE
Confidence            99998887776543  7999999999877 4555   578999999987642   3333455678999999999999665


Q ss_pred             ec--CCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeE-Eee--cceeEEEEecCCCceEE
Q psy17682        367 GK--GDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCD-VNS--CEIGRFFRLNNSGLCQV  429 (490)
Q Consensus       367 g~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l-~~~--~~~~~~~~~~~~~~~~~  429 (490)
                      +.  .++.|++||+.+++    .+..+..+..+.+++|+|++..+ +++  ++.+++|++.+++.+..
T Consensus       218 ~~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~  281 (391)
T 1l0q_A          218 NVDKYFNTVSMIDTGTNK----ITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITAT  281 (391)
T ss_dssp             EECSSCCEEEEEETTTTE----EEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             ecCcCCCcEEEEECCCCe----EEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEE
Confidence            54  78999999999876    33344445568999999999766 443  45889999988764433

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.97  E-value=3.9e-29  Score=236.60  Aligned_cols=270  Identities=7%  Similarity=-0.090  Sum_probs=195.3

Q ss_pred             EEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccccc
Q psy17682        127 KEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTE  206 (490)
Q Consensus       127 ~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  206 (490)
                      ...+++++.+|.|++|++.     .++   ....+.  ...|.++.|+|.    +++++.|++|++|+......+..+..
T Consensus        48 ~~~l~sg~~Dg~v~iwd~~-----~~~---~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~  113 (343)
T 3lrv_A           48 KWVCMCRCEDGALHFTQLK-----DSK---TITTIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKT  113 (343)
T ss_dssp             EEEEEEEEETTEEEEEEES-----SSS---CEEEEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTT
T ss_pred             CCEEEEECCCCcEEEEECC-----CCc---EEEEEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCC
Confidence            3578899999999999985     222   223333  577889999985    99999999999998763211111100


Q ss_pred             c--e-eeecccccCEEEEEEee--CCCCEEEEEeCCCcEEEEECCCCeeEEEEe-cCCCcEEEEEEcCCCCEEEEEeCCC
Q psy17682        207 P--V-VDLLYHQRRVGLVLWHP--TAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWDGSKLLTTCKDK  280 (490)
Q Consensus       207 ~--~-~~~~~~~~~v~~~~~~p--~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg  280 (490)
                      .  . ....+|...|.+++|+|  ++. ++++++.||.|++||+++++.+.... .+...+.+++|+|++.+|++|+.||
T Consensus       114 ~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg  192 (343)
T 3lrv_A          114 NKVLREIEVDSANEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG  192 (343)
T ss_dssp             CCEEEEEECCCSSCEEEEECCC---CC-EEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS
T ss_pred             cceeEEeecCCCCCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC
Confidence            0  1 11224678899999999  885 99999999999999999998876664 4556799999999999999999999


Q ss_pred             eEEEEeCCCCcee-eeeee-cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc-CCCce--eeee
Q psy17682        281 KMRIINPRTGAIE-EEAVC-HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD-TSNGV--MFPL  355 (490)
Q Consensus       281 ~i~iwd~~~~~~~-~~~~~-~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~-~~~~i--~~~~  355 (490)
                      .|++||+++++.. ..+.. |.+. +.+++|+|+|.+|++++    ++.|++||+++......+.... +...+  .+++
T Consensus       193 ~i~iwd~~~~~~~~~~~~~~h~~~-v~~l~fs~~g~~l~s~~----~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (343)
T 3lrv_A          193 ILDVYNLSSPDQASSRFPVDEEAK-IKEVKFADNGYWMVVEC----DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYD  267 (343)
T ss_dssp             CEEEEESSCTTSCCEECCCCTTSC-EEEEEECTTSSEEEEEE----SSBEEEEETTSSTTCBSSCCCBC-----CCEEEE
T ss_pred             EEEEEECCCCCCCccEEeccCCCC-EEEEEEeCCCCEEEEEe----CCeEEEEEcCCCCcceeecccccccccccceEEE
Confidence            9999999999887 77776 7764 99999999999999997    3499999999876543322111 11223  4699


Q ss_pred             ecCCCCeEEEEecC-CCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee---CceeEEee--cceeEEEEecCC
Q psy17682        356 YDPDTNLVYLCGKG-DSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP---KRGCDVNS--CEIGRFFRLNNS  424 (490)
Q Consensus       356 ~s~~~~~l~~~g~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp---~~~~l~~~--~~~~~~~~~~~~  424 (490)
                      |+|+|++| ++++. |+.|++|++.........       .++..++|+|   +...++++  ++.++++.....
T Consensus       268 ~~~~g~~l-~~~s~~d~~i~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~  334 (343)
T 3lrv_A          268 IDDSGKNM-IAYSNESNSLTIYKFDKKTKNWTK-------DEESALCLQSDTADFTDMDVVCGDGGIAAILKTND  334 (343)
T ss_dssp             ECTTSSEE-EEEETTTTEEEEEEECTTTCSEEE-------EEEEECCC----CCCCEEEEEEETTEEEEEEECSS
T ss_pred             ECCCCCEE-EEecCCCCcEEEEEEcccccceEe-------cCceeEecCccccccceeEEEecCCceEEEEecCC
Confidence            99999999 56655 999999999776532222       3567778887   66555544  334444444433

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.97  E-value=2.6e-28  Score=239.77  Aligned_cols=256  Identities=11%  Similarity=0.005  Sum_probs=200.3

Q ss_pred             ecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCC--CCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         39 DLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLK--DGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        39 ~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      ...+|.+.|++++|+|++..++++|+.||+|++||+.  ++..                                     
T Consensus        97 ~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~-------------------------------------  139 (450)
T 2vdu_B           97 GAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV-------------------------------------  139 (450)
T ss_dssp             ---CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC-------------------------------------
T ss_pred             CCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce-------------------------------------
Confidence            4457888999999999994445999999999999987  4320                                     


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCccee--ecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALV--GGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~--~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                                                               ...+  ..|...|.+++|+|++ .+|++|+.||.|++|+
T Consensus       140 -----------------------------------------~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~~g~v~~~~  177 (450)
T 2vdu_B          140 -----------------------------------------LKLRKRFCFSKRPNAISIAEDD-TTVIIADKFGDVYSID  177 (450)
T ss_dssp             -----------------------------------------EEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEE
T ss_pred             -----------------------------------------eeeeecccCCCCceEEEEcCCC-CEEEEEeCCCcEEEEe
Confidence                                                     0011  2567899999999988 8999999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeC---CCCEEEEEeCCCcEEEEECCCCeeEEE-EecCCCcEEEEEEcCCC
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT---AQNVLLTAGSDNNVAIWNVGTGEIMIQ-IECHPDIVYSASWNWDG  270 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~  270 (490)
                      +.+++....   +...+.+|...|++++|+|+   +. +|++|+.|+.|++||+++++.+.. +.+|...|.+++|+ ++
T Consensus       178 ~~~~~~~~~---~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~  252 (450)
T 2vdu_B          178 INSIPEEKF---TQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KD  252 (450)
T ss_dssp             TTSCCCSSC---CCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-ST
T ss_pred             cCCcccccc---cceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CC
Confidence            988765430   11235569999999999999   74 999999999999999999988877 55899999999999 99


Q ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeeeec------------------------CCCceeEEEEeCCCcEEEEEeCCCcee
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIEEEAVCH------------------------EGSKATRAIYLKSGLIFTTGFSKMSER  326 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------------------------~~~~~~~~~~s~~~~~l~~~~~~~~~~  326 (490)
                      ++|++++.|++|++||+++++++..+..+                        ....+..++|+|+++++++++.  .++
T Consensus       253 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~--~d~  330 (450)
T 2vdu_B          253 YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVE--ATK  330 (450)
T ss_dssp             TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEET--TCS
T ss_pred             CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEEC--CCC
Confidence            99999999999999999999988877632                        1234889999999999988873  478


Q ss_pred             EEEEecC--CCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecC------CCeEEEEEecCC
Q psy17682        327 QYSLRAP--DHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKG------DSVIRYFEITAE  381 (490)
Q Consensus       327 ~i~iwd~--~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~------dg~i~iwd~~~~  381 (490)
                      .|++|++  ...........+.....+.+++|+|++ .++++++.      +..|.+|.+...
T Consensus       331 ~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~~~~~  392 (450)
T 2vdu_B          331 CIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIEYNLN  392 (450)
T ss_dssp             EEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred             eEEEEEeccCCCCceeeccEeccCCceEEEEecCCc-EEEEEecccCCCCCCcceEEEEEEcC
Confidence            9999999  443322333333344789999999954 44344443      556899988754

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.97  E-value=1.7e-28  Score=233.94  Aligned_cols=254  Identities=17%  Similarity=0.179  Sum_probs=197.9

Q ss_pred             CCCcceeecccCCeeEEEECCCC--CCEEEEEeCCCcEEEEECCC-CCcccccccceeeecccccCEEEEEEeeCCCCEE
Q psy17682        155 NADHALVGGHKGPVLDIAWSPHD--DNVIASGSEDCVVKVWQIPD-GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVL  231 (490)
Q Consensus       155 ~~~~~~~~~h~~~V~~~~~~p~~--~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l  231 (490)
                      ...+..+.+|.+.|++++|+|++  +.+|++|+.||.|++||+.+ +...      ...+.+|...|.+++|+|+++ +|
T Consensus        29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~------~~~~~~h~~~v~~~~~~~~~~-~l  101 (368)
T 3mmy_A           29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTI------PKAQQMHTGPVLDVCWSDDGS-KV  101 (368)
T ss_dssp             TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEE------EEEEEECSSCEEEEEECTTSS-EE
T ss_pred             cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCcee------EEEeccccCCEEEEEECcCCC-EE
Confidence            34566788999999999999984  48999999999999999987 3322      123566999999999999985 99


Q ss_pred             EEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEE--cCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEE
Q psy17682        232 LTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASW--NWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIY  309 (490)
Q Consensus       232 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  309 (490)
                      ++++.||.|++||+++++.+. +..|...|.+++|  +|++++|++++.||.|++||+++++.+..+..+..  +.++.+
T Consensus       102 ~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~~~  178 (368)
T 3mmy_A          102 FTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPER--CYCADV  178 (368)
T ss_dssp             EEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSC--EEEEEE
T ss_pred             EEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCC--ceEEEe
Confidence            999999999999999988776 4559999999999  89999999999999999999999998888876653  666666


Q ss_pred             eCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCe----EEEEecCCCeEEEEEecCCCCee
Q psy17682        310 LKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNL----VYLCGKGDSVIRYFEITAEPPFV  385 (490)
Q Consensus       310 s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~----l~~~g~~dg~i~iwd~~~~~~~~  385 (490)
                      .++  .+++++   .++.+.+|+++................+..+.+.++...    + ++++.||.|++|++...... 
T Consensus       179 ~~~--~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~dg~i~i~~~~~~~~~-  251 (368)
T 3mmy_A          179 IYP--MAVVAT---AERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGF-ALGSIEGRVAIHYINPPNPA-  251 (368)
T ss_dssp             ETT--EEEEEE---GGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEE-EEEETTSEEEEEESSCSCHH-
T ss_pred             cCC--eeEEEe---CCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeE-EEecCCCcEEEEecCCCCcc-
Confidence            644  555555   588999999987654433333333445566666555443    5 78999999999999987421 


Q ss_pred             EEeeeeeCC-------------CceeeEEEeeCceeEEee--cceeEEEEecCCC
Q psy17682        386 HYINTFQTP-------------DPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSG  425 (490)
Q Consensus       386 ~~~~~~~~~-------------~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~  425 (490)
                      ..+..+..+             .+|++++|+|++.+++++  ++.+++|++.++.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~  306 (368)
T 3mmy_A          252 KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART  306 (368)
T ss_dssp             HHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred             ccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc
Confidence            011122221             169999999999888887  4578999998876

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.96  E-value=1.1e-27  Score=227.64  Aligned_cols=279  Identities=8%  Similarity=0.002  Sum_probs=201.4

Q ss_pred             ccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC
Q psy17682        109 RNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC  188 (490)
Q Consensus       109 ~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg  188 (490)
                      +...|.+++|+|++     ..++++..+ .+++|+..     ..+     .....+...+..+++.++++.++++++.|+
T Consensus        18 h~~~V~~v~fs~dg-----~~la~g~~~-~~~iw~~~-----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   81 (355)
T 3vu4_A           18 VSNPVTDYEFNQDQ-----SCLILSTLK-SFEIYNVH-----PVA-----HIMSQEMRHLSKVRMLHRTNYVAFVTGVKE   81 (355)
T ss_dssp             -CCCCCEEEECTTS-----SEEEEECSS-EEEEEEET-----TEE-----EEEEEECSCCCEEEECTTSSEEEEECSSTT
T ss_pred             CCCceEEEEECCCC-----CEEEEEcCC-EEEEEecC-----Ccc-----eeeeeecCCeEEEEEcCCCCEEEEEECCcc
Confidence            34579999999996     245555555 57899874     111     122233346888899988744446788899


Q ss_pred             cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC-eeEEEEecCCCcEEEEEEc
Q psy17682        189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG-EIMIQIECHPDIVYSASWN  267 (490)
Q Consensus       189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~v~~~~~~  267 (490)
                      +|++||+.+++.+..+.        +...|.++.|+++.   ++++ .|+.|++||+.++ +.+..+..   ....++++
T Consensus        82 ~v~iWd~~~~~~~~~~~--------~~~~v~~v~~~~~~---~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s  146 (355)
T 3vu4_A           82 VVHIWDDVKKQDVSRIK--------VDAPVKDLFLSREF---IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFS  146 (355)
T ss_dssp             EEEEEETTTTEEEEEEE--------CSSCEEEEEECSSE---EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEE
T ss_pred             EEEEEECCCCcEEEEEE--------CCCceEEEEEcCCE---EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEE
Confidence            99999999887765443        66789999998763   4444 4789999999988 66666554   44556677


Q ss_pred             CCCCEEEE--EeCCCeEEEEeCCCCc----------------eeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeE-E
Q psy17682        268 WDGSKLLT--TCKDKKMRIINPRTGA----------------IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQ-Y  328 (490)
Q Consensus       268 ~~~~~l~~--~~~dg~i~iwd~~~~~----------------~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~-i  328 (490)
                      +  .++++  |+.||.|++||+++++                .+..+.+|... +.+++|+|+|++|++|+   .|++ |
T Consensus       147 ~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~-v~~~~~s~~g~~l~s~s---~d~~~v  220 (355)
T 3vu4_A          147 N--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNP-IKMVRLNRKSDMVATCS---QDGTII  220 (355)
T ss_dssp             T--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSC-EEEEEECTTSSEEEEEE---TTCSEE
T ss_pred             c--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCc-eEEEEECCCCCEEEEEe---CCCCEE
Confidence            6  56666  5789999999999865                26777788875 99999999999999999   6887 9


Q ss_pred             EEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCee-EEeee-----------------
Q psy17682        329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFV-HYINT-----------------  390 (490)
Q Consensus       329 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~-~~~~~-----------------  390 (490)
                      ++||+++++....+....|...|.+++|+|++++| ++++.|+.|++||+..+.... ..+..                 
T Consensus       221 ~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l-~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (355)
T 3vu4_A          221 RVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKL-AVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFK  299 (355)
T ss_dssp             EEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEE-EEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEE
T ss_pred             EEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEE-EEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEE
Confidence            99999987654333322277889999999999998 789999999999998653110 01000                 


Q ss_pred             ee--CCCceeeEEEeeCceeEEeec--ceeEEEEecCCC
Q psy17682        391 FQ--TPDPQRGIGMMPKRGCDVNSC--EIGRFFRLNNSG  425 (490)
Q Consensus       391 ~~--~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~~~~  425 (490)
                      +.  ...+...++|+|++..+++++  +.+++|++..+.
T Consensus       300 ~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~  338 (355)
T 3vu4_A          300 LSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD  338 (355)
T ss_dssp             CCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred             eccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence            00  112347799999999888874  466788876644

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.96  E-value=3.3e-27  Score=230.74  Aligned_cols=252  Identities=10%  Similarity=0.025  Sum_probs=201.2

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCc
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNN  239 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~  239 (490)
                      .+..+ ..+.+++|+|++ .++++++.|+.|++||+.+++......  ...+.+|...|.+++|+|++. ++++++.|+.
T Consensus       118 ~~~~~-~~~~~~~~s~~~-~~~~~~~~~~~i~~~d~~~g~~~~~~~--~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~  192 (433)
T 3bws_A          118 RFKTG-FQPKSVRFIDNT-RLAIPLLEDEGMDVLDINSGQTVRLSP--PEKYKKKLGFVETISIPEHNE-LWVSQMQANA  192 (433)
T ss_dssp             EEECS-SCBCCCEESSSS-EEEEEBTTSSSEEEEETTTCCEEEECC--CHHHHTTCCEEEEEEEGGGTE-EEEEEGGGTE
T ss_pred             EEcCC-CCceEEEEeCCC-eEEEEeCCCCeEEEEECCCCeEeeecC--cccccccCCceeEEEEcCCCE-EEEEECCCCE
Confidence            34444 456699999944 788888889999999999887765322  112456888999999999984 9999999999


Q ss_pred             EEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEE
Q psy17682        240 VAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTT  318 (490)
Q Consensus       240 v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~  318 (490)
                      |++||+++++.+..+..|...+.+++|+|+++.+++++ .|+.|++||+++++.+..+..+.  .+..++|+|+|+.+++
T Consensus       193 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~~  270 (433)
T 3bws_A          193 VHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG--LPRGLLLSKDGKELYI  270 (433)
T ss_dssp             EEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS--EEEEEEECTTSSEEEE
T ss_pred             EEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC--CceEEEEcCCCCEEEE
Confidence            99999999999999988999999999999999885554 79999999999998877776543  3899999999988887


Q ss_pred             EeCCC-----ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeC
Q psy17682        319 GFSKM-----SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQT  393 (490)
Q Consensus       319 ~~~~~-----~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~  393 (490)
                      ++...     .++.|++||+.+++.   .....+...+..++|+|+++.++++++.|+.|++||+.+++    .+..+..
T Consensus       271 ~~~~~~~~~~~dg~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~----~~~~~~~  343 (433)
T 3bws_A          271 AQFSASNQESGGGRLGIYSMDKEKL---IDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK----VQKSIPV  343 (433)
T ss_dssp             EEEESCTTCSCCEEEEEEETTTTEE---EEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE----EEEEEEC
T ss_pred             EECCCCccccCCCeEEEEECCCCcE---EeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc----EEEEecC
Confidence            76211     278999999987642   22233345788999999999888888999999999999876    3344456


Q ss_pred             CCceeeEEEeeCceeEEeecc-----------------eeEEEEecCCC
Q psy17682        394 PDPQRGIGMMPKRGCDVNSCE-----------------IGRFFRLNNSG  425 (490)
Q Consensus       394 ~~~i~~~~~sp~~~~l~~~~~-----------------~~~~~~~~~~~  425 (490)
                      ...+.+++|+|++.++++++.                 .+++|++.+++
T Consensus       344 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~  392 (433)
T 3bws_A          344 FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT  392 (433)
T ss_dssp             SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE
T ss_pred             CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc
Confidence            678999999999987766643                 67888887765

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.96  E-value=2.6e-27  Score=229.55  Aligned_cols=314  Identities=11%  Similarity=0.125  Sum_probs=218.8

Q ss_pred             ccceeeeEEeccCCCceEEeee----CCC----eEEEEeC--CCCCCCCCCCccccceeccccceeecccCCCCCccccc
Q psy17682         43 HQRRVGLVLWHPTAQNVLLTAG----KEA----EPILISL--KDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNST  112 (490)
Q Consensus        43 H~~~V~~v~~~p~~~~~l~s~~----~D~----~v~iWd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (490)
                      +...|+...|.+.+..++++|+    .||    +++|||+  .+++....                ..+..     ....
T Consensus        61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~----------------~~~~~-----~~~~  119 (415)
T 2hqs_A           61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ----------------NSYKV-----NKQW  119 (415)
T ss_dssp             SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEE----------------EEEEE-----CGGG
T ss_pred             cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEee----------------eEEEc-----ChhH
Confidence            4578999999999988888886    467    9999999  77651100                00000     0001


Q ss_pred             CCeeEeccc------------cccceEEEEEeeCCC---ceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCC
Q psy17682        113 ANEITISED------------YVKEFKEEIRKLKSQ---QALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHD  177 (490)
Q Consensus       113 v~~~~~s~~------------~~~~~~~~~~~~~~~---g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~  177 (490)
                      +..+++++.            ........+.....+   +.|.+|++..         ...+.+.+|...|.+++|+|+|
T Consensus       120 ~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g---------~~~~~l~~~~~~v~~~~~Spdg  190 (415)
T 2hqs_A          120 LRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG---------YNQFVVHRSPQPLMSPAWSPDG  190 (415)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS---------CSCEEEEEESSCEEEEEECTTS
T ss_pred             HHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC---------CCCEEEeCCCCcceeeEEcCCC
Confidence            111222110            001112222222223   7999999851         2345678899999999999998


Q ss_pred             CCEEEEEeCCC---cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCc--EEEEECCCCeeEE
Q psy17682        178 DNVIASGSEDC---VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNN--VAIWNVGTGEIMI  252 (490)
Q Consensus       178 ~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~--v~iwd~~~~~~~~  252 (490)
                       ++|++++.|+   .|++||+.+++...        +..|...+.+++|+|+|+.++++++.++.  |++||+.+++. .
T Consensus       191 -~~la~~s~~~~~~~i~~~d~~tg~~~~--------l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~  260 (415)
T 2hqs_A          191 -SKLAYVTFESGRSALVIQTLANGAVRQ--------VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-R  260 (415)
T ss_dssp             -SEEEEEECTTSSCEEEEEETTTCCEEE--------EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-E
T ss_pred             -CEEEEEEecCCCcEEEEEECCCCcEEE--------eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-E
Confidence             7899988875   99999999876532        33477889999999999634447766655  99999988775 5


Q ss_pred             EEecCCCcEEEEEEcCCCCEEEEEeC-CC--eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEE
Q psy17682        253 QIECHPDIVYSASWNWDGSKLLTTCK-DK--KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYS  329 (490)
Q Consensus       253 ~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~  329 (490)
                      .+..|...+.+++|+|+|+.|++++. ++  .|++||+.+++.. .+..+.. .+..++|+|+|++|++++.+..+..|+
T Consensus       261 ~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l~~~~~-~~~~~~~spdG~~l~~~~~~~g~~~i~  338 (415)
T 2hqs_A          261 QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RITWEGS-QNQDADVSSDGKFMVMVSSNGGQQHIA  338 (415)
T ss_dssp             ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECCCSSS-EEEEEEECTTSSEEEEEEECSSCEEEE
T ss_pred             eCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-EEecCCC-cccCeEECCCCCEEEEEECcCCceEEE
Confidence            66678889999999999999998886 44  6888899887643 3333433 488899999999998887433357999


Q ss_pred             EecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC---eEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCc
Q psy17682        330 LRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS---VIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKR  406 (490)
Q Consensus       330 iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~  406 (490)
                      +||+.++..    ..+.....+..++|+|+|++|++ ++.++   .|++||+..+.  ...+  ..+...|.+++|+|..
T Consensus       339 ~~d~~~~~~----~~l~~~~~~~~~~~spdg~~l~~-~s~~~~~~~l~~~d~~g~~--~~~l--~~~~~~v~~~~~~~~~  409 (415)
T 2hqs_A          339 KQDLATGGV----QVLSSTFLDETPSLAPNGTMVIY-SSSQGMGSVLNLVSTDGRF--KARL--PATDGQVKFPAWSPYL  409 (415)
T ss_dssp             EEETTTCCE----EECCCSSSCEEEEECTTSSEEEE-EEEETTEEEEEEEETTSCC--EEEC--CCSSSEEEEEEECCCC
T ss_pred             EEECCCCCE----EEecCCCCcCCeEEcCCCCEEEE-EEcCCCccEEEEEECCCCc--EEEe--eCCCCCCcCCcccccc
Confidence            999997653    12222237899999999999854 44444   79999987553  2223  2345689999999975


Q ss_pred             e
Q psy17682        407 G  407 (490)
Q Consensus       407 ~  407 (490)
                      .
T Consensus       410 ~  410 (415)
T 2hqs_A          410 H  410 (415)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.96  E-value=1e-27  Score=218.08  Aligned_cols=182  Identities=7%  Similarity=-0.029  Sum_probs=142.9

Q ss_pred             CCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECC---CCCCEEEEEeCCCcEEEEECCCCCcccccccceee
Q psy17682        134 KSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSP---HDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD  210 (490)
Q Consensus       134 ~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p---~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  210 (490)
                      +.++.|++|.+.    ..++   ....+.+|...+..++|+|   ++ .+|++|+.|++|+|||++++++++.+...   
T Consensus       154 g~d~~V~~~~~s----~dG~---~~~s~~~~~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIWDl~TGk~l~tL~g~---  222 (356)
T 2w18_A          154 LSDQQVEVMTFA----EDGG---GKENQFLMPPEETILTFAEVQGMQ-EALLGTTIMNNIVIWNLKTGQLLKKMHID---  222 (356)
T ss_dssp             STTCEEEEEEEC----TTSC---EEEEEEECCCSSCEEEEEEEETST-TEEEEEETTSEEEEEETTTCCEEEEEECC---
T ss_pred             CCCCcEEEEEEC----CCCc---eeeeeccCCCceeeEEeeccCCCC-ceEEEecCCCcEEEEECCCCcEEEEEcCC---
Confidence            368899999885    3333   3445678999999999998   55 89999999999999999999987775320   


Q ss_pred             ecccccCEEEEEEeeCCCCEE------------EEEeCCCcEEEEECCCCeeEEEE-----ecCCCcEEEEEEcCCCCEE
Q psy17682        211 LLYHQRRVGLVLWHPTAQNVL------------LTAGSDNNVAIWNVGTGEIMIQI-----ECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       211 ~~~~~~~v~~~~~~p~~~~~l------------~s~~~dg~v~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l  273 (490)
                       ..+...+.+++|+|++. ++            ++|+.|++|++||..+++.+..+     .+|...+.+..++  +.++
T Consensus       223 -~~~v~~v~~vafSpdG~-~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~l  298 (356)
T 2w18_A          223 -DSYQASVCHKAYSEMGL-LFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCA  298 (356)
T ss_dssp             -C---CCCEEEEEEETTE-EEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEE
T ss_pred             -CcceeeeEEEEECCCCC-EEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEE
Confidence             01234678889999985 54            67889999999999999987765     3566665555554  8899


Q ss_pred             EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecC
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAP  333 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~  333 (490)
                      ++++.|++|+|||+.+++++.++.+|....+..++|+|+|++|++|+   .|++|+|||+
T Consensus       299 ASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS---~D~TIklWd~  355 (356)
T 2w18_A          299 AAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQ---KDGNIFVYHY  355 (356)
T ss_dssp             EEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEEC---TTSCEEEEEE
T ss_pred             EEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEE---CCCcEEEecC
Confidence            99999999999999999999999988876566799999999999998   7999999985

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.96  E-value=7.2e-27  Score=212.51  Aligned_cols=197  Identities=16%  Similarity=0.206  Sum_probs=146.3

Q ss_pred             ecccCCeeEEEECCCCCCEEEEEe--CCCcEEEEECCC-CCcccccccceeeecccccCEEEEEEee---CCCCEEEEEe
Q psy17682        162 GGHKGPVLDIAWSPHDDNVIASGS--EDCVVKVWQIPD-GGISRTLTEPVVDLLYHQRRVGLVLWHP---TAQNVLLTAG  235 (490)
Q Consensus       162 ~~h~~~V~~~~~~p~~~~~l~s~~--~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p---~~~~~l~s~~  235 (490)
                      .+|...|+++   +++ +++.+++  .|+.|++|++.. ++.+..       +.+|...++.++|+|   +++ +|++++
T Consensus       133 ~g~~~~v~~l---~~g-~lv~ss~~g~d~~V~~~~~s~dG~~~~s-------~~~~~~~v~~l~fs~~~g~~~-~LaSgS  200 (356)
T 2w18_A          133 SGNIKAVLGL---TKR-RLVSSSGTLSDQQVEVMTFAEDGGGKEN-------QFLMPPEETILTFAEVQGMQE-ALLGTT  200 (356)
T ss_dssp             EEEEEEEEEE---TTT-EEEEEESSSTTCEEEEEEECTTSCEEEE-------EEECCCSSCEEEEEEEETSTT-EEEEEE
T ss_pred             CCCeEEEEec---CCC-cEEEecccCCCCcEEEEEECCCCceeee-------eccCCCceeeEEeeccCCCCc-eEEEec
Confidence            4566666665   444 5555543  599999999944 554443       446888899999998   554 999999


Q ss_pred             CCCcEEEEECCCCeeEEEEecCC---CcEEEEEEcCCCCEE------------EEEeCCCeEEEEeCCCCceeeeee---
Q psy17682        236 SDNNVAIWNVGTGEIMIQIECHP---DIVYSASWNWDGSKL------------LTTCKDKKMRIINPRTGAIEEEAV---  297 (490)
Q Consensus       236 ~dg~v~iwd~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l------------~~~~~dg~i~iwd~~~~~~~~~~~---  297 (490)
                      .|++|+|||+++++.+.++.+|.   ..+.+++|+|+|+++            ++|+.|++|++||..+++.+..+.   
T Consensus       201 ~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~  280 (356)
T 2w18_A          201 IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCL  280 (356)
T ss_dssp             TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECC
T ss_pred             CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeec
Confidence            99999999999999999998654   357788999999876            567889999999999998876652   


Q ss_pred             --ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCcee-eeeecCCCCeEEEEecCCCeEE
Q psy17682        298 --CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVM-FPLYDPDTNLVYLCGKGDSVIR  374 (490)
Q Consensus       298 --~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~-~~~~s~~~~~l~~~g~~dg~i~  374 (490)
                        +|... +....+  ++.++++|+   .|++|+|||+.+++....+.  +|...+. .++|+|||++| ++|+.|++|+
T Consensus       281 p~Gh~~~-~lsg~~--sg~~lASgS---~DgTIkIWDl~tGk~l~tL~--gH~~~vvs~vafSPDG~~L-aSGS~D~TIk  351 (356)
T 2w18_A          281 PPGQAGR-FLEGDV--KDHCAAAIL---TSGTIAIWDLLLGQCTALLP--PVSDQHWSFVKWSGTDSHL-LAGQKDGNIF  351 (356)
T ss_dssp             CTTCCCC-EEEEEE--ETTEEEEEE---TTSCEEEEETTTCSEEEEEC--CC--CCCCEEEECSSSSEE-EEECTTSCEE
T ss_pred             cCCCcce-eEcccc--CCCEEEEEc---CCCcEEEEECCCCcEEEEec--CCCCCeEEEEEECCCCCEE-EEEECCCcEE
Confidence              34333 333333  378899998   68999999999877433322  3444444 58999999999 8999999999


Q ss_pred             EEEec
Q psy17682        375 YFEIT  379 (490)
Q Consensus       375 iwd~~  379 (490)
                      |||+.
T Consensus       352 lWd~~  356 (356)
T 2w18_A          352 VYHYS  356 (356)
T ss_dssp             EEEEC
T ss_pred             EecCC
Confidence            99963

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.95  E-value=5.9e-25  Score=219.57  Aligned_cols=335  Identities=11%  Similarity=0.080  Sum_probs=236.0

Q ss_pred             EeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEE
Q psy17682         51 LWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEI  130 (490)
Q Consensus        51 ~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~  130 (490)
                      .|+|++ .++++++.|++|.+||..+++.                  ...+..  +    ..+..++++|+.     ..+
T Consensus       144 ~~~p~~-~~~vs~~~d~~V~v~D~~t~~~------------------~~~i~~--g----~~~~~v~~spdg-----~~l  193 (543)
T 1nir_A          144 DLDLPN-LFSVTLRDAGQIALVDGDSKKI------------------VKVIDT--G----YAVHISRMSASG-----RYL  193 (543)
T ss_dssp             CCCGGG-EEEEEEGGGTEEEEEETTTCCE------------------EEEEEC--S----TTEEEEEECTTS-----CEE
T ss_pred             ccCCCC-EEEEEEcCCCeEEEEECCCceE------------------EEEEec--C----cccceEEECCCC-----CEE
Confidence            388988 8999999999999999988652                  111110  0    125688999996     345


Q ss_pred             EeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECC----CCCCEEEEEe-CCCcEEEEECCCCCcccccc
Q psy17682        131 RKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSP----HDDNVIASGS-EDCVVKVWQIPDGGISRTLT  205 (490)
Q Consensus       131 ~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p----~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~  205 (490)
                      ++++.++.|.+|++..   .+   ...+..+. +...+..++|+|    +| +++++++ .+++|.+||..+++.+..+.
T Consensus       194 ~v~~~d~~V~v~D~~~---~t---~~~~~~i~-~g~~p~~va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t~~~~~~i~  265 (543)
T 1nir_A          194 LVIGRDARIDMIDLWA---KE---PTKVAEIK-IGIEARSVESSKFKGYED-RYTIAGAYWPPQFAIMDGETLEPKQIVS  265 (543)
T ss_dssp             EEEETTSEEEEEETTS---SS---CEEEEEEE-CCSEEEEEEECCSTTCTT-TEEEEEEEESSEEEEEETTTCCEEEEEE
T ss_pred             EEECCCCeEEEEECcC---CC---CcEEEEEe-cCCCcceEEeCCCcCCCC-CEEEEEEccCCeEEEEeccccccceeec
Confidence            5566779999999830   01   12334454 445689999999    99 6777776 58999999999988877654


Q ss_pred             cceeeec---ccc-cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEE--EEecCCCcEEEEEEcCCCCEEEEEe-C
Q psy17682        206 EPVVDLL---YHQ-RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMI--QIECHPDIVYSASWNWDGSKLLTTC-K  278 (490)
Q Consensus       206 ~~~~~~~---~~~-~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~-~  278 (490)
                      .......   .|. ..+..+.++|+++.++++...++.|.+||+.+.+.+.  .+. +...+..++|+|+|+++++++ .
T Consensus       266 ~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~  344 (543)
T 1nir_A          266 TRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANN  344 (543)
T ss_dssp             CCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGG
T ss_pred             ccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecC
Confidence            3211111   133 3789999999887778888889999999998766443  443 566788999999999877655 5


Q ss_pred             CCeEEEEeCCCCceeeeeee----cCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCC----CeEEEec-cCC
Q psy17682        279 DKKMRIINPRTGAIEEEAVC----HEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDE----PIVMVEL-DTS  348 (490)
Q Consensus       279 dg~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~----~~~~~~~-~~~  348 (490)
                      +++|.+||+.+++++..+..    |.+. ... .++|+ +.+++++..  .+++|.+||..+...    ...+..+ .+.
T Consensus       345 ~~~v~v~D~~tg~l~~~i~~g~~ph~g~-g~~-~~~p~~g~~~~s~~~--~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g  420 (543)
T 1nir_A          345 SNKVAVIDSKDRRLSALVDVGKTPHPGR-GAN-FVHPKYGPVWSTSHL--GDGSISLIGTDPKNHPQYAWKKVAELQGQG  420 (543)
T ss_dssp             GTEEEEEETTTTEEEEEEECSSSBCCTT-CEE-EEETTTEEEEEEEBS--SSSEEEEEECCTTTCTTTBTSEEEEEECSC
T ss_pred             CCeEEEEECCCCeEEEeeccCCCCCCCC-Ccc-cCCCCCccEEEeccC--CCceEEEEEeCCCCCchhcCeEEEEEEcCC
Confidence            89999999999998888774    3322 222 25787 666666631  368999999987211    1223333 344


Q ss_pred             CceeeeeecCCCCeEEEEe--c----CCCeEEEEEecCCCCeeEEeee------eeCCCceeeEEEeeCceeEEee----
Q psy17682        349 NGVMFPLYDPDTNLVYLCG--K----GDSVIRYFEITAEPPFVHYINT------FQTPDPQRGIGMMPKRGCDVNS----  412 (490)
Q Consensus       349 ~~i~~~~~s~~~~~l~~~g--~----~dg~i~iwd~~~~~~~~~~~~~------~~~~~~i~~~~~sp~~~~l~~~----  412 (490)
                      .++..++++|++++|++..  .    .++.|.+||+.+.+...+.+..      -.+...+.+++|+|+|..++.+    
T Consensus       421 ~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~  500 (543)
T 1nir_A          421 GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNG  500 (543)
T ss_dssp             SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECC
T ss_pred             CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecC
Confidence            5678899999999996433  1    2679999999998744333311      1235679999999999887744    


Q ss_pred             ---cceeEEEEecCCCceE
Q psy17682        413 ---CEIGRFFRLNNSGLCQ  428 (490)
Q Consensus       413 ---~~~~~~~~~~~~~~~~  428 (490)
                         ++.+.+|+..+++++.
T Consensus       501 ~~~~~~i~v~D~~t~~~~~  519 (543)
T 1nir_A          501 KNDSSALVVVDDKTLKLKA  519 (543)
T ss_dssp             TTSCCEEEEEETTTTEEEE
T ss_pred             CCCCCeEEEEECCCceEEE
Confidence               3678899988887443

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.95  E-value=1.2e-24  Score=217.39  Aligned_cols=310  Identities=14%  Similarity=0.096  Sum_probs=223.7

Q ss_pred             eeeeccCCCCCcEEecc-cccceeeeEEeccCCCceEEeeeCCCeEEEEeC--CCCCCCCCCCccccceeccccceeecc
Q psy17682         25 LTYFSPRTLTEPVVDLL-YHQRRVGLVLWHPTAQNVLLTAGKEAEPILISL--KDGYIPPSEKSKSALKVTKRSNVLDKV  101 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~-gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (490)
                      +..|+..+. +.+.++. ||.  +.+++|+|++ ++|++++.|++|++||+  .++.                  ....+
T Consensus       161 V~v~D~~t~-~~~~~i~~g~~--~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~t~~------------------~~~~i  218 (543)
T 1nir_A          161 IALVDGDSK-KIVKVIDTGYA--VHISRMSASG-RYLLVIGRDARIDMIDLWAKEPT------------------KVAEI  218 (543)
T ss_dssp             EEEEETTTC-CEEEEEECSTT--EEEEEECTTS-CEEEEEETTSEEEEEETTSSSCE------------------EEEEE
T ss_pred             EEEEECCCc-eEEEEEecCcc--cceEEECCCC-CEEEEECCCCeEEEEECcCCCCc------------------EEEEE
Confidence            555665443 3455565 554  8999999999 89999999999999999  4432                  11111


Q ss_pred             cCCCCCcccccCCeeEecc----ccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeec----------cc-C
Q psy17682        102 GGKGGANRNSTANEITISE----DYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGG----------HK-G  166 (490)
Q Consensus       102 ~~~~~~~~~~~v~~~~~s~----~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~----------h~-~  166 (490)
                      ..      ......++|+|    ++  ++  +.++...++.+.+|+..     +.+   .+.++..          |. .
T Consensus       219 ~~------g~~p~~va~sp~~~~dg--~~--l~v~~~~~~~v~v~D~~-----t~~---~~~~i~~~g~~~~~~~~~~~~  280 (543)
T 1nir_A          219 KI------GIEARSVESSKFKGYED--RY--TIAGAYWPPQFAIMDGE-----TLE---PKQIVSTRGMTVDTQTYHPEP  280 (543)
T ss_dssp             EC------CSEEEEEEECCSTTCTT--TE--EEEEEEESSEEEEEETT-----TCC---EEEEEECCEECSSSCCEESCC
T ss_pred             ec------CCCcceEEeCCCcCCCC--CE--EEEEEccCCeEEEEecc-----ccc---cceeecccCcccCccccccCC
Confidence            11      11357889999    75  22  22333458999999874     222   2233322          33 3


Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG  246 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~  246 (490)
                      .+.++.++|++..++++...+++|.+||+.+.+.+...     .+ .+...+.++.|+|+++.+++++..+++|.+||+.
T Consensus       281 ~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~-----~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~  354 (543)
T 1nir_A          281 RVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVT-----SI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSK  354 (543)
T ss_dssp             CEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEE-----EE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETT
T ss_pred             ceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeE-----Ee-ccCcCccCceECCCCCEEEEEecCCCeEEEEECC
Confidence            79999999988788888999999999999877654311     12 2556788999999997445555568999999999


Q ss_pred             CCeeEEEEec----CCCcEEEEEEcCC-CCEEEEEe-CCCeEEEEeCCC-------CceeeeeeecCCCceeEEEEeCCC
Q psy17682        247 TGEIMIQIEC----HPDIVYSASWNWD-GSKLLTTC-KDKKMRIINPRT-------GAIEEEAVCHEGSKATRAIYLKSG  313 (490)
Q Consensus       247 ~~~~~~~~~~----~~~~v~~~~~~~~-~~~l~~~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~s~~~  313 (490)
                      +++++..+..    |.+....+ ++|+ +..++++. .|++|.+||+.+       .++++++..+.+. ...+.++|+|
T Consensus       355 tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~-~~~v~~~pdg  432 (543)
T 1nir_A          355 DRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG-SLFIKTHPKS  432 (543)
T ss_dssp             TTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSC-CCCEECCTTC
T ss_pred             CCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCC-ceEEEcCCCC
Confidence            9999888873    54433333 4777 56666665 589999999998       8889999887664 7889999999


Q ss_pred             cEEEEEeCCC----ceeEEEEecCCCCCCCeEEEec-------cCCCceeeeeecCCCCeEEEEe----cCCCeEEEEEe
Q psy17682        314 LIFTTGFSKM----SERQYSLRAPDHLDEPIVMVEL-------DTSNGVMFPLYDPDTNLVYLCG----KGDSVIRYFEI  378 (490)
Q Consensus       314 ~~l~~~~~~~----~~~~i~iwd~~~~~~~~~~~~~-------~~~~~i~~~~~s~~~~~l~~~g----~~dg~i~iwd~  378 (490)
                      +.|++++...    .++.|.+||+.+.+........       .+...+..+.|+|+|+.++++.    +.|+.|.|||.
T Consensus       433 ~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~  512 (543)
T 1nir_A          433 SHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDD  512 (543)
T ss_dssp             CEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEET
T ss_pred             CcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEEC
Confidence            9999886211    2679999999998866343321       3356799999999999997663    25799999999


Q ss_pred             cCCC
Q psy17682        379 TAEP  382 (490)
Q Consensus       379 ~~~~  382 (490)
                      .+++
T Consensus       513 ~t~~  516 (543)
T 1nir_A          513 KTLK  516 (543)
T ss_dssp             TTTE
T ss_pred             CCce
Confidence            9987

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.94  E-value=1e-24  Score=227.94  Aligned_cols=341  Identities=11%  Similarity=0.007  Sum_probs=219.6

Q ss_pred             cceeeeEEeccCCCceEEeeeC-CC-----eEEEEeCCCCCCCCCCCccccc----eeccccceeecccCCCCCcccccC
Q psy17682         44 QRRVGLVLWHPTAQNVLLTAGK-EA-----EPILISLKDGYIPPSEKSKSAL----KVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        44 ~~~V~~v~~~p~~~~~l~s~~~-D~-----~v~iWd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      ...|.+++|+|+| +.|++++. |+     .|++||+.+++...........    .+...........   .......+
T Consensus        36 ~~~~~~~~~SpdG-~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v  111 (741)
T 2ecf_A           36 GPTLMKPKVAPDG-SRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQ---RIAAMTGI  111 (741)
T ss_dssp             CCCCEEEEECTTS-SEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC-----------------------CCEES
T ss_pred             CCCCCCceEecCC-CEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhh---hhccccCc
Confidence            4579999999999 78888887 88     9999999887521100000000    0000000000000   00001247


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                      ..++|||++  +.   ++.+.. +.+.+|++..     +. ......+..|...+.+++|+|+| ++|+.++. +.|++|
T Consensus       112 ~~~~~SpDg--~~---l~~~~~-~~i~~~d~~~-----~~-~~~~~~l~~~~~~~~~~~~SPDG-~~la~~~~-~~i~~~  177 (741)
T 2ecf_A          112 VDYQWSPDA--QR---LLFPLG-GELYLYDLKQ-----EG-KAAVRQLTHGEGFATDAKLSPKG-GFVSFIRG-RNLWVI  177 (741)
T ss_dssp             CCCEECTTS--SE---EEEEET-TEEEEEESSS-----CS-TTSCCBCCCSSSCEEEEEECTTS-SEEEEEET-TEEEEE
T ss_pred             ceeEECCCC--CE---EEEEeC-CcEEEEECCC-----CC-cceEEEcccCCcccccccCCCCC-CEEEEEeC-CcEEEE
Confidence            899999996  22   222222 8999999852     20 00233456788899999999999 78888874 599999


Q ss_pred             ECCCCCccccccccee-eeccc--------ccCEEEEEEeeCCCCEEEEEeCCC--------------------------
Q psy17682        194 QIPDGGISRTLTEPVV-DLLYH--------QRRVGLVLWHPTAQNVLLTAGSDN--------------------------  238 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~-~~~~~--------~~~v~~~~~~p~~~~~l~s~~~dg--------------------------  238 (490)
                      |+.+++.......... ...++        ...+.+++|+|+|+ .|++++.|+                          
T Consensus       178 d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~-~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~  256 (741)
T 2ecf_A          178 DLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS-AIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAA  256 (741)
T ss_dssp             ETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS-CEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBT
T ss_pred             ecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCC-EEEEEEEcCCCCceEecCCCCCCcccceEeecCCC
Confidence            9988765432211000 00000        01247899999996 677776554                          


Q ss_pred             -------cEEEEECCC-CeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeC-----CCeEEEEeCCCCceeeeeeecCCC-
Q psy17682        239 -------NVAIWNVGT-GEIMIQIE--CHPDIVYSASWNWDGSKLLTTCK-----DKKMRIINPRTGAIEEEAVCHEGS-  302 (490)
Q Consensus       239 -------~v~iwd~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~-  302 (490)
                             .|.+||+.+ ++......  .|...+..++| |||+.|++++.     +..|++||+.+++....+..+... 
T Consensus       257 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~  335 (741)
T 2ecf_A          257 GDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTW  335 (741)
T ss_dssp             TSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSC
T ss_pred             CCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCc
Confidence                   789999988 77654432  36778999999 99999987764     567999999999887766655432 


Q ss_pred             --ceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeee-eecCCCCeEEEEecCCC--eEEEEE
Q psy17682        303 --KATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFP-LYDPDTNLVYLCGKGDS--VIRYFE  377 (490)
Q Consensus       303 --~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~~~g~~dg--~i~iwd  377 (490)
                        .+..++|+|+|++++++.   .++.++||..+....  ......+...+..+ .|+|+|+.|+++++.++  .++||+
T Consensus       336 ~~~~~~~~~spdg~~~~~~~---~~g~~~l~~~~~~~~--~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~  410 (741)
T 2ecf_A          336 VPLHNSLRFLDDGSILWSSE---RTGFQHLYRIDSKGK--AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYA  410 (741)
T ss_dssp             CCCCSCCEECTTSCEEEEEC---TTSSCEEEEECSSSC--EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEE
T ss_pred             CCcCCceEECCCCeEEEEec---CCCccEEEEEcCCCC--eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEE
Confidence              246789999999888776   455555555442222  22222344567776 59999999877787776  899999


Q ss_pred             ecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee
Q psy17682        378 ITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS  412 (490)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~  412 (490)
                      +.........+   .....+..++|+||+..++..
T Consensus       411 ~~~~g~~~~~l---~~~~~~~~~~~spdg~~l~~~  442 (741)
T 2ecf_A          411 VPLQGGQPQRL---SKAPGMHSASFARNASVYVDS  442 (741)
T ss_dssp             EETTCCCCEEC---CCSCSEEEEEECTTSSEEEEE
T ss_pred             EEcCCCCeeec---ccCCCceEEEECCCCCEEEEE
Confidence            97532222233   234568899999999887765

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.93  E-value=5e-24  Score=206.46  Aligned_cols=285  Identities=10%  Similarity=0.033  Sum_probs=201.0

Q ss_pred             cCCeeEeccccccceEEEEEeeCCCc----eEEEECC--CCCCCCcccCCCCc--ceeecccCCeeEEEECC--------
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKSQQ----ALSILPP--PSTAPNTGRINADH--ALVGGHKGPVLDIAWSP--------  175 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~~g----~i~v~~~--~~~~~~~~~~~~~~--~~~~~h~~~V~~~~~~p--------  175 (490)
                      .++...|++........--.....+|    .+++|++  ..     +   +.+  ..+.+|...+..+++++        
T Consensus        64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  135 (415)
T 2hqs_A           64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAP-----G---TVLAQNSYKVNKQWLRYAGHTASDEVFEKL  135 (415)
T ss_dssp             GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSST-----T---CEEEEEEEEECGGGHHHHHHHHHHHHHHHH
T ss_pred             CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCC-----C---CEEeeeEEEcChhHHHHHHHHHHHHHHHHH
Confidence            45666777665332222222234567    8999998  41     1   122  35778888888887764        


Q ss_pred             ------CCCCEEEEEeCC------CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC---cE
Q psy17682        176 ------HDDNVIASGSED------CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN---NV  240 (490)
Q Consensus       176 ------~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg---~v  240 (490)
                            .+ ..++.++.+      +.|++||+..+ ....       +.+|...+.+++|+|+|+ .|++++.++   .|
T Consensus       136 ~g~~~~~~-~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~-------l~~~~~~v~~~~~Spdg~-~la~~s~~~~~~~i  205 (415)
T 2hqs_A          136 TGIKGAFR-TRIAYVVQTNGGQFPYELRVSDYDGY-NQFV-------VHRSPQPLMSPAWSPDGS-KLAYVTFESGRSAL  205 (415)
T ss_dssp             HSSCCCTT-CEEEEEEECSSSSCCEEEEEEETTSC-SCEE-------EEEESSCEEEEEECTTSS-EEEEEECTTSSCEE
T ss_pred             cCCCCcCC-CEEEEEEecCCCCccceEEEEcCCCC-CCEE-------EeCCCCcceeeEEcCCCC-EEEEEEecCCCcEE
Confidence                  14 455555543      79999998643 3332       445889999999999996 888888875   99


Q ss_pred             EEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEE-EEeCCCe--EEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEE
Q psy17682        241 AIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLL-TTCKDKK--MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFT  317 (490)
Q Consensus       241 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~  317 (490)
                      ++||+.+++.. .+..|...+.+++|+|+|+.|+ +++.++.  |++||+++++. ..+..+.. .+..++|+|+|+.|+
T Consensus       206 ~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~-~~~~~~~spdg~~l~  282 (415)
T 2hqs_A          206 VIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRS-NNTEPTWFPDSQNLA  282 (415)
T ss_dssp             EEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSS-CEEEEEECTTSSEEE
T ss_pred             EEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCC-cccceEECCCCCEEE
Confidence            99999988875 4666888999999999999888 5665554  99999998876 44555554 489999999999888


Q ss_pred             EEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecC--CCeEEEEEecCCCCeeEEeeeeeCCC
Q psy17682        318 TGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKG--DSVIRYFEITAEPPFVHYINTFQTPD  395 (490)
Q Consensus       318 ~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~--dg~i~iwd~~~~~~~~~~~~~~~~~~  395 (490)
                      +++.+.....|.+||+.++.. .  ....+...+..++|+|+|++|++++..  +..|++||+.+++.  ..+   ..+.
T Consensus       283 ~~s~~~g~~~i~~~d~~~~~~-~--~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~--~~l---~~~~  354 (415)
T 2hqs_A          283 FTSDQAGRPQVYKVNINGGAP-Q--RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--QVL---SSTF  354 (415)
T ss_dssp             EEECTTSSCEEEEEETTSSCC-E--ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE--EEC---CCSS
T ss_pred             EEECCCCCcEEEEEECCCCCE-E--EEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE--EEe---cCCC
Confidence            887432334788899887652 1  112344568899999999999655544  35899999998862  222   2223


Q ss_pred             ceeeEEEeeCceeEEeecc-----eeEEEEecCCC
Q psy17682        396 PQRGIGMMPKRGCDVNSCE-----IGRFFRLNNSG  425 (490)
Q Consensus       396 ~i~~~~~sp~~~~l~~~~~-----~~~~~~~~~~~  425 (490)
                      .+.+++|+|+|.+++.++.     .+.+|++..+.
T Consensus       355 ~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~  389 (415)
T 2hqs_A          355 LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF  389 (415)
T ss_dssp             SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred             CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc
Confidence            7899999999998776643     35566665443

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.93  E-value=3.7e-23  Score=196.08  Aligned_cols=235  Identities=10%  Similarity=0.069  Sum_probs=175.8

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeee--cccccCEEEEEEeeCCCCEEEEEe--CCCcEEE
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDL--LYHQRRVGLVLWHPTAQNVLLTAG--SDNNVAI  242 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~p~~~~~l~s~~--~dg~v~i  242 (490)
                      .+.+++|+|+|..+++++..++.|.+||..+++....+.......  ......+.+++|+|+++ .+++++  .++.|.+
T Consensus        90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~i~~  168 (353)
T 3vgz_A           90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN-TVYISGIGKESVIWV  168 (353)
T ss_dssp             CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT-EEEEEEESSSCEEEE
T ss_pred             CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC-EEEEEecCCCceEEE
Confidence            356789999985466666778999999999888766543210000  00011278999999996 555544  4789999


Q ss_pred             EECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeec---CCCceeEEEEeCCCcEEEEE
Q psy17682        243 WNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCH---EGSKATRAIYLKSGLIFTTG  319 (490)
Q Consensus       243 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~l~~~  319 (490)
                      ||+.+++.+..+..+...+.+++|+|+++.+++++.++.|.+||+.+++....+...   ....+..++|+|+|+.++++
T Consensus       169 ~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~  248 (353)
T 3vgz_A          169 VDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFIT  248 (353)
T ss_dssp             EETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEE
T ss_pred             EcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEE
Confidence            999999998888756666889999999999999999999999999999888776641   12237789999999977666


Q ss_pred             eCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceee
Q psy17682        320 FSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRG  399 (490)
Q Consensus       320 ~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~  399 (490)
                      ..  .++.|.+||..+++...... ..  . ...++|+|+|++++++...++.|.+||..+++    .+..+..+..+.+
T Consensus       249 ~~--~~~~v~~~d~~~~~~~~~~~-~~--~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~~  318 (353)
T 3vgz_A          249 DS--KAAEVLVVDTRNGNILAKVA-AP--E-SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK----VVKTFDTPTHPNS  318 (353)
T ss_dssp             ES--SSSEEEEEETTTCCEEEEEE-CS--S-CCCEEEETTTTEEEEEETTTTEEEEEETTTTE----EEEEEECCSEEEE
T ss_pred             eC--CCCEEEEEECCCCcEEEEEE-cC--C-CceEEECCCCCEEEEEECCCCeEEEEECCCCe----EEEEEecCCCCCe
Confidence            52  45899999998765432222 22  2 35789999999888888789999999999886    3344455567899


Q ss_pred             EEEeeCceeEEee
Q psy17682        400 IGMMPKRGCDVNS  412 (490)
Q Consensus       400 ~~~sp~~~~l~~~  412 (490)
                      ++|+|++++++.+
T Consensus       319 ~~~s~dg~~l~v~  331 (353)
T 3vgz_A          319 LALSADGKTLYVS  331 (353)
T ss_dssp             EEECTTSCEEEEE
T ss_pred             EEEcCCCCEEEEE
Confidence            9999999865544

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.93  E-value=1.1e-22  Score=191.20  Aligned_cols=284  Identities=9%  Similarity=0.071  Sum_probs=197.7

Q ss_pred             EEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEE
Q psy17682         50 VLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEE  129 (490)
Q Consensus        50 v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~  129 (490)
                      ..|.+++..++++++.++.|.+||..+++...                  .... +    .... .++|+|+..    .+
T Consensus         3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~------------------~~~~-~----~~~~-~~~~s~dg~----~l   54 (331)
T 3u4y_A            3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILN------------------QITL-G----YDFV-DTAITSDCS----NV   54 (331)
T ss_dssp             ----CCCCEEEEEEGGGTEEEEEETTTCCEEE------------------EEEC-C----CCEE-EEEECSSSC----EE
T ss_pred             eeEcCCCCEEEEEecCCCeEEEEeCcccceee------------------eEEc-c----CCcc-eEEEcCCCC----EE
Confidence            35667776789999999999999998865211                  1110 0    1123 789999862    24


Q ss_pred             EEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC---cEEEEECCCCCccccccc
Q psy17682        130 IRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC---VVKVWQIPDGGISRTLTE  206 (490)
Q Consensus       130 ~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~  206 (490)
                      +++...++.+.+|++.     .++.  ....+..+..+..+++|+|+| ++++++..++   .|.+||+.+++.+..+. 
T Consensus        55 ~~~~~~~~~i~~~d~~-----~~~~--~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~-  125 (331)
T 3u4y_A           55 VVTSDFCQTLVQIETQ-----LEPP--KVVAIQEGQSSMADVDITPDD-QFAVTVTGLNHPFNMQSYSFLKNKFISTIP-  125 (331)
T ss_dssp             EEEESTTCEEEEEECS-----SSSC--EEEEEEECSSCCCCEEECTTS-SEEEECCCSSSSCEEEEEETTTTEEEEEEE-
T ss_pred             EEEeCCCCeEEEEECC-----CCce--eEEecccCCCCccceEECCCC-CEEEEecCCCCcccEEEEECCCCCeEEEEE-
Confidence            4556668899999985     2221  144556677777669999998 7777555553   89999998887655432 


Q ss_pred             ceeeecccccCEEEEEEeeCCCCEEEEEeCCCc-EEEEECCCCeeE----EEEecCCCcEEEEEEcCCCCEEEEEe-CCC
Q psy17682        207 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNN-VAIWNVGTGEIM----IQIECHPDIVYSASWNWDGSKLLTTC-KDK  280 (490)
Q Consensus       207 ~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~-v~iwd~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg  280 (490)
                             +.....+++|+|+++.++++...++. |.+|++.....+    ............++|+|+|+++++++ .++
T Consensus       126 -------~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~  198 (331)
T 3u4y_A          126 -------IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGN  198 (331)
T ss_dssp             -------CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTT
T ss_pred             -------CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCC
Confidence                   34457899999999766677677788 999998754332    11223456689999999999665554 689


Q ss_pred             eEEEEeCCCCce---eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc-C----CC---
Q psy17682        281 KMRIINPRTGAI---EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD-T----SN---  349 (490)
Q Consensus       281 ~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~-~----~~---  349 (490)
                      .|++||+.+++.   +..+...  ..+..++|+|+|++++++..  .++.|.+||+.+++... ..... .    ..   
T Consensus       199 ~v~v~d~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~--~~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~  273 (331)
T 3u4y_A          199 SIGILETQNPENITLLNAVGTN--NLPGTIVVSRDGSTVYVLTE--STVDVFNFNQLSGTLSF-VKSFGHGLLIDPRPLF  273 (331)
T ss_dssp             EEEEEECSSTTSCEEEEEEECS--SCCCCEEECTTSSEEEEECS--SEEEEEEEETTTTEEEE-EEEEECCCCCCCGGGT
T ss_pred             eEEEEECCCCcccceeeeccCC--CCCceEEECCCCCEEEEEEc--CCCEEEEEECCCCceee-ecccccccccCCCCcc
Confidence            999999999887   6666543  23788999999997766542  47889999998754311 11111 1    11   


Q ss_pred             ceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        350 GVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       350 ~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      ....++|+|+|++|++++..++.|.+||+....
T Consensus       274 ~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~  306 (331)
T 3u4y_A          274 GANQMALNKTETKLFISANISRELKVFTISGKV  306 (331)
T ss_dssp             TCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred             cccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence            124589999999998888888899999998753

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.93  E-value=3.9e-24  Score=222.98  Aligned_cols=332  Identities=10%  Similarity=0.029  Sum_probs=212.3

Q ss_pred             eeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccc
Q psy17682         46 RVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKE  125 (490)
Q Consensus        46 ~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~  125 (490)
                      .+.+++|+|++ .++++ +.||+|++||+.+++...                ..  .....  ....+..++|||++  +
T Consensus        18 ~~~~~~~spdg-~~~~~-~~dg~i~~~d~~~g~~~~----------------~~--~~~~~--~~~~v~~~~~SpDg--~   73 (723)
T 1xfd_A           18 HDPEAKWISDT-EFIYR-EQKGTVRLWNVETNTSTV----------------LI--EGKKI--ESLRAIRYEISPDR--E   73 (723)
T ss_dssp             CCCCCCBSSSS-CBCCC-CSSSCEEEBCGGGCCCEE----------------EE--CTTTT--TTTTCSEEEECTTS--S
T ss_pred             cccccEEcCCC-cEEEE-eCCCCEEEEECCCCcEEE----------------Ee--ccccc--cccccceEEECCCC--C
Confidence            47789999999 56666 789999999998875211                11  11000  01147899999996  3


Q ss_pred             eEEEEEee------CCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682        126 FKEEIRKL------KSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG  199 (490)
Q Consensus       126 ~~~~~~~~------~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~  199 (490)
                      ++......      ..++.+.+|++.     .++. ..+....+|...+..++|+|+| +.|+.++. +.|++||+.+++
T Consensus        74 ~l~~~~~~~~~~~~~~~~~i~~~d~~-----~~~~-~~l~~~~~~~~~~~~~~~SPdG-~~la~~~~-~~i~~~~~~~g~  145 (723)
T 1xfd_A           74 YALFSYNVEPIYQHSYTGYYVLSKIP-----HGDP-QSLDPPEVSNAKLQYAGWGPKG-QQLIFIFE-NNIYYCAHVGKQ  145 (723)
T ss_dssp             EEEEEESCCCCSSSCCCSEEEEEESS-----SCCC-EECCCTTCCSCCCSBCCBCSST-TCEEEEET-TEEEEESSSSSC
T ss_pred             EEEEEecCccceeecceeeEEEEECC-----CCce-EeccCCccccccccccEECCCC-CEEEEEEC-CeEEEEECCCCc
Confidence            22222111      113789999985     2221 1122234566679999999999 77888775 799999998876


Q ss_pred             ccccccccee--eecccc---------cCEEEEEEeeCCCCEEEEEeCCC------------------------------
Q psy17682        200 ISRTLTEPVV--DLLYHQ---------RRVGLVLWHPTAQNVLLTAGSDN------------------------------  238 (490)
Q Consensus       200 ~~~~~~~~~~--~~~~~~---------~~v~~~~~~p~~~~~l~s~~~dg------------------------------  238 (490)
                      ..........  .+.++.         ..+.+++|+|+|+ .|++++.|+                              
T Consensus       146 ~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~-~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~  224 (723)
T 1xfd_A          146 AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGT-RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSE  224 (723)
T ss_dssp             CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSS-EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSC
T ss_pred             eEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCC-EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCC
Confidence            6443221000  000010         1337899999996 777776543                              


Q ss_pred             ----cEEEEECCCCeeEEEEecC------CCcEEEEEEcCCCCEEEEEeC----CCeEEEEeCCCCceeeeeeecCCCce
Q psy17682        239 ----NVAIWNVGTGEIMIQIECH------PDIVYSASWNWDGSKLLTTCK----DKKMRIINPRTGAIEEEAVCHEGSKA  304 (490)
Q Consensus       239 ----~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~  304 (490)
                          .|++||+.+++....+..+      ...+..++|+|||+++++.+.    +..|++||+.+++....+..+....+
T Consensus       225 ~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~  304 (723)
T 1xfd_A          225 NPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWL  304 (723)
T ss_dssp             CCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCC
T ss_pred             CCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEE
Confidence                7999999988765666543      567899999999998877653    35799999999987766554322222


Q ss_pred             ----eEEEEeCCCcEEEEE-eCCCc----eeEEEEec-CCCCCC--CeEEEeccCCCceee-eeecCCCCeEEEEecCC-
Q psy17682        305 ----TRAIYLKSGLIFTTG-FSKMS----ERQYSLRA-PDHLDE--PIVMVELDTSNGVMF-PLYDPDTNLVYLCGKGD-  370 (490)
Q Consensus       305 ----~~~~~s~~~~~l~~~-~~~~~----~~~i~iwd-~~~~~~--~~~~~~~~~~~~i~~-~~~s~~~~~l~~~g~~d-  370 (490)
                          ..++|+|||+.|+.. ++...    ...|.+|| ......  ...+.  .+...+.. ++|+|||+.|++++..+ 
T Consensus       305 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~--~~~~~~~~~~~~spdg~~l~~~~~~~~  382 (723)
T 1xfd_A          305 HRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT--SGDWDVTKILAYDEKGNKIYFLSTEDL  382 (723)
T ss_dssp             CCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSC--CSSSCEEEEEEEETTTTEEEEEESSSC
T ss_pred             eccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEee--cCCeEEEeeeEEcCCCCEEEEEEcCCC
Confidence                378999999977654 32111    23678888 343320  22211  12233444 68999999997777666 


Q ss_pred             -CeEEEEEecCCCC-eeEEeee-eeCCCceeeEEEeeCceeEEee
Q psy17682        371 -SVIRYFEITAEPP-FVHYINT-FQTPDPQRGIGMMPKRGCDVNS  412 (490)
Q Consensus       371 -g~i~iwd~~~~~~-~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~  412 (490)
                       +.+++|++..... ....+.. +.+...+..++|+|||+.++..
T Consensus       383 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~  427 (723)
T 1xfd_A          383 PRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK  427 (723)
T ss_dssp             TTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred             CcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEE
Confidence             8899999975431 1112211 1134568899999999887765

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.93  E-value=8.4e-23  Score=192.66  Aligned_cols=277  Identities=13%  Similarity=0.133  Sum_probs=190.3

Q ss_pred             EEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCC-CcEEEEECC--CCCccccccc
Q psy17682        130 IRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSED-CVVKVWQIP--DGGISRTLTE  206 (490)
Q Consensus       130 ~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~d-g~i~iwd~~--~~~~~~~~~~  206 (490)
                      +++...++.|.+|++.    ..+.. ..... ..|...+.+++|+|++ .+|++++.+ +.|++|++.  +++...    
T Consensus         8 ~~~~~~~~~v~~~~~~----~~~~~-~~~~~-~~~~~~~~~~~~spdg-~~l~~~~~~~~~v~~~~~~~~~~~~~~----   76 (343)
T 1ri6_A            8 YIASPESQQIHVWNLN----HEGAL-TLTQV-VDVPGQVQPMVVSPDK-RYLYVGVRPEFRVLAYRIAPDDGALTF----   76 (343)
T ss_dssp             EEEEGGGTEEEEEEEC----TTSCE-EEEEE-EECSSCCCCEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEEE----
T ss_pred             EEeCCCCCeEEEEEEC----CCCcE-EEeee-EecCCCCceEEECCCC-CEEEEeecCCCeEEEEEecCCCCceee----
Confidence            4444779999999885    22221 11222 3577889999999998 677777766 999999997  444221    


Q ss_pred             ceeeecccccCEEEEEEeeCCCCEEEEEe-CCCcEEEEECC---CCeeEEEEecCCCcEEEEEEcCCCCEEEEEe-CCCe
Q psy17682        207 PVVDLLYHQRRVGLVLWHPTAQNVLLTAG-SDNNVAIWNVG---TGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KDKK  281 (490)
Q Consensus       207 ~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~dg~v~iwd~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~  281 (490)
                       ...+..+ ..+.+++|+|+++ .+++++ .++.|.+||+.   ..+.+..+. ....+.+++|+|+++++++++ .++.
T Consensus        77 -~~~~~~~-~~~~~~~~s~dg~-~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~  152 (343)
T 1ri6_A           77 -AAESALP-GSLTHISTDHQGQ-FVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDR  152 (343)
T ss_dssp             -EEEEECS-SCCSEEEECTTSS-EEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTE
T ss_pred             -ccccccC-CCCcEEEEcCCCC-EEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCE
Confidence             1112223 3788999999996 555544 58899999994   344555555 344688999999999888887 8999


Q ss_pred             EEEEeCCC-Cceee----eeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC-CeEEEe---ccC----C
Q psy17682        282 MRIINPRT-GAIEE----EAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE-PIVMVE---LDT----S  348 (490)
Q Consensus       282 i~iwd~~~-~~~~~----~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~-~~~~~~---~~~----~  348 (490)
                      |++||+.+ ++...    ....+.+..+..++|+|+|++++++..  .++.+.+|++..... ......   ...    .
T Consensus       153 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~--~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~  230 (343)
T 1ri6_A          153 ICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE--LNSSVDVWELKDPHGNIECVQTLDMMPENFSDT  230 (343)
T ss_dssp             EEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEET--TTTEEEEEESSCTTSCCEEEEEEECSCTTCCSC
T ss_pred             EEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeC--CCCEEEEEEecCCCCcEEEEeeccccCcccccc
Confidence            99999987 55432    233333445888999999996655442  478999999964221 111111   111    2


Q ss_pred             CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec---ceeEEEEecC
Q psy17682        349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC---EIGRFFRLNN  423 (490)
Q Consensus       349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~---~~~~~~~~~~  423 (490)
                      ..+..++|+|+|++|++++..++.|.+||+.........+........+.+++|+|++.++++++   +.+.+|+++.
T Consensus       231 ~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~  308 (343)
T 1ri6_A          231 RWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG  308 (343)
T ss_dssp             CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred             CCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence            34667999999999987888899999999984221233444444444589999999998766654   4788997663

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.92  E-value=6.1e-23  Score=193.59  Aligned_cols=310  Identities=10%  Similarity=0.046  Sum_probs=197.5

Q ss_pred             ceEEeeeCCCeEEEEeCCC-CCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEEEeeCCC
Q psy17682         58 NVLLTAGKEAEPILISLKD-GYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQ  136 (490)
Q Consensus        58 ~~l~s~~~D~~v~iWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~  136 (490)
                      .++++++.|+.|++|++.. +..                .......      ....+..++|+|+.  ++  +++....+
T Consensus         6 ~l~~~~~~~~~v~~~~~~~~~~~----------------~~~~~~~------~~~~~~~~~~spdg--~~--l~~~~~~~   59 (343)
T 1ri6_A            6 TVYIASPESQQIHVWNLNHEGAL----------------TLTQVVD------VPGQVQPMVVSPDK--RY--LYVGVRPE   59 (343)
T ss_dssp             EEEEEEGGGTEEEEEEECTTSCE----------------EEEEEEE------CSSCCCCEEECTTS--SE--EEEEETTT
T ss_pred             EEEEeCCCCCeEEEEEECCCCcE----------------EEeeeEe------cCCCCceEEECCCC--CE--EEEeecCC
Confidence            4566668899999999863 220                0111111      12247789999985  21  23334445


Q ss_pred             ceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE-eCCCcEEEEECCCCCcccccccceeeecccc
Q psy17682        137 QALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG-SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQ  215 (490)
Q Consensus       137 g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  215 (490)
                      +.+.+|++...   .++ ......+..+. .+.+++|+|++ ++++++ ..++.|.+||+.++....    ....+. ..
T Consensus        60 ~~v~~~~~~~~---~~~-~~~~~~~~~~~-~~~~~~~s~dg-~~l~~~~~~~~~i~~~d~~~~~~~~----~~~~~~-~~  128 (343)
T 1ri6_A           60 FRVLAYRIAPD---DGA-LTFAAESALPG-SLTHISTDHQG-QFVFVGSYNAGNVSVTRLEDGLPVG----VVDVVE-GL  128 (343)
T ss_dssp             TEEEEEEECTT---TCC-EEEEEEEECSS-CCSEEEECTTS-SEEEEEETTTTEEEEEEEETTEEEE----EEEEEC-CC
T ss_pred             CeEEEEEecCC---CCc-eeeccccccCC-CCcEEEEcCCC-CEEEEEecCCCeEEEEECCCCcccc----cccccc-CC
Confidence            99999988511   111 11223333333 78999999998 555554 458899999985332111    111122 33


Q ss_pred             cCEEEEEEeeCCCCEEEEEe-CCCcEEEEECCC-CeeEE----EEec-CCCcEEEEEEcCCCCEEEEEe-CCCeEEEEeC
Q psy17682        216 RRVGLVLWHPTAQNVLLTAG-SDNNVAIWNVGT-GEIMI----QIEC-HPDIVYSASWNWDGSKLLTTC-KDKKMRIINP  287 (490)
Q Consensus       216 ~~v~~~~~~p~~~~~l~s~~-~dg~v~iwd~~~-~~~~~----~~~~-~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~  287 (490)
                      ..+.+++|+|+++ .+++++ .++.|.+||+.+ ++...    .+.. ....+..++|+|+++++++++ .++.|++||+
T Consensus       129 ~~~~~~~~s~dg~-~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~  207 (343)
T 1ri6_A          129 DGCHSANISPDNR-TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWEL  207 (343)
T ss_dssp             TTBCCCEECTTSS-EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEES
T ss_pred             CCceEEEECCCCC-EEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEe
Confidence            4588999999996 566665 889999999987 65432    2232 345788999999999776555 7899999999


Q ss_pred             CC--Cce--eeeeeec----C-CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC-CCeEEEeccCCCceeeeeec
Q psy17682        288 RT--GAI--EEEAVCH----E-GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD-EPIVMVELDTSNGVMFPLYD  357 (490)
Q Consensus       288 ~~--~~~--~~~~~~~----~-~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~-~~~~~~~~~~~~~i~~~~~s  357 (490)
                      ..  ++.  .......    . ...+..++|+|+|++|+++..  .++.|.+||+.... .............+..++|+
T Consensus       208 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~--~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s  285 (343)
T 1ri6_A          208 KDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDR--TASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVD  285 (343)
T ss_dssp             SCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEET--TTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEEC
T ss_pred             cCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEec--CCCEEEEEEEcCCCCceEEeeeecCCCccceEEEC
Confidence            54  432  2222211    1 123668999999987765442  47899999998422 12222233333448899999


Q ss_pred             CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce
Q psy17682        358 PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG  407 (490)
Q Consensus       358 ~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~  407 (490)
                      |+|++|++++..++.|.+|++.......+.+..+..+....+++|.|+..
T Consensus       286 ~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~  335 (343)
T 1ri6_A          286 HSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEG  335 (343)
T ss_dssp             TTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC-
T ss_pred             CCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEcccC
Confidence            99999977666889999997764322234455555555678888888643

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.92  E-value=3.5e-22  Score=187.65  Aligned_cols=275  Identities=12%  Similarity=0.068  Sum_probs=191.4

Q ss_pred             EEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCc-ccccccc
Q psy17682        129 EIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGI-SRTLTEP  207 (490)
Q Consensus       129 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~  207 (490)
                      .+++...++.|.+|+..     .++   ....+..+...+ +++|+|++..+++++..++.|.+||+.+++. ...    
T Consensus        12 ~~v~~~~~~~v~~~d~~-----~~~---~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~----   78 (331)
T 3u4y_A           12 GIVVEQHLRRISFFSTD-----TLE---ILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVA----   78 (331)
T ss_dssp             EEEEEGGGTEEEEEETT-----TCC---EEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEE----
T ss_pred             EEEEecCCCeEEEEeCc-----ccc---eeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEe----
Confidence            45667788999999985     222   233444555666 9999999843445555589999999988875 332    


Q ss_pred             eeeecccccCEEEEEEeeCCCCEEEEEeCCC---cEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEE-eCCCe-E
Q psy17682        208 VVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN---NVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTT-CKDKK-M  282 (490)
Q Consensus       208 ~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg---~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~-i  282 (490)
                         +..+..+..+++|+|+++ +++++..++   .|.+||+.+++.+..+.. .....+++|+|+|++++++ ..++. |
T Consensus        79 ---~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i  153 (331)
T 3u4y_A           79 ---IQEGQSSMADVDITPDDQ-FAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTV  153 (331)
T ss_dssp             ---EEECSSCCCCEEECTTSS-EEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEE
T ss_pred             ---cccCCCCccceEECCCCC-EEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceE
Confidence               223455555599999996 677554442   899999999998888774 4567999999999865555 55578 9


Q ss_pred             EEEeCCCCceeeee---eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCC
Q psy17682        283 RIINPRTGAIEEEA---VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPD  359 (490)
Q Consensus       283 ~iwd~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~  359 (490)
                      .+|++.....+...   ....+..+..++|+|+|++++++..  .++.|.+||+.+++.............+..++|+|+
T Consensus       154 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~--~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spd  231 (331)
T 3u4y_A          154 RRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANL--IGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRD  231 (331)
T ss_dssp             EEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEET--TTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTT
T ss_pred             EEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeC--CCCeEEEEECCCCcccceeeeccCCCCCceEEECCC
Confidence            99999864433111   1122334889999999986655442  478999999987665222334445567889999999


Q ss_pred             CCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeC-----CCc---eeeEEEeeCceeEEee---cceeEEEEecCCC
Q psy17682        360 TNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQT-----PDP---QRGIGMMPKRGCDVNS---CEIGRFFRLNNSG  425 (490)
Q Consensus       360 ~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~---i~~~~~sp~~~~l~~~---~~~~~~~~~~~~~  425 (490)
                      |++++++...++.|.+||+.+++.  ..+..+..     ..+   ..+++|+|+++.++.+   ++.+.+|++....
T Consensus       232 g~~l~v~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~  306 (331)
T 3u4y_A          232 GSTVYVLTESTVDVFNFNQLSGTL--SFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV  306 (331)
T ss_dssp             SSEEEEECSSEEEEEEEETTTTEE--EEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred             CCEEEEEEcCCCEEEEEECCCCce--eeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence            999877777788999999998762  11222211     112   3558999999876544   3378899987654

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.92  E-value=7.1e-23  Score=212.82  Aligned_cols=339  Identities=10%  Similarity=0.050  Sum_probs=212.4

Q ss_pred             eeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCC-CCCCccccceeccccceeecccCCC--CCcccccCCeeEecccc
Q psy17682         46 RVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIP-PSEKSKSALKVTKRSNVLDKVGGKG--GANRNSTANEITISEDY  122 (490)
Q Consensus        46 ~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~~  122 (490)
                      .+..+.|.  + ..+++++.|+ | +||+.+++.. ...        .........+....  .......+..++|||+.
T Consensus        27 ~~~~~~w~--g-~~~~~~~~~~-i-~~d~~tg~~~~~~l--------~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~   93 (706)
T 2z3z_A           27 YVVGLQWM--G-DNYVFIEGDD-L-VFNKANGKSAQTTR--------FSAADLNALMPEGCKFQTTDAFPSFRTLDAGRG   93 (706)
T ss_dssp             -CTTCEEE--T-TEEEEEETTE-E-EEEC-------CEE--------EEHHHHHTTC-----------CCCEEEEETTTT
T ss_pred             cCCCCcCc--C-CeEEEEeCCc-E-EEECCCCcEeeEEe--------echhHhhhhccchhccccccccCceeEEECCCC
Confidence            46778888  5 4566677777 8 9999987631 100        00000000000000  00111358899999982


Q ss_pred             ccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCC-----
Q psy17682        123 VKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPD-----  197 (490)
Q Consensus       123 ~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-----  197 (490)
                        .   ++.+  .++.+.+|++.     .++    ...+..|...+.+++|+|+| +.|+++ .|+.|++|++.+     
T Consensus        94 --~---~~~~--~~~~i~~~d~~-----~~~----~~~l~~~~~~~~~~~~SpdG-~~la~~-~~~~i~v~~~~~~~~~~  155 (706)
T 2z3z_A           94 --L---VVLF--TQGGLVGFDML-----ARK----VTYLFDTNEETASLDFSPVG-DRVAYV-RNHNLYIARGGKLGEGM  155 (706)
T ss_dssp             --E---EEEE--ETTEEEEEETT-----TTE----EEEEECCTTCCTTCEECTTS-SEEEEE-ETTEEEEEECBCTTSCC
T ss_pred             --e---EEEE--ECCEEEEEECC-----CCc----eEEccCCcccccCCcCCCCC-CEEEEE-ECCeEEEEecCcccccC
Confidence              2   2222  34999999985     222    23445677889999999999 778775 679999999988     


Q ss_pred             CCccccccccee-------eecccccCEEEEEEeeCCCCEEEEEe---------------------------------CC
Q psy17682        198 GGISRTLTEPVV-------DLLYHQRRVGLVLWHPTAQNVLLTAG---------------------------------SD  237 (490)
Q Consensus       198 ~~~~~~~~~~~~-------~~~~~~~~v~~~~~~p~~~~~l~s~~---------------------------------~d  237 (490)
                      ++..........       ....+...+.++.|+|+|+ .|++++                                 .+
T Consensus       156 g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~  234 (706)
T 2z3z_A          156 SRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS-CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH  234 (706)
T ss_dssp             CCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS-EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred             CCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC-EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence            665432211000       0000112258999999996 777776                                 44


Q ss_pred             CcEEEEECCCCeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCceeeeee-ecCCC---ceeE
Q psy17682        238 NNVAIWNVGTGEIMIQIE--CHPDIVYSASWNWDGSKLLTTCKDK-----KMRIINPRTGAIEEEAV-CHEGS---KATR  306 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~-~~~~~---~~~~  306 (490)
                      ..|.+||+.+++......  .|...+.+++|+|||+.|++++.++     .|++||+.+++....+. .....   .+..
T Consensus       235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~  314 (706)
T 2z3z_A          235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP  314 (706)
T ss_dssp             EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred             eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence            679999999887654432  4667799999999999999988775     89999999984444333 22211   1357


Q ss_pred             EEEeC--CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceee-eeecCCCCeEEEEecCCC----eEEEEEec
Q psy17682        307 AIYLK--SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMF-PLYDPDTNLVYLCGKGDS----VIRYFEIT  379 (490)
Q Consensus       307 ~~~s~--~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~g~~dg----~i~iwd~~  379 (490)
                      +.|+|  +|++++++.   .++.+++|+++....... ....+...+.. ++|+|+|+.|+++++.++    .|+.||+.
T Consensus       315 ~~~sp~~dg~~l~~~~---~~g~~~l~~~~~~~~~~~-~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~  390 (706)
T 2z3z_A          315 LTFLPGSNNQFIWQSR---RDGWNHLYLYDTTGRLIR-QVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK  390 (706)
T ss_dssp             CEECTTCSSEEEEEEC---TTSSCEEEEEETTSCEEE-ECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred             ceeecCCCCEEEEEEc---cCCccEEEEEECCCCEEE-ecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence            89999  999888886   456677776652221111 11233445665 799999999977777765    66666666


Q ss_pred             CCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc------eeEEEEecCCC
Q psy17682        380 AEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE------IGRFFRLNNSG  425 (490)
Q Consensus       380 ~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~------~~~~~~~~~~~  425 (490)
                      +++  ...+   .+...+.+++|+|||++++..+.      .+.+|++.++.
T Consensus       391 ~~~--~~~l---~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~  437 (706)
T 2z3z_A          391 GGK--TKDL---TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS  437 (706)
T ss_dssp             CCC--CEES---CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred             CCC--ceec---cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence            654  2222   34557899999999987775522      36788877654

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.91  E-value=1.3e-22  Score=219.43  Aligned_cols=350  Identities=10%  Similarity=0.024  Sum_probs=234.1

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCC------CeEEEEeCCCCCCCCCCCccccceecccccee
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKE------AEPILISLKDGYIPPSEKSKSALKVTKRSNVL   98 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D------~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~   98 (490)
                      +..++..  ......+.+|...|.+++|||+| +.|++++.+      ..|.+|++.++...         .+.......
T Consensus        35 l~~~~~~--gg~~~~lt~~~~~v~~~~~SPDG-~~la~~s~~~~~~~~~~i~~~d~~~g~~~---------~lt~~~~~~  102 (1045)
T 1k32_A           35 LWEHDLK--SGSTRKIVSNLGVINNARFFPDG-RKIAIRVMRGSSLNTADLYFYNGENGEIK---------RITYFSGKS  102 (1045)
T ss_dssp             EEEEETT--TCCEEEEECSSSEEEEEEECTTS-SEEEEEEEESTTCCEEEEEEEETTTTEEE---------ECCCCCEEE
T ss_pred             EEEEECC--CCcEEEeeeCCCcccCeEECCCC-CEEEEEEeeccCCCCCeEEEEECCCCCeE---------EcccCCCcc
Confidence            4445543  34567788999999999999999 777766543      48999998875410         000000000


Q ss_pred             ecccCCCCCcccccCCeeEeccccccceEEEEEeeCC------CceEEEECCCCCCCCc---c-----------------
Q psy17682         99 DKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKS------QQALSILPPPSTAPNT---G-----------------  152 (490)
Q Consensus        99 ~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~------~g~i~v~~~~~~~~~~---~-----------------  152 (490)
                              ..+...+..++|||++  +   +++++..      ...+.+|++.......   .                 
T Consensus       103 --------~~~~~~~~~~~~SpDg--~---ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~  169 (1045)
T 1k32_A          103 --------TGRRMFTDVAGFDPDG--N---LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRN  169 (1045)
T ss_dssp             --------ETTEECSEEEEECTTC--C---EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEES
T ss_pred             --------cccccccccccCCCCC--E---EEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEecc
Confidence                    0011234678888886  2   3333332      2345555543211000   0                 


Q ss_pred             ----------------c-----CCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCC-CCcccccccceee
Q psy17682        153 ----------------R-----INADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPD-GGISRTLTEPVVD  210 (490)
Q Consensus       153 ----------------~-----~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~  210 (490)
                                      +     .......+.+|.+.+.++.|+++  .++++++.|+.++||.+.. +.....       
T Consensus       170 ~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d--~l~~~~~~dg~~~l~~~~~~g~~~~~-------  240 (1045)
T 1k32_A          170 TFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH--RIYFITDIDGFGQIYSTDLDGKDLRK-------  240 (1045)
T ss_dssp             CSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT--EEEEEECTTSSCEEEEEETTSCSCEE-------
T ss_pred             CCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC--EEEEEEeccCceEEEEEeCCCCcceE-------
Confidence                            0     00122344689999999999985  5778888899999998753 322222       


Q ss_pred             ecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec-----------CCCcEEEEEEc-CCCCEEEEEeC
Q psy17682        211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-----------HPDIVYSASWN-WDGSKLLTTCK  278 (490)
Q Consensus       211 ~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~l~~~~~  278 (490)
                      +..|. .+..++|+|+|+ .++.+ .++.|.+||+...+ +..+..           |...+.+++|+ |+|+.|++++ 
T Consensus       241 l~~~~-~~~~~~~SpDG~-~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-  315 (1045)
T 1k32_A          241 HTSFT-DYYPRHLNTDGR-RILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-  315 (1045)
T ss_dssp             CCCCC-SSCEEEEEESSS-CEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-
T ss_pred             ecCCC-CcceeeEcCCCC-EEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-
Confidence            22243 456779999996 56666 48999999995443 345543           23368899999 9999999888 


Q ss_pred             CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEE-EecCCCCCCCeEEEeccCCCceeeeeec
Q psy17682        279 DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYS-LRAPDHLDEPIVMVELDTSNGVMFPLYD  357 (490)
Q Consensus       279 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~-iwd~~~~~~~~~~~~~~~~~~i~~~~~s  357 (490)
                      ++.+++|++..++... +..+....+..++|+ +|+.++.+++   +..+. +|++..... . .. ..+...+..++|+
T Consensus       316 ~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~---~~~l~~~~d~~~~~~-~-~l-~~~~~~~~~~~~S  387 (1045)
T 1k32_A          316 RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTR---EGDFLGIYDYRTGKA-E-KF-EENLGNVFAMGVD  387 (1045)
T ss_dssp             TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEET---TEEEEEEEETTTCCE-E-EC-CCCCCSEEEEEEC
T ss_pred             cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CCCeEEEEEC---CCceEEEEECCCCCc-e-Ee-cCCccceeeeEEC
Confidence            7899999998876543 444544248899999 9999998873   66788 999886542 1 11 2455678999999


Q ss_pred             CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc------------eeEEEEecCCC
Q psy17682        358 PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE------------IGRFFRLNNSG  425 (490)
Q Consensus       358 ~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~------------~~~~~~~~~~~  425 (490)
                      |||++| ++++.++.|++||+.+++. .....  .+...+.+++|||||++++.+..            .+++|++.++.
T Consensus       388 pDG~~l-a~~~~~~~v~~~d~~tg~~-~~~~~--~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~  463 (1045)
T 1k32_A          388 RNGKFA-VVANDRFEIMTVDLETGKP-TVIER--SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK  463 (1045)
T ss_dssp             TTSSEE-EEEETTSEEEEEETTTCCE-EEEEE--CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred             CCCCEE-EEECCCCeEEEEECCCCce-EEecc--CCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence            999999 6778899999999998872 22221  35567899999999998776532            67888887654

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.91  E-value=8.2e-22  Score=213.14  Aligned_cols=337  Identities=7%  Similarity=-0.055  Sum_probs=231.0

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      .....+.+|. .+...+|+|++ ..|+.+ .++.|.+|++......         .+....    .............+.
T Consensus       236 ~~~~~l~~~~-~~~~~~~SpDG-~~la~~-~~~~i~~~d~~~~~l~---------~l~~~~----~~~~~~~~~~~~~v~  299 (1045)
T 1k32_A          236 KDLRKHTSFT-DYYPRHLNTDG-RRILFS-KGGSIYIFNPDTEKIE---------KIEIGD----LESPEDRIISIPSKF  299 (1045)
T ss_dssp             CSCEECCCCC-SSCEEEEEESS-SCEEEE-ETTEEEEECTTTCCEE---------ECCCCC----CCBCCSEEEECGGGG
T ss_pred             CcceEecCCC-CcceeeEcCCC-CEEEEE-eCCEEEEecCCceEee---------eeccCc----ccccccccccccccc
Confidence            3445566665 46788999999 666666 4899999998432210         000000    000000011223578


Q ss_pred             eeEec-cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccC-CeeEEEECCCCCCEEEEEeCCCcEE-
Q psy17682        115 EITIS-EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKG-PVLDIAWSPHDDNVIASGSEDCVVK-  191 (490)
Q Consensus       115 ~~~~s-~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~-~V~~~~~~p~~~~~l~s~~~dg~i~-  191 (490)
                      .++|| |++  +.....   . ++.+.+|+..     .+.    ...+..|.+ .+.+++|+ +| ..|+.++.++.+. 
T Consensus       300 ~~~~S~pdG--~~la~~---~-~~~i~~~~~~-----~~~----~~~~~~~~~~~~~~~~~s-dg-~~l~~~s~~~~l~~  362 (1045)
T 1k32_A          300 AEDFSPLDG--DLIAFV---S-RGQAFIQDVS-----GTY----VLKVPEPLRIRYVRRGGD-TK-VAFIHGTREGDFLG  362 (1045)
T ss_dssp             EEEEEECGG--GCEEEE---E-TTEEEEECTT-----SSB----EEECSCCSCEEEEEECSS-SE-EEEEEEETTEEEEE
T ss_pred             eeeecCCCC--CEEEEE---E-cCEEEEEcCC-----CCc----eEEccCCCcceEEeeeEc-CC-CeEEEEECCCceEE
Confidence            99999 995  222222   2 7889999875     121    223456777 89999999 88 7888888888888 


Q ss_pred             EEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCC
Q psy17682        192 VWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS  271 (490)
Q Consensus       192 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~  271 (490)
                      +|++.+++...        +.+|...+..++|+|+|+ .|++++.++.|++||+.+++....+..|...+.+++|+|||+
T Consensus       363 ~~d~~~~~~~~--------l~~~~~~~~~~~~SpDG~-~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~  433 (1045)
T 1k32_A          363 IYDYRTGKAEK--------FEENLGNVFAMGVDRNGK-FAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSR  433 (1045)
T ss_dssp             EEETTTCCEEE--------CCCCCCSEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSC
T ss_pred             EEECCCCCceE--------ecCCccceeeeEECCCCC-EEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCC
Confidence            89987664322        224778899999999996 899999999999999999988877778888999999999999


Q ss_pred             EEEEEeCCC----------eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC----
Q psy17682        272 KLLTTCKDK----------KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD----  337 (490)
Q Consensus       272 ~l~~~~~dg----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~----  337 (490)
                      +|++++.++          .|++||+.+++ ...+..+... +..++|+|+|+.|+.++.   ++...+|+.....    
T Consensus       434 ~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~-~~~~~~spdG~~l~~~s~---~~~~~~~~~~~~~~~~~  508 (1045)
T 1k32_A          434 FIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSH-DYAPAFDADSKNLYYLSY---RSLDPSPDRVVLNFSFE  508 (1045)
T ss_dssp             EEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSB-EEEEEECTTSCEEEEEES---CCCCCEECSSSSCEECC
T ss_pred             eEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcc-cCCceEcCCCCEEEEEec---ccCCcCcchhccccccc
Confidence            999887654          89999999877 5555555543 788999999999988874   2233333322110    


Q ss_pred             ---------------CC----------------------eEEEeccCCCceeeeeecCCCCeEEE------------Eec
Q psy17682        338 ---------------EP----------------------IVMVELDTSNGVMFPLYDPDTNLVYL------------CGK  368 (490)
Q Consensus       338 ---------------~~----------------------~~~~~~~~~~~i~~~~~s~~~~~l~~------------~g~  368 (490)
                                     .+                      .......+...+..++++|||+.+++            ...
T Consensus       509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~  588 (1045)
T 1k32_A          509 VVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAP  588 (1045)
T ss_dssp             SCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCC
T ss_pred             cCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccC
Confidence                           00                      00111123356788999999987743            112


Q ss_pred             CCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-cceeEEEEecCCC
Q psy17682        369 GDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-CEIGRFFRLNNSG  425 (490)
Q Consensus       369 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~~~~~~~~~  425 (490)
                      ....|++||+.+++.  ..+.     ..+.+++|||||+.++++ .+.+++|++.++.
T Consensus       589 ~~~~l~~~d~~~~~~--~~l~-----~~v~~~~~S~DG~~l~~~~~~~i~~~d~~~~~  639 (1045)
T 1k32_A          589 EKGVLLKYDVKTRKV--TEVK-----NNLTDLRLSADRKTVMVRKDDGKIYTFPLEKP  639 (1045)
T ss_dssp             CCEEEEEEETTTCCE--EEEE-----EEEEEEEECTTSCEEEEEETTSCEEEEESSCT
T ss_pred             CCceEEEEECCCCcE--EEee-----cCcceEEECCCCCEEEEEcCCcEEEEeCccCc
Confidence            355788888888761  2222     468899999999877766 4578999997765

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.91  E-value=7.4e-22  Score=181.79  Aligned_cols=254  Identities=14%  Similarity=0.075  Sum_probs=179.6

Q ss_pred             eeeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCC-CCCCCCCCccccceeccccceeeccc
Q psy17682         24 RLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKD-GYIPPSEKSKSALKVTKRSNVLDKVG  102 (490)
Q Consensus        24 ~~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (490)
                      .+..|+..+  .....+.+|...|.+++|+|++ .+|++++ ++.|.+||+.+ +....                     
T Consensus        23 ~i~~~d~~~--~~~~~~~~~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~~~~~~---------------------   77 (297)
T 2ojh_A           23 SIEIFNIRT--RKMRVVWQTPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGDPSPEK---------------------   77 (297)
T ss_dssp             EEEEEETTT--TEEEEEEEESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSCCSCEE---------------------
T ss_pred             eEEEEeCCC--CceeeeccCCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCCCCceE---------------------
Confidence            355566543  4455678899999999999999 7777776 78999999877 44100                     


Q ss_pred             CCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeec-ccCCeeEEEECCCCCCEE
Q psy17682        103 GKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGG-HKGPVLDIAWSPHDDNVI  181 (490)
Q Consensus       103 ~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~~~~~p~~~~~l  181 (490)
                                                                               ...+ +...|.+++|+|++ .+|
T Consensus        78 ---------------------------------------------------------~~~~~~~~~~~~~~~spdg-~~l   99 (297)
T 2ojh_A           78 ---------------------------------------------------------VDTGFATICNNDHGISPDG-ALY   99 (297)
T ss_dssp             ---------------------------------------------------------CCCTTCCCBCSCCEECTTS-SEE
T ss_pred             ---------------------------------------------------------eccccccccccceEECCCC-CEE
Confidence                                                                     0112 23578889999998 788


Q ss_pred             EEEe--CCCcEEEEEC--CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC-CeeEEEEec
Q psy17682        182 ASGS--EDCVVKVWQI--PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT-GEIMIQIEC  256 (490)
Q Consensus       182 ~s~~--~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~  256 (490)
                      ++++  .++..+||.+  .++.. ..       +. +...+..++|+|+++.++++++.++.+++|+++. +.....+..
T Consensus       100 ~~~~~~~~~~~~l~~~~~~~~~~-~~-------~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~  170 (297)
T 2ojh_A          100 AISDKVEFGKSAIYLLPSTGGTP-RL-------MT-KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTH  170 (297)
T ss_dssp             EEEECTTTSSCEEEEEETTCCCC-EE-------CC-SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCC
T ss_pred             EEEEeCCCCcceEEEEECCCCce-EE-------ee-cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEccc
Confidence            8888  3345555554  44432 22       22 3335899999999974455888899999998632 233455666


Q ss_pred             CCCcEEEEEEcCCCCEEEEEe-CCCeEEEEeCC-CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCC--------cee
Q psy17682        257 HPDIVYSASWNWDGSKLLTTC-KDKKMRIINPR-TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKM--------SER  326 (490)
Q Consensus       257 ~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~--------~~~  326 (490)
                      +...+.+++|+|+++.|++++ .++.+++|++. .+.....+..+.. .+..+.|+|+|++|++++.++        ...
T Consensus       171 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~  249 (297)
T 2ojh_A          171 GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAY-GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDV  249 (297)
T ss_dssp             SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSE-EEEEEEECTTSSEEEEEEEETTCCSCCSSEEE
T ss_pred             CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCc-ccCCeEECCCCCEEEEEEcCCCCCcccccCce
Confidence            788899999999999888766 58899999886 4455555655544 488899999999988876322        237


Q ss_pred             EEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC
Q psy17682        327 QYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD  370 (490)
Q Consensus       327 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d  370 (490)
                      .|.+||+.+.+.........+...+..++|+|++++|++++..+
T Consensus       250 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          250 RVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             EEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred             EEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence            79999998765433333335566789999999999996655444

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.90  E-value=3.6e-22  Score=194.11  Aligned_cols=215  Identities=13%  Similarity=0.128  Sum_probs=156.2

Q ss_pred             cccCCeeEEEECCCCCCEEE----EEeCCCcEEEEECCCC-----CcccccccceeeecccccCEEEEEEeeCCCCEEEE
Q psy17682        163 GHKGPVLDIAWSPHDDNVIA----SGSEDCVVKVWQIPDG-----GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLT  233 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~----s~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s  233 (490)
                      .|.+.|.+++|+|++ ++|+    +|+.|++|++||+.++     +..+.+ .....+.+|...|.+++|+|++.++|++
T Consensus        90 ~~~~~v~~l~~spdg-~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~h~~~V~~v~~~p~~~~~las  167 (434)
T 2oit_A           90 PMKFPIHHLALSCDN-LTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPF-AYHKLLKDAGGMVIDMKWNPTVPSMVAV  167 (434)
T ss_dssp             CCSSCEEEEEECTTS-CEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCS-EEEECCCSGGGSEEEEEECSSCTTEEEE
T ss_pred             cCCCcccEEEEcCCC-CEEEEEEeccCCCceEEEEEccccccCCcCCccee-eeeeccCCCCCceEEEEECCCCCCEEEE
Confidence            467889999999998 7888    7889999999998654     110000 1123356799999999999985469999


Q ss_pred             EeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCC------CceeEE
Q psy17682        234 AGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEG------SKATRA  307 (490)
Q Consensus       234 ~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~~~~  307 (490)
                      ++.||+|++||+++++.+....+|...|.+++|+|+|++|++|+.||+|++||++ ++....+..+..      ..+.++
T Consensus       168 ~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v  246 (434)
T 2oit_A          168 CLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDV  246 (434)
T ss_dssp             EETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEE
T ss_pred             EECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEE
Confidence            9999999999999987776677788999999999999999999999999999998 555555544322      158899


Q ss_pred             EEeCCCcEEEEEeC-CC---ceeEEEEecCCCCCC--CeEEEec-c-------CCCceeeeeecCCCCeEEEEecCCCeE
Q psy17682        308 IYLKSGLIFTTGFS-KM---SERQYSLRAPDHLDE--PIVMVEL-D-------TSNGVMFPLYDPDTNLVYLCGKGDSVI  373 (490)
Q Consensus       308 ~~s~~~~~l~~~~~-~~---~~~~i~iwd~~~~~~--~~~~~~~-~-------~~~~i~~~~~s~~~~~l~~~g~~dg~i  373 (490)
                      .|++++.++++... ++   ....+++|++++...  +...... .       .......+.+-++.++++++.+..+.|
T Consensus       247 ~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv  326 (434)
T 2oit_A          247 LWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEV  326 (434)
T ss_dssp             EEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBC
T ss_pred             EEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCce
Confidence            99999888765431 11   123599999986532  2222221 1       111122333347788887887777777


Q ss_pred             EEEEecC
Q psy17682        374 RYFEITA  380 (490)
Q Consensus       374 ~iwd~~~  380 (490)
                      .+.....
T Consensus       327 ~vl~~~~  333 (434)
T 2oit_A          327 SILARQS  333 (434)
T ss_dssp             EEEEECT
T ss_pred             eEEEecC
Confidence            7777544

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.90  E-value=5.8e-22  Score=186.40  Aligned_cols=278  Identities=10%  Similarity=0.057  Sum_probs=196.3

Q ss_pred             EEEeeCCCceEEEECCCCCCCCcccCCCCcceee-cccC-CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccccc
Q psy17682        129 EIRKLKSQQALSILPPPSTAPNTGRINADHALVG-GHKG-PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTE  206 (490)
Q Consensus       129 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~-~h~~-~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  206 (490)
                      .++++..++.|.+|+..     .++   ....+. ++.. .+.+++|+|++..++++++.++.|.+||+.+++.+..+..
T Consensus         3 ~~v~~~~~~~v~~~d~~-----~~~---~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~   74 (337)
T 1pby_B            3 YILAPARPDKLVVIDTE-----KMA---VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDL   74 (337)
T ss_dssp             EEEEEETTTEEEEEETT-----TTE---EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEEC
T ss_pred             EEEEcCCCCeEEEEECC-----CCc---EEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEc
Confidence            56677889999999985     222   222332 2222 5889999999855566777789999999998877654432


Q ss_pred             ceeeecccccCEEEEEEeeCCCCEEEEEe------------CCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEE
Q psy17682        207 PVVDLLYHQRRVGLVLWHPTAQNVLLTAG------------SDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLL  274 (490)
Q Consensus       207 ~~~~~~~~~~~v~~~~~~p~~~~~l~s~~------------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  274 (490)
                      +.  ...|...+.+++|+|+++ .++++.            .++.|.+||+.+++.+..+.. ...+.+++|+|++++|+
T Consensus        75 ~~--~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~  150 (337)
T 1pby_B           75 ST--PEERVKSLFGAALSPDGK-TLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLY  150 (337)
T ss_dssp             CB--TTEEEECTTCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEE
T ss_pred             CC--cccccccccceEECCCCC-EEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEE
Confidence            10  000223567899999996 677665            579999999999988877764 55678899999999888


Q ss_pred             EEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCce---------------------eEEEEecC
Q psy17682        275 TTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSE---------------------RQYSLRAP  333 (490)
Q Consensus       275 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~---------------------~~i~iwd~  333 (490)
                      ++  ++.|++||+.+++....+..+...  ..+.|+|+|..++........                     ..|.+||+
T Consensus       151 ~~--~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~  226 (337)
T 1pby_B          151 GL--GRDLHVMDPEAGTLVEDKPIQSWE--AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL  226 (337)
T ss_dssp             EE--SSSEEEEETTTTEEEEEECSTTTT--TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEET
T ss_pred             Ee--CCeEEEEECCCCcEeeeeeccccC--CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeC
Confidence            87  689999999999887766643311  122688998866554322111                     15789999


Q ss_pred             CCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-
Q psy17682        334 DHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-  412 (490)
Q Consensus       334 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-  412 (490)
                      .+.+.. ......+...+..++|+|+|++++++   ++.|++||+.+++    .+..+..+..+.+++|+|++.+++++ 
T Consensus       227 ~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~----~~~~~~~~~~~~~~~~s~dg~~l~~~~  298 (337)
T 1pby_B          227 ETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKNA----SIKRVPLPHSYYSVNVSTDGSTVWLGG  298 (337)
T ss_dssp             TTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEEETTTTE----EEEEEECSSCCCEEEECTTSCEEEEES
T ss_pred             CCCCce-EeecCCCCCceeeEEECCCCCEEEEe---CCeEEEEECCCCc----CcceecCCCceeeEEECCCCCEEEEEc
Confidence            886543 22222344567889999999998544   7999999998876    33334445578999999999876655 


Q ss_pred             -cceeEEEEecCCCceEEE
Q psy17682        413 -CEIGRFFRLNNSGLCQVV  430 (490)
Q Consensus       413 -~~~~~~~~~~~~~~~~~i  430 (490)
                       ++.+.+|++.+++.+..+
T Consensus       299 ~~~~i~v~d~~~~~~~~~~  317 (337)
T 1pby_B          299 ALGDLAAYDAETLEKKGQV  317 (337)
T ss_dssp             BSSEEEEEETTTCCEEEEE
T ss_pred             CCCcEEEEECcCCcEEEEE
Confidence             347889999888744433

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.90  E-value=4.4e-22  Score=183.30  Aligned_cols=255  Identities=13%  Similarity=0.090  Sum_probs=177.7

Q ss_pred             eCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCC-CCcccccccceeee
Q psy17682        133 LKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPD-GGISRTLTEPVVDL  211 (490)
Q Consensus       133 ~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~  211 (490)
                      .+.++.|.+|++.     .+    ....+..|...|.+++|+|++ .+|++++ ++.|++||+.+ ++.....       
T Consensus        18 ~~~~~~i~~~d~~-----~~----~~~~~~~~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~~~~~~~~-------   79 (297)
T 2ojh_A           18 GSMRSSIEIFNIR-----TR----KMRVVWQTPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGDPSPEKVD-------   79 (297)
T ss_dssp             CCCCEEEEEEETT-----TT----EEEEEEEESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSCCSCEECC-------
T ss_pred             CCcceeEEEEeCC-----CC----ceeeeccCCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCCCCceEec-------
Confidence            4678899999985     22    233456789999999999998 7888876 78999999988 6654332       


Q ss_pred             ccc-ccCEEEEEEeeCCCCEEEEEeC--CCcEEE--EECCCCeeEEEEecCCCcEEEEEEcCCCCEEE-EEeCCCeEEEE
Q psy17682        212 LYH-QRRVGLVLWHPTAQNVLLTAGS--DNNVAI--WNVGTGEIMIQIECHPDIVYSASWNWDGSKLL-TTCKDKKMRII  285 (490)
Q Consensus       212 ~~~-~~~v~~~~~~p~~~~~l~s~~~--dg~v~i--wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iw  285 (490)
                      ..+ ...+.+++|+|+++ .|++++.  ++...|  +++.+++ ...+..+ ..+..++|+|+++.|+ +++.++.+++|
T Consensus        80 ~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~  156 (297)
T 2ojh_A           80 TGFATICNNDHGISPDGA-LYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIY  156 (297)
T ss_dssp             CTTCCCBCSCCEECTTSS-EEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred             cccccccccceEECCCCC-EEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEE
Confidence            123 46788999999996 7888873  344455  4555554 3445433 4589999999999877 77789999999


Q ss_pred             eCC--CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeE
Q psy17682        286 NPR--TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLV  363 (490)
Q Consensus       286 d~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  363 (490)
                      +++  +++ ...+..+.. .+..+.|+|+|+.++.++.  .++.+++|+++...... .....+...+..++|+|+|++|
T Consensus       157 ~~~~~~~~-~~~~~~~~~-~~~~~~~s~dg~~l~~~~~--~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~l  231 (297)
T 2ojh_A          157 SMDIDSGV-ETRLTHGEG-RNDGPDYSPDGRWIYFNSS--RTGQMQIWRVRVDGSSV-ERITDSAYGDWFPHPSPSGDKV  231 (297)
T ss_dssp             EEETTTCC-EEECCCSSS-CEEEEEECTTSSEEEEEEC--TTSSCEEEEEETTSSCE-EECCCCSEEEEEEEECTTSSEE
T ss_pred             EEECCCCc-ceEcccCCC-ccccceECCCCCEEEEEec--CCCCccEEEECCCCCCc-EEEecCCcccCCeEECCCCCEE
Confidence            854  333 334444444 4899999999998876653  25667777765322222 2222344568889999999998


Q ss_pred             EEEecC----------CCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc
Q psy17682        364 YLCGKG----------DSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       364 ~~~g~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  414 (490)
                      ++++..          ++.|++||+.+++. ........+...+..++|+|++..++.++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~spdg~~l~~~~~  291 (297)
T 2ojh_A          232 VFVSYDADVFDHPRDLDVRVQLMDMDGGNV-ETLFDLFGGQGTMNSPNWSPDGDEFAYVRY  291 (297)
T ss_dssp             EEEEEETTCCSCCSSEEEEEEEEETTSCSC-EEEEEEEESTTTSCSCCBCTTSSEEEEEEE
T ss_pred             EEEEcCCCCCcccccCceEEEEEecCCCCc-eeeeccCCCCcccccceECCCCCEEEEEEe
Confidence            554432          26799999988763 222222245568999999999998776643

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.90  E-value=5e-21  Score=181.13  Aligned_cols=281  Identities=12%  Similarity=0.145  Sum_probs=184.0

Q ss_pred             CCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeC--CCcEEEEECCCCCcccccccceeeec
Q psy17682        135 SQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSE--DCVVKVWQIPDGGISRTLTEPVVDLL  212 (490)
Q Consensus       135 ~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~  212 (490)
                      .++.+.+|.++.   ..+++.  ......+...+..++|+|+| ++++++..  ++.|.+|++.+++.. .    ...+.
T Consensus        14 ~~~~i~v~~~d~---~tg~~~--~~~~~~~~~~p~~~a~spdg-~l~~~~~~~~~~~v~~~~~~~g~~~-~----~~~~~   82 (347)
T 3hfq_A           14 TSQGIYQGTLDT---TAKTLT--NDGLLAATQNPTYLALSAKD-CLYSVDKEDDEGGIAAWQIDGQTAH-K----LNTVV   82 (347)
T ss_dssp             SCCEEEEEEEET---TTTEEE--EEEEEEECSCCCCEEECTTC-EEEEEEEETTEEEEEEEEEETTEEE-E----EEEEE
T ss_pred             CCCCEEEEEEcC---CCCeEE--EeeeeeccCCcceEEEccCC-eEEEEEecCCCceEEEEEecCCcEE-E----eeeee
Confidence            456677877751   122211  11223556778899999998 54444432  689999999665431 1    11233


Q ss_pred             ccccCEEEEEEeeCCCCEEEEEe-CCCcEEEEECCC-C--eeEEEEecC---------CCcEEEEEEcCCCCEEEEEeCC
Q psy17682        213 YHQRRVGLVLWHPTAQNVLLTAG-SDNNVAIWNVGT-G--EIMIQIECH---------PDIVYSASWNWDGSKLLTTCKD  279 (490)
Q Consensus       213 ~~~~~v~~~~~~p~~~~~l~s~~-~dg~v~iwd~~~-~--~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~d  279 (490)
                      .+...+..++|+|+++ +|++++ .++.|.+|++.. +  +.+..+...         ...+.+++|+|+|+++++...+
T Consensus        83 ~~~~~p~~~a~spdg~-~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~  161 (347)
T 3hfq_A           83 APGTPPAYVAVDEARQ-LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS  161 (347)
T ss_dssp             EESCCCSEEEEETTTT-EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT
T ss_pred             cCCCCCEEEEECCCCC-EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC
Confidence            4667788999999996 666666 689999999963 3  233333311         2248899999999966666678


Q ss_pred             CeEEEEeCC-CCceee--eeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe-EEEec---cC----C
Q psy17682        280 KKMRIINPR-TGAIEE--EAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI-VMVEL---DT----S  348 (490)
Q Consensus       280 g~i~iwd~~-~~~~~~--~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~-~~~~~---~~----~  348 (490)
                      +.|++||+. +++...  .+..+.+..+..++|+|+|+++++...  .++.+.+|++....... .....   ..    .
T Consensus       162 ~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~--~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~  239 (347)
T 3hfq_A          162 DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE--LSSQIASLKYDTQTGAFTQLGIVKTIPADYTAH  239 (347)
T ss_dssp             TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEET--TTTEEEEEEEETTTTEEEEEEEEESSCTTCCSC
T ss_pred             CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeC--CCCEEEEEEecCCCCceEEeeeeeecCCCCCCC
Confidence            899999998 454332  223333434788999999996666542  46789999987522111 11111   11    1


Q ss_pred             CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeC-CCceeeEEEeeCceeEEeec---ceeEEEEec--
Q psy17682        349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQT-PDPQRGIGMMPKRGCDVNSC---EIGRFFRLN--  422 (490)
Q Consensus       349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~---~~~~~~~~~--  422 (490)
                      ..+..++|+|||++|+++...++.|.+|++..... ...+..... ...+.+++|+|||+++++++   +.+.+|+++  
T Consensus       240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~-~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~  318 (347)
T 3hfq_A          240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH-LTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLT  318 (347)
T ss_dssp             CEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC-EEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             CcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc-EEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCC
Confidence            34788999999999988888899999999974321 223333333 45688999999998766653   478899665  


Q ss_pred             CCCceEEEE
Q psy17682        423 NSGLCQVVS  431 (490)
Q Consensus       423 ~~~~~~~i~  431 (490)
                      ++. +..+.
T Consensus       319 tg~-l~~~~  326 (347)
T 3hfq_A          319 SGK-LSLLQ  326 (347)
T ss_dssp             TCC-EEEEE
T ss_pred             CCe-EEecc
Confidence            455 55443

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.89  E-value=4.7e-21  Score=200.27  Aligned_cols=282  Identities=11%  Similarity=0.100  Sum_probs=196.9

Q ss_pred             ccCCeeEeccccccceEEEEEeeCC-Cc-----eEEEECCCCCCCCcccCCCCcceeeccc-------------------
Q psy17682        111 STANEITISEDYVKEFKEEIRKLKS-QQ-----ALSILPPPSTAPNTGRINADHALVGGHK-------------------  165 (490)
Q Consensus       111 ~~v~~~~~s~~~~~~~~~~~~~~~~-~g-----~i~v~~~~~~~~~~~~~~~~~~~~~~h~-------------------  165 (490)
                      ..+..++|||++  +   .++.+.. ++     .|.+|++.     .++   ....+..|.                   
T Consensus        37 ~~~~~~~~SpdG--~---~la~~~~~d~~~~~~~i~~~d~~-----~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (741)
T 2ecf_A           37 PTLMKPKVAPDG--S---RVTFLRGKDSDRNQLDLWSYDIG-----SGQ---TRLLVDSKVVLPGTETLSDEEKARRERQ  103 (741)
T ss_dssp             CCCEEEEECTTS--S---EEEEEECCSSCTTEEEEEEEETT-----TCC---EEEEECGGGTC-----------------
T ss_pred             CCCCCceEecCC--C---EEEEEeccCCCCcccEEEEEECC-----CCc---eeEccchhhcccccccccchhhhhhhhh
Confidence            357899999996  2   3344444 66     89999985     222   122333332                   


Q ss_pred             -----CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC--cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC
Q psy17682        166 -----GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG--ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN  238 (490)
Q Consensus       166 -----~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg  238 (490)
                           ..|.+++|+||| ++|++++. +.|++||+.++.  ....       +..|...+.+++|+|+|+ .|+.++ ++
T Consensus       104 ~~~~~~~v~~~~~SpDg-~~l~~~~~-~~i~~~d~~~~~~~~~~~-------l~~~~~~~~~~~~SPDG~-~la~~~-~~  172 (741)
T 2ecf_A          104 RIAAMTGIVDYQWSPDA-QRLLFPLG-GELYLYDLKQEGKAAVRQ-------LTHGEGFATDAKLSPKGG-FVSFIR-GR  172 (741)
T ss_dssp             ---CCEESCCCEECTTS-SEEEEEET-TEEEEEESSSCSTTSCCB-------CCCSSSCEEEEEECTTSS-EEEEEE-TT
T ss_pred             hhccccCcceeEECCCC-CEEEEEeC-CcEEEEECCCCCcceEEE-------cccCCcccccccCCCCCC-EEEEEe-CC
Confidence                 238899999999 78888876 899999998872  2222       334778899999999996 777776 46


Q ss_pred             cEEEEECCCCeeEEEEecCCCc----------------EEEEEEcCCCCEEEEEeCCC----------------------
Q psy17682        239 NVAIWNVGTGEIMIQIECHPDI----------------VYSASWNWDGSKLLTTCKDK----------------------  280 (490)
Q Consensus       239 ~v~iwd~~~~~~~~~~~~~~~~----------------v~~~~~~~~~~~l~~~~~dg----------------------  280 (490)
                      .|++||+.+++.......+...                +..++|+|||++|++++.|+                      
T Consensus       173 ~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~  252 (741)
T 2ecf_A          173 NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQR  252 (741)
T ss_dssp             EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEE
T ss_pred             cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEee
Confidence            8999999988766544433332                47799999999999988765                      


Q ss_pred             -----------eEEEEeCCC-Cceeeeeee--cCCCceeEEEEeCCCcEEEEEeC--CCceeEEEEecCCCCCCCeEEEe
Q psy17682        281 -----------KMRIINPRT-GAIEEEAVC--HEGSKATRAIYLKSGLIFTTGFS--KMSERQYSLRAPDHLDEPIVMVE  344 (490)
Q Consensus       281 -----------~i~iwd~~~-~~~~~~~~~--~~~~~~~~~~~s~~~~~l~~~~~--~~~~~~i~iwd~~~~~~~~~~~~  344 (490)
                                 .|++||+.+ ++.......  +.. .+..++| |||+.|+++..  ...+..|.+||+.++........
T Consensus       253 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~  330 (741)
T 2ecf_A          253 YPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDI-YLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHE  330 (741)
T ss_dssp             CCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSE-EEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEE
T ss_pred             cCCCCCCCCeeEEEEEECCCCCceEEecCCCCcce-EEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEc
Confidence                       899999998 775543322  333 4889999 99998887652  22478899999998764333322


Q ss_pred             ccCCC---ceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeE-EEeeCceeEEe-ec-c---e
Q psy17682        345 LDTSN---GVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGI-GMMPKRGCDVN-SC-E---I  415 (490)
Q Consensus       345 ~~~~~---~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~-~~sp~~~~l~~-~~-~---~  415 (490)
                       ....   .+..++|+|||+++ ++++.||.++||.+..... ...+.  .+...+..+ +|+|++..++. +. +   .
T Consensus       331 -~~~~~~~~~~~~~~spdg~~~-~~~~~~g~~~l~~~~~~~~-~~~l~--~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~  405 (741)
T 2ecf_A          331 -TSPTWVPLHNSLRFLDDGSIL-WSSERTGFQHLYRIDSKGK-AAALT--HGNWSVDELLAVDEKAGLAYFRAGIESARE  405 (741)
T ss_dssp             -ECSSCCCCCSCCEECTTSCEE-EEECTTSSCEEEEECSSSC-EEESC--CSSSCEEEEEEEETTTTEEEEEECSSCTTC
T ss_pred             -CCCCcCCcCCceEECCCCeEE-EEecCCCccEEEEEcCCCC-eeeee--ecceEEEeEeEEeCCCCEEEEEEeCCCCce
Confidence             2212   35689999999965 7788899888888874322 33332  234567777 69999976543 32 2   6


Q ss_pred             eEEEEecC
Q psy17682        416 GRFFRLNN  423 (490)
Q Consensus       416 ~~~~~~~~  423 (490)
                      .++|.+..
T Consensus       406 ~~l~~~~~  413 (741)
T 2ecf_A          406 SQIYAVPL  413 (741)
T ss_dssp             BEEEEEET
T ss_pred             EEEEEEEc
Confidence            78999864

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.89  E-value=1.3e-21  Score=203.81  Aligned_cols=288  Identities=13%  Similarity=0.079  Sum_probs=196.9

Q ss_pred             cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccC---CeeEEEECCCCCCEEEEEeCC-
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKG---PVLDIAWSPHDDNVIASGSED-  187 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~---~V~~~~~~p~~~~~l~s~~~d-  187 (490)
                      ....++|+|++.     .++ .+.+|.+.+|+..     .++   ....+.+|..   .|.+++|+||| ++|++++.+ 
T Consensus        18 ~~~~~~~spdg~-----~~~-~~~dg~i~~~d~~-----~g~---~~~~~~~~~~~~~~v~~~~~SpDg-~~l~~~~~~~   82 (723)
T 1xfd_A           18 HDPEAKWISDTE-----FIY-REQKGTVRLWNVE-----TNT---STVLIEGKKIESLRAIRYEISPDR-EYALFSYNVE   82 (723)
T ss_dssp             CCCCCCBSSSSC-----BCC-CCSSSCEEEBCGG-----GCC---CEEEECTTTTTTTTCSEEEECTTS-SEEEEEESCC
T ss_pred             cccccEEcCCCc-----EEE-EeCCCCEEEEECC-----CCc---EEEEeccccccccccceEEECCCC-CEEEEEecCc
Confidence            367889999962     222 3678899999985     222   3345556654   49999999998 788888764 


Q ss_pred             --------CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCC
Q psy17682        188 --------CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPD  259 (490)
Q Consensus       188 --------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~  259 (490)
                              +.|.+||+.+++. ..+..    ..+|...+..++|+|+|+ .|+.++. +.|++||+.+++.......+..
T Consensus        83 ~~~~~~~~~~i~~~d~~~~~~-~~l~~----~~~~~~~~~~~~~SPdG~-~la~~~~-~~i~~~~~~~g~~~~~~~~~~~  155 (723)
T 1xfd_A           83 PIYQHSYTGYYVLSKIPHGDP-QSLDP----PEVSNAKLQYAGWGPKGQ-QLIFIFE-NNIYYCAHVGKQAIRVVSTGKE  155 (723)
T ss_dssp             CCSSSCCCSEEEEEESSSCCC-EECCC----TTCCSCCCSBCCBCSSTT-CEEEEET-TEEEEESSSSSCCEEEECCCBT
T ss_pred             cceeecceeeEEEEECCCCce-EeccC----CccccccccccEECCCCC-EEEEEEC-CeEEEEECCCCceEEEecCCCC
Confidence                    7888999988875 22221    233555688999999996 6777765 7999999998887665554333


Q ss_pred             cE------------------EEEEEcCCCCEEEEEeCCC----------------------------------eEEEEeC
Q psy17682        260 IV------------------YSASWNWDGSKLLTTCKDK----------------------------------KMRIINP  287 (490)
Q Consensus       260 ~v------------------~~~~~~~~~~~l~~~~~dg----------------------------------~i~iwd~  287 (490)
                      .+                  .+++|+|||+.|++++.++                                  .|++||+
T Consensus       156 ~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~  235 (723)
T 1xfd_A          156 GVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGL  235 (723)
T ss_dssp             TTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEES
T ss_pred             CceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEEC
Confidence            33                  7899999999999987553                                  7999999


Q ss_pred             CCCceeeeeeecC-----CCceeEEEEeCCCcEEEEEeCC-CceeEEEEecCCCCCCCeEEEeccCCCce----eeeeec
Q psy17682        288 RTGAIEEEAVCHE-----GSKATRAIYLKSGLIFTTGFSK-MSERQYSLRAPDHLDEPIVMVELDTSNGV----MFPLYD  357 (490)
Q Consensus       288 ~~~~~~~~~~~~~-----~~~~~~~~~s~~~~~l~~~~~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~i----~~~~~s  357 (490)
                      .+++....+..+.     ...+..++|+|||+++++.... ..+..|++||+.+++....... .+...+    ..++|+
T Consensus       236 ~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~~s  314 (723)
T 1xfd_A          236 NGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHED-ESEAWLHRQNEEPVFS  314 (723)
T ss_dssp             SSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEE-ECSSCCCCCCCCCEEC
T ss_pred             CCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEe-ccCCEEeccCCCceEc
Confidence            9887655555431     2347889999999988766432 2467899999988664332222 222223    378999


Q ss_pred             CCCCeEEEE-ecCCC------eEEEEEecCCCCe--eEEeeeeeCCCceee-EEEeeCceeEEee-c----ceeEEEEec
Q psy17682        358 PDTNLVYLC-GKGDS------VIRYFEITAEPPF--VHYINTFQTPDPQRG-IGMMPKRGCDVNS-C----EIGRFFRLN  422 (490)
Q Consensus       358 ~~~~~l~~~-g~~dg------~i~iwd~~~~~~~--~~~~~~~~~~~~i~~-~~~sp~~~~l~~~-~----~~~~~~~~~  422 (490)
                      |||+.|++. +..++      .|++||+..+...  ...+.  .+...+.. ++|+|||+.++.. .    ...++|.+.
T Consensus       315 pdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~--~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~  392 (723)
T 1xfd_A          315 KDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT--SGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN  392 (723)
T ss_dssp             TTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSC--CSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred             CCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEee--cCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence            999988665 55677      4666663233210  11221  12234444 6999999877643 2    457899986


Q ss_pred             CC
Q psy17682        423 NS  424 (490)
Q Consensus       423 ~~  424 (490)
                      ..
T Consensus       393 ~~  394 (723)
T 1xfd_A          393 TV  394 (723)
T ss_dssp             SS
T ss_pred             CC
Confidence            53

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.89  E-value=1.6e-21  Score=197.96  Aligned_cols=230  Identities=13%  Similarity=0.064  Sum_probs=160.6

Q ss_pred             CCeeEEEECCCCCCEEEEEeC---CCcEEEEECCC--CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcE
Q psy17682        166 GPVLDIAWSPHDDNVIASGSE---DCVVKVWQIPD--GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNV  240 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~---dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v  240 (490)
                      ..|.+++|+|+  .++++++.   +...++|.+..  ......+.        ....+...+|+|+++.++++.+.++.+
T Consensus        65 ~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~--------~~~~~~~~~~s~dg~~~~~~s~~~~~~  134 (582)
T 3o4h_A           65 NSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTSRPGEEQRLE--------AVKPMRILSGVDTGEAVVFTGATEDRV  134 (582)
T ss_dssp             SEECEECTTCS--EEEEEEECSTTSCCEEEEEEETTSTTCCEECT--------TSCSBEEEEEEECSSCEEEEEECSSCE
T ss_pred             cccccccCCCC--eEEEEeccCCCCcceEEEEEeccCCCcccccc--------CCCCceeeeeCCCCCeEEEEecCCCCc
Confidence            57889999996  57777765   45567766543  22111211        122344678999987666666666667


Q ss_pred             EEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC----CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEE
Q psy17682        241 AIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD----KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIF  316 (490)
Q Consensus       241 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  316 (490)
                      .+||+.+++.......+.   .+++|+|||++|++++.+    +.|++||+.+++.. .+..+.+. +..++|+|||+.|
T Consensus       135 ~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~-~~~~~~SpDG~~l  209 (582)
T 3o4h_A          135 ALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGS-FSSASISPGMKVT  209 (582)
T ss_dssp             EEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCE-EEEEEECTTSCEE
T ss_pred             eEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCc-cccceECCCCCEE
Confidence            799999887665554333   789999999999988877    78999999988764 45555554 7999999999999


Q ss_pred             EEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeee--------ecCCCCeEEEEecCCCeEEEEEecCCCCeeEEe
Q psy17682        317 TTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPL--------YDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYI  388 (490)
Q Consensus       317 ~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~--------~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~  388 (490)
                      +++..+ ....|++||+.+++..   ....+...+..++        |+||| .++++++.|+.+++|++  ++    ..
T Consensus       210 ~~~~~~-~~~~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~--g~----~~  278 (582)
T 3o4h_A          210 AGLETA-REARLVTVDPRDGSVE---DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID--GE----RV  278 (582)
T ss_dssp             EEEECS-SCEEEEEECTTTCCEE---ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET--TE----EE
T ss_pred             EEccCC-CeeEEEEEcCCCCcEE---EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE--CC----ee
Confidence            966521 1238999999876532   2234445566777        99999 55588899999999999  53    22


Q ss_pred             eeeeCCCceeeEEEeeCceeEEeecc---eeEEEEecCC
Q psy17682        389 NTFQTPDPQRGIGMMPKRGCDVNSCE---IGRFFRLNNS  424 (490)
Q Consensus       389 ~~~~~~~~i~~~~~sp~~~~l~~~~~---~~~~~~~~~~  424 (490)
                      .  .....+.+++|+ ++.++++.+.   ..++|.++..
T Consensus       279 ~--~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~  314 (582)
T 3o4h_A          279 E--APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG  314 (582)
T ss_dssp             C--CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred             c--cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence            2  122578899999 9988776543   2456665543

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.89  E-value=8.8e-21  Score=197.06  Aligned_cols=290  Identities=13%  Similarity=0.073  Sum_probs=196.2

Q ss_pred             ceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccccc
Q psy17682         45 RRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVK  124 (490)
Q Consensus        45 ~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  124 (490)
                      ..|.+++|+|+ ..++++  .|+.|++||+.++..                  ......      ...+..++|||++  
T Consensus        82 ~~v~~~~~spd-~~~~~~--~~~~i~~~d~~~~~~------------------~~l~~~------~~~~~~~~~SpdG--  132 (706)
T 2z3z_A           82 FPSFRTLDAGR-GLVVLF--TQGGLVGFDMLARKV------------------TYLFDT------NEETASLDFSPVG--  132 (706)
T ss_dssp             CCCEEEEETTT-TEEEEE--ETTEEEEEETTTTEE------------------EEEECC------TTCCTTCEECTTS--
T ss_pred             cCceeEEECCC-CeEEEE--ECCEEEEEECCCCce------------------EEccCC------cccccCCcCCCCC--
Confidence            56999999999 466665  359999999987541                  000111      1246789999996  


Q ss_pred             ceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccC--------------CeeEEEECCCCCCEEEEEe-----
Q psy17682        125 EFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKG--------------PVLDIAWSPHDDNVIASGS-----  185 (490)
Q Consensus       125 ~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~--------------~V~~~~~~p~~~~~l~s~~-----  185 (490)
                      +.+.   . ..++.|.+|++.......++   ..+....+..              .+.+++|+||| ++|++++     
T Consensus       133 ~~la---~-~~~~~i~v~~~~~~~~~~g~---~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg-~~la~~~~d~~~  204 (706)
T 2z3z_A          133 DRVA---Y-VRNHNLYIARGGKLGEGMSR---AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG-SCLAFYRMDQSM  204 (706)
T ss_dssp             SEEE---E-EETTEEEEEECBCTTSCCCC---CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS-SEEEEEEEECTT
T ss_pred             CEEE---E-EECCeEEEEecCcccccCCC---cEEeccCCCCCeEcccchhhhhcCCCceEEECCCC-CEEEEEEECCCC
Confidence            2222   2 25689999998620000011   1111222222              25899999999 7888876     


Q ss_pred             ----------------------------CCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        186 ----------------------------EDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       186 ----------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                                                  .+..|.+||+.+++......     ...|...+.+++|+|+++ .|++++.+
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~spdg~-~l~~~~~~  278 (706)
T 2z3z_A          205 VKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQT-----GEPKEKFLTNLSWSPDEN-ILYVAEVN  278 (706)
T ss_dssp             SCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCC-----CSCTTCEEEEEEECTTSS-EEEEEEEC
T ss_pred             CceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeecc-----CCCCceeEeeEEEECCCC-EEEEEEeC
Confidence                                        45689999998776433211     123667899999999996 77777666


Q ss_pred             C-----cEEEEECCCCeeEEEEe--cCCC---cEEEEEEcC--CCCEEEEEeCCCeEEEEeCC-CCceeeeeeecCCCce
Q psy17682        238 N-----NVAIWNVGTGEIMIQIE--CHPD---IVYSASWNW--DGSKLLTTCKDKKMRIINPR-TGAIEEEAVCHEGSKA  304 (490)
Q Consensus       238 g-----~v~iwd~~~~~~~~~~~--~~~~---~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~  304 (490)
                      +     .|.+||+.+++....+.  .+..   .+..++|+|  +|+++++++.|+.++||++. ++..+..+..+... +
T Consensus       279 ~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~-v  357 (706)
T 2z3z_A          279 RAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWE-V  357 (706)
T ss_dssp             TTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSC-E
T ss_pred             CCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeE-E
Confidence            5     89999999984333332  2222   246789999  99999999999999999876 56666666655543 5


Q ss_pred             eE-EEEeCCCcEEEEEeCCCc--eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC---CeEEEEEe
Q psy17682        305 TR-AIYLKSGLIFTTGFSKMS--ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD---SVIRYFEI  378 (490)
Q Consensus       305 ~~-~~~s~~~~~l~~~~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d---g~i~iwd~  378 (490)
                      .. ++|+|+|+.|+.++.+..  ...|..||+.++.    ...+.+...+..++|+|||++++++++.+   +.|++||+
T Consensus       358 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~----~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~  433 (706)
T 2z3z_A          358 TNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK----TKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI  433 (706)
T ss_dssp             EEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC----CEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred             EeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC----ceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence            54 799999987766553211  2478888887654    12234556789999999999986655444   57999999


Q ss_pred             cCCC
Q psy17682        379 TAEP  382 (490)
Q Consensus       379 ~~~~  382 (490)
                      .+++
T Consensus       434 ~~~~  437 (706)
T 2z3z_A          434 GKGS  437 (706)
T ss_dssp             SSCE
T ss_pred             CCCe
Confidence            8775

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.89  E-value=1.4e-20  Score=178.25  Aligned_cols=247  Identities=8%  Similarity=0.013  Sum_probs=184.9

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeC-------CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSE-------DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG  235 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~  235 (490)
                      .....+..++|+|++ +++++++.       ++.|.+||..+++....+.        ....+..++|+|+++.++++..
T Consensus        38 ~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--------~~~~~~~~~~s~dg~~l~v~~~  108 (353)
T 3vgz_A           38 AVGKGAYEMAYSQQE-NALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH--------NDLKPFGATINNTTQTLWFGNT  108 (353)
T ss_dssp             EEESSEEEEEEETTT-TEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE--------ESSCCCSEEEETTTTEEEEEET
T ss_pred             hhccCccceEECCCC-CEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe--------cCCCcceEEECCCCCEEEEEec
Confidence            345678899999998 56666653       5689999999887766543        2345778999999975666666


Q ss_pred             CCCcEEEEECCCCeeEEEEecCCC---------cEEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceeeeeeecCCCce
Q psy17682        236 SDNNVAIWNVGTGEIMIQIECHPD---------IVYSASWNWDGSKLLTTC--KDKKMRIINPRTGAIEEEAVCHEGSKA  304 (490)
Q Consensus       236 ~dg~v~iwd~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~  304 (490)
                      .++.|.+||+.+++.+..+..+..         .+.+++|+|+++++++++  .++.|.+||+.+++....+..+.. .+
T Consensus       109 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~  187 (353)
T 3vgz_A          109 VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK-MS  187 (353)
T ss_dssp             TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT-TC
T ss_pred             CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCC-cc
Confidence            689999999999998888875432         278999999999887776  478899999999988877763433 37


Q ss_pred             eEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec--cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        305 TRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL--DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       305 ~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      ..++|+|+|+.++++.   .++.+.+||..+.+........  .+...+..++|+|+|++++++...++.|.+||..+++
T Consensus       188 ~~~~~s~dg~~l~~~~---~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~  264 (353)
T 3vgz_A          188 TGLALDSEGKRLYTTN---ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN  264 (353)
T ss_dssp             CCCEEETTTTEEEEEC---TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC
T ss_pred             ceEEECCCCCEEEEEc---CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence            8899999999888887   5789999999876533222211  1234577899999999998877777999999999887


Q ss_pred             CeeEEeeeeeCCCceeeEEEeeCceeEE-ee--cceeEEEEecCCCce
Q psy17682        383 PFVHYINTFQTPDPQRGIGMMPKRGCDV-NS--CEIGRFFRLNNSGLC  427 (490)
Q Consensus       383 ~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~--~~~~~~~~~~~~~~~  427 (490)
                      .    +..+..+.+ .+++|+|++..++ +.  ++.+.+|++.+++.+
T Consensus       265 ~----~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~  307 (353)
T 3vgz_A          265 I----LAKVAAPES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV  307 (353)
T ss_dssp             E----EEEEECSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred             E----EEEEEcCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence            2    222333333 6799999997544 33  357788888777633

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.89  E-value=3.5e-20  Score=175.27  Aligned_cols=212  Identities=11%  Similarity=0.058  Sum_probs=143.3

Q ss_pred             cccCCeeEEEECCCCCCEEEEEe-CCCcEEEEECCCCCcccccccceeeec-------ccccCEEEEEEeeCCCCEEEEE
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGS-EDCVVKVWQIPDGGISRTLTEPVVDLL-------YHQRRVGLVLWHPTAQNVLLTA  234 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~p~~~~~l~s~  234 (490)
                      .|...+..++|+|+| ++|++++ .++.|.+|++........+..  ....       .+...+.+++|+|+++ ++++.
T Consensus        83 ~~~~~p~~~a~spdg-~~l~~~~~~~~~v~v~~~~~~g~~~~~~~--~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~  158 (347)
T 3hfq_A           83 APGTPPAYVAVDEAR-QLVYSANYHKGTAEVMKIAADGALTLTDT--VQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVID  158 (347)
T ss_dssp             EESCCCSEEEEETTT-TEEEEEETTTTEEEEEEECTTSCEEEEEE--EECCCCCSSTTCSSCCEEEEEECTTSC-EEEEE
T ss_pred             cCCCCCEEEEECCCC-CEEEEEeCCCCEEEEEEeCCCCCeeecce--eecCCCCCCccccCCCceEEEECCCCc-EEEEe
Confidence            455678899999998 6677666 789999999964322222111  0001       1223588999999997 78877


Q ss_pred             eCCCcEEEEECC-CCeeEE--EEec-CCCcEEEEEEcCCCCEEEE-EeCCCeEEEEeCCC--Cce--eeeeeecCC----
Q psy17682        235 GSDNNVAIWNVG-TGEIMI--QIEC-HPDIVYSASWNWDGSKLLT-TCKDKKMRIINPRT--GAI--EEEAVCHEG----  301 (490)
Q Consensus       235 ~~dg~v~iwd~~-~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~~~--~~~--~~~~~~~~~----  301 (490)
                      ..++.|.+|++. +++...  .+.. ....+..++|+|+|+++++ ...++.+.+|++..  ++.  ...+.....    
T Consensus       159 ~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~  238 (347)
T 3hfq_A          159 LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTA  238 (347)
T ss_dssp             TTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCS
T ss_pred             CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCC
Confidence            778999999998 554322  2222 2346788999999996665 45688999999874  432  222221111    


Q ss_pred             -CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc-CCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        302 -SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD-TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       302 -~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                       ..+..++|+|+|++|+++..  .++.|.+|++............. +...+..++|+|||++|++++..++.|.+|++.
T Consensus       239 ~~~~~~i~~spdG~~l~v~~~--~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d  316 (347)
T 3hfq_A          239 HNGAAAIRLSHDGHFLYVSNR--GYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD  316 (347)
T ss_dssp             CCEEEEEEECTTSCEEEEEEE--TTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             CCcceeEEECCCCCEEEEEeC--CCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence             23788999999997754431  47889999987432222232222 234578999999999997777777999999665


Q ss_pred             C
Q psy17682        380 A  380 (490)
Q Consensus       380 ~  380 (490)
                      .
T Consensus       317 ~  317 (347)
T 3hfq_A          317 L  317 (347)
T ss_dssp             T
T ss_pred             C
Confidence            3

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.89  E-value=1.5e-19  Score=171.98  Aligned_cols=233  Identities=9%  Similarity=0.021  Sum_probs=148.6

Q ss_pred             ccCCeeEEEECCCCCCEEEEEe-CCCcEEEEECCCCCcccccccceee-------ecccccCEEEEEEeeCCCCEEEEEe
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGS-EDCVVKVWQIPDGGISRTLTEPVVD-------LLYHQRRVGLVLWHPTAQNVLLTAG  235 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~-------~~~~~~~v~~~~~~p~~~~~l~s~~  235 (490)
                      +......+++  ++ .+|++++ .++.|.+|++.....+..+......       ...+...+.+++|+|+++.++++..
T Consensus        98 ~~~~p~~~~~--dg-~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~  174 (361)
T 3scy_A           98 MGADPCYLTT--NG-KNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDL  174 (361)
T ss_dssp             SSSCEEEEEE--CS-SEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEET
T ss_pred             CCCCcEEEEE--CC-CEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeC
Confidence            3345666777  56 5555554 6889999999765443322110000       0112334688999999964455555


Q ss_pred             CCCcEEEEECCCCee------E------EE-EecCCCcEEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCcee--eeeeec
Q psy17682        236 SDNNVAIWNVGTGEI------M------IQ-IECHPDIVYSASWNWDGSKLLTTC-KDKKMRIINPRTGAIE--EEAVCH  299 (490)
Q Consensus       236 ~dg~v~iwd~~~~~~------~------~~-~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~--~~~~~~  299 (490)
                      .++.|.+|++.....      +      .. ...+...+..++|+|+|+++++++ .++.|.+||+.+++..  ..+...
T Consensus       175 ~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~  254 (361)
T 3scy_A          175 GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAAD  254 (361)
T ss_dssp             TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESC
T ss_pred             CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecC
Confidence            588999998875431      1      11 223456688999999999887777 6899999999877542  222211


Q ss_pred             C--CCceeEEEEeCCCcEEEEEeCCCc-eeEEEEecCCCC-CCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEE
Q psy17682        300 E--GSKATRAIYLKSGLIFTTGFSKMS-ERQYSLRAPDHL-DEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRY  375 (490)
Q Consensus       300 ~--~~~~~~~~~s~~~~~l~~~~~~~~-~~~i~iwd~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~i  375 (490)
                      .  ......++|+|+|++|+++..  . ++.|.+|++... ..............+..++|+|+|++|++++..++.|.+
T Consensus       255 ~~~~~~~~~i~~spdg~~l~v~~~--~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v  332 (361)
T 3scy_A          255 TVNAQGSGDIHLSPDGKYLYASNR--LKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQI  332 (361)
T ss_dssp             SSCCCCEEEEEECTTSSEEEEEEC--SSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEE
T ss_pred             CCCCCCcccEEECCCCCEEEEECC--CCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEE
Confidence            1  123679999999998876652  2 478999998632 222222222334467889999999999777768899999


Q ss_pred             EEec--CCCCeeEEeeeeeCCCceeeEEEe
Q psy17682        376 FEIT--AEPPFVHYINTFQTPDPQRGIGMM  403 (490)
Q Consensus       376 wd~~--~~~~~~~~~~~~~~~~~i~~~~~s  403 (490)
                      |++.  +++  ...+........+.++.|.
T Consensus       333 ~~~d~~~g~--~~~~~~~~~~~~p~~v~~~  360 (361)
T 3scy_A          333 FERDQATGL--LTDIKKDIKVDKPVCLKFV  360 (361)
T ss_dssp             EEECTTTCC--EEECSCCEECSSEEEEEEE
T ss_pred             EEEECCCCc--EeecceeeeCCCCeEEEEc
Confidence            8765  443  2222211122357778775

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.88  E-value=4.2e-20  Score=173.64  Aligned_cols=268  Identities=8%  Similarity=0.041  Sum_probs=187.5

Q ss_pred             ceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccc-cCCeeEeccccccceEEEEEeeCCC
Q psy17682         58 NVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNS-TANEITISEDYVKEFKEEIRKLKSQ  136 (490)
Q Consensus        58 ~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~~~~~~~~~~~~  136 (490)
                      .+|++++.++.|.+||+.+++.                  ...+....    .. .+..++|+|+..    .++++...+
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~------------------~~~~~~~~----~~~~~~~~~~s~dg~----~l~v~~~~~   55 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAV------------------DKVITIAD----AGPTPMVPMVAPGGR----IAYATVNKS   55 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEE------------------EEEEECTT----CTTCCCCEEECTTSS----EEEEEETTT
T ss_pred             cEEEEcCCCCeEEEEECCCCcE------------------EEEEEcCC----CCCCccceEEcCCCC----EEEEEeCCC
Confidence            5789999999999999987541                  11111000    00 256789999852    234556778


Q ss_pred             ceEEEECCCCCCCCcccCCCCcceee-c----ccCCeeEEEECCCCCCEEEEEe------------CCCcEEEEECCCCC
Q psy17682        137 QALSILPPPSTAPNTGRINADHALVG-G----HKGPVLDIAWSPHDDNVIASGS------------EDCVVKVWQIPDGG  199 (490)
Q Consensus       137 g~i~v~~~~~~~~~~~~~~~~~~~~~-~----h~~~V~~~~~~p~~~~~l~s~~------------~dg~i~iwd~~~~~  199 (490)
                      +.|.+|++.     .++   ....+. +    |...+.+++|+|+| .++++++            .++.|.+||+.+++
T Consensus        56 ~~v~~~d~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~  126 (337)
T 1pby_B           56 ESLVKIDLV-----TGE---TLGRIDLSTPEERVKSLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLS  126 (337)
T ss_dssp             TEEEEEETT-----TCC---EEEEEECCBTTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTE
T ss_pred             CeEEEEECC-----CCC---eEeeEEcCCcccccccccceEECCCC-CEEEEEecccccccccccccCceEEEEECCCCc
Confidence            899999985     222   122222 1    23367899999998 6777775            57999999998776


Q ss_pred             cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC
Q psy17682        200 ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD  279 (490)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  279 (490)
                      ....+.        ....+.+++|+|+++ .++++  ++.|.+||+.+++.+..+..+.. ...+.|+|+++.++..+..
T Consensus       127 ~~~~~~--------~~~~~~~~~~s~dg~-~l~~~--~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~  194 (337)
T 1pby_B          127 RRKAFE--------APRQITMLAWARDGS-KLYGL--GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHES  194 (337)
T ss_dssp             EEEEEE--------CCSSCCCEEECTTSS-CEEEE--SSSEEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTT
T ss_pred             EEEEEe--------CCCCcceeEECCCCC-EEEEe--CCeEEEEECCCCcEeeeeecccc-CCCceeCCCccEEeeeccC
Confidence            554332        234578899999996 55555  68899999999998877764331 1133789998866554432


Q ss_pred             -C-----------------------eEEEEeCCCCceeee-eeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCC
Q psy17682        280 -K-----------------------KMRIINPRTGAIEEE-AVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPD  334 (490)
Q Consensus       280 -g-----------------------~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~  334 (490)
                       +                       .|.+||+.+++.... +..+.. .+..++|+|+|++++++     ++.|.+||+.
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~-----~~~v~~~d~~  268 (337)
T 1pby_B          195 SGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDV-FYFSTAVNPAKTRAFGA-----YNVLESFDLE  268 (337)
T ss_dssp             TTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSS-CEEEEEECTTSSEEEEE-----ESEEEEEETT
T ss_pred             CCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCC-ceeeEEECCCCCEEEEe-----CCeEEEEECC
Confidence             2                       478999999887521 223333 47889999999998877     5789999998


Q ss_pred             CCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        335 HLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       335 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      +.+..   ........+..++|+|+|++|++ ++.++.|++||+.+++
T Consensus       269 ~~~~~---~~~~~~~~~~~~~~s~dg~~l~~-~~~~~~i~v~d~~~~~  312 (337)
T 1pby_B          269 KNASI---KRVPLPHSYYSVNVSTDGSTVWL-GGALGDLAAYDAETLE  312 (337)
T ss_dssp             TTEEE---EEEECSSCCCEEEECTTSCEEEE-ESBSSEEEEEETTTCC
T ss_pred             CCcCc---ceecCCCceeeEEECCCCCEEEE-EcCCCcEEEEECcCCc
Confidence            75432   22233456789999999999855 5779999999999987

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.87  E-value=3.7e-21  Score=186.94  Aligned_cols=209  Identities=12%  Similarity=0.070  Sum_probs=154.5

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcc--------cccccceeeecccccCEEEEEEeeCCCCEEE----
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGIS--------RTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL----  232 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~----  232 (490)
                      ...++.+++++++ .++++++.|+ +++|+.......        ............+...|.+++|+|++. +|+    
T Consensus        36 ~~~~n~lavs~~~-~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~-~lav~~~  112 (434)
T 2oit_A           36 KERSSLLAVSNKY-GLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNL-TLSACMM  112 (434)
T ss_dssp             CSCCBCEEEETTT-TEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSC-EEEEEEE
T ss_pred             CCCccEEEEecCC-CEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCC-EEEEEEe
Confidence            4468899999987 7899999887 899875321100        000000001123567899999999996 777    


Q ss_pred             EEeCCCcEEEEECCCC--------ee---EEEEecCCCcEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeeeeecC
Q psy17682        233 TAGSDNNVAIWNVGTG--------EI---MIQIECHPDIVYSASWNWD-GSKLLTTCKDKKMRIINPRTGAIEEEAVCHE  300 (490)
Q Consensus       233 s~~~dg~v~iwd~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  300 (490)
                      +|+.|+.|++||++++        +.   +..+.+|...|.+++|+|+ +.+|++++.||+|++||++++........|.
T Consensus       113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~  192 (434)
T 2oit_A          113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPST  192 (434)
T ss_dssp             ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGG
T ss_pred             ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCC
Confidence            7888999999998654        22   3445578999999999997 7899999999999999999987665566666


Q ss_pred             CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec-----cCCCceeeeeecCCCCeEEEEecCCCe---
Q psy17682        301 GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-----DTSNGVMFPLYDPDTNLVYLCGKGDSV---  372 (490)
Q Consensus       301 ~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-----~~~~~i~~~~~s~~~~~l~~~g~~dg~---  372 (490)
                      .. +.+++|+|+|++|++|+   .|+.|++||.+ +.....+...     .|...+.++.|++++.++++..+.||.   
T Consensus       193 ~~-v~~v~wspdg~~lasgs---~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~  267 (434)
T 2oit_A          193 VA-VTSVCWSPKGKQLAVGK---QNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLET  267 (434)
T ss_dssp             GC-EEEEEECTTSSCEEEEE---TTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSS
T ss_pred             Cc-eeEEEEcCCCCEEEEEc---CCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCC
Confidence            54 99999999999999998   68999999998 3321111111     112368999999999888666656643   


Q ss_pred             ---EEEEEecCC
Q psy17682        373 ---IRYFEITAE  381 (490)
Q Consensus       373 ---i~iwd~~~~  381 (490)
                         +++|++...
T Consensus       268 ~~~v~i~~l~~~  279 (434)
T 2oit_A          268 SPDVVMALLPKK  279 (434)
T ss_dssp             CCEEEEEECCCT
T ss_pred             CCceEEEEeccC
Confidence               899999865

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.87  E-value=2e-19  Score=171.04  Aligned_cols=273  Identities=13%  Similarity=0.060  Sum_probs=177.1

Q ss_pred             CCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCC----CcEEEEECCCC-Ccccccccce
Q psy17682        134 KSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSED----CVVKVWQIPDG-GISRTLTEPV  208 (490)
Q Consensus       134 ~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~d----g~i~iwd~~~~-~~~~~~~~~~  208 (490)
                      +.++.|.+|.++.   ..+++. .....  |...+..++|+|+| ++|++++.+    +.|.+|++... .....+    
T Consensus        24 ~~~~~i~~~~~d~---~~g~~~-~~~~~--~~~~p~~l~~spdg-~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~----   92 (361)
T 3scy_A           24 GNSKGIYTFRFNE---ETGESL-PLSDA--EVANPSYLIPSADG-KFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL----   92 (361)
T ss_dssp             SSCCEEEEEEEET---TTCCEE-EEEEE--ECSCCCSEEECTTS-SEEEEEECCSSTTCEEEEEEEETTTTEEEEE----
T ss_pred             CCCCCEEEEEEeC---CCCCEE-Eeecc--cCCCCceEEECCCC-CEEEEEEccCCCCCcEEEEEEeCCCCcEEEe----
Confidence            4567888887752   112211 12222  77888899999998 788888775    79999998653 222211    


Q ss_pred             eeecccccCEEEEEEeeCCCCEEEEEe-CCCcEEEEECCCCeeEE----EEe--c--------CCCcEEEEEEcCCCCEE
Q psy17682        209 VDLLYHQRRVGLVLWHPTAQNVLLTAG-SDNNVAIWNVGTGEIMI----QIE--C--------HPDIVYSASWNWDGSKL  273 (490)
Q Consensus       209 ~~~~~~~~~v~~~~~~p~~~~~l~s~~-~dg~v~iwd~~~~~~~~----~~~--~--------~~~~v~~~~~~~~~~~l  273 (490)
                      .....+......+++  +++ +|++++ .++.|.+|++.....+.    .+.  +        +...+.+++|+|+|+++
T Consensus        93 ~~~~~~~~~p~~~~~--dg~-~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l  169 (361)
T 3scy_A           93 NTQKTMGADPCYLTT--NGK-NIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYL  169 (361)
T ss_dssp             EEEECSSSCEEEEEE--CSS-EEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEE
T ss_pred             eEeccCCCCcEEEEE--CCC-EEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEE
Confidence            122334556777777  665 555554 68899999997543221    111  1        12345889999999977


Q ss_pred             EEEe-CCCeEEEEeCCCCce------e------eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe
Q psy17682        274 LTTC-KDKKMRIINPRTGAI------E------EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI  340 (490)
Q Consensus       274 ~~~~-~dg~i~iwd~~~~~~------~------~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~  340 (490)
                      ++++ .++.|++|++.....      +      .......+..+..++|+|+|++++++..  .++.|.+|++.++.. .
T Consensus       170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~--~~~~v~v~~~~~g~~-~  246 (361)
T 3scy_A          170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINE--IGGTVIAFRYADGML-D  246 (361)
T ss_dssp             EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET--TTCEEEEEEEETTEE-E
T ss_pred             EEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcC--CCCeEEEEEecCCce-E
Confidence            6655 478999998875431      1      1222233334789999999997776653  478899999985432 1


Q ss_pred             EEEec----cCCCceeeeeecCCCCeEEEEecC-CCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--
Q psy17682        341 VMVEL----DTSNGVMFPLYDPDTNLVYLCGKG-DSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC--  413 (490)
Q Consensus       341 ~~~~~----~~~~~i~~~~~s~~~~~l~~~g~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--  413 (490)
                      .....    .+......++|+|||++|+++... ++.|.+|++.........+........+.+++|+|+|+++++++  
T Consensus       247 ~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~  326 (361)
T 3scy_A          247 EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRD  326 (361)
T ss_dssp             EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETT
T ss_pred             EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECC
Confidence            11111    122446799999999999777766 78999999973211223333334355788999999998776663  


Q ss_pred             -ceeEEEEecC
Q psy17682        414 -EIGRFFRLNN  423 (490)
Q Consensus       414 -~~~~~~~~~~  423 (490)
                       +.+.+|.++.
T Consensus       327 ~~~v~v~~~d~  337 (361)
T 3scy_A          327 TNVIQIFERDQ  337 (361)
T ss_dssp             TTEEEEEEECT
T ss_pred             CCCEEEEEEEC
Confidence             4678877663

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.86  E-value=3.4e-20  Score=193.06  Aligned_cols=336  Identities=11%  Similarity=0.086  Sum_probs=209.2

Q ss_pred             eEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEE
Q psy17682         49 LVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKE  128 (490)
Q Consensus        49 ~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~  128 (490)
                      .+.|+|++ .+++++ .|++|++||+.++....                ..  .+.  ......+..++|||++  +.+.
T Consensus        20 ~~~~s~dg-~~~~~~-~d~~i~~~~~~~g~~~~----------------~~--~~~--~~~~~~~~~~~~SpDg--~~la   75 (719)
T 1z68_A           20 FPNWISGQ-EYLHQS-ADNNIVLYNIETGQSYT----------------IL--SNR--TMKSVNASNYGLSPDR--QFVY   75 (719)
T ss_dssp             CCEESSSS-EEEEEC-TTSCEEEEESSSCCEEE----------------EE--CHH--HHHTTTCSEEEECTTS--SEEE
T ss_pred             ccEECCCC-eEEEEc-CCCCEEEEEcCCCcEEE----------------EE--ccc--cccccceeeEEECCCC--CeEE
Confidence            77999999 666655 58999999998875211                00  000  0001137899999996  3332


Q ss_pred             EEEee------CCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccc
Q psy17682        129 EIRKL------KSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISR  202 (490)
Q Consensus       129 ~~~~~------~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~  202 (490)
                      .....      +.++.+.+|++.     .++.... ..+   ...+..++|+||| +.|+.+. |+.|++|++.+++...
T Consensus        76 ~~~~~~~~~~~s~~~~i~~~d~~-----~g~~~~~-~~l---~~~~~~~~~SPDG-~~la~~~-~~~i~~~~~~~g~~~~  144 (719)
T 1z68_A           76 LESDYSKLWRYSYTATYYIYDLS-----NGEFVRG-NEL---PRPIQYLCWSPVG-SKLAYVY-QNNIYLKQRPGDPPFQ  144 (719)
T ss_dssp             EEEEEEECSSSCEEEEEEEEETT-----TTEECCS-SCC---CSSBCCEEECSST-TCEEEEE-TTEEEEESSTTSCCEE
T ss_pred             EEecCceeEEeecceEEEEEECC-----CCccccc-eec---CcccccceECCCC-CEEEEEE-CCeEEEEeCCCCCcEE
Confidence            22211      126899999985     2222000 111   2568899999999 6777775 7899999998877643


Q ss_pred             ccccc--eeeeccccc---------CEEEEEEeeCCCCEEEEEeCCC---------------------------------
Q psy17682        203 TLTEP--VVDLLYHQR---------RVGLVLWHPTAQNVLLTAGSDN---------------------------------  238 (490)
Q Consensus       203 ~~~~~--~~~~~~~~~---------~v~~~~~~p~~~~~l~s~~~dg---------------------------------  238 (490)
                      .....  ...+.++..         ...+++|+|+|+ .|++++.|.                                 
T Consensus       145 l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~  223 (719)
T 1z68_A          145 ITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGK-FLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPV  223 (719)
T ss_dssp             CCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSS-EEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCE
T ss_pred             EecCCCcCCeEcccccceeeeecccCcccEEECCCCC-EEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCe
Confidence            21110  001112211         124899999996 787776542                                 


Q ss_pred             -cEEEEECCCCeeE--EE------EecCCCcEEEEEEcCCCCEEEEEeCC----CeEEEEe----CCCCceeeee----e
Q psy17682        239 -NVAIWNVGTGEIM--IQ------IECHPDIVYSASWNWDGSKLLTTCKD----KKMRIIN----PRTGAIEEEA----V  297 (490)
Q Consensus       239 -~v~iwd~~~~~~~--~~------~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd----~~~~~~~~~~----~  297 (490)
                       .|++||+.+++..  ..      +.+|...+..++|+||++++++....    ..|++||    +.+++....+    .
T Consensus       224 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~  303 (719)
T 1z68_A          224 VRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEE  303 (719)
T ss_dssp             EEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEE
T ss_pred             eEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccc
Confidence             7889999887642  12      23577789999999998777664432    2489999    8777665544    2


Q ss_pred             ecCCCcee-----EEEEeCCCcEEEE-EeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecC--
Q psy17682        298 CHEGSKAT-----RAIYLKSGLIFTT-GFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKG--  369 (490)
Q Consensus       298 ~~~~~~~~-----~~~~s~~~~~l~~-~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~--  369 (490)
                      .+... +.     .+.|+|+|+.++. .++......|.+||+.+.. ...+  ..+...+..+.++ +++.|++++..  
T Consensus       304 ~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~l--t~~~~~v~~~~~~-d~~~i~~~~~~~~  378 (719)
T 1z68_A          304 SRTGW-AGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQI--TSGKWEAINIFRV-TQDSLFYSSNEFE  378 (719)
T ss_dssp             CSSSC-SSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEEC--SCSSSCEEEEEEE-CSSEEEEEESCGG
T ss_pred             cCCce-EccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEec--ccCceEEEEEEEE-eCCEEEEEEecCC
Confidence            44443 44     7889999985544 3322235678999987654 2211  1333457777777 88888777765  


Q ss_pred             --CCeEEEEEecC--CCCeeEEeee-ee-CCCceeeEEEeeCceeEEeecc-----eeEEEEecCCC
Q psy17682        370 --DSVIRYFEITA--EPPFVHYINT-FQ-TPDPQRGIGMMPKRGCDVNSCE-----IGRFFRLNNSG  425 (490)
Q Consensus       370 --dg~i~iwd~~~--~~~~~~~~~~-~~-~~~~i~~~~~sp~~~~l~~~~~-----~~~~~~~~~~~  425 (490)
                        ++.+++|.+..  +....+.+.. +. +...+..+.|+|++..++..+.     ...+|++.+++
T Consensus       379 ~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~  445 (719)
T 1z68_A          379 EYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQ  445 (719)
T ss_dssp             GCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCC
T ss_pred             CCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCC
Confidence              58899999875  3211122221 11 2345778999999987664321     34567665555

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.86  E-value=8e-20  Score=175.55  Aligned_cols=243  Identities=11%  Similarity=0.078  Sum_probs=156.3

Q ss_pred             ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEE--EeeCCCCEEEEE-------
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL--WHPTAQNVLLTA-------  234 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~p~~~~~l~s~-------  234 (490)
                      |...+..+.|+|+| ..|+.++.++.|++||+.+++......       .+...+....  ++|++. +++..       
T Consensus        79 ~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~~g~~~~~~~-------~~~~~~~~~~~~~~~dg~-~l~~~~~~~~~~  149 (388)
T 3pe7_A           79 RGDNTFGGFLSPDD-DALFYVKDGRNLMRVDLATLEENVVYQ-------VPAEWVGYGTWVANSDCT-KLVGIEIRREDW  149 (388)
T ss_dssp             SCBCSSSCEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEE-------CCTTEEEEEEEEECTTSS-EEEEEEEEGGGC
T ss_pred             CCCCccceEEcCCC-CEEEEEeCCCeEEEEECCCCcceeeee-------chhhcccccceeECCCCC-eeccccccCccc
Confidence            44444467899998 789999989999999999887544322       2334443333  478885 55532       


Q ss_pred             ---------------eCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC-CCCEEEEEeCC------CeEEEEeCCCCce
Q psy17682        235 ---------------GSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW-DGSKLLTTCKD------KKMRIINPRTGAI  292 (490)
Q Consensus       235 ---------------~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~iwd~~~~~~  292 (490)
                                     ..+..|.+||+.+++..... .+...+..++|+| +|+.|+....+      ..|.++|+..++.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~  228 (388)
T 3pe7_A          150 VPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM  228 (388)
T ss_dssp             CCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC
T ss_pred             ccccccchhhhhhccCCcceEEEEECCCCceEEee-cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce
Confidence                           23467999999988755443 4667789999999 99988887753      3788888876554


Q ss_pred             eeeeeecC-CCceeEEEEeCCCcEEEEEeCC-C-ceeEEEEecCCCCCCCeEEEeccCCC----ceeeeeecCCCCeEEE
Q psy17682        293 EEEAVCHE-GSKATRAIYLKSGLIFTTGFSK-M-SERQYSLRAPDHLDEPIVMVELDTSN----GVMFPLYDPDTNLVYL  365 (490)
Q Consensus       293 ~~~~~~~~-~~~~~~~~~s~~~~~l~~~~~~-~-~~~~i~iwd~~~~~~~~~~~~~~~~~----~i~~~~~s~~~~~l~~  365 (490)
                      .. +..+. ...+....|+|||+.|+..+.. + ....|++||+.+++.... .......    ....+.|+|||+.|++
T Consensus       229 ~~-l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l-~~~~~~~~~~~~~~~~~~spdg~~l~~  306 (388)
T 3pe7_A          229 RK-VKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQL-TSMPACSHLMSNYDGSLMVGDGSDAPV  306 (388)
T ss_dssp             EE-SCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEE-EEECCEEEEEECTTSSEEEEEECCC--
T ss_pred             EE-eeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEE-EcCCCceeeeecCCCCeEccCCCccee
Confidence            33 33222 2236788999999977654421 1 134699999998653222 1111100    0223479999999855


Q ss_pred             Ee--------cCCCeEEEEEecCCCCeeEEeeeeeCCC-----------ceeeEEEeeCceeEEeec---ceeEEEEec
Q psy17682        366 CG--------KGDSVIRYFEITAEPPFVHYINTFQTPD-----------PQRGIGMMPKRGCDVNSC---EIGRFFRLN  422 (490)
Q Consensus       366 ~g--------~~dg~i~iwd~~~~~~~~~~~~~~~~~~-----------~i~~~~~sp~~~~l~~~~---~~~~~~~~~  422 (490)
                      +.        ..+..|++||+.+++.  ..+.  .+..           .+..++|+|||+.++..+   +..++|.+.
T Consensus       307 ~~~~~~~~~~~~~~~i~~~d~~~~~~--~~l~--~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~  381 (388)
T 3pe7_A          307 DVQDDSGYKIENDPFLYVFNMKNGTQ--HRVA--RHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT  381 (388)
T ss_dssp             ----------CCCCEEEEEETTTTEE--EEEE--ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred             EeeeccccccCCCCEEEEEeccCCce--EEec--cccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence            43        4567899999988751  2222  2222           478899999998766543   244555543

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.86  E-value=8.7e-20  Score=172.43  Aligned_cols=237  Identities=8%  Similarity=0.036  Sum_probs=167.9

Q ss_pred             EEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe
Q psy17682        170 DIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE  249 (490)
Q Consensus       170 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~  249 (490)
                      ++++++++ .++++++.+++|.+||+.+++....+..      +....+..++|+|+++.+++++..++.|.+||+.+++
T Consensus         4 g~~~~~~~-~~~v~~~~~~~v~~~d~~~~~~~~~~~~------~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~   76 (349)
T 1jmx_B            4 GPALKAGH-EYMIVTNYPNNLHVVDVASDTVYKSCVM------PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK   76 (349)
T ss_dssp             CCCCCTTC-EEEEEEETTTEEEEEETTTTEEEEEEEC------SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred             cccccCCC-EEEEEeCCCCeEEEEECCCCcEEEEEec------CCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc
Confidence            45677766 8999999999999999988876554431      1112577899999996455666678999999999998


Q ss_pred             eEEEEecCC------CcEEEEEEcCCCCEEEEEeCC------------CeEEEEeCCCCcee---eeeeecCCCceeEEE
Q psy17682        250 IMIQIECHP------DIVYSASWNWDGSKLLTTCKD------------KKMRIINPRTGAIE---EEAVCHEGSKATRAI  308 (490)
Q Consensus       250 ~~~~~~~~~------~~v~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~---~~~~~~~~~~~~~~~  308 (490)
                      .+..+....      ..+..++|+|+|+++++++.+            +.|.+||+.+++..   .....+.  .+.+++
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~~  154 (349)
T 1jmx_B           77 NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR--QVYLMR  154 (349)
T ss_dssp             EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS--SCCCEE
T ss_pred             EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC--ccccee
Confidence            887776322      236789999999999998865            89999999885433   3333322  378899


Q ss_pred             EeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc------------------------------------------
Q psy17682        309 YLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD------------------------------------------  346 (490)
Q Consensus       309 ~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~------------------------------------------  346 (490)
                      |+|+|+ +++++   .+  |.+||..+++....+....                                          
T Consensus       155 ~s~dg~-l~~~~---~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  228 (349)
T 1jmx_B          155 AADDGS-LYVAG---PD--IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT  228 (349)
T ss_dssp             ECTTSC-EEEES---SS--EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC
T ss_pred             ECCCCc-EEEcc---Cc--EEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc
Confidence            999999 44443   22  9999988755322111000                                          


Q ss_pred             ------------------------CCCceeeeeecC-CCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEE
Q psy17682        347 ------------------------TSNGVMFPLYDP-DTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIG  401 (490)
Q Consensus       347 ------------------------~~~~i~~~~~s~-~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~  401 (490)
                                              ....+..++|+| ++++++++   ++.|.+||+.+++    .+..+..+..+.+++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~----~~~~~~~~~~~~~~~  301 (349)
T 1jmx_B          229 ADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRK----LIKAANLDHTYYCVA  301 (349)
T ss_dssp             CEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---ESEEEEEETTTTE----EEEEEECSSCCCEEE
T ss_pred             cccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE---cCeEEEEECccCe----EEEEEcCCCCccceE
Confidence                                    001345667889 99998544   8899999999876    333334445678999


Q ss_pred             EeeCceeEEee--cceeEEEEecCCCceE
Q psy17682        402 MMPKRGCDVNS--CEIGRFFRLNNSGLCQ  428 (490)
Q Consensus       402 ~sp~~~~l~~~--~~~~~~~~~~~~~~~~  428 (490)
                      |+|++..++++  ++.+.+|++.+.+.+.
T Consensus       302 ~s~dg~~l~~~~~~~~v~v~d~~~~~~~~  330 (349)
T 1jmx_B          302 FDKKGDKLYLGGTFNDLAVFNPDTLEKVK  330 (349)
T ss_dssp             ECSSSSCEEEESBSSEEEEEETTTTEEEE
T ss_pred             ECCCCCEEEEecCCCeEEEEeccccceee
Confidence            99998766655  3478889988776333

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.84  E-value=2.4e-19  Score=169.34  Aligned_cols=201  Identities=9%  Similarity=0.006  Sum_probs=142.3

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC---------
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD---------  237 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d---------  237 (490)
                      .+..++|+|++..+++++..++.|.+||+.+++....+..+.. -..+...+.+++|+|+++ ++++++.+         
T Consensus        44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~-~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~~~  121 (349)
T 1jmx_B           44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSV-PGEVGRSMYSFAISPDGK-EVYATVNPTQRLNDHYV  121 (349)
T ss_dssp             SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCS-TTEEEECSSCEEECTTSS-EEEEEEEEEEECSSCEE
T ss_pred             CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccc-cccccccccceEECCCCC-EEEEEcccccccccccc
Confidence            4568899999844556667789999999988876544321000 000023477899999996 77777654         


Q ss_pred             ---CcEEEEECCCCe---eEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecC-----------
Q psy17682        238 ---NNVAIWNVGTGE---IMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHE-----------  300 (490)
Q Consensus       238 ---g~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----------  300 (490)
                         +.|.+||+.+++   .+..+. +...+.+++|+|+|+ +++++  +.|++||+.+++....+..+.           
T Consensus       122 ~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  197 (349)
T 1jmx_B          122 VKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDV  197 (349)
T ss_dssp             ECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBC
T ss_pred             cCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccc
Confidence               899999998743   334444 344688999999999 55554  449999999888766554221           


Q ss_pred             --------------------------------------------------------CCceeEEEEeC-CCcEEEEEeCCC
Q psy17682        301 --------------------------------------------------------GSKATRAIYLK-SGLIFTTGFSKM  323 (490)
Q Consensus       301 --------------------------------------------------------~~~~~~~~~s~-~~~~l~~~~~~~  323 (490)
                                                                              +..+..++++| +|++++++    
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~----  273 (349)
T 1jmx_B          198 LYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV----  273 (349)
T ss_dssp             CCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE----
T ss_pred             eeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE----
Confidence                                                                    00244567789 99988877    


Q ss_pred             ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        324 SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       324 ~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                       ++.|.+||+.+.+.   .........+..++|+|+|++|++ ++.++.|++||+.+++
T Consensus       274 -~~~v~~~d~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~-~~~~~~v~v~d~~~~~  327 (349)
T 1jmx_B          274 -LNRLAKYDLKQRKL---IKAANLDHTYYCVAFDKKGDKLYL-GGTFNDLAVFNPDTLE  327 (349)
T ss_dssp             -ESEEEEEETTTTEE---EEEEECSSCCCEEEECSSSSCEEE-ESBSSEEEEEETTTTE
T ss_pred             -cCeEEEEECccCeE---EEEEcCCCCccceEECCCCCEEEE-ecCCCeEEEEeccccc
Confidence             56899999987542   222233345788999999999955 6778999999998876

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.83  E-value=7.7e-18  Score=175.46  Aligned_cols=329  Identities=12%  Similarity=0.043  Sum_probs=198.6

Q ss_pred             ceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccccc
Q psy17682         45 RRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVK  124 (490)
Q Consensus        45 ~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  124 (490)
                      .....+.|+|++ .+++++  |++|++||+.++...                 .. +..............++||||+  
T Consensus        17 ~~~~~~~w~~dg-~~~~~~--~~~i~~~~~~~~~~~-----------------~~-~~~~~~~~~~~~~~~~~~Spdg--   73 (740)
T 4a5s_A           17 LKLYSLRWISDH-EYLYKQ--ENNILVFNAEYGNSS-----------------VF-LENSTFDEFGHSINDYSISPDG--   73 (740)
T ss_dssp             CCCCCEEECSSS-EEEEEE--TTEEEEEETTTCCEE-----------------EE-ECTTTTTTCCSCCCEEEECTTS--
T ss_pred             ccccccEECCCC-cEEEEc--CCcEEEEECCCCceE-----------------EE-EechhhhhhcccccceEECCCC--
Confidence            346689999999 788876  899999999987610                 00 1110000111123458899996  


Q ss_pred             ceEEEEEee------CCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC
Q psy17682        125 EFKEEIRKL------KSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG  198 (490)
Q Consensus       125 ~~~~~~~~~------~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~  198 (490)
                      +........      +..+.+.+|++.     .++.    ..+..|.+.+..++||||| +.||.+. |+.|++|++.++
T Consensus        74 ~~l~~~~~~~~~~r~~~~~~~~~~d~~-----~~~~----~~l~~~~~~~~~~~~SPdG-~~la~~~-~~~i~~~~~~~~  142 (740)
T 4a5s_A           74 QFILLEYNYVKQWRHSYTASYDIYDLN-----KRQL----ITEERIPNNTQWVTWSPVG-HKLAYVW-NNDIYVKIEPNL  142 (740)
T ss_dssp             SEEEEEEEEEECSSSCEEEEEEEEETT-----TTEE----CCSSCCCTTEEEEEECSST-TCEEEEE-TTEEEEESSTTS
T ss_pred             CEEEEEECCeeeEEEccceEEEEEECC-----CCcE----EEcccCCCcceeeEECCCC-CEEEEEE-CCeEEEEECCCC
Confidence            222211110      112677899985     3322    2355678899999999999 6777764 689999999887


Q ss_pred             Ccccccccc--eeeecccc---------cCEEEEEEeeCCCCEEEEEeCCC-----------------------------
Q psy17682        199 GISRTLTEP--VVDLLYHQ---------RRVGLVLWHPTAQNVLLTAGSDN-----------------------------  238 (490)
Q Consensus       199 ~~~~~~~~~--~~~~~~~~---------~~v~~~~~~p~~~~~l~s~~~dg-----------------------------  238 (490)
                      +..+.....  ...+.++.         +....+.|+|||+ .|+.++.|.                             
T Consensus       143 ~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~-~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~  221 (740)
T 4a5s_A          143 PSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGT-FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKA  221 (740)
T ss_dssp             CCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSS-EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBT
T ss_pred             ceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCC-EEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCC
Confidence            654321110  00111121         1223589999996 677664321                             


Q ss_pred             -------cEEEEECCC---Ce--eEEEEe------cCCCcEEEEEEcCCCCEEEEEeC----CCeEEEEeCCCCc----e
Q psy17682        239 -------NVAIWNVGT---GE--IMIQIE------CHPDIVYSASWNWDGSKLLTTCK----DKKMRIINPRTGA----I  292 (490)
Q Consensus       239 -------~v~iwd~~~---~~--~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~----~  292 (490)
                             .|++||+.+   ++  ....+.      +|...+..++|+|||+.++....    +..|++||+.+++    +
T Consensus       222 G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~  301 (740)
T 4a5s_A          222 GAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNC  301 (740)
T ss_dssp             TSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEE
T ss_pred             cCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccce
Confidence                   488899988   73  233343      26777999999999997666543    3379999999887    2


Q ss_pred             e--eee--eecCCCc----eeEEEEeCCCcEEE-EEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeE
Q psy17682        293 E--EEA--VCHEGSK----ATRAIYLKSGLIFT-TGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLV  363 (490)
Q Consensus       293 ~--~~~--~~~~~~~----~~~~~~s~~~~~l~-~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  363 (490)
                      .  ..+  ..+....    .....|+|||+.++ ..+++.....|++||...+... .+.  .....+..+. .+|++.|
T Consensus       302 ~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT--~g~~~v~~~~-~~d~~~i  377 (740)
T 4a5s_A          302 LVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FIT--KGTWEVIGIE-ALTSDYL  377 (740)
T ss_dssp             CGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESC--CSSSCEEEEE-EECSSEE
T ss_pred             eEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecc--cCCEEEEEEE-EEeCCEE
Confidence            2  222  2333321    23678999999877 6665445678999999865432 111  2223344443 3558888


Q ss_pred             EEEecC----CCeEEEEEecCCCCeeE-Eeeee--eCCCceeeEEEeeCceeEEee
Q psy17682        364 YLCGKG----DSVIRYFEITAEPPFVH-YINTF--QTPDPQRGIGMMPKRGCDVNS  412 (490)
Q Consensus       364 ~~~g~~----dg~i~iwd~~~~~~~~~-~~~~~--~~~~~i~~~~~sp~~~~l~~~  412 (490)
                      ++++..    .+...||.+........ .+...  ........+.|||++.+++..
T Consensus       378 ~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~  433 (740)
T 4a5s_A          378 YYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLR  433 (740)
T ss_dssp             EEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEE
T ss_pred             EEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEE
Confidence            777765    34556666554321111 22110  112467889999999876644

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.83  E-value=4.3e-18  Score=162.04  Aligned_cols=255  Identities=8%  Similarity=0.028  Sum_probs=169.7

Q ss_pred             ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC-CCCcccccccceeeecccccCEEEEEEeeCCCC-EEEEEe------
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP-DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQN-VLLTAG------  235 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s~~------  235 (490)
                      +...+..++|+|+| ++|++++.+ .|.+|++. +++......     ...+ +.+.+++|+|+++. +++++.      
T Consensus        38 ~~~~~~~~a~spdg-~~l~~~~~~-~v~~~~~~~~g~~~~~~~-----~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~  109 (365)
T 1jof_A           38 QDEPISWMTFDHER-KNIYGAAMK-KWSSFAVKSPTEIVHEAS-----HPIG-GHPRANDADTNTRAIFLLAAKQPPYAV  109 (365)
T ss_dssp             TTCCCSEEEECTTS-SEEEEEEBT-EEEEEEEEETTEEEEEEE-----EECC-SSGGGGCTTSCCEEEEEEECSSTTCCE
T ss_pred             CCCCCcEEEECCCC-CEEEEEccc-eEEEEEECCCCCEEEeeE-----eecC-CCCccEEECCCCCEEEEEEecCCccee
Confidence            33568899999998 788888887 99999987 665432111     1111 22456899999953 244442      


Q ss_pred             -------CCCcEEEEECC-CCeeEEEEe----cCCCcEEEEEEcCCCCEEEEEeC-CCeEEEEeCC-CCcee--eeeeec
Q psy17682        236 -------SDNNVAIWNVG-TGEIMIQIE----CHPDIVYSASWNWDGSKLLTTCK-DKKMRIINPR-TGAIE--EEAVCH  299 (490)
Q Consensus       236 -------~dg~v~iwd~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~-~~~~~--~~~~~~  299 (490)
                             .++.+.+|++. +++....+.    .+...+.+++|+|+|++++++.. ++.|++||+. +++..  ..+...
T Consensus       110 ~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~  189 (365)
T 1jof_A          110 YANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAP  189 (365)
T ss_dssp             EEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS
T ss_pred             ccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecC
Confidence                   68999999997 465544443    24567999999999998887764 6899999998 67643  223221


Q ss_pred             C-CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCC--CCCCe---EEEeccCC----C-------ceeeee-ecCCCC
Q psy17682        300 E-GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDH--LDEPI---VMVELDTS----N-------GVMFPL-YDPDTN  361 (490)
Q Consensus       300 ~-~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~--~~~~~---~~~~~~~~----~-------~i~~~~-~s~~~~  361 (490)
                      . +..+..++|+|+|++++++..  .++.+.+|+++.  +....   .+......    .       .+..++ |+|||+
T Consensus       190 ~~g~~p~~~~~spdg~~l~v~~~--~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~  267 (365)
T 1jof_A          190 DPGDHPRWVAMHPTGNYLYALME--AGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK  267 (365)
T ss_dssp             STTCCEEEEEECTTSSEEEEEET--TTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSS
T ss_pred             CCCCCCCEeEECCCCCEEEEEEC--CCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCC
Confidence            1 334889999999998877753  357889987653  32111   11112111    1       478899 999999


Q ss_pred             eEEEEecCCC-----eEEEEEec-CCCCeeEEeeeee-CCCceeeEEEee---CceeEEeec---ceeEEEEecCCCceE
Q psy17682        362 LVYLCGKGDS-----VIRYFEIT-AEPPFVHYINTFQ-TPDPQRGIGMMP---KRGCDVNSC---EIGRFFRLNNSGLCQ  428 (490)
Q Consensus       362 ~l~~~g~~dg-----~i~iwd~~-~~~~~~~~~~~~~-~~~~i~~~~~sp---~~~~l~~~~---~~~~~~~~~~~~~~~  428 (490)
                      +|+++...+.     .|.+|++. +++ +........ .......++|+|   ||+++++++   +.+++|++.... +.
T Consensus       268 ~l~v~~~~~~~~~~~~i~v~~~~~~g~-~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~-l~  345 (365)
T 1jof_A          268 YMFASSRANKFELQGYIAGFKLRDCGS-IEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF-LH  345 (365)
T ss_dssp             EEEEEEEESSTTSCCEEEEEEECTTSC-EEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE-EE
T ss_pred             EEEEECCCCCCCCCCeEEEEEECCCCC-EEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhh-Cc
Confidence            9976554333     89999997 444 222111122 234567899999   788877663   478999998764 55


Q ss_pred             EE
Q psy17682        429 VV  430 (490)
Q Consensus       429 ~i  430 (490)
                      .+
T Consensus       346 ~~  347 (365)
T 1jof_A          346 RV  347 (365)
T ss_dssp             EE
T ss_pred             ee
Confidence            44

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.83  E-value=8.4e-18  Score=160.02  Aligned_cols=207  Identities=9%  Similarity=0.022  Sum_probs=136.4

Q ss_pred             eEEEECCCCCC-EEEEEe-------------CCCcEEEEECCC-CCcccccccceeee-cccccCEEEEEEeeCCCCEEE
Q psy17682        169 LDIAWSPHDDN-VIASGS-------------EDCVVKVWQIPD-GGISRTLTEPVVDL-LYHQRRVGLVLWHPTAQNVLL  232 (490)
Q Consensus       169 ~~~~~~p~~~~-~l~s~~-------------~dg~i~iwd~~~-~~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~  232 (490)
                      .+++|+|+|.. +++++.             .+|++.+|++.. ++....+.    .+ ..+...+.+++|+|+|+ +++
T Consensus        86 ~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~----~~~~~~~~~~~~~~~spdG~-~l~  160 (365)
T 1jof_A           86 RANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQ----NYEYQENTGIHGMVFDPTET-YLY  160 (365)
T ss_dssp             GGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEE----EEECCTTCCEEEEEECTTSS-EEE
T ss_pred             ccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEe----eEEeCCCCcceEEEECCCCC-EEE
Confidence            34678887722 344442             689999999974 54332211    11 12456789999999996 666


Q ss_pred             EEe-CCCcEEEEECC-CCeeE--EEEe--cCCCcEEEEEEcCCCCEEEEEeC-CCeEEEEeCC--CCceee---eeeec-
Q psy17682        233 TAG-SDNNVAIWNVG-TGEIM--IQIE--CHPDIVYSASWNWDGSKLLTTCK-DKKMRIINPR--TGAIEE---EAVCH-  299 (490)
Q Consensus       233 s~~-~dg~v~iwd~~-~~~~~--~~~~--~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~--~~~~~~---~~~~~-  299 (490)
                      ++. .++.|++||+. +++..  ..+.  .+...+..++|+|+|+++++++. ++.|.+|++.  +++...   .+... 
T Consensus       161 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~  240 (365)
T 1jof_A          161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIP  240 (365)
T ss_dssp             EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred             EEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCC
Confidence            655 46899999998 67643  3343  24567999999999999888775 6899999765  455421   22211 


Q ss_pred             ---CC-C-------ceeEEE-EeCCCcEEEEEeCCCce----eEEEEecCCCCCCCeEEE-ecc-CCCceeeeeecC---
Q psy17682        300 ---EG-S-------KATRAI-YLKSGLIFTTGFSKMSE----RQYSLRAPDHLDEPIVMV-ELD-TSNGVMFPLYDP---  358 (490)
Q Consensus       300 ---~~-~-------~~~~~~-~s~~~~~l~~~~~~~~~----~~i~iwd~~~~~~~~~~~-~~~-~~~~i~~~~~s~---  358 (490)
                         .+ .       .+..++ |+|+|++|+++... .+    +.|.+|++.......... ... +......++|+|   
T Consensus       241 ~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~-~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~  319 (365)
T 1jof_A          241 PGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA-NKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPW  319 (365)
T ss_dssp             TTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE-SSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTT
T ss_pred             CCcCCcccccccccccccEEEECCCCCEEEEECCC-CCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCc
Confidence               01 1       378899 99999988766521 11    289999986322222211 122 334567889999   


Q ss_pred             CCCeEEEEecCCCeEEEEEecCC
Q psy17682        359 DTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       359 ~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      ||++|++++..++.|.+|++...
T Consensus       320 dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          320 SDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             CTTEEEEECSSSCEEEEEEEETT
T ss_pred             CCCEEEEEEcCCCeEEEEEEchh
Confidence            89999665555699999999876

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.82  E-value=4.6e-19  Score=184.49  Aligned_cols=279  Identities=14%  Similarity=0.122  Sum_probs=183.4

Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccC---CeeEEEECCCCCCEEEEEeC----
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKG---PVLDIAWSPHDDNVIASGSE----  186 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~---~V~~~~~~p~~~~~l~s~~~----  186 (490)
                      ..++|+|+.  +    +.....++.+.+|+..     .++   ....+.+|..   .|.+++|+||| ++|++++.    
T Consensus        19 ~~~~~s~dg--~----~~~~~~d~~i~~~~~~-----~g~---~~~~~~~~~~~~~~~~~~~~SpDg-~~la~~~~~~~~   83 (719)
T 1z68_A           19 FFPNWISGQ--E----YLHQSADNNIVLYNIE-----TGQ---SYTILSNRTMKSVNASNYGLSPDR-QFVYLESDYSKL   83 (719)
T ss_dssp             CCCEESSSS--E----EEEECTTSCEEEEESS-----SCC---EEEEECHHHHHTTTCSEEEECTTS-SEEEEEEEEEEC
T ss_pred             CccEECCCC--e----EEEEcCCCCEEEEEcC-----CCc---EEEEEccccccccceeeEEECCCC-CeEEEEecCcee
Confidence            478899986  2    2334468999999985     222   2334445543   49999999999 78888766    


Q ss_pred             -----CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE-ecCCCc
Q psy17682        187 -----DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI-ECHPDI  260 (490)
Q Consensus       187 -----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~  260 (490)
                           ++.|++||+.+++.+....        ....+..++|+|+|+ .|+.+. ++.|++||+.+++..... .++...
T Consensus        84 ~~~s~~~~i~~~d~~~g~~~~~~~--------l~~~~~~~~~SPDG~-~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~  153 (719)
T 1z68_A           84 WRYSYTATYYIYDLSNGEFVRGNE--------LPRPIQYLCWSPVGS-KLAYVY-QNNIYLKQRPGDPPFQITFNGRENK  153 (719)
T ss_dssp             SSSCEEEEEEEEETTTTEECCSSC--------CCSSBCCEEECSSTT-CEEEEE-TTEEEEESSTTSCCEECCCCCBTTT
T ss_pred             EEeecceEEEEEECCCCcccccee--------cCcccccceECCCCC-EEEEEE-CCeEEEEeCCCCCcEEEecCCCcCC
Confidence                 7899999998886521111        124588899999996 677665 789999999888765432 222222


Q ss_pred             E-----------------EEEEEcCCCCEEEEEeCCC----------------------------------eEEEEeCCC
Q psy17682        261 V-----------------YSASWNWDGSKLLTTCKDK----------------------------------KMRIINPRT  289 (490)
Q Consensus       261 v-----------------~~~~~~~~~~~l~~~~~dg----------------------------------~i~iwd~~~  289 (490)
                      +                 .+++|+|||+.|++++.|.                                  .|++||+.+
T Consensus       154 v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~  233 (719)
T 1z68_A          154 IFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTY  233 (719)
T ss_dssp             EEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSC
T ss_pred             eEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCC
Confidence            2                 4899999999999988652                                  789999998


Q ss_pred             Ccee--ee------eeecCCCceeEEEEeCCCcEEEEEeC-CCceeEEEEec----CCCCCCCeEEE--eccCCCcee--
Q psy17682        290 GAIE--EE------AVCHEGSKATRAIYLKSGLIFTTGFS-KMSERQYSLRA----PDHLDEPIVMV--ELDTSNGVM--  352 (490)
Q Consensus       290 ~~~~--~~------~~~~~~~~~~~~~~s~~~~~l~~~~~-~~~~~~i~iwd----~~~~~~~~~~~--~~~~~~~i~--  352 (490)
                      ++..  ..      +..+.. .+..++|+||++++++... ......|.+||    ..+++......  ...+...+.  
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~  312 (719)
T 1z68_A          234 PAYVGPQEVPVPAMIASSDY-YFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGF  312 (719)
T ss_dssp             HHHHCCEECCCCHHHHTSCE-EEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSS
T ss_pred             CCccceeEccCCccCCCCcc-eEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccc
Confidence            7653  11      112333 3789999999988777542 12345789999    76654332221  013334455  


Q ss_pred             ---eeeecCCCCeEEE-EecCCC--eEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec-------ceeEEE
Q psy17682        353 ---FPLYDPDTNLVYL-CGKGDS--VIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC-------EIGRFF  419 (490)
Q Consensus       353 ---~~~~s~~~~~l~~-~g~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-------~~~~~~  419 (490)
                         .+.|+|||+.+++ ++..+|  .|++||+.+++  ...+.  .+...+..+.++ ++..++...       ...++|
T Consensus       313 ~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~--~~~lt--~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~  387 (719)
T 1z68_A          313 FVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN--AIQIT--SGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIY  387 (719)
T ss_dssp             SCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT--CEECS--CSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEE
T ss_pred             cCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc--eEecc--cCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEE
Confidence               7899999997654 344555  56667776655  22332  233357777777 665544332       346888


Q ss_pred             EecC
Q psy17682        420 RLNN  423 (490)
Q Consensus       420 ~~~~  423 (490)
                      .+..
T Consensus       388 ~~~~  391 (719)
T 1z68_A          388 RISI  391 (719)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            8764

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.80  E-value=2.3e-18  Score=174.61  Aligned_cols=233  Identities=10%  Similarity=-0.036  Sum_probs=161.8

Q ss_pred             ccCCeeEEEECCCCCCEEEEEeC-CCcEEEEECCCCCcccccccceeeecccc-cCEEEEEEeeCCCCEEEEEeC---CC
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGSE-DCVVKVWQIPDGGISRTLTEPVVDLLYHQ-RRVGLVLWHPTAQNVLLTAGS---DN  238 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~s~~~---dg  238 (490)
                      +..+|++++|+||| +.||+++. ||+++||++.+++.. .       +..|. ..+..++|+|+ + ++++++.   +.
T Consensus        20 ~~~~~~~~~~~~DG-~~la~~s~~~g~~~lw~~~~g~~~-~-------lt~~~~~~~~~~~~spd-~-~l~~~~~~~g~~   88 (582)
T 3o4h_A           20 IAVEKYSLQGVVDG-DKLLVVGFSEGSVNAYLYDGGETV-K-------LNREPINSVLDPHYGVG-R-VILVRDVSKGAE   88 (582)
T ss_dssp             HHSCEEEEEEEETT-TEEEEEEEETTEEEEEEEETTEEE-E-------CCSSCCSEECEECTTCS-E-EEEEEECSTTSC
T ss_pred             hccchheeecCCCC-CeEEEEEccCCceeEEEEcCCCcE-e-------eecccccccccccCCCC-e-EEEEeccCCCCc
Confidence            46789999999999 77887776 999999998555432 2       22344 58999999998 4 7777765   45


Q ss_pred             cEEEEECCC---CeeEEEEecCCCcEEEEEEcCCCCE-EEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc
Q psy17682        239 NVAIWNVGT---GEIMIQIECHPDIVYSASWNWDGSK-LLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL  314 (490)
Q Consensus       239 ~v~iwd~~~---~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~  314 (490)
                      ..++|.+..   +... .+.. ...+...+|+|+++. +++.+.++.+.+||+.+++.......+.    ..++|+|||+
T Consensus        89 ~~~l~~~~~~~~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~----~~~~~spDG~  162 (582)
T 3o4h_A           89 QHALFKVNTSRPGEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG----FGFVSDIRGD  162 (582)
T ss_dssp             CEEEEEEETTSTTCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS----CEEEEEEETT
T ss_pred             ceEEEEEeccCCCccc-cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC----ceEEECCCCC
Confidence            556655432   2222 3432 223456788888853 3444445556699999887655443322    7889999999


Q ss_pred             EEEEEeCC-CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC--eEEEEEecCCCCeeEEeeee
Q psy17682        315 IFTTGFSK-MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS--VIRYFEITAEPPFVHYINTF  391 (490)
Q Consensus       315 ~l~~~~~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg--~i~iwd~~~~~~~~~~~~~~  391 (490)
                      ++++++.+ +....|++||+.+++.. .  ...+...+..++|||||+.|+ ++..++  .|++||+.+++..  .+.  
T Consensus       163 ~la~~~~~~~~~~~i~~~d~~~g~~~-~--l~~~~~~~~~~~~SpDG~~l~-~~~~~~~~~i~~~d~~~~~~~--~~~--  234 (582)
T 3o4h_A          163 LIAGLGFFGGGRVSLFTSNLSSGGLR-V--FDSGEGSFSSASISPGMKVTA-GLETAREARLVTVDPRDGSVE--DLE--  234 (582)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCCE-E--ECCSSCEEEEEEECTTSCEEE-EEECSSCEEEEEECTTTCCEE--ECC--
T ss_pred             EEEEEEEcCCCCeEEEEEcCCCCCce-E--eecCCCccccceECCCCCEEE-EccCCCeeEEEEEcCCCCcEE--Ecc--
Confidence            99977632 11278999999876532 2  234556689999999999995 777788  8999999988732  222  


Q ss_pred             eCCCceeeEE--------EeeCceeEEee--cceeEEEEe
Q psy17682        392 QTPDPQRGIG--------MMPKRGCDVNS--CEIGRFFRL  421 (490)
Q Consensus       392 ~~~~~i~~~~--------~sp~~~~l~~~--~~~~~~~~~  421 (490)
                      .+...+.+++        |+|||.+++++  ++..++|.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~  274 (582)
T 3o4h_A          235 LPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID  274 (582)
T ss_dssp             CSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred             CCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence            2334566667        99999776665  457889987

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.77  E-value=5.2e-17  Score=169.19  Aligned_cols=252  Identities=9%  Similarity=0.037  Sum_probs=164.9

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC--------
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD--------  237 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d--------  237 (490)
                      ....++.|+|+| .+++++  |++|++||+.+++....+....  ...+......++|+|||+ .|+.++.+        
T Consensus        17 ~~~~~~~w~~dg-~~~~~~--~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Spdg~-~l~~~~~~~~~~r~~~   90 (740)
T 4a5s_A           17 LKLYSLRWISDH-EYLYKQ--ENNILVFNAEYGNSSVFLENST--FDEFGHSINDYSISPDGQ-FILLEYNYVKQWRHSY   90 (740)
T ss_dssp             CCCCCEEECSSS-EEEEEE--TTEEEEEETTTCCEEEEECTTT--TTTCCSCCCEEEECTTSS-EEEEEEEEEECSSSCE
T ss_pred             ccccccEECCCC-cEEEEc--CCcEEEEECCCCceEEEEechh--hhhhcccccceEECCCCC-EEEEEECCeeeEEEcc
Confidence            346689999998 788886  8999999999987644332100  001112234589999996 77777765        


Q ss_pred             -CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee-ecCCC-------------
Q psy17682        238 -NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV-CHEGS-------------  302 (490)
Q Consensus       238 -g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~-------------  302 (490)
                       +.+.+||+.+++.. .+..+...+...+|||||+.|+.+. ++.|++||+.+++..+... ++...             
T Consensus        91 ~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee  168 (740)
T 4a5s_A           91 TASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEE  168 (740)
T ss_dssp             EEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHH
T ss_pred             ceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccch
Confidence             56779999998754 3566778899999999999999885 6899999998877544222 22211             


Q ss_pred             ---ceeEEEEeCCCcEEEEEeCCC---------------------------------ceeEEEEecCCC---CCCCeEEE
Q psy17682        303 ---KATRAIYLKSGLIFTTGFSKM---------------------------------SERQYSLRAPDH---LDEPIVMV  343 (490)
Q Consensus       303 ---~~~~~~~s~~~~~l~~~~~~~---------------------------------~~~~i~iwd~~~---~~~~~~~~  343 (490)
                         ....+.|||||+.|+..+.+.                                 ....|++||+.+   +.......
T Consensus       169 ~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~  248 (740)
T 4a5s_A          169 VFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQ  248 (740)
T ss_dssp             TSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEE
T ss_pred             hcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEE
Confidence               123588999999998764211                                 123688899987   53211211


Q ss_pred             ec------cCCCceeeeeecCCCCeEEEEe---cCCCeEEEEEecCCCC----e-eEEeeeeeCCCce-----eeEEEee
Q psy17682        344 EL------DTSNGVMFPLYDPDTNLVYLCG---KGDSVIRYFEITAEPP----F-VHYINTFQTPDPQ-----RGIGMMP  404 (490)
Q Consensus       344 ~~------~~~~~i~~~~~s~~~~~l~~~g---~~dg~i~iwd~~~~~~----~-~~~~~~~~~~~~i-----~~~~~sp  404 (490)
                      ..      .+...+..++|+|||+.++...   +.+..|++||+.++++    . ...+....+...+     ..++|+|
T Consensus       249 l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fsp  328 (740)
T 4a5s_A          249 ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTL  328 (740)
T ss_dssp             ECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECT
T ss_pred             ecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcC
Confidence            11      1455688999999999664433   2345799999998862    0 1111111233333     3789999


Q ss_pred             CceeEE-ee---cc--eeEEEEecCCC
Q psy17682        405 KRGCDV-NS---CE--IGRFFRLNNSG  425 (490)
Q Consensus       405 ~~~~l~-~~---~~--~~~~~~~~~~~  425 (490)
                      ||+.++ ..   ++  .+.+|++..+.
T Consensus       329 DG~~l~~~~s~~~G~~~l~~~~~~~~~  355 (740)
T 4a5s_A          329 DGNSFYKIISNEEGYRHICYFQIDKKD  355 (740)
T ss_dssp             TSSEEEEEEECTTSCEEEEEEETTCSS
T ss_pred             CCCEEEEEEEcCCCceEEEEEECCCCc
Confidence            998655 33   22  44555555443

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.77  E-value=3.5e-17  Score=157.38  Aligned_cols=234  Identities=12%  Similarity=0.102  Sum_probs=148.4

Q ss_pred             EEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEE-------------------EEEeeCCCCE
Q psy17682        170 DIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL-------------------VLWHPTAQNV  230 (490)
Q Consensus       170 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~p~~~~~  230 (490)
                      .+.|+|+| +.|+.++.++.|.+|++.+++.......       +......                   +.|+|+++ .
T Consensus        85 ~~~~spdg-~~l~~~~~~~~l~~~d~~~~~~~~~~~~-------~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~-~  155 (396)
T 3c5m_A           85 GGFISTDE-RAFFYVKNELNLMKVDLETLEEQVIYTV-------DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTS-W  155 (396)
T ss_dssp             TCEECTTS-SEEEEEETTTEEEEEETTTCCEEEEEEC-------CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS-H
T ss_pred             cceECCCC-CEEEEEEcCCcEEEEECCCCCcEEEEec-------ccccCCCCCEEEeccCCccccccccccccCCCCc-c
Confidence            36899988 7888888888999999887764332211       1111111                   34567764 3


Q ss_pred             EEEE-----eCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC-CCCEEEEEeCC------CeEEEEeCCCCceeeeeee
Q psy17682        231 LLTA-----GSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW-DGSKLLTTCKD------KKMRIINPRTGAIEEEAVC  298 (490)
Q Consensus       231 l~s~-----~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~  298 (490)
                      ++.+     ..+..|.+||+.+++..... .+...+..+.|+| +++.|+..+.+      ..|.+||+..++.......
T Consensus       156 ~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~  234 (396)
T 3c5m_A          156 EKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEH  234 (396)
T ss_dssp             HHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCC
T ss_pred             eeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeecc
Confidence            3332     35678999999988765544 4667789999999 78877776643      3689999876653332221


Q ss_pred             cCCCceeEEEEeCCCcEEEEEeCCC--ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecC-CCCeEEEEec-------
Q psy17682        299 HEGSKATRAIYLKSGLIFTTGFSKM--SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDP-DTNLVYLCGK-------  368 (490)
Q Consensus       299 ~~~~~~~~~~~s~~~~~l~~~~~~~--~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~g~-------  368 (490)
                      .....+..+.|+|+|+.|+..+.+.  ..+.|++||+.++... .+....   ... +.|+| ||++++++++       
T Consensus       235 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~---~~~-~~~s~~dg~~l~~~~~~~p~~~~  309 (396)
T 3c5m_A          235 AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENE-EVMVMP---PCS-HLMSNFDGSLMVGDGCDAPVDVA  309 (396)
T ss_dssp             CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEE-EEEECC---SEE-EEEECSSSSEEEEEECCC-----
T ss_pred             CCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeE-EeeeCC---CCC-CCccCCCCceEEEecCCcceeec
Confidence            1122377889999999776664211  1256999999876532 222211   233 89999 9998754331       


Q ss_pred             --------CCCeEEEEEecCCCCeeEEeeeeeCCC-----------ceeeEEEeeCceeEEeec---ceeEEEEec
Q psy17682        369 --------GDSVIRYFEITAEPPFVHYINTFQTPD-----------PQRGIGMMPKRGCDVNSC---EIGRFFRLN  422 (490)
Q Consensus       369 --------~dg~i~iwd~~~~~~~~~~~~~~~~~~-----------~i~~~~~sp~~~~l~~~~---~~~~~~~~~  422 (490)
                              .+..|++||+.+++.  ..+.  .+..           .+..++|+|||..++...   +...+|.+.
T Consensus       310 ~~~~~~~~~~~~i~~~d~~~~~~--~~l~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~  381 (396)
T 3c5m_A          310 DADSYNIENDPFLYVLNTKAKSA--QKLC--KHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD  381 (396)
T ss_dssp             -----CCCCCCEEEEEETTTTBC--CEEE--ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred             cccccccCCCCcEEEEecccCce--EEcc--CCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence                    347899999987752  1222  1211           256789999998766543   244566554

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.76  E-value=2.4e-16  Score=151.21  Aligned_cols=254  Identities=10%  Similarity=0.002  Sum_probs=166.3

Q ss_pred             eeecccCCeeE-----EEECCCCCCEEEEEeC-CCc--EEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEE
Q psy17682        160 LVGGHKGPVLD-----IAWSPHDDNVIASGSE-DCV--VKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVL  231 (490)
Q Consensus       160 ~~~~h~~~V~~-----~~~~p~~~~~l~s~~~-dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l  231 (490)
                      .+..|......     .+|+||| ++|+.++. ++.  |.+||+.+++.....       .++...+..+.|+|+++ .|
T Consensus        25 ~lt~~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~g~~~l~~~d~~~g~~~~lt-------~~~~~~~~~~~~spdg~-~l   95 (388)
T 3pe7_A           25 RLTPPDVTCHRNYFYQKCFTRDG-SKLLFGGAFDGPWNYYLLDLNTQVATQLT-------EGRGDNTFGGFLSPDDD-AL   95 (388)
T ss_dssp             ECSCTTSCEECCCTTSCCBCTTS-CEEEEEECTTSSCEEEEEETTTCEEEECC-------CSSCBCSSSCEECTTSS-EE
T ss_pred             EecCCcccccchhhcCccCCCCC-CEEEEEEcCCCCceEEEEeCCCCceEEee-------eCCCCCccceEEcCCCC-EE
Confidence            33445544444     7899999 66777666 674  888898877654322       22444455678999996 88


Q ss_pred             EEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEE--EcCCCCEEEEEe----------------------CCCeEEEEeC
Q psy17682        232 LTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSAS--WNWDGSKLLTTC----------------------KDKKMRIINP  287 (490)
Q Consensus       232 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~~----------------------~dg~i~iwd~  287 (490)
                      +.++.++.|++||+.+++....+..+...+....  ++|++++++...                      .+..|++||+
T Consensus        96 ~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~  175 (388)
T 3pe7_A           96 FYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDL  175 (388)
T ss_dssp             EEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEET
T ss_pred             EEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEEC
Confidence            8888889999999999987776665665554444  489999887532                      3467999999


Q ss_pred             CCCceeeeeeecCCCceeEEEEeC-CCcEEEEEeCCCc---eeEEEEecCCCCCCCeEEEeccCC--CceeeeeecCCCC
Q psy17682        288 RTGAIEEEAVCHEGSKATRAIYLK-SGLIFTTGFSKMS---ERQYSLRAPDHLDEPIVMVELDTS--NGVMFPLYDPDTN  361 (490)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~~~~~~~---~~~i~iwd~~~~~~~~~~~~~~~~--~~i~~~~~s~~~~  361 (490)
                      .+++..... .+.. .+..+.|+| +|+.|+.......   ...|.++|...... ..+.  .+.  ..+..+.|+|||+
T Consensus       176 ~~g~~~~l~-~~~~-~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~--~~~~~~~~~~~~~spdg~  250 (388)
T 3pe7_A          176 KTGESTVIL-QENQ-WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVK--THAEGESCTHEFWVPDGS  250 (388)
T ss_dssp             TTCCEEEEE-EESS-CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESC--CCCTTEEEEEEEECTTSS
T ss_pred             CCCceEEee-cCCc-cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEee--eCCCCcccccceECCCCC
Confidence            988754443 3333 388999999 9998887764211   34688888765432 2221  222  2477889999999


Q ss_pred             eEEEEecCCC----eEEEEEecCCCCeeEEeeeeeCC----CceeeEEEeeCceeEEee-----------cceeEEEEec
Q psy17682        362 LVYLCGKGDS----VIRYFEITAEPPFVHYINTFQTP----DPQRGIGMMPKRGCDVNS-----------CEIGRFFRLN  422 (490)
Q Consensus       362 ~l~~~g~~dg----~i~iwd~~~~~~~~~~~~~~~~~----~~i~~~~~sp~~~~l~~~-----------~~~~~~~~~~  422 (490)
                      .|++++..++    .|++||+.+++.  +.+..+...    .....++|+|||+.++..           ...+.+|++.
T Consensus       251 ~l~~~~~~~~~~~~~l~~~d~~~g~~--~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~  328 (388)
T 3pe7_A          251 ALVYVSYLKGSPDRFIYSADPETLEN--RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK  328 (388)
T ss_dssp             CEEEEEEETTCCCEEEEEECTTTCCE--EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT
T ss_pred             EEEEEecCCCCCcceEEEEecCCCce--EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc
Confidence            8855443322    399999998862  222222210    012345899999877732           3366778877


Q ss_pred             CCCceEEE
Q psy17682        423 NSGLCQVV  430 (490)
Q Consensus       423 ~~~~~~~i  430 (490)
                      ++. +..+
T Consensus       329 ~~~-~~~l  335 (388)
T 3pe7_A          329 NGT-QHRV  335 (388)
T ss_dssp             TTE-EEEE
T ss_pred             CCc-eEEe
Confidence            765 4443

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.76  E-value=1.8e-15  Score=138.59  Aligned_cols=251  Identities=8%  Similarity=0.041  Sum_probs=175.2

Q ss_pred             ccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecc
Q psy17682         41 LYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISE  120 (490)
Q Consensus        41 ~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  120 (490)
                      .+|-..+.+++++|++ .++++...++.|.+||... .                  ....                    
T Consensus        26 ~g~~~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~g-~------------------~~~~--------------------   65 (286)
T 1q7f_A           26 EGQFTEPSGVAVNAQN-DIIVADTNNHRIQIFDKEG-R------------------FKFQ--------------------   65 (286)
T ss_dssp             TTCBSCEEEEEECTTC-CEEEEEGGGTEEEEECTTS-C------------------EEEE--------------------
T ss_pred             CCccCCCceEEECCCC-CEEEEECCCCEEEEECCCC-c------------------EEEE--------------------
Confidence            4677889999999998 7888888889999998763 2                  0000                    


Q ss_pred             ccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEE-CCCCCCEEEEEeC-CCcEEEEECCCC
Q psy17682        121 DYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAW-SPHDDNVIASGSE-DCVVKVWQIPDG  198 (490)
Q Consensus       121 ~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~-~p~~~~~l~s~~~-dg~i~iwd~~~~  198 (490)
                                           +..      .+       ...+|...+.++++ .+++ .++++... ++.|.+|+ .++
T Consensus        66 ---------------------~~~------~~-------~~~~~~~~p~~i~~~~~~g-~l~v~~~~~~~~i~~~d-~~g  109 (286)
T 1q7f_A           66 ---------------------FGE------CG-------KRDSQLLYPNRVAVVRNSG-DIIVTERSPTHQIQIYN-QYG  109 (286)
T ss_dssp             ---------------------ECC------BS-------SSTTCBSSEEEEEEETTTT-EEEEEECGGGCEEEEEC-TTS
T ss_pred             ---------------------ecc------cC-------CCcccccCceEEEEEcCCC-eEEEEcCCCCCEEEEEC-CCC
Confidence                                 000      00       00135567889999 4655 56666543 78999999 566


Q ss_pred             CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe--cCCCcEEEEEEcCCCCEEEEE
Q psy17682        199 GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE--CHPDIVYSASWNWDGSKLLTT  276 (490)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~  276 (490)
                      +.+..+..      .+...+.+++++|++. ++++...++.|.+||. +++.+..+.  .+...+..++++++|+++++.
T Consensus       110 ~~~~~~~~------~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~  181 (286)
T 1q7f_A          110 QFVRKFGA------TILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISD  181 (286)
T ss_dssp             CEEEEECT------TTCSCEEEEEECTTSC-EEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred             cEEEEecC------ccCCCceEEEEeCCCC-EEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence            55443321      2445689999999985 7887777899999996 466666664  345578999999999988887


Q ss_pred             eCCCeEEEEeCCCCceeeeeeecC-CCceeEEEEeCCCcEEEEEeCCCcee-EEEEecCCCCCCCeEEEeccCCCceeee
Q psy17682        277 CKDKKMRIINPRTGAIEEEAVCHE-GSKATRAIYLKSGLIFTTGFSKMSER-QYSLRAPDHLDEPIVMVELDTSNGVMFP  354 (490)
Q Consensus       277 ~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~~~~~~~~~-~i~iwd~~~~~~~~~~~~~~~~~~i~~~  354 (490)
                      ..++.|++||.. ++.+..+..+. ...+..++++++|+++++..   .++ .|.+||... +....+........+..+
T Consensus       182 ~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~---~~~~~i~~~~~~g-~~~~~~~~~~~~~~~~~i  256 (286)
T 1q7f_A          182 NRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADN---HNNFNLTIFTQDG-QLISALESKVKHAQCFDV  256 (286)
T ss_dssp             GGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEEC---SSSCEEEEECTTS-CEEEEEEESSCCSCEEEE
T ss_pred             CCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeC---CCCEEEEEECCCC-CEEEEEcccCCCCcceeE
Confidence            888999999974 55555554332 13488999999999888876   354 899999653 322222222222347789


Q ss_pred             eecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        355 LYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       355 ~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      +++|+|+.+ ++ +.|+.|++|++....
T Consensus       257 ~~~~~g~l~-vs-~~~~~v~v~~~~~~~  282 (286)
T 1q7f_A          257 ALMDDGSVV-LA-SKDYRLYIYRYVQLA  282 (286)
T ss_dssp             EEETTTEEE-EE-ETTTEEEEEECSCCC
T ss_pred             EECCCCcEE-EE-CCCCeEEEEEccccc
Confidence            999999755 66 468999999987654

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.75  E-value=8.5e-16  Score=143.86  Aligned_cols=245  Identities=9%  Similarity=-0.002  Sum_probs=172.8

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCC------------------------CcEEEEECCCCCcccccccceeeecccccCEEE
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSED------------------------CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL  220 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~d------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~  220 (490)
                      -+.+.+++++|+| +++++...+                        ++|.+||..+++....+.      .++-.....
T Consensus        23 l~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~------~~~~~~p~g   95 (329)
T 3fvz_A           23 PGQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG------KNLFYLPHG   95 (329)
T ss_dssp             CSCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC------TTTCSSEEE
T ss_pred             cCCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC------CCccCCceE
Confidence            4679999999998 788887777                        479999988887654322      124457899


Q ss_pred             EEEeeCCCCEEEEEeCCCcEEEEECCCCe-eEEEEe---------cCCCcEEEEEEcC-CCCEEEEEe-CCCeEEEEeCC
Q psy17682        221 VLWHPTAQNVLLTAGSDNNVAIWNVGTGE-IMIQIE---------CHPDIVYSASWNW-DGSKLLTTC-KDKKMRIINPR  288 (490)
Q Consensus       221 ~~~~p~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~---------~~~~~v~~~~~~~-~~~~l~~~~-~dg~i~iwd~~  288 (490)
                      ++++|++. ++++...++.|++||..... .+..+.         .+......++++| +++++++.+ .++.|++|| .
T Consensus        96 ia~d~~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~  173 (329)
T 3fvz_A           96 LSIDTDGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-P  173 (329)
T ss_dssp             EEECTTSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-T
T ss_pred             EEECCCCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-C
Confidence            99999995 88888888999999986442 455552         3445689999999 788888876 689999999 5


Q ss_pred             CCceeeeeeecCC---------CceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecC
Q psy17682        289 TGAIEEEAVCHEG---------SKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDP  358 (490)
Q Consensus       289 ~~~~~~~~~~~~~---------~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~  358 (490)
                      +++.+..+.....         ..+..++++|+ +.++++..   .++.|++|+..+++....+........+..++|+|
T Consensus       174 ~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~---~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p  250 (329)
T 3fvz_A          174 SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR---ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP  250 (329)
T ss_dssp             TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET---TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET
T ss_pred             CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC---CCCEEEEEECCCCcEEEEEeccccCCCcceeeecC
Confidence            6776666542211         12789999998 77777766   57899999998655333332223445678889999


Q ss_pred             ------CCCeEEEEecCCCeEEEEEecCCCCeeEEeee-eeCCCceeeEEEeeCceeEEeecc--eeEEEEecC
Q psy17682        359 ------DTNLVYLCGKGDSVIRYFEITAEPPFVHYINT-FQTPDPQRGIGMMPKRGCDVNSCE--IGRFFRLNN  423 (490)
Q Consensus       359 ------~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~~~~  423 (490)
                            +|+.. ++...+..|++|+..+++ +...+.. ..+.....+++++|+|.++++...  .+++|++..
T Consensus       251 g~~~~~~g~~~-v~~~~~~~v~~~~~~~g~-~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          251 GFLFAVNGKPY-FGDQEPVQGFVMNFSSGE-IIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             TEEEEEECCCC-TTCSCCCCEEEEETTTCC-EEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred             CEEEEeCCCEE-eccCCCcEEEEEEcCCCe-EEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence                  33322 333445689999999887 2222211 123346899999999988777744  455555543

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.75  E-value=4.2e-16  Score=160.58  Aligned_cols=238  Identities=9%  Similarity=-0.010  Sum_probs=144.5

Q ss_pred             CCCCCCEEEEE-eCCCcEEEEECC--C-CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC----------Cc
Q psy17682        174 SPHDDNVIASG-SEDCVVKVWQIP--D-GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD----------NN  239 (490)
Q Consensus       174 ~p~~~~~l~s~-~~dg~i~iwd~~--~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d----------g~  239 (490)
                      ||||+.+|+.+ ..+..|.++++.  . ++ ...+...  ....|...+.+++|+|+|+ .|+.++.+          ..
T Consensus        87 SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~--~~~~~~~~~~~~~~spDg~-~l~~~~~~~~~~~~~~~~~~  162 (662)
T 3azo_A           87 RPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPV--SAVGGGLRWADPVLLPERG-EVWCMAEEFTGEGPSDVRRF  162 (662)
T ss_dssp             CSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCC--CCSTTCEEEEEEEEETTTT-EEEEEEEEECSSSTTCEEEE
T ss_pred             ecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCC--ccCCCCccccCcEECCCCC-EEEEEEecccCCCCCCceeE
Confidence            49985414444 345667777765  2 33 2222210  0001566789999999996 77777766          58


Q ss_pred             EEEEECCC------CeeEEEEe-cCCCcEEEEEEcCCCCEEEEEeCC--------CeEEEEeCC-CCc--eeeeee-ecC
Q psy17682        240 VAIWNVGT------GEIMIQIE-CHPDIVYSASWNWDGSKLLTTCKD--------KKMRIINPR-TGA--IEEEAV-CHE  300 (490)
Q Consensus       240 v~iwd~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~-~~~--~~~~~~-~~~  300 (490)
                      |++||+.+      ++. ..+. .+...+..++|+|||++|+.++.+        ..|++||+. +++  ....+. .+.
T Consensus       163 i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~  241 (662)
T 3azo_A          163 LAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE  241 (662)
T ss_dssp             EEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT
T ss_pred             EEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC
Confidence            99999987      554 4454 566778889999999999988755        379999998 562  333333 333


Q ss_pred             CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCc---------eeeeeecCCCCeEEEEecCCC
Q psy17682        301 GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNG---------VMFPLYDPDTNLVYLCGKGDS  371 (490)
Q Consensus       301 ~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~---------i~~~~~s~~~~~l~~~g~~dg  371 (490)
                      . .+..+.|+|||++++++..+ ....|.+||+.+++.   .....+...         +..++|+|+++++ ++++. +
T Consensus       242 ~-~~~~~~~spdg~l~~~~~~~-~~~~l~~~~~~~~~~---~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~-~~~~~-~  314 (662)
T 3azo_A          242 E-AIAQAEWAPDGSLIVATDRT-GWWNLHRVDPATGAA---TQLCRREEEFAGPLWTPGMRWFAPLANGLIA-VVHGK-G  314 (662)
T ss_dssp             B-CEEEEEECTTSCEEEEECTT-SSCEEEEECTTTCCE---EESSCCSSBSSCCCCSTTCCSEEECTTSCEE-EEEBS-S
T ss_pred             c-eEcceEECCCCeEEEEECCC-CCeEEEEEECCCCce---eecccccccccCccccccCceEeEeCCCEEE-EEEEc-C
Confidence            3 48899999999977666532 123788888755431   111111111         4578888999877 66777 9


Q ss_pred             eEEEEEecCCCCeeEEeeeeeCCCceeeE-EEeeCceeEEeec--ceeEEEEec--CCC
Q psy17682        372 VIRYFEITAEPPFVHYINTFQTPDPQRGI-GMMPKRGCDVNSC--EIGRFFRLN--NSG  425 (490)
Q Consensus       372 ~i~iwd~~~~~~~~~~~~~~~~~~~i~~~-~~sp~~~~l~~~~--~~~~~~~~~--~~~  425 (490)
                      .++||.+.......+.+.  .+...+..+ +++++..++++++  ....+|.++  +++
T Consensus       315 ~~~l~~~d~~~~~~~~l~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~  371 (662)
T 3azo_A          315 AAVLGILDPESGELVDAA--GPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR  371 (662)
T ss_dssp             SCEEEEEETTTTEEEECC--SSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred             ccEEEEEECCCCcEEEec--CCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            999996653211122332  223456666 4444444444433  234566554  554

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.75  E-value=4.1e-15  Score=136.27  Aligned_cols=249  Identities=10%  Similarity=0.094  Sum_probs=171.5

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEe-eCCCCEEEEEeC-CCcE
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWH-PTAQNVLLTAGS-DNNV  240 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~l~s~~~-dg~v  240 (490)
                      +|-..+.+++++|++ +++++...++.|.+||.. ++....+.... ...++...+.++++. +++ +++++... ++.|
T Consensus        27 g~~~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~-~~~~~~~~p~~i~~~~~~g-~l~v~~~~~~~~i  102 (286)
T 1q7f_A           27 GQFTEPSGVAVNAQN-DIIVADTNNHRIQIFDKE-GRFKFQFGECG-KRDSQLLYPNRVAVVRNSG-DIIVTERSPTHQI  102 (286)
T ss_dssp             TCBSCEEEEEECTTC-CEEEEEGGGTEEEEECTT-SCEEEEECCBS-SSTTCBSSEEEEEEETTTT-EEEEEECGGGCEE
T ss_pred             CccCCCceEEECCCC-CEEEEECCCCEEEEECCC-CcEEEEecccC-CCcccccCceEEEEEcCCC-eEEEEcCCCCCEE
Confidence            566789999999988 788888889999999976 54444332100 012344678999995 565 35555533 7899


Q ss_pred             EEEECCCCeeEEEEe-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeee-cCCCceeEEEEeCCCcEEEE
Q psy17682        241 AIWNVGTGEIMIQIE-CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVC-HEGSKATRAIYLKSGLIFTT  318 (490)
Q Consensus       241 ~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~  318 (490)
                      .+|| .+++.+..+. .+...+.+++++|+|+++++...++.|++||.. ++.+..+.. .....+..++++++|+++++
T Consensus       103 ~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~  180 (286)
T 1q7f_A          103 QIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFIS  180 (286)
T ss_dssp             EEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEE
T ss_pred             EEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEE
Confidence            9999 5677776664 334578999999999988887788999999964 555555542 12224889999999998887


Q ss_pred             EeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC-eEEEEEecCCCCeeEEeeeeeCCCce
Q psy17682        319 GFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS-VIRYFEITAEPPFVHYINTFQTPDPQ  397 (490)
Q Consensus       319 ~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~i  397 (490)
                      ..   .++.|++||... .....+....+...+..++++++|+++ ++...++ .|.+|+.. ++ ....+........+
T Consensus       181 ~~---~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~~G~l~-v~~~~~~~~i~~~~~~-g~-~~~~~~~~~~~~~~  253 (286)
T 1q7f_A          181 DN---RAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEIL-IADNHNNFNLTIFTQD-GQ-LISALESKVKHAQC  253 (286)
T ss_dssp             EG---GGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEE-EEECSSSCEEEEECTT-SC-EEEEEEESSCCSCE
T ss_pred             EC---CCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECCCCCEE-EEeCCCCEEEEEECCC-CC-EEEEEcccCCCCcc
Confidence            76   578999999753 211111111112467899999999766 6666665 99999954 44 23333222222347


Q ss_pred             eeEEEeeCceeEEee-cceeEEEEecCC
Q psy17682        398 RGIGMMPKRGCDVNS-CEIGRFFRLNNS  424 (490)
Q Consensus       398 ~~~~~sp~~~~l~~~-~~~~~~~~~~~~  424 (490)
                      .+++++|+|.++++. +..+++|++...
T Consensus       254 ~~i~~~~~g~l~vs~~~~~v~v~~~~~~  281 (286)
T 1q7f_A          254 FDVALMDDGSVVLASKDYRLYIYRYVQL  281 (286)
T ss_dssp             EEEEEETTTEEEEEETTTEEEEEECSCC
T ss_pred             eeEEECCCCcEEEECCCCeEEEEEcccc
Confidence            799999999887775 447788887654

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.73  E-value=1.9e-15  Score=143.15  Aligned_cols=221  Identities=10%  Similarity=0.062  Sum_probs=147.7

Q ss_pred             CCeeEEEECCCCCCEEEEEeC--CCcEEEEECCCCCcccc-cccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEE
Q psy17682        166 GPVLDIAWSPHDDNVIASGSE--DCVVKVWQIPDGGISRT-LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAI  242 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~i  242 (490)
                      .....++++|+| ++|+++..  +++|.+||+.+++.+.. +.        . .....+.+.|++...+++.+.||.+.+
T Consensus       108 ~~p~~i~~spdg-~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~--------~-~~~~~v~~~p~~~~~~~~~~~dg~~~~  177 (361)
T 2oiz_A          108 NYDGLFRQTTDG-KFIVLQNASPATSIGIVDVAKGDYVEDVTA--------A-AGCWSVIPQPNRPRSFMTICGDGGLLT  177 (361)
T ss_dssp             CCGGGEEECTTS-SEEEEEEESSSEEEEEEETTTTEEEEEEGG--------G-TTEEEEEECTTSSSEEEEEETTSSEEE
T ss_pred             CCcceEEECCCC-CEEEEECCCCCCeEEEEECCCCcEEEEEec--------C-CCcceeEEcCCCCeeEEEECCCCcEEE
Confidence            456678999999 67777653  68999999998876554 33        1 122346678887668889999999999


Q ss_pred             EECCC-CeeEEEE------ecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee--eeeee------cCCC---ce
Q psy17682        243 WNVGT-GEIMIQI------ECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIE--EEAVC------HEGS---KA  304 (490)
Q Consensus       243 wd~~~-~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~------~~~~---~~  304 (490)
                      |++.. ++.....      .....++ .+.+++++..++..+.++.+.++|+......  ..+..      +...   ..
T Consensus       178 v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~  256 (361)
T 2oiz_A          178 INLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGY  256 (361)
T ss_dssp             EEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCS
T ss_pred             EEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCe
Confidence            99865 5544221      1122222 3344677777888888999999999765422  22110      0010   02


Q ss_pred             eEEEEeCCCcEEEEEeC-CC-------ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEE
Q psy17682        305 TRAIYLKSGLIFTTGFS-KM-------SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYF  376 (490)
Q Consensus       305 ~~~~~s~~~~~l~~~~~-~~-------~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iw  376 (490)
                      ..++++|++..+.++.. ++       ....|.+||+.+.+.   +..+.... ...++|+|||++|++++ . +.|.+|
T Consensus       257 ~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~---v~~i~~~~-p~~ia~spdg~~l~v~n-~-~~v~v~  330 (361)
T 2oiz_A          257 NLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR---VARIPGRD-ALSMTIDQQRNLMLTLD-G-GNVNVY  330 (361)
T ss_dssp             SCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE---EEEEECTT-CCEEEEETTTTEEEEEC-S-SCEEEE
T ss_pred             eEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcE---EEEEecCC-eeEEEECCCCCEEEEeC-C-CeEEEE
Confidence            23789999776665532 11       135899999988653   33333334 89999999999996554 4 999999


Q ss_pred             EecCC--CCeeEEeeee-eCCCceeeEEEeeCce
Q psy17682        377 EITAE--PPFVHYINTF-QTPDPQRGIGMMPKRG  407 (490)
Q Consensus       377 d~~~~--~~~~~~~~~~-~~~~~i~~~~~sp~~~  407 (490)
                      |..++  +    .+..+ ..+.....++++|+|.
T Consensus       331 D~~t~~l~----~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          331 DISQPEPK----LLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             ECSSSSCE----EEEEETTSCSSEEEEEECCCSC
T ss_pred             ECCCCcce----eeEEeccCCCCcEEEEecCCCC
Confidence            99998  5    44443 4456778999999985

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.73  E-value=4.6e-15  Score=139.11  Aligned_cols=232  Identities=10%  Similarity=0.048  Sum_probs=157.4

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC--
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD--  237 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d--  237 (490)
                      .+.++...+.+++|+|+| ++++++..++.|.+||..+++.....       ..+...+.+++++|++. ++++...+  
T Consensus        39 ~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~~~~~~-------~~~~~~~~~i~~~~dg~-l~v~~~~~~~  109 (333)
T 2dg1_A           39 EISKKGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKEIKRPF-------VSHKANPAAIKIHKDGR-LFVCYLGDFK  109 (333)
T ss_dssp             EEESSCCCEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEE-------ECSSSSEEEEEECTTSC-EEEEECTTSS
T ss_pred             EEeccCccccCcEECCCC-CEEEEECCCCEEEEEeCCCCcEEEEe-------eCCCCCcceEEECCCCc-EEEEeCCCCC
Confidence            344566678999999988 67888888999999998877643321       12557799999999985 77776655  


Q ss_pred             --CcEEEEECCCCeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeC------CCeEEEEeCCCCceeeeeeecCCCceeEE
Q psy17682        238 --NNVAIWNVGTGEIMIQIE--CHPDIVYSASWNWDGSKLLTTCK------DKKMRIINPRTGAIEEEAVCHEGSKATRA  307 (490)
Q Consensus       238 --g~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  307 (490)
                        +.|.+||..+++....+.  .+...+.+++++|+|+++++...      .+.|..+|..+++...... ... .+..+
T Consensus       110 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~-~~~~i  187 (333)
T 2dg1_A          110 STGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-NIS-VANGI  187 (333)
T ss_dssp             SCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE-EES-SEEEE
T ss_pred             CCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec-CCC-cccce
Confidence              689999998776543333  24457899999999987776654      3667888876655433222 222 37889


Q ss_pred             EEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeE-E-----EeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        308 IYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIV-M-----VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       308 ~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~-~-----~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      +|+|+|+.+..+..  .++.|.+||......... .     ........+..++++++|+++ ++...++.|.+||.. +
T Consensus       188 ~~~~dg~~l~v~~~--~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~-v~~~~~~~v~~~d~~-g  263 (333)
T 2dg1_A          188 ALSTDEKVLWVTET--TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLY-VAMYGQGRVLVFNKR-G  263 (333)
T ss_dssp             EECTTSSEEEEEEG--GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEE-EEEETTTEEEEECTT-S
T ss_pred             EECCCCCEEEEEeC--CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEE-EEEcCCCEEEEECCC-C
Confidence            99999985544431  467899999864222111 1     111112357789999999866 666667899999984 4


Q ss_pred             CCeeEEeeeeeCCC-------ceeeEEEeeCceeEE
Q psy17682        382 PPFVHYINTFQTPD-------PQRGIGMMPKRGCDV  410 (490)
Q Consensus       382 ~~~~~~~~~~~~~~-------~i~~~~~sp~~~~l~  410 (490)
                      + .   +..+..+.       .+.+++|+||+..++
T Consensus       264 ~-~---~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~  295 (333)
T 2dg1_A          264 Y-P---IGQILIPGRDEGHMLRSTHPQFIPGTNQLI  295 (333)
T ss_dssp             C-E---EEEEECTTGGGTCSCBCCEEEECTTSCEEE
T ss_pred             C-E---EEEEEcCCCccccccCcceEEECCCCCEEE
Confidence            4 2   22222221       578999999975444

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.71  E-value=8.6e-15  Score=136.98  Aligned_cols=214  Identities=12%  Similarity=0.031  Sum_probs=150.3

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC-ccccccccee--eecccccCEEEEEEee-CCCCEEEEEe-CC
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG-ISRTLTEPVV--DLLYHQRRVGLVLWHP-TAQNVLLTAG-SD  237 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~--~~~~~~~~v~~~~~~p-~~~~~l~s~~-~d  237 (490)
                      ++-....+++++|+| +++++...++.|++|+..... .+..+.....  .-.++-....+++++| ++ +++++.+ .+
T Consensus        88 ~~~~~p~gia~d~~g-~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g-~lyv~d~~~~  165 (329)
T 3fvz_A           88 NLFYLPHGLSIDTDG-NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTG-AVFVSDGYCN  165 (329)
T ss_dssp             TTCSSEEEEEECTTS-CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTC-CEEEEECSSC
T ss_pred             CccCCceEEEECCCC-CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCC-eEEEEeCCCC
Confidence            445678999999988 688888889999999975432 3333211000  0023445789999999 66 4777776 68


Q ss_pred             CcEEEEECCCCeeEEEEecCC----------CcEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeeeeec-CCCcee
Q psy17682        238 NNVAIWNVGTGEIMIQIECHP----------DIVYSASWNWD-GSKLLTTCKDKKMRIINPRTGAIEEEAVCH-EGSKAT  305 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~----------~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~  305 (490)
                      +.|++|+ .+++.+..+....          .....++++|+ ++++++...++.|++||..+++.+..+... .+..+.
T Consensus       166 ~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~  244 (329)
T 3fvz_A          166 SRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVF  244 (329)
T ss_dssp             CEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEE
T ss_pred             CeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcc
Confidence            9999999 5677777664222          33889999998 777777778899999999988888777522 223478


Q ss_pred             EEEEeCCCcEEEEEeC----CCceeEEEEecCCCCCCCeEEEe-ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        306 RAIYLKSGLIFTTGFS----KMSERQYSLRAPDHLDEPIVMVE-LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       306 ~~~~s~~~~~l~~~~~----~~~~~~i~iwd~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      .++++| +..+++.+.    +.....+++|+..+++....+.. ..+......++++|+| .|+++...++.|++|++..
T Consensus       245 ~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          245 AISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             EEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSSCCEEEEEEEE
T ss_pred             eeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCCCEEEEEeCCc
Confidence            899999 555444321    11345899999887653222210 1344568899999999 6668888999999999875


Q ss_pred             C
Q psy17682        381 E  381 (490)
Q Consensus       381 ~  381 (490)
                      .
T Consensus       323 ~  323 (329)
T 3fvz_A          323 K  323 (329)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.69  E-value=5.3e-15  Score=140.08  Aligned_cols=267  Identities=10%  Similarity=0.062  Sum_probs=175.7

Q ss_pred             CCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe----------CCCcEEEEECCCCCccccc
Q psy17682        135 SQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS----------EDCVVKVWQIPDGGISRTL  204 (490)
Q Consensus       135 ~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~  204 (490)
                      .++.+.+|+..     +++   ....+..+..+  .++|+|+| ++++++.          .++.|.+||..+++.+..+
T Consensus        29 ~d~~v~v~D~~-----t~~---~~~~i~~g~~p--~i~~spdg-~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i   97 (361)
T 2oiz_A           29 TESRVHVYDYT-----NGK---FLGMVPTAFNG--HVQVSNDG-KKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEI   97 (361)
T ss_dssp             GGCEEEEEETT-----TCC---EEEEEECCEEE--EEEECTTS-SEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEE
T ss_pred             ccCeEEEEECC-----CCe---EEEEecCCCCC--ceEECCCC-CEEEEEEecccccccCCCCCEEEEEECcCCcEEEEE
Confidence            46789999874     232   23345555555  89999998 6777765          3678999999888776654


Q ss_pred             ccceeeecccccCEEEEEEeeCCCCEEEEEeC--CCcEEEEECCCCeeEEE-EecCCCcEEEEEEcCCC-CEEEEEeCCC
Q psy17682        205 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS--DNNVAIWNVGTGEIMIQ-IECHPDIVYSASWNWDG-SKLLTTCKDK  280 (490)
Q Consensus       205 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~dg  280 (490)
                      ..+.... .+......++++|+|+ +|+++..  ++.|.+||+.+++.+.. +.. . ....+.+.|++ ..+++.+.||
T Consensus        98 ~~~~~~~-~~g~~p~~i~~spdg~-~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~~~dg  173 (361)
T 2oiz_A           98 SLPPKRV-QGLNYDGLFRQTTDGK-FIVLQNASPATSIGIVDVAKGDYVEDVTAA-A-GCWSVIPQPNRPRSFMTICGDG  173 (361)
T ss_dssp             EECTTBC-CBCCCGGGEEECTTSS-EEEEEEESSSEEEEEEETTTTEEEEEEGGG-T-TEEEEEECTTSSSEEEEEETTS
T ss_pred             EcCcccc-ccCCCcceEEECCCCC-EEEEECCCCCCeEEEEECCCCcEEEEEecC-C-CcceeEEcCCCCeeEEEECCCC
Confidence            3210000 0234567899999996 6666653  68999999999998887 552 2 23346677866 6788889999


Q ss_pred             eEEEEeCCC-Cceeeeee----ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc--------C
Q psy17682        281 KMRIINPRT-GAIEEEAV----CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD--------T  347 (490)
Q Consensus       281 ~i~iwd~~~-~~~~~~~~----~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~--------~  347 (490)
                      .+.+|++.. ++......    .+.......+.+++++..++..+   .++.+.++|+...... ......        .
T Consensus       174 ~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~v~v~d~~~~~~~-~~~~~~~~~~~~~~~  249 (361)
T 2oiz_A          174 GLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVS---YYGNVYSADFSGDEVK-VDGPWSLLNDEDKAK  249 (361)
T ss_dssp             SEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEB---TTSEEEEEECSSSSCE-EEEEEESCCHHHHHT
T ss_pred             cEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEe---CCCeEEEEEecCCCce-ecccccccCcccccc
Confidence            999999865 44432211    01111122333466666665555   4678999998754321 111100        0


Q ss_pred             ---CCceeeeeecCCCCeEEEEec----------CCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec-
Q psy17682        348 ---SNGVMFPLYDPDTNLVYLCGK----------GDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC-  413 (490)
Q Consensus       348 ---~~~i~~~~~s~~~~~l~~~g~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-  413 (490)
                         ..+...++|+|+++.+|++..          ..+.|.+||+.+.+    .+..+..+. ..+++|+|||+++++++ 
T Consensus       250 ~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~----~v~~i~~~~-p~~ia~spdg~~l~v~n~  324 (361)
T 2oiz_A          250 NWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ----RVARIPGRD-ALSMTIDQQRNLMLTLDG  324 (361)
T ss_dssp             TCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE----EEEEEECTT-CCEEEEETTTTEEEEECS
T ss_pred             ccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc----EEEEEecCC-eeEEEECCCCCEEEEeCC
Confidence               112234789999999987654          13589999999986    444455555 99999999998877664 


Q ss_pred             ceeEEEEecCCC
Q psy17682        414 EIGRFFRLNNSG  425 (490)
Q Consensus       414 ~~~~~~~~~~~~  425 (490)
                      +.+.+|++.++.
T Consensus       325 ~~v~v~D~~t~~  336 (361)
T 2oiz_A          325 GNVNVYDISQPE  336 (361)
T ss_dssp             SCEEEEECSSSS
T ss_pred             CeEEEEECCCCc
Confidence            578889888873

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.69  E-value=9.8e-15  Score=136.45  Aligned_cols=273  Identities=9%  Similarity=-0.006  Sum_probs=179.3

Q ss_pred             CCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECC
Q psy17682         65 KEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPP  144 (490)
Q Consensus        65 ~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~  144 (490)
                      .+++|.++|..+++....              +......   .........+.+..+.      +.++...++.+.+++.
T Consensus        15 ~~~~l~~~d~~t~~~~~~--------------i~~~~n~---~~lg~~~~~i~~~~~~------lyv~~~~~~~v~viD~   71 (328)
T 3dsm_A           15 SNATLSYYDPATCEVENE--------------VFYRANG---FKLGDVAQSMVIRDGI------GWIVVNNSHVIFAIDI   71 (328)
T ss_dssp             CCBEEEEEETTTTEEECS--------------HHHHHHS---SCCBSCEEEEEEETTE------EEEEEGGGTEEEEEET
T ss_pred             CCceEEEEECCCCEEhhh--------------hHhhhcC---cccCccceEEEEECCE------EEEEEcCCCEEEEEEC
Confidence            389999999998763221              0000000   0001123445554432      3444556789999988


Q ss_pred             CCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEe
Q psy17682        145 PSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWH  224 (490)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  224 (490)
                      .     +++   .+..+. .......+++++++ .++++...++.|.+||..+++....+....  ..+.......+++ 
T Consensus        72 ~-----t~~---~~~~i~-~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~--~~~~~~~p~~i~~-  138 (328)
T 3dsm_A           72 N-----TFK---EVGRIT-GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPD--MDMESGSTEQMVQ-  138 (328)
T ss_dssp             T-----TCC---EEEEEE-CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTT--CCTTTCBCCCEEE-
T ss_pred             c-----ccE---EEEEcC-CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCC--ccccCCCcceEEE-
Confidence            4     222   223333 34678899998877 555555578999999998887655443210  0011114456667 


Q ss_pred             eCCCCEEEEEe-CCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC----------CeEEEEeCCCCcee
Q psy17682        225 PTAQNVLLTAG-SDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD----------KKMRIINPRTGAIE  293 (490)
Q Consensus       225 p~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~~~~~  293 (490)
                      .++ .++++.. .++.|.++|+.+++.+..+.. ......++++|+|++++++..+          +.|.++|..+++..
T Consensus       139 ~~~-~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~  216 (328)
T 3dsm_A          139 YGK-YVYVNCWSYQNRILKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVE  216 (328)
T ss_dssp             ETT-EEEEEECTTCCEEEEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE
T ss_pred             ECC-EEEEEcCCCCCEEEEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEE
Confidence            343 3445443 488999999999998888774 3445789999999877776654          78999999999887


Q ss_pred             eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc-CCCceeeeeecCCCCeEEEEe----c
Q psy17682        294 EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD-TSNGVMFPLYDPDTNLVYLCG----K  368 (490)
Q Consensus       294 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~g----~  368 (490)
                      ..+....+..+..++++|+++.+.++.   .  .|.+||..+.+.... .... .......++++|++..|+++.    .
T Consensus       217 ~~~~~~~g~~p~~la~~~d~~~lyv~~---~--~v~~~d~~t~~~~~~-~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~  290 (328)
T 3dsm_A          217 KQFKFKLGDWPSEVQLNGTRDTLYWIN---N--DIWRMPVEADRVPVR-PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQ  290 (328)
T ss_dssp             EEEECCTTCCCEEEEECTTSCEEEEES---S--SEEEEETTCSSCCSS-CSBCCCSSCEEEEEECTTTCCEEEEECTTSS
T ss_pred             EEEecCCCCCceeEEEecCCCEEEEEc---c--EEEEEECCCCceeee-eeecCCCCceEEEEEcCCCCeEEEEcccccc
Confidence            777644333589999999998888774   2  788999987653211 1111 134578899999777777887    6


Q ss_pred             CCCeEEEEEecCCC
Q psy17682        369 GDSVIRYFEITAEP  382 (490)
Q Consensus       369 ~dg~i~iwd~~~~~  382 (490)
                      .++.|.+||.. ++
T Consensus       291 ~~~~V~v~d~~-g~  303 (328)
T 3dsm_A          291 QQGIVYRYSPQ-GK  303 (328)
T ss_dssp             SEEEEEEECTT-CC
T ss_pred             cCCEEEEECCC-CC
Confidence            78999999998 66

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.67  E-value=3.6e-14  Score=130.64  Aligned_cols=241  Identities=10%  Similarity=0.035  Sum_probs=163.5

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      ...+..+.....+++|+|++..+++++..++.|..|+..++  ...+       ..+...+.+++++|++. ++++...+
T Consensus        20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~-------~~~~~~~~~l~~~~dg~-l~v~~~~~   89 (296)
T 3e5z_A           20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPE-------MHPSHHQNGHCLNKQGH-LIACSHGL   89 (296)
T ss_dssp             CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEE-------ESSCSSEEEEEECTTCC-EEEEETTT
T ss_pred             EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEE-------ECCCCCcceeeECCCCc-EEEEecCC
Confidence            34555667788999999998448888889999999998766  3332       23567789999999995 77766667


Q ss_pred             CcEEEEECCCCeeEEEEecC----CCcEEEEEEcCCCCEEEEE----e-------------CCCeEEEEeCCCCceeeee
Q psy17682        238 NNVAIWNVGTGEIMIQIECH----PDIVYSASWNWDGSKLLTT----C-------------KDKKMRIINPRTGAIEEEA  296 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~----~-------------~dg~i~iwd~~~~~~~~~~  296 (490)
                      +.|.+||..+++........    ...+..++++|+|+++++.    +             ..+.|..++.. ++. ..+
T Consensus        90 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~  167 (296)
T 3e5z_A           90 RRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAP  167 (296)
T ss_dssp             TEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEE
T ss_pred             CeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEe
Confidence            89999999888754433211    2345689999999988873    2             13467777765 443 333


Q ss_pred             eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCC---eEEEeccCCCceeeeeecCCCCeEEEEecCCCeE
Q psy17682        297 VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEP---IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVI  373 (490)
Q Consensus       297 ~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~---~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i  373 (490)
                      ..+.. ....++|+|+|+.+++.+   .++.|.+|++......   .... ......+..++++++|+++ ++.  ++.|
T Consensus       168 ~~~~~-~~~gi~~s~dg~~lv~~~---~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~-v~~--~~~v  239 (296)
T 3e5z_A          168 IRDRV-KPNGLAFLPSGNLLVSDT---GDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIW-ASA--GDGV  239 (296)
T ss_dssp             ECCCS-SEEEEEECTTSCEEEEET---TTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEE-EEE--TTEE
T ss_pred             ecCCC-CCccEEECCCCCEEEEeC---CCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEE-EEc--CCeE
Confidence            33333 378999999999885554   4678999998732222   1111 1233456789999999866 544  7889


Q ss_pred             EEEEecCCCCeeEEeeeeeCCCceeeEEE-eeCceeEEeecceeEEEEecCC
Q psy17682        374 RYFEITAEPPFVHYINTFQTPDPQRGIGM-MPKRGCDVNSCEIGRFFRLNNS  424 (490)
Q Consensus       374 ~iwd~~~~~~~~~~~~~~~~~~~i~~~~~-sp~~~~l~~~~~~~~~~~~~~~  424 (490)
                      .+|+.. ++    .+..+..+..+.+++| +|++..|..++.. .+|++...
T Consensus       240 ~~~~~~-g~----~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~-~l~~~~~~  285 (296)
T 3e5z_A          240 HVLTPD-GD----ELGRVLTPQTTSNLCFGGPEGRTLYMTVST-EFWSIETN  285 (296)
T ss_dssp             EEECTT-SC----EEEEEECSSCCCEEEEESTTSCEEEEEETT-EEEEEECS
T ss_pred             EEECCC-CC----EEEEEECCCCceeEEEECCCCCEEEEEcCC-eEEEEEcc
Confidence            999986 44    2333333333899999 5888766655443 56665543

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.66  E-value=5.3e-15  Score=152.35  Aligned_cols=249  Identities=8%  Similarity=-0.035  Sum_probs=163.6

Q ss_pred             ceeecccCCeeEEEECCCCCCEEEEE--eCCCcEEEEECCCCCcccccccceeeecccccCEE---------EEEEe--e
Q psy17682        159 ALVGGHKGPVLDIAWSPHDDNVIASG--SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVG---------LVLWH--P  225 (490)
Q Consensus       159 ~~~~~h~~~V~~~~~~p~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~--p  225 (490)
                      ..+.+|...+..++|++++ .++++.  +.++...||....+.....       +..+...+.         ...|+  |
T Consensus        17 ~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~-------l~~~~~~~~~~~~~~~~~~~~~~~SP   88 (662)
T 3azo_A           17 ALVASRSGRPACVGAVGDE-VWWVAPRPAEAGRATLVRRRADGAEES-------ALPAPWNVRNRVFEYSGFPWAGVPRP   88 (662)
T ss_dssp             HHHHHTCSCCEEEEEETTE-EEEEEEETTTTTEEEEEEECTTSCEEE-------SSCTTCCBCCCGGGTCCCCEEEECCS
T ss_pred             HHHhhcCCccceeEEcCCe-EEEEecCcccCCcEEEEEECCCCCcce-------eCCCCccccccccccCCccceeeeec
Confidence            3567899999999999865 566666  5688999999644433333       223444444         56666  9


Q ss_pred             CCCCEEEEEe-CCCcEEEEECC--C-CeeEEEEec-----CCCcEEEEEEcCCCCEEEEEeCC----------CeEEEEe
Q psy17682        226 TAQNVLLTAG-SDNNVAIWNVG--T-GEIMIQIEC-----HPDIVYSASWNWDGSKLLTTCKD----------KKMRIIN  286 (490)
Q Consensus       226 ~~~~~l~s~~-~dg~v~iwd~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------g~i~iwd  286 (490)
                      +|+.+|+.++ .+..|.++++.  . ++ ...+..     |...+..++|+|||+.|++++.+          ..|++||
T Consensus        89 Dg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~  167 (662)
T 3azo_A           89 AGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVP  167 (662)
T ss_dssp             SSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred             CCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEE
Confidence            9974144443 35677777765  2 43 445554     56678999999999999998876          5899999


Q ss_pred             CCC------Cceeeeee-ecCCCceeEEEEeCCCcEEEEEeCCC-----ceeEEEEecCC-CCC--CCeEEEeccCCCce
Q psy17682        287 PRT------GAIEEEAV-CHEGSKATRAIYLKSGLIFTTGFSKM-----SERQYSLRAPD-HLD--EPIVMVELDTSNGV  351 (490)
Q Consensus       287 ~~~------~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~~~~~~-----~~~~i~iwd~~-~~~--~~~~~~~~~~~~~i  351 (490)
                      +.+      ++.. .+. .+.. .+..+.|+|||+.|+.++.+.     ....|++||+. ++.  ....+. ..+...+
T Consensus       168 ~~~~~~~~~~~~~-~l~~~~~~-~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~-~~~~~~~  244 (662)
T 3azo_A          168 LDGSAAADRSAVR-ELSDDAHR-FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL-GGPEEAI  244 (662)
T ss_dssp             TTSTTTTCGGGSE-ESSCSCSS-EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE-EETTBCE
T ss_pred             CCCCccccCCcee-EEEecCCC-cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC-CCCCceE
Confidence            988      5443 333 3333 477889999999998776322     12689999998 441  222222 2335678


Q ss_pred             eeeeecCCCCeEEEEecCCC--eEEEEEecCCCCeeEEeeeeeCC--C-----ceeeEEEeeCceeEEeec-ceeEEEEe
Q psy17682        352 MFPLYDPDTNLVYLCGKGDS--VIRYFEITAEPPFVHYINTFQTP--D-----PQRGIGMMPKRGCDVNSC-EIGRFFRL  421 (490)
Q Consensus       352 ~~~~~s~~~~~l~~~g~~dg--~i~iwd~~~~~~~~~~~~~~~~~--~-----~i~~~~~sp~~~~l~~~~-~~~~~~~~  421 (490)
                      ..+.|+|||+ +++++..++  .|++||+.+++ . ..+......  .     .+..++|+|++.+++++. +..++|.+
T Consensus       245 ~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~-~-~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  321 (662)
T 3azo_A          245 AQAEWAPDGS-LIVATDRTGWWNLHRVDPATGA-A-TQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGIL  321 (662)
T ss_dssp             EEEEECTTSC-EEEEECTTSSCEEEEECTTTCC-E-EESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEE
T ss_pred             cceEECCCCe-EEEEECCCCCeEEEEEECCCCc-e-eecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEE
Confidence            9999999999 447777788  55555554554 2 222211110  0     156789999998877664 45577755


Q ss_pred             c
Q psy17682        422 N  422 (490)
Q Consensus       422 ~  422 (490)
                      +
T Consensus       322 d  322 (662)
T 3azo_A          322 D  322 (662)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.66  E-value=3e-12  Score=117.61  Aligned_cols=237  Identities=11%  Similarity=0.009  Sum_probs=158.4

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEEC
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNV  245 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~  245 (490)
                      ..+.++++.++| .++++...++.|..|+.. ++. ..+.     +......+.++++.+++. ++++...++.|.+||.
T Consensus        57 ~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~-~~~~-----~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~  127 (299)
T 2z2n_A           57 AKVMCLTISSDG-EVWFTENAANKIGRITKK-GII-KEYT-----LPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD  127 (299)
T ss_dssp             CCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCE-EEEE-----CSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT
T ss_pred             CceeeEEECCCC-CEEEeCCCCCeEEEECCC-CcE-EEEe-----CCCcCCCceeeEECCCCC-EEEEecCCceEEEECC
Confidence            568889999987 677777668889999975 332 2221     112445789999999884 7777767789999998


Q ss_pred             CCCeeEEE-EecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCc
Q psy17682        246 GTGEIMIQ-IECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMS  324 (490)
Q Consensus       246 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~  324 (490)
                       +++.... .......+..+++.++++.+++...++.|..||. +++............+..++++++|.++++..   .
T Consensus       128 -~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~---~  202 (299)
T 2z2n_A          128 -DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEI---I  202 (299)
T ss_dssp             -TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEET---T
T ss_pred             -CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEcc---C
Confidence             5554322 2234567899999999988887777789999998 66554321112223478999999999777664   4


Q ss_pred             eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee
Q psy17682        325 ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP  404 (490)
Q Consensus       325 ~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp  404 (490)
                      .+.|.+||. ++. ............+..++++++|+.+ ++...++.|..||. +++ + ...........+.++++ +
T Consensus       203 ~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~~~~g~l~-v~~~~~~~i~~~d~-~g~-~-~~~~~~~~~~~~~~i~~-~  275 (299)
T 2z2n_A          203 GNKIGRITT-SGE-ITEFKIPTPNARPHAITAGAGIDLW-FTEWGANKIGRLTS-NNI-I-EEYPIQIKSAEPHGICF-D  275 (299)
T ss_dssp             TTEEEEECT-TCC-EEEEECSSTTCCEEEEEECSTTCEE-EEETTTTEEEEEET-TTE-E-EEEECSSSSCCEEEEEE-C
T ss_pred             CceEEEECC-CCc-EEEEECCCCCCCceeEEECCCCCEE-EeccCCceEEEECC-CCc-e-EEEeCCCCCCccceEEe-c
Confidence            678999998 443 2222222234568899999999854 66656788999998 332 2 22211122356889999 8


Q ss_pred             CceeEEee-cceeEEEEecC
Q psy17682        405 KRGCDVNS-CEIGRFFRLNN  423 (490)
Q Consensus       405 ~~~~l~~~-~~~~~~~~~~~  423 (490)
                      ++.+.++. .+.+..++..+
T Consensus       276 ~g~l~v~~~~~~l~~~~~~~  295 (299)
T 2z2n_A          276 GETIWFAMECDKIGKLTLIK  295 (299)
T ss_dssp             SSCEEEEETTTEEEEEEEC-
T ss_pred             CCCEEEEecCCcEEEEEcCc
Confidence            88877765 33334444443

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.66  E-value=8.5e-14  Score=130.06  Aligned_cols=270  Identities=13%  Similarity=0.049  Sum_probs=179.1

Q ss_pred             CCceEEEECCCCCCCCcccCCCCcce-e--ecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeee
Q psy17682        135 SQQALSILPPPSTAPNTGRINADHAL-V--GGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDL  211 (490)
Q Consensus       135 ~~g~i~v~~~~~~~~~~~~~~~~~~~-~--~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~  211 (490)
                      .++.|.+++..     +++....+.. .  .........+.+..  +.++++...++.|.+||..+++.+..+.      
T Consensus        15 ~~~~l~~~d~~-----t~~~~~~i~~~~n~~~lg~~~~~i~~~~--~~lyv~~~~~~~v~viD~~t~~~~~~i~------   81 (328)
T 3dsm_A           15 SNATLSYYDPA-----TCEVENEVFYRANGFKLGDVAQSMVIRD--GIGWIVVNNSHVIFAIDINTFKEVGRIT------   81 (328)
T ss_dssp             CCBEEEEEETT-----TTEEECSHHHHHHSSCCBSCEEEEEEET--TEEEEEEGGGTEEEEEETTTCCEEEEEE------
T ss_pred             CCceEEEEECC-----CCEEhhhhHhhhcCcccCccceEEEEEC--CEEEEEEcCCCEEEEEECcccEEEEEcC------
Confidence            47889999884     3332221110 0  01224467787753  3677777778999999999998776652      


Q ss_pred             cccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCC-----CcEEEEEEcCCCCEEEEEe--CCCeEEE
Q psy17682        212 LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHP-----DIVYSASWNWDGSKLLTTC--KDKKMRI  284 (490)
Q Consensus       212 ~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~--~dg~i~i  284 (490)
                        .......+++++++ .++++...++.|.+||..+++....+....     .....+++ . +..++++.  .++.|.+
T Consensus        82 --~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~v  156 (328)
T 3dsm_A           82 --GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILK  156 (328)
T ss_dssp             --CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEE
T ss_pred             --CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEE
Confidence              34568899999998 465555578999999999998887776322     14567777 3 44455444  4889999


Q ss_pred             EeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCc-------eeEEEEecCCCCCCCeEEEeccCCCceeeeeec
Q psy17682        285 INPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMS-------ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYD  357 (490)
Q Consensus       285 wd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~-------~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s  357 (490)
                      +|+.+++...++....  ....++++|+|++++++..+..       .+.|.++|..+.+... ............++|+
T Consensus       157 iD~~t~~~~~~i~~g~--~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~-~~~~~~g~~p~~la~~  233 (328)
T 3dsm_A          157 IDTETDKVVDELTIGI--QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEK-QFKFKLGDWPSEVQLN  233 (328)
T ss_dssp             EETTTTEEEEEEECSS--CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEE-EEECCTTCCCEEEEEC
T ss_pred             EECCCCeEEEEEEcCC--CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEE-EEecCCCCCceeEEEe
Confidence            9999998887776432  3678899999998777652100       2689999998754221 2222223467899999


Q ss_pred             CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeC-CCceeeEEEee-CceeEEee------cceeEEEEecCCCceEE
Q psy17682        358 PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQT-PDPQRGIGMMP-KRGCDVNS------CEIGRFFRLNNSGLCQV  429 (490)
Q Consensus       358 ~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~i~~~~~sp-~~~~l~~~------~~~~~~~~~~~~~~~~~  429 (490)
                      |+++.|+++.+   .|.+||..+++...  ...... .....+++++| ++.+.++.      .+.+.+|+.. ++.+..
T Consensus       234 ~d~~~lyv~~~---~v~~~d~~t~~~~~--~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~  307 (328)
T 3dsm_A          234 GTRDTLYWINN---DIWRMPVEADRVPV--RPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDE  307 (328)
T ss_dssp             TTSCEEEEESS---SEEEEETTCSSCCS--SCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEE
T ss_pred             cCCCEEEEEcc---EEEEEECCCCceee--eeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEE
Confidence            99999976543   89999998876211  111111 34678999999 56666665      3355666666 554554


Q ss_pred             EE
Q psy17682        430 VS  431 (490)
Q Consensus       430 i~  431 (490)
                      +.
T Consensus       308 i~  309 (328)
T 3dsm_A          308 FY  309 (328)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.65  E-value=3.6e-14  Score=133.00  Aligned_cols=241  Identities=9%  Similarity=0.013  Sum_probs=165.9

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEEC
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNV  245 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~  245 (490)
                      ..|.++.|++++ ..++..+.++.++.|.   ++...       .+..+...+.+++|+|++. +++++..++.|.+||.
T Consensus         6 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~-------~~~~~~~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~   73 (333)
T 2dg1_A            6 QDLPTLFYSGKS-NSAVPIISESELQTIT---AEPWL-------EISKKGLQLEGLNFDRQGQ-LFLLDVFEGNIFKINP   73 (333)
T ss_dssp             CCCCBCCSCGGG-GCSSCCCCGGGSCEEE---CEEEE-------EEESSCCCEEEEEECTTSC-EEEEETTTCEEEEECT
T ss_pred             cccceeeecCCc-cceeEEeecccCcccc---cceeE-------EEeccCccccCcEECCCCC-EEEEECCCCEEEEEeC
Confidence            457788899876 5666667788889983   22212       2344666789999999985 7778888899999999


Q ss_pred             CCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC----CeEEEEeCCCCceeeeee-ecCCCceeEEEEeCCCcEEEEEe
Q psy17682        246 GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD----KKMRIINPRTGAIEEEAV-CHEGSKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       246 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~~~  320 (490)
                      .+++.......+...+.+++++|+|+++++...+    +.|.+||..++.....+. ......+..++++|+|+++++..
T Consensus        74 ~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~  153 (333)
T 2dg1_A           74 ETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDF  153 (333)
T ss_dssp             TTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred             CCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEec
Confidence            8887655444466789999999999988877666    689999998876543332 11233488999999999887664


Q ss_pred             CC---CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC-CCCeeE----Eeeeee
Q psy17682        321 SK---MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA-EPPFVH----YINTFQ  392 (490)
Q Consensus       321 ~~---~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~-~~~~~~----~~~~~~  392 (490)
                      ..   ...+.|..+|..+... ....  .....+..++|+|+|+.|+++.+.++.|++|++.+ +..+..    ....+.
T Consensus       154 ~~~~~~~~~~l~~~~~~~~~~-~~~~--~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~  230 (333)
T 2dg1_A          154 RGYSTNPLGGVYYVSPDFRTV-TPII--QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFT  230 (333)
T ss_dssp             CCBTTBCCEEEEEECTTSCCE-EEEE--EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECC
T ss_pred             cccccCCCceEEEEeCCCCEE-EEee--cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecC
Confidence            11   0135677777664332 1111  12234788999999998877777789999999974 332211    111111


Q ss_pred             CCCceeeEEEeeCceeEEee--cceeEEEEe
Q psy17682        393 TPDPQRGIGMMPKRGCDVNS--CEIGRFFRL  421 (490)
Q Consensus       393 ~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~  421 (490)
                      ....+.+++++++|.+.++.  .+.+.+|+.
T Consensus       231 ~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~  261 (333)
T 2dg1_A          231 GHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK  261 (333)
T ss_dssp             SSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred             CCCCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence            12367889999999887776  345666666

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.65  E-value=4.9e-12  Score=125.99  Aligned_cols=329  Identities=11%  Similarity=0.032  Sum_probs=209.9

Q ss_pred             ceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEEEeeCCCc
Q psy17682         58 NVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQ  137 (490)
Q Consensus        58 ~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g  137 (490)
                      .++++...+++|.++|..+++.                  ...+..      ......+.+||+.  +   .+.+++.++
T Consensus       168 ~~~V~~~~~~~V~viD~~t~~v------------------~~~i~~------g~~p~~v~~SpDG--r---~lyv~~~dg  218 (567)
T 1qks_A          168 LFSVTLRDAGQIALIDGSTYEI------------------KTVLDT------GYAVHISRLSASG--R---YLFVIGRDG  218 (567)
T ss_dssp             EEEEEETTTTEEEEEETTTCCE------------------EEEEEC------SSCEEEEEECTTS--C---EEEEEETTS
T ss_pred             eEEEEeCCCCeEEEEECCCCeE------------------EEEEeC------CCCccceEECCCC--C---EEEEEcCCC
Confidence            6778888899999999988652                  111111      0134578999996  2   333456788


Q ss_pred             eEEEECCCCCCCCcccCCCCcceeecccCCeeEEEEC----CCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeec-
Q psy17682        138 ALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWS----PHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLL-  212 (490)
Q Consensus       138 ~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~----p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-  212 (490)
                      .|.+|++..   .+.+   ....+... .....++|+    |+|+..+++...+++|.++|..+.+.+..+........ 
T Consensus       219 ~V~viD~~~---~t~~---~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~  291 (567)
T 1qks_A          219 KVNMIDLWM---KEPT---TVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDE  291 (567)
T ss_dssp             EEEEEETTS---SSCC---EEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTT
T ss_pred             eEEEEECCC---CCCc---EeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccccc
Confidence            999999830   0111   22333332 235789999    69854455556669999999998887766543211111 


Q ss_pred             --cccc-CEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee--EEEEecCCCcEEEEEEcCCCCEEEEEe-CCCeEEEEe
Q psy17682        213 --YHQR-RVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI--MIQIECHPDIVYSASWNWDGSKLLTTC-KDKKMRIIN  286 (490)
Q Consensus       213 --~~~~-~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd  286 (490)
                        .|.. .+..+..++++..++++...+|.|.++|..+.+.  +..+. .......+.|+|++++++++. .++.|.++|
T Consensus       292 ~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD  370 (567)
T 1qks_A          292 QEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVID  370 (567)
T ss_dssp             CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred             ccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEE
Confidence              1223 6888999998775677777789999999876543  22332 445677899999999887766 578999999


Q ss_pred             CCCCceeeeeee-cCCCce-eEE-EEeCC-CcEEEEEeCCCceeEEEEecCCCCCC----CeEEEeccCC-Cceeeeeec
Q psy17682        287 PRTGAIEEEAVC-HEGSKA-TRA-IYLKS-GLIFTTGFSKMSERQYSLRAPDHLDE----PIVMVELDTS-NGVMFPLYD  357 (490)
Q Consensus       287 ~~~~~~~~~~~~-~~~~~~-~~~-~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~----~~~~~~~~~~-~~i~~~~~s  357 (490)
                      +.+++.+..+.. ...... ... .++|+ +.+++++.-  .++.|.++|..+...    ...+..+... .+-..+..+
T Consensus       371 ~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~--g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~  448 (567)
T 1qks_A          371 TKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHM--GDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTH  448 (567)
T ss_dssp             TTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBS--SSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECC
T ss_pred             CCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCC--CCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeC
Confidence            999987776654 211111 122 26887 445454421  357899999887321    1223333222 333557789


Q ss_pred             CCCCeEEEEecC------CCeEEEEEecCC-----CCeeEEeee-----e-eCCCceeeEEEeeCceeEEee-------c
Q psy17682        358 PDTNLVYLCGKG------DSVIRYFEITAE-----PPFVHYINT-----F-QTPDPQRGIGMMPKRGCDVNS-------C  413 (490)
Q Consensus       358 ~~~~~l~~~g~~------dg~i~iwd~~~~-----~~~~~~~~~-----~-~~~~~i~~~~~sp~~~~l~~~-------~  413 (490)
                      |+++++++....      ...|.++|+.+.     ......+..     + ..+..+..+.|+|+|..+..+       .
T Consensus       449 p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~  528 (567)
T 1qks_A          449 PNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQE  528 (567)
T ss_dssp             TTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSC
T ss_pred             CCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCC
Confidence            999999875521      358999999977     322223321     1 124578999999999766554       2


Q ss_pred             ceeEEEEecCCC
Q psy17682        414 EIGRFFRLNNSG  425 (490)
Q Consensus       414 ~~~~~~~~~~~~  425 (490)
                      +.+.+++..+.+
T Consensus       529 ~~i~v~D~~t~~  540 (567)
T 1qks_A          529 SALVVVDDKTLE  540 (567)
T ss_dssp             CEEEEEETTTTE
T ss_pred             CcEEEEECCCce
Confidence            466666666655

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.64  E-value=2.8e-15  Score=144.04  Aligned_cols=243  Identities=9%  Similarity=-0.016  Sum_probs=156.0

Q ss_pred             ccCCeeEEEECCCCCCEEEEEeC-C--CcEEEEECCCCCcccccccceeeecccccC-EEEEEEeeCCCCEEEEEeCCCc
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGSE-D--CVVKVWQIPDGGISRTLTEPVVDLLYHQRR-VGLVLWHPTAQNVLLTAGSDNN  239 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~~-d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~p~~~~~l~s~~~dg~  239 (490)
                      |...+.+++|+|+| ++|+.... +  ..|.+||+.+++....        ..+... ...+.|+|+++ .|+.++.++.
T Consensus        34 ~~~~~~~~~~SpdG-~~l~~~~~~~g~~~l~~~d~~~~~~~~l--------~~~~~~~~~~~~~spdg~-~l~~~~~~~~  103 (396)
T 3c5m_A           34 HRNYFYQKCFTQDG-KKLLFAGDFDGNRNYYLLNLETQQAVQL--------TEGKGDNTFGGFISTDER-AFFYVKNELN  103 (396)
T ss_dssp             ECCCTTSCCBCTTS-CEEEEEECTTSSCEEEEEETTTTEEEEC--------CCSSCBCTTTCEECTTSS-EEEEEETTTE
T ss_pred             cceeeecCcCCCCC-CEEEEEEecCCCceEEEEECCCCcEEEe--------ecCCCCccccceECCCCC-EEEEEEcCCc
Confidence            34457888999999 56555543 3  3688889877654322        112222 23378999996 8888888889


Q ss_pred             EEEEECCCCeeEEEEecCCCcEEE-------------------EEEcCCCCEEEEE-----eCCCeEEEEeCCCCceeee
Q psy17682        240 VAIWNVGTGEIMIQIECHPDIVYS-------------------ASWNWDGSKLLTT-----CKDKKMRIINPRTGAIEEE  295 (490)
Q Consensus       240 v~iwd~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~dg~i~iwd~~~~~~~~~  295 (490)
                      |++||+.+++.......+......                   +.|+|+++.++..     ..+..|++||+.+++....
T Consensus       104 l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~  183 (396)
T 3c5m_A          104 LMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVI  183 (396)
T ss_dssp             EEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEE
T ss_pred             EEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEee
Confidence            999999988766555544432222                   3567777766654     3567899999998876554


Q ss_pred             eeecCCCceeEEEEeC-CCcEEEEEeCCCce---eEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC-
Q psy17682        296 AVCHEGSKATRAIYLK-SGLIFTTGFSKMSE---RQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD-  370 (490)
Q Consensus       296 ~~~~~~~~~~~~~~s~-~~~~l~~~~~~~~~---~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d-  370 (490)
                      .. +.. .+..+.|+| ++..|+..+....+   ..|.+||+..... ..+........+..+.|+|||++|++++..+ 
T Consensus       184 ~~-~~~-~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~  260 (396)
T 3c5m_A          184 HQ-DTA-WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKG  260 (396)
T ss_dssp             EE-ESS-CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEEEEETT
T ss_pred             cc-CCc-ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEEEEecCCC
Confidence            43 333 388999999 78877666532111   5788898875432 1111101123477899999999885554322 


Q ss_pred             ---CeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee-CceeEEeec------------------ceeEEEEecCCC
Q psy17682        371 ---SVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP-KRGCDVNSC------------------EIGRFFRLNNSG  425 (490)
Q Consensus       371 ---g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~------------------~~~~~~~~~~~~  425 (490)
                         +.|++||+.+++.  ..+....   ... +.|+| ||.+++.+.                  ..+.+|++.++.
T Consensus       261 ~~~~~l~~~d~~~g~~--~~l~~~~---~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~  331 (396)
T 3c5m_A          261 QTDRVIYKANPETLEN--EEVMVMP---PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS  331 (396)
T ss_dssp             TCCEEEEEECTTTCCE--EEEEECC---SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB
T ss_pred             CccceEEEEECCCCCe--EEeeeCC---CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc
Confidence               4599999988762  2222221   233 89999 998877632                  456667776665

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.63  E-value=1.3e-13  Score=142.49  Aligned_cols=247  Identities=11%  Similarity=0.020  Sum_probs=159.6

Q ss_pred             cccCCeeEEEECCCCCCEEE-----EEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        163 GHKGPVLDIAWSPHDDNVIA-----SGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~-----s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      +|...+.+++||||| ++|+     .|+.+..|++||+.+++.+....     +.  ......++|+|+|+ .|+.++.|
T Consensus       118 ~~~~~~~~~~~SPDG-~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~-----~~--~~~~~~~~wspDg~-~l~~~~~d  188 (695)
T 2bkl_A          118 DGTVSLGTWAVSWDG-KKVAFAQKPNAADEAVLHVIDVDSGEWSKVDV-----IE--GGKYATPKWTPDSK-GFYYEWLP  188 (695)
T ss_dssp             SSCEEEEEEEECTTS-SEEEEEEEETTCSCCEEEEEETTTCCBCSSCC-----BS--CCTTCCCEECTTSS-EEEEEECC
T ss_pred             CCCEEEEEEEECCCC-CEEEEEECCCCCceEEEEEEECCCCCCcCCcc-----cC--cccccceEEecCCC-EEEEEEec
Confidence            566679999999999 6666     33445689999999987641100     11  11126789999996 78888777


Q ss_pred             Cc-------------EEEEECCCCe----eEEEEecCCCcEEEEEEcCCCCEEEEEeCCC----eEEEEeCCCCceeeee
Q psy17682        238 NN-------------VAIWNVGTGE----IMIQIECHPDIVYSASWNWDGSKLLTTCKDK----KMRIINPRTGAIEEEA  296 (490)
Q Consensus       238 g~-------------v~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~  296 (490)
                      ..             |++|++.+++    .+.....+...+..+.|+|||++|+.++.++    .|+++|..+++. ..+
T Consensus       189 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l  267 (695)
T 2bkl_A          189 TDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLL  267 (695)
T ss_dssp             CCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEE
T ss_pred             CCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEe
Confidence            65             9999998776    3333334556789999999999998887666    788887765543 344


Q ss_pred             eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC--CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEE
Q psy17682        297 VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE--PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIR  374 (490)
Q Consensus       297 ~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~  374 (490)
                      ..+... .....+ ++|.+++.+..+..++.|.+||+.+...  ...+........+..++|+ ++ .++++...|+..+
T Consensus       268 ~~~~~~-~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~  343 (695)
T 2bkl_A          268 VKGVGA-KYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GG-HLSLEYLKDATSE  343 (695)
T ss_dssp             EECSSC-CEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TT-EEEEEEEETTEEE
T ss_pred             ecCCCc-eEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CC-EEEEEEEECCEEE
Confidence            444443 444555 5666444433233468999999987542  1222221223457778887 44 5558888999988


Q ss_pred             EEEec-CCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-c-----ceeEEEEecCCC
Q psy17682        375 YFEIT-AEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-C-----EIGRFFRLNNSG  425 (490)
Q Consensus       375 iwd~~-~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~-----~~~~~~~~~~~~  425 (490)
                      ||.+. +++ ..+.+. +.....+..++++|++..++.. .     ..+.+|++.+++
T Consensus       344 l~~~~~~g~-~~~~l~-~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~  399 (695)
T 2bkl_A          344 VRVATLKGK-PVRTVQ-LPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK  399 (695)
T ss_dssp             EEEEETTCC-EEEECC-CSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred             EEEEeCCCC-eeEEec-CCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            88876 343 222221 2223567888999988655522 1     256677777666

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.63  E-value=1.6e-13  Score=129.39  Aligned_cols=242  Identities=12%  Similarity=0.106  Sum_probs=153.4

Q ss_pred             CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCC---C--cEEEEECCCCCcccccccceee
Q psy17682        136 QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSED---C--VVKVWQIPDGGISRTLTEPVVD  210 (490)
Q Consensus       136 ~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~d---g--~i~iwd~~~~~~~~~~~~~~~~  210 (490)
                      .+.|.++++.     .++    ...+    ..+..++|+|+| +.|+.++.+   +  .|.+|++.+++....       
T Consensus        42 ~~~l~~~d~~-----~~~----~~~l----~~~~~~~~SpDg-~~la~~~~~~~~~~~~l~~~~~~~g~~~~l-------  100 (347)
T 2gop_A           42 ENTIVIENLK-----NNA----RRFI----ENATMPRISPDG-KKIAFMRANEEKKVSEIWVADLETLSSKKI-------  100 (347)
T ss_dssp             EEEEEEEETT-----TCC----EEEE----ESCEEEEECTTS-SEEEEEEEETTTTEEEEEEEETTTTEEEEE-------
T ss_pred             cceEEEEeCC-----CCc----eEEc----ccCCCeEECCCC-CEEEEEEeccCCCcceEEEEECCCCceEEE-------
Confidence            4567778774     121    1222    568899999999 677766543   3  377788876654322       


Q ss_pred             ecccccCEEEEEEeeCCCCEEEEEeC---------------------------CCcEEEEECCCCeeEEEEecCCCcEEE
Q psy17682        211 LLYHQRRVGLVLWHPTAQNVLLTAGS---------------------------DNNVAIWNVGTGEIMIQIECHPDIVYS  263 (490)
Q Consensus       211 ~~~~~~~v~~~~~~p~~~~~l~s~~~---------------------------dg~v~iwd~~~~~~~~~~~~~~~~v~~  263 (490)
                       ..+.. +..++|+|+++ .|+.++.                           ...|.+||+.+++.+..+.. . .+..
T Consensus       101 -~~~~~-~~~~~wspdg~-~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~  175 (347)
T 2gop_A          101 -LEAKN-IRSLEWNEDSR-KLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSS  175 (347)
T ss_dssp             -EEESE-EEEEEECTTSS-EEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCE
T ss_pred             -EcCCC-ccceeECCCCC-EEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-Cccc
Confidence             11333 89999999996 5665542                           25799999998887455554 3 7889


Q ss_pred             EEEcCCCCEEEEEeCCC---------eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCC-----ceeEEE
Q psy17682        264 ASWNWDGSKLLTTCKDK---------KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKM-----SERQYS  329 (490)
Q Consensus       264 ~~~~~~~~~l~~~~~dg---------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~-----~~~~i~  329 (490)
                      ++|+|+| +++++..++         .|+++|  +++. ..+..+ . .+..+  +|+|+.|+.++.+.     ....|.
T Consensus       176 ~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~~-~-~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~  247 (347)
T 2gop_A          176 GIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKE-EKMFEK-V-SFYAV--DSDGERILLYGKPEKKYMSEHNKLY  247 (347)
T ss_dssp             EEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEE-EEEEEE-E-SEEEE--EECSSCEEEEECCSSSCCCSSCEEE
T ss_pred             ccCCCCe-EEEEEecccccccccccccEEEeC--CCce-EEeccC-c-ceeeE--CCCCCEEEEEEccccCCccccceEE
Confidence            9999999 777776542         455555  4443 334333 2 24443  99999887766432     135788


Q ss_pred             EecCCCCCCCeEEEeccCCCceee-eeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCcee
Q psy17682        330 LRAPDHLDEPIVMVELDTSNGVMF-PLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGC  408 (490)
Q Consensus       330 iwd~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~  408 (490)
                      +||  +++  .......+...+.. +.|+ ++ . +++++.++.++|| +.+++ .. .+  ..+...+.+++|+| +.+
T Consensus       248 ~~d--~~~--~~~l~~~~~~~~~~~~~~s-dg-~-~~~~~~~~~~~l~-~~~g~-~~-~~--~~~~~~v~~~~~s~-~~~  314 (347)
T 2gop_A          248 IYD--GKE--VMGILDEVDRGVGQAKIKD-GK-V-YFTLFEEGSVNLY-IWDGE-IK-PI--AKGRHWIMGFDVDE-IVV  314 (347)
T ss_dssp             EEC--SSC--EEESSTTCCSEEEEEEEET-TE-E-EEEEEETTEEEEE-EESSS-EE-EE--ECSSSEEEEEEESS-SEE
T ss_pred             EEC--CCc--eEeccccCCcccCCccEEc-Cc-E-EEEEecCCcEEEE-EcCCc-eE-EE--ecCCCeEEeeeeeC-cEE
Confidence            888  322  11112233456775 8999 88 4 4788889999999 88544 22 22  23456789999999 533


Q ss_pred             EEeec-ce-eEEEEecCCC
Q psy17682        409 DVNSC-EI-GRFFRLNNSG  425 (490)
Q Consensus       409 l~~~~-~~-~~~~~~~~~~  425 (490)
                      ++.+. .. .++|.+. ++
T Consensus       315 ~~~~~~~~~~~l~~~~-g~  332 (347)
T 2gop_A          315 YLKETATRLRELFTWD-GE  332 (347)
T ss_dssp             EEEECSSSCCEEEEES-SS
T ss_pred             EEEcCCCChHHheEeC-Cc
Confidence            33332 22 3788887 44

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.62  E-value=7.3e-14  Score=144.41  Aligned_cols=202  Identities=10%  Similarity=0.016  Sum_probs=127.8

Q ss_pred             eEEEECCCCCCEEEEEeCCCc-------------EEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe
Q psy17682        169 LDIAWSPHDDNVIASGSEDCV-------------VKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG  235 (490)
Q Consensus       169 ~~~~~~p~~~~~l~s~~~dg~-------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~  235 (490)
                      ..++|+||| +.|+.++.|..             |++|++.++.....   .+.....+...+.++.|+|+|+ +|+.++
T Consensus       171 ~~~~wspDg-~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~---lv~~~~~~~~~~~~~~~SpDG~-~l~~~~  245 (695)
T 2bkl_A          171 ATPKWTPDS-KGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDT---VVHERTGDPTTFLQSDLSRDGK-YLFVYI  245 (695)
T ss_dssp             CCCEECTTS-SEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCE---EEECCCCCTTCEEEEEECTTSC-CEEEEE
T ss_pred             cceEEecCC-CEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhce---EEEecCCCCEEEEEEEECCCCC-EEEEEE
Confidence            467899988 67777777765             99999987753211   1111223556789999999997 555554


Q ss_pred             CCC----cEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe---CCCeEEEEeCCCCce--eeeeeecC-CCcee
Q psy17682        236 SDN----NVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC---KDKKMRIINPRTGAI--EEEAVCHE-GSKAT  305 (490)
Q Consensus       236 ~dg----~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~--~~~~~~~~-~~~~~  305 (490)
                      .++    .|.+|+..+++. ..+..+...+....+ ++|.+++.+.   .++.|.+||+.+++.  ...+..+. ...+.
T Consensus       246 ~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~  323 (695)
T 2bkl_A          246 LRGWSENDVYWKRPGEKDF-RLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLL  323 (695)
T ss_dssp             EETTTEEEEEEECTTCSSC-EEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEE
T ss_pred             eCCCCceEEEEEcCCCCce-EEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEE
Confidence            444    677777655543 444445556666666 5666444433   257899999987753  23343332 44477


Q ss_pred             EEEEeCCCcEEEEEeCCCceeEEEEecCCC-CCCCeEEEeccCCCceeeeeecCCCCeEEEEec---CCCeEEEEEecCC
Q psy17682        306 RAIYLKSGLIFTTGFSKMSERQYSLRAPDH-LDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK---GDSVIRYFEITAE  381 (490)
Q Consensus       306 ~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~---~dg~i~iwd~~~~  381 (490)
                      .+.++ ++.++++..   .++..++|.+.. +.. ......+....+..+.++|+++.++++.+   ..+.|++||+.++
T Consensus       324 ~~~~~-~~~lv~~~~---~dg~~~l~~~~~~g~~-~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g  398 (695)
T 2bkl_A          324 SVSIV-GGHLSLEYL---KDATSEVRVATLKGKP-VRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTG  398 (695)
T ss_dssp             EEEEE-TTEEEEEEE---ETTEEEEEEEETTCCE-EEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred             EEEEE-CCEEEEEEE---ECCEEEEEEEeCCCCe-eEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence            78888 677777776   455555554331 221 11122233456788899999988765543   3478999999887


Q ss_pred             C
Q psy17682        382 P  382 (490)
Q Consensus       382 ~  382 (490)
                      +
T Consensus       399 ~  399 (695)
T 2bkl_A          399 K  399 (695)
T ss_dssp             C
T ss_pred             c
Confidence            6

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.62  E-value=3.1e-13  Score=124.38  Aligned_cols=248  Identities=12%  Similarity=0.038  Sum_probs=165.8

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      ...+..+..+.....+++|+|+++.+++++..++.|..|+..++ .                                  
T Consensus        17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~----------------------------------   61 (296)
T 3e5z_A           17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L----------------------------------   61 (296)
T ss_dssp             TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E----------------------------------
T ss_pred             CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e----------------------------------
Confidence            34455666778889999999999448888888899999987652 1                                  


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                                                .                   .+..+...+.+++++|+| +++++...++.|.+|
T Consensus        62 --------------------------~-------------------~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~   95 (296)
T 3e5z_A           62 --------------------------S-------------------PEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQ   95 (296)
T ss_dssp             --------------------------E-------------------EEESSCSSEEEEEECTTC-CEEEEETTTTEEEEE
T ss_pred             --------------------------E-------------------EEECCCCCcceeeECCCC-cEEEEecCCCeEEEE
Confidence                                      0                   111234568899999988 677777777899999


Q ss_pred             ECCCCCcccccccceeeecc-cccCEEEEEEeeCCCCEEEEE----e-------------CCCcEEEEECCCCeeEEEEe
Q psy17682        194 QIPDGGISRTLTEPVVDLLY-HQRRVGLVLWHPTAQNVLLTA----G-------------SDNNVAIWNVGTGEIMIQIE  255 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~----~-------------~dg~v~iwd~~~~~~~~~~~  255 (490)
                      |..+++.......    ..+ ....+..++++|+|. ++++.    +             ..+.|..++.. ++ +..+.
T Consensus        96 d~~~g~~~~~~~~----~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~  168 (296)
T 3e5z_A           96 REPGGEWESIADS----FEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPI  168 (296)
T ss_dssp             CSTTCCEEEEECE----ETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEE
T ss_pred             cCCCCcEEEEeec----cCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEee
Confidence            9877764322110    111 123467899999995 77763    2             12456666654 44 34445


Q ss_pred             cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCce---eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEe
Q psy17682        256 CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPR-TGAI---EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLR  331 (490)
Q Consensus       256 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~---~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iw  331 (490)
                      .+......++|+|+++.+++.+.++.|++||+. +++.   ...+.. ....+..++++++|+++++.     ++.|.+|
T Consensus       169 ~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~-~~~~p~~i~~d~~G~l~v~~-----~~~v~~~  242 (296)
T 3e5z_A          169 RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTV-EPGKTDGLRVDAGGLIWASA-----GDGVHVL  242 (296)
T ss_dssp             CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECC-SSSCCCSEEEBTTSCEEEEE-----TTEEEEE
T ss_pred             cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeC-CCCCCCeEEECCCCCEEEEc-----CCeEEEE
Confidence            566778999999999988777778999999987 4544   223322 22236789999999977665     4579999


Q ss_pred             cCCCCCCCeEEEeccCCCceeeeee-cCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        332 APDHLDEPIVMVELDTSNGVMFPLY-DPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       332 d~~~~~~~~~~~~~~~~~~i~~~~~-s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      |.. ++. ..... .+.. +.+++| +|+++.|+++. .+ .+.-++..+.
T Consensus       243 ~~~-g~~-~~~~~-~~~~-~~~~~f~~~d~~~L~v~t-~~-~l~~~~~~~~  287 (296)
T 3e5z_A          243 TPD-GDE-LGRVL-TPQT-TSNLCFGGPEGRTLYMTV-ST-EFWSIETNVR  287 (296)
T ss_dssp             CTT-SCE-EEEEE-CSSC-CCEEEEESTTSCEEEEEE-TT-EEEEEECSCC
T ss_pred             CCC-CCE-EEEEE-CCCC-ceeEEEECCCCCEEEEEc-CC-eEEEEEcccc
Confidence            986 332 22222 2223 888999 68999986554 44 3444555444

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.61  E-value=3.6e-13  Score=139.59  Aligned_cols=206  Identities=9%  Similarity=0.012  Sum_probs=136.4

Q ss_pred             eeEEEECCCCCCEEEEEeCCCc----------------EEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEE
Q psy17682        168 VLDIAWSPHDDNVIASGSEDCV----------------VKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVL  231 (490)
Q Consensus       168 V~~~~~~p~~~~~l~s~~~dg~----------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l  231 (490)
                      +.+++|+||| +.|+.++.++.                |++|++.+++....+   +.....|...+..+.|+|+|+ .|
T Consensus       173 ~~~~~wspDg-~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~---v~~~~~~~~~~~~~~~SpDg~-~l  247 (710)
T 2xdw_A          173 FSCMAWTHDG-KGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDIL---CAEFPDEPKWMGGAELSDDGR-YV  247 (710)
T ss_dssp             SCCEEECTTS-SEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEE---EECCTTCTTCEEEEEECTTSC-EE
T ss_pred             cceEEEEeCC-CEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceE---EeccCCCCeEEEEEEEcCCCC-EE
Confidence            4567888887 66666666654                999999876532111   111222455688999999997 55


Q ss_pred             EEEeC-----CCcEEEEECCC------Ce-eEEEEecCCCcEEEEEEcCCCCEEEEEeCC----CeEEEEeCCCCce--e
Q psy17682        232 LTAGS-----DNNVAIWNVGT------GE-IMIQIECHPDIVYSASWNWDGSKLLTTCKD----KKMRIINPRTGAI--E  293 (490)
Q Consensus       232 ~s~~~-----dg~v~iwd~~~------~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~--~  293 (490)
                      +.++.     +..|.+||+.+      ++ ....+..+...+.. .|+|+|+.|+..+..    +.|.+||+.++..  .
T Consensus       248 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~  326 (710)
T 2xdw_A          248 LLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKW  326 (710)
T ss_dssp             EEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGC
T ss_pred             EEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccc
Confidence            55543     56899999976      43 35556656655554 488899887776653    3699999987742  3


Q ss_pred             eeeeecCC-CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEec---C
Q psy17682        294 EEAVCHEG-SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK---G  369 (490)
Q Consensus       294 ~~~~~~~~-~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~---~  369 (490)
                      ..+..+.. ..+..+.|++++.++++...++ ...|.+|++.++..... ... +...+..+.++|+++.++++.+   .
T Consensus       327 ~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g-~~~l~~~~~~~g~~~~~-l~~-~~~~v~~~~~s~d~~~l~~~~ss~~~  403 (710)
T 2xdw_A          327 KVLVPEHEKDVLEWVACVRSNFLVLCYLHDV-KNTLQLHDLATGALLKI-FPL-EVGSVVGYSGQKKDTEIFYQFTSFLS  403 (710)
T ss_dssp             EEEECCCSSCEEEEEEEETTTEEEEEEEETT-EEEEEEEETTTCCEEEE-ECC-CSSEEEEEECCTTCSEEEEEEECSSC
T ss_pred             eeccCCCCCCeEEEEEEEcCCEEEEEEEECC-EEEEEEEECCCCCEEEe-cCC-CCceEEEEecCCCCCEEEEEEeCCCC
Confidence            44444433 3477888998888888776432 34677888755542222 222 3456788999999987765543   3


Q ss_pred             CCeEEEEEecCCC
Q psy17682        370 DSVIRYFEITAEP  382 (490)
Q Consensus       370 dg~i~iwd~~~~~  382 (490)
                      .+.|++||+.+++
T Consensus       404 P~~i~~~d~~tg~  416 (710)
T 2xdw_A          404 PGIIYHCDLTKEE  416 (710)
T ss_dssp             CCEEEEEETTSSS
T ss_pred             CCEEEEEECCCCc
Confidence            4789999998876

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.61  E-value=2.9e-13  Score=140.30  Aligned_cols=247  Identities=12%  Similarity=0.088  Sum_probs=159.9

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCC-C----cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSED-C----VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~d-g----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      +|...+..++||||| ++|+.+..+ |    .|++||+.+++.....      +  ....+.+++|+|+|+ .|+.++.+
T Consensus       122 ~~~~~~~~~~~SPDg-~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~------~--~~~~~~~~~wspDg~-~l~~~~~~  191 (710)
T 2xdw_A          122 DGTVALRGYAFSEDG-EYFAYGLSASGSDWVTIKFMKVDGAKELPDV------L--ERVKFSCMAWTHDGK-GMFYNAYP  191 (710)
T ss_dssp             TSCEEEEEEEECTTS-SEEEEEEEETTCSCEEEEEEETTTTEEEEEE------E--EEECSCCEEECTTSS-EEEEEECC
T ss_pred             CCCEEEEEEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCCccc------c--cCcccceEEEEeCCC-EEEEEEEC
Confidence            455578899999999 666655443 3    8999999988764321      1  122366899999996 77777776


Q ss_pred             Cc----------------EEEEECCCCee--EEEEe--cCCCcEEEEEEcCCCCEEEEEeC-----CCeEEEEeCCC---
Q psy17682        238 NN----------------VAIWNVGTGEI--MIQIE--CHPDIVYSASWNWDGSKLLTTCK-----DKKMRIINPRT---  289 (490)
Q Consensus       238 g~----------------v~iwd~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~---  289 (490)
                      +.                |++|++.+++.  ...+.  .+...+..+.|+|||++|+.++.     +..|++||+.+   
T Consensus       192 ~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~  271 (710)
T 2xdw_A          192 QQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESN  271 (710)
T ss_dssp             CCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSS
T ss_pred             CccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccc
Confidence            55                99999987752  22233  34556889999999999888765     56899999986   


Q ss_pred             ---Cc-eeeeeeecCCCceeEEEEeCCCcEEEEEeCC-CceeEEEEecCCCCCC--CeEEEeccCCCceeeeeecCCCCe
Q psy17682        290 ---GA-IEEEAVCHEGSKATRAIYLKSGLIFTTGFSK-MSERQYSLRAPDHLDE--PIVMVELDTSNGVMFPLYDPDTNL  362 (490)
Q Consensus       290 ---~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~-~~~~~i~iwd~~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~  362 (490)
                         +. ....+..+... .. ..|+++|..|+..+.. .....|.+||+.+...  ...+........+..+.|++++.+
T Consensus       272 ~~~~~~~~~~l~~~~~~-~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l  349 (710)
T 2xdw_A          272 GITGILKWVKLIDNFEG-EY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFL  349 (710)
T ss_dssp             SSCSSCCCEEEECSSSS-CE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEE
T ss_pred             ccCCccceEEeeCCCCc-EE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEE
Confidence               43 34555555443 33 3588888877665532 2356899999987542  122222111125778888865554


Q ss_pred             EEEEecCCCe--EEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-c-----ceeEEEEecCCC
Q psy17682        363 VYLCGKGDSV--IRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-C-----EIGRFFRLNNSG  425 (490)
Q Consensus       363 l~~~g~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~-----~~~~~~~~~~~~  425 (490)
                       +++...|+.  |++|++.+++. .+.+..  +...+.+++++|++..++.. .     ..+..|++.+++
T Consensus       350 -v~~~~~~g~~~l~~~~~~~g~~-~~~l~~--~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          350 -VLCYLHDVKNTLQLHDLATGAL-LKIFPL--EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             -EEEEEETTEEEEEEEETTTCCE-EEEECC--CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             -EEEEEECCEEEEEEEECCCCCE-EEecCC--CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence             477878875  45556656652 223321  24568889999988544422 2     255666666554

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.61  E-value=3.6e-13  Score=122.01  Aligned_cols=200  Identities=10%  Similarity=0.039  Sum_probs=140.9

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEEC
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNV  245 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~  245 (490)
                      ..+.+++++++| +++++.. ++.|.+||...... ..+.      ......+.++++.+++. ++++...++.|.+|+.
T Consensus        67 ~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~~~~-~~~~------~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~  136 (270)
T 1rwi_B           67 YQPQGLAVDGAG-TVYVTDF-NNRVVTLAAGSNNQ-TVLP------FDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAA  136 (270)
T ss_dssp             CSCCCEEECTTC-CEEEEET-TTEEEEECTTCSCC-EECC------CCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECT
T ss_pred             CCcceeEECCCC-CEEEEcC-CCEEEEEeCCCceE-eeee------cCCcCCCcceEECCCCC-EEEEECCCCEEEEEEC
Confidence            346788999987 5666555 88999999765433 2111      11235689999999985 7777777889999986


Q ss_pred             CCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCce
Q psy17682        246 GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSE  325 (490)
Q Consensus       246 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~  325 (490)
                      .+.............+.+++++++|+++++...++.|.+||.............. ..+..++++++|.++++..   .+
T Consensus       137 ~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~---~~  212 (270)
T 1rwi_B          137 GSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEH---NT  212 (270)
T ss_dssp             TCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEET---TT
T ss_pred             CCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCC-CCceEEEECCCCCEEEEEC---CC
Confidence            6554333222233467889999999977777778899999988766443322222 3488999999998777765   46


Q ss_pred             eEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        326 RQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       326 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      +.|.+|+......  ......+...+..++++++|+ |+++...++.|+++++...+
T Consensus       213 ~~v~~~~~~~~~~--~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~~~  266 (270)
T 1rwi_B          213 NQVVKLLAGSTTS--TVLPFTGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSLEHH  266 (270)
T ss_dssp             SCEEEECTTCSCC--EECCCCSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCCGGG
T ss_pred             CcEEEEcCCCCcc--eeeccCCCCCceeEEECCCCC-EEEEECCCCEEEEEcCCCcc
Confidence            7899999875432  122222335688999999997 55788889999999998765

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.60  E-value=4.1e-13  Score=121.74  Aligned_cols=226  Identities=11%  Similarity=0.083  Sum_probs=168.0

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceeeecccc-cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecC
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQ-RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH  257 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~  257 (490)
                      ++|++++.|+.|.+||.++++.+..+..       +. ..+.++.+.|+|. +++  +.++.|..||. +++.+.++..+
T Consensus         6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~-------~~~~~~~~~~~~pdG~-ilv--s~~~~V~~~d~-~G~~~W~~~~~   74 (276)
T 3no2_A            6 HLLVGGSGWNKIAIINKDTKEIVWEYPL-------EKGWECNSVAATKAGE-ILF--SYSKGAKMITR-DGRELWNIAAP   74 (276)
T ss_dssp             EEEEECTTCSEEEEEETTTTEEEEEEEC-------CTTCCCCEEEECTTSC-EEE--ECBSEEEEECT-TSCEEEEEECC
T ss_pred             cEEEeeCCCCEEEEEECCCCeEEEEeCC-------CccCCCcCeEECCCCC-EEE--eCCCCEEEECC-CCCEEEEEcCC
Confidence            7999999999999999989988776542       33 4678999999995 777  45788999999 89999998864


Q ss_pred             -CCcEEEEEEcCCCCEEEEEeC-CCeEEEEeCCCCceeeeeeecCC-----CceeEEEEeCCCcEEEEEeCCCceeEEEE
Q psy17682        258 -PDIVYSASWNWDGSKLLTTCK-DKKMRIINPRTGAIEEEAVCHEG-----SKATRAIYLKSGLIFTTGFSKMSERQYSL  330 (490)
Q Consensus       258 -~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~~l~~~~~~~~~~~i~i  330 (490)
                       ...+.++.+.++|+.+++.+. ++.+..+|. +++.+.++.....     .....+...++|.++++..   .++.|..
T Consensus        75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~---~~~~v~~  150 (276)
T 3no2_A           75 AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF---ATSEVRE  150 (276)
T ss_dssp             TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET---TTTEEEE
T ss_pred             CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEec---CCCEEEE
Confidence             357889999999999999887 888988886 6777766652211     1245567889999999887   5789999


Q ss_pred             ecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee--C--CCceeeEEEeeCc
Q psy17682        331 RAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ--T--PDPQRGIGMMPKR  406 (490)
Q Consensus       331 wd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~--~--~~~i~~~~~sp~~  406 (490)
                      ||.. ++....   .........+.+.++|+.+ +++..++.|..+|..+++.+.+ +....  .  -..+.+++..++|
T Consensus       151 ~d~~-G~~~w~---~~~~~~~~~~~~~~~g~~~-v~~~~~~~v~~~d~~tG~~~w~-~~~~~~~~~~l~~~~~~~~~~~G  224 (276)
T 3no2_A          151 IAPN-GQLLNS---VKLSGTPFSSAFLDNGDCL-VACGDAHCFVQLNLESNRIVRR-VNANDIEGVQLFFVAQLFPLQNG  224 (276)
T ss_dssp             ECTT-SCEEEE---EECSSCCCEEEECTTSCEE-EECBTTSEEEEECTTTCCEEEE-EEGGGSBSCCCSEEEEEEECTTS
T ss_pred             ECCC-CCEEEE---EECCCCccceeEcCCCCEE-EEeCCCCeEEEEeCcCCcEEEE-ecCCCCCCccccccccceEcCCC
Confidence            9988 653322   2333456677888999988 6677778999999998883322 22111  1  1236888899999


Q ss_pred             eeEEeec----------ceeEEEEecCCC
Q psy17682        407 GCDVNSC----------EIGRFFRLNNSG  425 (490)
Q Consensus       407 ~~l~~~~----------~~~~~~~~~~~~  425 (490)
                      .++++..          +..+++.++..+
T Consensus       225 ~i~v~~~~g~~~~~~~~~~~~~~~~~~~g  253 (276)
T 3no2_A          225 GLYICNWQGHDREAGKGKHPQLVEIDSEG  253 (276)
T ss_dssp             CEEEEEECTTCTTGGGSCCCSEEEECTTS
T ss_pred             CEEEEeccCccccccccCCceEEEECCCC
Confidence            8888762          245788886544

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.60  E-value=1.6e-12  Score=129.44  Aligned_cols=231  Identities=12%  Similarity=0.086  Sum_probs=167.8

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC--CCeeEEEEec
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG--TGEIMIQIEC  256 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~  256 (490)
                      .++++...+++|.++|..+++.+..+.        ....+..+.|+|+++ ++++++.|+.|.+||+.  +++.+.++..
T Consensus       168 ~~~V~~~~~~~V~viD~~t~~v~~~i~--------~g~~p~~v~~SpDGr-~lyv~~~dg~V~viD~~~~t~~~v~~i~~  238 (567)
T 1qks_A          168 LFSVTLRDAGQIALIDGSTYEIKTVLD--------TGYAVHISRLSASGR-YLFVIGRDGKVNMIDLWMKEPTTVAEIKI  238 (567)
T ss_dssp             EEEEEETTTTEEEEEETTTCCEEEEEE--------CSSCEEEEEECTTSC-EEEEEETTSEEEEEETTSSSCCEEEEEEC
T ss_pred             eEEEEeCCCCeEEEEECCCCeEEEEEe--------CCCCccceEECCCCC-EEEEEcCCCeEEEEECCCCCCcEeEEEec
Confidence            677777889999999999998776653        334567999999996 78888899999999995  7888888874


Q ss_pred             CCCcEEEEEEc----CCCCEEEEEeC-CCeEEEEeCCCCceeeeeee----------cCCCceeEEEEeCCCcEEEEEeC
Q psy17682        257 HPDIVYSASWN----WDGSKLLTTCK-DKKMRIINPRTGAIEEEAVC----------HEGSKATRAIYLKSGLIFTTGFS  321 (490)
Q Consensus       257 ~~~~v~~~~~~----~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~----------~~~~~~~~~~~s~~~~~l~~~~~  321 (490)
                       ......++|+    |+|+++++++. ++++.++|..+.+.+.++..          |....+..+..++++..++....
T Consensus       239 -G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~  317 (567)
T 1qks_A          239 -GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK  317 (567)
T ss_dssp             -CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred             -CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec
Confidence             4457899999    69998887764 58999999999998887652          12334778888888665555442


Q ss_pred             CCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee-eeCCCceeeE
Q psy17682        322 KMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT-FQTPDPQRGI  400 (490)
Q Consensus       322 ~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~i~~~  400 (490)
                        ..+.|.++|....... ....+........+.|+|+|++++++...++.|.++|+.+++ +...+.. -..+.+-+++
T Consensus       318 --~~g~v~~vd~~~~~~~-~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k-l~~~i~vgg~~Phpg~g~  393 (567)
T 1qks_A          318 --ETGKILLVDYTDLNNL-KTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK-LVAIEDTGGQTPHPGRGA  393 (567)
T ss_dssp             --TTTEEEEEETTCSSEE-EEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE-EEEEEECSSSSBCCTTCE
T ss_pred             --CCCeEEEEecCCCccc-eeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc-EEEEEeccCcCCCCccce
Confidence              4789999998765422 233334445577889999999998888788999999999986 3333322 1112222444


Q ss_pred             E-EeeC-ceeEEee---cceeEEEEecC
Q psy17682        401 G-MMPK-RGCDVNS---CEIGRFFRLNN  423 (490)
Q Consensus       401 ~-~sp~-~~~l~~~---~~~~~~~~~~~  423 (490)
                      . ++|+ +.+.+++   ++.+.+++..+
T Consensus       394 ~~~~p~~g~v~~t~~~g~~~Vsvid~~~  421 (567)
T 1qks_A          394 NFVHPTFGPVWATSHMGDDSVALIGTDP  421 (567)
T ss_dssp             EEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred             eeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence            4 4787 4444443   35788888876

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.59  E-value=6.4e-13  Score=120.37  Aligned_cols=236  Identities=10%  Similarity=0.019  Sum_probs=158.1

Q ss_pred             CeeEEEECCCCCCEEE-EEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEEC
Q psy17682        167 PVLDIAWSPHDDNVIA-SGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNV  245 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~  245 (490)
                      ...+++++++| ++++ +...++.|.+|+..+..... +.      ..+...+.++++.+++. ++++.. ++.|.+||.
T Consensus        25 ~p~~i~~~~~g-~l~v~~~~~~~~i~~~~~~~~~~~~-~~------~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~~~d~   94 (270)
T 1rwi_B           25 SPSGVAVDSAG-NVYVTSEGMYGRVVKLATGSTGTTV-LP------FNGLYQPQGLAVDGAGT-VYVTDF-NNRVVTLAA   94 (270)
T ss_dssp             CEEEEEECTTC-CEEEEECSSSCEEEEECC-----EE-CC------CCSCCSCCCEEECTTCC-EEEEET-TTEEEEECT
T ss_pred             CccceEECCCC-CEEEEccCCCCcEEEecCCCcccce-Ee------eCCcCCcceeEECCCCC-EEEEcC-CCEEEEEeC
Confidence            77899999988 6666 54778899999875543221 11      11334678899999985 666655 889999998


Q ss_pred             CCCeeEEEEe-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCc
Q psy17682        246 GTGEIMIQIE-CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMS  324 (490)
Q Consensus       246 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~  324 (490)
                      ..... ..+. .....+..++++++|+++++...++.|.+|+..+........... ..+..++++++|+++++..   .
T Consensus        95 ~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~---~  169 (270)
T 1rwi_B           95 GSNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVTDT---D  169 (270)
T ss_dssp             TCSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEEEEG---G
T ss_pred             CCceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEEEEC---C
Confidence            76543 3333 233578999999999988777778899999876554332222221 2378899999999777765   4


Q ss_pred             eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee
Q psy17682        325 ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP  404 (490)
Q Consensus       325 ~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp  404 (490)
                      .+.|.+||......  ..........+..++++++|. |+++...++.|.+|+.......  .. ...+...+.+++++|
T Consensus       170 ~~~i~~~~~~~~~~--~~~~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~~~~~--~~-~~~~~~~p~~i~~~~  243 (270)
T 1rwi_B          170 NNRVVKLEAESNNQ--VVLPFTDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGSTTST--VL-PFTGLNTPLAVAVDS  243 (270)
T ss_dssp             GTEEEEECTTTCCE--EECCCSSCCSEEEEEECTTCC-EEEEETTTSCEEEECTTCSCCE--EC-CCCSCSCEEEEEECT
T ss_pred             CCEEEEEecCCCce--EeecccCCCCceEEEECCCCC-EEEEECCCCcEEEEcCCCCcce--ee-ccCCCCCceeEEECC
Confidence            67899999876431  111122235678999999995 4477777889999998765421  11 112224689999999


Q ss_pred             CceeEEeecc--eeEEEEecC
Q psy17682        405 KRGCDVNSCE--IGRFFRLNN  423 (490)
Q Consensus       405 ~~~~l~~~~~--~~~~~~~~~  423 (490)
                      +|.+.++...  .++++++..
T Consensus       244 ~g~l~v~~~~~~~v~~~~~~~  264 (270)
T 1rwi_B          244 DRTVYVADRGNDRVVKLTSLE  264 (270)
T ss_dssp             TCCEEEEEGGGTEEEEECCCG
T ss_pred             CCCEEEEECCCCEEEEEcCCC
Confidence            9987777644  455555443

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.58  E-value=1e-12  Score=123.67  Aligned_cols=262  Identities=13%  Similarity=0.058  Sum_probs=158.2

Q ss_pred             ceeeeEEeccCCCceEEee--------eCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         45 RRVGLVLWHPTAQNVLLTA--------GKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        45 ~~V~~v~~~p~~~~~l~s~--------~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      ..+....+  +|..++++.        +.++.|.+||+.++..                ..+            ..+..+
T Consensus        15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~----------------~~l------------~~~~~~   64 (347)
T 2gop_A           15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNAR----------------RFI------------ENATMP   64 (347)
T ss_dssp             CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE----------------EEE------------ESCEEE
T ss_pred             EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCce----------------EEc------------ccCCCe
Confidence            44566666  663333332        2367899999887541                000            136678


Q ss_pred             EeccccccceEEEEEeeC--CCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeC--------
Q psy17682        117 TISEDYVKEFKEEIRKLK--SQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSE--------  186 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~--~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~--------  186 (490)
                      +|||++  +.+.......  ....|.++++.     .++    ...+..+.. +..++|+|+| +.|+.++.        
T Consensus        65 ~~SpDg--~~la~~~~~~~~~~~~l~~~~~~-----~g~----~~~l~~~~~-~~~~~wspdg-~~l~~~~~~~~~~~~~  131 (347)
T 2gop_A           65 RISPDG--KKIAFMRANEEKKVSEIWVADLE-----TLS----SKKILEAKN-IRSLEWNEDS-RKLLIVGFKRREDEDF  131 (347)
T ss_dssp             EECTTS--SEEEEEEEETTTTEEEEEEEETT-----TTE----EEEEEEESE-EEEEEECTTS-SEEEEEEECCCC----
T ss_pred             EECCCC--CEEEEEEeccCCCcceEEEEECC-----CCc----eEEEEcCCC-ccceeECCCC-CEEEEEEccCCCcCCc
Confidence            999995  4444433333  23346677764     222    122223334 9999999998 66666553        


Q ss_pred             -------------------CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC-------cE
Q psy17682        187 -------------------DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN-------NV  240 (490)
Q Consensus       187 -------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-------~v  240 (490)
                                         ...|.+||+.+++.+..+       .. . .+..+.|+|++  +++++..++       ..
T Consensus       132 ~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l-------~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~  200 (347)
T 2gop_A          132 IFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEF-------EK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFW  200 (347)
T ss_dssp             -----CCCC---------CEEEEEEEETTTTEEEEEE-------EE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCE
T ss_pred             EEEcccceeecCcccccCccceEEEEECCCCeEEeee-------cC-C-CcccccCCCCe--EEEEEecccccccccccc
Confidence                               257899998877542322       12 2 67889999998  677665542       34


Q ss_pred             EEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC--------CeEEEEeCCCCceeeeeeecCCCceeE-EEEeC
Q psy17682        241 AIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD--------KKMRIINPRTGAIEEEAVCHEGSKATR-AIYLK  311 (490)
Q Consensus       241 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~s~  311 (490)
                      .+|.+.+++. ..+..+ ..+..+  +|+|+.|+.++.+        ..|++||  +++.......+.. .+.. +.|+ 
T Consensus       201 ~l~~~d~~~~-~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~-~~~~~~~~s-  272 (347)
T 2gop_A          201 DIYIWEDGKE-EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDR-GVGQAKIKD-  272 (347)
T ss_dssp             EEEEEETTEE-EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCS-EEEEEEEET-
T ss_pred             cEEEeCCCce-EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCc-ccCCccEEc-
Confidence            4544445554 334334 455544  9999988887754        3688888  5554333333333 3665 8899 


Q ss_pred             CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeE-EEEEec
Q psy17682        312 SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVI-RYFEIT  379 (490)
Q Consensus       312 ~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i-~iwd~~  379 (490)
                      ++ +++++.   .++.+++| +.++ ...  ....+...+..++|+|  ..+ ++++.++.. .+|.+.
T Consensus       273 dg-~~~~~~---~~~~~~l~-~~~g-~~~--~~~~~~~~v~~~~~s~--~~~-~~~~~~~~~~~l~~~~  330 (347)
T 2gop_A          273 GK-VYFTLF---EEGSVNLY-IWDG-EIK--PIAKGRHWIMGFDVDE--IVV-YLKETATRLRELFTWD  330 (347)
T ss_dssp             TE-EEEEEE---ETTEEEEE-EESS-SEE--EEECSSSEEEEEEESS--SEE-EEEECSSSCCEEEEES
T ss_pred             Cc-EEEEEe---cCCcEEEE-EcCC-ceE--EEecCCCeEEeeeeeC--cEE-EEEcCCCChHHheEeC
Confidence            88 777776   46788888 7733 222  2223456788999999  555 555556554 777776

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.57  E-value=1.9e-11  Score=112.14  Aligned_cols=238  Identities=12%  Similarity=0.029  Sum_probs=162.9

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEE
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAI  242 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~i  242 (490)
                      .+...+.++++.++| +++++...++.|.+||.. ++. ..+.     ...+...+.++++.+++. ++++...++.|..
T Consensus        12 ~~~~~~~~i~~d~~g-~l~v~~~~~~~v~~~d~~-~~~-~~~~-----~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~   82 (299)
T 2z2n_A           12 NQDTGPYGITVSDKG-KVWITQHKANMISCINLD-GKI-TEYP-----LPTPDAKVMCLTISSDGE-VWFTENAANKIGR   82 (299)
T ss_dssp             SSSCCEEEEEECTTS-CEEEEETTTTEEEEECTT-CCE-EEEE-----CSSTTCCEEEEEECTTSC-EEEEETTTTEEEE
T ss_pred             CcCCCccceEECCCC-CEEEEecCCCcEEEEcCC-CCe-EEec-----CCcccCceeeEEECCCCC-EEEeCCCCCeEEE
Confidence            455689999999988 677766667899999977 443 2221     112446789999999985 7777666788999


Q ss_pred             EECCCCeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEe
Q psy17682        243 WNVGTGEIMIQIE--CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       243 wd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~  320 (490)
                      ||.. ++. ..+.  .....+.++++.++++++++...++.|..||. +++............+..++++++|+++++..
T Consensus        83 ~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~  159 (299)
T 2z2n_A           83 ITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTEN  159 (299)
T ss_dssp             ECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEET
T ss_pred             ECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeC
Confidence            9986 432 3332  24567899999999988887777889999998 55543322221233488999999998887765


Q ss_pred             CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeE
Q psy17682        321 SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGI  400 (490)
Q Consensus       321 ~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~  400 (490)
                         ..+.|..||. ++. ............+..++++++|+.. ++...++.|.+||. +++ +. ..........+.++
T Consensus       160 ---~~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~~~~g~l~-v~~~~~~~i~~~~~-~g~-~~-~~~~~~~~~~~~~i  230 (299)
T 2z2n_A          160 ---QNNAIGRITE-SGD-ITEFKIPTPASGPVGITKGNDDALW-FVEIIGNKIGRITT-SGE-IT-EFKIPTPNARPHAI  230 (299)
T ss_dssp             ---TTTEEEEECT-TCC-EEEEECSSTTCCEEEEEECTTSSEE-EEETTTTEEEEECT-TCC-EE-EEECSSTTCCEEEE
T ss_pred             ---CCCEEEEEcC-CCc-EEEeeCCCCCCcceeEEECCCCCEE-EEccCCceEEEECC-CCc-EE-EEECCCCCCCceeE
Confidence               4578999998 433 1222122233457889999998855 66666789999998 654 22 22111233568899


Q ss_pred             EEeeCceeEEeec--ceeEEEEe
Q psy17682        401 GMMPKRGCDVNSC--EIGRFFRL  421 (490)
Q Consensus       401 ~~sp~~~~l~~~~--~~~~~~~~  421 (490)
                      +++++|.+.++..  +.+..|+.
T Consensus       231 ~~~~~g~l~v~~~~~~~i~~~d~  253 (299)
T 2z2n_A          231 TAGAGIDLWFTEWGANKIGRLTS  253 (299)
T ss_dssp             EECSTTCEEEEETTTTEEEEEET
T ss_pred             EECCCCCEEEeccCCceEEEECC
Confidence            9999998777753  34555555

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.57  E-value=7e-11  Score=108.44  Aligned_cols=234  Identities=9%  Similarity=0.004  Sum_probs=157.8

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEEC
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNV  245 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~  245 (490)
                      ..+.++++.++| +++++...++.|..||.. ++. ..+.     .......+.++++.+++. ++++...++.|..+|.
T Consensus        62 ~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~-g~~-~~~~-----~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~  132 (300)
T 2qc5_A           62 AKVMCLIVSSLG-DIWFTENGANKIGKLSKK-GGF-TEYP-----LPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTA  132 (300)
T ss_dssp             CCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCE-EEEE-----CSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECT
T ss_pred             CcceeEEECCCC-CEEEEecCCCeEEEECCC-CCe-EEec-----CCCCCCCCccceECCCCC-EEEEccCCCeEEEECC
Confidence            467889999987 677776667889999976 543 2221     122346689999999885 7777666789999998


Q ss_pred             CCCeeEEE-EecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeee-cCCCceeEEEEeCCCcEEEEEeCCC
Q psy17682        246 GTGEIMIQ-IECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVC-HEGSKATRAIYLKSGLIFTTGFSKM  323 (490)
Q Consensus       246 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~~~~~~  323 (490)
                      . ++.... +......+..+++.++++++++...++.|..+|. +++... +.. .....+..++++++|.++++..   
T Consensus       133 ~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~---  206 (300)
T 2qc5_A          133 D-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEI---  206 (300)
T ss_dssp             T-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEET---
T ss_pred             C-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEcc---
Confidence            7 554422 2334567899999999997776666789999998 555443 321 2223488999999998877664   


Q ss_pred             ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEe
Q psy17682        324 SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMM  403 (490)
Q Consensus       324 ~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~s  403 (490)
                      ..+.|.+++.. +. ............+..++++++|+.. ++...++.|..|+. +++ +. ..........+.+++++
T Consensus       207 ~~~~i~~~~~~-g~-~~~~~~~~~~~~~~~i~~d~~g~l~-v~~~~~~~i~~~~~-~g~-~~-~~~~~~~~~~~~~i~~~  280 (300)
T 2qc5_A          207 MGNKIGRITTT-GE-ISEYDIPTPNARPHAITAGKNSEIW-FTEWGANQIGRITN-DNT-IQ-EYQLQTENAEPHGITFG  280 (300)
T ss_dssp             TTTEEEEECTT-CC-EEEEECSSTTCCEEEEEECSTTCEE-EEETTTTEEEEECT-TSC-EE-EEECCSTTCCCCCEEEC
T ss_pred             CCCEEEEEcCC-Cc-EEEEECCCCCCCceEEEECCCCCEE-EeccCCCeEEEECC-CCc-EE-EEECCccCCccceeEeC
Confidence            35678999883 22 1222122234557899999999854 66666789999998 443 22 12111123567899999


Q ss_pred             eCceeEEeecceeEEEEec
Q psy17682        404 PKRGCDVNSCEIGRFFRLN  422 (490)
Q Consensus       404 p~~~~l~~~~~~~~~~~~~  422 (490)
                      ++|.+.++.. . +++.++
T Consensus       281 ~~g~l~v~~~-~-~i~~~~  297 (300)
T 2qc5_A          281 KDGSVWFALK-C-KIGKLN  297 (300)
T ss_dssp             TTSCEEEECS-S-EEEEEE
T ss_pred             CCCCEEEEcc-C-ceEEeC
Confidence            9998777665 3 665543

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.54  E-value=4.1e-12  Score=115.17  Aligned_cols=183  Identities=13%  Similarity=0.068  Sum_probs=134.0

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC-CCcEEEEE
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS-DNNVAIWN  244 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-dg~v~iwd  244 (490)
                      ..+.++.++|+| ++++  +.++.|..||. +++.+..+..      .....+.++.+.++|. ++++.+. ++.|..+|
T Consensus        37 ~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G~~~W~~~~------~~~~~~~~~~~~~dG~-~lv~~~~~~~~v~~vd  105 (276)
T 3no2_A           37 WECNSVAATKAG-EILF--SYSKGAKMITR-DGRELWNIAA------PAGCEMQTARILPDGN-ALVAWCGHPSTILEVN  105 (276)
T ss_dssp             CCCCEEEECTTS-CEEE--ECBSEEEEECT-TSCEEEEEEC------CTTCEEEEEEECTTSC-EEEEEESTTEEEEEEC
T ss_pred             CCCcCeEECCCC-CEEE--eCCCCEEEECC-CCCEEEEEcC------CCCccccccEECCCCC-EEEEecCCCCEEEEEe
Confidence            357788999988 7777  35778999998 7887776543      1234678899999995 7777776 77888888


Q ss_pred             CCCCeeEEEEecC------CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEE
Q psy17682        245 VGTGEIMIQIECH------PDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTT  318 (490)
Q Consensus       245 ~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~  318 (490)
                      . +++.+.++...      ......++..++|+++++...++.|..||.. ++.+.++....  .+..+...++|.++++
T Consensus       106 ~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~--~~~~~~~~~~g~~~v~  181 (276)
T 3no2_A          106 M-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSG--TPFSSAFLDNGDCLVA  181 (276)
T ss_dssp             T-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSS--CCCEEEECTTSCEEEE
T ss_pred             C-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCC--CccceeEcCCCCEEEE
Confidence            6 78877776521      1234456788999999999999999999998 99888887543  2566788899999988


Q ss_pred             EeCCCceeEEEEecCCCCCCCeEEEecc----CCCceeeeeecCCCCeEEEEe
Q psy17682        319 GFSKMSERQYSLRAPDHLDEPIVMVELD----TSNGVMFPLYDPDTNLVYLCG  367 (490)
Q Consensus       319 ~~~~~~~~~i~iwd~~~~~~~~~~~~~~----~~~~i~~~~~s~~~~~l~~~g  367 (490)
                      +.   .++.|..+|..+++....+....    ....+..+...++|+.+ ++.
T Consensus       182 ~~---~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~-v~~  230 (276)
T 3no2_A          182 CG---DAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLY-ICN  230 (276)
T ss_dssp             CB---TTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEE-EEE
T ss_pred             eC---CCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEE-EEe
Confidence            87   45689999999776443333211    11226777888888887 444

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.50  E-value=8e-12  Score=130.09  Aligned_cols=245  Identities=12%  Similarity=0.001  Sum_probs=152.8

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCC-----CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSED-----CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      +|...+..++||||| ++|+.++.+     ..|++||+.+++.+...      .  +...+..++|+|+ + .|+.++.+
T Consensus       160 ~~~~~~~~~~~SPDG-~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~------~--~~~~~~~~~wspD-~-~l~~~~~~  228 (741)
T 1yr2_A          160 DGATALDAWAASDDG-RLLAYSVQDGGSDWRTVKFVGVADGKPLADE------L--KWVKFSGLAWLGN-D-ALLYSRFA  228 (741)
T ss_dssp             ---EEEEEEEECTTS-SEEEEEEEETTCSEEEEEEEETTTCCEEEEE------E--EEEESCCCEESTT-S-EEEEEECC
T ss_pred             CCCEEEEeEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCCCcc------C--CCceeccEEEECC-C-EEEEEEec
Confidence            454578899999999 666665433     35999999988764320      0  1222357899999 6 56665555


Q ss_pred             Cc--------------EEEEECCCCee--EEEEe--cCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCC--ce
Q psy17682        238 NN--------------VAIWNVGTGEI--MIQIE--CHPDIVYSASWNWDGSKLLTTCKDK-----KMRIINPRTG--AI  292 (490)
Q Consensus       238 g~--------------v~iwd~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~--~~  292 (490)
                      +.              |++|++.+++.  ...+.  .+...+..+.|+|||++|+..+.++     .|++||+.++  +.
T Consensus       229 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~  308 (741)
T 1yr2_A          229 EPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGP  308 (741)
T ss_dssp             CC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECC
T ss_pred             CcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcc
Confidence            43              89999977652  22333  2334588999999999988877544     8999999877  31


Q ss_pred             eeeeeecCCCceeEEEEeCCCcEEEEEeCCC-ceeEEEEecCCCCC-CCeEEEeccCCCceeeeeecCCCCeEEEEecCC
Q psy17682        293 EEEAVCHEGSKATRAIYLKSGLIFTTGFSKM-SERQYSLRAPDHLD-EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD  370 (490)
Q Consensus       293 ~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~-~~~~i~iwd~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d  370 (490)
                      ...+..+... .... ++|+|..|+..+... ..+.|.+||+.+.. ....+. ..+...+..+.++  +..++++...|
T Consensus       309 ~~~l~~~~~~-~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~~~~~l~~~~~~--~~~lv~~~~~d  383 (741)
T 1yr2_A          309 VTALIPDLKA-QWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PESKDNLESVGIA--GNRLFASYIHD  383 (741)
T ss_dssp             CEEEECSSSS-CEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CCCSSEEEEEEEE--BTEEEEEEEET
T ss_pred             cEEecCCCCc-eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cCCCCeEEEEEEE--CCEEEEEEEEC
Confidence            4445444443 3333 358888777666432 36779999987642 212222 2233345566776  45566888889


Q ss_pred             CeEEEEEec-CCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-c-----ceeEEEEecCCC
Q psy17682        371 SVIRYFEIT-AEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-C-----EIGRFFRLNNSG  425 (490)
Q Consensus       371 g~i~iwd~~-~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~-----~~~~~~~~~~~~  425 (490)
                      +..+||.+. +++ ..+.+. +.....+..++++|++..++.. .     ..+.+|++.+++
T Consensus       384 g~~~l~~~~~~g~-~~~~l~-~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  443 (741)
T 1yr2_A          384 AKSQVLAFDLDGK-PAGAVS-LPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK  443 (741)
T ss_dssp             TEEEEEEEETTSC-EEEECB-CSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred             CEEEEEEEeCCCC-ceeecc-CCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            988888776 343 222222 2234568899999998654422 1     255666665544

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.50  E-value=1.1e-10  Score=110.51  Aligned_cols=261  Identities=11%  Similarity=0.014  Sum_probs=164.4

Q ss_pred             eEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe----------CCCcEEEEECCCCCcccccccc
Q psy17682        138 ALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS----------EDCVVKVWQIPDGGISRTLTEP  207 (490)
Q Consensus       138 ~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~  207 (490)
                      .+.+++..     +++.   +..+.....+  .++++|+| ++++.+.          .++.|.+||..+.+.+..+..+
T Consensus        48 ~v~v~D~~-----t~~~---~~~i~~g~~p--~i~~spDg-~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~  116 (373)
T 2mad_H           48 QQWVLDAG-----SGSI---LGHVNGGFLP--NPVAAHSG-SEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELP  116 (373)
T ss_pred             EEEEEECC-----CCeE---EEEecCCCCC--CeEECCCC-CEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECC
Confidence            77888874     2222   2233322333  99999999 6666664          3678999999888776654321


Q ss_pred             -eeeecccccCEEEEEEeeCCCCEEEEEeC--CCcEEEEECCCCeeEEE-EecCCCcEEEEEEcCCC-CEEEEEeCCCeE
Q psy17682        208 -VVDLLYHQRRVGLVLWHPTAQNVLLTAGS--DNNVAIWNVGTGEIMIQ-IECHPDIVYSASWNWDG-SKLLTTCKDKKM  282 (490)
Q Consensus       208 -~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--dg~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i  282 (490)
                       ..... +......+.|+|+|+ +|+++..  ++.|.++| .+++.+.. +.. ..   ++.+.|++ +.+++.+.||.+
T Consensus       117 ~~~~~~-~g~~p~~~~~spDG~-~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~  189 (373)
T 2mad_H          117 DAPRFD-VGPYSWMNANTPNNA-DLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGL  189 (373)
T ss_pred             Cccccc-cCCCccceEECCCCC-EEEEEecCCCCeEEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCE
Confidence             00000 112346899999997 6666553  57899999 99998877 652 22   24455655 466677789999


Q ss_pred             EEEeCCCCceeeeee-----ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc-----------
Q psy17682        283 RIINPRTGAIEEEAV-----CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD-----------  346 (490)
Q Consensus       283 ~iwd~~~~~~~~~~~-----~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~-----------  346 (490)
                      .++|. +++......     ...........+.+++..++..+   ..+.+.+.|+....... ...+.           
T Consensus       190 ~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~v~vid~~~~~~~v-~~~~~~~~~~~~~~~~  264 (373)
T 2mad_H          190 AKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV---YSGKILQADISAAGATN-KAPIDALSGGRKADTW  264 (373)
T ss_pred             EEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEc---CCceEEEEeccCCcceE-eeeeeecCCcccccce
Confidence            99999 877663322     11111123345666644333333   35688888886543211 11111           


Q ss_pred             CCCceeeeeecCCCCeEEEEec---------CCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce-eEEee---c
Q psy17682        347 TSNGVMFPLYDPDTNLVYLCGK---------GDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG-CDVNS---C  413 (490)
Q Consensus       347 ~~~~i~~~~~s~~~~~l~~~g~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~---~  413 (490)
                      ...+...+.++|+++.+|++..         .++.|.++|+.+.+    .+..+..+....+++|+|||+ +++++   +
T Consensus       265 ~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~----vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~  340 (373)
T 2mad_H          265 RPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ----TSSQISLGHDVDAISVAQDGGPDLYALSAGT  340 (373)
T ss_pred             ecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE----EEEEEECCCCcCeEEECCCCCeEEEEEcCCC
Confidence            1123445789999999977653         24689999999886    444445555789999999998 55554   3


Q ss_pred             ceeEEEEecCCC
Q psy17682        414 EIGRFFRLNNSG  425 (490)
Q Consensus       414 ~~~~~~~~~~~~  425 (490)
                      +.+.++++.+.+
T Consensus       341 ~~V~ViD~~t~~  352 (373)
T 2mad_H          341 EVLHIYDAGAGD  352 (373)
T ss_pred             CeEEEEECCCCC
Confidence            477888888776

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.49  E-value=1.8e-11  Score=117.67  Aligned_cols=237  Identities=13%  Similarity=0.028  Sum_probs=155.9

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC--cEEEE
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN--NVAIW  243 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg--~v~iw  243 (490)
                      .....|+|+|++ +++++...++.|++||..++.......        ...... ++|+|++. .|+++..++  .|.++
T Consensus       131 ~~P~~la~d~~g-~lyv~d~~~~~I~~id~~~g~~~~~~~--------~~~~~~-ia~~~~g~-~l~~~d~~~~~~I~~~  199 (409)
T 3hrp_A          131 KYMWGIAAVGNN-TVLAYQRDDPRVRLISVDDNKVTTVHP--------GFKGGK-PAVTKDKQ-RVYSIGWEGTHTVYVY  199 (409)
T ss_dssp             CCEEEEEECSTT-EEEEEETTTTEEEEEETTTTEEEEEEE--------TCCBCB-CEECTTSS-EEEEEBSSTTCEEEEE
T ss_pred             CCceEEEEeCCC-CEEEEecCCCcEEEEECCCCEEEEeec--------cCCCCc-eeEecCCC-cEEEEecCCCceEEEE
Confidence            468899999988 677777778999999987765433211        122233 89999996 777777755  78889


Q ss_pred             ECCCCeeEEEE----ecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee----eeecCCCcee-EEEEeCC-C
Q psy17682        244 NVGTGEIMIQI----ECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEE----AVCHEGSKAT-RAIYLKS-G  313 (490)
Q Consensus       244 d~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~~~~~~~-~~~~s~~-~  313 (490)
                      +...+.....+    ......+.+++++|++..|+.+..++.|+.||..++.....    ..+....... .++|+|+ +
T Consensus       200 d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g  279 (409)
T 3hrp_A          200 MKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDS  279 (409)
T ss_dssp             EGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTT
T ss_pred             EcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCC
Confidence            88765543344    21456678999999555555577788999999987763322    1122222123 8999995 6


Q ss_pred             cEEEEEeCCCceeEEEEecCCCCCCCeEEEecc-------------CCCceeeeeecCCCCeEEEEec-CCCeEEEEEec
Q psy17682        314 LIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD-------------TSNGVMFPLYDPDTNLVYLCGK-GDSVIRYFEIT  379 (490)
Q Consensus       314 ~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~-------------~~~~i~~~~~s~~~~~l~~~g~-~dg~i~iwd~~  379 (490)
                      .++++..   ..+.|+.|+....  ...+....             .-.....++++|+|+ |+++-+ .++.|+.|++.
T Consensus       280 ~lyv~d~---~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~  353 (409)
T 3hrp_A          280 NFYMSDQ---NLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDIL  353 (409)
T ss_dssp             EEEEEET---TTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETT
T ss_pred             EEEEEeC---CCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECC
Confidence            6666554   5678999987743  11111111             013467899999998 557777 88999999987


Q ss_pred             CCCCeeEEeeeee-------------CCCceeeEEEeeCceeEEeecceeEEEEe
Q psy17682        380 AEPPFVHYINTFQ-------------TPDPQRGIGMMPKRGCDVNSCEIGRFFRL  421 (490)
Q Consensus       380 ~~~~~~~~~~~~~-------------~~~~i~~~~~sp~~~~l~~~~~~~~~~~~  421 (490)
                      ++. +. .+....             .-....+++++|++.+.++.....++.++
T Consensus       354 ~G~-v~-~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i  406 (409)
T 3hrp_A          354 DGY-VS-TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKY  406 (409)
T ss_dssp             TTE-EE-EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred             CCE-EE-EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence            764 22 221110             01347899999999888877654455443

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.49  E-value=2.6e-11  Score=112.32  Aligned_cols=246  Identities=10%  Similarity=0.041  Sum_probs=156.3

Q ss_pred             eecccCCeeEEEECCCCCCEEEE-------EeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC-CCCEEE
Q psy17682        161 VGGHKGPVLDIAWSPHDDNVIAS-------GSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT-AQNVLL  232 (490)
Q Consensus       161 ~~~h~~~V~~~~~~p~~~~~l~s-------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~  232 (490)
                      +...-....+++|++++ .++++       +..++.|.+||..+++... +..+  ...++...+.+++++++ +. +++
T Consensus        13 ~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~--~~~~~~~~~~~i~~~~~~g~-l~v   87 (314)
T 1pjx_A           13 VTEDIPGAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-ICKP--EVNGYGGIPAGCQCDRDANQ-LFV   87 (314)
T ss_dssp             EECCCTTCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEE-EECC--EETTEECCEEEEEECSSSSE-EEE
T ss_pred             hhccCCCccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEEE-EEec--ccCCCCCCCceEEEecCCCc-EEE
Confidence            34444567899999887 67777       5678899999987776432 1111  01224567899999999 63 444


Q ss_pred             EEeCCCcEEEEECCCCeeEEE-Eec----CCCcEEEEEEcCCCCEEEEEeCC---------------CeEEEEeCCCCce
Q psy17682        233 TAGSDNNVAIWNVGTGEIMIQ-IEC----HPDIVYSASWNWDGSKLLTTCKD---------------KKMRIINPRTGAI  292 (490)
Q Consensus       233 s~~~dg~v~iwd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~iwd~~~~~~  292 (490)
                      + +..+.|.+||.. ++.... ...    ....+.+++++++|+++++...+               +.|..||.. ++.
T Consensus        88 ~-~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~  164 (314)
T 1pjx_A           88 A-DMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM  164 (314)
T ss_dssp             E-ETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE
T ss_pred             E-ECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE
Confidence            4 444579999988 665432 221    12347899999999888777655               578888876 554


Q ss_pred             eeeeeecCCCceeEEEEe----CCCcEEEEEeCCCceeEEEEecCC-CCCC--CeEEEeccCC--CceeeeeecCCCCeE
Q psy17682        293 EEEAVCHEGSKATRAIYL----KSGLIFTTGFSKMSERQYSLRAPD-HLDE--PIVMVELDTS--NGVMFPLYDPDTNLV  363 (490)
Q Consensus       293 ~~~~~~~~~~~~~~~~~s----~~~~~l~~~~~~~~~~~i~iwd~~-~~~~--~~~~~~~~~~--~~i~~~~~s~~~~~l  363 (490)
                      ..... +.. ....++++    ++++.+.++..  .++.|.+||.. .+..  ..........  .....++++++|+.+
T Consensus       165 ~~~~~-~~~-~~~~i~~~~~~d~dg~~l~v~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~  240 (314)
T 1pjx_A          165 IQVDT-AFQ-FPNGIAVRHMNDGRPYQLIVAET--PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLL  240 (314)
T ss_dssp             EEEEE-EES-SEEEEEEEECTTSCEEEEEEEET--TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEE
T ss_pred             EEecc-CCC-CcceEEEecccCCCCCEEEEEEC--CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEE
Confidence            33222 222 26788999    99975544431  36789999876 2211  0111222222  457789999999776


Q ss_pred             EEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce-eEEeecc--eeEEEEec
Q psy17682        364 YLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG-CDVNSCE--IGRFFRLN  422 (490)
Q Consensus       364 ~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~--~~~~~~~~  422 (490)
                       ++...++.|.+||..+++.. ..+.  .....+.+++|+|++. +.++...  .+..|++.
T Consensus       241 -v~~~~~~~i~~~d~~~g~~~-~~~~--~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~  298 (314)
T 1pjx_A          241 -VANWGSSHIEVFGPDGGQPK-MRIR--CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             -EEEETTTEEEEECTTCBSCS-EEEE--CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred             -EEEcCCCEEEEEcCCCCcEe-EEEe--CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence             66666889999998866522 2221  1225789999999998 4455544  34444443

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.48  E-value=1.1e-11  Score=115.98  Aligned_cols=272  Identities=12%  Similarity=0.073  Sum_probs=172.3

Q ss_pred             CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe----------CCCcEEEEECCCCCcccccc
Q psy17682        136 QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS----------EDCVVKVWQIPDGGISRTLT  205 (490)
Q Consensus       136 ~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~  205 (490)
                      ++.+.+++..     +.+   .+..+..-..+  .++++|+| ++++++.          .++.|.+||..+++.+..+.
T Consensus        58 ~~~V~ViD~~-----t~~---v~~~I~vG~~P--~va~spDG-~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~  126 (386)
T 3sjl_D           58 VTQQFVIDGE-----AGR---VIGMIDGGFLP--NPVVADDG-SFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIE  126 (386)
T ss_dssp             SEEEEEEETT-----TTE---EEEEEEECSSC--EEEECTTS-SCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEE
T ss_pred             CCEEEEEECC-----CCe---EEEEEECCCCC--cEEECCCC-CEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEE
Confidence            6789999884     222   22333333344  49999999 5554443          36789999999988777654


Q ss_pred             cceeeecccccCEEEEEEeeCCCCEEEEEeC--CCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEE
Q psy17682        206 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS--DNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMR  283 (490)
Q Consensus       206 ~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  283 (490)
                      .+...-.........+.++|+|+ +++++..  ++.|.++|+.+++.+.++... + + ...+....+.+++.+.||++.
T Consensus       127 v~~g~r~~~g~~P~~~a~spDGk-~lyVan~~~~~~VsVID~~t~~vv~tI~v~-g-~-~~~~P~g~~~~~~~~~DG~~~  202 (386)
T 3sjl_D          127 LPDAPRFLVGTYPWMTSLTPDGK-TLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-D-C-YHIFPTAPDTFFMHCRDGSLA  202 (386)
T ss_dssp             ETTCCCCCBSCCGGGEEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEEECC-S-E-EEEEEEETTEEEEEETTSCEE
T ss_pred             CCCccccccCCCCceEEEcCCCC-EEEEEEcCCCCeEEEEECCCCcEEEEEECC-C-c-ceeecCCCceeEEECCCCCEE
Confidence            21100000112456789999997 5665543  689999999999999988632 2 2 223333446777888999999


Q ss_pred             EEeCCC-CceeeeeeecC----CCceeEEEEe-CCCcEEEEEeCCCceeEEEEecCCCCCCCe--EEEecc--------C
Q psy17682        284 IINPRT-GAIEEEAVCHE----GSKATRAIYL-KSGLIFTTGFSKMSERQYSLRAPDHLDEPI--VMVELD--------T  347 (490)
Q Consensus       284 iwd~~~-~~~~~~~~~~~----~~~~~~~~~s-~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~--~~~~~~--------~  347 (490)
                      +.++.+ ++...+.....    ........|. ++|+++.+..    ++.+++.|+.......  ....+.        .
T Consensus       203 ~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~----~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~  278 (386)
T 3sjl_D          203 KVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY----TGKIHQIDLSSGDAKFLPAVEALTEAERADGWR  278 (386)
T ss_dssp             EEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBT----TSEEEEEECTTSSCEECCCEESSCHHHHHTTEE
T ss_pred             EEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeC----CCEEEEEECCCCcceeecceecccccccccccc
Confidence            999976 55432221111    1111224554 6887766553    6789999987643211  111000        1


Q ss_pred             CCceeeeeecCCCCeEEEEecC---------CCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce-eEEee---cc
Q psy17682        348 SNGVMFPLYDPDTNLVYLCGKG---------DSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG-CDVNS---CE  414 (490)
Q Consensus       348 ~~~i~~~~~s~~~~~l~~~g~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~---~~  414 (490)
                      ..+...++++++++.+|++-..         .+.|.+.|+.+.+    .+..+..+..+.+++++||++ .++++   ++
T Consensus       279 p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k----v~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~  354 (386)
T 3sjl_D          279 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE----RLAKFEMGHEIDSINVSQDEKPLLYALSTGDK  354 (386)
T ss_dssp             ECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC----EEEEEEEEEEECEEEECSSSSCEEEEEETTTT
T ss_pred             CCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe----EEEEEECCCCcceEEECCCCCeEEEEEcCCCC
Confidence            1234567889999999876431         3579999999988    344444445789999999986 54443   45


Q ss_pred             eeEEEEecCCCceEEE
Q psy17682        415 IGRFFRLNNSGLCQVV  430 (490)
Q Consensus       415 ~~~~~~~~~~~~~~~i  430 (490)
                      .+.+++..+++.+..+
T Consensus       355 ~VsViD~~t~k~~~~i  370 (386)
T 3sjl_D          355 TLYIHDAESGEELRSV  370 (386)
T ss_dssp             EEEEEETTTCCEEEEE
T ss_pred             eEEEEECCCCcEEEEe
Confidence            7889999888755444

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.48  E-value=1.1e-11  Score=129.06  Aligned_cols=183  Identities=11%  Similarity=0.023  Sum_probs=112.8

Q ss_pred             cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC-----CcEEEEECCCC--eeEEEEecCCCcE
Q psy17682        189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-----NNVAIWNVGTG--EIMIQIECHPDIV  261 (490)
Q Consensus       189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~v~iwd~~~~--~~~~~~~~~~~~v  261 (490)
                      .|++|++.++.....+   +.....+...+.++.|+|+|+ .|+..+.+     ..|.+||+.++  +....+..+...+
T Consensus       244 ~v~~~~lgt~~~~~~l---v~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~  319 (741)
T 1yr2_A          244 TVWLHRLGTPQSADQP---VFATPELPKRGHGASVSSDGR-WVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ  319 (741)
T ss_dssp             EEEEEETTSCGGGCEE---EECCTTCTTCEEEEEECTTSC-EEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSC
T ss_pred             EEEEEECCCCchhCEE---EeccCCCCeEEEEEEECCCCC-EEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCce
Confidence            4889998766432111   111122334588999999997 55555543     38999999877  3145555455555


Q ss_pred             EEEEEcCCCCEEEEEeCC----CeEEEEeCCCCc-eeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeE--EEEecCC
Q psy17682        262 YSASWNWDGSKLLTTCKD----KKMRIINPRTGA-IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQ--YSLRAPD  334 (490)
Q Consensus       262 ~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~--i~iwd~~  334 (490)
                      .... +|+|+.|+..+.+    +.|.+||+.++. ....+..+....+..+.++ ++.++++..   .++.  |.++++.
T Consensus       320 ~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~---~dg~~~l~~~~~~  394 (741)
T 1yr2_A          320 WDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYI---HDAKSQVLAFDLD  394 (741)
T ss_dssp             EEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEE---ETTEEEEEEEETT
T ss_pred             EEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEE---ECCEEEEEEEeCC
Confidence            5553 4889888887753    459999998752 3334433333346667777 566677666   3444  4445543


Q ss_pred             CCCCCeEEEeccCCCceeeeeecCCCCeEEEEec---CCCeEEEEEecCCC
Q psy17682        335 HLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK---GDSVIRYFEITAEP  382 (490)
Q Consensus       335 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~---~dg~i~iwd~~~~~  382 (490)
                      . .. ......+....+..+.++|+++.++++.+   ..+.|++||+.+++
T Consensus       395 g-~~-~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  443 (741)
T 1yr2_A          395 G-KP-AGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK  443 (741)
T ss_dssp             S-CE-EEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred             C-Cc-eeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            2 21 11122223456888999999987755443   45789999998775

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.48  E-value=2e-11  Score=113.01  Aligned_cols=252  Identities=8%  Similarity=0.040  Sum_probs=158.9

Q ss_pred             ecccccceeeeEEeccCCCceEEe-------eeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccc
Q psy17682         39 DLLYHQRRVGLVLWHPTAQNVLLT-------AGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNS  111 (490)
Q Consensus        39 ~l~gH~~~V~~v~~~p~~~~~l~s-------~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (490)
                      .+.+.-....+++|++++ .++++       +..++.|.+||..++....                ... .  .......
T Consensus        12 ~~~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~----------------~~~-~--~~~~~~~   71 (314)
T 1pjx_A           12 KVTEDIPGAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTV----------------ICK-P--EVNGYGG   71 (314)
T ss_dssp             EEECCCTTCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEE----------------EEC-C--EETTEEC
T ss_pred             hhhccCCCccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEEE----------------EEe-c--ccCCCCC
Confidence            345555677899999888 77777       6778999999987765211                000 0  0000112


Q ss_pred             cCCeeEeccc-cccceEEEEEeeCCCceEEEECCCCCCCCcccCCCC-cceee-cccCCeeEEEECCCCCCEEEEEeCC-
Q psy17682        112 TANEITISED-YVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINAD-HALVG-GHKGPVLDIAWSPHDDNVIASGSED-  187 (490)
Q Consensus       112 ~v~~~~~s~~-~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~-~~~~~-~h~~~V~~~~~~p~~~~~l~s~~~d-  187 (490)
                      .+..++++++ .      .+..+...+.+.+|+..      ++.... ..... .+...+.+++++|+| +++++...+ 
T Consensus        72 ~~~~i~~~~~~g------~l~v~~~~~~l~~~d~~------g~~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~  138 (314)
T 1pjx_A           72 IPAGCQCDRDAN------QLFVADMRLGLLVVQTD------GTFEEIAKKDSEGRRMQGCNDCAFDYEG-NLWITAPAGE  138 (314)
T ss_dssp             CEEEEEECSSSS------EEEEEETTTEEEEEETT------SCEEECCSBCTTSCBCBCCCEEEECTTS-CEEEEECBCB
T ss_pred             CCceEEEecCCC------cEEEEECCCCEEEEeCC------CCEEEEEeccCCCccccCCcCEEECCCC-CEEEEecCcc
Confidence            4567888877 4      22333334467788763      211100 00001 123468899999988 676666544 


Q ss_pred             --------------CcEEEEECCCCCcccccccceeeecccccCEEEEEEe----eCCCCEEEEEeCCCcEEEEECC-CC
Q psy17682        188 --------------CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWH----PTAQNVLLTAGSDNNVAIWNVG-TG  248 (490)
Q Consensus       188 --------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----p~~~~~l~s~~~dg~v~iwd~~-~~  248 (490)
                                    +.|..|+.. ++...        +..+......++|+    |+++.++++...++.|.+||+. ++
T Consensus       139 ~~~~~~~~~~~~~~~~l~~~~~~-g~~~~--------~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g  209 (314)
T 1pjx_A          139 VAPADYTRSMQEKFGSIYCFTTD-GQMIQ--------VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPA  209 (314)
T ss_dssp             CTTSCCCBTTSSSCEEEEEECTT-SCEEE--------EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETT
T ss_pred             cccccccccccCCCCeEEEECCC-CCEEE--------eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCC
Confidence                          456666654 33221        11133456889999    9985345555567899999986 44


Q ss_pred             e-----eEEEEecCC-CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCC
Q psy17682        249 E-----IMIQIECHP-DIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSK  322 (490)
Q Consensus       249 ~-----~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~  322 (490)
                      +     ....+..+. ..+..++++++|+++++...++.|.+||..+++....+..+.. .+.+++++++|+.|.+++. 
T Consensus       210 ~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~-~~~~i~~~~dg~~l~v~~~-  287 (314)
T 1pjx_A          210 KIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFE-KPSNLHFKPQTKTIFVTEH-  287 (314)
T ss_dssp             EEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSS-CEEEEEECTTSSEEEEEET-
T ss_pred             ccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCC-CceeEEECCCCCEEEEEeC-
Confidence            4     222233333 5688999999999888887889999999987777666665543 4899999999985554442 


Q ss_pred             CceeEEEEecCCC
Q psy17682        323 MSERQYSLRAPDH  335 (490)
Q Consensus       323 ~~~~~i~iwd~~~  335 (490)
                       .++.|..+++..
T Consensus       288 -~~~~l~~~~~~~  299 (314)
T 1pjx_A          288 -ENNAVWKFEWQR  299 (314)
T ss_dssp             -TTTEEEEEECSS
T ss_pred             -CCCeEEEEeCCC
Confidence             346788888764

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.45  E-value=3.2e-10  Score=106.05  Aligned_cols=303  Identities=13%  Similarity=0.087  Sum_probs=186.7

Q ss_pred             EEeccCCCceEEeeeC----CCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccc
Q psy17682         50 VLWHPTAQNVLLTAGK----EAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKE  125 (490)
Q Consensus        50 v~~~p~~~~~l~s~~~----D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~  125 (490)
                      ....|++..++++-..    ++.|.+.|..+++.                  ...+.. +   .  .- .+++||++..-
T Consensus        38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v------------------~~~I~v-G---~--~P-~va~spDG~~l   92 (386)
T 3sjl_D           38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRV------------------IGMIDG-G---F--LP-NPVVADDGSFI   92 (386)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEE------------------EEEEEE-C---S--SC-EEEECTTSSCE
T ss_pred             eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeE------------------EEEEEC-C---C--CC-cEEECCCCCEE
Confidence            4456888556665544    78999999988651                  111111 0   0  11 38999997443


Q ss_pred             eEEEEEe-----eCCCceEEEECCCCCCCCcccCCCCcceee-cc------cCCeeEEEECCCCCCEEEEEeC--CCcEE
Q psy17682        126 FKEEIRK-----LKSQQALSILPPPSTAPNTGRINADHALVG-GH------KGPVLDIAWSPHDDNVIASGSE--DCVVK  191 (490)
Q Consensus       126 ~~~~~~~-----~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~-~h------~~~V~~~~~~p~~~~~l~s~~~--dg~i~  191 (490)
                      |.+....     +..++.+.+|+..     +.+   ....+. +.      ...-..++|+|+| ++++++..  ++.|.
T Consensus        93 yVan~~~~r~~~G~~~~~VsviD~~-----t~~---v~~~I~v~~g~r~~~g~~P~~~a~spDG-k~lyVan~~~~~~Vs  163 (386)
T 3sjl_D           93 AHASTVFSRIARGERTDYVEVFDPV-----TLL---PTADIELPDAPRFLVGTYPWMTSLTPDG-KTLLFYQFSPAPAVG  163 (386)
T ss_dssp             EEEEEEEEETTEEEEEEEEEEECTT-----TCC---EEEEEEETTCCCCCBSCCGGGEEECTTS-SEEEEEECSSSCEEE
T ss_pred             EEEcccccccccCCCCCEEEEEECC-----CCe---EEEEEECCCccccccCCCCceEEEcCCC-CEEEEEEcCCCCeEE
Confidence            3332111     1245789999985     222   122221 10      1245678999999 66666653  68999


Q ss_pred             EEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC-CeeEEEEecC----CCcEE-EEE
Q psy17682        192 VWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT-GEIMIQIECH----PDIVY-SAS  265 (490)
Q Consensus       192 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~----~~~v~-~~~  265 (490)
                      ++|+.+++.+..+..+     +    +  ....|.+...+++.+.||++.+.++.+ ++.......+    ...+. ...
T Consensus       164 VID~~t~~vv~tI~v~-----g----~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~  232 (386)
T 3sjl_D          164 VVDLEGKAFKRMLDVP-----D----C--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPA  232 (386)
T ss_dssp             EEETTTTEEEEEEECC-----S----E--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCE
T ss_pred             EEECCCCcEEEEEECC-----C----c--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccce
Confidence            9999999887766421     1    1  123355545778888899999999876 5543322111    11221 235


Q ss_pred             Ec-CCCCEEEEEeCCCeEEEEeCCCCc--eeeeee---------ecCCCceeEEEEeCCCcEEEEEeC-------CCcee
Q psy17682        266 WN-WDGSKLLTTCKDKKMRIINPRTGA--IEEEAV---------CHEGSKATRAIYLKSGLIFTTGFS-------KMSER  326 (490)
Q Consensus       266 ~~-~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~---------~~~~~~~~~~~~s~~~~~l~~~~~-------~~~~~  326 (490)
                      |. ++|++++ .+.+|++++.|+.+..  ....+.         +-.......+++++++..+.+...       +....
T Consensus       233 ~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~  311 (386)
T 3sjl_D          233 YSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASR  311 (386)
T ss_dssp             EETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEE
T ss_pred             eEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCC
Confidence            54 5775555 5668999999997664  222221         000011345777998777666531       11246


Q ss_pred             EEEEecCCCCCCCeEEEeccCCCceeeeeecCCCC-eEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeC
Q psy17682        327 QYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTN-LVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPK  405 (490)
Q Consensus       327 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~  405 (490)
                      .|.+.|+.+.+....+   .....+..+++++|++ .||++...++.|.++|..+++    .+........-+.+.+++|
T Consensus       312 ~V~viD~~t~kv~~~i---~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k----~~~~i~~~~~p~~l~~s~d  384 (386)
T 3sjl_D          312 FVVVLDAKTGERLAKF---EMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE----ELRSVNQLGHGPQVITTAD  384 (386)
T ss_dssp             EEEEEETTTCCEEEEE---EEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC----EEEEECCCCSSCCEEEECC
T ss_pred             EEEEEECCCCeEEEEE---ECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc----EEEEecCCCCCceeEECCc
Confidence            8999999987643322   2234688999999997 676666779999999999998    4555555556677888877

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.43  E-value=8.1e-10  Score=101.28  Aligned_cols=238  Identities=9%  Similarity=-0.009  Sum_probs=160.3

Q ss_pred             ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEE
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIW  243 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iw  243 (490)
                      ....+.++++.++| ++.++...++.|.+|+.. ++.. .+.     +..+...+.++++.+++. ++++...++.|..+
T Consensus        18 ~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~-~~~~-~~~-----~~~~~~~~~~i~~~~~g~-l~v~~~~~~~v~~~   88 (300)
T 2qc5_A           18 PDSGPYGITSSEDG-KVWFTQHKANKISSLDQS-GRIK-EFE-----VPTPDAKVMCLIVSSLGD-IWFTENGANKIGKL   88 (300)
T ss_dssp             TTCCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEE-EEE-----CSSTTCCEEEEEECTTSC-EEEEETTTTEEEEE
T ss_pred             CCCCcceeeECCCC-CEEEEcCCCCeEEEECCC-CceE-EEE-----CCCCCCcceeEEECCCCC-EEEEecCCCeEEEE
Confidence            34678899999988 677777678999999976 4432 221     222346789999999985 77766667889999


Q ss_pred             ECCCCeeEE-EEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCC
Q psy17682        244 NVGTGEIMI-QIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSK  322 (490)
Q Consensus       244 d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~  322 (490)
                      |.. ++... .+......+.++++.++++++++...++.|..+|.. ++............+..+++.++|+++++..  
T Consensus        89 d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~--  164 (300)
T 2qc5_A           89 SKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTEN--  164 (300)
T ss_dssp             CTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEET--
T ss_pred             CCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEec--
Confidence            987 55432 222234678999999999988877778899999987 5544221121233488999999999776664  


Q ss_pred             CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEE
Q psy17682        323 MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGM  402 (490)
Q Consensus       323 ~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~  402 (490)
                       ..+.|..+|. .+. ............+..++++++|+.. ++....+.|.+|+. +++ +.. .........+.++++
T Consensus       165 -~~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~d~~g~l~-v~~~~~~~i~~~~~-~g~-~~~-~~~~~~~~~~~~i~~  237 (300)
T 2qc5_A          165 -QNNSIGRITN-TGK-LEEYPLPTNAAAPVGITSGNDGALW-FVEIMGNKIGRITT-TGE-ISE-YDIPTPNARPHAITA  237 (300)
T ss_dssp             -TTTEEEEECT-TCC-EEEEECSSTTCCEEEEEECTTSSEE-EEETTTTEEEEECT-TCC-EEE-EECSSTTCCEEEEEE
T ss_pred             -CCCeEEEECC-CCc-EEEeeCCCCCCCcceEEECCCCCEE-EEccCCCEEEEEcC-CCc-EEE-EECCCCCCCceEEEE
Confidence             3567888988 333 1222211233457889999998765 66666778999998 443 221 111122356789999


Q ss_pred             eeCceeEEeecc--eeEEEEe
Q psy17682        403 MPKRGCDVNSCE--IGRFFRL  421 (490)
Q Consensus       403 sp~~~~l~~~~~--~~~~~~~  421 (490)
                      +++|.+.++...  .+..|+.
T Consensus       238 d~~g~l~v~~~~~~~i~~~~~  258 (300)
T 2qc5_A          238 GKNSEIWFTEWGANQIGRITN  258 (300)
T ss_dssp             CSTTCEEEEETTTTEEEEECT
T ss_pred             CCCCCEEEeccCCCeEEEECC
Confidence            999987777643  4444444

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.43  E-value=1.9e-10  Score=105.59  Aligned_cols=226  Identities=9%  Similarity=-0.017  Sum_probs=147.7

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEE
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAI  242 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~i  242 (490)
                      .+..-..+..|+|+++.++++...++.|..||..+++. ..+.        ....+.++++++++. ++++ . ++.|.+
T Consensus        10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~--------~~~~~~~i~~~~dG~-l~v~-~-~~~l~~   77 (297)
T 3g4e_A           10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT--------MDAPVSSVALRQSGG-YVAT-I-GTKFCA   77 (297)
T ss_dssp             CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE--------CSSCEEEEEEBTTSS-EEEE-E-TTEEEE
T ss_pred             cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe--------CCCceEEEEECCCCC-EEEE-E-CCeEEE
Confidence            34455678899997657888888889999999877654 2211        456789999999996 5544 3 567999


Q ss_pred             EECCCCeeEEEEec----CCCcEEEEEEcCCCCEEEEEeC-----------CCeEEEEeCCCCceeeeeeecCCCceeEE
Q psy17682        243 WNVGTGEIMIQIEC----HPDIVYSASWNWDGSKLLTTCK-----------DKKMRIINPRTGAIEEEAVCHEGSKATRA  307 (490)
Q Consensus       243 wd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  307 (490)
                      ||..+++.......    ....+..++++|+|+++++...           .+.|+.+|.. ++... +..... ....+
T Consensus        78 ~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~-~~~~~~-~pngi  154 (297)
T 3g4e_A           78 LNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKK-YFDQVD-ISNGL  154 (297)
T ss_dssp             EETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEE-EEEEES-BEEEE
T ss_pred             EECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEE-Eeeccc-cccce
Confidence            99988765433221    1235789999999997665432           2345555543 33322 222222 37889


Q ss_pred             EEeCCCcEEEEEeCCCceeEEEEecCC--CCCCC--eEEEecc-CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        308 IYLKSGLIFTTGFSKMSERQYSLRAPD--HLDEP--IVMVELD-TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       308 ~~s~~~~~l~~~~~~~~~~~i~iwd~~--~~~~~--~~~~~~~-~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      +|+|+++.|.....  ..+.|.+|++.  ++...  ..+.... .......++++++|++. ++...++.|.+||..+++
T Consensus       155 ~~spdg~~lyv~~~--~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lw-va~~~~~~v~~~d~~tG~  231 (297)
T 3g4e_A          155 DWSLDHKIFYYIDS--LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLW-VACYNGGRVIRLDPVTGK  231 (297)
T ss_dssp             EECTTSCEEEEEEG--GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEE-EEEETTTEEEEECTTTCC
T ss_pred             EEcCCCCEEEEecC--CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEE-EEEcCCCEEEEEcCCCce
Confidence            99999986654431  46789999874  33210  1112211 22356789999999765 666677889999998887


Q ss_pred             CeeEEeeeeeCC-CceeeEEEe-eCceeEE
Q psy17682        383 PFVHYINTFQTP-DPQRGIGMM-PKRGCDV  410 (490)
Q Consensus       383 ~~~~~~~~~~~~-~~i~~~~~s-p~~~~l~  410 (490)
                          .+..+..+ ..+++++|. |++..|.
T Consensus       232 ----~~~~i~~p~~~~t~~~f~g~d~~~L~  257 (297)
T 3g4e_A          232 ----RLQTVKLPVDKTTSCCFGGKNYSEMY  257 (297)
T ss_dssp             ----EEEEEECSSSBEEEEEEESGGGCEEE
T ss_pred             ----EEEEEECCCCCceEEEEeCCCCCEEE
Confidence                23333333 578999999 8876544

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.42  E-value=2.9e-09  Score=100.71  Aligned_cols=246  Identities=11%  Similarity=-0.016  Sum_probs=150.7

Q ss_pred             eeEeccccccceEEEEE-----eeCCCceEEEECCCCCCCCcccCCCCccee-ec---ccCCeeEEEECCCCCCEEEEEe
Q psy17682        115 EITISEDYVKEFKEEIR-----KLKSQQALSILPPPSTAPNTGRINADHALV-GG---HKGPVLDIAWSPHDDNVIASGS  185 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~-----~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~-~~---h~~~V~~~~~~p~~~~~l~s~~  185 (490)
                      .+++||+...-|...-.     -+..++.+.+++...     .+....+..- ..   +...-..++|+|+| ++|+++.
T Consensus        70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t-----~~~~~~i~~~~~~~~~~g~~p~~~~~spDG-~~l~v~n  143 (373)
T 2mad_H           70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT-----FLPIADIELPDAPRFDVGPYSWMNANTPNN-ADLLFFQ  143 (373)
T ss_pred             CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC-----CcEEEEEECCCccccccCCCccceEECCCC-CEEEEEe
Confidence            78999996222111100     012467899998751     1111111100 00   11234588999999 6777665


Q ss_pred             C--CCcEEEEECCCCCcccc-cccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-----cC
Q psy17682        186 E--DCVVKVWQIPDGGISRT-LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-----CH  257 (490)
Q Consensus       186 ~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-----~~  257 (490)
                      .  ++.|.++| .+++.+.. +..        .   .++.+.|.+...+++.+.||.+.++|. +++.+....     ..
T Consensus       144 ~~~~~~v~viD-~t~~~~~~~i~~--------~---~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~  210 (373)
T 2mad_H          144 FAAGPAVGLVV-QGGSSDDQLLSS--------P---TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTA  210 (373)
T ss_pred             cCCCCeEEEEE-CCCCEEeEEcCC--------C---ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccC
Confidence            3  57899999 98877655 432        1   125566777667888889999999999 887664322     11


Q ss_pred             CCc-EEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eeeeeeecC---------CCceeEEEEeCCCcEEEEEeCCC--
Q psy17682        258 PDI-VYSASWNWDGSKLLTTCKDKKMRIINPRTGA--IEEEAVCHE---------GSKATRAIYLKSGLIFTTGFSKM--  323 (490)
Q Consensus       258 ~~~-v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~---------~~~~~~~~~s~~~~~l~~~~~~~--  323 (490)
                      ..+ .....+.+++..++..+..+.+.+.|+....  .+..+....         ......+.++|++..+.+....+  
T Consensus       211 ~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~  290 (373)
T 2mad_H          211 AQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSA  290 (373)
T ss_pred             CcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCc
Confidence            122 1234566666655555578899999997653  222221110         11133477899988776654211  


Q ss_pred             -----ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCC-eEEEEecCCCeEEEEEecCCC
Q psy17682        324 -----SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTN-LVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       324 -----~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~g~~dg~i~iwd~~~~~  382 (490)
                           ..+.|.++|..+.+..   ..+........++|+|||+ .++++...++.|.++|+.+++
T Consensus       291 ~~~~~~~~~V~VID~~t~~vv---~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~  352 (373)
T 2mad_H          291 WKLHAAAKEVTSVTGLVGQTS---SQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD  352 (373)
T ss_pred             ccccCCCCeEEEEECCCCEEE---EEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence                 1357999999876532   3333344688999999999 665444468999999999987

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.41  E-value=2.1e-11  Score=116.11  Aligned_cols=269  Identities=10%  Similarity=0.029  Sum_probs=170.5

Q ss_pred             ceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe----------CCCcEEEEECCCCCccccccc
Q psy17682        137 QALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS----------EDCVVKVWQIPDGGISRTLTE  206 (490)
Q Consensus       137 g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~  206 (490)
                      +.+.+++..     +.+   .+..+.--..+  .+.++|+++ +++++.          .++.|.++|..+++.+..+..
T Consensus        99 ~~VsVID~~-----t~~---vv~~I~vG~~P--gia~SpDgk-~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v  167 (426)
T 3c75_H           99 TQQFVIDGS-----TGR---ILGMTDGGFLP--HPVAAEDGS-FFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIEL  167 (426)
T ss_dssp             EEEEEEETT-----TTE---EEEEEEECSSC--EEEECTTSS-CEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEE
T ss_pred             CeEEEEECC-----CCE---EEEEEECCCCC--ceEECCCCC-EEEEEeccccccccCCCCCEEEEEECCCCcEEEEEEC
Confidence            799999985     222   22333322344  899999994 454443          467899999999987766542


Q ss_pred             c-eeeecccccCEEEEEEeeCCCCEEEEEeC--CCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC-CEEEEEeCCCeE
Q psy17682        207 P-VVDLLYHQRRVGLVLWHPTAQNVLLTAGS--DNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG-SKLLTTCKDKKM  282 (490)
Q Consensus       207 ~-~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i  282 (490)
                      + .... ........+.++|+|+ +++++..  ++.|.+.|+.+++.+.++... + .  ....|++ +.+++.+.||++
T Consensus       168 ~g~~r~-~~g~~P~~~~~spDGk-~lyV~n~~~~~~VsVID~~t~kvv~~I~v~-g-~--~~~~p~g~~~~v~~~~dG~~  241 (426)
T 3c75_H          168 PDAPRF-LVGTYQWMNALTPDNK-NLLFYQFSPAPAVGVVDLEGKTFDRMLDVP-D-C--YHIFPASPTVFYMNCRDGSL  241 (426)
T ss_dssp             TTCCCC-CBSCCGGGSEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEEECC-S-E--EEEEEEETTEEEEEETTSSE
T ss_pred             CCcccc-ccCCCcceEEEcCCCC-EEEEEecCCCCeEEEEECCCCeEEEEEEcC-C-c--eeeccCCCcEEEEEcCCCCE
Confidence            1 0000 0112345789999996 6666653  578999999999998888732 2 1  3334443 566777888988


Q ss_pred             EEEeCCCCceeee----eeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe--EEEec-----c---CC
Q psy17682        283 RIINPRTGAIEEE----AVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI--VMVEL-----D---TS  348 (490)
Q Consensus       283 ~iwd~~~~~~~~~----~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~--~~~~~-----~---~~  348 (490)
                      .+.+..+++....    +..........+.+.+++..++...   ..+.+.+.|........  .....     .   ..
T Consensus       242 ~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s---~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p  318 (426)
T 3c75_H          242 ARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPT---YTGKIFQADLTAEGATFRAPIEALTEAERADDWRP  318 (426)
T ss_dssp             EEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEB---TTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEE
T ss_pred             EEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEe---CCCcEEEEeccCCceEEeeeeeecccccccccccc
Confidence            8888866655432    1111111123456788877666555   35688998886533100  00000     0   01


Q ss_pred             CceeeeeecCCCCeEEEEec---------CCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce-eEEee---cce
Q psy17682        349 NGVMFPLYDPDTNLVYLCGK---------GDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG-CDVNS---CEI  415 (490)
Q Consensus       349 ~~i~~~~~s~~~~~l~~~g~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~---~~~  415 (490)
                      .+...++++|+++.+|++..         .++.|.+.|+.+.+    .+..+..+....+++|+||++ ++++.   ++.
T Consensus       319 ~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k----vv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~  394 (426)
T 3c75_H          319 GGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE----RINKIELGHEIDSINVSQDAEPLLYALSAGTQT  394 (426)
T ss_dssp             CSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC----EEEEEEEEEEECEEEECCSSSCEEEEEETTTTE
T ss_pred             CCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe----EEEEEECCCCcCeEEEccCCCEEEEEEcCCCCe
Confidence            12234789999999877643         24579999999987    334444334689999999998 66655   358


Q ss_pred             eEEEEecCCCceEE
Q psy17682        416 GRFFRLNNSGLCQV  429 (490)
Q Consensus       416 ~~~~~~~~~~~~~~  429 (490)
                      +.++++.+.+.+..
T Consensus       395 VsVID~~t~kvv~t  408 (426)
T 3c75_H          395 LHIYDAATGEELRS  408 (426)
T ss_dssp             EEEEETTTCCEEEE
T ss_pred             EEEEECCCCCEEEE
Confidence            88899888874443

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.41  E-value=8.1e-11  Score=121.39  Aligned_cols=202  Identities=11%  Similarity=0.065  Sum_probs=127.3

Q ss_pred             EEEECCCCCCEEEEEeCC-------------CcEEEEECCCCCcccccccceeeecc-cccCEEEEEEeeCCCCEEEEEe
Q psy17682        170 DIAWSPHDDNVIASGSED-------------CVVKVWQIPDGGISRTLTEPVVDLLY-HQRRVGLVLWHPTAQNVLLTAG  235 (490)
Q Consensus       170 ~~~~~p~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~  235 (490)
                      .++|+ || +.|+.++.+             ..|++|++.++.....   .+..... |...+.++.|+|+|+.++++.+
T Consensus       179 ~~~Ws-Dg-~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~---~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~  253 (693)
T 3iuj_A          179 GISWL-GN-EGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDR---LVFGAIPAQHHRYVGATVTEDDRFLLISAA  253 (693)
T ss_dssp             CCEEE-TT-TEEEEEESSCCC-------CCCCEEEEEETTSCGGGCE---EEESCSGGGCCSEEEEEECTTSCEEEEEEE
T ss_pred             cEEEe-CC-CEEEEEEecCcccccccccCCCcEEEEEECCCCcccce---EEEecCCCCCeEEEEEEEcCCCCEEEEEEc
Confidence            45677 66 455555544             3499999877643211   1111222 3445788999999975555554


Q ss_pred             C---CCcEEEEECCCCe-eEEEEecCCCcEEEEEEcCCCCEEEEEe-CC---CeEEEEeCCCCce--eeeeeecCCCcee
Q psy17682        236 S---DNNVAIWNVGTGE-IMIQIECHPDIVYSASWNWDGSKLLTTC-KD---KKMRIINPRTGAI--EEEAVCHEGSKAT  305 (490)
Q Consensus       236 ~---dg~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d---g~i~iwd~~~~~~--~~~~~~~~~~~~~  305 (490)
                      .   +..|.++|+.+++ ....+..+....... ++++|..|+..+ .+   +.|..+|+.++..  ...+..+... +.
T Consensus       254 ~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~  331 (693)
T 3iuj_A          254 NSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ-VL  331 (693)
T ss_dssp             SSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS-CE
T ss_pred             cCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC-EE
Confidence            3   2589999998763 345555565555555 666666555444 33   6799999988754  3445555544 33


Q ss_pred             EEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecC---CCeEEEEEecCCC
Q psy17682        306 RAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKG---DSVIRYFEITAEP  382 (490)
Q Consensus       306 ~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~---dg~i~iwd~~~~~  382 (490)
                        .|++++..|+....+.....|++|++....  ...........+..+.++++++.++++.+.   -+.++.||+.+++
T Consensus       332 --~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~--~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~  407 (693)
T 3iuj_A          332 --TVHSGSGYLFAEYMVDATARVEQFDYEGKR--VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA  407 (693)
T ss_dssp             --EEEEETTEEEEEEEETTEEEEEEECTTSCE--EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred             --EEEEECCEEEEEEEECCeeEEEEEECCCCe--eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence              889998887776633234579999987432  122223344557788889999888665433   2789999988775

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.38  E-value=5.4e-11  Score=122.71  Aligned_cols=245  Identities=9%  Similarity=0.036  Sum_probs=150.0

Q ss_pred             cccCCeeEEEECCCCCCEEE-EEe----CCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        163 GHKGPVLDIAWSPHDDNVIA-SGS----EDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~-s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      +|...+.+++||||| ++|| +.+    ....|++||+.+++.+...      +  +......++|+ |++ .|+.++.+
T Consensus       126 ~~~~~l~~~~~SpDg-~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~------~--~~~k~~~~~Ws-Dg~-~l~y~~~~  194 (693)
T 3iuj_A          126 DGTTALDQLSFSRDG-RILAYSLSLAGSDWREIHLMDVESKQPLETP------L--KDVKFSGISWL-GNE-GFFYSSYD  194 (693)
T ss_dssp             TSCCEEEEEEECTTS-SEEEEEEECSSCCEEEEEEEETTTCSEEEEE------E--EEEESCCCEEE-TTT-EEEEEESS
T ss_pred             CCcEEEEEEEECCCC-CEEEEEEecCCCceEEEEEEECCCCCCCccc------c--CCceeccEEEe-CCC-EEEEEEec
Confidence            466678899999999 5555 333    2357999999998754320      1  11113567899 986 66666665


Q ss_pred             C-------------cEEEEECCCCee--EEEEe--c-CCCcEEEEEEcCCCCEEEEEeC----CCeEEEEeCCCCc-eee
Q psy17682        238 N-------------NVAIWNVGTGEI--MIQIE--C-HPDIVYSASWNWDGSKLLTTCK----DKKMRIINPRTGA-IEE  294 (490)
Q Consensus       238 g-------------~v~iwd~~~~~~--~~~~~--~-~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~-~~~  294 (490)
                      .             .|++|++.++..  ...+.  . |......+.|+|||++|+....    .+.|+++|+.++. ...
T Consensus       195 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~  274 (693)
T 3iuj_A          195 KPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLL  274 (693)
T ss_dssp             CCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCE
T ss_pred             CcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceE
Confidence            3             399999987642  22232  3 4455788999999998866543    2489999998764 344


Q ss_pred             eeeecCCCceeEEEEeCCCcEE-EEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC--
Q psy17682        295 EAVCHEGSKATRAIYLKSGLIF-TTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS--  371 (490)
Q Consensus       295 ~~~~~~~~~~~~~~~s~~~~~l-~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg--  371 (490)
                      .+..+... .... ++++|..| +....+...+.|..+|+.+...........+...+.  .|+++++.|+++...++  
T Consensus       275 ~l~~~~~~-~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~  350 (693)
T 3iuj_A          275 TVQGDLDA-DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATA  350 (693)
T ss_dssp             EEECSSSS-CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEE
T ss_pred             EEeCCCCc-eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCee
Confidence            45544443 3333 56665544 444433335789999998754311111123333444  89999999977766665  


Q ss_pred             eEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--c----ceeEEEEecCCC
Q psy17682        372 VIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--C----EIGRFFRLNNSG  425 (490)
Q Consensus       372 ~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~----~~~~~~~~~~~~  425 (490)
                      .|++|++..+.  .+.+. +.....+..+.++|++..++..  +    ..+..|++.++.
T Consensus       351 ~l~~~d~~g~~--~~~l~-~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~  407 (693)
T 3iuj_A          351 RVEQFDYEGKR--VREVA-LPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA  407 (693)
T ss_dssp             EEEEECTTSCE--EEEEC-CSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred             EEEEEECCCCe--eEEee-cCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence            67888877542  22221 2233457777888887654433  2    244555555554

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.37  E-value=1.4e-11  Score=115.67  Aligned_cols=135  Identities=14%  Similarity=0.069  Sum_probs=105.0

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEE
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAI  242 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~i  242 (490)
                      .+.+ |+.++|  ++ ++|+++ .++.|++||+.+......       ...|...+.++.+.+.   -++++..||.|.+
T Consensus        86 ~lp~-V~~l~f--d~-~~L~v~-~~~~l~v~dv~sl~~~~~-------~~~~~~~v~~i~~~~p---~~av~~~dG~L~v  150 (388)
T 1xip_A           86 EIPD-VIFVCF--HG-DQVLVS-TRNALYSLDLEELSEFRT-------VTSFEKPVFQLKNVNN---TLVILNSVNDLSA  150 (388)
T ss_dssp             ECTT-EEEEEE--ET-TEEEEE-ESSEEEEEESSSTTCEEE-------EEECSSCEEEEEECSS---EEEEEETTSEEEE
T ss_pred             eCCC-eeEEEE--CC-CEEEEE-cCCcEEEEEchhhhccCc-------cceeecceeeEEecCC---CEEEEECCCCEEE
Confidence            3556 999999  66 788888 889999999977653322       2336677888777654   3888899999999


Q ss_pred             EECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--eeeee---------ecCCCceeEEEEeC
Q psy17682        243 WNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI--EEEAV---------CHEGSKATRAIYLK  311 (490)
Q Consensus       243 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~---------~~~~~~~~~~~~s~  311 (490)
                      ||+.+++...    +...|++++|+|+|  ++.|..||++++|+...++.  ..++.         +|. ..+.++.|.+
T Consensus       151 ~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~-~~V~sI~wl~  223 (388)
T 1xip_A          151 LDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEE-YSPLSVTILS  223 (388)
T ss_dssp             EETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTT-SEEEEEEESS
T ss_pred             EEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCC-eeEEEEEEec
Confidence            9999877643    34579999999999  78899999999999887775  55552         133 4599999999


Q ss_pred             CCcEEEEE
Q psy17682        312 SGLIFTTG  319 (490)
Q Consensus       312 ~~~~l~~~  319 (490)
                      ++.++++=
T Consensus       224 ~~~flv~y  231 (388)
T 1xip_A          224 PQDFLAVF  231 (388)
T ss_dssp             SSEEEEEE
T ss_pred             CCeEEEEE
Confidence            99988763

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.37  E-value=2.5e-10  Score=105.28  Aligned_cols=239  Identities=10%  Similarity=-0.009  Sum_probs=151.8

Q ss_pred             ceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC
Q psy17682        159 ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN  238 (490)
Q Consensus       159 ~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg  238 (490)
                      ..+..+.....+..|+|++..++++...++.|..|+. +++. ..       +..+...+.+++++++|. ++++...++
T Consensus        38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~-------~~~~~~~~~gl~~d~dG~-l~v~~~~~~  107 (305)
T 3dr2_A           38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DV-------LLDATAFTNGNAVDAQQR-LVHCEHGRR  107 (305)
T ss_dssp             EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EE-------EEESCSCEEEEEECTTSC-EEEEETTTT
T ss_pred             EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EE-------EeCCCCccceeeECCCCC-EEEEECCCC
Confidence            3445556678899999998557888888899999997 4432 22       222556789999999985 666555567


Q ss_pred             cEEEEECCCCeeEEEEec----CCCcEEEEEEcCCCCEEEE----EeC-------------CCeEEEEeCCCCceeeeee
Q psy17682        239 NVAIWNVGTGEIMIQIEC----HPDIVYSASWNWDGSKLLT----TCK-------------DKKMRIINPRTGAIEEEAV  297 (490)
Q Consensus       239 ~v~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~~~~  297 (490)
                      .|.+|+.. ++.......    ....+..++++|+|+++++    |..             .+.|+.+|..+++..... 
T Consensus       108 ~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-  185 (305)
T 3dr2_A          108 AITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-  185 (305)
T ss_dssp             EEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-
T ss_pred             EEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-
Confidence            89999986 553222211    1234668999999998886    332             356888888777654433 


Q ss_pred             ecCCCceeEEEEeCCCcEEEEEeCCC---ceeEEEEecCCCCCCCeEEEec--cCCCceeeeeecCCCCeEEEEecCCCe
Q psy17682        298 CHEGSKATRAIYLKSGLIFTTGFSKM---SERQYSLRAPDHLDEPIVMVEL--DTSNGVMFPLYDPDTNLVYLCGKGDSV  372 (490)
Q Consensus       298 ~~~~~~~~~~~~s~~~~~l~~~~~~~---~~~~i~iwd~~~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~g~~dg~  372 (490)
                      . .. ....++|+|+++.|..+....   ..+.|.+|++.... ......+  ........++++++|++. ++. .+ .
T Consensus       186 ~-~~-~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~-~~-g  259 (305)
T 3dr2_A          186 D-LD-HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLW-SSS-GT-G  259 (305)
T ss_dssp             E-ES-SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEE-ECC-SS-E
T ss_pred             c-CC-CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEE-Eec-CC-c
Confidence            2 22 378899999999776665210   02689999887543 1111111  112335678899999954 443 44 4


Q ss_pred             EEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEe
Q psy17682        373 IRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRL  421 (490)
Q Consensus       373 i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~  421 (490)
                      |.+|+.. ++    .+..+..+..+.+++|+|++..|..+... .+|.+
T Consensus       260 v~~~~~~-g~----~~~~~~~~~~~~~~~f~~d~~~L~it~~~-~l~~~  302 (305)
T 3dr2_A          260 VCVFDSD-GQ----LLGHIPTPGTASNCTFDQAQQRLFITGGP-CLWML  302 (305)
T ss_dssp             EEEECTT-SC----EEEEEECSSCCCEEEECTTSCEEEEEETT-EEEEE
T ss_pred             EEEECCC-CC----EEEEEECCCceeEEEEeCCCCEEEEEcCC-eEEEE
Confidence            8999874 44    23333334468899999988655544332 44443

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.36  E-value=8.5e-10  Score=101.26  Aligned_cols=191  Identities=10%  Similarity=0.052  Sum_probs=121.2

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC---------
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS---------  236 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~---------  236 (490)
                      ..+.+++++|+| +++++ . ++.|.+||.++++........   .......+.++++.|+|. ++++...         
T Consensus        54 ~~~~~i~~~~dG-~l~v~-~-~~~l~~~d~~~g~~~~~~~~~---~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~  126 (297)
T 3g4e_A           54 APVSSVALRQSG-GYVAT-I-GTKFCALNWKEQSAVVLATVD---NDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLE  126 (297)
T ss_dssp             SCEEEEEEBTTS-SEEEE-E-TTEEEEEETTTTEEEEEEECC---TTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCC
T ss_pred             CceEEEEECCCC-CEEEE-E-CCeEEEEECCCCcEEEEEecC---CCCCCCCCCCEEECCCCC-EEEecCCccccccccc
Confidence            468899999998 55444 4 568999998776542211100   001234578999999996 5554322         


Q ss_pred             CCcEEEEECCC-CeeEEEEecCCCcEEEEEEcCCCCEEE-EEeCCCeEEEEeC--CCCcee--eeee---ecCCCceeEE
Q psy17682        237 DNNVAIWNVGT-GEIMIQIECHPDIVYSASWNWDGSKLL-TTCKDKKMRIINP--RTGAIE--EEAV---CHEGSKATRA  307 (490)
Q Consensus       237 dg~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~--~~~~~~--~~~~---~~~~~~~~~~  307 (490)
                      ...-.+|.+.. ++... +..+......++|+|+++.|+ +.+.++.|.+||+  .++...  ..+.   ...+ .+..+
T Consensus       127 ~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~-~p~g~  204 (297)
T 3g4e_A          127 RHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQ-IPDGM  204 (297)
T ss_dssp             TTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGC-EEEEE
T ss_pred             CCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCC-CCCee
Confidence            12234555442 33332 333445578999999998665 4556789999987  455432  1121   1222 47889


Q ss_pred             EEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeec-CCCCeEEEEecCC
Q psy17682        308 IYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYD-PDTNLVYLCGKGD  370 (490)
Q Consensus       308 ~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~g~~d  370 (490)
                      +++++|++.++..   ..+.|.+||..+++....+.  .+...+++++|. |+++.|+++...+
T Consensus       205 ~~d~~G~lwva~~---~~~~v~~~d~~tG~~~~~i~--~p~~~~t~~~f~g~d~~~L~vt~~~~  263 (297)
T 3g4e_A          205 CIDAEGKLWVACY---NGGRVIRLDPVTGKRLQTVK--LPVDKTTSCCFGGKNYSEMYVTCARD  263 (297)
T ss_dssp             EEBTTSCEEEEEE---TTTEEEEECTTTCCEEEEEE--CSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred             EECCCCCEEEEEc---CCCEEEEEcCCCceEEEEEE--CCCCCceEEEEeCCCCCEEEEEcCCc
Confidence            9999998887776   46779999998665322222  223568999998 8999998877554

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.34  E-value=2.3e-09  Score=99.77  Aligned_cols=220  Identities=8%  Similarity=0.054  Sum_probs=142.7

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG  246 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~  246 (490)
                      ...+..|+|+++.++++...++.|..||..+++. ..+.        ....+.++.|.|++. ++++ +.+ .|.+||..
T Consensus        50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~--------~~~~v~~i~~~~dg~-l~v~-~~~-gl~~~d~~  117 (326)
T 2ghs_A           50 LGEGPTFDPASGTAWWFNILERELHELHLASGRK-TVHA--------LPFMGSALAKISDSK-QLIA-SDD-GLFLRDTA  117 (326)
T ss_dssp             BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEEE--------CSSCEEEEEEEETTE-EEEE-ETT-EEEEEETT
T ss_pred             CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEE--------CCCcceEEEEeCCCe-EEEE-ECC-CEEEEECC
Confidence            4567899998657788887889999999876643 2111        345789999999985 5554 444 49999998


Q ss_pred             CCeeEEEEec----CCCcEEEEEEcCCCCEEEEEeC------CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEE
Q psy17682        247 TGEIMIQIEC----HPDIVYSASWNWDGSKLLTTCK------DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIF  316 (490)
Q Consensus       247 ~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  316 (490)
                      +++.......    ....+..++++|+|+++++...      .+.|+.++  +++.. .+..... ....++|+|+|+.+
T Consensus       118 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~-~~~~i~~s~dg~~l  193 (326)
T 2ghs_A          118 TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADIS-IPNSICFSPDGTTG  193 (326)
T ss_dssp             TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEES-SEEEEEECTTSCEE
T ss_pred             CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCc-ccCCeEEcCCCCEE
Confidence            8775432221    1235889999999997765542      25677777  45433 2222222 36789999999866


Q ss_pred             EEEeCCCceeEEEEecCC--CC-CC--CeEEEecc-CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee
Q psy17682        317 TTGFSKMSERQYSLRAPD--HL-DE--PIVMVELD-TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT  390 (490)
Q Consensus       317 ~~~~~~~~~~~i~iwd~~--~~-~~--~~~~~~~~-~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~  390 (490)
                      ..+..  ..+.|.+|+..  ++ ..  ...+.... .......++++++|++. ++...++.|.+|+. +++ ..   ..
T Consensus       194 yv~~~--~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lw-va~~~~~~v~~~d~-~g~-~~---~~  265 (326)
T 2ghs_A          194 YFVDT--KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIW-NARWGEGAVDRYDT-DGN-HI---AR  265 (326)
T ss_dssp             EEEET--TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEE-EEEETTTEEEEECT-TCC-EE---EE
T ss_pred             EEEEC--CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEE-EEEeCCCEEEEECC-CCC-EE---EE
Confidence            55432  36789999986  33 21  12222222 22346788999999766 55555678999998 454 22   22


Q ss_pred             eeC-CCceeeEEEe-eCceeEE
Q psy17682        391 FQT-PDPQRGIGMM-PKRGCDV  410 (490)
Q Consensus       391 ~~~-~~~i~~~~~s-p~~~~l~  410 (490)
                      +.. ...+.+++|+ |++..+.
T Consensus       266 i~~~~~~~~~~af~g~d~~~L~  287 (326)
T 2ghs_A          266 YEVPGKQTTCPAFIGPDASRLL  287 (326)
T ss_dssp             EECSCSBEEEEEEESTTSCEEE
T ss_pred             EECCCCCcEEEEEecCCCCEEE
Confidence            232 2368999998 8875443

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.33  E-value=1.2e-10  Score=109.65  Aligned_cols=234  Identities=12%  Similarity=0.030  Sum_probs=152.4

Q ss_pred             CCCCCEEEEEeCCCcEEEEECCCC----Ccccccccceeee-cccccCEEEEEEeeCCCCEEEEEeCC------CcEEEE
Q psy17682        175 PHDDNVIASGSEDCVVKVWQIPDG----GISRTLTEPVVDL-LYHQRRVGLVLWHPTAQNVLLTAGSD------NNVAIW  243 (490)
Q Consensus       175 p~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~s~~~d------g~v~iw  243 (490)
                      ++.+.+++++..++.|.++|+.+.    +..+.+. |.... .........+...|+|  +++++..+      +.|.++
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie-~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vl  169 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIE-PEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILML  169 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEEC-HHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEE
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeec-hhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEE
Confidence            777667777888899999998755    2222221 00000 0011245677888998  66666555      789999


Q ss_pred             ECCCCeeEEEEecCC---CcEEEEEEcCCCCEEEEEe-------------------CCCeEEEEeCCCCceeeeeeec-C
Q psy17682        244 NVGTGEIMIQIECHP---DIVYSASWNWDGSKLLTTC-------------------KDKKMRIINPRTGAIEEEAVCH-E  300 (490)
Q Consensus       244 d~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~-------------------~dg~i~iwd~~~~~~~~~~~~~-~  300 (490)
                      |..+++.+.++....   .--+.+.|+|+++.+++..                   .+.+|.+||+.+++.+.++... .
T Consensus       170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~  249 (462)
T 2ece_A          170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE  249 (462)
T ss_dssp             CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred             ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence            999999998886221   2234688899999888874                   3689999999998888877642 2


Q ss_pred             CCceeEEEE--eCCCcEEEEEeC---CCceeEEEEecCCCCCCCeEEEe--ccC-----------------CCceeeeee
Q psy17682        301 GSKATRAIY--LKSGLIFTTGFS---KMSERQYSLRAPDHLDEPIVMVE--LDT-----------------SNGVMFPLY  356 (490)
Q Consensus       301 ~~~~~~~~~--s~~~~~l~~~~~---~~~~~~i~iwd~~~~~~~~~~~~--~~~-----------------~~~i~~~~~  356 (490)
                      +.....+.|  +|+++++.++..   ...++.|.+|..+.+. ......  ...                 ......+.+
T Consensus       250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~-~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~l  328 (462)
T 2ece_A          250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK-WNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDI  328 (462)
T ss_dssp             EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-EEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEE
T ss_pred             CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-eeEEEEEeCCCccccccccccccccccCCCceeEEEE
Confidence            223555655  999998877763   0014566655544321 000110  000                 234678899


Q ss_pred             cCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC---------------CceeeEEEeeCceeEEeec
Q psy17682        357 DPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP---------------DPQRGIGMMPKRGCDVNSC  413 (490)
Q Consensus       357 s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~---------------~~i~~~~~sp~~~~l~~~~  413 (490)
                      |+||++||++.-..+.|.+||+..... .+.+.....+               ..-..++++|||+++.++.
T Consensus       329 S~DGrfLYVSnrg~d~VavfdV~d~~~-~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          329 SLDDKFLYLSLWGIGEVRQYDISNPFK-PVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             CTTSCEEEEEETTTTEEEEEECSSTTS-CEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred             CCCCCEEEEEeCCCCEEEEEEecCCCC-cEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence            999999999988889999999974321 1233333322               1358899999998888776

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.32  E-value=1.4e-09  Score=104.49  Aligned_cols=238  Identities=12%  Similarity=0.006  Sum_probs=143.0

Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC--cEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC--VVK  191 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg--~i~  191 (490)
                      ..++++++.     .+.++...++.|++|+..     .+.    +..+........ ++|+|++ ..|+++..++  .|.
T Consensus       134 ~~la~d~~g-----~lyv~d~~~~~I~~id~~-----~g~----~~~~~~~~~~~~-ia~~~~g-~~l~~~d~~~~~~I~  197 (409)
T 3hrp_A          134 WGIAAVGNN-----TVLAYQRDDPRVRLISVD-----DNK----VTTVHPGFKGGK-PAVTKDK-QRVYSIGWEGTHTVY  197 (409)
T ss_dssp             EEEEECSTT-----EEEEEETTTTEEEEEETT-----TTE----EEEEEETCCBCB-CEECTTS-SEEEEEBSSTTCEEE
T ss_pred             eEEEEeCCC-----CEEEEecCCCcEEEEECC-----CCE----EEEeeccCCCCc-eeEecCC-CcEEEEecCCCceEE
Confidence            455665553     233444455677777663     111    111111122233 8999988 6777777765  788


Q ss_pred             EEECCCCCcccccccceeeecc-cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEE----EecCCCcE-E-EE
Q psy17682        192 VWQIPDGGISRTLTEPVVDLLY-HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQ----IECHPDIV-Y-SA  264 (490)
Q Consensus       192 iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~----~~~~~~~v-~-~~  264 (490)
                      +++...+.....+.    .... ....+.+++++|++. .|+.+..++.|+.||..++.....    ..++...- . .+
T Consensus       198 ~~d~~~~~~~~~~g----~~~~~~~~~p~~iav~p~~g-~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~i  272 (409)
T 3hrp_A          198 VYMKASGWAPTRIG----QLGSTFSGKIGAVALDETEE-WLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYL  272 (409)
T ss_dssp             EEEGGGTTCEEEEE----ECCTTSCSCCCBCEECTTSS-EEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEE
T ss_pred             EEEcCCCceeEEee----eccchhcCCcEEEEEeCCCC-eEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccE
Confidence            88876554322220    0111 345678899999543 455567788999999987753322    11222222 2 89


Q ss_pred             EEcCC-CCEEEEEeCCCeEEEEeCCCCceeeeeeecC--------------CCceeEEEEeCCCcEEEEEeCCCceeEEE
Q psy17682        265 SWNWD-GSKLLTTCKDKKMRIINPRTGAIEEEAVCHE--------------GSKATRAIYLKSGLIFTTGFSKMSERQYS  329 (490)
Q Consensus       265 ~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--------------~~~~~~~~~s~~~~~l~~~~~~~~~~~i~  329 (490)
                      +|+|+ +.++++-..++.|+.|+....  ...+.++.              -.....++++++|+++++-..  ..+.|+
T Consensus       273 a~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~--~~~~I~  348 (409)
T 3hrp_A          273 IYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGF--KGYCLR  348 (409)
T ss_dssp             EEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETT--TTCEEE
T ss_pred             EEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCC--CCCEEE
Confidence            99995 566666667889999997643  33333322              123788999999996665430  267899


Q ss_pred             EecCCCCCCCeEEEecc-------------CCCceeeeeecCCCCeEEEEecCCCeEEEEEe
Q psy17682        330 LRAPDHLDEPIVMVELD-------------TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEI  378 (490)
Q Consensus       330 iwd~~~~~~~~~~~~~~-------------~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~  378 (490)
                      .|++.++. ...+....             .-.....++++++|.+ +++-..++.|+.+++
T Consensus       349 ~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~l-yVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          349 KLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGY-WIAEAWGKAIRKYAV  408 (409)
T ss_dssp             EEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEE-EEEESTTCEEEEEEE
T ss_pred             EEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCE-EEEECCCCeEEEEEe
Confidence            99966543 11111110             0134678999999655 477778888888775

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.32  E-value=9.3e-10  Score=101.43  Aligned_cols=236  Identities=8%  Similarity=0.048  Sum_probs=151.1

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      ..+..+..+........|+|+++.++++...++.|..|+. ++..                                   
T Consensus        35 ~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-----------------------------------   78 (305)
T 3dr2_A           35 ARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-----------------------------------   78 (305)
T ss_dssp             CCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-----------------------------------
T ss_pred             CceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-----------------------------------
Confidence            4555666677788899999998557888878888888876 3220                                   


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                                               .                   .+..+...+.+++++++| +++++...++.|.+|+
T Consensus        79 -------------------------~-------------------~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~  113 (305)
T 3dr2_A           79 -------------------------D-------------------VLLDATAFTNGNAVDAQQ-RLVHCEHGRRAITRSD  113 (305)
T ss_dssp             -------------------------E-------------------EEEESCSCEEEEEECTTS-CEEEEETTTTEEEEEC
T ss_pred             -------------------------E-------------------EEeCCCCccceeeECCCC-CEEEEECCCCEEEEEC
Confidence                                     0                   111233457889999988 6666655667899999


Q ss_pred             CCCCCcccccccceeeecc-cccCEEEEEEeeCCCCEEEE----EeC-------------CCcEEEEECCCCeeEEEEec
Q psy17682        195 IPDGGISRTLTEPVVDLLY-HQRRVGLVLWHPTAQNVLLT----AGS-------------DNNVAIWNVGTGEIMIQIEC  256 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s----~~~-------------dg~v~iwd~~~~~~~~~~~~  256 (490)
                      .. ++. ..+..   ...+ ....+.++++.|+|. ++++    |..             .+.|..+|..+++.....  
T Consensus       114 ~~-g~~-~~~~~---~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--  185 (305)
T 3dr2_A          114 AD-GQA-HLLVG---RYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--  185 (305)
T ss_dssp             TT-SCE-EEEEC---EETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--
T ss_pred             CC-CCE-EEEEe---ccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--
Confidence            75 443 22111   0111 123467899999995 6665    322             246777887666644332  


Q ss_pred             CCCcEEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCcee--eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEE
Q psy17682        257 HPDIVYSASWNWDGSKLLTTCKD------KKMRIINPRTGAIE--EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQY  328 (490)
Q Consensus       257 ~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i  328 (490)
                      .......++|+|+++.|+.+...      +.|++||+..+...  ..+.......+..++++++|++.++.    .+ .|
T Consensus       186 ~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~----~~-gv  260 (305)
T 3dr2_A          186 DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS----GT-GV  260 (305)
T ss_dssp             EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC----SS-EE
T ss_pred             cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec----CC-cE
Confidence            33457889999999987777665      78999998765411  11111111225678899999965544    23 48


Q ss_pred             EEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEec
Q psy17682        329 SLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK  368 (490)
Q Consensus       329 ~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~  368 (490)
                      .+|+... +.   ...+.....+..++|+++++.|++++.
T Consensus       261 ~~~~~~g-~~---~~~~~~~~~~~~~~f~~d~~~L~it~~  296 (305)
T 3dr2_A          261 CVFDSDG-QL---LGHIPTPGTASNCTFDQAQQRLFITGG  296 (305)
T ss_dssp             EEECTTS-CE---EEEEECSSCCCEEEECTTSCEEEEEET
T ss_pred             EEECCCC-CE---EEEEECCCceeEEEEeCCCCEEEEEcC
Confidence            9999853 32   222222336889999999999976653

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.31  E-value=2.4e-09  Score=102.00  Aligned_cols=281  Identities=13%  Similarity=0.100  Sum_probs=173.5

Q ss_pred             cCCCceEEeeeCC----CeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEE
Q psy17682         54 PTAQNVLLTAGKE----AEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEE  129 (490)
Q Consensus        54 p~~~~~l~s~~~D----~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~  129 (490)
                      |++..++++...+    +.|.+.|..+++.                  ...+.. +    . .- .++++|+...-|...
T Consensus        82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~v------------------v~~I~v-G----~-~P-gia~SpDgk~lyVan  136 (426)
T 3c75_H           82 PDARRVYIQDPAHFAAITQQFVIDGSTGRI------------------LGMTDG-G----F-LP-HPVAAEDGSFFAQAS  136 (426)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETTTTEE------------------EEEEEE-C----S-SC-EEEECTTSSCEEEEE
T ss_pred             CCCCEEEEECCCcCCCCCeEEEEECCCCEE------------------EEEEEC-C----C-CC-ceEECCCCCEEEEEe
Confidence            3443455555544    7999999988652                  111111 0    0 12 789999974333332


Q ss_pred             EEe-----eCCCceEEEECCCCCCCCcccCCCCcceee-c------ccCCeeEEEECCCCCCEEEEEeC--CCcEEEEEC
Q psy17682        130 IRK-----LKSQQALSILPPPSTAPNTGRINADHALVG-G------HKGPVLDIAWSPHDDNVIASGSE--DCVVKVWQI  195 (490)
Q Consensus       130 ~~~-----~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~-~------h~~~V~~~~~~p~~~~~l~s~~~--dg~i~iwd~  195 (490)
                      ...     +..++.|.+++..     +.+.   ...+. +      .......+.|+|+| ++++++..  ++.|.+.|+
T Consensus       137 ~~~~~~~~G~~~~~VsviD~~-----t~~v---v~~I~v~g~~r~~~g~~P~~~~~spDG-k~lyV~n~~~~~~VsVID~  207 (426)
T 3c75_H          137 TVFERIARGKRTDYVEVFDPV-----TFLP---IADIELPDAPRFLVGTYQWMNALTPDN-KNLLFYQFSPAPAVGVVDL  207 (426)
T ss_dssp             EEEEETTEEEEEEEEEEECTT-----TCCE---EEEEEETTCCCCCBSCCGGGSEECTTS-SEEEEEECSSSCEEEEEET
T ss_pred             ccccccccCCCCCEEEEEECC-----CCcE---EEEEECCCccccccCCCcceEEEcCCC-CEEEEEecCCCCeEEEEEC
Confidence            111     1246789999885     2221   12221 1      11235678999999 67777653  578999999


Q ss_pred             CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE----ecCCCcE-EEEEEcCCC
Q psy17682        196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI----ECHPDIV-YSASWNWDG  270 (490)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~----~~~~~~v-~~~~~~~~~  270 (490)
                      .+++.+..+..+        .   +....|++...+++.+.||.+.+.+..+++.....    .....++ ..+.+.+++
T Consensus       208 ~t~kvv~~I~v~--------g---~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg  276 (426)
T 3c75_H          208 EGKTFDRMLDVP--------D---CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS  276 (426)
T ss_dssp             TTTEEEEEEECC--------S---EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT
T ss_pred             CCCeEEEEEEcC--------C---ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC
Confidence            999877765421        1   13345655567778888888888888666554321    1111111 235678998


Q ss_pred             CEEEEEeCCCeEEEEeCCCCcee--eeeeec------CC---CceeEEEEeCCCcEEEEEeCC-------CceeEEEEec
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIE--EEAVCH------EG---SKATRAIYLKSGLIFTTGFSK-------MSERQYSLRA  332 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~------~~---~~~~~~~~s~~~~~l~~~~~~-------~~~~~i~iwd  332 (490)
                      ..++..+..+.+.+.|.......  ..+...      .+   .....++++|++..+.+....       ...+.|.+.|
T Consensus       277 ~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID  356 (426)
T 3c75_H          277 GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLN  356 (426)
T ss_dssp             CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred             CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEE
Confidence            88888888899999998765422  111100      00   012236899997766554311       1256899999


Q ss_pred             CCCCCCCeEEEeccCCCceeeeeecCCCC-eEEEEecCCCeEEEEEecCCC
Q psy17682        333 PDHLDEPIVMVELDTSNGVMFPLYDPDTN-LVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      ..+.+....+   ........+.|+|||+ .+|++...++.|.++|+.+.+
T Consensus       357 ~~T~kvv~~I---~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k  404 (426)
T 3c75_H          357 AETGERINKI---ELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE  404 (426)
T ss_dssp             TTTCCEEEEE---EEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred             CCCCeEEEEE---ECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence            9987643332   2233578999999999 786666579999999999998

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.30  E-value=3.7e-11  Score=112.84  Aligned_cols=178  Identities=9%  Similarity=-0.001  Sum_probs=128.6

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccc-----ccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEE
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISR-----TLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVA  241 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~  241 (490)
                      +++.+++++.. .++++|+.+ .+.+|++++.+...     .+ .+.... .+.. |+.++|  ++ +.|+++ .++.|+
T Consensus        39 ~~nlLais~~~-gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~-~~~~~~-~lp~-V~~l~f--d~-~~L~v~-~~~~l~  109 (388)
T 1xip_A           39 SLQNLDISNSK-SLFVAASGS-KAVVGELQLLRDHITSDSTPL-TFKWEK-EIPD-VIFVCF--HG-DQVLVS-TRNALY  109 (388)
T ss_dssp             CCBCEEEETTT-TEEEEEETT-EEEEEEHHHHHHHHHSSSCCC-CCSEEE-ECTT-EEEEEE--ET-TEEEEE-ESSEEE
T ss_pred             cccEEEEcCCC-CEEEEeCCC-EEEEEEhhHhhhhhccccccc-cceEEe-eCCC-eeEEEE--CC-CEEEEE-cCCcEE
Confidence            78999999987 789999988 56679875432100     01 121112 2556 999999  66 488888 889999


Q ss_pred             EEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeC
Q psy17682        242 IWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFS  321 (490)
Q Consensus       242 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~  321 (490)
                      +||+++.........|...+.++.+.+.  .+++++.||.|.+||+.++.... +   .. .+++++|+|+|  ++.|. 
T Consensus       110 v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-~---~~-~Vs~v~WSpkG--~~vg~-  179 (388)
T 1xip_A          110 SLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-L---AQ-NVTSFDVTNSQ--LAVLL-  179 (388)
T ss_dssp             EEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-E---EE-SEEEEEECSSE--EEEEE-
T ss_pred             EEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-c---cC-CceEEEEcCCc--eEEEE-
Confidence            9999877666666677888888887754  38889999999999999887643 1   12 39999999999  45565 


Q ss_pred             CCceeEEEEecCCCCCC--CeEEE-------eccCCCceeeeeecCCCCeEEE
Q psy17682        322 KMSERQYSLRAPDHLDE--PIVMV-------ELDTSNGVMFPLYDPDTNLVYL  365 (490)
Q Consensus       322 ~~~~~~i~iwd~~~~~~--~~~~~-------~~~~~~~i~~~~~s~~~~~l~~  365 (490)
                        .++.+++|+......  ...+.       ...+...|.++.|.+++.++++
T Consensus       180 --~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~  230 (388)
T 1xip_A          180 --KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV  230 (388)
T ss_dssp             --TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             --cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence              588999998876542  11120       0125677999999999998844

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.29  E-value=5.6e-10  Score=104.79  Aligned_cols=241  Identities=8%  Similarity=-0.035  Sum_probs=150.2

Q ss_pred             CCeeEEEECCCCCCEEEEEe--CCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC-----CC
Q psy17682        166 GPVLDIAWSPHDDNVIASGS--EDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS-----DN  238 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-----dg  238 (490)
                      ..+..++++|+| +++++..  .++.++||.+.+++ +..+.........+-..+.++++.+++. ++++-..     ++
T Consensus        17 ~~p~~va~~~~g-~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~~   93 (343)
T 2qe8_A           17 LAPGNITLTPDG-RLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSKSVP   93 (343)
T ss_dssp             SCEEEEEECTTS-CEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHTSCC
T ss_pred             CCcceEEECCCC-CEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcCCCC
Confidence            689999999988 7777753  23435666665443 2222110011223556899999999984 5554432     57


Q ss_pred             cEEEEECCCCeeEEEEecC------CCcEEEEEEcCCCCE-EEEEe---CCCeEEEEeCCCCceeeeeeecC--------
Q psy17682        239 NVAIWNVGTGEIMIQIECH------PDIVYSASWNWDGSK-LLTTC---KDKKMRIINPRTGAIEEEAVCHE--------  300 (490)
Q Consensus       239 ~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~-l~~~~---~dg~i~iwd~~~~~~~~~~~~~~--------  300 (490)
                      .|.+||+.+++.+..+...      ...+..+++++++.. +++..   .++.|.+||+.+++..+.+..|.        
T Consensus        94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~  173 (343)
T 2qe8_A           94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID  173 (343)
T ss_dssp             EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred             eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence            8999999999877766532      234689999986544 45544   57899999998877655442210        


Q ss_pred             --------------------CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCC---CCCC-----eEEEeccCCCcee
Q psy17682        301 --------------------GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDH---LDEP-----IVMVELDTSNGVM  352 (490)
Q Consensus       301 --------------------~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~---~~~~-----~~~~~~~~~~~i~  352 (490)
                                          ...+..++++|+|+.|..+..  ....+..++...   ....     ..+....+.....
T Consensus       174 ~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pd  251 (343)
T 2qe8_A          174 LVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPM--HSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICD  251 (343)
T ss_dssp             CEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEES--SCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCS
T ss_pred             eeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeC--CCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCc
Confidence                                012577999999987777653  223555554321   1000     0001111223456


Q ss_pred             eeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc
Q psy17682        353 FPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       353 ~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~  414 (490)
                      .++++++|+.+ ++...++.|.+||..+++ + ..+..........+++|.+++.+.++...
T Consensus       252 gia~d~~G~l~-va~~~~~~V~~~d~~~G~-~-~~~~~~~~~~~p~~va~~~~g~l~v~~~~  310 (343)
T 2qe8_A          252 GISIDKDHNIY-VGDLAHSAIGVITSADRA-Y-KLLVTDEKLSWTDSFNFGSDGYLYFDCNQ  310 (343)
T ss_dssp             CEEECTTCCEE-EEEGGGTEEEEEETTTTE-E-EEEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred             eEEECCCCCEE-EEccCCCeEEEEECCCCC-E-EEEEECCceecCCeeEECCCCcEEEEeCc
Confidence            78999998765 778888999999985554 2 22222122345789999999988777654

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.24  E-value=3.8e-10  Score=109.91  Aligned_cols=242  Identities=10%  Similarity=0.052  Sum_probs=165.1

Q ss_pred             CCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEE-e-eCCCCEEEEEe-----------------
Q psy17682        175 PHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLW-H-PTAQNVLLTAG-----------------  235 (490)
Q Consensus       175 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-p~~~~~l~s~~-----------------  235 (490)
                      +||+.++++...++.|.+.|+.+.++.+.+..|      .......+++ . |+++ ++++++                 
T Consensus        99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip------~g~~phg~~~~~~p~~~-~v~~~~~~~~p~~~dg~~l~~~~  171 (595)
T 1fwx_A           99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIP------NAKGIHGLRPQKWPRSN-YVFCNGEDETPLVNDGTNMEDVA  171 (595)
T ss_dssp             EEEEEEEEEETTTTEEEEEETTTTEEEEEEECS------SCCSEEEEEECCSSBCS-EEEEEECSCEESSCSSSSTTCGG
T ss_pred             cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCC------CCCCCcceeeeecCCCc-EEEEecccccccCCCCccccccc
Confidence            367444454555667999999999876644322      3345788888 4 8986 566653                 


Q ss_pred             -CCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCC----------------------------------
Q psy17682        236 -SDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK----------------------------------  280 (490)
Q Consensus       236 -~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----------------------------------  280 (490)
                       .++.+.+.|..+.+.+.++.-.. ....++++|+|+++++.+.+.                                  
T Consensus       172 ~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~  250 (595)
T 1fwx_A          172 NYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDY  250 (595)
T ss_dssp             GEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCS
T ss_pred             ccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCe
Confidence             34579999999999888887322 456788999999999888543                                  


Q ss_pred             ----eEEEEeCCC--Cce-eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC---------CeEEEe
Q psy17682        281 ----KMRIINPRT--GAI-EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE---------PIVMVE  344 (490)
Q Consensus       281 ----~i~iwd~~~--~~~-~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~---------~~~~~~  344 (490)
                          .|.+.|.++  ++. +..+....  ...++.++|||++++++..  ....|.++|+.+.+.         ......
T Consensus       251 ~~i~~V~VID~~~~~~~~~~~~Ipvg~--~PhGv~~sPDGk~v~V~~~--~s~~VsVid~~~~~~~~~~~l~~~~~v~~~  326 (595)
T 1fwx_A          251 QELNGVKVVDGRKEASSLFTRYIPIAN--NPHGCNMAPDKKHLCVAGK--LSPTVTVLDVTRFDAVFYENADPRSAVVAE  326 (595)
T ss_dssp             EEETTEEEEECSGGGCCSSEEEEEEES--SCCCEEECTTSSEEEEECT--TSSBEEEEEGGGHHHHHHSCCCGGGGEEEC
T ss_pred             eEECcEEEEeCcccCCceeEEEEecCC--CceEEEEcCCCCEEEEeCC--CCCeEEEEECcccccccccccCcccceEEE
Confidence                477788877  444 44554333  2788999999998887763  578899999985421         112334


Q ss_pred             ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC------CCeeEEeeeeeCCCce------eeEEEeeCceeEEee
Q psy17682        345 LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE------PPFVHYINTFQTPDPQ------RGIGMMPKRGCDVNS  412 (490)
Q Consensus       345 ~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~------~~~~~~~~~~~~~~~i------~~~~~sp~~~~l~~~  412 (490)
                      .....+...++|+|+| ++|++.-.|+.|.+||+...      +.....+....-+...      .++.++|||++|++.
T Consensus       327 v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~  405 (595)
T 1fwx_A          327 PELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL  405 (595)
T ss_dssp             CBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred             cCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEc
Confidence            4555678999999999 88889999999999999872      1111233333322111      334668999999988


Q ss_pred             cc----ee-----------EEEEecCCCceEEE
Q psy17682        413 CE----IG-----------RFFRLNNSGLCQVV  430 (490)
Q Consensus       413 ~~----~~-----------~~~~~~~~~~~~~i  430 (490)
                      +.    .+           .++++..++ ++.+
T Consensus       406 Nk~skdr~~~~gp~~~~~~ql~dis~~~-m~lv  437 (595)
T 1fwx_A          406 SKFSKDRFLNVGPLKPENDQLIDISGDK-MVLV  437 (595)
T ss_dssp             ESCCTTSSCCCCSSCCEEEEEEECSSSS-CEEE
T ss_pred             CCCCccccccCCCCCCCcceEEEcCCCc-EEEE
Confidence            54    22           788887666 4433

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.21  E-value=9.6e-10  Score=103.15  Aligned_cols=206  Identities=11%  Similarity=-0.022  Sum_probs=131.9

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeC-----CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe--
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSE-----DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG--  235 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~--  235 (490)
                      +|-..+.++++++++ +++++-..     ++.|.+||+.+++.+..+..+.. ...+...+..+++++++..++++..  
T Consensus        64 ~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~-~~~~~~~~~~v~vd~~~g~~yvtd~~~  141 (343)
T 2qe8_A           64 ITFDTVLGIKSDGNG-IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPP-ITLSNSFVNDLAVDLIHNFVYISDPAP  141 (343)
T ss_dssp             CCCSCEEEEEECSSS-EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTT-TSCTTCCCCEEEEETTTTEEEEEECCS
T ss_pred             cceeEeeEEEEcCCC-cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChh-hcccccccceEEEecCCCEEEEEcCcc
Confidence            466789999999987 55555433     57899999988876554432110 1123345789999987544556655  


Q ss_pred             -CCCcEEEEECCCCeeEEEEecC-----------------------------CCcEEEEEEcCCCCEEEEEeCCC-eEEE
Q psy17682        236 -SDNNVAIWNVGTGEIMIQIECH-----------------------------PDIVYSASWNWDGSKLLTTCKDK-KMRI  284 (490)
Q Consensus       236 -~dg~v~iwd~~~~~~~~~~~~~-----------------------------~~~v~~~~~~~~~~~l~~~~~dg-~i~i  284 (490)
                       .++.|.+||+.+++....+..|                             ...+..++|+|+++.|+.+..++ .++.
T Consensus       142 ~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~  221 (343)
T 2qe8_A          142 DDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYR  221 (343)
T ss_dssp             GGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEE
T ss_pred             CCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEE
Confidence             5789999999888766555332                             12368899999999888887665 5555


Q ss_pred             EeCC---CCc-----eee--eeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeee
Q psy17682        285 INPR---TGA-----IEE--EAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFP  354 (490)
Q Consensus       285 wd~~---~~~-----~~~--~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~  354 (490)
                      ++..   .+.     ...  ...++.+ ....++++++|.++++..   ..+.|.+||..+++ ...+...........+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~g~~g-~pdgia~d~~G~l~va~~---~~~~V~~~d~~~G~-~~~~~~~~~~~~p~~v  296 (343)
T 2qe8_A          222 IKSADLSNLQLTDAELGSKIERYSEKP-ICDGISIDKDHNIYVGDL---AHSAIGVITSADRA-YKLLVTDEKLSWTDSF  296 (343)
T ss_dssp             EEHHHHTCTTCCHHHHHTTCEEEEECC-SCSCEEECTTCCEEEEEG---GGTEEEEEETTTTE-EEEEEECGGGSCEEEE
T ss_pred             EEHHHhcCCCCChhhhhcceEecccCC-CCceEEECCCCCEEEEcc---CCCeEEEEECCCCC-EEEEEECCceecCCee
Confidence            5532   111     001  1112333 367789999999888876   67899999984433 1222222223457899


Q ss_pred             eecCCCCeEEEEecCCCeEEEE
Q psy17682        355 LYDPDTNLVYLCGKGDSVIRYF  376 (490)
Q Consensus       355 ~~s~~~~~l~~~g~~dg~i~iw  376 (490)
                      +|+++++++ ++.+..+.+.+|
T Consensus       297 a~~~~g~l~-v~~~~~~~~~~f  317 (343)
T 2qe8_A          297 NFGSDGYLY-FDCNQLHHSAPL  317 (343)
T ss_dssp             EECTTSCEE-EEECCGGGSGGG
T ss_pred             EECCCCcEE-EEeCcccccccc
Confidence            999998765 565544444333

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.21  E-value=2e-08  Score=93.43  Aligned_cols=228  Identities=11%  Similarity=0.055  Sum_probs=140.0

Q ss_pred             cceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccc
Q psy17682         44 QRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYV  123 (490)
Q Consensus        44 ~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  123 (490)
                      ..-..+..|+|++..++++...++.|..||..++...                .. ..        ...+.+++++++. 
T Consensus        48 ~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~----------------~~-~~--------~~~v~~i~~~~dg-  101 (326)
T 2ghs_A           48 MLLGEGPTFDPASGTAWWFNILERELHELHLASGRKT----------------VH-AL--------PFMGSALAKISDS-  101 (326)
T ss_dssp             CSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE----------------EE-EC--------SSCEEEEEEEETT-
T ss_pred             CCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE----------------EE-EC--------CCcceEEEEeCCC-
Confidence            3446788999987678888878899999998875410                00 00        1146677888774 


Q ss_pred             cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceee-c-ccCCeeEEEECCCCCCEEEEEeCC----CcEEEEECCC
Q psy17682        124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVG-G-HKGPVLDIAWSPHDDNVIASGSED----CVVKVWQIPD  197 (490)
Q Consensus       124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~-~-h~~~V~~~~~~p~~~~~l~s~~~d----g~i~iwd~~~  197 (490)
                          .+++ +.. ..+.+|+..     .++.. .+.... + ....+.+++++|+| +++++...+    +...||.+.+
T Consensus       102 ----~l~v-~~~-~gl~~~d~~-----~g~~~-~~~~~~~~~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~~  168 (326)
T 2ghs_A          102 ----KQLI-ASD-DGLFLRDTA-----TGVLT-LHAELESDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVAK  168 (326)
T ss_dssp             ----EEEE-EET-TEEEEEETT-----TCCEE-EEECSSTTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEET
T ss_pred             ----eEEE-EEC-CCEEEEECC-----CCcEE-EEeeCCCCCCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEeC
Confidence                1222 223 347788763     22211 000010 1 12458899999998 565554321    2234444433


Q ss_pred             CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC--CC-e-----eEEEEecCCCcEEEEEEcCC
Q psy17682        198 GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG--TG-E-----IMIQIECHPDIVYSASWNWD  269 (490)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~--~~-~-----~~~~~~~~~~~v~~~~~~~~  269 (490)
                      ++. ..+       ..+......++|+|+++.++++.+.++.|.+||+.  ++ +     ....+.........+++.++
T Consensus       169 g~~-~~~-------~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~  240 (326)
T 2ghs_A          169 GKV-TKL-------FADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAE  240 (326)
T ss_dssp             TEE-EEE-------EEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTT
T ss_pred             CcE-EEe-------eCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCC
Confidence            322 211       11334567899999996444555567899999986  55 3     12223233456788999999


Q ss_pred             CCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEe-CCCcEEEEEe
Q psy17682        270 GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYL-KSGLIFTTGF  320 (490)
Q Consensus       270 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~l~~~~  320 (490)
                      |+++++...++.|.+||. +++.+..+..+.. .+.+++|+ +++..|.+++
T Consensus       241 G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~-~~~~~af~g~d~~~L~vt~  290 (326)
T 2ghs_A          241 GHIWNARWGEGAVDRYDT-DGNHIARYEVPGK-QTTCPAFIGPDASRLLVTS  290 (326)
T ss_dssp             SCEEEEEETTTEEEEECT-TCCEEEEEECSCS-BEEEEEEESTTSCEEEEEE
T ss_pred             CCEEEEEeCCCEEEEECC-CCCEEEEEECCCC-CcEEEEEecCCCCEEEEEe
Confidence            988777777789999998 5676666665443 48999998 8876655443

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.21  E-value=5.5e-10  Score=104.62  Aligned_cols=210  Identities=9%  Similarity=-0.006  Sum_probs=129.6

Q ss_pred             eeEEEECCCCCCEEEEEeC--CCcEEE--EECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEE
Q psy17682        168 VLDIAWSPHDDNVIASGSE--DCVVKV--WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIW  243 (490)
Q Consensus       168 V~~~~~~p~~~~~l~s~~~--dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iw  243 (490)
                      ...++++|+| ++++++..  +..+.+  +|+.+   +..+..        .+ +  ....|+++..+++.+.|+.+.+.
T Consensus       126 P~~ia~SpDG-k~lyVan~~~~~~v~V~~iD~~t---v~~i~v--------~~-~--~~~~p~g~~~~~~~~~dg~~~~v  190 (368)
T 1mda_H          126 VHIIGNCASS-ACLLFFLFGSSAAAGLSVPGASD---DQLTKS--------AS-C--FHIHPGAAATHYLGSCPASLAAS  190 (368)
T ss_dssp             TTSEEECTTS-SCEEEEECSSSCEEEEEETTTEE---EEEEEC--------SS-C--CCCEEEETTEEECCCCTTSCEEE
T ss_pred             cceEEEcCCC-CEEEEEccCCCCeEEEEEEchhh---ceEEEC--------CC-c--eEEccCCCeEEEEEcCCCCEEEE
Confidence            4468999999 56666653  457888  88866   233221        11 1  22356666677777888999888


Q ss_pred             ECCC-----CeeEEE----EecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eeeeeee------cCCCc---
Q psy17682        244 NVGT-----GEIMIQ----IECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGA--IEEEAVC------HEGSK---  303 (490)
Q Consensus       244 d~~~-----~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~------~~~~~---  303 (490)
                      |+.+     ++....    +.....+.   . .+++..++..+. +.+.+.|+.+..  .+..+..      ..+..   
T Consensus       191 d~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g  265 (368)
T 1mda_H          191 DLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAG  265 (368)
T ss_dssp             ECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECS
T ss_pred             ECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCc
Confidence            9876     433211    11122333   3 666666666666 999999997543  2222211      01100   


Q ss_pred             eeEEEEeCCCcEEEEEeC-C-Cc----eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEec-CCCeEEEE
Q psy17682        304 ATRAIYLKSGLIFTTGFS-K-MS----ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK-GDSVIRYF  376 (490)
Q Consensus       304 ~~~~~~s~~~~~l~~~~~-~-~~----~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~-~dg~i~iw  376 (490)
                      ...++++|+++.+.++.. . +.    ...+.++|+.+.+.   +..+........++|+|||++++++.. .++.|.++
T Consensus       266 ~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v---v~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVI  342 (368)
T 1mda_H          266 FQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT---SGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIY  342 (368)
T ss_dssp             SSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE---EECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred             ceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeE---EEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEE
Confidence            122689999887776542 1 10    23455999998753   233332336889999999998777777 69999999


Q ss_pred             EecCCCCeeEEeeeeeCCCceeeEEEee
Q psy17682        377 EITAEPPFVHYINTFQTPDPQRGIGMMP  404 (490)
Q Consensus       377 d~~~~~~~~~~~~~~~~~~~i~~~~~sp  404 (490)
                      |+.+.+    .+..+.-+....++++.+
T Consensus       343 D~~t~k----vv~~I~vg~~P~~i~~~~  366 (368)
T 1mda_H          343 DAASDQ----DQSSVELDKGPESLSVQN  366 (368)
T ss_dssp             ESSSCE----EEEECCCCSCCCEEECCC
T ss_pred             ECCCCc----EEEEEECCCCCCEEEeec
Confidence            999987    444445445556666654

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.18  E-value=1.1e-08  Score=90.60  Aligned_cols=201  Identities=9%  Similarity=0.005  Sum_probs=141.9

Q ss_pred             CeeEEEECCCCCCEEEEEeC--CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682        167 PVLDIAWSPHDDNVIASGSE--DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN  244 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd  244 (490)
                      ....+.|+|++ .++++.+.  ++.|++.|+.+++.+..+..     . .......+++.  ++.+.++.-.++.+.++|
T Consensus        22 f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l-----~-~~~fgeGi~~~--g~~lyv~t~~~~~v~viD   92 (266)
T 2iwa_A           22 FTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKM-----D-DSYFGEGLTLL--NEKLYQVVWLKNIGFIYD   92 (266)
T ss_dssp             CEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEEC-----C-TTCCEEEEEEE--TTEEEEEETTCSEEEEEE
T ss_pred             CcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEec-----C-CCcceEEEEEe--CCEEEEEEecCCEEEEEE
Confidence            36799999986 55555543  57999999999998776542     1 11222345554  444566666689999999


Q ss_pred             CCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCC----CceeEEEEeCCCcEEEEEe
Q psy17682        245 VGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEG----SKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       245 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~l~~~~  320 (490)
                      ..+.+.+.++......  ...+++||+.++++..++.|.++|..+.+....+.....    ..+..+.|. +|++++...
T Consensus        93 ~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~  169 (266)
T 2iwa_A           93 RRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIW  169 (266)
T ss_dssp             TTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred             CCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecC
Confidence            9999999988633121  233556788777777889999999999988887763221    125677888 787666654


Q ss_pred             CCCceeEEEEecCCCCCCCeEEEecc-----------CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        321 SKMSERQYSLRAPDHLDEPIVMVELD-----------TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       321 ~~~~~~~i~iwd~~~~~~~~~~~~~~-----------~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                         ..+.|.+.|..+++....+....           .......++|+|+++.+|+++...+.+.+.++....
T Consensus       170 ---~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~  239 (266)
T 2iwa_A          170 ---QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR  239 (266)
T ss_dssp             ---TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred             ---CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence               46789999999876433332211           012458999999999999999999999999987653

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.17  E-value=4.5e-08  Score=100.30  Aligned_cols=215  Identities=12%  Similarity=0.024  Sum_probs=136.3

Q ss_pred             CCcEEEEECCCCCccccccc-c---eeee--------------------cccccCEEEEEEeeCCCCEEEEEeCCCc---
Q psy17682        187 DCVVKVWQIPDGGISRTLTE-P---VVDL--------------------LYHQRRVGLVLWHPTAQNVLLTAGSDNN---  239 (490)
Q Consensus       187 dg~i~iwd~~~~~~~~~~~~-~---~~~~--------------------~~~~~~v~~~~~~p~~~~~l~s~~~dg~---  239 (490)
                      +|.|..||.++|+.+..+.. +   ....                    .++......+++.|+.. +++.+..++.   
T Consensus       182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~-~vy~~~~~g~~w~  260 (689)
T 1yiq_A          182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELN-LLYIGVGNGSLWD  260 (689)
T ss_dssp             BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSC
T ss_pred             CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCC-EEEEeCCCCCccc
Confidence            78999999999998765532 1   0000                    01111123578888874 7888877753   


Q ss_pred             ----------------EEEEECCCCeeEEEEec--CC-------CcEEEEEEcCCCC---EEEEEeCCCeEEEEeCCCCc
Q psy17682        240 ----------------VAIWNVGTGEIMIQIEC--HP-------DIVYSASWNWDGS---KLLTTCKDKKMRIINPRTGA  291 (490)
Q Consensus       240 ----------------v~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~  291 (490)
                                      |..+|.++|+.+..++.  |.       .+........+|+   .++.++.+|.++++|.++++
T Consensus       261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~  340 (689)
T 1yiq_A          261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGE  340 (689)
T ss_dssp             HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred             cCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCC
Confidence                            99999999999988874  21       1222222223564   78889999999999999999


Q ss_pred             eeeeeeecC--------------------------------------CCceeEEEEeCCCcEEEEEeCC-----------
Q psy17682        292 IEEEAVCHE--------------------------------------GSKATRAIYLKSGLIFTTGFSK-----------  322 (490)
Q Consensus       292 ~~~~~~~~~--------------------------------------~~~~~~~~~s~~~~~l~~~~~~-----------  322 (490)
                      .+.......                                      +.....++++|+..++.+...+           
T Consensus       341 ~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~  420 (689)
T 1yiq_A          341 LLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEA  420 (689)
T ss_dssp             EEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSC
T ss_pred             EeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccc
Confidence            874332110                                      0011237889887777665311           


Q ss_pred             ------------C-------------------ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC
Q psy17682        323 ------------M-------------------SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS  371 (490)
Q Consensus       323 ------------~-------------------~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg  371 (490)
                                  +                   .++.|..||+.+++......   .........+...+..+ +.|+.||
T Consensus       421 ~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~---~~~~~~~g~~~tagglv-f~gt~dg  496 (689)
T 1yiq_A          421 PKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVP---YVTIFNGGTLSTAGNLV-FEGSADG  496 (689)
T ss_dssp             CCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEE---ESSSCCCCEEEETTTEE-EEECTTS
T ss_pred             ccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEcc---CCCCccCccceECCCEE-EEECCCC
Confidence                        0                   14889999999876433322   22333334556677777 5688999


Q ss_pred             eEEEEEecCCCCeeEEeeeeeCC--CceeeEEEeeCceeEE
Q psy17682        372 VIRYFEITAEPPFVHYINTFQTP--DPQRGIGMMPKRGCDV  410 (490)
Q Consensus       372 ~i~iwd~~~~~~~~~~~~~~~~~--~~i~~~~~sp~~~~l~  410 (490)
                      .++.||.++++.    +..+..+  ....-+.|..+|+..+
T Consensus       497 ~l~a~D~~tG~~----lw~~~~~~~~~~~p~ty~~~G~qyv  533 (689)
T 1yiq_A          497 RVIAYAADTGEK----LWEQPAASGVMAAPVTYSVDGEQYV  533 (689)
T ss_dssp             EEEEEETTTCCE----EEEEECSSCCCSCCEEEEETTEEEE
T ss_pred             cEEEEECCCCcc----ceeeeCCCCcccCceEEEECCEEEE
Confidence            999999999983    3333322  2234577888886433

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.17  E-value=2.8e-11  Score=114.69  Aligned_cols=201  Identities=13%  Similarity=0.054  Sum_probs=110.1

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCC
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHP  258 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~  258 (490)
                      ..+++++.||.|..||..+|+.+..+..         ..+.+..+..++. ++++++.|+.|+.||..+++.+..+..+.
T Consensus        10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~---------~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~~w~~~~~~   79 (369)
T 2hz6_A           10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE---------DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEGLTKLPFTI   79 (369)
T ss_dssp             TEEEEEETTSEEEEEETTTCCEEEEEEC---------CCSCCCC-----C-CEEECTTTCCEEEC-----CCSEECSCCH
T ss_pred             CEEEEEcCCCEEEEEECCCCCEEEEecC---------CCceecceEcCCC-EEEEeCCCCEEEEEECCCCceeeeeeccC
Confidence            6899999999999999999988765431         2333444455664 67777899999999999998777665321


Q ss_pred             Cc-EE-EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC
Q psy17682        259 DI-VY-SASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL  336 (490)
Q Consensus       259 ~~-v~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~  336 (490)
                      .. +. +..+. .+..+++++.++.++.||.++++.+..+..+..     ..++|++..+++++   .++.|+.||.+++
T Consensus        80 ~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~-----~~~~p~~~~v~~~~---~dg~v~a~d~~tG  150 (369)
T 2hz6_A           80 PELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA-----DSLSPSTSLLYLGR---TEYTITMYDTKTR  150 (369)
T ss_dssp             HHHHTTCSCC------CCCCEEEEEEEEECCC---------------------------EEEEE---EEEEEECCCSSSS
T ss_pred             ccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc-----ccccccCCEEEEEe---cCCEEEEEECCCC
Confidence            10 10 00111 345677888899999999999998877764431     23456777777776   6899999999987


Q ss_pred             CCCeEEEeccCCCceeeeeecCCC---CeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceee-EEEeeCce
Q psy17682        337 DEPIVMVELDTSNGVMFPLYDPDT---NLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRG-IGMMPKRG  407 (490)
Q Consensus       337 ~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~-~~~sp~~~  407 (490)
                      +........    ....++++++.   ..+ ++++.||.|+.||..+++.    +..+....++.. ..+++++.
T Consensus       151 ~~~W~~~~~----~~~~~~~~~~~~~~~~v-~~~~~dg~v~a~d~~tG~~----~W~~~~~~pv~~~~~~~~dg~  216 (369)
T 2hz6_A          151 ELRWNATYF----DYAASLPEDDVDYKMSH-FVSNGDGLVVTVDSESGDV----LWIQNYASPVVAFYVWQREGL  216 (369)
T ss_dssp             SCCCEEEEE----EECCBCCCCCTTCCCCE-EEEETSCEEEEECTTTCCE----EEEEECSSCEEEEEECTTSSC
T ss_pred             CEEEeEecc----cccCccccCCccccceE-EEECCCCEEEEEECCCCcE----EEEecCCCceEEEEEecCCce
Confidence            755443321    12334444432   455 4577899999999999873    333333445433 45556664

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.13  E-value=7.7e-09  Score=97.34  Aligned_cols=196  Identities=10%  Similarity=0.010  Sum_probs=133.1

Q ss_pred             eCCCCEEEEEeCCCcEEEEECCCC----eeEEEEe-------cCCCcEEEEEEcCCCCEEEEEeCC------CeEEEEeC
Q psy17682        225 PTAQNVLLTAGSDNNVAIWNVGTG----EIMIQIE-------CHPDIVYSASWNWDGSKLLTTCKD------KKMRIINP  287 (490)
Q Consensus       225 p~~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~  287 (490)
                      ++++.+++++..++.|.++|+.+.    +....++       ........+...|+| .++++..+      |.+.++|.
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~  171 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH  171 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence            777767777888899999998755    5666662       112245678889999 77766555      78999999


Q ss_pred             CCCceeeeeeecCC--CceeEEEEeCCCcEEEEEeC-------C---------CceeEEEEecCCCCCCCeEEEecc-CC
Q psy17682        288 RTGAIEEEAVCHEG--SKATRAIYLKSGLIFTTGFS-------K---------MSERQYSLRAPDHLDEPIVMVELD-TS  348 (490)
Q Consensus       288 ~~~~~~~~~~~~~~--~~~~~~~~s~~~~~l~~~~~-------~---------~~~~~i~iwd~~~~~~~~~~~~~~-~~  348 (490)
                      .+.+.+.++.....  ...+.+.|+|+++.+++..-       .         .....|.+||+.+.+ .......+ ..
T Consensus       172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k-~~~tI~vg~~g  250 (462)
T 2ece_A          172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK-RIHSLTLGEEN  250 (462)
T ss_dssp             TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE-EEEEEESCTTE
T ss_pred             CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc-EeeEEecCCCC
Confidence            99999988873322  22456888999998887730       0         136889999999753 22222222 11


Q ss_pred             Cceeee--eecCCCCeEEEEec-----CCCeEEEEEecCCCCeeEEeeee--eC-----------------CCceeeEEE
Q psy17682        349 NGVMFP--LYDPDTNLVYLCGK-----GDSVIRYFEITAEPPFVHYINTF--QT-----------------PDPQRGIGM  402 (490)
Q Consensus       349 ~~i~~~--~~s~~~~~l~~~g~-----~dg~i~iwd~~~~~~~~~~~~~~--~~-----------------~~~i~~~~~  402 (490)
                      .....+  +|+|+++++|+++-     .+++|.+|....++ + ......  ..                 ......+.+
T Consensus       251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~-~-~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~l  328 (462)
T 2ece_A          251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK-W-NAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDI  328 (462)
T ss_dssp             EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-E-EEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEE
T ss_pred             CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-e-eEEEEEeCCCccccccccccccccccCCCceeEEEE
Confidence            234445  45999999988877     78899888876542 1 111110  00                 235788999


Q ss_pred             eeCceeEEeec---ceeEEEEecCC
Q psy17682        403 MPKRGCDVNSC---EIGRFFRLNNS  424 (490)
Q Consensus       403 sp~~~~l~~~~---~~~~~~~~~~~  424 (490)
                      ||||++|..++   +.+.+|++.+.
T Consensus       329 S~DGrfLYVSnrg~d~VavfdV~d~  353 (462)
T 2ece_A          329 SLDDKFLYLSLWGIGEVRQYDISNP  353 (462)
T ss_dssp             CTTSCEEEEEETTTTEEEEEECSST
T ss_pred             CCCCCEEEEEeCCCCEEEEEEecCC
Confidence            99999888773   48889998643

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.10  E-value=1.2e-07  Score=97.09  Aligned_cols=215  Identities=8%  Similarity=-0.018  Sum_probs=138.7

Q ss_pred             CCcEEEEECCCCCcccccccceeee----------------c---------ccccCEEEEEEeeCCCCEEEEEeCCC---
Q psy17682        187 DCVVKVWQIPDGGISRTLTEPVVDL----------------L---------YHQRRVGLVLWHPTAQNVLLTAGSDN---  238 (490)
Q Consensus       187 dg~i~iwd~~~~~~~~~~~~~~~~~----------------~---------~~~~~v~~~~~~p~~~~~l~s~~~dg---  238 (490)
                      +|.|+.+|..+++.+..+.......                .         +.......++++|++. +++.+..++   
T Consensus       189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~-~vy~~~~~~~~w  267 (677)
T 1kb0_A          189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELN-TMYVGTGNGSPW  267 (677)
T ss_dssp             BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESS
T ss_pred             CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCC-EEEEECCCCccc
Confidence            7899999999998876553211000                0         1111223578888875 777776653   


Q ss_pred             ----------------cEEEEECCCCeeEEEEec--CC-------CcEEEEEEcCCC---CEEEEEeCCCeEEEEeCCCC
Q psy17682        239 ----------------NVAIWNVGTGEIMIQIEC--HP-------DIVYSASWNWDG---SKLLTTCKDKKMRIINPRTG  290 (490)
Q Consensus       239 ----------------~v~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~  290 (490)
                                      .|..+|.++|+.+..++.  |.       ....-+....+|   ..++.++.+|.++++|.+++
T Consensus       268 ~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG  347 (677)
T 1kb0_A          268 SHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNG  347 (677)
T ss_dssp             CHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred             cCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCC
Confidence                            599999999999988763  21       112223333467   68899999999999999999


Q ss_pred             ceeeeeeecC----------CCc------------------------eeEEEEeCCCcEEEEEeCC-------------C
Q psy17682        291 AIEEEAVCHE----------GSK------------------------ATRAIYLKSGLIFTTGFSK-------------M  323 (490)
Q Consensus       291 ~~~~~~~~~~----------~~~------------------------~~~~~~s~~~~~l~~~~~~-------------~  323 (490)
                      +.+.......          +.+                        ...++++|++.++.+...+             +
T Consensus       348 ~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g  427 (677)
T 1kb0_A          348 KFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFN  427 (677)
T ss_dssp             CEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTT
T ss_pred             CEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccc
Confidence            9887664211          000                        1256889987777665321             0


Q ss_pred             ---------------------------ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEE
Q psy17682        324 ---------------------------SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYF  376 (490)
Q Consensus       324 ---------------------------~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iw  376 (490)
                                                 ..+.|..||+.+++.....   .+...+....+..++..+ +.++.||.+++|
T Consensus       428 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~---~~~~~~~~g~~~~~g~~v-~~g~~dg~l~a~  503 (677)
T 1kb0_A          428 QAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSV---EHVSPWNGGTLTTAGNVV-FQGTADGRLVAY  503 (677)
T ss_dssp             CCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEE---EESSSCCCCEEEETTTEE-EEECTTSEEEEE
T ss_pred             cccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeec---CCCCCCcCcceEeCCCEE-EEECCCCcEEEE
Confidence                                       1388999999987643322   233344555566778887 457899999999


Q ss_pred             EecCCCCeeEEeeeeeCC--CceeeEEEeeCceeEE
Q psy17682        377 EITAEPPFVHYINTFQTP--DPQRGIGMMPKRGCDV  410 (490)
Q Consensus       377 d~~~~~~~~~~~~~~~~~--~~i~~~~~sp~~~~l~  410 (490)
                      |..+++.    +..+..+  ....-+.+..+|+..+
T Consensus       504 D~~tG~~----lw~~~~~~~~~~~p~~y~~~G~~~v  535 (677)
T 1kb0_A          504 HAATGEK----LWEAPTGTGVVAAPSTYMVDGRQYV  535 (677)
T ss_dssp             ETTTCCE----EEEEECSSCCCSCCEEEEETTEEEE
T ss_pred             ECCCCce----eeeeeCCCCcccCCEEEEeCCEEEE
Confidence            9999983    3333322  2334566778886433

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.06  E-value=3.4e-07  Score=82.29  Aligned_cols=223  Identities=6%  Similarity=-0.041  Sum_probs=140.4

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEEC
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNV  245 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~  245 (490)
                      ..+.+++|+++++.++++-...+.|..++.........       .........++++++++.+++++-...+.|.++++
T Consensus        36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~-------~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~  108 (267)
T 1npe_A           36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTI-------IRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKM  108 (267)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEE-------ECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEE-------EECCCCCccEEEEEecCCeEEEEECCCCEEEEEEc
Confidence            45789999997656666666788999999865543211       11122467899999976556666666789999998


Q ss_pred             CCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC---CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCC
Q psy17682        246 GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK---DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSK  322 (490)
Q Consensus       246 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~  322 (490)
                      ..................++++|++..|..+..   .+.|..+++.... ...+..........+++++++..|..+.. 
T Consensus       109 ~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~-  186 (267)
T 1npe_A          109 DGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDA-  186 (267)
T ss_dssp             TSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEET-
T ss_pred             CCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEEC-
Confidence            643322222222356789999997665555543   3688888876432 23332112224789999998665544432 


Q ss_pred             CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC--CceeeE
Q psy17682        323 MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP--DPQRGI  400 (490)
Q Consensus       323 ~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~i~~~  400 (490)
                       ..+.|..+|...... ....  ........++.  ++..|+++....+.|.++|..+++    .+..+..+  ....++
T Consensus       187 -~~~~I~~~~~~g~~~-~~~~--~~~~~P~gi~~--d~~~lyva~~~~~~v~~~d~~~g~----~~~~i~~g~~~~p~gi  256 (267)
T 1npe_A          187 -GTHRAECLNPAQPGR-RKVL--EGLQYPFAVTS--YGKNLYYTDWKTNSVIAMDLAISK----EMDTFHPHKQTRLYGI  256 (267)
T ss_dssp             -TTTEEEEEETTEEEE-EEEE--ECCCSEEEEEE--ETTEEEEEETTTTEEEEEETTTTE----EEEEECCSSCCCCCCE
T ss_pred             -CCCEEEEEecCCCce-EEEe--cCCCCceEEEE--eCCEEEEEECCCCeEEEEeCCCCC----ceEEEcccccccccee
Confidence             457899999875321 1111  12223345554  467777877778899999998876    22333222  146788


Q ss_pred             EEeeCce
Q psy17682        401 GMMPKRG  407 (490)
Q Consensus       401 ~~sp~~~  407 (490)
                      ++.|++.
T Consensus       257 ~~~~~~~  263 (267)
T 1npe_A          257 TIALSQC  263 (267)
T ss_dssp             EEECSCC
T ss_pred             eecCccC
Confidence            8888864

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.05  E-value=9.9e-09  Score=96.09  Aligned_cols=232  Identities=8%  Similarity=-0.082  Sum_probs=138.5

Q ss_pred             CEEEEEeCCC----cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe---------CCCcEEEEEC
Q psy17682        179 NVIASGSEDC----VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG---------SDNNVAIWNV  245 (490)
Q Consensus       179 ~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~---------~dg~v~iwd~  245 (490)
                      ..+++...++    +|.+.|..+++.+..+..       ...+  .+.++|+++.++++..         .++.|.+||+
T Consensus        33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~v-------G~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~  103 (368)
T 1mda_H           33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSLG-------AFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDP  103 (368)
T ss_dssp             EEEEEECTTTCSSEEEEEEETTTTEEEEEEEE-------CTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECT
T ss_pred             eEEEECCccCCccceEEEEECCCCeEEEEEeC-------CCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence            3444444455    888999999988776542       2234  7999999974444432         3688999999


Q ss_pred             CCCeeEEEEecC-------CCcEEEEEEcCCCCEEEEEeC--CCeEEE--EeCCCCceeeeeeecCCC------ceeEEE
Q psy17682        246 GTGEIMIQIECH-------PDIVYSASWNWDGSKLLTTCK--DKKMRI--INPRTGAIEEEAVCHEGS------KATRAI  308 (490)
Q Consensus       246 ~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~~~~~------~~~~~~  308 (490)
                      .+++.+.++...       ......++++|||++++++..  +..+.+  +|+.+   +.++......      .-.-+.
T Consensus       104 ~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~  180 (368)
T 1mda_H          104 VTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYL  180 (368)
T ss_dssp             TTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEEC
T ss_pred             CCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEE
Confidence            999999998643       123568999999999998875  467888  99876   3333211000      001122


Q ss_pred             EeCCCcEEEEEeCC-----C-----------------------------ceeEEEEecCCCCCCCeEEEeccC-------
Q psy17682        309 YLKSGLIFTTGFSK-----M-----------------------------SERQYSLRAPDHLDEPIVMVELDT-------  347 (490)
Q Consensus       309 ~s~~~~~l~~~~~~-----~-----------------------------~~~~i~iwd~~~~~~~~~~~~~~~-------  347 (490)
                      ++++|++++.-.+.     +                             . +.+.+.|...... .....+..       
T Consensus       181 ~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~-~v~~~~~~~~~~~~~  258 (368)
T 1mda_H          181 GSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGA-TMKAAIDGNESGRKA  258 (368)
T ss_dssp             CCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCC-EEECCCCSSCTHHHH
T ss_pred             EcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcc-eEEEEEEeccccccc
Confidence            33444433322210     0                             1 2344444432110 00110000       


Q ss_pred             ----CCceeeeeecCCCCeEEEEec---C-----CCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce-eEEee--
Q psy17682        348 ----SNGVMFPLYDPDTNLVYLCGK---G-----DSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG-CDVNS--  412 (490)
Q Consensus       348 ----~~~i~~~~~s~~~~~l~~~g~---~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~--  412 (490)
                          ..+...++++|+++.+|++..   .     ++.+.++|+.+.+    .+..+..+....+++|+|||+ ++++.  
T Consensus       259 ~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~----vv~~i~vg~~p~gi~~s~Dg~~l~va~~~  334 (368)
T 1mda_H          259 DNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ----TSGPISNGHDSDAIIAAQDGASDNYANSA  334 (368)
T ss_dssp             TTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC----EEECCEEEEEECEEEECCSSSCEEEEEET
T ss_pred             cccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe----EEEEEECCCCcceEEECCCCCEEEEEccC
Confidence                011122679999999987644   2     2356699999987    334444334689999999996 33433  


Q ss_pred             -cceeEEEEecCCCceE
Q psy17682        413 -CEIGRFFRLNNSGLCQ  428 (490)
Q Consensus       413 -~~~~~~~~~~~~~~~~  428 (490)
                       ++.+.++++.+.+.+.
T Consensus       335 ~~~~VsVID~~t~kvv~  351 (368)
T 1mda_H          335 GTEVLDIYDAASDQDQS  351 (368)
T ss_dssp             TTTEEEEEESSSCEEEE
T ss_pred             CCCeEEEEECCCCcEEE
Confidence             3578888888876443

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.03  E-value=4.4e-08  Score=95.60  Aligned_cols=240  Identities=6%  Similarity=-0.088  Sum_probs=159.3

Q ss_pred             EEEEEeCCCcEEEEECCCCCcccccccc--------------eeee--------------cc----cccCEEEEEEee--
Q psy17682        180 VIASGSEDCVVKVWQIPDGGISRTLTEP--------------VVDL--------------LY----HQRRVGLVLWHP--  225 (490)
Q Consensus       180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------------~~~~--------------~~----~~~~v~~~~~~p--  225 (490)
                      .|.||+..|.++++-+.+++.++.+..-              ...+              .+    ..+.......+.  
T Consensus        17 ~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~   96 (595)
T 1fwx_A           17 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTE   96 (595)
T ss_dssp             EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEET
T ss_pred             EEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCC
Confidence            4677888888999888887776554300              0000              00    011122244444  


Q ss_pred             ---CCCCEEEEEeCCCcEEEEECCCCeeEEEEec-CCCcEEEEEE-c-CCCCEEEEEe------------------CCCe
Q psy17682        226 ---TAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-HPDIVYSASW-N-WDGSKLLTTC------------------KDKK  281 (490)
Q Consensus       226 ---~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~v~~~~~-~-~~~~~l~~~~------------------~dg~  281 (490)
                         +|+.+++....+..|.+.|+.+.+....+.- .......+++ + |+++++++++                  .++.
T Consensus        97 g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~  176 (595)
T 1fwx_A           97 GKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV  176 (595)
T ss_dssp             TEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred             CCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence               7765566555677899999999998775441 3456888888 5 8999998885                  2457


Q ss_pred             EEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCce-----------------------------------e
Q psy17682        282 MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSE-----------------------------------R  326 (490)
Q Consensus       282 i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~-----------------------------------~  326 (490)
                      +.+.|..+.+...++.....  ...++++|+|+++.+.+.+...                                   +
T Consensus       177 vtvID~~t~~v~~qI~Vgg~--pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~  254 (595)
T 1fwx_A          177 FTAVDADKWEVAWQVLVSGN--LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN  254 (595)
T ss_dssp             EEEEETTTTEEEEEEEESSC--CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred             EEEEECCCCeEEEEEEeCCC--ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence            99999999988888875332  6778899999988887743211                                   1


Q ss_pred             EEEEecCCC--CCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC--------eeEEeeeeeCCCc
Q psy17682        327 QYSLRAPDH--LDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP--------FVHYINTFQTPDP  396 (490)
Q Consensus       327 ~i~iwd~~~--~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~--------~~~~~~~~~~~~~  396 (490)
                      .|.+.|.++  ......  .+........+.++|||+++++++..+.+|.++|+.+.+.        -.........+..
T Consensus       255 ~V~VID~~~~~~~~~~~--~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~g  332 (595)
T 1fwx_A          255 GVKVVDGRKEASSLFTR--YIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLG  332 (595)
T ss_dssp             TEEEEECSGGGCCSSEE--EEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSC
T ss_pred             cEEEEeCcccCCceeEE--EEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCC
Confidence            366666665  222111  1222234677899999999999999999999999996420        0012233344556


Q ss_pred             eeeEEEeeCceeEEee--cceeEEEEecC
Q psy17682        397 QRGIGMMPKRGCDVNS--CEIGRFFRLNN  423 (490)
Q Consensus       397 i~~~~~sp~~~~l~~~--~~~~~~~~~~~  423 (490)
                      ...++|+|+|...++.  ++.+..|++..
T Consensus       333 P~h~aF~~dG~aY~t~~ldsqV~kwdi~~  361 (595)
T 1fwx_A          333 PLHTAFDGRGNAYTSLFLDSQVVKWNIED  361 (595)
T ss_dssp             EEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred             cceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence            8999999999433333  56888899877

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.99  E-value=5.8e-08  Score=84.78  Aligned_cols=183  Identities=8%  Similarity=0.077  Sum_probs=126.3

Q ss_pred             eeEEEECCCCCCEEEEEeCCC--cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEEC
Q psy17682        168 VLDIAWSPHDDNVIASGSEDC--VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNV  245 (490)
Q Consensus       168 V~~~~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~  245 (490)
                      ...+.|+ ++ .++.+.+.+|  .|+++|+++++.+..+..+      ....-..++.  .++.+.+..-.++.+.+||.
T Consensus        45 tqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~------~~~FgeGit~--~g~~ly~ltw~~~~v~v~D~  114 (262)
T 3nol_A           45 TEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIELG------KRYFGEGISD--WKDKIVGLTWKNGLGFVWNI  114 (262)
T ss_dssp             EEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEECC------TTCCEEEEEE--ETTEEEEEESSSSEEEEEET
T ss_pred             cceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEEEecC------CccceeEEEE--eCCEEEEEEeeCCEEEEEEC
Confidence            4788898 55 7777777776  8999999999987765421      1111123444  34445555556899999999


Q ss_pred             CCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecC-C---CceeEEEEeCCCcEEEEEeC
Q psy17682        246 GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHE-G---SKATRAIYLKSGLIFTTGFS  321 (490)
Q Consensus       246 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~---~~~~~~~~s~~~~~l~~~~~  321 (490)
                      .+.+.+.++.....   ...++++++.|+.+..++.|.++|..+.+.+.++.... +   ..+..+.|. +|++++... 
T Consensus       115 ~t~~~~~ti~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w-  189 (262)
T 3nol_A          115 RNLRQVRSFNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVW-  189 (262)
T ss_dssp             TTCCEEEEEECSSC---CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEET-
T ss_pred             ccCcEEEEEECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEc-
Confidence            99999999884322   23334567777777778889999999999888876422 1   124557776 787776664 


Q ss_pred             CCceeEEEEecCCCCCCCeEEEec----------cCCCceeeeeecCCCCeEEEEe
Q psy17682        322 KMSERQYSLRAPDHLDEPIVMVEL----------DTSNGVMFPLYDPDTNLVYLCG  367 (490)
Q Consensus       322 ~~~~~~i~iwd~~~~~~~~~~~~~----------~~~~~i~~~~~s~~~~~l~~~g  367 (490)
                        ....|.+.|..+++....+...          ......+.++|+|+++.||++|
T Consensus       190 --~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG  243 (262)
T 3nol_A          190 --QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG  243 (262)
T ss_dssp             --TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred             --cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence              4678999999887643333221          0112458899999999998888

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.97  E-value=2.8e-06  Score=76.21  Aligned_cols=234  Identities=7%  Similarity=-0.030  Sum_probs=138.3

Q ss_pred             EEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCC
Q psy17682        180 VIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPD  259 (490)
Q Consensus       180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~  259 (490)
                      +|+.+.. +.|+.+++...... .+.. ...+......+.+++|++++..++++-..++.|..+++..+.....+.....
T Consensus         3 ~l~~~~~-~~I~~~~~~g~~~~-~~~~-~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~   79 (267)
T 1npe_A            3 HLLFAQT-GKIERLPLERNTMK-KTEA-KAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG   79 (267)
T ss_dssp             EEEEEEE-EEEEEEEESSSCBC-GGGC-EEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred             EEEEEcC-CeEEEEEecCcccc-cccc-eeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCC
Confidence            4444443 47888887654331 1110 0001112345789999997655666666678999999876554333333335


Q ss_pred             cEEEEEEcCCCCEEE-EEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCC
Q psy17682        260 IVYSASWNWDGSKLL-TTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLD  337 (490)
Q Consensus       260 ~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~  337 (490)
                      ....+++++++..|+ +-...+.|.++++..... ..+..........++++|+ +.++++.. ....+.|..++++...
T Consensus        80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~i~vd~~~g~lyv~~~-~~~~~~I~~~~~dg~~  157 (267)
T 1npe_A           80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDTGLVNPRGIVTDPVRGNLYWTDW-NRDNPKIETSHMDGTN  157 (267)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEETTTTEEEEEEC-CSSSCEEEEEETTSCC
T ss_pred             CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEEECCCCCccEEEEeeCCCEEEEEEC-CCCCcEEEEEecCCCC
Confidence            688999999765554 445578899999875432 2232222234789999996 55555443 1114678888876432


Q ss_pred             CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--e
Q psy17682        338 EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--I  415 (490)
Q Consensus       338 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~  415 (490)
                       ...+.. ........+++++++..||++-...+.|.+++..... .....   .......+++.. .+.+.++...  .
T Consensus       158 -~~~~~~-~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~---~~~~~P~gi~~d-~~~lyva~~~~~~  230 (267)
T 1npe_A          158 -RRILAQ-DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG-RRKVL---EGLQYPFAVTSY-GKNLYYTDWKTNS  230 (267)
T ss_dssp             -CEEEEC-TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE-EEEEE---ECCCSEEEEEEE-TTEEEEEETTTTE
T ss_pred             -cEEEEE-CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc-eEEEe---cCCCCceEEEEe-CCEEEEEECCCCe
Confidence             222221 2234578899999999998888888999999987543 11122   222334567665 4455555433  4


Q ss_pred             eEEEEecCCC
Q psy17682        416 GRFFRLNNSG  425 (490)
Q Consensus       416 ~~~~~~~~~~  425 (490)
                      +..++..+++
T Consensus       231 v~~~d~~~g~  240 (267)
T 1npe_A          231 VIAMDLAISK  240 (267)
T ss_dssp             EEEEETTTTE
T ss_pred             EEEEeCCCCC
Confidence            4445544444

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.93  E-value=4.9e-07  Score=92.46  Aligned_cols=190  Identities=10%  Similarity=0.039  Sum_probs=124.4

Q ss_pred             eEEEECCCCCCEEEEEeCCC-------------------cEEEEECCCCCccccccccee---eecccccCEEEEEEeeC
Q psy17682        169 LDIAWSPHDDNVIASGSEDC-------------------VVKVWQIPDGGISRTLTEPVV---DLLYHQRRVGLVLWHPT  226 (490)
Q Consensus       169 ~~~~~~p~~~~~l~s~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~p~  226 (490)
                      ..++++|++ .+++.+..++                   .|..+|.++++....+.....   .... ......+....+
T Consensus       246 ~~~~~d~~~-~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~-~~~p~l~~~~~d  323 (677)
T 1kb0_A          246 DSMTFDAEL-NTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTS-TQPMILADIKIA  323 (677)
T ss_dssp             SCEEEETTT-TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC-CSCCEEEEEEET
T ss_pred             cceeEcCCC-CEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccccc-CCCcEEEecccC
Confidence            467888887 6777776654                   599999999988766542100   0000 112223334446


Q ss_pred             CC--CEEEEEeCCCcEEEEECCCCeeEEEEecCC-----------CcE------------------------EEEEEcCC
Q psy17682        227 AQ--NVLLTAGSDNNVAIWNVGTGEIMIQIECHP-----------DIV------------------------YSASWNWD  269 (490)
Q Consensus       227 ~~--~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-----------~~v------------------------~~~~~~~~  269 (490)
                      |+  ..++.++.+|.+.++|.++|+.+..+....           ..+                        ..++++|+
T Consensus       324 G~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~  403 (677)
T 1kb0_A          324 GKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQ  403 (677)
T ss_dssp             TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETT
T ss_pred             CcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCC
Confidence            62  378899999999999999999887765221           011                        14688998


Q ss_pred             CCEEEEEeCC-------------------------------------------CeEEEEeCCCCceeeeeeecCCCceeE
Q psy17682        270 GSKLLTTCKD-------------------------------------------KKMRIINPRTGAIEEEAVCHEGSKATR  306 (490)
Q Consensus       270 ~~~l~~~~~d-------------------------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~  306 (490)
                      ..++++...+                                           |.|..||+.+++.+.++.....  ...
T Consensus       404 ~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~--~~~  481 (677)
T 1kb0_A          404 TGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSP--WNG  481 (677)
T ss_dssp             TTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSS--CCC
T ss_pred             CCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCC--CcC
Confidence            8887775432                                           7899999999998888764322  334


Q ss_pred             EEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEE
Q psy17682        307 AIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLC  366 (490)
Q Consensus       307 ~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  366 (490)
                      ..+...+.+++.++   .++.+++||.++++....+.. .......-+.|..+|+.+++.
T Consensus       482 g~~~~~g~~v~~g~---~dg~l~a~D~~tG~~lw~~~~-~~~~~~~p~~y~~~G~~~v~~  537 (677)
T 1kb0_A          482 GTLTTAGNVVFQGT---ADGRLVAYHAATGEKLWEAPT-GTGVVAAPSTYMVDGRQYVSV  537 (677)
T ss_dssp             CEEEETTTEEEEEC---TTSEEEEEETTTCCEEEEEEC-SSCCCSCCEEEEETTEEEEEE
T ss_pred             cceEeCCCEEEEEC---CCCcEEEEECCCCceeeeeeC-CCCcccCCEEEEeCCEEEEEE
Confidence            44566666777776   689999999999875443332 222223445667888765454

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.92  E-value=7.7e-06  Score=85.73  Aligned_cols=335  Identities=10%  Similarity=0.006  Sum_probs=189.1

Q ss_pred             ccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccc
Q psy17682         43 HQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDY  122 (490)
Q Consensus        43 H~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  122 (490)
                      +...|.++...+++ .+.+....+| +.+||..++.+..                ...............|.++...++.
T Consensus       213 ~~~~i~~i~~d~~g-~lwigt~~~G-l~~~~~~~~~~~~----------------~~~~~~~~~~l~~~~i~~i~~d~~g  274 (795)
T 4a2l_A          213 GTKQIQAILQQSPT-RIWVATEGAG-LFLINPKTKEIKN----------------YLHSPSNPKSISSNYIRSLAMDSQN  274 (795)
T ss_dssp             -CCCEEEEEEEETT-EEEEEEBSSC-EEEEETTTTEEEE----------------ECCCTTCTTSCSCSBEEEEEECTTS
T ss_pred             CCCeeEEEEEcCCC-CEEEEECCCC-eEEEeCCCCeEEE----------------eecCCCCccccCCCeEEEEEEcCCC
Confidence            34678888888877 5655443334 7788877643110                0000000001112346666665553


Q ss_pred             ccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCc----ceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC
Q psy17682        123 VKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADH----ALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG  198 (490)
Q Consensus       123 ~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~----~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~  198 (490)
                            .++.+... .+.+++..     .+......    ....-....|.++...++|  .|..|+.++-|..|+..++
T Consensus       275 ------~lWigt~~-Gl~~~~~~-----~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g--~lWigt~~~Gl~~~~~~~~  340 (795)
T 4a2l_A          275 ------RLWIGTFN-DLNIYHEG-----TDSFASYSSNPVENGSLSQRSVRSIFMDSQG--GMWLGTYFGGLNYYHPIRN  340 (795)
T ss_dssp             ------CEEEEESS-CEEEEETT-----TTEEEEECCCTTSTTSCSSSCEEEEEECTTS--CEEEEESSSCEEEECGGGG
T ss_pred             ------CEEEEeCC-hhheEcCC-----CCeEEEEecCCCCCCCCCCCcEEEEEEeCCc--CEEEEECCCCeEEeCCCcc
Confidence                  24444444 46666653     11110000    0001134679999999877  3666777778999986544


Q ss_pred             CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec--------CCCcEEEEEEcCCC
Q psy17682        199 GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC--------HPDIVYSASWNWDG  270 (490)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--------~~~~v~~~~~~~~~  270 (490)
                      .... +......-.-....|.++...++|.  |..|+.++-|..|+..+++.......        ....|.++...+++
T Consensus       341 ~~~~-~~~~~~~~~l~~~~V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g  417 (795)
T 4a2l_A          341 RFKN-IRNIPYKNSLSDNVVSCIVEDKDKN--LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKK  417 (795)
T ss_dssp             SSEE-ECCCTTSSSCSCSSEEEEEECTTSC--EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTT
T ss_pred             cceE-EcCCCCCCCCCCCeeEEEEECCCCC--EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCC
Confidence            3211 1100000001245699998888874  66677777799999877654332211        23568999998888


Q ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeeee---cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec--
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIEEEAVC---HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL--  345 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~--  345 (490)
                      +.|..|+.++-|..||..+++...-...   .....+.++...++|.+.+...     +.+.+||..+... ......  
T Consensus       418 ~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-----~Gl~~~~~~~~~~-~~~~~~~~  491 (795)
T 4a2l_A          418 SLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-----SALVRFNPEQRSF-TTIEKEKD  491 (795)
T ss_dssp             TEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-----SCEEEEETTTTEE-EECCBCTT
T ss_pred             CEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-----CceeEEeCCCCeE-EEcccccc
Confidence            8677788878899999987764332110   1123488888888888666542     3477888765421 111100  


Q ss_pred             ---cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEee--ee--eCCCceeeEEEeeCceeEEeecceeEE
Q psy17682        346 ---DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYIN--TF--QTPDPQRGIGMMPKRGCDVNSCEIGRF  418 (490)
Q Consensus       346 ---~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~--~~--~~~~~i~~~~~sp~~~~l~~~~~~~~~  418 (490)
                         -....|.++..+++|+.. +.. . +-+..|+..+++ + ....  ..  .....|.++...++|.+.+++.+-+..
T Consensus       492 ~~~~~~~~i~~i~~d~~g~lW-igt-~-~Gl~~~~~~~~~-~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~Gl~~  566 (795)
T 4a2l_A          492 GTPVVSKQITTLFRDSHKRLW-IGG-E-EGLSVFKQEGLD-I-QKASILPVSNVTKLFTNCIYEASNGIIWVGTREGFYC  566 (795)
T ss_dssp             CCBCCCCCEEEEEECTTCCEE-EEE-S-SCEEEEEEETTE-E-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESSCEEE
T ss_pred             ccccCCceEEEEEECCCCCEE-EEe-C-CceEEEeCCCCe-E-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCCCcee
Confidence               012458888899999876 333 3 458889988764 2 1110  00  122468888888888876665443444


Q ss_pred             EEecC
Q psy17682        419 FRLNN  423 (490)
Q Consensus       419 ~~~~~  423 (490)
                      |+..+
T Consensus       567 ~d~~~  571 (795)
T 4a2l_A          567 FNEKD  571 (795)
T ss_dssp             EETTT
T ss_pred             ECCCC
Confidence            44433

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.92  E-value=2.6e-07  Score=85.73  Aligned_cols=204  Identities=14%  Similarity=0.071  Sum_probs=129.9

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCC
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHP  258 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~  258 (490)
                      ..+..++.++.|..+|.. ++......       .....+.++...+++.  +..++.++.|..+|.. ++.+..+....
T Consensus       108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~-------~~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d~~-g~~~~~~~~~~  176 (330)
T 3hxj_A          108 DILYVTSMDGHLYAINTD-GTEKWRFK-------TKKAIYATPIVSEDGT--IYVGSNDNYLYAINPD-GTEKWRFKTND  176 (330)
T ss_dssp             TEEEEECTTSEEEEECTT-SCEEEEEE-------CSSCCCSCCEECTTSC--EEEECTTSEEEEECTT-SCEEEEEECSS
T ss_pred             CEEEEEecCCEEEEEcCC-CCEEEEEc-------CCCceeeeeEEcCCCE--EEEEcCCCEEEEECCC-CCEeEEEecCC
Confidence            467778888999999987 65543322       1333455666666663  6667788999999998 88777776555


Q ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC
Q psy17682        259 DIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE  338 (490)
Q Consensus       259 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~  338 (490)
                      ..+.++...+++..++ ++  +.|..+| .+++.......... .+.++...++|.+.+...    ++.+..+|.. +..
T Consensus       177 ~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~-~~~~~~~~~~g~l~v~t~----~~gl~~~~~~-g~~  246 (330)
T 3hxj_A          177 AITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYW-TVTRPAISEDGTIYVTSL----DGHLYAINPD-GTE  246 (330)
T ss_dssp             CCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSC-CCSCCEECTTSCEEEEET----TTEEEEECTT-SCE
T ss_pred             CceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCc-ceeceEECCCCeEEEEcC----CCeEEEECCC-CCE
Confidence            6677777877777554 44  8899999 77776666554333 377888888887776553    5667777743 232


Q ss_pred             CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCceeEEee
Q psy17682        339 PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGCDVNS  412 (490)
Q Consensus       339 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~  412 (490)
                      .... . .....+..+...+++...  .++.+|.|..+|. +++..    ..+. ....+.++...+++.+.+.+
T Consensus       247 ~~~~-~-~~~~~~~~~~~~~~g~l~--v~t~~ggl~~~d~-~g~~~----~~~~~~~~~~~~~~~d~~g~l~~gt  312 (330)
T 3hxj_A          247 KWRF-K-TGKRIESSPVIGNTDTIY--FGSYDGHLYAINP-DGTEK----WNFETGSWIIATPVIDENGTIYFGT  312 (330)
T ss_dssp             EEEE-E-CSSCCCSCCEECTTSCEE--EECTTCEEEEECT-TSCEE----EEEECSSCCCSCCEECTTCCEEEEC
T ss_pred             eEEe-e-CCCCccccceEcCCCeEE--EecCCCCEEEECC-CCcEE----EEEEcCCccccceEEcCCCEEEEEc
Confidence            1111 1 122224456666666544  4667888999985 55522    2222 23456677777777665544

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.91  E-value=5.1e-07  Score=78.19  Aligned_cols=186  Identities=11%  Similarity=0.092  Sum_probs=126.9

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCC--cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEE
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDC--VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIW  243 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iw  243 (490)
                      .-.-++.|++ + .++.+.+.+|  .|+.+|+++++.+..+..+     .+ ..-..++..  ++.+++..-.++.+.+|
T Consensus        21 ~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-----~~-~fgeGi~~~--~~~ly~ltw~~~~v~v~   90 (243)
T 3mbr_X           21 AFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRILQRAEVP-----PP-YFGAGIVAW--RDRLIQLTWRNHEGFVY   90 (243)
T ss_dssp             CCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEEEEEECC-----TT-CCEEEEEEE--TTEEEEEESSSSEEEEE
T ss_pred             cccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEEEEEeCC-----CC-cceeEEEEe--CCEEEEEEeeCCEEEEE
Confidence            3456899986 4 6777777754  8999999999987765421     11 111233443  44466666678999999


Q ss_pred             ECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCC----CceeEEEEeCCCcEEEEE
Q psy17682        244 NVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEG----SKATRAIYLKSGLIFTTG  319 (490)
Q Consensus       244 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~l~~~  319 (490)
                      |..+.+.+.++..... -..++  +++..|+.+..++.|.++|..+.+.+.++.....    ..+..+.+. +|++++..
T Consensus        91 D~~tl~~~~ti~~~~~-Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanv  166 (243)
T 3mbr_X           91 DLATLTPRARFRYPGE-GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANV  166 (243)
T ss_dssp             ETTTTEEEEEEECSSC-CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred             ECCcCcEEEEEeCCCC-ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEE
Confidence            9999999999984332 23444  5677777777789999999999998888773221    124566665 77777665


Q ss_pred             eCCCceeEEEEecCCCCCCCeEEEec-----------cCCCceeeeeecCCCCeEEEEec
Q psy17682        320 FSKMSERQYSLRAPDHLDEPIVMVEL-----------DTSNGVMFPLYDPDTNLVYLCGK  368 (490)
Q Consensus       320 ~~~~~~~~i~iwd~~~~~~~~~~~~~-----------~~~~~i~~~~~s~~~~~l~~~g~  368 (490)
                      .   ....|.+.|..+++....+...           ......+.++++|+++.||++|-
T Consensus       167 w---~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK  223 (243)
T 3mbr_X          167 W---LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK  223 (243)
T ss_dssp             T---TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred             C---CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence            4   3568889999887643333211           11124688999999999988883

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.91  E-value=4.8e-06  Score=78.88  Aligned_cols=224  Identities=10%  Similarity=0.054  Sum_probs=130.1

Q ss_pred             EEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccce
Q psy17682        129 EIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPV  208 (490)
Q Consensus       129 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  208 (490)
                      .+..+..++.+..++..     +++...   ...............  + ..++.++.++.|..+|..+++.........
T Consensus       105 ~v~v~~~~g~l~a~d~~-----tG~~~W---~~~~~~~~~~~p~~~--~-~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~  173 (376)
T 3q7m_A          105 HVYIGSEKAQVYALNTS-----DGTVAW---QTKVAGEALSRPVVS--D-GLVLIHTSNGQLQALNEADGAVKWTVNLDM  173 (376)
T ss_dssp             EEEEEETTSEEEEEETT-----TCCEEE---EEECSSCCCSCCEEE--T-TEEEEECTTSEEEEEETTTCCEEEEEECCC
T ss_pred             EEEEEcCCCEEEEEECC-----CCCEEE---EEeCCCceEcCCEEE--C-CEEEEEcCCCeEEEEECCCCcEEEEEeCCC
Confidence            35556677888888874     333211   111111111111222  3 478888899999999999998766543211


Q ss_pred             ee--ecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCc----EE---EEEEcC--CCCEEEEEe
Q psy17682        209 VD--LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDI----VY---SASWNW--DGSKLLTTC  277 (490)
Q Consensus       209 ~~--~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~----v~---~~~~~~--~~~~l~~~~  277 (490)
                      ..  ......    .... ++  .++.+..++.+..+|..+++.+.........    +.   .+.-.|  .+..++.++
T Consensus       174 ~~~~~~~~~~----~~~~-~~--~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~  246 (376)
T 3q7m_A          174 PSLSLRGESA----PTTA-FG--AAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALA  246 (376)
T ss_dssp             -----CCCCC----CEEE-TT--EEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEEC
T ss_pred             CceeecCCCC----cEEE-CC--EEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEe
Confidence            10  011111    1122 33  6778888999999999999988776532110    00   011112  356778888


Q ss_pred             CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeec
Q psy17682        278 KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYD  357 (490)
Q Consensus       278 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s  357 (490)
                      .++.+..+|.++++.+.....  .. ...+... ++ .+..++   .++.+..+|..+++........ .......+...
T Consensus       247 ~~g~l~~~d~~tG~~~w~~~~--~~-~~~~~~~-~~-~l~~~~---~~g~l~~~d~~tG~~~w~~~~~-~~~~~~~~~~~  317 (376)
T 3q7m_A          247 YNGNLTALDLRSGQIMWKREL--GS-VNDFIVD-GN-RIYLVD---QNDRVMALTIDGGVTLWTQSDL-LHRLLTSPVLY  317 (376)
T ss_dssp             TTSCEEEEETTTCCEEEEECC--CC-EEEEEEE-TT-EEEEEE---TTCCEEEEETTTCCEEEEECTT-TTSCCCCCEEE
T ss_pred             cCcEEEEEECCCCcEEeeccC--CC-CCCceEE-CC-EEEEEc---CCCeEEEEECCCCcEEEeeccc-CCCcccCCEEE
Confidence            899999999999988766542  21 3334333 34 444444   4778999999887632222111 11223333332


Q ss_pred             CCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        358 PDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       358 ~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                        +..| +.++.+|.+.++|..+++
T Consensus       318 --~~~l-~v~~~~g~l~~~d~~tG~  339 (376)
T 3q7m_A          318 --NGNL-VVGDSEGYLHWINVEDGR  339 (376)
T ss_dssp             --TTEE-EEECTTSEEEEEETTTCC
T ss_pred             --CCEE-EEEeCCCeEEEEECCCCc
Confidence              4566 467789999999999987

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.90  E-value=4e-07  Score=79.52  Aligned_cols=184  Identities=7%  Similarity=0.010  Sum_probs=129.5

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG  246 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~  246 (490)
                      -...+.|+.  +.++.+.+.+|.|+++|+++++.+..+ .+      ....-..+++  .++.+.+..-.++.+.+||..
T Consensus        56 ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~------~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~  124 (268)
T 3nok_A           56 FTQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-RL------GNIFAEGLAS--DGERLYQLTWTEGLLFTWSGM  124 (268)
T ss_dssp             CEEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-EC------TTCCEEEEEE--CSSCEEEEESSSCEEEEEETT
T ss_pred             ccceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-CC------CCcceeEEEE--eCCEEEEEEccCCEEEEEECC
Confidence            346888873  478888899999999999999887764 21      1111233444  444566666678999999999


Q ss_pred             CCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCC----CceeEEEEeCCCcEEEEEeCC
Q psy17682        247 TGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEG----SKATRAIYLKSGLIFTTGFSK  322 (490)
Q Consensus       247 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~l~~~~~~  322 (490)
                      +.+.+.++... ..-..++  ++++.|+.+..++.|.++|..+.+.+.++.....    ..+..+.|. +|++++...  
T Consensus       125 Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw--  198 (268)
T 3nok_A          125 PPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIW--  198 (268)
T ss_dssp             TTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET--
T ss_pred             cCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEEC--
Confidence            99999998843 2223444  5688888887889999999999998888763221    124667777 787776654  


Q ss_pred             CceeEEEEecCCCCCCCeEEEec-----------cCCCceeeeeecCCCCeEEEEec
Q psy17682        323 MSERQYSLRAPDHLDEPIVMVEL-----------DTSNGVMFPLYDPDTNLVYLCGK  368 (490)
Q Consensus       323 ~~~~~i~iwd~~~~~~~~~~~~~-----------~~~~~i~~~~~s~~~~~l~~~g~  368 (490)
                       ....|.+.|..+++....+...           ......+.++++|+++.||++|-
T Consensus       199 -~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK  254 (268)
T 3nok_A          199 -HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK  254 (268)
T ss_dssp             -TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred             -CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence             4678999999987643333221           01134688999999999988883

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.86  E-value=2e-05  Score=82.62  Aligned_cols=331  Identities=9%  Similarity=-0.013  Sum_probs=191.4

Q ss_pred             cceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccc
Q psy17682         44 QRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYV  123 (490)
Q Consensus        44 ~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  123 (490)
                      ...|.++...+++ .+.+.. .+ -|.+++..++.+..                ...............|.++...+++ 
T Consensus       262 ~~~i~~i~~d~~g-~lWigt-~~-Gl~~~~~~~~~~~~----------------~~~~~~~~~~l~~~~i~~i~~D~~g-  321 (795)
T 4a2l_A          262 SNYIRSLAMDSQN-RLWIGT-FN-DLNIYHEGTDSFAS----------------YSSNPVENGSLSQRSVRSIFMDSQG-  321 (795)
T ss_dssp             CSBEEEEEECTTS-CEEEEE-SS-CEEEEETTTTEEEE----------------ECCCTTSTTSCSSSCEEEEEECTTS-
T ss_pred             CCeEEEEEEcCCC-CEEEEe-CC-hhheEcCCCCeEEE----------------EecCCCCCCCCCCCcEEEEEEeCCc-
Confidence            3569999998888 555433 34 47888877643210                0000000111122346677666654 


Q ss_pred             cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcce----eecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682        124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHAL----VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG  199 (490)
Q Consensus       124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~----~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~  199 (490)
                           .++.+..++.+..++..     ..... .+..    -.-....|.++...++|  .|..|+.++-|..|+..+++
T Consensus       322 -----~lWigt~~~Gl~~~~~~-----~~~~~-~~~~~~~~~~l~~~~V~~i~~d~~g--~lWiGt~~~Gl~~~~~~~~~  388 (795)
T 4a2l_A          322 -----GMWLGTYFGGLNYYHPI-----RNRFK-NIRNIPYKNSLSDNVVSCIVEDKDK--NLWIGTNDGGLNLYNPITQR  388 (795)
T ss_dssp             -----CEEEEESSSCEEEECGG-----GGSSE-EECCCTTSSSCSCSSEEEEEECTTS--CEEEEESSSCEEEECTTTCC
T ss_pred             -----CEEEEECCCCeEEeCCC-----cccce-EEcCCCCCCCCCCCeeEEEEECCCC--CEEEEECCCCeEEEcCCCCc
Confidence                 46667776777777653     11110 0000    00124569999998877  35667778789999977665


Q ss_pred             cccccccceeee-cccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-----cCCCcEEEEEEcCCCCEE
Q psy17682        200 ISRTLTEPVVDL-LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-----CHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       200 ~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l  273 (490)
                      .......+...- .-....|.++...+++ ++|..|+.++-|.++|..+++... +.     .....|.++...++|++.
T Consensus       389 ~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~~lWigt~~~Gl~~~d~~~~~~~~-~~~~~~~l~~~~v~~i~~d~~g~lw  466 (795)
T 4a2l_A          389 FTSYTLQEDESARGIGSNNIKAVYVDEKK-SLVYIGTHAGGLSILHRNSGQVEN-FNQRNSQLVNENVYAILPDGEGNLW  466 (795)
T ss_dssp             EEEECCC------CCSCSCEEEEEEETTT-TEEEEEETTTEEEEEETTTCCEEE-ECTTTSCCSCSCEEEEEECSSSCEE
T ss_pred             EEEEecCCCCcccCCCCccEEEEEEcCCC-CEEEEEeCcCceeEEeCCCCcEEE-eecCCCCcCCCeeEEEEECCCCCEE
Confidence            422111100000 0124578999888877 347778887789999988776433 32     124579999988888755


Q ss_pred             EEEeCCCeEEEEeCCCCceeeeeee-----cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe----
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEAVC-----HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE----  344 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~----  344 (490)
                      +. +. +.+.+||..+++.......     .....+.++...++|.+.+...     +.+..||..+...  ....    
T Consensus       467 ig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-----~Gl~~~~~~~~~~--~~~~~~~~  537 (795)
T 4a2l_A          467 LG-TL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-----EGLSVFKQEGLDI--QKASILPV  537 (795)
T ss_dssp             EE-ES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-----SCEEEEEEETTEE--EECCCSCS
T ss_pred             EE-ec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-----CceEEEeCCCCeE--EEecCCCC
Confidence            54 44 4588999887654322111     1123478888888888766542     3477777765432  1110    


Q ss_pred             -ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee--CCCceeeEEEeeCceeEEeecceeEEEEe
Q psy17682        345 -LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ--TPDPQRGIGMMPKRGCDVNSCEIGRFFRL  421 (490)
Q Consensus       345 -~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~~~~~~~~  421 (490)
                       .-....|.++..+++|+.. ++. .. -+..||..+++ +. ......  ....|.++...++|.+.+++..-+..|+.
T Consensus       538 ~~l~~~~i~~i~~d~~g~lW-igT-~~-Gl~~~d~~~~~-~~-~~~~~~gl~~~~i~~i~~d~~g~lWi~t~~Gl~~~~~  612 (795)
T 4a2l_A          538 SNVTKLFTNCIYEASNGIIW-VGT-RE-GFYCFNEKDKQ-IK-RYNTTNGLPNNVVYGILEDSFGRLWLSTNRGISCFNP  612 (795)
T ss_dssp             CGGGGSCEEEEEECTTSCEE-EEE-SS-CEEEEETTTTE-EE-EECGGGTCSCSCEEEEEECTTSCEEEEETTEEEEEET
T ss_pred             CCCCCCeeEEEEECCCCCEE-EEe-CC-CceeECCCCCc-EE-EeCCCCCCchhheEEEEECCCCCEEEEcCCceEEEcC
Confidence             0112358888889999876 333 33 57888876653 22 221111  12458888888888877776655555554


Q ss_pred             cC
Q psy17682        422 NN  423 (490)
Q Consensus       422 ~~  423 (490)
                      .+
T Consensus       613 ~~  614 (795)
T 4a2l_A          613 ET  614 (795)
T ss_dssp             TT
T ss_pred             CC
Confidence            43

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.85  E-value=9.7e-07  Score=78.08  Aligned_cols=193  Identities=11%  Similarity=-0.051  Sum_probs=125.0

Q ss_pred             CEEEEEEeeCCCCEEEEEeC--CCcEEEEECCCCeeEEEEecCC-CcEEEEEEcCCCCEEE-EEeCCCeEEEEeCCCCce
Q psy17682        217 RVGLVLWHPTAQNVLLTAGS--DNNVAIWNVGTGEIMIQIECHP-DIVYSASWNWDGSKLL-TTCKDKKMRIINPRTGAI  292 (490)
Q Consensus       217 ~v~~~~~~p~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~  292 (490)
                      ....+.|++++ .++++.+.  ++.|+++|+.+++.+..+.-.. .....+++.  +..|. +.-.++.+.++|..+.+.
T Consensus        22 f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v   98 (266)
T 2iwa_A           22 FTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN   98 (266)
T ss_dssp             CEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred             CcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence            36899999986 35555543  5799999999999988876222 223355555  44444 444688999999999999


Q ss_pred             eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC---CceeeeeecCCCCeEEEEecC
Q psy17682        293 EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS---NGVMFPLYDPDTNLVYLCGKG  369 (490)
Q Consensus       293 ~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~---~~i~~~~~s~~~~~l~~~g~~  369 (490)
                      +.++.....   ....+++||..+.++.   ..+.|.++|..+.+....+..-...   ...+.+.|. +| .+|+....
T Consensus        99 ~~~i~~g~~---~g~glt~Dg~~l~vs~---gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~lyvn~~~  170 (266)
T 2iwa_A           99 IKNFTHQMK---DGWGLATDGKILYGSD---GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVWANIWQ  170 (266)
T ss_dssp             EEEEECCSS---SCCEEEECSSSEEEEC---SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETT
T ss_pred             EEEEECCCC---CeEEEEECCCEEEEEC---CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEEEecCC
Confidence            888863311   1233556777666554   3679999999886643333321111   135677777 66 66677777


Q ss_pred             CCeEEEEEecCCCCeeEEeeeee-----------CCCceeeEEEeeCce-eEEeecceeEEEEe
Q psy17682        370 DSVIRYFEITAEPPFVHYINTFQ-----------TPDPQRGIGMMPKRG-CDVNSCEIGRFFRL  421 (490)
Q Consensus       370 dg~i~iwd~~~~~~~~~~~~~~~-----------~~~~i~~~~~sp~~~-~l~~~~~~~~~~~~  421 (490)
                      ++.|.+-|..+++. ...+..-.           .....++++|+|++. +++++....+++.+
T Consensus       171 ~~~V~vID~~tg~V-~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i  233 (266)
T 2iwa_A          171 TDCIARISAKDGTL-LGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEI  233 (266)
T ss_dssp             SSEEEEEETTTCCE-EEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred             CCeEEEEECCCCcE-EEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEE
Confidence            88999999999983 22332110           012458999999975 45555444444443

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.81  E-value=7.6e-07  Score=91.24  Aligned_cols=238  Identities=10%  Similarity=-0.001  Sum_probs=148.2

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe------CCCcEEEEECCCCeeEE
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG------SDNNVAIWNVGTGEIMI  252 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~------~dg~v~iwd~~~~~~~~  252 (490)
                      ..++.++.|+.|..+|.++|+.+..+.....  ......+.+.-.-.++  .++.++      .++.|..||.++|+.+.
T Consensus       122 g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~--~~~~~~~~~sP~v~~g--~v~vg~~~~~~~~~g~v~a~D~~tG~~~W  197 (689)
T 1yiq_A          122 GKVYVGVLDGRLEAIDAKTGQRAWSVDTRAD--HKRSYTITGAPRVVNG--KVVIGNGGAEFGVRGYVTAYDAETGKEAW  197 (689)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEECCSC--TTSCCBCCSCCEEETT--EEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred             CEEEEEccCCEEEEEECCCCCEeeeecCcCC--CCCCccccCCcEEECC--EEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence            5788888999999999999988765432100  0000011100001133  444443      36899999999999988


Q ss_pred             EEecCC-------------------------------CcEEEEEEcCCCCEEEEEeCCCe-------------------E
Q psy17682        253 QIECHP-------------------------------DIVYSASWNWDGSKLLTTCKDKK-------------------M  282 (490)
Q Consensus       253 ~~~~~~-------------------------------~~v~~~~~~~~~~~l~~~~~dg~-------------------i  282 (490)
                      .+....                               .....++++|+...++.++.++.                   |
T Consensus       198 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v  277 (689)
T 1yiq_A          198 RFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSI  277 (689)
T ss_dssp             EEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEE
T ss_pred             EecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence            875210                               01125788898889999887764                   9


Q ss_pred             EEEeCCCCceeeeeeecCC--------CceeEEEEeCCCc---EEEEEeCCCceeEEEEecCCCCCCCeEEEecc-----
Q psy17682        283 RIINPRTGAIEEEAVCHEG--------SKATRAIYLKSGL---IFTTGFSKMSERQYSLRAPDHLDEPIVMVELD-----  346 (490)
Q Consensus       283 ~iwd~~~~~~~~~~~~~~~--------~~~~~~~~s~~~~---~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~-----  346 (490)
                      ..+|..+++.+..+.....        ..........+|+   .++.++   .++.++++|.++++.........     
T Consensus       278 ~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~---~~G~l~~lD~~tG~~l~~~~~~~~~w~~  354 (689)
T 1yiq_A          278 VAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAP---KNGFFYVIDRATGELLSAKGIVPQSWTK  354 (689)
T ss_dssp             EEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECC---TTSEEEEEETTTCCEEEEEESSCCSSEE
T ss_pred             EEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEEC---CCCeEEEEECCCCCEecccccccccccc
Confidence            9999999999887763211        1122222333565   677776   68999999999876432111100     


Q ss_pred             ---------------------C-----------CCceeeeeecCCCCeEEEEec--------------------------
Q psy17682        347 ---------------------T-----------SNGVMFPLYDPDTNLVYLCGK--------------------------  368 (490)
Q Consensus       347 ---------------------~-----------~~~i~~~~~s~~~~~l~~~g~--------------------------  368 (490)
                                           .           ...-..++|+|+...+|+...                          
T Consensus       355 ~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  434 (689)
T 1yiq_A          355 GMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGL  434 (689)
T ss_dssp             EEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSS
T ss_pred             ccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCc
Confidence                                 0           000123788999888865321                          


Q ss_pred             ------------------CCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCCce
Q psy17682        369 ------------------GDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSGLC  427 (490)
Q Consensus       369 ------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~~~  427 (490)
                                        .+|.|+.||+.+++    .+..+..+.+..+-.++..+.+++.+  ++.++.|+..+++.+
T Consensus       435 ~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~----~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~l  509 (689)
T 1yiq_A          435 RTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQ----AAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKL  509 (689)
T ss_dssp             EECCCCSSHHHHHHHHTTCEEEEEEEETTTTE----EEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             cccccCcccccCCCCCCCcceeEEEEECCCCC----eEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccc
Confidence                              14789999999997    33334444455555677666665555  457888888888744

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=98.78  E-value=1.6e-09  Score=102.57  Aligned_cols=143  Identities=11%  Similarity=0.089  Sum_probs=79.3

Q ss_pred             CEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCce-eEE
Q psy17682        229 NVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKA-TRA  307 (490)
Q Consensus       229 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~  307 (490)
                      ..+++++.|+.|+.||..+|+.+.++..  +.+.+..+..++..+++++.||.|+.||..+++.+..+..+....+ ...
T Consensus        10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp   87 (369)
T 2hz6_A           10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASP   87 (369)
T ss_dssp             TEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCS
T ss_pred             CEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCc
Confidence            3789999999999999999999988875  4555555566777888888999999999999887665542211001 001


Q ss_pred             EEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682        308 IYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF  384 (490)
Q Consensus       308 ~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~  384 (490)
                      .+.. +..+++++   .++.++.||..+++.......   ..   ...++|++..+ ++++.|+.|+.||..+++..
T Consensus        88 ~~~~-~~~v~~g~---~dg~v~a~D~~tG~~~w~~~~---~~---~~~~~p~~~~v-~~~~~dg~v~a~d~~tG~~~  153 (369)
T 2hz6_A           88 CRSS-DGILYMGK---KQDIWYVIDLLTGEKQQTLSS---AF---ADSLSPSTSLL-YLGRTEYTITMYDTKTRELR  153 (369)
T ss_dssp             CC------CCCCE---EEEEEEEECCC----------------------------E-EEEEEEEEEECCCSSSSSCC
T ss_pred             eEec-CCEEEEEe---CCCEEEEEECCCCcEEEEecC---CC---cccccccCCEE-EEEecCCEEEEEECCCCCEE
Confidence            1112 33455555   589999999998775433221   11   23456777777 56778999999999998743

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.76  E-value=1.8e-06  Score=75.47  Aligned_cols=195  Identities=10%  Similarity=0.029  Sum_probs=125.2

Q ss_pred             cccC--EEEEEEeeCCCCEEEEEeCCC--cEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe-CCCeEEEEeCC
Q psy17682        214 HQRR--VGLVLWHPTAQNVLLTAGSDN--NVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KDKKMRIINPR  288 (490)
Q Consensus       214 ~~~~--v~~~~~~p~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~  288 (490)
                      |...  ...+.|+ ++ .++.+.+.+|  .|+++|+.+++.+.++... .........+++..|.... .++.+.+||..
T Consensus        39 hd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~  115 (262)
T 3nol_A           39 HDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIR  115 (262)
T ss_dssp             CCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred             CCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECc
Confidence            5443  4788998 55 4777777766  8999999999998888743 3333322333355555444 68999999999


Q ss_pred             CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC---CceeeeeecCCCCeEEE
Q psy17682        289 TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS---NGVMFPLYDPDTNLVYL  365 (490)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~---~~i~~~~~s~~~~~l~~  365 (490)
                      +.+.+.++.....  -  ..+.+++..|..+.   ..+.|.++|..+.+....+......   ..++.+.|. +| .|++
T Consensus       116 t~~~~~ti~~~~e--G--~glt~dg~~L~~Sd---Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G-~lya  186 (262)
T 3nol_A          116 NLRQVRSFNYDGE--G--WGLTHNDQYLIMSD---GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG-EIFA  186 (262)
T ss_dssp             TCCEEEEEECSSC--C--CCEEECSSCEEECC---SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT-EEEE
T ss_pred             cCcEEEEEECCCC--c--eEEecCCCEEEEEC---CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC-EEEE
Confidence            9999998874322  1  23335666666554   3678999999986643333221111   234456776 66 5667


Q ss_pred             EecCCCeEEEEEecCCCCeeEEeee--e--------eCCCceeeEEEeeCc-eeEEeecceeEEEEe
Q psy17682        366 CGKGDSVIRYFEITAEPPFVHYINT--F--------QTPDPQRGIGMMPKR-GCDVNSCEIGRFFRL  421 (490)
Q Consensus       366 ~g~~dg~i~iwd~~~~~~~~~~~~~--~--------~~~~~i~~~~~sp~~-~~l~~~~~~~~~~~~  421 (490)
                      ..-.+..|.+.|..+++ ....+..  +        ....-.+++||+|++ .+++++-.--++|.+
T Consensus       187 n~w~~~~I~vIDp~tG~-V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev  252 (262)
T 3nol_A          187 NVWQTNKIVRIDPETGK-VTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEI  252 (262)
T ss_dssp             EETTSSEEEEECTTTCB-EEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred             EEccCCeEEEEECCCCc-EEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEE
Confidence            77678899999999987 2222221  1        011345899999976 455555555566654

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.76  E-value=1.3e-05  Score=74.04  Aligned_cols=240  Identities=10%  Similarity=-0.021  Sum_probs=139.8

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccccccee-------------eecccccCEEEEEEee-CCCCEE
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVV-------------DLLYHQRRVGLVLWHP-TAQNVL  231 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-------------~~~~~~~~v~~~~~~p-~~~~~l  231 (490)
                      ....+++|.+++ ++++++..++.|..|+..+++. ..+..+..             ........+.++++.+ ++  .|
T Consensus        19 ~~p~~i~~d~~g-~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g--~l   94 (322)
T 2fp8_A           19 YAPNSFTFDSTN-KGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN--QL   94 (322)
T ss_dssp             SCCCCEECCTTC-SSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT--EE
T ss_pred             CCceEEEEcCCC-CEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCC--cE
Confidence            456788999987 7677888889999998765443 21110000             0000123578999997 55  35


Q ss_pred             EEEeCCCcEEEEECCCCeeEEEEec-----CCCcEEEEEEcC-CCCEEEEEeC-----------------CCeEEEEeCC
Q psy17682        232 LTAGSDNNVAIWNVGTGEIMIQIEC-----HPDIVYSASWNW-DGSKLLTTCK-----------------DKKMRIINPR  288 (490)
Q Consensus       232 ~s~~~dg~v~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i~iwd~~  288 (490)
                      +.+...+.|..+|..+++. ..+..     .......+++.+ +|+++++...                 ++.|..||..
T Consensus        95 ~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~  173 (322)
T 2fp8_A           95 YIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS  173 (322)
T ss_dssp             EEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred             EEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence            5555555688888775542 22211     123478899999 9987776432                 3679999987


Q ss_pred             CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC--CeEEEeccCCCceeeeeecCCCCeEEEE
Q psy17682        289 TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE--PIVMVELDTSNGVMFPLYDPDTNLVYLC  366 (490)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~  366 (490)
                      +++.........  ....++++++|+.|..+..  ..+.|..+++.....  ...+..  ... ...++++++|++. ++
T Consensus       174 ~~~~~~~~~~~~--~p~gia~~~dg~~lyv~d~--~~~~I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~~G~l~-va  245 (322)
T 2fp8_A          174 TKETTLLLKELH--VPGGAEVSADSSFVLVAEF--LSHQIVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNADGHFW-VS  245 (322)
T ss_dssp             TTEEEEEEEEES--CCCEEEECTTSSEEEEEEG--GGTEEEEEESSSTTTTCEEEEEE--CSS-EEEEEECTTSCEE-EE
T ss_pred             CCEEEEeccCCc--cCcceEECCCCCEEEEEeC--CCCeEEEEECCCCcCCccceEEe--CCC-CCCeEECCCCCEE-EE
Confidence            765433222212  2677999999986555431  457899998875321  111222  122 6778999999865 44


Q ss_pred             ecC----------CCeEEEEEecCCCCeeEEeeeeeC--CCceeeEEEeeCceeEEeecc--eeEEEEe
Q psy17682        367 GKG----------DSVIRYFEITAEPPFVHYINTFQT--PDPQRGIGMMPKRGCDVNSCE--IGRFFRL  421 (490)
Q Consensus       367 g~~----------dg~i~iwd~~~~~~~~~~~~~~~~--~~~i~~~~~sp~~~~l~~~~~--~~~~~~~  421 (490)
                      ...          .+.|..+|.. ++ ....+.....  -..+.++++ .++.+.+++..  .+..+++
T Consensus       246 ~~~~~~~~~~~~~~~~v~~~d~~-G~-~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~  311 (322)
T 2fp8_A          246 SSEELDGNMHGRVDPKGIKFDEF-GN-ILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVY  311 (322)
T ss_dssp             EEEETTSSTTSCEEEEEEEECTT-SC-EEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC
T ss_pred             ecCcccccccCCCccEEEEECCC-CC-EEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEec
Confidence            433          4567777753 43 2222221111  124566666 46666666433  3344443

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.75  E-value=2.5e-06  Score=78.99  Aligned_cols=217  Identities=13%  Similarity=0.051  Sum_probs=136.7

Q ss_pred             EEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccce
Q psy17682        129 EIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPV  208 (490)
Q Consensus       129 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  208 (490)
                      .+..+..++.+..++..      ++   .......+...+.++...+++ . +..++.++.|..+|.. ++....+..  
T Consensus       109 ~l~v~t~~~~l~~~d~~------g~---~~~~~~~~~~~~~~~~~~~~g-~-l~vgt~~~~l~~~d~~-g~~~~~~~~--  174 (330)
T 3hxj_A          109 ILYVTSMDGHLYAINTD------GT---EKWRFKTKKAIYATPIVSEDG-T-IYVGSNDNYLYAINPD-GTEKWRFKT--  174 (330)
T ss_dssp             EEEEECTTSEEEEECTT------SC---EEEEEECSSCCCSCCEECTTS-C-EEEECTTSEEEEECTT-SCEEEEEEC--
T ss_pred             EEEEEecCCEEEEEcCC------CC---EEEEEcCCCceeeeeEEcCCC-E-EEEEcCCCEEEEECCC-CCEeEEEec--
Confidence            45566777888888763      22   111223344456677777766 3 6667788999999987 665443321  


Q ss_pred             eeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy17682        209 VDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPR  288 (490)
Q Consensus       209 ~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~  288 (490)
                           ....+.++...+++.  +..++  +.|..+| .+++.+..+......+.++...++|. |..++.++.+..+|. 
T Consensus       175 -----~~~~~~~~~~d~~g~--l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-  242 (330)
T 3hxj_A          175 -----NDAITSAASIGKDGT--IYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-  242 (330)
T ss_dssp             -----SSCCCSCCEECTTCC--EEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-
T ss_pred             -----CCCceeeeEEcCCCE--EEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-
Confidence                 334566677767764  44555  7899999 77777777765556688888887775 555677788998984 


Q ss_pred             CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEec
Q psy17682        289 TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK  368 (490)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~  368 (490)
                      +++....+..... ....+...+++.+.+..    .++.+..+|. +++. ...... ....+.++..+++|+..  .|+
T Consensus       243 ~g~~~~~~~~~~~-~~~~~~~~~~g~l~v~t----~~ggl~~~d~-~g~~-~~~~~~-~~~~~~~~~~d~~g~l~--~gt  312 (330)
T 3hxj_A          243 DGTEKWRFKTGKR-IESSPVIGNTDTIYFGS----YDGHLYAINP-DGTE-KWNFET-GSWIIATPVIDENGTIY--FGT  312 (330)
T ss_dssp             TSCEEEEEECSSC-CCSCCEECTTSCEEEEC----TTCEEEEECT-TSCE-EEEEEC-SSCCCSCCEECTTCCEE--EEC
T ss_pred             CCCEeEEeeCCCC-ccccceEcCCCeEEEec----CCCCEEEECC-CCcE-EEEEEc-CCccccceEEcCCCEEE--EEc
Confidence            5666655553332 24455666677666544    4667888885 3332 222221 23446677777888765  477


Q ss_pred             CCCeEEEEEecCC
Q psy17682        369 GDSVIRYFEITAE  381 (490)
Q Consensus       369 ~dg~i~iwd~~~~  381 (490)
                      .+|.+++......
T Consensus       313 ~~G~~~~~~~~~~  325 (330)
T 3hxj_A          313 RNGKFYALFNLEH  325 (330)
T ss_dssp             TTSCEEEEEC---
T ss_pred             CCCeEEEEecccc
Confidence            8999988776654

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.74  E-value=2.4e-05  Score=79.93  Aligned_cols=213  Identities=9%  Similarity=0.077  Sum_probs=130.2

Q ss_pred             CCcEEEEECCCCCcccccccc----eeee--------------------cccccCEEEEEEeeCCCCEEEEEeCCC----
Q psy17682        187 DCVVKVWQIPDGGISRTLTEP----VVDL--------------------LYHQRRVGLVLWHPTAQNVLLTAGSDN----  238 (490)
Q Consensus       187 dg~i~iwd~~~~~~~~~~~~~----~~~~--------------------~~~~~~v~~~~~~p~~~~~l~s~~~dg----  238 (490)
                      +|.|..+|.++|+.+..+...    ....                    .++......+++.|+.. +++.+..++    
T Consensus       177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~-~vy~~~~~g~~w~  255 (668)
T 1kv9_A          177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELD-LLYVGTGNGSPWN  255 (668)
T ss_dssp             BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSC
T ss_pred             CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCC-EEEEeCCCCCccc
Confidence            589999999999987765321    0000                    01111123567888774 777777665    


Q ss_pred             ---------------cEEEEECCCCeeEEEEec--CC-------CcEEEEEEcCCCC---EEEEEeCCCeEEEEeCCCCc
Q psy17682        239 ---------------NVAIWNVGTGEIMIQIEC--HP-------DIVYSASWNWDGS---KLLTTCKDKKMRIINPRTGA  291 (490)
Q Consensus       239 ---------------~v~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~  291 (490)
                                     .|..+|.++|+.+..++.  |.       .+.....+..+|+   .++.++.+|.++++|..+++
T Consensus       256 ~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~  335 (668)
T 1kv9_A          256 REVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK  335 (668)
T ss_dssp             HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred             cCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence                           399999999999988873  22       2233333334665   68889999999999999999


Q ss_pred             eeeeeeecC-----------CC------------------------ceeEEEEeCCCcEEEEEeC---------------
Q psy17682        292 IEEEAVCHE-----------GS------------------------KATRAIYLKSGLIFTTGFS---------------  321 (490)
Q Consensus       292 ~~~~~~~~~-----------~~------------------------~~~~~~~s~~~~~l~~~~~---------------  321 (490)
                      .+.......           +.                        ....++++|+..++.+...               
T Consensus       336 ~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~  415 (668)
T 1kv9_A          336 LISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVT  415 (668)
T ss_dssp             EEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCC
T ss_pred             EeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeecccccc
Confidence            874432111           00                        0112678887655543210               


Q ss_pred             ------------------CCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682        322 ------------------KMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP  383 (490)
Q Consensus       322 ------------------~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~  383 (490)
                                        ...++.|..||+.+++.......   ........+...+..+ +.|+.|+.++.||..+++.
T Consensus       416 ~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~---~~~~~~~~~~t~gg~v-f~g~~dg~l~a~d~~tG~~  491 (668)
T 1kv9_A          416 RKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPY---PTHWNGGTLSTAGNLV-FQGTAAGQMHAYSADKGEA  491 (668)
T ss_dssp             CSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEE---SSSCCCCEEEETTTEE-EEECTTSEEEEEETTTCCE
T ss_pred             ccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccC---CCCCcCceeEeCCCEE-EEECCcccchhhhhhcChh
Confidence                              01248899999998764333322   2233333444567777 5678999999999999983


Q ss_pred             eeEEeeeeeCCCce--eeEEEeeCcee
Q psy17682        384 FVHYINTFQTPDPQ--RGIGMMPKRGC  408 (490)
Q Consensus       384 ~~~~~~~~~~~~~i--~~~~~sp~~~~  408 (490)
                      +    ..+..+..+  .-+.+..+|+.
T Consensus       492 l----~~~~~~~~~~~~p~~~~~~G~~  514 (668)
T 1kv9_A          492 L----WQFEAQSGIVAAPMTFELAGRQ  514 (668)
T ss_dssp             E----EEEECSSCCCSCCEEEEETTEE
T ss_pred             h----eEecCCCCcccCceEEEECCEE
Confidence            3    333322222  33455567653

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.74  E-value=6.7e-05  Score=68.98  Aligned_cols=207  Identities=7%  Similarity=-0.172  Sum_probs=128.9

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC---CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEE
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG---GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVA  241 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~  241 (490)
                      -..+.+++|++.++.++++-...+.|..+++...   .....+      +...-.....+++.+.+.+++++-...+.|.
T Consensus        29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~------~~~~~~~p~glavd~~~~~ly~~d~~~~~I~  102 (316)
T 1ijq_A           29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV------ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVS  102 (316)
T ss_dssp             CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE------ECSSCSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred             CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEE------EeCCCCCcCEEEEeecCCeEEEEECCCCEEE
Confidence            4567899999876466666667789999998652   111111      1112234578899876655666666778999


Q ss_pred             EEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC-C-CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682        242 IWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK-D-KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG  319 (490)
Q Consensus       242 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~  319 (490)
                      +.++........+.........++++|.+..|+.+.. . +.|..+++... ....+....-.....+++++++..|..+
T Consensus       103 ~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~~~~P~gla~d~~~~~lY~~  181 (316)
T 1ijq_A          103 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWV  181 (316)
T ss_dssp             EEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred             EEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECCCCCceEEEEeccCCEEEEE
Confidence            9998754433333334456889999996665555543 3 68888887643 3333322222347899999876555544


Q ss_pred             eCCCceeEEEEecCCCCCCCeEEEec-cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682        320 FSKMSERQYSLRAPDHLDEPIVMVEL-DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP  383 (490)
Q Consensus       320 ~~~~~~~~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~  383 (490)
                      ..  ..+.|..+|++... ...+... ........+++.  +..||++-...+.|..++..+++.
T Consensus       182 D~--~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~g~~  241 (316)
T 1ijq_A          182 DS--KLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSD  241 (316)
T ss_dssp             ET--TTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCC
T ss_pred             EC--CCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCCCCcc
Confidence            32  46789999987533 2333222 122335566664  456667777888999999877763

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.70  E-value=1.9e-05  Score=78.87  Aligned_cols=222  Identities=11%  Similarity=0.067  Sum_probs=130.4

Q ss_pred             EEEEEeC------CCcEEEEECCCCCcccccccceeeec-----------------------------cc-ccCE-EEEE
Q psy17682        180 VIASGSE------DCVVKVWQIPDGGISRTLTEPVVDLL-----------------------------YH-QRRV-GLVL  222 (490)
Q Consensus       180 ~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~-----------------------------~~-~~~v-~~~~  222 (490)
                      .++.++.      ++.|..+|.++++.+..+........                             .+ ...+ ..++
T Consensus       162 ~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a  241 (571)
T 2ad6_A          162 TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYA  241 (571)
T ss_dssp             EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCE
T ss_pred             EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEE
Confidence            4555544      78999999999988765432110000                             00 0001 2355


Q ss_pred             EeeCCCCEEEEEeCC----------------CcEEEEECCCCeeEEEEecC--C--------CcEEEEEEcCCCC---EE
Q psy17682        223 WHPTAQNVLLTAGSD----------------NNVAIWNVGTGEIMIQIECH--P--------DIVYSASWNWDGS---KL  273 (490)
Q Consensus       223 ~~p~~~~~l~s~~~d----------------g~v~iwd~~~~~~~~~~~~~--~--------~~v~~~~~~~~~~---~l  273 (490)
                      +.+... +++.+..+                +.|..+|.++++.+..++..  .        .++. +....+|+   .+
T Consensus       242 ~d~~~g-~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v  319 (571)
T 2ad6_A          242 YDPKLN-LFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLL  319 (571)
T ss_dssp             EETTTT-EEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEE
T ss_pred             EcCCCC-eEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEE
Confidence            666654 55555432                35999999999998887632  1        1221 22234674   57


Q ss_pred             EEEeCCCeEEEEeCCCCceeeeeeecC------------CCce--------------------------eEEEEeCCCcE
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEAVCHE------------GSKA--------------------------TRAIYLKSGLI  315 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~------------~~~~--------------------------~~~~~s~~~~~  315 (490)
                      +.++.+|.++++|..+++.+.......            +.++                          ..++++|+..+
T Consensus       320 ~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~  399 (571)
T 2ad6_A          320 SHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRT  399 (571)
T ss_dssp             EEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTE
T ss_pred             EEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCE
Confidence            788899999999999999877654221            0101                          24578888666


Q ss_pred             EEEEeCC----------------------------------CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCC
Q psy17682        316 FTTGFSK----------------------------------MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTN  361 (490)
Q Consensus       316 l~~~~~~----------------------------------~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  361 (490)
                      +.+...+                                  ...+.|..||..+++.......   ...+....+...+.
T Consensus       400 ~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~---~~~~~~~~~~t~gg  476 (571)
T 2ad6_A          400 LYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE---KFAAWGGTLYTKGG  476 (571)
T ss_dssp             EEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEE---SSCCCSBCEEETTT
T ss_pred             EEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecC---CCCccceeEEECCC
Confidence            6554321                                  1357899999988764333322   22233333333456


Q ss_pred             eEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCce--eeEEEeeCceeEEe
Q psy17682        362 LVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQ--RGIGMMPKRGCDVN  411 (490)
Q Consensus       362 ~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i--~~~~~sp~~~~l~~  411 (490)
                      .+| .++.|+.|+.+|.++++.    +..+.....+  .-+.+..+|+..+.
T Consensus       477 ~v~-~g~~dg~l~a~D~~tG~~----lw~~~~~~~~~~~p~~~~~~G~~yv~  523 (571)
T 2ad6_A          477 LVW-YATLDGYLKALDNKDGKE----LWNFKMPSGGIGSPMTYSFKGKQYIG  523 (571)
T ss_dssp             EEE-EECTTSEEEEEETTTCCE----EEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred             EEE-EEcCCCeEEEEECCCCCE----EEEEeCCCCcEeeeEEEEECCEEEEE
Confidence            664 478999999999999983    3333332222  22445577765443

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.69  E-value=2.3e-06  Score=74.77  Aligned_cols=189  Identities=8%  Similarity=-0.033  Sum_probs=124.3

Q ss_pred             EEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcE--EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeee
Q psy17682        218 VGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIV--YSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEE  295 (490)
Q Consensus       218 v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  295 (490)
                      ...+.|+. + .++.+.+.+|.|+++|+.+++.+..+ -. ...  ..+++.. ++..+..-.++.+.+||..+.+.+.+
T Consensus        57 tqGL~~~~-~-~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~t  131 (268)
T 3nok_A           57 TQGLVFHQ-G-HFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERT  131 (268)
T ss_dssp             EEEEEEET-T-EEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred             cceEEEEC-C-EEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEE
Confidence            47888873 3 58888888999999999999988777 22 233  3355542 34444555789999999999999998


Q ss_pred             eeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCC---ceeeeeecCCCCeEEEEecCCCe
Q psy17682        296 AVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSN---GVMFPLYDPDTNLVYLCGKGDSV  372 (490)
Q Consensus       296 ~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~---~i~~~~~s~~~~~l~~~g~~dg~  372 (490)
                      +.....  -..++  +++..|..+.   ..+.|.++|..+.+....+.......   .++.+.|. +| .|++....+..
T Consensus       132 i~~~~e--GwGLt--~Dg~~L~vSd---Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG-~lyanvw~s~~  202 (268)
T 3nok_A          132 TRYSGE--GWGLC--YWNGKLVRSD---GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NG-VIYANIWHSSD  202 (268)
T ss_dssp             EECSSC--CCCEE--EETTEEEEEC---SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTCSE
T ss_pred             EeCCCc--eeEEe--cCCCEEEEEC---CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CC-EEEEEECCCCe
Confidence            874322  22333  5677666664   37799999999876433332212211   24556666 66 56677767889


Q ss_pred             EEEEEecCCCCeeEEeeee-----------eCCCceeeEEEeeCc-eeEEeecceeEEEEe
Q psy17682        373 IRYFEITAEPPFVHYINTF-----------QTPDPQRGIGMMPKR-GCDVNSCEIGRFFRL  421 (490)
Q Consensus       373 i~iwd~~~~~~~~~~~~~~-----------~~~~~i~~~~~sp~~-~~l~~~~~~~~~~~~  421 (490)
                      |.+.|..+++ ....+..-           ....-.++||++|++ ++++++-.--++|.+
T Consensus       203 I~vIDp~TG~-V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev  262 (268)
T 3nok_A          203 VLEIDPATGT-VVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEV  262 (268)
T ss_dssp             EEEECTTTCB-EEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEE
T ss_pred             EEEEeCCCCc-EEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEE
Confidence            9999999987 22222211           112356999999975 556666555566654

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.68  E-value=2e-05  Score=72.14  Aligned_cols=223  Identities=10%  Similarity=-0.031  Sum_probs=132.3

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC-C-cEEEE
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-N-NVAIW  243 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-g-~v~iw  243 (490)
                      ....+++|++++ +++++-..++.|..||... +....+.        ....+.++++.+++. ++++.... + .|..+
T Consensus        32 ~~pegia~~~~g-~lyv~d~~~~~I~~~d~~g-~~~~~~~--------~~~~p~gia~~~dG~-l~vad~~~~~~~v~~~  100 (306)
T 2p4o_A           32 TFLENLASAPDG-TIFVTNHEVGEIVSITPDG-NQQIHAT--------VEGKVSGLAFTSNGD-LVATGWNADSIPVVSL  100 (306)
T ss_dssp             CCEEEEEECTTS-CEEEEETTTTEEEEECTTC-CEEEEEE--------CSSEEEEEEECTTSC-EEEEEECTTSCEEEEE
T ss_pred             CCcceEEECCCC-CEEEEeCCCCeEEEECCCC-ceEEEEe--------CCCCceeEEEcCCCc-EEEEeccCCcceEEEE
Confidence            467789999987 6777766789999998654 3222111        234688999999985 65555432 2 46677


Q ss_pred             ECCCCeeEEEEe-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-eeeeee--------cCCCceeEEEEeCCC
Q psy17682        244 NVGTGEIMIQIE-CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAI-EEEAVC--------HEGSKATRAIYLKSG  313 (490)
Q Consensus       244 d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~--------~~~~~~~~~~~s~~~  313 (490)
                      |..+++...... ........++..+++..+++-..++.|+.+|..+++. +.....        ..-.....+  ++++
T Consensus       101 d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg  178 (306)
T 2p4o_A          101 VKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFG  178 (306)
T ss_dssp             ECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEET
T ss_pred             cCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCC
Confidence            877776543322 1223345566555555555554688999999876431 111000        011123444  7887


Q ss_pred             cEEEEEeCCCceeEEEEecCCC-CC--CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee
Q psy17682        314 LIFTTGFSKMSERQYSLRAPDH-LD--EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT  390 (490)
Q Consensus       314 ~~l~~~~~~~~~~~i~iwd~~~-~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~  390 (490)
                      ..|..+..  ..+.|..+++.. +.  .......   ......++++++|+++ ++....+.|.+++.. ++ +. .+..
T Consensus       179 ~~lyv~d~--~~~~I~~~~~~~~g~~~~~~~~~~---~~~P~gi~vd~dG~l~-va~~~~~~V~~~~~~-G~-~~-~~~~  249 (306)
T 2p4o_A          179 NFLYVSNT--EKMLLLRIPVDSTDKPGEPEIFVE---QTNIDDFAFDVEGNLY-GATHIYNSVVRIAPD-RS-TT-IIAQ  249 (306)
T ss_dssp             TEEEEEET--TTTEEEEEEBCTTSCBCCCEEEEE---SCCCSSEEEBTTCCEE-EECBTTCCEEEECTT-CC-EE-EEEC
T ss_pred             CEEEEEeC--CCCEEEEEEeCCCCCCCccEEEec---cCCCCCeEECCCCCEE-EEeCCCCeEEEECCC-CC-EE-EEee
Confidence            65555442  467899999874 21  1111211   1345678899999764 666667889999865 44 21 1222


Q ss_pred             eeCC-CceeeEEEe---eCceeEE
Q psy17682        391 FQTP-DPQRGIGMM---PKRGCDV  410 (490)
Q Consensus       391 ~~~~-~~i~~~~~s---p~~~~l~  410 (490)
                      ...+ ...++++|.   |++..|.
T Consensus       250 ~~~~~~~p~~~a~~g~~~d~~~Ly  273 (306)
T 2p4o_A          250 AEQGVIGSTAVAFGQTEGDCTAIY  273 (306)
T ss_dssp             GGGTCTTEEEEEECCSTTTTTEEE
T ss_pred             cccccCCceEEEEecccCCCCEEE
Confidence            2222 467899998   7854433

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.68  E-value=9.3e-06  Score=76.85  Aligned_cols=220  Identities=9%  Similarity=0.028  Sum_probs=129.0

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCC
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHP  258 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~  258 (490)
                      ..++.++.++.|..+|.++++.......+       ......... .++  .++.++.++.|..+|..+++.+..+....
T Consensus       104 ~~v~v~~~~g~l~a~d~~tG~~~W~~~~~-------~~~~~~p~~-~~~--~v~v~~~~g~l~~~d~~tG~~~W~~~~~~  173 (376)
T 3q7m_A          104 GHVYIGSEKAQVYALNTSDGTVAWQTKVA-------GEALSRPVV-SDG--LVLIHTSNGQLQALNEADGAVKWTVNLDM  173 (376)
T ss_dssp             TEEEEEETTSEEEEEETTTCCEEEEEECS-------SCCCSCCEE-ETT--EEEEECTTSEEEEEETTTCCEEEEEECCC
T ss_pred             CEEEEEcCCCEEEEEECCCCCEEEEEeCC-------CceEcCCEE-ECC--EEEEEcCCCeEEEEECCCCcEEEEEeCCC
Confidence            57888889999999999999876544321       111111111 133  67888889999999999999888776432


Q ss_pred             CcE-----EEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCC----------ceeEEEEeCCCcEEEEEeCCC
Q psy17682        259 DIV-----YSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGS----------KATRAIYLKSGLIFTTGFSKM  323 (490)
Q Consensus       259 ~~v-----~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----------~~~~~~~s~~~~~l~~~~~~~  323 (490)
                      ...     ......  +..+++++.++.+..+|..+++.+.........          ....... .++. +..++   
T Consensus       174 ~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~-v~~~~---  246 (376)
T 3q7m_A          174 PSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV-VNGV-VFALA---  246 (376)
T ss_dssp             -----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE-ETTE-EEEEC---
T ss_pred             CceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE-ECCE-EEEEe---
Confidence            111     112222  456788888999999999999988776532110          0011111 1344 44444   


Q ss_pred             ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEe
Q psy17682        324 SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMM  403 (490)
Q Consensus       324 ~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~s  403 (490)
                      .++.+..+|..+++....   .. ......+..  ++..++ .++.++.+..+|..+++...+ .... ....+......
T Consensus       247 ~~g~l~~~d~~tG~~~w~---~~-~~~~~~~~~--~~~~l~-~~~~~g~l~~~d~~tG~~~w~-~~~~-~~~~~~~~~~~  317 (376)
T 3q7m_A          247 YNGNLTALDLRSGQIMWK---RE-LGSVNDFIV--DGNRIY-LVDQNDRVMALTIDGGVTLWT-QSDL-LHRLLTSPVLY  317 (376)
T ss_dssp             TTSCEEEEETTTCCEEEE---EC-CCCEEEEEE--ETTEEE-EEETTCCEEEEETTTCCEEEE-ECTT-TTSCCCCCEEE
T ss_pred             cCcEEEEEECCCCcEEee---cc-CCCCCCceE--ECCEEE-EEcCCCeEEEEECCCCcEEEe-eccc-CCCcccCCEEE
Confidence            477899999987763222   12 122334443  355664 456788999999999873221 1101 11223333333


Q ss_pred             eCceeEEee-cceeEEEEecCCC
Q psy17682        404 PKRGCDVNS-CEIGRFFRLNNSG  425 (490)
Q Consensus       404 p~~~~l~~~-~~~~~~~~~~~~~  425 (490)
                       ++.+.+.. .+.+..++..+++
T Consensus       318 -~~~l~v~~~~g~l~~~d~~tG~  339 (376)
T 3q7m_A          318 -NGNLVVGDSEGYLHWINVEDGR  339 (376)
T ss_dssp             -TTEEEEECTTSEEEEEETTTCC
T ss_pred             -CCEEEEEeCCCeEEEEECCCCc
Confidence             34443333 4467777777776

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.65  E-value=7.1e-05  Score=65.72  Aligned_cols=208  Identities=10%  Similarity=0.081  Sum_probs=135.8

Q ss_pred             ecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy17682        211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRT  289 (490)
Q Consensus       211 ~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~  289 (490)
                      +.+-...+..++|+|++..++++...++.|...|.. ++.+..+. ........+++.+++.++++.-.++.+.++++..
T Consensus        22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~  100 (255)
T 3qqz_A           22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP  100 (255)
T ss_dssp             CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred             CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence            445556799999999876566678888999999997 88887775 2235688899998887767666778899998876


Q ss_pred             Ccee---eeee-----ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec------cCCCceeeee
Q psy17682        290 GAIE---EEAV-----CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL------DTSNGVMFPL  355 (490)
Q Consensus       290 ~~~~---~~~~-----~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~------~~~~~i~~~~  355 (490)
                      ...+   ....     ...+.-.-.++|+|.+..|.++.+.. ...|..|+-............      ........++
T Consensus       101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~-p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~  179 (255)
T 3qqz_A          101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN-PIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE  179 (255)
T ss_dssp             TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS-SEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred             CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC-CceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence            5422   2221     11122368999999986666555321 235566651111111222111      1233578899


Q ss_pred             ecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeC-------CCceeeEEEeeCceeEEeecceeEEEEecC
Q psy17682        356 YDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQT-------PDPQRGIGMMPKRGCDVNSCEIGRFFRLNN  423 (490)
Q Consensus       356 ~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~-------~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~  423 (490)
                      ++|....+++....+..+.++|....  +...+.....       ....-+|+|.++|.+.+++..+ .+|++..
T Consensus       180 ~dp~tg~lliLS~~s~~L~~~d~~g~--~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n-~~y~f~~  251 (255)
T 3qqz_A          180 FNQQKNTLLVLSHESRALQEVTLVGE--VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPN-RFYRFTP  251 (255)
T ss_dssp             EETTTTEEEEEETTTTEEEEECTTCC--EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTT-EEEEEEC
T ss_pred             EcCCCCeEEEEECCCCeEEEEcCCCC--EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCc-eEEEEEe
Confidence            99998888888888899999997643  2222222111       1245899999999877775444 7887754

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.63  E-value=1.4e-05  Score=82.81  Aligned_cols=200  Identities=15%  Similarity=0.156  Sum_probs=114.3

Q ss_pred             CeeEEEEC-CCCCCEEEEEeCCC----cEEEEECCCC-CcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC---
Q psy17682        167 PVLDIAWS-PHDDNVIASGSEDC----VVKVWQIPDG-GISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD---  237 (490)
Q Consensus       167 ~V~~~~~~-p~~~~~l~s~~~dg----~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d---  237 (490)
                      .+...+|| |||..++++...+|    +|+++|+.++ +.+..   .   +.   .....++|+|+++.++++ ..+   
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~---~---~~---~~~~~~~WspDg~~l~y~-~~d~~~  244 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD---K---VS---GTNGEIVWGPDHTSLFYV-TKDETL  244 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC---C---EE---EECSCCEECSSTTEEEEE-EECTTC
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc---c---cc---CceeeEEEecCCCEEEEE-EECCCC
Confidence            67889999 99943444444443    4999999888 53211   1   11   113468899999744444 443   


Q ss_pred             --CcEEEEECCCCee--EEEEe-cCCCcEEEEEEcCCCCEEEEEeC---CCeEEEEeCCCCc-ee--eeeeecCCCceeE
Q psy17682        238 --NNVAIWNVGTGEI--MIQIE-CHPDIVYSASWNWDGSKLLTTCK---DKKMRIINPRTGA-IE--EEAVCHEGSKATR  306 (490)
Q Consensus       238 --g~v~iwd~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~-~~--~~~~~~~~~~~~~  306 (490)
                        ..|.++++.+++.  ...+. ........+.|+|||++|+..+.   ...|+++|+.++. ..  ..+..........
T Consensus       245 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s  324 (751)
T 2xe4_A          245 RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYD  324 (751)
T ss_dssp             CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEE
T ss_pred             CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEE
Confidence              3588888877642  23333 22344678899999998887663   3468999998763 22  3332222223455


Q ss_pred             EEEeCCCcEEEEEeCC-CceeEEEEecCCCCCCCeE-EEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEe
Q psy17682        307 AIYLKSGLIFTTGFSK-MSERQYSLRAPDHLDEPIV-MVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEI  378 (490)
Q Consensus       307 ~~~s~~~~~l~~~~~~-~~~~~i~iwd~~~~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~  378 (490)
                      +.|+..+.+++....+ .....|..+++.+...... +.  .+...+..-.+++.++.|+++...++..++|-+
T Consensus       325 ~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li--~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~  396 (751)
T 2xe4_A          325 VQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLV--DHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTM  396 (751)
T ss_dssp             EEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEE--CCCSSEEEEEEEECSSEEEEEEEETTEEEEEEE
T ss_pred             EeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEE--CCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEE
Confidence            5555445454444322 2345777888764222111 22  222222222344456778788888886555543

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.63  E-value=0.00014  Score=69.23  Aligned_cols=231  Identities=6%  Similarity=-0.163  Sum_probs=141.4

Q ss_pred             CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccc
Q psy17682        136 QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQ  215 (490)
Q Consensus       136 ~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  215 (490)
                      ...|+..++...         ....+...-..+..++|++.++.++++-...+.|+.+++.......   ..........
T Consensus        91 ~~~I~~i~l~~~---------~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~---~~~~~~~~~~  158 (400)
T 3p5b_L           91 RHEVRKMTLDRS---------EYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS---SYDTVISRDI  158 (400)
T ss_dssp             TTEEEEECTTSC---------SCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------C---CCEEEECSSC
T ss_pred             cceeEEEccCCc---------ceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCC---cceEEEeCCC
Confidence            467788877511         1122333456788999998764666666667889999876532100   0011122233


Q ss_pred             cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCcee
Q psy17682        216 RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK--DKKMRIINPRTGAIE  293 (490)
Q Consensus       216 ~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~  293 (490)
                      .....+++.+.+.+++++-...+.|.+.+++.......+.........+++.|.+..|+....  .+.|...++..... 
T Consensus       159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~-  237 (400)
T 3p5b_L          159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-  237 (400)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC-
T ss_pred             CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc-
Confidence            467889999865556677667789999998765544444434556889999996665555542  36799888875433 


Q ss_pred             eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec-cCCCceeeeeecCCCCeEEEEecCCCe
Q psy17682        294 EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-DTSNGVMFPLYDPDTNLVYLCGKGDSV  372 (490)
Q Consensus       294 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~g~~dg~  372 (490)
                      ..+....-.....+++++++..|..+..  ..+.|...|++.... ..+... ........+++  ++..||.+-...+.
T Consensus       238 ~~~~~~~l~~P~glavd~~~~~lY~aD~--~~~~I~~~d~dG~~~-~~~~~~~~~l~~P~gl~v--~~~~lywtd~~~~~  312 (400)
T 3p5b_L          238 YSLVTENIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAV--FEDKVFWTDIINEA  312 (400)
T ss_dssp             EEEECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCCC-EEEEECSSTTSSEEEEEE--ETTEEEEEESSSCS
T ss_pred             EEEEECCCCceEEEEEEeCCCEEEEEEC--CCCEEEEEeCCCCcc-EEEEeCCCCCCCCEEEEE--eCCEEEEecCCCCe
Confidence            2332222234889999987665555532  467899999875433 233221 12233455655  45567777777888


Q ss_pred             EEEEEecCCCCe
Q psy17682        373 IRYFEITAEPPF  384 (490)
Q Consensus       373 i~iwd~~~~~~~  384 (490)
                      |..++..+++..
T Consensus       313 V~~~~~~~G~~~  324 (400)
T 3p5b_L          313 IFSANRLTGSDV  324 (400)
T ss_dssp             EEEEESSSCCCC
T ss_pred             EEEEEcCCCCce
Confidence            999997777633

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.63  E-value=0.00018  Score=66.14  Aligned_cols=227  Identities=9%  Similarity=0.017  Sum_probs=135.5

Q ss_pred             CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC----CeeEEEEecCCCcEEE
Q psy17682        188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT----GEIMIQIECHPDIVYS  263 (490)
Q Consensus       188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~----~~~~~~~~~~~~~v~~  263 (490)
                      ..|+..++...+....+.        ....+..++|++.+..++++-..++.|..+++..    ......+.........
T Consensus        10 ~~I~~i~~~~~~~~~~~~--------~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g   81 (316)
T 1ijq_A           10 HEVRKMTLDRSEYTSLIP--------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG   81 (316)
T ss_dssp             SSEEEEETTSCCCEEEEC--------SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred             CeEEEEECCCcceEehhc--------CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence            568999987765433221        3456789999987654666666678999999875    2222223222345678


Q ss_pred             EEEcCCCC-EEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeE
Q psy17682        264 ASWNWDGS-KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIV  341 (490)
Q Consensus       264 ~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~  341 (490)
                      +++.+.+. ++++-...+.|.++|+..... ..+..........++++|. +.++++..  +..+.|...+++... ...
T Consensus        82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~iavdp~~g~ly~~d~--~~~~~I~~~~~dG~~-~~~  157 (316)
T 1ijq_A           82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTDW--GTPAKIKKGGLNGVD-IYS  157 (316)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEEECTTCCEEEEEEETTTTEEEEEEC--SSSCEEEEEETTSCC-EEE
T ss_pred             EEEeecCCeEEEEECCCCEEEEEeCCCCce-EEEEECCCCCcceEEeCCCCCEEEEEcc--CCCCeEEEEcCCCCC-eEE
Confidence            99987554 555556778999999875443 3332222234889999986 44555443  123678888876432 112


Q ss_pred             EEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee-eCCCceeeEEEeeCceeEEeecceeEEEE
Q psy17682        342 MVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF-QTPDPQRGIGMMPKRGCDVNSCEIGRFFR  420 (490)
Q Consensus       342 ~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~~~~~~~  420 (490)
                      +.. ........+++++++..||++-+..+.|..+|+.... . +.+... .......++++.. +.+.++.....+++.
T Consensus       158 ~~~-~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~-~~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~V~~  233 (316)
T 1ijq_A          158 LVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-R-KTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFS  233 (316)
T ss_dssp             EEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-C-EEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEE
T ss_pred             EEE-CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-e-EEEeecCCccCCcEEEEEEC-CEEEEEECCCCeEEE
Confidence            211 2234577899999999998888888899999987543 2 222211 1123456788854 555555544445554


Q ss_pred             ec--CCCceEEE
Q psy17682        421 LN--NSGLCQVV  430 (490)
Q Consensus       421 ~~--~~~~~~~i  430 (490)
                      +.  +++.++.+
T Consensus       234 ~~~~~g~~~~~i  245 (316)
T 1ijq_A          234 ANRLTGSDVNLL  245 (316)
T ss_dssp             EETTTCCCCEEE
T ss_pred             EeCCCCcceEEE
Confidence            43  45434443

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.60  E-value=0.00014  Score=75.91  Aligned_cols=341  Identities=9%  Similarity=-0.020  Sum_probs=185.5

Q ss_pred             cceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccc
Q psy17682         44 QRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYV  123 (490)
Q Consensus        44 ~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  123 (490)
                      ...|.++...+++ .+.+ |...+-|.+++..++.+.......    +    ....... .........|.++...++. 
T Consensus       257 ~~~i~~i~~d~~g-~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~----f----~~~~~~~-~~~~l~~~~v~~i~~D~~g-  324 (781)
T 3v9f_A          257 SSYIFSIKQLKDN-KLWI-ATELNGIMILDLQQNQFLLPEQIR----F----EFIREGD-NNYSLSNASARYIFQDSFN-  324 (781)
T ss_dssp             CCCEEEEEECTTS-EEEE-EESSSCEEEEETTCC-------------C----EEECBCS-STTSBSSSCEEEEEECSSC-
T ss_pred             CceEEEEEECCCC-CEEE-EeCCCCeEEECCCCCeeeeeeccc----c----ccccCCC-CCCCCCCCeEEEEEEeCCC-
Confidence            3568888888777 5544 344345677888765432110000    0    0000000 0011122345666665553 


Q ss_pred             cceEEEEEeeCCCceEEEECCCCCCCCcccCCCC-cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccc
Q psy17682        124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINAD-HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISR  202 (490)
Q Consensus       124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~-~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~  202 (490)
                           .++.+..++.|..++.....-..-..... ...-......|.++...++|  .|..|+.++-|..|+..++....
T Consensus       325 -----~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~~  397 (781)
T 3v9f_A          325 -----NIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQG--KLWIGTDGGGINVFENGKRVAIY  397 (781)
T ss_dssp             -----CEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTS--CEEEEEBSSCEEEEETTEEEEEC
T ss_pred             -----CEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCC--CEEEEeCCCcEEEEECCCCeEEE
Confidence                 46667766777777654110000000000 00001123579999998876  35566666678899976543211


Q ss_pred             ccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe---cCCCcEEEEEEcCCCCEEEEEeCC
Q psy17682        203 TLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE---CHPDIVYSASWNWDGSKLLTTCKD  279 (490)
Q Consensus       203 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d  279 (490)
                       +..+   .......|.++...+++.  |..|+.++-|..+|..+++.. .+.   .....|.++...++++ |..|+. 
T Consensus       398 -~~~~---~~~~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~-lwigt~-  468 (781)
T 3v9f_A          398 -NKEN---RELLSNSVLCSLKDSEGN--LWFGTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKK-IWIGTH-  468 (781)
T ss_dssp             -C--------CCCSBEEEEEECTTSC--EEEEETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSE-EEEEET-
T ss_pred             -ccCC---CCCCCcceEEEEECCCCC--EEEEeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCC-EEEEEC-
Confidence             1110   012346789998887774  555777677899998776543 332   1346789998888776 444555 


Q ss_pred             CeEEEEeCCCCceeeeeeec----CCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc---CCCcee
Q psy17682        280 KKMRIINPRTGAIEEEAVCH----EGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD---TSNGVM  352 (490)
Q Consensus       280 g~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~---~~~~i~  352 (490)
                      +-|..||..+++........    ....+.++...++|.+.+...    .+-+..+|..+..  .......   ....|.
T Consensus       469 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~----~~Gl~~~~~~~~~--~~~~~~~~~l~~~~i~  542 (781)
T 3v9f_A          469 AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF----GGGVGIYTPDMQL--VRKFNQYEGFCSNTIN  542 (781)
T ss_dssp             TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES----SSCEEEECTTCCE--EEEECTTTTCSCSCEE
T ss_pred             CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc----CCCEEEEeCCCCe--EEEccCCCCCCCCeeE
Confidence            56899998876543322211    123488888888898776543    2346778876532  1111111   124578


Q ss_pred             eeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee--CCCceeeEEEeeCceeEEeecceeEEEEec
Q psy17682        353 FPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ--TPDPQRGIGMMPKRGCDVNSCEIGRFFRLN  422 (490)
Q Consensus       353 ~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~  422 (490)
                      ++..+++|+.. ++. .+|.|..||..+++ +. ......  ....|.++...++|.+-+++..-+..++..
T Consensus       543 ~i~~d~~g~lW-i~T-~~Glv~~~d~~~~~-~~-~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~~  610 (781)
T 3v9f_A          543 QIYRSSKGQMW-LAT-GEGLVCFPSARNFD-YQ-VFQRKEGLPNTHIRAISEDKNGNIWASTNTGISCYITS  610 (781)
T ss_dssp             EEEECTTSCEE-EEE-TTEEEEESCTTTCC-CE-EECGGGTCSCCCCCEEEECSSSCEEEECSSCEEEEETT
T ss_pred             EEEECCCCCEE-EEE-CCCceEEECCCCCc-EE-EccccCCCCCceEEEEEECCCCCEEEEcCCceEEEECC
Confidence            88888999876 433 36665888887765 22 222111  124578888888888777665444444443

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.58  E-value=0.00029  Score=73.53  Aligned_cols=329  Identities=10%  Similarity=-0.024  Sum_probs=178.2

Q ss_pred             ceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccccc
Q psy17682         45 RRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVK  124 (490)
Q Consensus        45 ~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  124 (490)
                      ..|.++...+++ .+.+.. .+ -+.++|..++.+....               .. ...........|.++...++.  
T Consensus       211 ~~i~~i~~d~~g-~lwigt-~~-Gl~~~d~~~~~~~~~~---------------~~-~~~~~~l~~~~i~~i~~d~~g--  269 (781)
T 3v9f_A          211 NDVRCIYKDTNG-NIWIGT-SK-GLALFNANTETFTNFH---------------NN-PGNIHGALSSYIFSIKQLKDN--  269 (781)
T ss_dssp             SSEEEEEECTTC-CEEEEE-TT-EEEEEETTTTEEEC---------------------------CCCCEEEEEECTTS--
T ss_pred             CceeEEEEcCCC-CEEEEe-CC-cHheECCCCCcEEEEE---------------cC-CCccccccCceEEEEEECCCC--
Confidence            457888877777 555533 33 5778887664321100               00 000000112245666665553  


Q ss_pred             ceEEEEEeeCCCceEEEECCCCCCCCcccCC------CCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCC
Q psy17682        125 EFKEEIRKLKSQQALSILPPPSTAPNTGRIN------ADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG  198 (490)
Q Consensus       125 ~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~------~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~  198 (490)
                          .++.+...+.+.+++........-...      .....-.-....|.++...++|  .|..|+.++-|..++..+.
T Consensus       270 ----~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g--~lWigt~~~Gl~~~~~~~~  343 (781)
T 3v9f_A          270 ----KLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFN--NIWIGTWGGGINFISNAPP  343 (781)
T ss_dssp             ----EEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSC--CEEEEEBSSCEEEECSSCC
T ss_pred             ----CEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCC--CEEEEecCCeEEEeCCCCC
Confidence                455566545667776542110000000      0000001234679999999877  3666776777889987655


Q ss_pred             Ccccccccce--eeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEE---ecCCCcEEEEEEcCCCCEE
Q psy17682        199 GISRTLTEPV--VDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI---ECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       199 ~~~~~~~~~~--~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l  273 (490)
                      ........+.  .........|.++...+++.  |..|+.++-|..||..+++.....   ......|.++...+++.+ 
T Consensus       344 ~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-  420 (781)
T 3v9f_A          344 TFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK--LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNL-  420 (781)
T ss_dssp             SCEEEC----CCCSSCCSSSCEEEEEECTTSC--EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCE-
T ss_pred             cceeeccCccccccCCCCCcceEEEEEcCCCC--EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCE-
Confidence            4322100000  00011335689998888774  566666666889998654322111   123467899988877764 


Q ss_pred             EEEeCCCeEEEEeCCCCceeeeee-ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc----CC
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEAV-CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD----TS  348 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~----~~  348 (490)
                      ..|+.++.|..+|..+++...... ......+.++...++|.+.+..    . +.+..+|..+..... .....    ..
T Consensus       421 Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt----~-~Gl~~~~~~~~~~~~-~~~~~~~~~~~  494 (781)
T 3v9f_A          421 WFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGT----H-AGVFVIDLASKKVIH-HYDTSNSQLLE  494 (781)
T ss_dssp             EEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEE----T-TEEEEEESSSSSCCE-EECTTTSSCSC
T ss_pred             EEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEE----C-CceEEEeCCCCeEEe-cccCccccccc
Confidence            457776789999987765432211 1122348888888888766543    2 457888877644322 22111    13


Q ss_pred             CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee--CCCceeeEEEeeCceeEEeec
Q psy17682        349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ--TPDPQRGIGMMPKRGCDVNSC  413 (490)
Q Consensus       349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~  413 (490)
                      ..|.++...++|+.. + |+.++-+..||..+++ +. ......  ....|.++...++|.+.+++.
T Consensus       495 ~~i~~i~~d~~g~lW-i-gt~~~Gl~~~~~~~~~-~~-~~~~~~~l~~~~i~~i~~d~~g~lWi~T~  557 (781)
T 3v9f_A          495 NFVRSIAQDSEGRFW-I-GTFGGGVGIYTPDMQL-VR-KFNQYEGFCSNTINQIYRSSKGQMWLATG  557 (781)
T ss_dssp             SCEEEEEECTTCCEE-E-EESSSCEEEECTTCCE-EE-EECTTTTCSCSCEEEEEECTTSCEEEEET
T ss_pred             ceeEEEEEcCCCCEE-E-EEcCCCEEEEeCCCCe-EE-EccCCCCCCCCeeEEEEECCCCCEEEEEC
Confidence            458888899999876 3 3333447778876553 21 111100  124578888888887666554

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.57  E-value=6.2e-06  Score=84.31  Aligned_cols=235  Identities=11%  Similarity=0.035  Sum_probs=126.9

Q ss_pred             CeeEEEECCCCCCEEEEEe-CCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe-CC-----Cc
Q psy17682        167 PVLDIAWSPHDDNVIASGS-EDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG-SD-----NN  239 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~d-----g~  239 (490)
                      ...++++.+++ .+++.|+ .+..+.+||..+++-...-.     +. ....-.+++..++++ +++.|+ .+     ..
T Consensus       244 ~~~~~~~~~~g-~lyv~GG~~~~~v~~yd~~t~~W~~~~~-----~~-~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~  315 (656)
T 1k3i_A          244 FCPGISMDGNG-QIVVTGGNDAKKTSLYDSSSDSWIPGPD-----MQ-VARGYQSSATMSDGR-VFTIGGSWSGGVFEKN  315 (656)
T ss_dssp             SSCEEEECTTS-CEEEECSSSTTCEEEEEGGGTEEEECCC-----CS-SCCSSCEEEECTTSC-EEEECCCCCSSSCCCC
T ss_pred             ccccccCCCCC-CEEEeCCCCCCceEEecCcCCceeECCC-----CC-ccccccceEEecCCe-EEEEeCcccCCccccc
Confidence            34456777777 7888887 45689999987654322111     11 111113455566775 888888 34     56


Q ss_pred             EEEEECCCCeeEEEEec-----CCCcEEEEEEcCCCCEEEEEeCC---------CeEEEEeCCCCceeeeeeecCC----
Q psy17682        240 VAIWNVGTGEIMIQIEC-----HPDIVYSASWNWDGSKLLTTCKD---------KKMRIINPRTGAIEEEAVCHEG----  301 (490)
Q Consensus       240 v~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~~----  301 (490)
                      +.+||..+.+-.. +..     ....-....+..++..++.++.+         ..+..||..+............    
T Consensus       316 ~e~yd~~t~~W~~-~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~  394 (656)
T 1k3i_A          316 GEVYSPSSKTWTS-LPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGV  394 (656)
T ss_dssp             EEEEETTTTEEEE-ETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEE
T ss_pred             ceEeCCCCCccee-CCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccccccc
Confidence            8999998765332 210     00000001223455555666544         3567888887764433221111    


Q ss_pred             ----CceeEEEEe-CCCcEEEEEeCCCc--------eeEEEEecCCCCCCCeEEE--eccCCCceeeeeecCCCCeEEEE
Q psy17682        302 ----SKATRAIYL-KSGLIFTTGFSKMS--------ERQYSLRAPDHLDEPIVMV--ELDTSNGVMFPLYDPDTNLVYLC  366 (490)
Q Consensus       302 ----~~~~~~~~s-~~~~~l~~~~~~~~--------~~~i~iwd~~~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~  366 (490)
                          ..-..+.+. .++++++.|+....        ...+.+||..+..-. ...  .......-..++..|+++.+ +.
T Consensus       395 ~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~-~~~~~~mp~~R~~~~~~~l~~g~i~-v~  472 (656)
T 1k3i_A          395 APDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNT-VFASNGLYFARTFHTSVVLPDGSTF-IT  472 (656)
T ss_dssp             CCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEE-EECTTCCSSCCBSCEEEECTTSCEE-EE
T ss_pred             CCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCee-EEccCCCCCCcccCCeEECCCCCEE-EE
Confidence                012334444 47888888863211        116888888764321 111  11222223344567888877 56


Q ss_pred             ecCC-----------CeEEEEEecCCCCeeEEeeeeeCCCc-eeeEEEeeCceeEEeecc
Q psy17682        367 GKGD-----------SVIRYFEITAEPPFVHYINTFQTPDP-QRGIGMMPKRGCDVNSCE  414 (490)
Q Consensus       367 g~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~-i~~~~~sp~~~~l~~~~~  414 (490)
                      |+.+           ..+.+||..+.+  ...+........ .....+.|++++++.|+.
T Consensus       473 GG~~~~~~~~~~~~~~~v~~ydp~t~~--W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          473 GGQRRGIPFEDSTPVFTPEIYVPEQDT--FYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             CCBSBCCTTCCCSBCCCCEEEEGGGTE--EEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             CCcccCcCcCCCCcccceEEEcCCCCc--eeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence            6543           468999998764  222322222212 233456789999888875

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.57  E-value=0.00021  Score=66.64  Aligned_cols=246  Identities=9%  Similarity=-0.022  Sum_probs=145.6

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN  244 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd  244 (490)
                      .+...|.+..++.  +|+.+ ....|+..++........        ......+..++|++.+..++++-...+.|..++
T Consensus        33 ~d~~~C~~~~~~~--~ll~~-~~~~I~~i~~~g~~~~~~--------~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~  101 (349)
T 3v64_C           33 PDRRSCKALGPEP--VLLFA-NRIDIRQVLPHRSEYTLL--------LNNLENAIALDFHHRRELVFWSDVTLDRILRAN  101 (349)
T ss_dssp             TTSSCEEESSSCC--EEEEE-CBSCEEEECTTSCCEEEE--------ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             CCCCcccccccCc--eeEee-cccceEEEeCCCCeeEEe--------ecCCCceEEEEEeccccEEEEEeccCCceEEEe
Confidence            3445566666633  44433 344688888755433221        113345789999987654555655678899999


Q ss_pred             CCCCeeEEEEecCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCC-cEEEEEeCC
Q psy17682        245 VGTGEIMIQIECHPDIVYSASWNWDG-SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG-LIFTTGFSK  322 (490)
Q Consensus       245 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~~~~~  322 (490)
                      +........+.........+++.+.+ +++++-...+.|.+.++..... ..+..........++++|.+ .++.+-.  
T Consensus       102 ~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~l~~P~~iavdp~~g~ly~td~--  178 (349)
T 3v64_C          102 LNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQSLEKPRAIALHPMEGTIYWTDW--  178 (349)
T ss_dssp             TTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECTTCSCEEEEEEETTTTEEEEEEC--
T ss_pred             cCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-EEEEeCCCCCcceEEEecCcCeEEEecc--
Confidence            87655433333233456789998755 4555555678999999875443 22322222347899999864 4444443  


Q ss_pred             CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEE
Q psy17682        323 MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGM  402 (490)
Q Consensus       323 ~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~  402 (490)
                      +..+.|...+++.... ..+. .........++++|++..||++-...+.|..+++..... ...+.  .......++++
T Consensus       179 ~~~~~I~r~~~dG~~~-~~~~-~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~-~~~~~--~~~~~P~giav  253 (349)
T 3v64_C          179 GNTPRIEASSMDGSGR-RIIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVIS--QGLPHPFAITV  253 (349)
T ss_dssp             SSSCEEEEEETTSCSC-EESC-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEC--SSCSSEEEEEE
T ss_pred             CCCCEEEEEeCCCCCc-EEEE-ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce-EEEEe--CCCCCceEEEE
Confidence            1227788888775332 1111 122334688999999999988887888999999875431 11121  11234577888


Q ss_pred             eeCceeEEeecceeEEEEec--CCCceEEE
Q psy17682        403 MPKRGCDVNSCEIGRFFRLN--NSGLCQVV  430 (490)
Q Consensus       403 sp~~~~l~~~~~~~~~~~~~--~~~~~~~i  430 (490)
                       ..+.+.++.....+++.+.  +++....+
T Consensus       254 -~~~~ly~td~~~~~V~~~~~~~G~~~~~i  282 (349)
T 3v64_C          254 -FEDSLYWTDWHTKSINSANKFTGKNQEII  282 (349)
T ss_dssp             -ETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred             -ECCEEEEecCCCCeEEEEEccCCCccEEe
Confidence             4455556654444555554  44433433

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.56  E-value=0.00021  Score=66.58  Aligned_cols=205  Identities=5%  Similarity=-0.098  Sum_probs=129.2

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN  244 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd  244 (490)
                      -..+..++|++.++.++++-...+.|..+++........+.       ........+++.+.+.+++++-...+.|.+.+
T Consensus        72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-------~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~  144 (349)
T 3v64_C           72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-------TGLESPGGLAVDWVHDKLYWTDSGTSRIEVAN  144 (349)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe-------CCCCCccEEEEecCCCeEEEEcCCCCeEEEEc
Confidence            34578999998764666666677899999987654322111       12234578899886655666666678999999


Q ss_pred             CCCCeeEEEEecCCCcEEEEEEcCCCCEEE-EEeCC-CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCC
Q psy17682        245 VGTGEIMIQIECHPDIVYSASWNWDGSKLL-TTCKD-KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSK  322 (490)
Q Consensus       245 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~  322 (490)
                      +........+.........++++|.+..|+ +-... +.|..+++..... ..+....-.....++++|++..|..+.. 
T Consensus       145 ~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~~~~PnGla~d~~~~~lY~aD~-  222 (349)
T 3v64_C          145 LDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-RIIADTHLFWPNGLTIDYAGRRMYWVDA-  222 (349)
T ss_dssp             TTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EESCCSSCSCEEEEEEETTTTEEEEEET-
T ss_pred             CCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc-EEEEECCCCCcceEEEeCCCCEEEEEEC-
Confidence            875443333333445678999999655544 44444 7899888774432 2222222234789999987555544432 


Q ss_pred             CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682        323 MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP  383 (490)
Q Consensus       323 ~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~  383 (490)
                       ..+.|..+|+..... ..+.. ........+++  ++..||++-...+.|..++..+++.
T Consensus       223 -~~~~I~~~~~dG~~~-~~~~~-~~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G~~  278 (349)
T 3v64_C          223 -KHHVIERANLDGSHR-KAVIS-QGLPHPFAITV--FEDSLYWTDWHTKSINSANKFTGKN  278 (349)
T ss_dssp             -TTTEEEEEETTSCSC-EEEEC-SSCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCS
T ss_pred             -CCCEEEEEeCCCCce-EEEEe-CCCCCceEEEE--ECCEEEEecCCCCeEEEEEccCCCc
Confidence             467899999875332 22222 12234566666  3456667777788888888666653

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.55  E-value=0.00015  Score=68.78  Aligned_cols=205  Identities=5%  Similarity=-0.110  Sum_probs=129.4

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN  244 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd  244 (490)
                      ...+..++|++.++.++++-...+.|..+++........+.       ........+++.+.+.+++++-...+.|.+.+
T Consensus       115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-------~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~  187 (386)
T 3v65_B          115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-------TGLESPGGLAVDWVHDKLYWTDSGTSRIEVAN  187 (386)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC-------SSCSCCCCEEEETTTTEEEEEETTTTEEEECB
T ss_pred             CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe-------CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEe
Confidence            45688999998665666676677899999987554322111       12234567888886655666666678899988


Q ss_pred             CCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe-CC-CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCC
Q psy17682        245 VGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KD-KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSK  322 (490)
Q Consensus       245 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~  322 (490)
                      +........+.........+++.|.+..|+.+. .. +.|..+++..... ..+....-.....++++|++..|..+.. 
T Consensus       188 ~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~~~~PnGlavd~~~~~lY~aD~-  265 (386)
T 3v65_B          188 LDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-RIIADTHLFWPNGLTIDYAGRRMYWVDA-  265 (386)
T ss_dssp             TTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSCEEEEEEEGGGTEEEEEET-
T ss_pred             CCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc-EEEEECCCCCeeeEEEeCCCCEEEEEEC-
Confidence            865443333333446688999999666555544 44 6788888875433 2332222223789999987555544432 


Q ss_pred             CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682        323 MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP  383 (490)
Q Consensus       323 ~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~  383 (490)
                       ..+.|..+|+.... ...+.. ........+++  ++..||++-...+.|..++..+++.
T Consensus       266 -~~~~I~~~d~dG~~-~~~~~~-~~~~~P~giav--~~~~ly~td~~~~~V~~~~~~~G~~  321 (386)
T 3v65_B          266 -KHHVIERANLDGSH-RKAVIS-QGLPHPFAITV--FEDSLYWTDWHTKSINSANKFTGKN  321 (386)
T ss_dssp             -TTTEEEEECTTSCS-CEEEEC-SSCSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCS
T ss_pred             -CCCEEEEEeCCCCe-eEEEEE-CCCCCceEEEE--ECCEEEEeeCCCCeEEEEECCCCcc
Confidence             46789999987533 222222 22334566777  3446667777888899888666663

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.55  E-value=0.00022  Score=71.34  Aligned_cols=162  Identities=14%  Similarity=0.113  Sum_probs=99.1

Q ss_pred             CcEEEEECCCCeeEEEEec--CC--------CcEEEEEEc-CCCC---EEEEEeCCCeEEEEeCCCCceeeeeeecC---
Q psy17682        238 NNVAIWNVGTGEIMIQIEC--HP--------DIVYSASWN-WDGS---KLLTTCKDKKMRIINPRTGAIEEEAVCHE---  300 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---  300 (490)
                      +.|.-+|.++|+.+..++.  |.        .++. +... .+|+   .++.++.+|.++++|..+++.+.......   
T Consensus       291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~  369 (582)
T 1flg_A          291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT  369 (582)
T ss_dssp             SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred             ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence            5899999999999988863  21        1221 2222 4674   78889999999999999999876654321   


Q ss_pred             ---------CCc--------------------------------eeEEEEeCCCcEEEEEeC------------------
Q psy17682        301 ---------GSK--------------------------------ATRAIYLKSGLIFTTGFS------------------  321 (490)
Q Consensus       301 ---------~~~--------------------------------~~~~~~s~~~~~l~~~~~------------------  321 (490)
                               +.+                                ...++++|+..++.+...                  
T Consensus       370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~  449 (582)
T 1flg_A          370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA  449 (582)
T ss_dssp             SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred             ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence                     000                                013456666444433221                  


Q ss_pred             ------------CCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEee
Q psy17682        322 ------------KMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYIN  389 (490)
Q Consensus       322 ------------~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~  389 (490)
                                  ....+.|.-||+.+++..-....   ...+..-.....+..+ +.|+.|+.++.||.++++    .+.
T Consensus       450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~---~~~~~~g~~~tagglv-f~g~~dg~l~A~D~~tG~----~lW  521 (582)
T 1flg_A          450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKE---HLPLWAGVLATAGNLV-FTGTGDGYFKAFDAKSGK----ELW  521 (582)
T ss_dssp             CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEE---SSCCCSCCEEETTTEE-EEECTTSEEEEEETTTCC----EEE
T ss_pred             eeccceeecCCCCCCcceEEEEECCCCCEEEEecC---CCCCcccceEeCCCEE-EEECCCCcEEEEECCCCC----EEE
Confidence                        01257899999998764333322   1222222222346666 458899999999999998    344


Q ss_pred             eeeCCCcee--eEEEeeCcee
Q psy17682        390 TFQTPDPQR--GIGMMPKRGC  408 (490)
Q Consensus       390 ~~~~~~~i~--~~~~sp~~~~  408 (490)
                      .+..+..+.  -+.+..+|+.
T Consensus       522 ~~~~~~g~~a~P~~y~~~G~q  542 (582)
T 1flg_A          522 KFQTGSGIVSPPITWEQDGEQ  542 (582)
T ss_dssp             EEECSSCCCSCCEEEEETTEE
T ss_pred             EecCCCCcccCceEEEECCEE
Confidence            444333333  3677788864

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.55  E-value=2.7e-05  Score=67.43  Aligned_cols=194  Identities=11%  Similarity=0.013  Sum_probs=122.7

Q ss_pred             cCEEEEEEeeCCCCEEEEEeCCC--cEEEEECCCCeeEEEEecCCCc-EEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy17682        216 RRVGLVLWHPTAQNVLLTAGSDN--NVAIWNVGTGEIMIQIECHPDI-VYSASWNWDGSKLLTTCKDKKMRIINPRTGAI  292 (490)
Q Consensus       216 ~~v~~~~~~p~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  292 (490)
                      .....+.|++ + .++.+.+.+|  .|+.+|+.+++.+.++...... -..++.. .++.++..-.++.+.+||..+.+.
T Consensus        21 ~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~   97 (243)
T 3mbr_X           21 AFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTP   97 (243)
T ss_dssp             CCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEE
T ss_pred             cccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcE
Confidence            3467899986 4 4777777754  8999999999998888632221 1234443 234444445789999999999999


Q ss_pred             eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC---CceeeeeecCCCCeEEEEecC
Q psy17682        293 EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS---NGVMFPLYDPDTNLVYLCGKG  369 (490)
Q Consensus       293 ~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~---~~i~~~~~s~~~~~l~~~g~~  369 (490)
                      +.++.....  -..+  .+++..|..+.   ..+.|.++|..+.+....+....+.   ..++.+.+. +|+ |++....
T Consensus        98 ~~ti~~~~~--Gwgl--t~dg~~L~vSd---gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~-lyanvw~  168 (243)
T 3mbr_X           98 RARFRYPGE--GWAL--TSDDSHLYMSD---GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE-LLANVWL  168 (243)
T ss_dssp             EEEEECSSC--CCEE--EECSSCEEEEC---SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETT
T ss_pred             EEEEeCCCC--ceEE--eeCCCEEEEEC---CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE-EEEEECC
Confidence            998874332  2333  35666555554   3678999999987643333221221   234455554 554 6566666


Q ss_pred             CCeEEEEEecCCCCeeEEeeee-----------eCCCceeeEEEeeCc-eeEEeecceeEEEEec
Q psy17682        370 DSVIRYFEITAEPPFVHYINTF-----------QTPDPQRGIGMMPKR-GCDVNSCEIGRFFRLN  422 (490)
Q Consensus       370 dg~i~iwd~~~~~~~~~~~~~~-----------~~~~~i~~~~~sp~~-~~l~~~~~~~~~~~~~  422 (490)
                      +..|.+.|..+++ ....+..-           ....-.+++|++|++ ++++++-.--++|.+.
T Consensus       169 s~~I~vIDp~tG~-V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~  232 (243)
T 3mbr_X          169 TSRIARIDPASGK-VVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIR  232 (243)
T ss_dssp             TTEEEEECTTTCB-EEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred             CCeEEEEECCCCC-EEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEE
Confidence            7799999999987 22222211           111346899999975 5566665555666543

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.52  E-value=4.5e-05  Score=69.87  Aligned_cols=199  Identities=8%  Similarity=-0.013  Sum_probs=121.1

Q ss_pred             cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC--CeEEEEeCCCCcee
Q psy17682        216 RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD--KKMRIINPRTGAIE  293 (490)
Q Consensus       216 ~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~  293 (490)
                      ....+++|++++. ++++-..++.|..||... +....+. .......+++.++|+++++....  ..|..+|..+++..
T Consensus        32 ~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~  108 (306)
T 2p4o_A           32 TFLENLASAPDGT-IFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE  108 (306)
T ss_dssp             CCEEEEEECTTSC-EEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred             CCcceEEECCCCC-EEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence            4567899999885 777766789999999865 3333333 34578899999999976665433  24777887777654


Q ss_pred             eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe--------ccCCCceeeeeecCCCCeEEE
Q psy17682        294 EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE--------LDTSNGVMFPLYDPDTNLVYL  365 (490)
Q Consensus       294 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~--------~~~~~~i~~~~~s~~~~~l~~  365 (490)
                      .............++..+++..+++..   ..+.|.++|............        .........+  +|+++.||+
T Consensus       109 ~~~~~~~~~~~~g~~~~~~~~~~v~d~---~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv  183 (306)
T 2p4o_A          109 TLLTLPDAIFLNGITPLSDTQYLTADS---YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYV  183 (306)
T ss_dssp             EEEECTTCSCEEEEEESSSSEEEEEET---TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEE
T ss_pred             EEEeCCCccccCcccccCCCcEEEEEC---CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEE
Confidence            332222222244555556666555543   356788888764311010000        0111123444  889999988


Q ss_pred             EecCCCeEEEEEecC-CCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecCC
Q psy17682        366 CGKGDSVIRYFEITA-EPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNS  424 (490)
Q Consensus       366 ~g~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~  424 (490)
                      +-...+.|..|++.. ++ + .....+.......+++++++|.+.++.....++..++..
T Consensus       184 ~d~~~~~I~~~~~~~~g~-~-~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~  241 (306)
T 2p4o_A          184 SNTEKMLLLRIPVDSTDK-P-GEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD  241 (306)
T ss_dssp             EETTTTEEEEEEBCTTSC-B-CCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred             EeCCCCEEEEEEeCCCCC-C-CccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence            888889999999975 32 1 111111111356789999999887776444455555443

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.51  E-value=7.5e-05  Score=68.88  Aligned_cols=199  Identities=12%  Similarity=0.077  Sum_probs=125.8

Q ss_pred             CEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec--------------------CCCcEEEEEEcC-CCCEEEE
Q psy17682        217 RVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC--------------------HPDIVYSASWNW-DGSKLLT  275 (490)
Q Consensus       217 ~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--------------------~~~~v~~~~~~~-~~~~l~~  275 (490)
                      ...+++|.+++. +++++..++.|..|+..+++.. .+..                    ....+..+++.+ +++ |++
T Consensus        20 ~p~~i~~d~~g~-~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v   96 (322)
T 2fp8_A           20 APNSFTFDSTNK-GFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYI   96 (322)
T ss_dssp             CCCCEECCTTCS-SEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEE
T ss_pred             CceEEEEcCCCC-EEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEE
Confidence            456788999874 6778888899999998765432 2221                    013578999998 554 555


Q ss_pred             EeCCCeEEEEeCCCCceeeeee----ecCCCceeEEEEeC-CCcEEEEEeCC--------------CceeEEEEecCCCC
Q psy17682        276 TCKDKKMRIINPRTGAIEEEAV----CHEGSKATRAIYLK-SGLIFTTGFSK--------------MSERQYSLRAPDHL  336 (490)
Q Consensus       276 ~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~s~-~~~~l~~~~~~--------------~~~~~i~iwd~~~~  336 (490)
                      +...+.|..+|..+++. ..+.    +........+++.+ +|++.++-...              ...+.|..+|..+.
T Consensus        97 ~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~  175 (322)
T 2fp8_A           97 VDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK  175 (322)
T ss_dssp             EETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred             EECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence            55556688999775532 2221    11112367899999 99877765320              12477888887654


Q ss_pred             CCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC-eeEEeeeeeCCCceeeEEEeeCceeEEeecc-
Q psy17682        337 DEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP-FVHYINTFQTPDPQRGIGMMPKRGCDVNSCE-  414 (490)
Q Consensus       337 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-  414 (490)
                      ........   ......++++|+|+.|+++-...+.|.+|++..... ..+.+..  ... ..++++.++|.+.++... 
T Consensus       176 ~~~~~~~~---~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~~G~l~va~~~~  249 (322)
T 2fp8_A          176 ETTLLLKE---LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNADGHFWVSSSEE  249 (322)
T ss_dssp             EEEEEEEE---ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--CSS-EEEEEECTTSCEEEEEEEE
T ss_pred             EEEEeccC---CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe--CCC-CCCeEECCCCCEEEEecCc
Confidence            32111111   123467899999998877777788999999875321 1112221  122 788999999987666543 


Q ss_pred             ---------eeEEEEecCCC
Q psy17682        415 ---------IGRFFRLNNSG  425 (490)
Q Consensus       415 ---------~~~~~~~~~~~  425 (490)
                               ..+++.++...
T Consensus       250 ~~~~~~~~~~~~v~~~d~~G  269 (322)
T 2fp8_A          250 LDGNMHGRVDPKGIKFDEFG  269 (322)
T ss_dssp             TTSSTTSCEEEEEEEECTTS
T ss_pred             ccccccCCCccEEEEECCCC
Confidence                     45677776544

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.51  E-value=0.00031  Score=66.48  Aligned_cols=244  Identities=8%  Similarity=-0.050  Sum_probs=144.4

Q ss_pred             eeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC
Q psy17682        168 VLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT  247 (490)
Q Consensus       168 V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~  247 (490)
                      -.|.+..+.  .+|+.+. ...|+..++.........        .....+..++|++.+..++++-...+.|..+++..
T Consensus        79 ~~C~~~~~~--~~l~~~~-~~~I~~i~~~~~~~~~~~--------~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g  147 (386)
T 3v65_B           79 RSCKALGPE--PVLLFAN-RIDIRQVLPHRSEYTLLL--------NNLENAIALDFHHRRELVFWSDVTLDRILRANLNG  147 (386)
T ss_dssp             SCEEECSSC--CEEEEEC-BSCEEEECTTSCCCEEEE--------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CeECCcccc--ceeEeec-CccceeeccCCCcEEEEe--------cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence            345555552  3444333 457888887655432221        13345789999987654666656678899999876


Q ss_pred             CeeEEEEecCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCcee
Q psy17682        248 GEIMIQIECHPDIVYSASWNWDGS-KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSER  326 (490)
Q Consensus       248 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~  326 (490)
                      ......+.........+++.+.+. ++++-...+.|.+.++...... .+..........++++|.+..|..... +..+
T Consensus       148 ~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~-~l~~~~l~~P~giavdp~~g~ly~td~-~~~~  225 (386)
T 3v65_B          148 SNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK-VLLWQSLEKPRAIALHPMEGTIYWTDW-GNTP  225 (386)
T ss_dssp             CCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE-EEECSSCSCEEEEEEETTTTEEEEEEC-SSSC
T ss_pred             CCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE-EeecCCCCCCcEEEEEcCCCeEEEecc-CCCC
Confidence            654333333334456788987554 5555556788999988754432 232222234789999987554443331 1237


Q ss_pred             EEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCc
Q psy17682        327 QYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKR  406 (490)
Q Consensus       327 ~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~  406 (490)
                      .|...+++.... ..+.. ........++++|++..||++-+..+.|..+++..... ...+.  .......++++ ..+
T Consensus       226 ~I~r~~~dG~~~-~~~~~-~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~--~~~~~P~giav-~~~  299 (386)
T 3v65_B          226 RIEASSMDGSGR-RIIAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVIS--QGLPHPFAITV-FED  299 (386)
T ss_dssp             EEEEEETTSCSC-EEEEC-SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC-EEEEC--SSCSSEEEEEE-ETT
T ss_pred             EEEEEeCCCCCc-EEEEE-CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee-EEEEE--CCCCCceEEEE-ECC
Confidence            788888875332 22221 22344688999999988888888888999999875431 11221  11234578888 444


Q ss_pred             eeEEeecceeEEEEec--CCCceEEE
Q psy17682        407 GCDVNSCEIGRFFRLN--NSGLCQVV  430 (490)
Q Consensus       407 ~~l~~~~~~~~~~~~~--~~~~~~~i  430 (490)
                      .+.++.-...+++.+.  +++..+.+
T Consensus       300 ~ly~td~~~~~V~~~~~~~G~~~~~i  325 (386)
T 3v65_B          300 SLYWTDWHTKSINSANKFTGKNQEII  325 (386)
T ss_dssp             EEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred             EEEEeeCCCCeEEEEECCCCcceEEE
Confidence            5555554444555543  44434444

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.48  E-value=9.8e-05  Score=64.84  Aligned_cols=202  Identities=9%  Similarity=0.116  Sum_probs=126.3

Q ss_pred             eecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcE
Q psy17682        161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNV  240 (490)
Q Consensus       161 ~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v  240 (490)
                      +.+-.+.+..++|+|+++.++++...++.|...|.. ++.++.+.     +.+ ......+++.+++. ++++.-.++.+
T Consensus        22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~-----l~g-~~D~EGIa~~~~g~-~~vs~E~~~~l   93 (255)
T 3qqz_A           22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIP-----LDF-VKDLETIEYIGDNQ-FVISDERDYAI   93 (255)
T ss_dssp             CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEE-----CSS-CSSEEEEEECSTTE-EEEEETTTTEE
T ss_pred             CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEe-----cCC-CCChHHeEEeCCCE-EEEEECCCCcE
Confidence            335556899999999875677778888999999987 77666543     222 24578889988874 55665567889


Q ss_pred             EEEECCCCee---EEEEe------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC---CCceeeeeee------cCCC
Q psy17682        241 AIWNVGTGEI---MIQIE------CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPR---TGAIEEEAVC------HEGS  302 (490)
Q Consensus       241 ~iwd~~~~~~---~~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~------~~~~  302 (490)
                      .++++.....   +....      ........++|+|.++.|+++.......+|.+.   ....+.....      ..-.
T Consensus        94 ~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~  173 (255)
T 3qqz_A           94 YVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLD  173 (255)
T ss_dssp             EEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSS
T ss_pred             EEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccC
Confidence            9998765432   22222      123446899999998777777655444444443   1111222211      0112


Q ss_pred             ceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCC--------CceeeeeecCCCCeEEEEecCCCeE
Q psy17682        303 KATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTS--------NGVMFPLYDPDTNLVYLCGKGDSVI  373 (490)
Q Consensus       303 ~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~--------~~i~~~~~s~~~~~l~~~g~~dg~i  373 (490)
                      .+..++++|. +++++.+.   ..+.+.++|....  +.....+...        ...-.++|.++|+ ||++ +..+.+
T Consensus       174 d~S~l~~dp~tg~lliLS~---~s~~L~~~d~~g~--~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv-sE~n~~  246 (255)
T 3qqz_A          174 DVSGAEFNQQKNTLLVLSH---ESRALQEVTLVGE--VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV-SEPNRF  246 (255)
T ss_dssp             CCCEEEEETTTTEEEEEET---TTTEEEEECTTCC--EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEE-ETTTEE
T ss_pred             CceeEEEcCCCCeEEEEEC---CCCeEEEEcCCCC--EEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEE-cCCceE
Confidence            3789999998 55555554   5678888887743  3333333321        2357889999997 4455 455666


Q ss_pred             EEEE
Q psy17682        374 RYFE  377 (490)
Q Consensus       374 ~iwd  377 (490)
                      +.|.
T Consensus       247 y~f~  250 (255)
T 3qqz_A          247 YRFT  250 (255)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            6554

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.47  E-value=2.4e-05  Score=79.82  Aligned_cols=235  Identities=10%  Similarity=0.043  Sum_probs=144.1

Q ss_pred             CEEEEEeCCCcEEEEECCCCCccccccccee--eecccccCEEEEEEeeCCCCEEEEEeC------CCcEEEEECCCCee
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVV--DLLYHQRRVGLVLWHPTAQNVLLTAGS------DNNVAIWNVGTGEI  250 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~p~~~~~l~s~~~------dg~v~iwd~~~~~~  250 (490)
                      ..++.++.|+.|..+|..+|+.+........  .......++    . .++  .++++..      +|.|..+|.++|+.
T Consensus       118 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~----v-~~~--~v~vg~~~~~~~~~g~v~a~D~~tG~~  190 (668)
T 1kv9_A          118 DKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPR----V-VKG--KVIIGNGGAEYGVRGFVSAYDADTGKL  190 (668)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCE----E-ETT--EEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred             CEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCE----E-ECC--EEEEeCCCCCcCCCCEEEEEECCCCcE
Confidence            4778888899999999999988765432100  000011111    1 133  4555432      58999999999999


Q ss_pred             EEEEecCC---C----------------------------cEEEEEEcCCCCEEEEEeCCC-------------------
Q psy17682        251 MIQIECHP---D----------------------------IVYSASWNWDGSKLLTTCKDK-------------------  280 (490)
Q Consensus       251 ~~~~~~~~---~----------------------------~v~~~~~~~~~~~l~~~~~dg-------------------  280 (490)
                      +.++....   .                            ....+++.|+...++.++.++                   
T Consensus       191 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~  270 (668)
T 1kv9_A          191 AWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLS  270 (668)
T ss_dssp             EEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred             EEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence            98875211   0                            012468888888888888766                   


Q ss_pred             eEEEEeCCCCceeeeeeec--CC------CceeEEEEeCCCc---EEEEEeCCCceeEEEEecCCCCCCCeEEEecc---
Q psy17682        281 KMRIINPRTGAIEEEAVCH--EG------SKATRAIYLKSGL---IFTTGFSKMSERQYSLRAPDHLDEPIVMVELD---  346 (490)
Q Consensus       281 ~i~iwd~~~~~~~~~~~~~--~~------~~~~~~~~s~~~~---~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~---  346 (490)
                      .|..+|.++++.+..+...  ..      .+.....+..+|+   .++.++   .++.++++|..+++.........   
T Consensus       271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~---~~G~l~~lD~~tG~~l~~~~~~~~~w  347 (668)
T 1kv9_A          271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAP---KNGFFYVLDRTNGKLISAEKFGKVTW  347 (668)
T ss_dssp             EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECC---TTSEEEEEETTTCCEEEEEESSCCCS
T ss_pred             eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEEC---CCCEEEEEECCCCCEecccccccccc
Confidence            4999999999998887632  10      1223333334665   566666   68999999998876432111100   


Q ss_pred             -------CCC------------------------ceeeeeecCCCCeEEEE-----------------------------
Q psy17682        347 -------TSN------------------------GVMFPLYDPDTNLVYLC-----------------------------  366 (490)
Q Consensus       347 -------~~~------------------------~i~~~~~s~~~~~l~~~-----------------------------  366 (490)
                             ...                        .-..++++|+...+|+.                             
T Consensus       348 ~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  427 (668)
T 1kv9_A          348 AEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFAD  427 (668)
T ss_dssp             EEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGG
T ss_pred             ccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccc
Confidence                   000                        01126788887777652                             


Q ss_pred             ------ecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCCce
Q psy17682        367 ------GKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSGLC  427 (490)
Q Consensus       367 ------g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~~~  427 (490)
                            ...+|.|..||+.+++    .+-.+....+.....+...+.+++.+  ++.++.|+..+++.+
T Consensus       428 ~~~~p~~~~~g~l~A~D~~tG~----~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l  492 (668)
T 1kv9_A          428 ATDVPAAVVSGALLAWDPVKQK----AAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL  492 (668)
T ss_dssp             CCCCCGGGCEEEEEEEETTTTE----EEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred             cCCCCCCCccceEEEEeCCCCc----EEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence                  1134889999999997    33333333455555566665555555  457777887777633

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=98.47  E-value=0.00022  Score=66.62  Aligned_cols=235  Identities=13%  Similarity=0.104  Sum_probs=127.2

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC---CCCEEEEEeCC----
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT---AQNVLLTAGSD----  237 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~d----  237 (490)
                      -...+.++|.|+| ++++ +..+|.|.+++  +++.......+  ...........++++|+   +..++++-...    
T Consensus        30 l~~P~~ia~~pdG-~l~V-~e~~g~I~~i~--~g~~~~~~~~~--v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~  103 (352)
T 2ism_A           30 LEVPWALAFLPDG-GMLI-AERPGRIRLFR--EGRLSTYAELS--VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL  103 (352)
T ss_dssp             CSCEEEEEECTTS-CEEE-EETTTEEEEEE--TTEEEEEEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred             CCCceEEEEcCCC-eEEE-EeCCCeEEEEE--CCCccEeecce--EeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence            3456799999998 5544 45679999998  33321110011  11123456899999998   44344444332    


Q ss_pred             -CcEEEEECCCCe-----eE-EEEe---cCCCcEEEEEEcCCCCEEEEEeC-------------CCeEEEEeCCCC----
Q psy17682        238 -NNVAIWNVGTGE-----IM-IQIE---CHPDIVYSASWNWDGSKLLTTCK-------------DKKMRIINPRTG----  290 (490)
Q Consensus       238 -g~v~iwd~~~~~-----~~-~~~~---~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~----  290 (490)
                       +.|..++...+.     .+ ..+.   ........++|.|+|.++++.+.             .|.|.-++....    
T Consensus       104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~  183 (352)
T 2ism_A          104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPG  183 (352)
T ss_dssp             EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTT
T ss_pred             ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCC
Confidence             568888876431     12 1232   11123468999999976666432             256777776531    


Q ss_pred             --------ceeeee-eecCCCceeEEEEeC-CCcEEEEEeCCCcee-------EEEEecCCC--------C-------CC
Q psy17682        291 --------AIEEEA-VCHEGSKATRAIYLK-SGLIFTTGFSKMSER-------QYSLRAPDH--------L-------DE  338 (490)
Q Consensus       291 --------~~~~~~-~~~~~~~~~~~~~s~-~~~~l~~~~~~~~~~-------~i~iwd~~~--------~-------~~  338 (490)
                              .....+ .++..  ...++|+| +|.++++-..  .+.       .|.+.....        .       ..
T Consensus       184 npf~~~~~~~~~i~a~G~rn--p~g~a~d~~~g~l~v~d~g--~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~  259 (352)
T 2ism_A          184 NPFLGRRGARPEVYSLGHRN--PQGLAWHPKTGELFSSEHG--PSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRD  259 (352)
T ss_dssp             CTTTTCTTSCTTEEEECCSE--ECCCEECTTTCCEEEEEEC--C------CCCEEEEECTTCBCCTTTCCSCCCCTTSCC
T ss_pred             CcccCCCCCCccEEEEcCCC--cccEEEECCCCCEEEEEcC--CCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcC
Confidence                    011111 12322  67789999 6777665432  122       233322111        0       01


Q ss_pred             CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCee---EEeeeeeCCCceeeEEEeeCceeEEeec
Q psy17682        339 PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFV---HYINTFQTPDPQRGIGMMPKRGCDVNSC  413 (490)
Q Consensus       339 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~---~~~~~~~~~~~i~~~~~sp~~~~l~~~~  413 (490)
                      +.  ....+......++| .+|.. +++....+.|...++.......   .....+.....+.++++.|||.+.++..
T Consensus       260 p~--~~~~~~~ap~G~~~-~~G~l-~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~  333 (352)
T 2ism_A          260 PL--YFWPQGFPPGNLAF-FRGDL-YVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS  333 (352)
T ss_dssp             CS--EECTTCCCEEEEEE-ETTEE-EEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred             Ce--EecCCCCCCcceEE-ECCEE-EEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence            11  11222334566777 45554 4666667788888887554211   1111112235789999999998777664

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.45  E-value=0.00053  Score=70.78  Aligned_cols=214  Identities=7%  Similarity=-0.168  Sum_probs=131.7

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEE
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAI  242 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~i  242 (490)
                      .....+..|+|.+.++.++++-...+.|+.+++........   ....+.........|++.+.+.+++++-...+.|.+
T Consensus       421 ~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~---~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v  497 (791)
T 3m0c_C          421 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS---YDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSV  497 (791)
T ss_dssp             CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred             cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcc---eeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEE
Confidence            34567889999986646666766778899998864321000   011122133456789999887667777777889999


Q ss_pred             EECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe-CC-CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEe
Q psy17682        243 WNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KD-KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       243 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~  320 (490)
                      .++........+.........|++.|.+..|+.+. .. +.|...++..... ..+....-.....+++++.+..|..+.
T Consensus       498 ~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~-~~lv~~~l~~P~GLavD~~~~~LYwaD  576 (791)
T 3m0c_C          498 ADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVD  576 (791)
T ss_dssp             EETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred             EeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce-EEEEeCCCCCceEEEEecCCCeEEEEe
Confidence            99975544333444455688999999765555544 33 6799998875443 333322223488999997755554443


Q ss_pred             CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682        321 SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF  384 (490)
Q Consensus       321 ~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~  384 (490)
                      .  ....|...++....................+++  .+..||++-...+.|...+..+++..
T Consensus       577 ~--~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav--~~~~lYwtD~~~~~I~~~dk~tG~~~  636 (791)
T 3m0c_C          577 S--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRLTGSDV  636 (791)
T ss_dssp             T--TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCCC
T ss_pred             C--CCCcEEEEecCCCceEEEecCCCccCCCCEEEE--eCCEEEEEECCCCEEEEEeCCCCcce
Confidence            2  456889999876443222221111223445555  45578788778888988887777643

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.39  E-value=0.00047  Score=68.91  Aligned_cols=215  Identities=13%  Similarity=0.086  Sum_probs=125.4

Q ss_pred             CCCcEEEEECCCCCcccccccceeeec-----------------------------cc-ccCE-EEEEEeeCCCCEEEEE
Q psy17682        186 EDCVVKVWQIPDGGISRTLTEPVVDLL-----------------------------YH-QRRV-GLVLWHPTAQNVLLTA  234 (490)
Q Consensus       186 ~dg~i~iwd~~~~~~~~~~~~~~~~~~-----------------------------~~-~~~v-~~~~~~p~~~~~l~s~  234 (490)
                      .+|.|+.+|.++++.+..+........                             .+ ...+ ..+++.+... +++.+
T Consensus       180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g-~vy~g  258 (599)
T 1w6s_A          180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTN-LIYFG  258 (599)
T ss_dssp             CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTT-EEEEE
T ss_pred             CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCC-EEEEe
Confidence            379999999999988765432110000                             00 0011 1345666664 66666


Q ss_pred             eCC----------------CcEEEEECCCCeeEEEEecCCC----------cEEEEEEc-CCC---CEEEEEeCCCeEEE
Q psy17682        235 GSD----------------NNVAIWNVGTGEIMIQIECHPD----------IVYSASWN-WDG---SKLLTTCKDKKMRI  284 (490)
Q Consensus       235 ~~d----------------g~v~iwd~~~~~~~~~~~~~~~----------~v~~~~~~-~~~---~~l~~~~~dg~i~i  284 (490)
                      ..+                +.|.-+|.++|+.+..++....          ++. +... .+|   ..++.++.+|.+++
T Consensus       259 ~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~  337 (599)
T 1w6s_A          259 TGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYT  337 (599)
T ss_dssp             CCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEE
T ss_pred             CCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEE
Confidence            554                3799999999999988873221          122 2222 467   46777889999999


Q ss_pred             EeCCCCceeeeeeecC------------CCc--------------------------eeEEEEeCCCcEEEEEeC-----
Q psy17682        285 INPRTGAIEEEAVCHE------------GSK--------------------------ATRAIYLKSGLIFTTGFS-----  321 (490)
Q Consensus       285 wd~~~~~~~~~~~~~~------------~~~--------------------------~~~~~~s~~~~~l~~~~~-----  321 (490)
                      +|.++++.+.......            +.+                          ...++++|+..++.+...     
T Consensus       338 lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~  417 (599)
T 1w6s_A          338 LDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMD  417 (599)
T ss_dssp             EETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEE
T ss_pred             EECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEecccccee
Confidence            9999999877654211            100                          124567777655544310     


Q ss_pred             -------------------------CC------ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC
Q psy17682        322 -------------------------KM------SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD  370 (490)
Q Consensus       322 -------------------------~~------~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d  370 (490)
                                               .+      ..+.|.-||+.+++..-....   ......-.....+..+| .++.|
T Consensus       418 ~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~---~~~~~~g~~~tagg~vf-~gt~d  493 (599)
T 1w6s_A          418 WEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKME---RFAVWGGTMATAGDLVF-YGTLD  493 (599)
T ss_dssp             EEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEE---SSCCCSBCEEETTTEEE-EECTT
T ss_pred             eecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecC---CCCccCcceEecCCEEE-EECCC
Confidence                                     01      247888889888764333221   11122212233566774 58899


Q ss_pred             CeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCcee
Q psy17682        371 SVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGC  408 (490)
Q Consensus       371 g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~  408 (490)
                      +.++.||.++++.+.+.  .........-+.+..+|+.
T Consensus       494 g~l~A~D~~tG~~lW~~--~l~~g~~~~P~~y~~~G~q  529 (599)
T 1w6s_A          494 GYLKARDSDTGDLLWKF--KIPSGAIGYPMTYTHKGTQ  529 (599)
T ss_dssp             SEEEEEETTTCCEEEEE--ECSSCCCSCCEEEEETTEE
T ss_pred             CeEEEEECCCCCEEEEe--eCCCCcEeccEEEEeCCEE
Confidence            99999999999843222  1122222234566677753

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=98.38  E-value=0.00042  Score=64.69  Aligned_cols=252  Identities=10%  Similarity=0.036  Sum_probs=133.1

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC---CCCEEEEEeC-----
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT---AQNVLLTAGS-----  236 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~-----  236 (490)
                      -...+.|+|.|+| +.|+.+...|.|++++. .++....+................++++|+   +..+.++-..     
T Consensus        17 l~~P~~i~~~pdG-~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g   94 (353)
T 2g8s_A           17 LDHPWALAFLPDN-HGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG   94 (353)
T ss_dssp             ESSEEEEEECSTT-CCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred             CCCcEEEEEcCCC-CEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence            3467899999998 52444556799999984 332211111100011113456789999995   4334444332     


Q ss_pred             --CCcEEEEECCCC--e--eEEE-Eec------CCCcEEEEEEcCCCCEEEEEeC-------------CCeEEEEeCCCC
Q psy17682        237 --DNNVAIWNVGTG--E--IMIQ-IEC------HPDIVYSASWNWDGSKLLTTCK-------------DKKMRIINPRTG  290 (490)
Q Consensus       237 --dg~v~iwd~~~~--~--~~~~-~~~------~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~  290 (490)
                        ...|..+++...  .  .... +..      .......++|.|||.++++.+.             .|.|.-++....
T Consensus        95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~  174 (353)
T 2g8s_A           95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE  174 (353)
T ss_dssp             CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred             CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence              235666666432  1  1111 111      1122457999999976666543             246777776532


Q ss_pred             c------------eeeee-eecCCCceeEEEEeC-CCcEEEEEeCCCceeEEEEe--------cCCCC------------
Q psy17682        291 A------------IEEEA-VCHEGSKATRAIYLK-SGLIFTTGFSKMSERQYSLR--------APDHL------------  336 (490)
Q Consensus       291 ~------------~~~~~-~~~~~~~~~~~~~s~-~~~~l~~~~~~~~~~~i~iw--------d~~~~------------  336 (490)
                      -            ....+ .++.+  ...++|+| +|+++++-........|.+.        .....            
T Consensus       175 ~p~~npf~~~~~~~~~i~a~G~rn--p~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~  252 (353)
T 2g8s_A          175 IPDDNPFIKESGVRAEIWSYGIRN--PQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEA  252 (353)
T ss_dssp             CCTTCTTTTSTTSCTTEEEECCSE--EEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTC
T ss_pred             CCCCCCCcCCCCCCccEEEEcCcC--ccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcc
Confidence            0            11111 13332  78899999 67777654311001123221        11000            


Q ss_pred             ---CC---CeEEEeccCCCceeeeeecC-------CCCeEEEEecCCCeEEEEEecCCCCeeEEeeee-eCCCceeeEEE
Q psy17682        337 ---DE---PIVMVELDTSNGVMFPLYDP-------DTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF-QTPDPQRGIGM  402 (490)
Q Consensus       337 ---~~---~~~~~~~~~~~~i~~~~~s~-------~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~i~~~~~  402 (490)
                         ..   ........+......+.|..       +|+++ ++.-..+.|...++..++. ......+ .....+.++++
T Consensus       253 ~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~-v~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~rp~~v~~  330 (353)
T 2g8s_A          253 KGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLF-IGALKDKDVIVMSVNGDKV-TEDGRILTDRGQRIRDVRT  330 (353)
T ss_dssp             CBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEE-EEETTTTEEEEEEEETTEE-EEEEEESGGGCCCEEEEEE
T ss_pred             cCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEE-EEEccCCEEEEEEeCCCeE-eeeEEcccCCCCceeEEEE
Confidence               00   00011112334566677754       45555 6666778888888886532 2111111 12347899999


Q ss_pred             eeCceeEEeec-ceeEEEEec
Q psy17682        403 MPKRGCDVNSC-EIGRFFRLN  422 (490)
Q Consensus       403 sp~~~~l~~~~-~~~~~~~~~  422 (490)
                      .|||.+.++.+ ...+||++.
T Consensus       331 ~pdG~lyv~td~~~g~I~ri~  351 (353)
T 2g8s_A          331 GPDGYLYVLTDESSGELLKVS  351 (353)
T ss_dssp             CTTSCEEEEECSTTEEEEEEE
T ss_pred             CCCCcEEEEEeCCCCEEEEEe
Confidence            99998877654 577888875

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.38  E-value=0.00081  Score=63.92  Aligned_cols=234  Identities=7%  Similarity=-0.017  Sum_probs=138.5

Q ss_pred             EEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC----eeEEEEe
Q psy17682        180 VIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG----EIMIQIE  255 (490)
Q Consensus       180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~  255 (490)
                      +|+.+. ...|+..++........+        .....+..++|++.+..++.+-...+.|..+++...    .....+.
T Consensus        85 ~ll~~~-~~~I~~i~l~~~~~~~~~--------~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~  155 (400)
T 3p5b_L           85 YLFFTN-RHEVRKMTLDRSEYTSLI--------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS  155 (400)
T ss_dssp             EEEEEE-TTEEEEECTTSCSCEEEE--------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC
T ss_pred             eeEEec-cceeEEEccCCcceeEec--------cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe
Confidence            444444 467888888765433221        244568899999876545555556788999998652    2233333


Q ss_pred             cCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCC-cEEEEEeCCCceeEEEEecC
Q psy17682        256 CHPDIVYSASWNW-DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG-LIFTTGFSKMSERQYSLRAP  333 (490)
Q Consensus       256 ~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~~~~~~~~~~i~iwd~  333 (490)
                      ........+++.+ .++++++-...+.|.+.++........+.. .......+++.|.+ .++.+-.  +..+.|...++
T Consensus       156 ~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~-~~~~P~~iavdp~~g~ly~td~--~~~~~I~~~~~  232 (400)
T 3p5b_L          156 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-NGSKPRAIVVDPVHGFMYWTDW--GTPAKIKKGGL  232 (400)
T ss_dssp             SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC-SSCCEEEEEEETTTTEEEEEEC--SSSCCEEEEET
T ss_pred             CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC-CCCCcceEEEecccCeEEEEeC--CCCCEEEEEeC
Confidence            3445678999998 445555556678999999886554333332 22348899999864 4444432  12367888888


Q ss_pred             CCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec
Q psy17682        334 DHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC  413 (490)
Q Consensus       334 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~  413 (490)
                      +.... ..+.. ........+++++++..||++-...+.|..+|+.... ....+..........++++..+ .+.++..
T Consensus       233 dG~~~-~~~~~-~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~l~~P~gl~v~~~-~lywtd~  308 (400)
T 3p5b_L          233 NGVDI-YSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFED-KVFWTDI  308 (400)
T ss_dssp             TSCSC-EEEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC-CEEEEECSSTTSSEEEEEEETT-EEEEEES
T ss_pred             CCCcc-EEEEE-CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc-cEEEEeCCCCCCCCEEEEEeCC-EEEEecC
Confidence            75332 22221 2234578899999999998887778899999987643 2222221111123457777443 4445544


Q ss_pred             ceeEEEEe--cCCCceEE
Q psy17682        414 EIGRFFRL--NNSGLCQV  429 (490)
Q Consensus       414 ~~~~~~~~--~~~~~~~~  429 (490)
                      ...+|+.+  .+++.+..
T Consensus       309 ~~~~V~~~~~~~G~~~~~  326 (400)
T 3p5b_L          309 INEAIFSANRLTGSDVNL  326 (400)
T ss_dssp             SSCSEEEEESSSCCCCEE
T ss_pred             CCCeEEEEEcCCCCceEE
Confidence            43344444  34443333

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.37  E-value=8.6e-05  Score=71.41  Aligned_cols=239  Identities=11%  Similarity=0.104  Sum_probs=132.5

Q ss_pred             CCeeEEEECC-CCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC-CC----c
Q psy17682        166 GPVLDIAWSP-HDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS-DN----N  239 (490)
Q Consensus       166 ~~V~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-dg----~  239 (490)
                      .....|+++| ++ ..|+.+...+.|+.+|+..+.....        .........++|++++. .|+.+.. ++    .
T Consensus       137 ~~P~~lavdp~~~-g~Lyv~d~~~~I~~id~~~~~v~~~--------~~~~~~P~~ia~d~~G~-~lyvad~~~~~~~~~  206 (430)
T 3tc9_A          137 GGAVWLSFDPKNH-NHLYLVGEQHPTRLIDFEKEYVSTV--------YSGLSKVRTICWTHEAD-SMIITNDQNNNDRPN  206 (430)
T ss_dssp             SCCCEEEEETTEE-EEEEEEEBTEEEEEEETTTTEEEEE--------ECCCSCEEEEEECTTSS-EEEEEECCSCTTSEE
T ss_pred             CCCCEEEECCCCC-CeEEEEeCCCcEEEEECCCCEEEEE--------ecCCCCcceEEEeCCCC-EEEEEeCCCCcccce
Confidence            3567889998 34 3455554448899999876543221        11345678999999985 4444443 22    2


Q ss_pred             EEEEECCCCeeE--EEEecCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEE
Q psy17682        240 VAIWNVGTGEIM--IQIECHPDIVYSASWNW-DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIF  316 (490)
Q Consensus       240 v~iwd~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  316 (490)
                      +.+.+. .+...  ..+.. ......++++| ++.++++-..++.|+.++...+................++++|+|++|
T Consensus       207 v~~~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~l  284 (430)
T 3tc9_A          207 NYILTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYA  284 (430)
T ss_dssp             EEEEEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEE
T ss_pred             EEEEeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEE
Confidence            333443 23221  22322 23456788999 677676666788999999987654222222222347889999999955


Q ss_pred             EEEeCCCceeEEEEecCCCCCC----CeEEEec-cC------------CCcee-eeeec--------CCCCeEEEEecCC
Q psy17682        317 TTGFSKMSERQYSLRAPDHLDE----PIVMVEL-DT------------SNGVM-FPLYD--------PDTNLVYLCGKGD  370 (490)
Q Consensus       317 ~~~~~~~~~~~i~iwd~~~~~~----~~~~~~~-~~------------~~~i~-~~~~s--------~~~~~l~~~g~~d  370 (490)
                      .....  ..+.|..++.+....    +..+... ..            ..... .++..        ++| .|+++-...
T Consensus       285 yv~d~--~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g-~lyvaD~~n  361 (430)
T 3tc9_A          285 YIVVV--NQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY-DFYFCDREN  361 (430)
T ss_dssp             EEEET--TTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE-EEEEEEGGG
T ss_pred             EEEEC--CCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCC-eEEEEECCC
Confidence            44432  467788877653211    1122211 00            00112 33332        234 444666667


Q ss_pred             CeEEEEEecCCCCeeEEeee----eeC-----------CCceeeEEEee-CceeEEeecceeEEEEe
Q psy17682        371 SVIRYFEITAEPPFVHYINT----FQT-----------PDPQRGIGMMP-KRGCDVNSCEIGRFFRL  421 (490)
Q Consensus       371 g~i~iwd~~~~~~~~~~~~~----~~~-----------~~~i~~~~~sp-~~~~l~~~~~~~~~~~~  421 (490)
                      +.|+.++ .++. +......    ...           -....+++++| ++.+.++.....++.++
T Consensus       362 ~~I~~i~-~~G~-v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i  426 (430)
T 3tc9_A          362 HCIRILT-PQGR-VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKI  426 (430)
T ss_dssp             TEEEEEC-TTSE-EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred             cEEEEEC-CCCc-EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEE
Confidence            7888887 3342 2222211    000           01468899999 57777766554444443

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.37  E-value=0.0002  Score=68.86  Aligned_cols=240  Identities=9%  Similarity=0.163  Sum_probs=135.1

Q ss_pred             CCeeEEEECCC--CCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC---C-c
Q psy17682        166 GPVLDIAWSPH--DDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD---N-N  239 (490)
Q Consensus       166 ~~V~~~~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d---g-~  239 (490)
                      ....+++|+|+  + ..|+.+...+.|+.++..++......        .......++++++++. ++++....   . .
T Consensus       139 ~~P~gvavd~~s~~-g~Lyv~D~~~~I~~id~~~g~v~~~~--------~~~~~P~giavd~dG~-lyVad~~~~~~~~g  208 (433)
T 4hw6_A          139 DNIWRMMFDPNSNY-DDLYWVGQRDAFRHVDFVNQYVDIKT--------TNIGQCADVNFTLNGD-MVVVDDQSSDTNTG  208 (433)
T ss_dssp             SCCCEEEECTTTTT-CEEEEECBTSCEEEEETTTTEEEEEC--------CCCSCEEEEEECTTCC-EEEEECCSCTTSEE
T ss_pred             CCCceEEEccccCC-CEEEEEeCCCCEEEEECCCCEEEEee--------cCCCCccEEEECCCCC-EEEEcCCCCcccce
Confidence            34678999985  3 34444444489999998766543221        1344689999999996 55554321   1 1


Q ss_pred             EEEEECCCCee-EEEEecCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeeeee-cCCCceeEEEEeCCCcEE
Q psy17682        240 VAIWNVGTGEI-MIQIECHPDIVYSASWNW-DGSKLLTTCKDKKMRIINPRTGAIEEEAVC-HEGSKATRAIYLKSGLIF  316 (490)
Q Consensus       240 v~iwd~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~l  316 (490)
                      +...+...+.. ...+. .......++++| ++.++++-..++.|+.+|..++.....+.. ........++++|+|..|
T Consensus       209 v~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~L  287 (433)
T 4hw6_A          209 IYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWA  287 (433)
T ss_dssp             EEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEE
T ss_pred             EEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEE
Confidence            33333222111 11222 233456788999 677666666778999999987765333321 122224579999999855


Q ss_pred             EEEeCCCceeEEEEecCCCCCC----CeEEEec-cC------------CCceeeeee---------cCCCCeEEEEecCC
Q psy17682        317 TTGFSKMSERQYSLRAPDHLDE----PIVMVEL-DT------------SNGVMFPLY---------DPDTNLVYLCGKGD  370 (490)
Q Consensus       317 ~~~~~~~~~~~i~iwd~~~~~~----~~~~~~~-~~------------~~~i~~~~~---------s~~~~~l~~~g~~d  370 (490)
                      ..+..  ..+.|..++......    +..+... ..            -.....+++         .++|++ +++-...
T Consensus       288 Yvad~--~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~l-yvaD~~n  364 (433)
T 4hw6_A          288 YIIYN--GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDF-YFCDRDS  364 (433)
T ss_dssp             EEEET--TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEE-EEEETTT
T ss_pred             EEEeC--CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcE-EEEECCC
Confidence            44432  467888877653211    1122211 10            112456788         566654 4777777


Q ss_pred             CeEEEEEecCCCCeeEEeee-------eeC--------CCceeeEEEe-eCceeEEeecceeEEEEe
Q psy17682        371 SVIRYFEITAEPPFVHYINT-------FQT--------PDPQRGIGMM-PKRGCDVNSCEIGRFFRL  421 (490)
Q Consensus       371 g~i~iwd~~~~~~~~~~~~~-------~~~--------~~~i~~~~~s-p~~~~l~~~~~~~~~~~~  421 (490)
                      +.|+.++. ++. +......       +..        -....+|+++ +++.+.++.....++.++
T Consensus       365 ~~I~~~~~-~G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i  429 (433)
T 4hw6_A          365 HTVRVLTP-EGR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKI  429 (433)
T ss_dssp             TEEEEECT-TSE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred             CEEEEECC-CCC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEE
Confidence            88998874 332 2211111       000        0235789999 677777766554444443

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.36  E-value=4.5e-05  Score=79.14  Aligned_cols=160  Identities=10%  Similarity=-0.053  Sum_probs=97.2

Q ss_pred             CEEEEEEe-eCCCCEEEEEeCCC----cEEEEECCCC-eeEE-EEecCCCcEEEEEEcCCCCEEEEEeCC-----CeEEE
Q psy17682        217 RVGLVLWH-PTAQNVLLTAGSDN----NVAIWNVGTG-EIMI-QIECHPDIVYSASWNWDGSKLLTTCKD-----KKMRI  284 (490)
Q Consensus       217 ~v~~~~~~-p~~~~~l~s~~~dg----~v~iwd~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i  284 (490)
                      .+...+|+ |+|+.+.++...+|    .|+++|+.++ +.+. .+..   ....++|+|||+.|+....+     ..|++
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~  251 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWR  251 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence            67889999 99974444444443    4999999988 6321 1111   12468899999888877765     36888


Q ss_pred             EeCCCCcee--eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe--EEEeccCCCceeeeeecCCC
Q psy17682        285 INPRTGAIE--EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI--VMVELDTSNGVMFPLYDPDT  360 (490)
Q Consensus       285 wd~~~~~~~--~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~--~~~~~~~~~~i~~~~~s~~~  360 (490)
                      +++.++...  ..+..........+.|+|||++|+..........|.++|+.+.....  ............++.|+. |
T Consensus       252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g  330 (751)
T 2xe4_A          252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-T  330 (751)
T ss_dssp             EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-T
T ss_pred             EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-C
Confidence            999876532  22222222236678999999988776644456789999998753222  111111222334444433 6


Q ss_pred             CeEEEEecCC----CeEEEEEecC
Q psy17682        361 NLVYLCGKGD----SVIRYFEITA  380 (490)
Q Consensus       361 ~~l~~~g~~d----g~i~iwd~~~  380 (490)
                      +.|++....+    ..|..+++.+
T Consensus       331 ~~l~~~t~~~~a~~~~L~~~d~~~  354 (751)
T 2xe4_A          331 SHLVILTNEGGAVNHKLLIAPRGQ  354 (751)
T ss_dssp             TEEEEEECTTTCTTCEEEEEETTS
T ss_pred             CEEEEEeCCCCCCCcEEEEEcCCC
Confidence            6655665444    3566666654

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.35  E-value=0.00015  Score=69.82  Aligned_cols=202  Identities=11%  Similarity=0.098  Sum_probs=119.8

Q ss_pred             CEEEEEEeeC--CCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC---C-eEEEEeCCCC
Q psy17682        217 RVGLVLWHPT--AQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD---K-KMRIINPRTG  290 (490)
Q Consensus       217 ~v~~~~~~p~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g-~i~iwd~~~~  290 (490)
                      ....++|.|+  +. .|+.+...+.|+.+|+.+++.... .........++++++|+++++....   . .+...+...+
T Consensus       140 ~P~gvavd~~s~~g-~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~  217 (433)
T 4hw6_A          140 NIWRMMFDPNSNYD-DLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG  217 (433)
T ss_dssp             CCCEEEECTTTTTC-EEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred             CCceEEEccccCCC-EEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence            3568999985  33 455554448899999987765543 3345668999999999944444321   1 2333433222


Q ss_pred             cee-eeeeecCCCceeEEEEeC-CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEec
Q psy17682        291 AIE-EEAVCHEGSKATRAIYLK-SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK  368 (490)
Q Consensus       291 ~~~-~~~~~~~~~~~~~~~~s~-~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~  368 (490)
                      ... ..+. . ......++++| +|.++++-.   ..+.|+.+|..++.....+........-..++|+|+|+.||++-.
T Consensus       218 ~~~~~~~~-~-~~~P~giavd~~~G~lyv~d~---~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~  292 (433)
T 4hw6_A          218 FTERLSLC-N-ARGAKTCAVHPQNGKIYYTRY---HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN  292 (433)
T ss_dssp             TCCEEEEE-E-CSSBCCCEECTTTCCEEECBT---TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET
T ss_pred             eecccccc-c-cCCCCEEEEeCCCCeEEEEEC---CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC
Confidence            111 1121 1 22367788999 677766554   467899999875542112222222222346999999998888888


Q ss_pred             CCCeEEEEEecCCC-Cee---EEeeeeeC------------CCceeeEEE---------eeCceeEEeecceeEEEEecC
Q psy17682        369 GDSVIRYFEITAEP-PFV---HYINTFQT------------PDPQRGIGM---------MPKRGCDVNSCEIGRFFRLNN  423 (490)
Q Consensus       369 ~dg~i~iwd~~~~~-~~~---~~~~~~~~------------~~~i~~~~~---------sp~~~~l~~~~~~~~~~~~~~  423 (490)
                      ..+.|+.++..... .+.   ........            -....++++         .+++.+.++.....++..+..
T Consensus       293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~  372 (433)
T 4hw6_A          293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP  372 (433)
T ss_dssp             TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred             CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence            88999998876321 110   11111000            023567898         677777777666556666665


Q ss_pred             CC
Q psy17682        424 SG  425 (490)
Q Consensus       424 ~~  425 (490)
                      ..
T Consensus       373 ~G  374 (433)
T 4hw6_A          373 EG  374 (433)
T ss_dssp             TS
T ss_pred             CC
Confidence            44

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.34  E-value=0.00017  Score=72.02  Aligned_cols=234  Identities=11%  Similarity=-0.024  Sum_probs=137.5

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEE-EEEeeCCCCEEEEEeC------CCcEEEEECCCCeeE
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL-VLWHPTAQNVLLTAGS------DNNVAIWNVGTGEIM  251 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~p~~~~~l~s~~~------dg~v~iwd~~~~~~~  251 (490)
                      ..++.++.|+.+..+|..+++.+.........   ....+.+ ... .++  .++.++.      ++.|..+|.++|+.+
T Consensus       116 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~---~~~~~~~~P~v-~~g--~v~vg~~~~~~~~~g~v~a~D~~tG~~~  189 (571)
T 2ad6_A          116 GQIVKKQANGHLLALDAKTGKINWEVEVCDPK---VGSTLTQAPFV-AKD--TVLMGCSGAELGVRGAVNAFDLKTGELK  189 (571)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEECCCGG---GTCBCCSCCEE-ETT--EEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred             CEEEEEeCCCEEEEEECCCCCEEEEecCCCCC---ccceeccCCEE-ECC--EEEEEecCCccCCCCEEEEEECCCCcEE
Confidence            47788888999999999999887654321100   0001111 111 133  4555554      789999999999998


Q ss_pred             EEEecCCCc--------------------------------------EEEEEEcCCCCEEEEEeCC--------------
Q psy17682        252 IQIECHPDI--------------------------------------VYSASWNWDGSKLLTTCKD--------------  279 (490)
Q Consensus       252 ~~~~~~~~~--------------------------------------v~~~~~~~~~~~l~~~~~d--------------  279 (490)
                      .++......                                      ...+++.++...++.++.+              
T Consensus       190 W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~  269 (571)
T 2ad6_A          190 WRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNK  269 (571)
T ss_dssp             EEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCT
T ss_pred             EEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCce
Confidence            887632111                                      0135666766666666532              


Q ss_pred             --CeEEEEeCCCCceeeeeeecCC--------CceeEEEEeCCCc---EEEEEeCCCceeEEEEecCCCCCCCeEEEecc
Q psy17682        280 --KKMRIINPRTGAIEEEAVCHEG--------SKATRAIYLKSGL---IFTTGFSKMSERQYSLRAPDHLDEPIVMVELD  346 (490)
Q Consensus       280 --g~i~iwd~~~~~~~~~~~~~~~--------~~~~~~~~s~~~~---~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~  346 (490)
                        +.|..+|.++++.+..+.....        .....+....+|+   +++.++   .++.+++.|..+++.........
T Consensus       270 y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~---~~G~l~~lD~~tG~~~w~~~~~~  346 (571)
T 2ad6_A          270 WTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHID---RNGILYTLNRENGNLIVAEKVDP  346 (571)
T ss_dssp             TTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEEC---TTSEEEEEETTTCCEEEEEESST
T ss_pred             eEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeC---CCcEEEEEECCCCCEEeeecccC
Confidence              3699999999998887763210        1122222334674   566666   57899999998876432222111


Q ss_pred             -----------CCCce--------------------------eeeeecCCCCeEEEEec---------------------
Q psy17682        347 -----------TSNGV--------------------------MFPLYDPDTNLVYLCGK---------------------  368 (490)
Q Consensus       347 -----------~~~~i--------------------------~~~~~s~~~~~l~~~g~---------------------  368 (490)
                                 ....+                          ..++++|+...+|+...                     
T Consensus       347 ~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g  426 (571)
T 2ad6_A          347 AVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVG  426 (571)
T ss_dssp             TCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCC
T ss_pred             CccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccc
Confidence                       00011                          24678888888866431                     


Q ss_pred             ---------------CCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCC
Q psy17682        369 ---------------GDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSG  425 (490)
Q Consensus       369 ---------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~  425 (490)
                                     .+|.|..||+.+++.    +..+....++.+......+.++..+  ++.+..++..+++
T Consensus       427 ~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~----~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~  496 (571)
T 2ad6_A          427 ATLAMYPGPNGPTKKEMGQIRAFDLTTGKA----KWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGK  496 (571)
T ss_dssp             EEEEEEECTTSTTSCCCEEEEEECTTTCCE----EEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred             ccceeccCccccCCCCCCeEEEEECCCCCE----EEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCC
Confidence                           357899999999873    2333333344444444333333333  4567777777777

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.34  E-value=0.0012  Score=60.60  Aligned_cols=229  Identities=7%  Similarity=-0.059  Sum_probs=139.9

Q ss_pred             CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccc
Q psy17682        136 QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQ  215 (490)
Q Consensus       136 ~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  215 (490)
                      ...|+.+++...    .  . ....+......+.+++|++.++.++.+-...+.|..+++..+.....+      +...-
T Consensus        12 ~~~I~~i~l~~~----~--~-~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~------~~~~l   78 (318)
T 3sov_A           12 RRDLRLVDATNG----K--E-NATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV------VVSGL   78 (318)
T ss_dssp             EEEEEEEETTCT----T--S-CCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEE------EEECC
T ss_pred             cCeEEEEECCCC----c--e-EEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEE------EcCCC
Confidence            466777777521    1  0 111222223457789999866467777677789999998765321111      11122


Q ss_pred             cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCcee
Q psy17682        216 RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC--KDKKMRIINPRTGAIE  293 (490)
Q Consensus       216 ~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~  293 (490)
                      .....+++.+.+.+++++-...+.|.++++........+.........+++.|.+..|+.+.  ..+.|...++.... .
T Consensus        79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~  157 (318)
T 3sov_A           79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-R  157 (318)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-C
T ss_pred             CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-e
Confidence            34678899876655666666678999999865433333334456678999999766555555  25788888876433 2


Q ss_pred             eeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeE
Q psy17682        294 EEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVI  373 (490)
Q Consensus       294 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i  373 (490)
                      ..+....-.....+++++++..|..+..  ..+.|..+|++.... ..+.. ........+++.  +..+|.+-...+.|
T Consensus       158 ~~~~~~~l~~Pnglavd~~~~~lY~aD~--~~~~I~~~d~dG~~~-~~~~~-~~~~~P~glav~--~~~lywtd~~~~~V  231 (318)
T 3sov_A          158 FIIINSEIYWPNGLTLDYEEQKLYWADA--KLNFIHKSNLDGTNR-QAVVK-GSLPHPFALTLF--EDILYWTDWSTHSI  231 (318)
T ss_dssp             EEEECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSC-EEEEC-SCCSCEEEEEEE--TTEEEEEETTTTEE
T ss_pred             EEEEECCCCCccEEEEeccCCEEEEEEC--CCCEEEEEcCCCCce-EEEec-CCCCCceEEEEe--CCEEEEEecCCCeE
Confidence            3332222234789999997555544432  467899999875332 22222 223345566664  44666777778899


Q ss_pred             EEEEecCCCCe
Q psy17682        374 RYFEITAEPPF  384 (490)
Q Consensus       374 ~iwd~~~~~~~  384 (490)
                      ..++..+++..
T Consensus       232 ~~~~~~~G~~~  242 (318)
T 3sov_A          232 LACNKYTGEGL  242 (318)
T ss_dssp             EEEETTTCCSC
T ss_pred             EEEECCCCCce
Confidence            99999877643

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.28  E-value=2.2e-05  Score=80.19  Aligned_cols=247  Identities=11%  Similarity=0.074  Sum_probs=134.0

Q ss_pred             EEEECC-CCCCEEEEEeCCC-----------cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC-
Q psy17682        170 DIAWSP-HDDNVIASGSEDC-----------VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS-  236 (490)
Q Consensus       170 ~~~~~p-~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-  236 (490)
                      .+++.| ++ .+++.|+.+.           .+.+||..+++......    ....+.....++++.+++. +++.|+. 
T Consensus       190 ~~av~~~~g-~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~----~~~~~~~~~~~~~~~~~g~-lyv~GG~~  263 (656)
T 1k3i_A          190 AAAIEPTSG-RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTV----TVTKHDMFCPGISMDGNGQ-IVVTGGND  263 (656)
T ss_dssp             EEEEETTTT-EEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEE----EECSCCCSSCEEEECTTSC-EEEECSSS
T ss_pred             eEEEEecCC-EEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcc----cCCCCCCccccccCCCCCC-EEEeCCCC
Confidence            456666 55 7888887543           58899988776432211    0111333344577778885 8888884 


Q ss_pred             CCcEEEEECCCCeeEEEEecCC-CcEEEEEEcCCCCEEEEEe-CC-----CeEEEEeCCCCceeeee----eecCCCcee
Q psy17682        237 DNNVAIWNVGTGEIMIQIECHP-DIVYSASWNWDGSKLLTTC-KD-----KKMRIINPRTGAIEEEA----VCHEGSKAT  305 (490)
Q Consensus       237 dg~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~-~d-----g~i~iwd~~~~~~~~~~----~~~~~~~~~  305 (490)
                      +..+.+||..+.+-...-..+. ..-.+++..+++++++.|+ .+     ..+.+||..+.+-...-    ...... -.
T Consensus       264 ~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~-~~  342 (656)
T 1k3i_A          264 AKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTA-DK  342 (656)
T ss_dssp             TTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCC-CT
T ss_pred             CCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccc-cc
Confidence            4689999998765332211111 1123456667899999988 34     46999999876533210    000000 00


Q ss_pred             EEEEeCCCcEEEEEeCCC------ceeEEEEecCCCCCCCeEEEeccC-------CCceeeeeecCCCCeEEEEecCCC-
Q psy17682        306 RAIYLKSGLIFTTGFSKM------SERQYSLRAPDHLDEPIVMVELDT-------SNGVMFPLYDPDTNLVYLCGKGDS-  371 (490)
Q Consensus       306 ~~~~s~~~~~l~~~~~~~------~~~~i~iwd~~~~~~~~~~~~~~~-------~~~i~~~~~s~~~~~l~~~g~~dg-  371 (490)
                      ...+..++.+++.|+.++      ....+..||..+............       ...-..+.|...+..|++.|+.++ 
T Consensus       343 ~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~  422 (656)
T 1k3i_A          343 QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDY  422 (656)
T ss_dssp             TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSS
T ss_pred             cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCC
Confidence            011234455555554211      134678888876542111111100       112234445443445557777532 


Q ss_pred             ----------eEEEEEecCCCCeeEEee--eeeCCCceeeEEEeeCceeEEeec-------------ceeEEEEecCCC
Q psy17682        372 ----------VIRYFEITAEPPFVHYIN--TFQTPDPQRGIGMMPKRGCDVNSC-------------EIGRFFRLNNSG  425 (490)
Q Consensus       372 ----------~i~iwd~~~~~~~~~~~~--~~~~~~~i~~~~~sp~~~~l~~~~-------------~~~~~~~~~~~~  425 (490)
                                .|.+||..+.+ . ..+.  .......-.+.+..|++++++.++             ..+.+|+..++.
T Consensus       423 ~~~~~~~~~~~v~~yd~~~~~-W-~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~  499 (656)
T 1k3i_A          423 QDSDATTNAHIITLGEPGTSP-N-TVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT  499 (656)
T ss_dssp             SSSBCCCCEEEEECCSTTSCC-E-EEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred             CCCCcCCcceEEEcCCCCCCC-e-eEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence                      67788877664 1 1221  222222234556778998888775             245778877655

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=98.27  E-value=0.0012  Score=61.62  Aligned_cols=246  Identities=11%  Similarity=0.044  Sum_probs=134.1

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccc-cceeeecccccCEEEEEEeeC---CCCEEEEEeC---C-
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLT-EPVVDLLYHQRRVGLVLWHPT---AQNVLLTAGS---D-  237 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~~~---d-  237 (490)
                      .....|+|.|+| + |+.+..+|.|++++ .+++  ..+. .+  ...........++++|+   +..++++-..   + 
T Consensus        29 ~~P~~ia~~pdG-~-l~V~e~~g~I~~~d-~~G~--~~~~~~~--v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~  101 (354)
T 3a9g_A           29 EVPWSIAPLGGG-R-YLVTERPGRLVLIS-PSGK--KLVASFD--VANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGG  101 (354)
T ss_dssp             SCEEEEEEEETT-E-EEEEETTTEEEEEC-SSCE--EEEEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGG
T ss_pred             CCCeEEEEcCCC-e-EEEEeCCCEEEEEe-CCCc--eEeeccc--eeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCC
Confidence            457899999988 5 55556679999987 3443  1111 11  11112356899999997   4334444332   3 


Q ss_pred             ---CcEEEEECCCC-------eeE-EEEec-CCCcEEEEEEcCCCCEEEEEeC-------------CCeEEEEeCCCC--
Q psy17682        238 ---NNVAIWNVGTG-------EIM-IQIEC-HPDIVYSASWNWDGSKLLTTCK-------------DKKMRIINPRTG--  290 (490)
Q Consensus       238 ---g~v~iwd~~~~-------~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~--  290 (490)
                         ..|..|+....       +.+ ..+.. .......++|.|+|.++++.+.             .|.|.-++....  
T Consensus       102 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p  181 (354)
T 3a9g_A          102 HIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP  181 (354)
T ss_dssp             CEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC
T ss_pred             CcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC
Confidence               56777776543       111 11221 1123467999999987776432             256666665432  


Q ss_pred             ------ceeeeeeecCCCceeEEEEeC-CCcEEEEEeCCCceeEEEEecCCC--------C-------CCCeEEEec-cC
Q psy17682        291 ------AIEEEAVCHEGSKATRAIYLK-SGLIFTTGFSKMSERQYSLRAPDH--------L-------DEPIVMVEL-DT  347 (490)
Q Consensus       291 ------~~~~~~~~~~~~~~~~~~~s~-~~~~l~~~~~~~~~~~i~iwd~~~--------~-------~~~~~~~~~-~~  347 (490)
                            ....-..++..  ...++|+| +|.++++-........|.+.....        .       ..+.  ... ..
T Consensus       182 ~~npf~~~~i~a~G~rn--p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~--~~~~~~  257 (354)
T 3a9g_A          182 ADNPFPNSPIWSYGHRN--PQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPV--IDTGSE  257 (354)
T ss_dssp             TTSSSTTCCEEEECCSC--CCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCS--EECTTC
T ss_pred             CCCCCCCCcEEEEccCC--cceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCE--eecCCC
Confidence                  11111123333  67899999 687776643211112333322111        0       0111  111 22


Q ss_pred             CCceeeeeec-------CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCceeEEeecc-ee--
Q psy17682        348 SNGVMFPLYD-------PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGCDVNSCE-IG--  416 (490)
Q Consensus       348 ~~~i~~~~~s-------~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~-~~--  416 (490)
                      ......++|.       .+|+++ ++....+.|...++............+. ....+.++++.|||.+.++... ..  
T Consensus       258 ~~ap~G~~~y~g~~fp~~~G~l~-v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~~~~G~g  336 (354)
T 3a9g_A          258 TWAPSGASFVHGDMFPGLRGWLL-IACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTSNRDGRG  336 (354)
T ss_dssp             CCCEEEEEECCSSSCGGGTTEEE-EEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEECTTSSSS
T ss_pred             CcCCcceEEECCCCCcccCCcEE-EEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEeCCCCCc
Confidence            3456777773       456555 6666678888888875422221111111 1346899999999987776642 33  


Q ss_pred             -------EEEEecC
Q psy17682        417 -------RFFRLNN  423 (490)
Q Consensus       417 -------~~~~~~~  423 (490)
                             +||++..
T Consensus       337 ~~~~~~g~i~ri~~  350 (354)
T 3a9g_A          337 SLRAGDDKILKIVS  350 (354)
T ss_dssp             CCCTTCSCEEEEEE
T ss_pred             CCCCCCCEEEEEec
Confidence                   6777654

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=98.25  E-value=0.0057  Score=61.54  Aligned_cols=333  Identities=10%  Similarity=-0.039  Sum_probs=171.0

Q ss_pred             cccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEec
Q psy17682         40 LLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITIS  119 (490)
Q Consensus        40 l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  119 (490)
                      +...-+.+..++|++.++.++.+=-..+.|..+++......               ......    +   ......+++.
T Consensus        35 ~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~---------------~~v~~~----~---~~~P~GlAvD   92 (619)
T 3s94_A           35 VVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV---------------QNVVVS----G---LLSPDGLACD   92 (619)
T ss_dssp             -CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----C---------------EEEECS----S---CSCEEEEEEE
T ss_pred             EEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCce---------------EEEEeC----C---CCCcCeEEEE
Confidence            33445567899999977566666555678888887653200               000000    0   0124456665


Q ss_pred             cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCccee-ecccCCeeEEEECCCCCCEEEEEe-CCCcEEEEECCC
Q psy17682        120 EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALV-GGHKGPVLDIAWSPHDDNVIASGS-EDCVVKVWQIPD  197 (490)
Q Consensus       120 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~  197 (490)
                      +..    ..+.++-...+.|.+.++..      .   ...++ ...-.....|++.|.++.++++-. ..+.|...++..
T Consensus        93 ~~~----~~ly~~d~~~~~I~v~~~dG------~---~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG  159 (619)
T 3s94_A           93 WLG----EKLYWTDSETNRIEVSNLDG------S---LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG  159 (619)
T ss_dssp             TTT----TEEEEEETTTTEEEEEETTS------C---SCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred             ecC----CEEEEEeCCCCEEEEEECCC------C---CEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC
Confidence            532    12444556778888888752      1   11122 233456778999997645555542 245676666543


Q ss_pred             CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe
Q psy17682        198 GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC  277 (490)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  277 (490)
                      . ....+.      ...-.....+++.+++..++++=...+.|...|+..........+.......+++..+ ..+++-.
T Consensus       160 ~-~~~~l~------~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~  231 (619)
T 3s94_A          160 S-SRFIII------NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDW  231 (619)
T ss_dssp             C-SCEEEE------CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECT
T ss_pred             C-ceEEEE------eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecC
Confidence            2 222211      1123457899999987645555556678999998654332222212222346677654 4445545


Q ss_pred             CCCeEEEEeCCCCceeeeeeecCCC------------------------ceeEEEE-eC----------CC---------
Q psy17682        278 KDKKMRIINPRTGAIEEEAVCHEGS------------------------KATRAIY-LK----------SG---------  313 (490)
Q Consensus       278 ~dg~i~iwd~~~~~~~~~~~~~~~~------------------------~~~~~~~-s~----------~~---------  313 (490)
                      ..+.|...|..+++....+......                        ....+++ +|          .|         
T Consensus       232 ~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~  311 (619)
T 3s94_A          232 STHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKT  311 (619)
T ss_dssp             TTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSC
T ss_pred             CCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcc
Confidence            6678888888776543322110000                        0001111 11          11         


Q ss_pred             ------cEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEE
Q psy17682        314 ------LIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHY  387 (490)
Q Consensus       314 ------~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~  387 (490)
                            .+|+.+.    .+.|+..++.................+..++|++.+..||.+-...+.|+.+++..... ...
T Consensus       312 C~~~~~~~Ll~~~----~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~-~~v  386 (619)
T 3s94_A          312 CKDGATELLLLAR----RTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGS-QFV  386 (619)
T ss_dssp             BCSSCSEEEEEEE----SSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEE
T ss_pred             cCCCCceEEEEEc----ccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCcc-EEE
Confidence                  1222222    23445455554332212222223345778999998888878777788899888876431 112


Q ss_pred             eeeeeCCCceeeEEEee-CceeEEeecc--eeEEEEec
Q psy17682        388 INTFQTPDPQRGIGMMP-KRGCDVNSCE--IGRFFRLN  422 (490)
Q Consensus       388 ~~~~~~~~~i~~~~~sp-~~~~l~~~~~--~~~~~~~~  422 (490)
                      +.  ..-....++++.+ .+.+.++..+  .+.+.++.
T Consensus       387 ~~--~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~  422 (619)
T 3s94_A          387 VT--AQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLN  422 (619)
T ss_dssp             EC--SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             EE--CCCCCcCceEEecccCcEEEEeCCCCcEEEEeCC
Confidence            21  1123567899986 4455555433  34444443

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.22  E-value=0.001  Score=64.15  Aligned_cols=159  Identities=7%  Similarity=0.110  Sum_probs=102.8

Q ss_pred             CEEEEEEeeC-CCCEEEEEeCCCcEEEEECCCCeeEEEEecC---CCcEEEEEE-------cCCCCEEEEEeCCC-----
Q psy17682        217 RVGLVLWHPT-AQNVLLTAGSDNNVAIWNVGTGEIMIQIECH---PDIVYSASW-------NWDGSKLLTTCKDK-----  280 (490)
Q Consensus       217 ~v~~~~~~p~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~l~~~~~dg-----  280 (490)
                      ....|+|.|. +.+++++-...+.|++.|+.++.........   ......++|       +++++.|+++...+     
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~  219 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE  219 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence            4678999983 4445666555578999999877665544321   235889999       99999666665543     


Q ss_pred             --eEEEEeCCC-Ccee-----eeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCC-------CCCC-----C
Q psy17682        281 --KMRIINPRT-GAIE-----EEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPD-------HLDE-----P  339 (490)
Q Consensus       281 --~i~iwd~~~-~~~~-----~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~-------~~~~-----~  339 (490)
                        .+.+++... +...     ..+....  ....++.+|+ +.++++-.   ..+.|..+|+.       ++..     +
T Consensus       220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~--~p~giavdp~~g~LYvtd~---~~g~V~r~d~~~~~~~~~tg~~~tp~~~  294 (496)
T 3kya_A          220 SPSVYIIKRNADGTFDDRSDIQLIAAYK--QCNGATIHPINGELYFNSY---EKGQVFRLDLVDYFKTIKNGGSWDPIVK  294 (496)
T ss_dssp             EEEEEEEECCTTSCCSTTSCEEEEEEES--CCCCEEECTTTCCEEEEET---TTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred             CceEEEEecCCCCceeecccceeeccCC--CceEEEEcCCCCeEEEEEC---CCCEEEEEecccccccccCceeeccccc
Confidence              366776443 2221     2222212  2567788995 55565555   56789999987       4432     0


Q ss_pred             ------eEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        340 ------IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       340 ------~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                            ..+...........++|+|+|++||++-+..+.|+.++...
T Consensus       295 ~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg  341 (496)
T 3kya_A          295 NNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE  341 (496)
T ss_dssp             GCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred             ccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence                  12222333344678999999998878877888999977754

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.22  E-value=0.00043  Score=66.52  Aligned_cols=155  Identities=11%  Similarity=0.155  Sum_probs=101.0

Q ss_pred             CEEEEEEee-CCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC-CC----eEEEEeCCCC
Q psy17682        217 RVGLVLWHP-TAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK-DK----KMRIINPRTG  290 (490)
Q Consensus       217 ~v~~~~~~p-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg----~i~iwd~~~~  290 (490)
                      ....++++| ++. .|+.+...+.|+.+|+..++... +.........++++++++.|+++.. ++    .+..++. .+
T Consensus       138 ~P~~lavdp~~~g-~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g  214 (430)
T 3tc9_A          138 GAVWLSFDPKNHN-HLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES  214 (430)
T ss_dssp             CCCEEEEETTEEE-EEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred             CCCEEEECCCCCC-eEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence            457889997 343 45555444889999998766444 3335566889999999996666554 22    3444443 33


Q ss_pred             cee--eeeeecCCCceeEEEEeC-CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEe
Q psy17682        291 AIE--EEAVCHEGSKATRAIYLK-SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCG  367 (490)
Q Consensus       291 ~~~--~~~~~~~~~~~~~~~~s~-~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g  367 (490)
                      ...  ..+..  ......++++| +|.++++-.   ..+.|..++....... .+...........++|+|+|++|+++-
T Consensus       215 ~~~~~~~l~~--~~~p~giavdp~~g~lyv~d~---~~~~V~~~~~~~~~~~-~~~~~~~~~~P~gia~~pdG~~lyv~d  288 (430)
T 3tc9_A          215 GFKVITELTK--GQNCNGAETHPINGELYFNSW---NAGQVFRYDFTTQETT-PLFTIQDSGWEFHIQFHPSGNYAYIVV  288 (430)
T ss_dssp             TSCSEEEEEE--CSSCCCEEECTTTCCEEEEET---TTTEEEEEETTTTEEE-EEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred             ceeeeeeecc--CCCceEEEEeCCCCEEEEEEC---CCCEEEEEECCCCcEE-EEEEcCCCCcceeEEEcCCCCEEEEEE
Confidence            222  22322  12367788999 677776654   4678999998754321 222222223467899999999888888


Q ss_pred             cCCCeEEEEEecC
Q psy17682        368 KGDSVIRYFEITA  380 (490)
Q Consensus       368 ~~dg~i~iwd~~~  380 (490)
                      ...+.|..++...
T Consensus       289 ~~~~~I~~~~~d~  301 (430)
T 3tc9_A          289 VNQHYILRSDYDW  301 (430)
T ss_dssp             TTTTEEEEEEEET
T ss_pred             CCCCEEEEEeCCc
Confidence            8889999998874

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.21  E-value=0.00055  Score=61.87  Aligned_cols=160  Identities=10%  Similarity=0.057  Sum_probs=107.0

Q ss_pred             cccCEEEEEEeeCCCCEEEEEe-CCCcEEEEECCCCeeEEE-Eec----C--CCcEEEEEE---cCCCCEEEEEe-----
Q psy17682        214 HQRRVGLVLWHPTAQNVLLTAG-SDNNVAIWNVGTGEIMIQ-IEC----H--PDIVYSASW---NWDGSKLLTTC-----  277 (490)
Q Consensus       214 ~~~~v~~~~~~p~~~~~l~s~~-~dg~v~iwd~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~l~~~~-----  277 (490)
                      ......++.|++... .|..++ ..++|..||...+..... +..    .  ...+..+.|   .|+++++++..     
T Consensus        11 ~~~yPE~~~wd~~~g-~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af   89 (334)
T 2p9w_A           11 KNLTPEDTIYDRTRQ-VFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF   89 (334)
T ss_dssp             TTCCCSCEEEETTTT-EEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred             cccCCcCccCcCCCC-EEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence            444556889998765 455555 789999999975543333 221    1  114689999   68877777544     


Q ss_pred             --------CCCeEEEEeCC---CCceeeeeeec------------CCCceeEEEEeCCCcEEEEEeCCCce-eEEEEecC
Q psy17682        278 --------KDKKMRIINPR---TGAIEEEAVCH------------EGSKATRAIYLKSGLIFTTGFSKMSE-RQYSLRAP  333 (490)
Q Consensus       278 --------~dg~i~iwd~~---~~~~~~~~~~~------------~~~~~~~~~~s~~~~~l~~~~~~~~~-~~i~iwd~  333 (490)
                              .++.|..||+.   +++.+......            .......++..++|+..++++   .. +.|...+.
T Consensus        90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s---~~~~~I~rV~p  166 (334)
T 2p9w_A           90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFA---LGMPAIARVSA  166 (334)
T ss_dssp             CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEE---ESSCEEEEECT
T ss_pred             cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCC---CCCCeEEEEeC
Confidence                    26789999999   77766554311            111377899999999999887   44 56666666


Q ss_pred             CCCCCCeEEEec-----cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        334 DHLDEPIVMVEL-----DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       334 ~~~~~~~~~~~~-----~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      +..  .......     ....+.+.++++|+|+.|++..+ .|.+..+|+..
T Consensus       167 dG~--~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~  215 (334)
T 2p9w_A          167 DGK--TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSK  215 (334)
T ss_dssp             TSC--CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSS
T ss_pred             CCC--EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCC
Confidence            543  2221111     11234678999999999977666 99999999884

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.15  E-value=0.00048  Score=68.85  Aligned_cols=151  Identities=9%  Similarity=-0.057  Sum_probs=94.7

Q ss_pred             EEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEE-EEEeeCCCCEEEEEe------CCCcEEEEECCCCeeEE
Q psy17682        180 VIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGL-VLWHPTAQNVLLTAG------SDNNVAIWNVGTGEIMI  252 (490)
Q Consensus       180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~p~~~~~l~s~~------~dg~v~iwd~~~~~~~~  252 (490)
                      +++.++.|+.+..+|..+|+.+........  . ....+.+ ... .++  .+++++      .++.|+-+|.++|+.+.
T Consensus       123 rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~--~-~~~~~~ssP~v-~~g--~V~vg~~g~e~g~~g~v~A~D~~TG~~~W  196 (599)
T 1w6s_A          123 LILKTQLDGNVAALNAETGETVWKVENSDI--K-VGSTLTIAPYV-VKD--KVIIGSSGAELGVRGYLTAYDVKTGEQVW  196 (599)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEEECCCG--G-GTCBCCSCCEE-ETT--EEEECCBCGGGTCCCEEEEEETTTCCEEE
T ss_pred             EEEEEcCCCEEEEEECCCCCEEEeecCCCC--C-ccceeecCCEE-ECC--EEEEEecccccCCCCeEEEEECCCCcEEE
Confidence            377788899999999999987765432100  0 0001111 111 133  455554      37999999999999988


Q ss_pred             EEecCCCc-------------------------------------E-EEEEEcCCCCEEEEEeCC---------------
Q psy17682        253 QIECHPDI-------------------------------------V-YSASWNWDGSKLLTTCKD---------------  279 (490)
Q Consensus       253 ~~~~~~~~-------------------------------------v-~~~~~~~~~~~l~~~~~d---------------  279 (490)
                      ++......                                     + ..+++.++...++.++.+               
T Consensus       197 ~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y  276 (599)
T 1w6s_A          197 RAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKW  276 (599)
T ss_dssp             EEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred             EEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccc
Confidence            87632211                                     0 134566777777777655               


Q ss_pred             -CeEEEEeCCCCceeeeeeecCCC--------ceeEEEEe-CCC---cEEEEEeCCCceeEEEEecCCCCCCC
Q psy17682        280 -KKMRIINPRTGAIEEEAVCHEGS--------KATRAIYL-KSG---LIFTTGFSKMSERQYSLRAPDHLDEP  339 (490)
Q Consensus       280 -g~i~iwd~~~~~~~~~~~~~~~~--------~~~~~~~s-~~~---~~l~~~~~~~~~~~i~iwd~~~~~~~  339 (490)
                       +.|..+|..+++.+..+......        ....+... .+|   ..++.++   .++.+.+.|.++++..
T Consensus       277 ~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~---~~G~l~~lD~~tG~~l  346 (599)
T 1w6s_A          277 TMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPD---RNGIVYTLDRTDGALV  346 (599)
T ss_dssp             SSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEEC---TTSEEEEEETTTCCEE
T ss_pred             cceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEEC---CCcEEEEEECCCCCEe
Confidence             38999999999998877632210        11222222 567   5666666   6889999999887643

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.11  E-value=0.0057  Score=63.12  Aligned_cols=222  Identities=9%  Similarity=0.015  Sum_probs=132.3

Q ss_pred             CCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC----eeEEEEecCCCcE
Q psy17682        186 EDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG----EIMIQIECHPDIV  261 (490)
Q Consensus       186 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~~~~~v  261 (490)
                      ....|+..++........        ......+..++|.+.+..++++-...+.|+.+++...    .....+.......
T Consensus       402 n~~~Ir~i~l~~~~~~~l--------~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P  473 (791)
T 3m0c_C          402 NRHEVRKMTLDRSEYTSL--------IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP  473 (791)
T ss_dssp             CBSSEEEECTTSCCCEEE--------ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred             cccceeEeeccCCcceee--------ecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence            345688888765543221        1234567899999866546666666788999998652    2223333234556


Q ss_pred             EEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCC
Q psy17682        262 YSASWNWDGS-KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEP  339 (490)
Q Consensus       262 ~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~  339 (490)
                      ..|++.+.++ ++++-...+.|.+.++..... ..+..........+++.|. |.++++-.  +..+.|...++..... 
T Consensus       474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~-~~l~~~~l~~P~gIaVDp~~g~LYwtD~--g~~~~I~~~~~dG~~~-  549 (791)
T 3m0c_C          474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTDW--GTPAKIKKGGLNGVDI-  549 (791)
T ss_dssp             CEEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEEECTTCCEEEEEEETTTTEEEEEEC--SSSCEEEEEETTSCCE-
T ss_pred             ceeeeeecCCcEEEEecCCCeEEEEeCCCCeE-EEEEeCCCCCcceEEEecCCCCEEEecC--CCCCeEEEEecCCCce-
Confidence            7899988765 555555678999999885543 3333333334889999997 55555432  1236788888875332 


Q ss_pred             eEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEE
Q psy17682        340 IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFF  419 (490)
Q Consensus       340 ~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~  419 (490)
                      ..+.. ........|++++.+..||++-...+.|..+++.... ....+.....-....+|++..+ .+.++.....+|+
T Consensus       550 ~~lv~-~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~-~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~~I~  626 (791)
T 3m0c_C          550 YSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIF  626 (791)
T ss_dssp             EEEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEETT-EEEEEETTTTEEE
T ss_pred             EEEEe-CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc-eEEEecCCCccCCCCEEEEeCC-EEEEEECCCCEEE
Confidence            22221 2234578899999888888887777889999986554 2222211111123456666544 4445544444555


Q ss_pred             Eec
Q psy17682        420 RLN  422 (490)
Q Consensus       420 ~~~  422 (490)
                      .+.
T Consensus       627 ~~d  629 (791)
T 3m0c_C          627 SAN  629 (791)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            553

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.09  E-value=0.0021  Score=64.21  Aligned_cols=154  Identities=12%  Similarity=0.046  Sum_probs=93.5

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceee--ecccccCEEEEEEee--CCCCEEEEEe------CCCcEEEEECCCC
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVD--LLYHQRRVGLVLWHP--TAQNVLLTAG------SDNNVAIWNVGTG  248 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~p--~~~~~l~s~~------~dg~v~iwd~~~~  248 (490)
                      ..++.++.|+.|..+|.++|+.+.........  ......++.   ...  +++..+++++      .++.|.-+|..+|
T Consensus       118 ~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v---~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG  194 (582)
T 1flg_A          118 DKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTI---VKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTG  194 (582)
T ss_dssp             TEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEE---EECTTTCCEEEEECCBCGGGCCBCEEEEECTTTC
T ss_pred             CEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEE---eCCCcCCcEEEEEeccccccCCCCEEEEEECCCC
Confidence            46778888999999999999887654321100  000111111   111  1221455554      3789999999999


Q ss_pred             eeEEEEecCCCcE-----------------------------------------EEEEEcCCCCEEEEEeC---------
Q psy17682        249 EIMIQIECHPDIV-----------------------------------------YSASWNWDGSKLLTTCK---------  278 (490)
Q Consensus       249 ~~~~~~~~~~~~v-----------------------------------------~~~~~~~~~~~l~~~~~---------  278 (490)
                      +.+.........+                                         ..+++.|+...++.++.         
T Consensus       195 ~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~  274 (582)
T 1flg_A          195 EEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWA  274 (582)
T ss_dssp             CEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGG
T ss_pred             CEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcc
Confidence            9887664311100                                         13456666677776663         


Q ss_pred             -----------C----CeEEEEeCCCCceeeeeee--cCC------CceeEEEEe-CCCc---EEEEEeCCCceeEEEEe
Q psy17682        279 -----------D----KKMRIINPRTGAIEEEAVC--HEG------SKATRAIYL-KSGL---IFTTGFSKMSERQYSLR  331 (490)
Q Consensus       279 -----------d----g~i~iwd~~~~~~~~~~~~--~~~------~~~~~~~~s-~~~~---~l~~~~~~~~~~~i~iw  331 (490)
                                 |    +.|..+|..+++.+..+..  |..      .....+... .+|+   .++.++   .++.++++
T Consensus       275 r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~---~~G~l~~l  351 (582)
T 1flg_A          275 RTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHAD---RNGFFYVV  351 (582)
T ss_dssp             GSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEEC---TTSEEEEE
T ss_pred             cccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEEC---CCceEEEE
Confidence                       2    5899999999999888763  210      011112222 4673   666676   68899999


Q ss_pred             cCCCCCC
Q psy17682        332 APDHLDE  338 (490)
Q Consensus       332 d~~~~~~  338 (490)
                      |..+++.
T Consensus       352 D~~tG~~  358 (582)
T 1flg_A          352 DRSNGKL  358 (582)
T ss_dssp             ETTTCCE
T ss_pred             ECCCCCE
Confidence            9988764

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.08  E-value=0.0023  Score=58.57  Aligned_cols=229  Identities=7%  Similarity=-0.025  Sum_probs=135.3

Q ss_pred             CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee-EEEEecCCCcEEEEE
Q psy17682        187 DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI-MIQIECHPDIVYSAS  265 (490)
Q Consensus       187 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~-~~~~~~~~~~v~~~~  265 (490)
                      ...|+..++........+  +   +. .......+.|.+.+..++.+-...+.|..+++..+.. ...+.........++
T Consensus        12 ~~~I~~i~l~~~~~~~~~--~---~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gla   85 (318)
T 3sov_A           12 RRDLRLVDATNGKENATI--V---VG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLA   85 (318)
T ss_dssp             EEEEEEEETTCTTSCCEE--E---EE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEE
T ss_pred             cCeEEEEECCCCceEEEE--E---ec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEE
Confidence            467999998765321111  1   11 2235678999987654666666678899999876532 122222334566889


Q ss_pred             EcCCC-CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeEEE
Q psy17682        266 WNWDG-SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIVMV  343 (490)
Q Consensus       266 ~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~  343 (490)
                      +.+.+ +++++-...+.|.++++..... ..+..........+++.|. |.++.+-.  +..+.|...+++.... ..+.
T Consensus        86 vd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~~~~P~giavdp~~g~ly~td~--~~~~~I~r~~~dG~~~-~~~~  161 (318)
T 3sov_A           86 CDWLGEKLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPRAIALDPSSGFMYWTDW--GEVPKIERAGMDGSSR-FIII  161 (318)
T ss_dssp             EETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEEGGGTEEEEEEC--SSSCEEEEEETTSCSC-EEEE
T ss_pred             EEcCCCeEEEEECCCCEEEEEECCCCcE-EEEEeCCCCCccEEEEeCCCCEEEEEec--CCCCEEEEEEcCCCCe-EEEE
Confidence            98744 5555555678999999875433 3332222234789999986 44444432  1256788888774332 2222


Q ss_pred             eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecc--eeEEEEe
Q psy17682        344 ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCE--IGRFFRL  421 (490)
Q Consensus       344 ~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--~~~~~~~  421 (490)
                      . ........++++|++..||++-+..+.|..+++.... . +.+.. .......++++..+ .+.++.-.  .+..++.
T Consensus       162 ~-~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-~-~~~~~-~~~~~P~glav~~~-~lywtd~~~~~V~~~~~  236 (318)
T 3sov_A          162 N-SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-R-QAVVK-GSLPHPFALTLFED-ILYWTDWSTHSILACNK  236 (318)
T ss_dssp             C-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-C-EEEEC-SCCSCEEEEEEETT-EEEEEETTTTEEEEEET
T ss_pred             E-CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-e-EEEec-CCCCCceEEEEeCC-EEEEEecCCCeEEEEEC
Confidence            1 2234468899999988988888888999999987543 1 12211 12234567777654 44444433  4444444


Q ss_pred             cCCCceEEE
Q psy17682        422 NNSGLCQVV  430 (490)
Q Consensus       422 ~~~~~~~~i  430 (490)
                      .+++..+.+
T Consensus       237 ~~G~~~~~i  245 (318)
T 3sov_A          237 YTGEGLREI  245 (318)
T ss_dssp             TTCCSCEEE
T ss_pred             CCCCceEEE
Confidence            445534444

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.07  E-value=0.0067  Score=55.81  Aligned_cols=193  Identities=10%  Similarity=0.033  Sum_probs=105.0

Q ss_pred             ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECC-CCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEE
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP-DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAI  242 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~i  242 (490)
                      +.+.+..+.+.+++ ..++.+ .+|.|  |... .++.-....      ......+..+.+.+++. +++.+ .+|.+..
T Consensus       120 ~~~~~~~i~~~~~~-~~~~~~-~~g~v--~~S~DgG~tW~~~~------~~~~~~~~~~~~~~~~~-~~~~g-~~G~~~~  187 (327)
T 2xbg_A          120 LPGSPRLIKALGNG-SAEMIT-NVGAI--YRTKDSGKNWQALV------QEAIGVMRNLNRSPSGE-YVAVS-SRGSFYS  187 (327)
T ss_dssp             CSSCEEEEEEEETT-EEEEEE-TTCCE--EEESSTTSSEEEEE------CSCCCCEEEEEECTTSC-EEEEE-TTSSEEE
T ss_pred             CCCCeEEEEEECCC-CEEEEe-CCccE--EEEcCCCCCCEEee------cCCCcceEEEEEcCCCc-EEEEE-CCCcEEE
Confidence            34557788877655 555544 56654  3333 343322221      12445788999999874 66555 4455443


Q ss_pred             -EEC--CCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeec---CCCceeEEEEeCCCcEE
Q psy17682        243 -WNV--GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCH---EGSKATRAIYLKSGLIF  316 (490)
Q Consensus       243 -wd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~l  316 (490)
                       .|-  .+-+.+.  ......+..+.+.++++.++ ++.+|.+++.+...++.-..+...   ....+..+.+.+++.++
T Consensus       188 S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~  264 (327)
T 2xbg_A          188 TWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVW  264 (327)
T ss_dssp             EECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEE
T ss_pred             EeCCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEE
Confidence             342  2222321  23456788999999887554 556788877643323322222211   11237888899888888


Q ss_pred             EEEeCCCceeEEEEecCCCCCCCeEEEec-cCCCceeeeeecCCCCeEEEEecCCCeEEEEEe
Q psy17682        317 TTGFSKMSERQYSLRAPDHLDEPIVMVEL-DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEI  378 (490)
Q Consensus       317 ~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~  378 (490)
                      +++.    ++.+ .+..+.+..-...... .....+..+.|.++++.+ + ++.+|.|.-++-
T Consensus       265 ~~g~----~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~-~-~G~~G~i~~~~~  320 (327)
T 2xbg_A          265 LAGG----AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGF-I-LGQKGILLRYVT  320 (327)
T ss_dssp             EEES----TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEE-E-ECSTTEEEEECC
T ss_pred             EEeC----CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceE-E-EcCCceEEEEcC
Confidence            8875    4545 2333333322111111 123457788887655533 4 456887766553

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.05  E-value=2.9e-05  Score=79.46  Aligned_cols=204  Identities=7%  Similarity=-0.162  Sum_probs=118.5

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCC----CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEE
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPD----GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVA  241 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~  241 (490)
                      ..+.+++|++.++.++++-...+.|+.+++..    ......+       .........|++.+.+.+++++-...+.|.
T Consensus       406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i-------~~~~~~P~glavD~~~g~LY~tD~~~~~I~  478 (699)
T 1n7d_A          406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-------SRDIQAPDGLAVDWIHSNIYWTDSVLGTVS  478 (699)
T ss_dssp             TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC-------CSCC--CCCEECCCSSSBCEECCTTTSCEE
T ss_pred             cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE-------eCCCCCcceEEEEeeCCcEEEEeccCCeEE
Confidence            45678899987645555555668899999865    1111111       111123456788765555666656678899


Q ss_pred             EEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe-CC-CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682        242 IWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KD-KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG  319 (490)
Q Consensus       242 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~  319 (490)
                      ++++........+.........++++|.+.+|+.+. .. +.|..+++.... ...+....-.....++++|++..|..+
T Consensus       479 v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~PnGlavd~~~~~LY~a  557 (699)
T 1n7d_A          479 VADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWV  557 (699)
T ss_dssp             EEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSCCCEEECTTTCCEEEE
T ss_pred             EEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCccEEEEeccCCEEEEE
Confidence            999875543333332334567889999655444443 22 678887775432 222221222236789999875544443


Q ss_pred             eCCCceeEEEEecCCCCCCCeEEEec-cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        320 FSKMSERQYSLRAPDHLDEPIVMVEL-DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       320 ~~~~~~~~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      ..  ..+.|..+++.... ...+... ........+++.  +..||++-...+.|..++..+++
T Consensus       558 D~--~~~~I~~~d~dG~~-~~~~~~~~~~~~~P~glavd--~~~lywtd~~~~~V~~~d~~~G~  616 (699)
T 1n7d_A          558 DS--KLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGS  616 (699)
T ss_dssp             ET--TTTEEEEECSSSSC-CEEECCCSSSCSSCCCCEEE--TTEEEEECSTTTCEEEEETTTEE
T ss_pred             ec--CCCeEEEEccCCCc-eEEEEecCCcCCCceEeEEE--CCEEEEEeCCCCeEEEEEccCCC
Confidence            32  46789999987533 2222221 111223445554  34676777777899999887765

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.04  E-value=0.001  Score=60.14  Aligned_cols=212  Identities=7%  Similarity=-0.040  Sum_probs=128.7

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecc-cccCEEEEEE---eeCCCCEEEEEe---
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLY-HQRRVGLVLW---HPTAQNVLLTAG---  235 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~---~p~~~~~l~s~~---  235 (490)
                      ...---.+++|++..+.++++.-..++|..|+...+..... ..+.....+ ....+..+.|   .|++. ++++..   
T Consensus        10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~   87 (334)
T 2p9w_A           10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAK   87 (334)
T ss_dssp             CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETT
T ss_pred             CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCc-EEEEEcccc
Confidence            34445568899886645555555789999999865543222 111000001 1124589999   58864 666443   


Q ss_pred             ----------CCCcEEEEECC---CCeeEEEEe--c-----------CCCcEEEEEEcCCCCEEEEEeCC-CeEEEEeCC
Q psy17682        236 ----------SDNNVAIWNVG---TGEIMIQIE--C-----------HPDIVYSASWNWDGSKLLTTCKD-KKMRIINPR  288 (490)
Q Consensus       236 ----------~dg~v~iwd~~---~~~~~~~~~--~-----------~~~~v~~~~~~~~~~~l~~~~~d-g~i~iwd~~  288 (490)
                                .+..|..+|+.   +++.+....  .           .......++..++|+..++++.. +.|..++..
T Consensus        88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd  167 (334)
T 2p9w_A           88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD  167 (334)
T ss_dssp             TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred             cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence                      15779999998   787766554  1           12358899999999999999988 888888876


Q ss_pred             CCceeeeee-e----cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC-CeEEEecc---CCCceee-eeecC
Q psy17682        289 TGAIEEEAV-C----HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE-PIVMVELD---TSNGVMF-PLYDP  358 (490)
Q Consensus       289 ~~~~~~~~~-~----~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~-~~~~~~~~---~~~~i~~-~~~s~  358 (490)
                      ... +..+. .    ....-.+.++++|+|+.|++..   ..+.+..+|+..... +......+   ....... +.--.
T Consensus       168 G~~-~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~---~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~  243 (334)
T 2p9w_A          168 GKT-VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFG---GPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPV  243 (334)
T ss_dssp             SCC-EEEEEECCCCSSSCCSCSEEEEETTTTEEEEES---SSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEE
T ss_pred             CCE-EeeeeecCCCcccccCcceEEEeCCCCEEEEEc---CCCeEEEEcCCCCcceeecccccCCcccccCccccccccc
Confidence            442 23222 1    1112267999999999888876   477888889884322 01111001   1112233 23334


Q ss_pred             CCCeEEEEecCCCeEEEEEecC
Q psy17682        359 DTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       359 ~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      +|+.|+++....+.+.+.+...
T Consensus       244 ~G~vllV~~~~~~~~~l~S~Dg  265 (334)
T 2p9w_A          244 GNESVLVGARAPYAISFRSWDN  265 (334)
T ss_dssp             TTEEEEEEEETTEEEEEECSST
T ss_pred             CCEEEEEEcCCCCEEEEECCCC
Confidence            7777667766666655555444

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.02  E-value=0.0016  Score=62.94  Aligned_cols=243  Identities=11%  Similarity=0.042  Sum_probs=133.1

Q ss_pred             CeeEEEECCC-CCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEE-------eeCCCCEEEEEeCCC
Q psy17682        167 PVLDIAWSPH-DDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLW-------HPTAQNVLLTAGSDN  238 (490)
Q Consensus       167 ~V~~~~~~p~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~p~~~~~l~s~~~dg  238 (490)
                      ....|+|+|. +++++++....+.|++.|++++........    -.........++|       ++++. .|+++...+
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~----~~~~~~~p~~ia~~~~~~~~d~~G~-~lyvad~~~  214 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNI----NTIPTNRIRSIAFNKKIEGYADEAE-YMIVAIDYD  214 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECC----TTSSCSBEEEEEECCCBTTTBCTTC-EEEEEECCC
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEcc----CccccCCCcEEEEeecccccCCCCC-EEEEEeCCC
Confidence            5778999994 435555555557788899877655332211    0112235899999       99986 455554433


Q ss_pred             -------cEEEEECCC-CeeE-----EEEecCCCcEEEEEEcCC-CCEEEEEeCCCeEEEEeCC-------CCce-----
Q psy17682        239 -------NVAIWNVGT-GEIM-----IQIECHPDIVYSASWNWD-GSKLLTTCKDKKMRIINPR-------TGAI-----  292 (490)
Q Consensus       239 -------~v~iwd~~~-~~~~-----~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~-------~~~~-----  292 (490)
                             .|.+++... ++..     ..+... .....++++|+ +.++++-..++.|+.+|+.       ++..     
T Consensus       215 ~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~  293 (496)
T 3kya_A          215 GKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIV  293 (496)
T ss_dssp             TTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBG
T ss_pred             CCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccc
Confidence                   266665433 2221     222211 23457888994 5556666678889999987       5543     


Q ss_pred             ------eee-eeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC----CeEEEec-cCC------------
Q psy17682        293 ------EEE-AVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE----PIVMVEL-DTS------------  348 (490)
Q Consensus       293 ------~~~-~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~----~~~~~~~-~~~------------  348 (490)
                            ... +..........++|+|+|..|..+..  ..+.|+.++......    +..+... ...            
T Consensus       294 ~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~--~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f  371 (496)
T 3kya_A          294 KNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVI--NNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARM  371 (496)
T ss_dssp             GGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEET--TTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBC
T ss_pred             cccccccceeEecCCCCCceEEEEcCCCCEEEEEeC--CCCEEEEEecCCCcceecccEEecCCCCCCcccCCccccccc
Confidence                  112 22222334689999999995444432  466788765543221    1122211 000            


Q ss_pred             Ccee-eeeec-------CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee------------e--CC--------Ccee
Q psy17682        349 NGVM-FPLYD-------PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF------------Q--TP--------DPQR  398 (490)
Q Consensus       349 ~~i~-~~~~s-------~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~------------~--~~--------~~i~  398 (490)
                      .... .++..       ++| .|+++-...+.|+.++ .++. +. .+...            .  .+        ....
T Consensus       372 ~~P~~gv~vd~~~~~~~~~g-~lyVaD~~N~rIr~i~-~~G~-v~-TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~  447 (496)
T 3kya_A          372 NNPCQGVFVKNPDYTGEEEY-DFYFVDRLNFCVRKVT-PEGI-VS-TYAGRGASTSLADGNQWGTDDGDLREVARFRDVS  447 (496)
T ss_dssp             SSEEEEEEEECTTCCSSCCE-EEEEEEGGGTEEEEEC-TTCB-EE-EEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEE
T ss_pred             CCCeEEEEEccccccccCCC-eEEEEECCCCEEEEEe-CCCC-EE-EEecccccccccCccccccCCCCchhhhhcCCCc
Confidence            1122 33443       344 4556777788999988 4442 22 22211            0  00        2356


Q ss_pred             eEEEeeC-ceeEEeecceeEEEEe
Q psy17682        399 GIGMMPK-RGCDVNSCEIGRFFRL  421 (490)
Q Consensus       399 ~~~~sp~-~~~l~~~~~~~~~~~~  421 (490)
                      +|+++++ +.+.++-...-||.++
T Consensus       448 gIavd~~~g~lyVaD~~N~rIrki  471 (496)
T 3kya_A          448 GLVYDDVKEMFYVHDQVGHTIRTI  471 (496)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEE
T ss_pred             EEEEECCCCEEEEEeCCCCEEEEE
Confidence            7888886 7776766554344443

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.99  E-value=0.0023  Score=59.11  Aligned_cols=206  Identities=11%  Similarity=-0.047  Sum_probs=113.8

Q ss_pred             CCeeEEEECCCCCCEEEEE------------eCCCcEEEEECCCCC-cccccccceeeecccccCEEEEEEeeC--CCCE
Q psy17682        166 GPVLDIAWSPHDDNVIASG------------SEDCVVKVWQIPDGG-ISRTLTEPVVDLLYHQRRVGLVLWHPT--AQNV  230 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~------------~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~  230 (490)
                      .....+...|+| ..++++            ..+|.|.++|..+.. ....+......+....-....+.+.++  +...
T Consensus        50 ~G~EDi~~~~~G-~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~  128 (355)
T 3sre_A           50 NGSEDLEILPNG-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVY  128 (355)
T ss_dssp             SCCCEEEECTTS-EEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred             CCcceeEEcCCC-eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEE
Confidence            345677788876 444443            168999999987432 112221000001112346778888773  4324


Q ss_pred             EEEE-eC--CCcEEEEECCCC--e--eEEEEec-CCCcEEEEEEcCCCCEEEEEe-----------------CCCeEEEE
Q psy17682        231 LLTA-GS--DNNVAIWNVGTG--E--IMIQIEC-HPDIVYSASWNWDGSKLLTTC-----------------KDKKMRII  285 (490)
Q Consensus       231 l~s~-~~--dg~v~iwd~~~~--~--~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-----------------~dg~i~iw  285 (490)
                      |+++ ..  +..|.+|++..+  .  .+..+.+ .-...+.+++.++|+++++..                 ..|.|+-+
T Consensus       129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~  208 (355)
T 3sre_A          129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY  208 (355)
T ss_dssp             EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred             EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence            4444 22  467788776543  2  2333332 234578999999998877754                 12556666


Q ss_pred             eCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecC-CCCeEE
Q psy17682        286 NPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDP-DTNLVY  364 (490)
Q Consensus       286 d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~  364 (490)
                      |..  +.......-  .....++|+||++.|..+..  ..+.|..|++...........+......-.+++++ +|++.+
T Consensus       209 d~~--~~~~~~~~l--~~pNGia~spDg~~lYvadt--~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwv  282 (355)
T 3sre_A          209 SPN--DVRVVAEGF--DFANGINISPDGKYVYIAEL--LAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWV  282 (355)
T ss_dssp             CTT--CCEEEEEEE--SSEEEEEECTTSSEEEEEEG--GGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEE
T ss_pred             ECC--eEEEeecCC--cccCcceECCCCCEEEEEeC--CCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEE
Confidence            653  322222222  23789999999987766542  46789999987433222222222334567788888 588763


Q ss_pred             EEecCCCeEEEEEe
Q psy17682        365 LCGKGDSVIRYFEI  378 (490)
Q Consensus       365 ~~g~~dg~i~iwd~  378 (490)
                      ++.-..+.|..|+-
T Consensus       283 a~~~~g~~v~~~~P  296 (355)
T 3sre_A          283 GCHPNGMRIFFYDA  296 (355)
T ss_dssp             EEESCHHHHHSCCT
T ss_pred             EecCCceEEEEECC
Confidence            33322234444443

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=97.98  E-value=0.0025  Score=58.13  Aligned_cols=186  Identities=10%  Similarity=0.119  Sum_probs=115.7

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC----CCC--EEEEEe-C--CCcEEEEECC--C
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT----AQN--VLLTAG-S--DNNVAIWNVG--T  247 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~----~~~--~l~s~~-~--dg~v~iwd~~--~  247 (490)
                      .+++.....+-+.+||+ +++.+..+.         .+.+..+..-|.    ++.  ++++.. .  +++|++|++.  +
T Consensus        41 s~ii~t~k~~gL~Vydl-~G~~l~~~~---------~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~  110 (355)
T 3amr_A           41 SKLITTNKKSGLVVYSL-DGKMLHSYN---------TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN  110 (355)
T ss_dssp             CEEEEEETTTEEEEEET-TSCEEEEEC---------CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT
T ss_pred             cEEEEEcCCCCEEEEcC-CCcEEEEcc---------CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC
Confidence            56777777889999999 777766542         245666666552    211  223333 3  5789999773  3


Q ss_pred             CeeEEEEec------CC-CcEEEEEE--cCC-CC-EEEEEeCCCeEEEEeCC---C----CceeeeeeecCCCceeEEEE
Q psy17682        248 GEIMIQIEC------HP-DIVYSASW--NWD-GS-KLLTTCKDKKMRIINPR---T----GAIEEEAVCHEGSKATRAIY  309 (490)
Q Consensus       248 ~~~~~~~~~------~~-~~v~~~~~--~~~-~~-~l~~~~~dg~i~iwd~~---~----~~~~~~~~~~~~~~~~~~~~  309 (490)
                      ++ +..+..      .. ..+..+++  +|. ++ ++++...+|.+..|++.   .    .+.++++....  .+-.+..
T Consensus       111 ~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs--q~Egcvv  187 (355)
T 3amr_A          111 GT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS--QTEGMAA  187 (355)
T ss_dssp             CC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS--CEEEEEE
T ss_pred             Cc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC--CcceEEE
Confidence            33 444421      11 45677887  774 44 67788889999999883   2    34556665433  4788888


Q ss_pred             eCCCcEEEEEeCCCceeEEEEecCCCCC--CCeEEEeccCC---Cceeeeee--cCCCC-eEEEEecCCCeEEEEEecC
Q psy17682        310 LKSGLIFTTGFSKMSERQYSLRAPDHLD--EPIVMVELDTS---NGVMFPLY--DPDTN-LVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       310 s~~~~~l~~~~~~~~~~~i~iwd~~~~~--~~~~~~~~~~~---~~i~~~~~--s~~~~-~l~~~g~~dg~i~iwd~~~  380 (490)
                      .+....|..+-   .+..|..++.+...  ....+......   ..+..+++  .++++ +|++++-.+....+||...
T Consensus       188 Dd~~g~Lyv~e---Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~  263 (355)
T 3amr_A          188 DDEYGRLYIAE---EDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG  263 (355)
T ss_dssp             ETTTTEEEEEE---TTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred             cCCCCeEEEec---ccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence            88877777776   34446666644222  22233333221   24666666  56666 7877776788999999973

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=97.89  E-value=0.018  Score=57.91  Aligned_cols=225  Identities=9%  Similarity=0.034  Sum_probs=138.3

Q ss_pred             EEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCC
Q psy17682        180 VIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPD  259 (490)
Q Consensus       180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~  259 (490)
                      +|+-+ ....|+..++.+......+.     +. .-..+..++|++.+..++++-..++.|..+++........+.....
T Consensus         8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~-----~~-~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~   80 (628)
T 4a0p_A            8 FLLFS-RRADIRRISLETNNNNVAIP-----LT-GVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLD   80 (628)
T ss_dssp             EEEEE-ETTEEEEEESSCTTCEEECC-----CC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred             EEEEE-eCCcEEEEECCCCCcceEEE-----cC-CCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCC
Confidence            34433 45689999987654322211     11 2346789999998765666666678999999875443333332234


Q ss_pred             cEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCC
Q psy17682        260 IVYSASWNWDGS-KLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLD  337 (490)
Q Consensus       260 ~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~  337 (490)
                      ....+++.+.+. ++++-...+.|.+.++..... ..+....-.....+++.|. |.++.+-.  +..+.|...+++...
T Consensus        81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~iavdp~~G~lY~tD~--g~~~~I~r~~~dG~~  157 (628)
T 4a0p_A           81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-QVLVWKDLDSPRALALDPAEGFMYWTEW--GGKPKIDRAAMDGSE  157 (628)
T ss_dssp             CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC-EEEECSSCCCEEEEEEETTTTEEEEEEC--SSSCEEEEEETTSCS
T ss_pred             CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-EEEEeCCCCCcccEEEccCCCeEEEeCC--CCCCEEEEEeCCCCc
Confidence            567899987655 445555678899999875443 2332222234789999985 65555432  135678888877544


Q ss_pred             CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeE
Q psy17682        338 EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGR  417 (490)
Q Consensus       338 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~  417 (490)
                      . ..+.  ........++++++++.||++-...+.|..+++.....  +.+.  .......++++..+ .+.++.-...+
T Consensus       158 ~-~~l~--~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~--~v~~--~~l~~P~glav~~~-~ly~tD~~~~~  229 (628)
T 4a0p_A          158 R-TTLV--PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR--EVIA--DDLPHPFGLTQYQD-YIYWTDWSRRS  229 (628)
T ss_dssp             C-EEEE--CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEE--ECCSCEEEEEEETT-EEEEEETTTTE
T ss_pred             e-EEEE--CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce--EEee--ccCCCceEEEEECC-EEEEecCCCCE
Confidence            2 2222  23455788999999999988888889999999976542  2222  12223457887764 44455433334


Q ss_pred             EEEec
Q psy17682        418 FFRLN  422 (490)
Q Consensus       418 ~~~~~  422 (490)
                      ++.++
T Consensus       230 I~~~d  234 (628)
T 4a0p_A          230 IERAN  234 (628)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            44443

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.85  E-value=0.00017  Score=73.93  Aligned_cols=222  Identities=8%  Similarity=-0.032  Sum_probs=122.8

Q ss_pred             CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC----CeeEEEEecCCCcEE
Q psy17682        187 DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT----GEIMIQIECHPDIVY  262 (490)
Q Consensus       187 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~----~~~~~~~~~~~~~v~  262 (490)
                      .+.|+..++...+....+.        ....+..++|.+.+..++++-...+.|+.+++..    ......+........
T Consensus       385 ~~~I~~id~~~~~~~~~~~--------~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~  456 (699)
T 1n7d_A          385 RHEVRKMTLDRSEYTSLIP--------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD  456 (699)
T ss_dssp             TTC-CEECTTSCCEECCSC--------CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CC
T ss_pred             ccceEEEeCCCCcceeeec--------cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcc
Confidence            4577777776654433221        2335678899987653444444568899999875    222222221222345


Q ss_pred             EEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeE
Q psy17682        263 SASWNWD-GSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIV  341 (490)
Q Consensus       263 ~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~  341 (490)
                      .|++.+. ++++++-...+.|.++++...... .+..........++++|.+..|.... .+..+.|...++...... .
T Consensus       457 glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~-~l~~~~~~~P~giavDp~~g~ly~td-~~~~~~I~~~~~dG~~~~-~  533 (699)
T 1n7d_A          457 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-TLFREQGSKPRAIVVDPVHGFMYWTD-WGTPAKIKKGGLNGVDIY-S  533 (699)
T ss_dssp             CEECCCSSSBCEECCTTTSCEEEEBSSSCCEE-EECCCSSCCCCCEECCSSSSCCEECC-CSSSCCEEBCCSSSCCCC-E
T ss_pred             eEEEEeeCCcEEEEeccCCeEEEEecCCCceE-EEEeCCCCCcceEEEccCCCcEEEcc-cCCCCeEEEEeCCCCCee-E
Confidence            6888864 455555556788999998755433 33222222367888998644443332 112367877777643321 2


Q ss_pred             EEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEe
Q psy17682        342 MVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRL  421 (490)
Q Consensus       342 ~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~  421 (490)
                      +.. ........++++|++..||++-+..+.|.++++.... ....+..........+|++..++ ++++.....+|+.+
T Consensus       534 l~~-~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~~~P~glavd~~~-lywtd~~~~~V~~~  610 (699)
T 1n7d_A          534 LVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFEDK-VFWTDIINEAIFSA  610 (699)
T ss_dssp             ESC-SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEECCCSSSCSSCCCCEEETTE-EEEECSTTTCEEEE
T ss_pred             EEe-CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEEEecCCcCCCceEeEEECCE-EEEEeCCCCeEEEE
Confidence            211 1223457899999988888888888899999987543 11122111111234567776653 44444333344444


Q ss_pred             c
Q psy17682        422 N  422 (490)
Q Consensus       422 ~  422 (490)
                      .
T Consensus       611 d  611 (699)
T 1n7d_A          611 N  611 (699)
T ss_dssp             E
T ss_pred             E
Confidence            3

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=97.85  E-value=0.017  Score=53.00  Aligned_cols=238  Identities=8%  Similarity=0.027  Sum_probs=124.5

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN  244 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd  244 (490)
                      ...+.+|.|.+ + ..++ ++.++.|.. ..+.++.-.....    ...+...+..+.+.+++. +++++ .++.|.. .
T Consensus        79 ~~~~~~i~~~~-~-~~~~-~g~~g~i~~-S~DgG~tW~~~~~----~~~~~~~~~~i~~~~~~~-~~~~~-~~g~v~~-S  147 (327)
T 2xbg_A           79 DYRFNSVSFQG-N-EGWI-VGEPPIMLH-TTDGGQSWSQIPL----DPKLPGSPRLIKALGNGS-AEMIT-NVGAIYR-T  147 (327)
T ss_dssp             CCEEEEEEEET-T-EEEE-EEETTEEEE-ESSTTSSCEECCC----CTTCSSCEEEEEEEETTE-EEEEE-TTCCEEE-E
T ss_pred             CccEEEEEecC-C-eEEE-EECCCeEEE-ECCCCCCceECcc----ccCCCCCeEEEEEECCCC-EEEEe-CCccEEE-E
Confidence            44688999986 3 4444 455664433 3333433222211    011234567788877763 55544 5565432 1


Q ss_pred             CCCCeeEEEE-ecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCC
Q psy17682        245 VGTGEIMIQI-ECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKM  323 (490)
Q Consensus       245 ~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~  323 (490)
                      .+.++.-... ......+..+++.+++.+++.+...+..+-.|-. ++.-..+.......+..+.+.+++.+++++.   
T Consensus       148 ~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~---  223 (327)
T 2xbg_A          148 KDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QTAWEPHNRTTSRRLHNMGFTPDGRLWMIVN---  223 (327)
T ss_dssp             SSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-CSSCEEEECCSSSCEEEEEECTTSCEEEEET---
T ss_pred             cCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-CCceeECCCCCCCccceeEECCCCCEEEEeC---
Confidence            2234333322 2445678999999988877766544434444421 2211122212223478888999998887763   


Q ss_pred             ceeEEEEecCCCCCCCeEEEe--ccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee-eCCCceeeE
Q psy17682        324 SERQYSLRAPDHLDEPIVMVE--LDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF-QTPDPQRGI  400 (490)
Q Consensus       324 ~~~~i~iwd~~~~~~~~~~~~--~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~i~~~  400 (490)
                       ++.+.+.+.+.+..-.....  ......+..+.+.+++..+ +++ .++.| ++....++.. ..+... ..+..+.++
T Consensus       224 -~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~-~~g-~~g~i-~~S~DgG~tW-~~~~~~~~~~~~~~~v  298 (327)
T 2xbg_A          224 -GGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVW-LAG-GAGAL-LCSQDGGQTW-QQDVDVKKVPSNFYKI  298 (327)
T ss_dssp             -TTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEE-EEE-STTCE-EEESSTTSSC-EECGGGTTSSSCCCEE
T ss_pred             -CceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEE-EEe-CCCeE-EEeCCCCccc-EEcCccCCCCCCeEEE
Confidence             56666653221110000000  1122357888898877765 555 36666 3444445422 222211 123467889


Q ss_pred             EEeeCceeEEeecceeEEEEecC
Q psy17682        401 GMMPKRGCDVNSCEIGRFFRLNN  423 (490)
Q Consensus       401 ~~sp~~~~l~~~~~~~~~~~~~~  423 (490)
                      .|.+++.+++.+. ...+++...
T Consensus       299 ~~~~~~~~~~~G~-~G~i~~~~~  320 (327)
T 2xbg_A          299 LFFSPDQGFILGQ-KGILLRYVT  320 (327)
T ss_dssp             EEEETTEEEEECS-TTEEEEECC
T ss_pred             EEECCCceEEEcC-CceEEEEcC
Confidence            9987777655553 335666554

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.78  E-value=0.011  Score=54.57  Aligned_cols=188  Identities=11%  Similarity=0.037  Sum_probs=111.2

Q ss_pred             CEEEEEEeeCCCCEEEEEe-------------CCCcEEEEECCCCe-eEEEE--ec-----CCCcEEEEEEcC--CCC-E
Q psy17682        217 RVGLVLWHPTAQNVLLTAG-------------SDNNVAIWNVGTGE-IMIQI--EC-----HPDIVYSASWNW--DGS-K  272 (490)
Q Consensus       217 ~v~~~~~~p~~~~~l~s~~-------------~dg~v~iwd~~~~~-~~~~~--~~-----~~~~v~~~~~~~--~~~-~  272 (490)
                      ....+...|+|  ++++++             .+|.|.++|+.+.. ....+  .+     ..-....+.+.+  ++. +
T Consensus        51 G~EDi~~~~~G--~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~  128 (355)
T 3sre_A           51 GSEDLEILPNG--LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVY  128 (355)
T ss_dssp             CCCEEEECTTS--EEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred             CcceeEEcCCC--eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEE
Confidence            34556666665  334443             68999999987421 12222  22     123567787766  454 4


Q ss_pred             EEEEe-C--CCeEEEEeCCCCc----eeeeeeecCCCceeEEEEeCCCcEEEEEeC--------------CCceeEEEEe
Q psy17682        273 LLTTC-K--DKKMRIINPRTGA----IEEEAVCHEGSKATRAIYLKSGLIFTTGFS--------------KMSERQYSLR  331 (490)
Q Consensus       273 l~~~~-~--dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~--------------~~~~~~i~iw  331 (490)
                      |+++. .  +.++.+|++....    .+.++.+..-.....+.+.++|.++++...              ....+.+..+
T Consensus       129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~  208 (355)
T 3sre_A          129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY  208 (355)
T ss_dssp             EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred             EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence            44443 3  4677787765432    223333333334789999999998877531              0123566666


Q ss_pred             cCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee-CceeEE
Q psy17682        332 APDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP-KRGCDV  410 (490)
Q Consensus       332 d~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~  410 (490)
                      |..  +. ...  ...-...+.++||||++.||++-+..+.|+.|++.....+ .....+.......+++..+ +|.+.+
T Consensus       209 d~~--~~-~~~--~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l-~~~~~~~~~g~PDGi~vD~e~G~lwv  282 (355)
T 3sre_A          209 SPN--DV-RVV--AEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTL-TPLRVLSFDTLVDNISVDPVTGDLWV  282 (355)
T ss_dssp             CTT--CC-EEE--EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCE-EEEEEEECSSEEEEEEECTTTCCEEE
T ss_pred             ECC--eE-EEe--ecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcE-ecCEEEeCCCCCceEEEeCCCCcEEE
Confidence            653  21 111  1222446889999999999888888899999999753222 2222333345678888888 587666


Q ss_pred             ee
Q psy17682        411 NS  412 (490)
Q Consensus       411 ~~  412 (490)
                      +.
T Consensus       283 a~  284 (355)
T 3sre_A          283 GC  284 (355)
T ss_dssp             EE
T ss_pred             Ee
Confidence            43

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=97.73  E-value=0.018  Score=57.84  Aligned_cols=229  Identities=7%  Similarity=-0.066  Sum_probs=131.8

Q ss_pred             CCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecc
Q psy17682        134 KSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLY  213 (490)
Q Consensus       134 ~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  213 (490)
                      .....|++.++..    ...   ....+...-+.+..++|++.++.++++-...+.|..+++........+      +..
T Consensus        15 ~~~~~I~~i~~~~----~~~---~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v------~~~   81 (619)
T 3s94_A           15 ANRRDLRLVDATN----GKE---NATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV------VVS   81 (619)
T ss_dssp             ECSSBEEEECCC----------------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEE------ECS
T ss_pred             eccccEEEEeCCC----Ccc---eEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEE------EeC
Confidence            3456677777751    110   111122233567899999877455666556778988887654211111      111


Q ss_pred             cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCc
Q psy17682        214 HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK--DKKMRIINPRTGA  291 (490)
Q Consensus       214 ~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~  291 (490)
                      .-.....+++.+.+.+++++-...+.|.+.++........+.........|++.|.+..|+.+..  .+.|...++....
T Consensus        82 ~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~  161 (619)
T 3s94_A           82 GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS  161 (619)
T ss_dssp             SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred             CCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc
Confidence            22467899999976656666667789999998654332223234455778999997555555443  4677777766433


Q ss_pred             eeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC
Q psy17682        292 IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS  371 (490)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg  371 (490)
                       ...+..........+++++++..|..+..  ..+.|...|++.........  ........+++..+  .||.+-...+
T Consensus       162 -~~~l~~~~~~~P~Glald~~~~~LY~aD~--~~~~I~~~~~dG~~~~~~~~--~~~~~P~gi~~~~~--~ly~td~~~~  234 (619)
T 3s94_A          162 -RFIIINSEIYWPNGLTLDYEEQKLYWADA--KLNFIHKSNLDGTNRQAVVK--GSLPHPFALTLFED--ILYWTDWSTH  234 (619)
T ss_dssp             -CEEEECSSCSSEEEEEEETTTTEEEEEET--TTCCEEEESSSCCEEC-----------CCCEEESSS--EEEEECTTTC
T ss_pred             -eEEEEeCCCCCCcEEEEEccCCEEEEEeC--CCCeEEEecCCCCccEEEEe--CCCCCceEEEEeCC--EEEEecCCCC
Confidence             33332222334789999987555544432  46778888887533222111  11122345566544  6777777788


Q ss_pred             eEEEEEecCCC
Q psy17682        372 VIRYFEITAEP  382 (490)
Q Consensus       372 ~i~iwd~~~~~  382 (490)
                      .|...|..+++
T Consensus       235 ~V~~~d~~tg~  245 (619)
T 3s94_A          235 SILACNKYTGE  245 (619)
T ss_dssp             SEEEEESSSCC
T ss_pred             EEEEEECCCCc
Confidence            89999987765

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=97.70  E-value=0.087  Score=56.89  Aligned_cols=252  Identities=11%  Similarity=0.064  Sum_probs=137.0

Q ss_pred             cCCeeEEEECCCC-----CCEEEEEeC-CCcEEEEECCCCCcccccccceeeecccccCEEEEEEee-CCCCEEEEEeCC
Q psy17682        165 KGPVLDIAWSPHD-----DNVIASGSE-DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHP-TAQNVLLTAGSD  237 (490)
Q Consensus       165 ~~~V~~~~~~p~~-----~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~d  237 (490)
                      .+.|.|+++.|..     ..+++.|.. |++|+|+++.+.+.+....     +. ......++.+.. .+..+|..|-.|
T Consensus       553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~-----L~-~~~~p~si~l~~~~~~~~L~igl~d  626 (1158)
T 3ei3_A          553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEM-----LG-GEIIPRSILMTTFESSHYLLCALGD  626 (1158)
T ss_dssp             SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEE-----CC-SSCCEEEEEEEEETTEEEEEEEETT
T ss_pred             CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEE-----CC-CCCCCcEEEEEEeCCCcEEEEEeCC
Confidence            4689999998643     268999986 9999999998654433211     11 112334444332 233467888888


Q ss_pred             CcEEEEECC--CCeeE--------------EEEecCCC-cE----------------------------EEEEEcCC--C
Q psy17682        238 NNVAIWNVG--TGEIM--------------IQIECHPD-IV----------------------------YSASWNWD--G  270 (490)
Q Consensus       238 g~v~iwd~~--~~~~~--------------~~~~~~~~-~v----------------------------~~~~~~~~--~  270 (490)
                      |.+.-+.+.  +++..              ..+..... .|                            ....|+..  .
T Consensus       627 G~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~l~~s~l~~~~v~~~~~F~se~~~  706 (1158)
T 3ei3_A          627 GALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYP  706 (1158)
T ss_dssp             SEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESSSSEEEEEBSSSCCCEEEEECCSSST
T ss_pred             CeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcCCceEEeccChHHhceEeccCcccCC
Confidence            887655443  33221              11111100 00                            01112211  1


Q ss_pred             CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCC---------------------------
Q psy17682        271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKM---------------------------  323 (490)
Q Consensus       271 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~---------------------------  323 (490)
                      .-++.. .++.++|..+...........+-+..+..++++|+.+.++.+..+.                           
T Consensus       707 ~g~v~~-~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  785 (1158)
T 3ei3_A          707 DSLALA-NNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSS  785 (1158)
T ss_dssp             TEEEEE-CSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECC
T ss_pred             CcEEEE-cCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccc
Confidence            123322 2345777666443322222222333478888988866554443100                           


Q ss_pred             -------------------ceeEEEEecCCCCCCCeEEEeccCCCceeee---eecCCC-CeEEEEec----------CC
Q psy17682        324 -------------------SERQYSLRAPDHLDEPIVMVELDTSNGVMFP---LYDPDT-NLVYLCGK----------GD  370 (490)
Q Consensus       324 -------------------~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~---~~s~~~-~~l~~~g~----------~d  370 (490)
                                         ....+++.|..+.+.. ....+.....+.++   .|..+. .++ +.|+          ..
T Consensus       786 ~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i-~~~~l~~nE~~~sv~~v~~~~~~~~~l-vVGTa~~~~~e~~~~~  863 (1158)
T 3ei3_A          786 SKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVL-HAHQFLQNEYALSLVSCKLGKDPNTYF-IVGTAMVYPEEAEPKQ  863 (1158)
T ss_dssp             CCCC----------CCCEEEEEEEEEEETTTCCEE-EEEECCTTEEEEEEEEECCTTCCCCEE-EEEEEECCTTCSSCCC
T ss_pred             cccccccccCchhhcCCceeeEEEEEEeCCCCeEE-EEEeCCCCcceEEEEEEEEccCCCEEE-EEEeeecCCCCCCCCc
Confidence                               1234666776655422 22233333444444   444443 455 6664          35


Q ss_pred             CeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecCCCceE
Q psy17682        371 SVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNSGLCQ  428 (490)
Q Consensus       371 g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~~~~~  428 (490)
                      |.|++|++...+  .+.+......+++++++-- +|+++++-+..+++|++...+.++
T Consensus       864 Gri~vf~v~~~k--L~lv~~~~v~g~v~al~~~-~g~Lla~ig~~l~vy~l~~~~~L~  918 (1158)
T 3ei3_A          864 GRIVVFQYSDGK--LQTVAEKEVKGAVYSMVEF-NGKLLASINSTVRLYEWTTEKELR  918 (1158)
T ss_dssp             EEEEEEEEETTE--EEEEEEEEESSCEEEEEEE-TTEEEEEETTEEEEEEECTTSCEE
T ss_pred             eEEEEEEEECCE--EEEEEEEEcCCcCEEEeee-CCEEEEEcCCEEEEEECCCCceEE
Confidence            899999998543  4455555556788888754 457777778899999998765344

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=97.63  E-value=0.038  Score=50.77  Aligned_cols=243  Identities=9%  Similarity=0.021  Sum_probs=127.9

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeC---CCCEEEEE--eCC
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPT---AQNVLLTA--GSD  237 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~s~--~~d  237 (490)
                      ..-...+.|+|.|+| .++++--..|.|++++..+++.......+ ............|+++|+   +..+.++-  ..+
T Consensus        29 ~gL~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~v~~~~-~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~  106 (347)
T 3das_A           29 TGLNSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTELGEVP-GVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD  106 (347)
T ss_dssp             CCCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECT-TCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred             cCCCCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEeeecccC-ceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence            334567899999998 67666655899999986555431110000 011224567899999995   32243332  234


Q ss_pred             CcEEEEECCCC----------eeEE-EEe-cCCCcEEEEEEcCCCCEEEEEeC-------------CCeEEEEeCCCCc-
Q psy17682        238 NNVAIWNVGTG----------EIMI-QIE-CHPDIVYSASWNWDGSKLLTTCK-------------DKKMRIINPRTGA-  291 (490)
Q Consensus       238 g~v~iwd~~~~----------~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~-  291 (490)
                      +.|.-|.+..+          +.+. .+. ...+.-..|+|.|||.++++.+.             .|.|.-.+....- 
T Consensus       107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip  186 (347)
T 3das_A          107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA  186 (347)
T ss_dssp             EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC
T ss_pred             CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc
Confidence            55666665441          1222 222 11223457999999987777542             3555555654320 


Q ss_pred             ------eeeee-eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEec--------CCCC-------CCCeEEEeccCC-
Q psy17682        292 ------IEEEA-VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRA--------PDHL-------DEPIVMVELDTS-  348 (490)
Q Consensus       292 ------~~~~~-~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd--------~~~~-------~~~~~~~~~~~~-  348 (490)
                            ....+ .++.+  ...++|+|+|.++++-........|.+..        ...+       ..+..  ...+. 
T Consensus       187 ~~nPf~~~~i~a~G~RN--p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~--~~~~~~  262 (347)
T 3das_A          187 PGNPFPGSPVYSYGHRN--VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVA--QWSTDE  262 (347)
T ss_dssp             TTCSSTTCCEEEBCCSB--CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSE--EECTTT
T ss_pred             CCCCCCCCeEEeeCCCC--cceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcE--ecCCCC
Confidence                  01111 14443  67899999988777543110112232211        1111       01111  11221 


Q ss_pred             CceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCceeEEeec
Q psy17682        349 NGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGCDVNSC  413 (490)
Q Consensus       349 ~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~~  413 (490)
                      .....++|.. |.. |...-..+.|....+.......+....+. ....+++|+..|||.+.++.+
T Consensus       263 ~ap~G~~~~~-g~~-~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td  326 (347)
T 3das_A          263 ASPSGIAYAE-GSV-WMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS  326 (347)
T ss_dssp             CCEEEEEEET-TEE-EEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred             CCCcceEEEc-Cce-eeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence            3456667763 443 35555566777677765431111011111 235789999999998877764

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=97.63  E-value=0.011  Score=54.03  Aligned_cols=191  Identities=9%  Similarity=0.135  Sum_probs=114.7

Q ss_pred             EEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCC----CCC--E-EEEEeC--CCcEEEEECC-CCC
Q psy17682        130 IRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPH----DDN--V-IASGSE--DCVVKVWQIP-DGG  199 (490)
Q Consensus       130 ~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~----~~~--~-l~s~~~--dg~i~iwd~~-~~~  199 (490)
                      +......+.+.+|++.         .+.++.+..  +.++.+..-|.    |+.  + +++.-.  +++|++|++. ..+
T Consensus        43 ii~t~k~~gL~Vydl~---------G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~  111 (355)
T 3amr_A           43 LITTNKKSGLVVYSLD---------GKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG  111 (355)
T ss_dssp             EEEEETTTEEEEEETT---------SCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC
T ss_pred             EEEEcCCCCEEEEcCC---------CcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC
Confidence            4444556789999985         223333332  56777776662    111  2 333333  5799999774 222


Q ss_pred             cccccccceeeecccccCEEEEEE--eeC-CCCEEEEEeCCCcEEEEECC-------CCeeEEEEecCCCcEEEEEEcCC
Q psy17682        200 ISRTLTEPVVDLLYHQRRVGLVLW--HPT-AQNVLLTAGSDNNVAIWNVG-------TGEIMIQIECHPDIVYSASWNWD  269 (490)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~v~~~~~--~p~-~~~~l~s~~~dg~v~iwd~~-------~~~~~~~~~~~~~~v~~~~~~~~  269 (490)
                      .+..+..+...+......+..+++  +|. +..++++...+|.+..|++.       +.+.++++. ..+.+..+...+.
T Consensus       112 ~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~  190 (355)
T 3amr_A          112 TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDE  190 (355)
T ss_dssp             CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETT
T ss_pred             ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCC
Confidence            233332210000011145666777  664 43367778888999999883       335677777 4567899999998


Q ss_pred             CCEEEEEeCCCeEEEEeCC-----CCceeeeee-ecCCCceeEEEEe--CCCc-EEEEEeCCCceeEEEEecCC
Q psy17682        270 GSKLLTTCKDKKMRIINPR-----TGAIEEEAV-CHEGSKATRAIYL--KSGL-IFTTGFSKMSERQYSLRAPD  334 (490)
Q Consensus       270 ~~~l~~~~~dg~i~iwd~~-----~~~~~~~~~-~~~~~~~~~~~~s--~~~~-~l~~~~~~~~~~~i~iwd~~  334 (490)
                      ...|+.+-++..|..+|.+     +++.+..+. ++-...+..+++-  ++++ +|++++.  .+..+.+||..
T Consensus       191 ~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ--G~~s~~Vydr~  262 (355)
T 3amr_A          191 YGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ--GNSSYAIYDRQ  262 (355)
T ss_dssp             TTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG--GGTEEEEEESS
T ss_pred             CCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC--CCCEEEEEECC
Confidence            8899999998888888865     233443332 2222236777764  4444 5555542  46789999986

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=97.56  E-value=0.088  Score=52.98  Aligned_cols=320  Identities=8%  Similarity=-0.019  Sum_probs=174.3

Q ss_pred             cccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccc
Q psy17682         42 YHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISED  121 (490)
Q Consensus        42 gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  121 (490)
                      +.-..+..|+|++.+..++.+-..++.|..+++......                .....+       ......+++.+.
T Consensus        34 ~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~----------------~v~~~g-------~~~P~GlAvD~~   90 (628)
T 4a0p_A           34 TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALE----------------HVVEFG-------LDYPEGMAVDWL   90 (628)
T ss_dssp             CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----------------EEECSS-------CSCCCEEEEETT
T ss_pred             CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE----------------EEEeCC-------CCCcceEEEEeC
Confidence            334568899999987677777777889888888653310                010000       012345555443


Q ss_pred             cccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCccee-ecccCCeeEEEECCCCCCEEEEE-eCCCcEEEEECCCCC
Q psy17682        122 YVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALV-GGHKGPVLDIAWSPHDDNVIASG-SEDCVVKVWQIPDGG  199 (490)
Q Consensus       122 ~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~-~~dg~i~iwd~~~~~  199 (490)
                      .    ..+.++-...+.|.+.++....         ..++ ...-....+|++.|.++.++++- +..+.|...++....
T Consensus        91 ~----~~LY~tD~~~~~I~v~~~dG~~---------~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~  157 (628)
T 4a0p_A           91 G----KNLYWADTGTNRIEVSKLDGQH---------RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE  157 (628)
T ss_dssp             T----TEEEEEETTTTEEEEEETTSTT---------CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred             C----CEEEEEECCCCEEEEEecCCCc---------EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc
Confidence            2    1234445667888888875211         1122 23335578999998654555553 235677777765433


Q ss_pred             cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC
Q psy17682        200 ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD  279 (490)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  279 (490)
                      . ..+       ...-.....+++.+++..++++=...+.|..+|+..... ..+.........+++.. +..+++-...
T Consensus       158 ~-~~l-------~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~  227 (628)
T 4a0p_A          158 R-TTL-------VPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSR  227 (628)
T ss_dssp             C-EEE-------ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTT
T ss_pred             e-EEE-------ECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCC
Confidence            2 221       113456789999998764555555678899999865443 33443444566888864 4555555567


Q ss_pred             CeEEEEeCCCCceeeeeeecCCC-----------------------ceeEEEE-eCCCc---------------------
Q psy17682        280 KKMRIINPRTGAIEEEAVCHEGS-----------------------KATRAIY-LKSGL---------------------  314 (490)
Q Consensus       280 g~i~iwd~~~~~~~~~~~~~~~~-----------------------~~~~~~~-s~~~~---------------------  314 (490)
                      +.|...|..+++....+......                       ....++. .|.+.                     
T Consensus       228 ~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~  307 (628)
T 4a0p_A          228 RSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAP  307 (628)
T ss_dssp             TEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECC
T ss_pred             CEEEEEECCCCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccc
Confidence            88999997766543332211000                       0000111 11111                     


Q ss_pred             --EEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee-e
Q psy17682        315 --IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT-F  391 (490)
Q Consensus       315 --~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~-~  391 (490)
                        +|+.+.    ...|+-..+.................+..+.|++.++.||.+=...+.|+.++..... ....+.. .
T Consensus       308 ~~~Ll~s~----~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~-~~~v~~~~~  382 (628)
T 4a0p_A          308 TTFLLFSQ----KSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQ-GFTVVVSSV  382 (628)
T ss_dssp             SSEEEEEE----TTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEC---
T ss_pred             cceeeeec----cceEEEEecccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCC-ceEEEEccc
Confidence              222221    2234333443222111122223334577899999888888877777888888776543 1222221 0


Q ss_pred             ---eCCCceeeEEEeeCce-eEEee
Q psy17682        392 ---QTPDPQRGIGMMPKRG-CDVNS  412 (490)
Q Consensus       392 ---~~~~~i~~~~~sp~~~-~l~~~  412 (490)
                         .......++++...+. +.++.
T Consensus       383 ~~~~~~~~p~glAvD~~~~nLY~td  407 (628)
T 4a0p_A          383 PSQNLEIQPYDLSIDIYSRYIYWTC  407 (628)
T ss_dssp             -----CCCEEEEEEETTTTEEEEEE
T ss_pred             ccccccCCcceEEeeccCCeEEEEc
Confidence               0123578899988754 43443

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=97.49  E-value=0.17  Score=54.64  Aligned_cols=172  Identities=11%  Similarity=0.069  Sum_probs=96.9

Q ss_pred             cEEEEECCCCeeEEEEec-CCCcEEEEEE---cCC-CCEEEEEe----------CCCeEEEEeCCCCceeeeeeecCCCc
Q psy17682        239 NVAIWNVGTGEIMIQIEC-HPDIVYSASW---NWD-GSKLLTTC----------KDKKMRIINPRTGAIEEEAVCHEGSK  303 (490)
Q Consensus       239 ~v~iwd~~~~~~~~~~~~-~~~~v~~~~~---~~~-~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~  303 (490)
                      .|++.|..+.+.+..+.- ....+.+++.   ..+ ..+|++|+          ..|.|++|++..++........-...
T Consensus       808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~  887 (1158)
T 3ei3_A          808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGA  887 (1158)
T ss_dssp             EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSC
T ss_pred             EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCc
Confidence            367777777776666552 2334555553   322 36888886          34789999987544332222222223


Q ss_pred             eeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682        304 ATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP  383 (490)
Q Consensus       304 ~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~  383 (490)
                      +++++-- +|++++ |-    ...+++|++...+... ... .....+..+.....++++ +.|..-..|.++..+....
T Consensus       888 v~al~~~-~g~Lla-~i----g~~l~vy~l~~~~~L~-~~~-~~~~~i~~~~l~~~~~~I-~vgD~~~Sv~~~~y~~~~~  958 (1158)
T 3ei3_A          888 VYSMVEF-NGKLLA-SI----NSTVRLYEWTTEKELR-TEC-NHYNNIMALYLKTKGDFI-LVGDLMRSVLLLAYKPMEG  958 (1158)
T ss_dssp             EEEEEEE-TTEEEE-EE----TTEEEEEEECTTSCEE-EEE-EECCCSCEEEEEEETTEE-EEEESSBCEEEEEEETTTT
T ss_pred             CEEEeee-CCEEEE-Ec----CCEEEEEECCCCceEE-EEe-eccccEEEEEEeccCCEE-EEEEhhheEEEEEEEcCCC
Confidence            6666533 465554 43    5689999998644222 111 111123322333356777 5677667788777765444


Q ss_pred             eeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEE
Q psy17682        384 FVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFR  420 (490)
Q Consensus       384 ~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~  420 (490)
                      ....+..-..+..++++.|-.++.+++ ++...+++.
T Consensus       959 ~L~~~a~D~~~~~vta~~~ld~~t~l~-aD~~gNl~v  994 (1158)
T 3ei3_A          959 NFEEIARDFNPNWMSAVEILDDDNFLG-AENAFNLFV  994 (1158)
T ss_dssp             EEEEEEECCSCBCEEEEEEEETTEEEE-EETTSEEEE
T ss_pred             eEEEEEeecccccEEEEEEEccCcEEE-EcCCCcEEE
Confidence            444555444567889999988776544 444434443

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=97.46  E-value=0.089  Score=50.61  Aligned_cols=112  Identities=8%  Similarity=0.070  Sum_probs=61.9

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceee-ecccccCEEEEEEeeC---CCCEEEEEeC----
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD-LLYHQRRVGLVLWHPT---AQNVLLTAGS----  236 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~p~---~~~~l~s~~~----  236 (490)
                      -...++|+|.|+| +++++-...+.|++++..++........+... ..........|+|+|+   +..+.++-+.    
T Consensus        26 l~~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~  104 (454)
T 1cru_A           26 LNKPHALLWGPDN-QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK  104 (454)
T ss_dssp             CSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred             CCCceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence            3467799999998 66665443347888876545432111100000 0113467889999995   4334444332    


Q ss_pred             --------CCcEEEEECCCC-------eeEE-EEe-cCCCcEEEEEEcCCCCEEEEEe
Q psy17682        237 --------DNNVAIWNVGTG-------EIMI-QIE-CHPDIVYSASWNWDGSKLLTTC  277 (490)
Q Consensus       237 --------dg~v~iwd~~~~-------~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~  277 (490)
                              ...|.-++...+       +.+. .+. ...+....|+|.|||.++++.+
T Consensus       105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G  162 (454)
T 1cru_A          105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG  162 (454)
T ss_dssp             C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred             CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence                    134555554321       1122 122 1234578999999999777755

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.35  E-value=0.03  Score=50.71  Aligned_cols=230  Identities=10%  Similarity=0.054  Sum_probs=111.0

Q ss_pred             CEEEEEeC--CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC----CcEEEEECCCCeeEE
Q psy17682        179 NVIASGSE--DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD----NNVAIWNVGTGEIMI  252 (490)
Q Consensus       179 ~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d----g~v~iwd~~~~~~~~  252 (490)
                      .+++.|+.  ...+.+||..+++-...-..|     ........+.  -++ .+++.|+.+    ..+.+||+.+.+-..
T Consensus        13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p-----~~r~~~~~~~--~~~-~lyv~GG~~~~~~~~~~~~d~~~~~W~~   84 (306)
T 3ii7_A           13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPF-----EKRRDAACVF--WDN-VVYILGGSQLFPIKRMDCYNVVKDSWYS   84 (306)
T ss_dssp             EEEEEECCSSTTSEEEEETTTTEEEECCCCS-----CCCBSCEEEE--ETT-EEEEECCBSSSBCCEEEEEETTTTEEEE
T ss_pred             eEEEEeCCCCCceEEEecCCCCCEecCCCCC-----cccceeEEEE--ECC-EEEEEeCCCCCCcceEEEEeCCCCeEEE
Confidence            45556654  357888998766432211111     1111112222  244 477777754    678899998775332


Q ss_pred             E--EecCCCcEEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCc
Q psy17682        253 Q--IECHPDIVYSASWNWDGSKLLTTCKD------KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMS  324 (490)
Q Consensus       253 ~--~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~  324 (490)
                      .  +.........+.+  ++++++.|+.+      ..+.+||..+.+-...-..... .....+..-++++++.|+....
T Consensus        85 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~  161 (306)
T 3ii7_A           85 KLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQ-RCSHGMVEANGLIYVCGGSLGN  161 (306)
T ss_dssp             EECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEECCEESC
T ss_pred             CCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCC-cceeEEEEECCEEEEECCCCCC
Confidence            2  2111111222222  56777777755      4589999987753322111111 1111122236777777753211


Q ss_pred             ------eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC-----CeEEEEEecCCCCeeEEeeeeeC
Q psy17682        325 ------ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD-----SVIRYFEITAEPPFVHYINTFQT  393 (490)
Q Consensus       325 ------~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d-----g~i~iwd~~~~~~~~~~~~~~~~  393 (490)
                            ...+.+||+.+..- ...........-..++.. ++ .|++.|+.+     ..+.+||..+.+  ...+.....
T Consensus       162 ~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~  236 (306)
T 3ii7_A          162 NVSGRVLNSCEVYDPATETW-TELCPMIEARKNHGLVFV-KD-KIFAVGGQNGLGGLDNVEYYDIKLNE--WKMVSPMPW  236 (306)
T ss_dssp             TTTCEECCCEEEEETTTTEE-EEECCCSSCCBSCEEEEE-TT-EEEEECCEETTEEBCCEEEEETTTTE--EEECCCCSC
T ss_pred             CCcccccceEEEeCCCCCeE-EECCCccchhhcceEEEE-CC-EEEEEeCCCCCCCCceEEEeeCCCCc--EEECCCCCC
Confidence                  35588888876531 111111111111122222 44 455666543     357888888764  223322222


Q ss_pred             CCceeeEEEeeCceeEEeec-------ceeEEEEecCCC
Q psy17682        394 PDPQRGIGMMPKRGCDVNSC-------EIGRFFRLNNSG  425 (490)
Q Consensus       394 ~~~i~~~~~sp~~~~l~~~~-------~~~~~~~~~~~~  425 (490)
                      ...-.+++.. ++.+++.++       ..+..|++.+++
T Consensus       237 ~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~  274 (306)
T 3ii7_A          237 KGVTVKCAAV-GSIVYVLAGFQGVGRLGHILEYNTETDK  274 (306)
T ss_dssp             CBSCCEEEEE-TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred             CccceeEEEE-CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence            1111222222 556666554       245667777666

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.35  E-value=0.036  Score=50.05  Aligned_cols=230  Identities=12%  Similarity=0.091  Sum_probs=109.9

Q ss_pred             CEEEEEe-CC-----CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC-----CcEEEEECCC
Q psy17682        179 NVIASGS-ED-----CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-----NNVAIWNVGT  247 (490)
Q Consensus       179 ~~l~s~~-~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~v~iwd~~~  247 (490)
                      .+++.|+ .+     ..+.+||..+++-... ..    +.........+.  .++ .+++.|+.+     ..+.+||+.+
T Consensus        16 ~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~-~~----~p~~r~~~~~~~--~~~-~l~v~GG~~~~~~~~~~~~~d~~~   87 (301)
T 2vpj_A           16 VLLVVGGFGSQQSPIDVVEKYDPKTQEWSFL-PS----ITRKRRYVASVS--LHD-RIYVIGGYDGRSRLSSVECLDYTA   87 (301)
T ss_dssp             EEEEECCEETTTEECCCEEEEETTTTEEEEC-CC----CSSCCBSCEEEE--ETT-EEEEECCBCSSCBCCCEEEEETTC
T ss_pred             EEEEEeCccCCCcceeEEEEEcCCCCeEEeC-CC----CChhhccccEEE--ECC-EEEEEcCCCCCccCceEEEEECCC
Confidence            4555555 22     3688889876643221 11    111111112222  244 477777754     4688999887


Q ss_pred             Ce---eEEE--EecCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEE
Q psy17682        248 GE---IMIQ--IECHPDIVYSASWNWDGSKLLTTCKD-----KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFT  317 (490)
Q Consensus       248 ~~---~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~  317 (490)
                      .+   -...  +.........+.+  +++.++.|+.+     ..+.+||+.+.+-...-..... .....+...++++++
T Consensus        88 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv  164 (301)
T 2vpj_A           88 DEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA-REGAGLVVASGVIYC  164 (301)
T ss_dssp             CTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC-CBSCEEEEETTEEEE
T ss_pred             CCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC-cccceEEEECCEEEE
Confidence            65   2221  1111111222222  56777777643     3689999887654332221111 111222223677887


Q ss_pred             EEeCCCc--eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC-----CeEEEEEecCCCCeeEEeee
Q psy17682        318 TGFSKMS--ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD-----SVIRYFEITAEPPFVHYINT  390 (490)
Q Consensus       318 ~~~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d-----g~i~iwd~~~~~~~~~~~~~  390 (490)
                      .|+.++.  ...+.+||+.+..-. ..........-..++. -++ .|++.|+.+     ..+.+||+.+.+  ...+..
T Consensus       165 ~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~-~~~-~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~  239 (301)
T 2vpj_A          165 LGGYDGLNILNSVEKYDPHTGHWT-NVTPMATKRSGAGVAL-LND-HIYVVGGFDGTAHLSSVEAYNIRTDS--WTTVTS  239 (301)
T ss_dssp             ECCBCSSCBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEE-ETT-EEEEECCBCSSSBCCCEEEEETTTTE--EEEECC
T ss_pred             ECCCCCCcccceEEEEeCCCCcEE-eCCCCCcccccceEEE-ECC-EEEEEeCCCCCcccceEEEEeCCCCc--EEECCC
Confidence            7763321  356888888764311 1111111111112222 234 455677654     468899988764  223322


Q ss_pred             eeCCCceeeEEEeeCceeEEeec-------ceeEEEEecCCC
Q psy17682        391 FQTPDPQRGIGMMPKRGCDVNSC-------EIGRFFRLNNSG  425 (490)
Q Consensus       391 ~~~~~~i~~~~~sp~~~~l~~~~-------~~~~~~~~~~~~  425 (490)
                      ......-.+++ .-++.+++.++       ..+.+|++.++.
T Consensus       240 ~p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  280 (301)
T 2vpj_A          240 MTTPRCYVGAT-VLRGRLYAIAGYDGNSLLSSIECYDPIIDS  280 (301)
T ss_dssp             CSSCCBSCEEE-EETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred             CCCcccceeEE-EECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence            22221112222 23566666553       244566666655

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.13  E-value=0.16  Score=46.92  Aligned_cols=145  Identities=9%  Similarity=0.079  Sum_probs=81.6

Q ss_pred             CEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee--EEEEe---cCCCcEEEEEEcCC---CCEEEEEeC-C-----CeE
Q psy17682        217 RVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI--MIQIE---CHPDIVYSASWNWD---GSKLLTTCK-D-----KKM  282 (490)
Q Consensus       217 ~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~-d-----g~i  282 (490)
                      ....++|.|+|. ++ .+..+|.|.+++  +++.  +..+.   ........++++|+   +..|.++.. .     +.|
T Consensus        32 ~P~~ia~~pdG~-l~-V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v  107 (352)
T 2ism_A           32 VPWALAFLPDGG-ML-IAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV  107 (352)
T ss_dssp             CEEEEEECTTSC-EE-EEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred             CceEEEEcCCCe-EE-EEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence            467999999995 54 445679999998  4442  22221   12456899999998   444444433 2     678


Q ss_pred             EEEeCCCCce-----e-eeeee--cCCCceeEEEEeCCCcEEEEEeCCC----------ceeEEEEecCCCC--------
Q psy17682        283 RIINPRTGAI-----E-EEAVC--HEGSKATRAIYLKSGLIFTTGFSKM----------SERQYSLRAPDHL--------  336 (490)
Q Consensus       283 ~iwd~~~~~~-----~-~~~~~--~~~~~~~~~~~s~~~~~l~~~~~~~----------~~~~i~iwd~~~~--------  336 (490)
                      ..++...+..     + ..+..  ........++|.|+|.++++-++.+          ..+.|..++.+..        
T Consensus       108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~  187 (352)
T 2ism_A          108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL  187 (352)
T ss_dssp             EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred             EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence            8888764321     1 11221  1111246899999998777643211          1256666666531        


Q ss_pred             ----CCCeEEEeccCCCceeeeeecCCCCeEEEEe
Q psy17682        337 ----DEPIVMVELDTSNGVMFPLYDPDTNLVYLCG  367 (490)
Q Consensus       337 ----~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g  367 (490)
                          ... .+....+ .....++|+|+...|+++-
T Consensus       188 ~~~~~~~-~i~a~G~-rnp~g~a~d~~~g~l~v~d  220 (352)
T 2ism_A          188 GRRGARP-EVYSLGH-RNPQGLAWHPKTGELFSSE  220 (352)
T ss_dssp             TCTTSCT-TEEEECC-SEECCCEECTTTCCEEEEE
T ss_pred             CCCCCCc-cEEEEcC-CCcccEEEECCCCCEEEEE
Confidence                011 1112122 3467889999433444543

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.04  E-value=0.2  Score=46.36  Aligned_cols=146  Identities=5%  Similarity=-0.065  Sum_probs=81.8

Q ss_pred             cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe-eEEEEe---cCCCcEEEEEEcCC---CCEEEEEeC----C----C
Q psy17682        216 RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE-IMIQIE---CHPDIVYSASWNWD---GSKLLTTCK----D----K  280 (490)
Q Consensus       216 ~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~----d----g  280 (490)
                      .....++|.|++.  |+.+..+|.|++++. +++ .+..+.   ........|+++|+   +..|.++..    +    +
T Consensus        29 ~~P~~ia~~pdG~--l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~  105 (354)
T 3a9g_A           29 EVPWSIAPLGGGR--YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN  105 (354)
T ss_dssp             SCEEEEEEEETTE--EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred             CCCeEEEEcCCCe--EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence            3468999999984  555566799999973 454 222221   12356889999997   444444432    3    5


Q ss_pred             eEEEEeCCCC--ce-----e-eeeeecCCCceeEEEEeCCCcEEEEEeCCC----------ceeEEEEecCCCCC---C-
Q psy17682        281 KMRIINPRTG--AI-----E-EEAVCHEGSKATRAIYLKSGLIFTTGFSKM----------SERQYSLRAPDHLD---E-  338 (490)
Q Consensus       281 ~i~iwd~~~~--~~-----~-~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~----------~~~~i~iwd~~~~~---~-  338 (490)
                      .|..|+....  ..     + ..+..........++|.|+|.++++-++.+          ..+.|..++.+..-   . 
T Consensus       106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np  185 (354)
T 3a9g_A          106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP  185 (354)
T ss_dssp             EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred             EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence            6777876644  11     1 112211111256799999998777643211          12456666654320   0 


Q ss_pred             --CeEEEeccCCCceeeeeecC-CCCeEEEE
Q psy17682        339 --PIVMVELDTSNGVMFPLYDP-DTNLVYLC  366 (490)
Q Consensus       339 --~~~~~~~~~~~~i~~~~~s~-~~~~l~~~  366 (490)
                        ...+....+ .....++|+| +|+.. ++
T Consensus       186 f~~~~i~a~G~-rnp~Gla~d~~~g~l~-v~  214 (354)
T 3a9g_A          186 FPNSPIWSYGH-RNPQGIDWHRASGVMV-AT  214 (354)
T ss_dssp             STTCCEEEECC-SCCCEEEECTTTCCEE-EE
T ss_pred             CCCCcEEEEcc-CCcceEEEeCCCCCEE-EE
Confidence              011222222 3457899999 55544 44

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=96.93  E-value=0.12  Score=48.27  Aligned_cols=151  Identities=15%  Similarity=0.129  Sum_probs=90.8

Q ss_pred             cCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecC---CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC---C--
Q psy17682        267 NWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHE---GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD---E--  338 (490)
Q Consensus       267 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~---~--  338 (490)
                      ..+|..++.+- ++.||.-++......+.+....   -..+..+..+|+|.+||..+    +..|.|-.+....   .  
T Consensus        29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g----~~~V~Vv~LP~~~~~~~~~  103 (452)
T 3pbp_A           29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN----DNEIFVMEVPWGYSNVEDV  103 (452)
T ss_dssp             ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC----SSEEEEEECCTTCSCCCCH
T ss_pred             EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec----CCeEEEEEecCccccCccc
Confidence            33555555544 4778888877554445554331   21478899999999999986    6677777666221   1  


Q ss_pred             ----CeE--EEecc-----CCCceeeeeecCCCC---eEEEEecCCCeEEEEEecCCCCeeEEee----eee---CCCce
Q psy17682        339 ----PIV--MVELD-----TSNGVMFPLYDPDTN---LVYLCGKGDSVIRYFEITAEPPFVHYIN----TFQ---TPDPQ  397 (490)
Q Consensus       339 ----~~~--~~~~~-----~~~~i~~~~~s~~~~---~l~~~g~~dg~i~iwd~~~~~~~~~~~~----~~~---~~~~i  397 (490)
                          +..  ....+     ....|..+.|+|-+.   .| ++-..|+.|++||+.........+.    .+.   ....|
T Consensus       104 ~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~L-VVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev  182 (452)
T 3pbp_A          104 SIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCI-VVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDI  182 (452)
T ss_dssp             HHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEE-EEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCE
T ss_pred             ccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeE-EEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceE
Confidence                011  11222     246699999999653   45 5567899999999986321111221    111   11457


Q ss_pred             eeEEEeeCceeEEe--ecceeEEEEecC
Q psy17682        398 RGIGMMPKRGCDVN--SCEIGRFFRLNN  423 (490)
Q Consensus       398 ~~~~~sp~~~~l~~--~~~~~~~~~~~~  423 (490)
                      .+++|.+++-.|..  ..+.+.+|-+..
T Consensus       183 ~S~~Fg~~~lTLYvl~~t~~GDIYAlcP  210 (452)
T 3pbp_A          183 TDLEFSKDGLTLYCLNTTEGGDIFAFYP  210 (452)
T ss_dssp             EEEEECTTSSCEEEEECTTSCEEEEESS
T ss_pred             EEEEEcCCCcEEEEEecCCCCCEEEECC
Confidence            88999997654444  335555666554

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=96.85  E-value=0.36  Score=46.33  Aligned_cols=252  Identities=8%  Similarity=-0.002  Sum_probs=123.2

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC---cccccccceee--ecccccCEEEEEEeeC---CCCEEEEEeC-
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG---ISRTLTEPVVD--LLYHQRRVGLVLWHPT---AQNVLLTAGS-  236 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~--~~~~~~~v~~~~~~p~---~~~~l~s~~~-  236 (490)
                      ..-+.|+|.|+|...++++...|.|++++.....   .+..+......  ..........|+|+|+   ...+.++-+. 
T Consensus        14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~   93 (463)
T 2wg3_C           14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN   93 (463)
T ss_dssp             SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred             CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence            4567999999984245556788999999743221   11111110000  0012467889999996   2224443322 


Q ss_pred             -C----------CcEEEEECCC----------CeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeCC--------------
Q psy17682        237 -D----------NNVAIWNVGT----------GEIMIQIE--CHPDIVYSASWNWDGSKLLTTCKD--------------  279 (490)
Q Consensus       237 -d----------g~v~iwd~~~----------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d--------------  279 (490)
                       +          ..|.-|.+..          .+.+..+.  ........|+|.|||.++++.+..              
T Consensus        94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~  173 (463)
T 2wg3_C           94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLS  173 (463)
T ss_dssp             CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCC
T ss_pred             CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCccccccCcC
Confidence             1          1344455532          12333332  223446899999999877776543              


Q ss_pred             ---CeEEEEeCCCC------c-------------eeeee-eecCCCceeEEEEeCC-----CcEEEEEeCC-Cce-eEEE
Q psy17682        280 ---KKMRIINPRTG------A-------------IEEEA-VCHEGSKATRAIYLKS-----GLIFTTGFSK-MSE-RQYS  329 (490)
Q Consensus       280 ---g~i~iwd~~~~------~-------------~~~~~-~~~~~~~~~~~~~s~~-----~~~l~~~~~~-~~~-~~i~  329 (490)
                         |.|.-.|....      .             ....+ .+|.+  ...++|.|.     |.+.+.+++. +.+ ..-.
T Consensus       174 ~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RN--p~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~e  251 (463)
T 2wg3_C          174 DFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHD--PGRCAVDRHPTDININLTILCSDSNGKNRSSAR  251 (463)
T ss_dssp             SCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSS--CCBEEEESSCSSTTCSEEEEEECC------CEE
T ss_pred             CCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCC--cceEEECCCCCCcccceEEEecccCCCCCCCCe
Confidence               23444454431      0             00111 14443  678899997     4433323321 111 0112


Q ss_pred             EecCCCCC-----CCeEEEeccCC--CceeeeeecC-------CCCeEEEEecCCCeEEEEEecCCCCeeE--Ee-ee--
Q psy17682        330 LRAPDHLD-----EPIVMVELDTS--NGVMFPLYDP-------DTNLVYLCGKGDSVIRYFEITAEPPFVH--YI-NT--  390 (490)
Q Consensus       330 iwd~~~~~-----~~~~~~~~~~~--~~i~~~~~s~-------~~~~l~~~g~~dg~i~iwd~~~~~~~~~--~~-~~--  390 (490)
                      |..+..+.     .+.  ....+.  ..+..+.|-.       .|.++ + +...+.|....+........  .+ ..  
T Consensus       252 i~~i~~G~~yG~~~P~--~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f-~-~~~~g~i~~~~~~~~~~~~~~~~~~~g~~  327 (463)
T 2wg3_C          252 ILQIIKGKDYESEPSL--LEFKPFSNGPLVGGFVYRGCQSERLYGSYV-F-GDRNGNFLTLQQSPVTKQWQEKPLCLGTS  327 (463)
T ss_dssp             EEEEC----CCSCCCC--EECCC----CEEEEEECCCSSCTTTTTCEE-E-EETTSCEEEEEC-----CCEEEEECEEET
T ss_pred             EeeeccCCCCCCCCCe--EEeeCCCCccccceEEEeCCCChhhcceEE-E-ecCCCcEEEEEeCCCCceeeEEEeecCCc
Confidence            22222111     222  222333  3566666632       23455 3 33346665555544322111  11 00  


Q ss_pred             ----eeCCCceeeEEEeeCceeEEeec-------ceeEEEEecC
Q psy17682        391 ----FQTPDPQRGIGMMPKRGCDVNSC-------EIGRFFRLNN  423 (490)
Q Consensus       391 ----~~~~~~i~~~~~sp~~~~l~~~~-------~~~~~~~~~~  423 (490)
                          ......+.++++.|||.+.++.+       ...+||++..
T Consensus       328 ~~~~~~~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~~  371 (463)
T 2wg3_C          328 GSCRGYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVD  371 (463)
T ss_dssp             TSSCSCCCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEEC
T ss_pred             ccccccccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEecC
Confidence                01124689999999998888775       4678999874

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=96.75  E-value=0.085  Score=47.78  Aligned_cols=230  Identities=10%  Similarity=0.044  Sum_probs=107.0

Q ss_pred             CEEEEEeCC----CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC----C-----CcEEEEEC
Q psy17682        179 NVIASGSED----CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS----D-----NNVAIWNV  245 (490)
Q Consensus       179 ~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~----d-----g~v~iwd~  245 (490)
                      .+++.|+.+    ..+.+||..+++-...-..|. ....|     +++.. ++ .+++.|+.    +     ..+.+||+
T Consensus        26 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~-----~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~~d~   97 (308)
T 1zgk_A           26 LIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQV-PRSGL-----AGCVV-GG-LLYAVGGRNNSPDGNTDSSALDCYNP   97 (308)
T ss_dssp             CEEEECCBSSSBCCCEEEEETTTTEEEECCCCSS-CCBSC-----EEEEE-TT-EEEEECCEEEETTEEEECCCEEEEET
T ss_pred             EEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCc-ccccc-----eEEEE-CC-EEEEECCCcCCCCCCeecceEEEECC
Confidence            566666532    368888887664322111110 01111     12222 44 47777765    2     46888998


Q ss_pred             CCCeeEEE--EecCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEE
Q psy17682        246 GTGEIMIQ--IECHPDIVYSASWNWDGSKLLTTCKD-----KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTT  318 (490)
Q Consensus       246 ~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~  318 (490)
                      .+.+-...  +.........+.+  +++.++.|+.+     ..+.+||+.+.+-...-.......-..++. -++++++.
T Consensus        98 ~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~  174 (308)
T 1zgk_A           98 MTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV-LNRLLYAV  174 (308)
T ss_dssp             TTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEE
T ss_pred             CCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEE-ECCEEEEE
Confidence            87653221  1111111222223  56777776643     458899998765332211111110112222 26777777


Q ss_pred             EeCCCc--eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC-----CeEEEEEecCCCCeeEEeeee
Q psy17682        319 GFSKMS--ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD-----SVIRYFEITAEPPFVHYINTF  391 (490)
Q Consensus       319 ~~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d-----g~i~iwd~~~~~~~~~~~~~~  391 (490)
                      |+.++.  ...+.+||+.+..-. ..........-..++.. ++ .|++.|+.+     ..+.+||+.+.+  ...+...
T Consensus       175 GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~  249 (308)
T 1zgk_A          175 GGFDGTNRLNSAECYYPERNEWR-MITAMNTIRSGAGVCVL-HN-CIYAAGGYDGQDQLNSVERYDVETET--WTFVAPM  249 (308)
T ss_dssp             CCBCSSCBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEEE-TT-EEEEECCBCSSSBCCCEEEEETTTTE--EEECCCC
T ss_pred             eCCCCCCcCceEEEEeCCCCeEe-eCCCCCCccccceEEEE-CC-EEEEEeCCCCCCccceEEEEeCCCCc--EEECCCC
Confidence            763322  356888888764311 11111111111122222 34 455677654     468899988764  2233222


Q ss_pred             eCCCceeeEEEeeCceeEEeecc-------eeEEEEecCCC
Q psy17682        392 QTPDPQRGIGMMPKRGCDVNSCE-------IGRFFRLNNSG  425 (490)
Q Consensus       392 ~~~~~i~~~~~sp~~~~l~~~~~-------~~~~~~~~~~~  425 (490)
                      .....-.+++.. ++.+++.++.       .+.+|++.++.
T Consensus       250 p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~  289 (308)
T 1zgk_A          250 KHRRSALGITVH-QGRIYVLGGYDGHTFLDSVECYDPDTDT  289 (308)
T ss_dssp             SSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             CCCccceEEEEE-CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence            222112233333 5566555532       34456666554

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=96.68  E-value=0.42  Score=44.78  Aligned_cols=234  Identities=12%  Similarity=0.106  Sum_probs=143.9

Q ss_pred             cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc
Q psy17682        124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT  203 (490)
Q Consensus       124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~  203 (490)
                      ++|.++.-..+.+..+.|.++..    ....   .    ...-...+.-.+|.. +.+|.=. ..++.|+|+++...++.
T Consensus        35 DkyicVrE~~~~~~~vvIiDl~~----~~~~---~----rrpi~AdsAIMnP~~-~iiALra-g~~lQiFnle~K~klks  101 (494)
T 1bpo_A           35 DKFICIREKVGEQAQVVIIDMND----PSNP---I----RRPISADSAIMNPAS-KVIALKA-GKTLQIFNIEMKSKMKA  101 (494)
T ss_dssp             TTEEEEEECCTTCCEEEEEETTS----TTSC---E----EEECCCSEEEECSSS-SCEEEEE-TTEEEEEETTTTEEEEE
T ss_pred             CceEEEEecCCCCCeEEEEECCC----CCcc---e----ecccccceeeeCCCC-cEEEEec-CCeEEEEchHHhhhhcc
Confidence            56777777677777899999962    1111   0    111123345578866 6666655 57999999998877665


Q ss_pred             cccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC-CeeEEEEecC----CCcEEEEEEcCCCCEEEEEe-
Q psy17682        204 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT-GEIMIQIECH----PDIVYSASWNWDGSKLLTTC-  277 (490)
Q Consensus       204 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-  277 (490)
                      ..        ....|.-=.|-...  .|+-.+ +..|+-|++.. ..++..+..|    ...|..-..+++.+.++..+ 
T Consensus       102 ~~--------~~e~VvfWkWis~~--~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI  170 (494)
T 1bpo_A          102 HT--------MTDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI  170 (494)
T ss_dssp             EE--------CSSCCCEEEEEETT--EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEE
T ss_pred             ee--------cCCCceEEEecCCC--eEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEee
Confidence            43        34567677777664  455554 46899999974 3566666643    45677777888888776544 


Q ss_pred             ------CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC---CcEEEEEeCCCceeEEEEecCCCC---CCCe--EEE
Q psy17682        278 ------KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS---GLIFTTGFSKMSERQYSLRAPDHL---DEPI--VMV  343 (490)
Q Consensus       278 ------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~---~~~l~~~~~~~~~~~i~iwd~~~~---~~~~--~~~  343 (490)
                            -.|.+.+|..+.+. .+.+.+|... ...+....+   ..+++.+......+.++|.++...   ..+.  ...
T Consensus       171 ~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~-F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~v  248 (494)
T 1bpo_A          171 SAQQNRVVGAMQLYSVDRKV-SQPIEGHAAS-FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAV  248 (494)
T ss_dssp             EEETTEEEEEEEEEESTTCC-EEEECCSEEE-EEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEE
T ss_pred             cccCCcccceEEEeeccccc-cchheeeeee-eEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceee
Confidence                  24678999987553 3455566532 222222211   235555553333478999888643   1111  111


Q ss_pred             ec--cC---CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682        344 EL--DT---SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF  384 (490)
Q Consensus       344 ~~--~~---~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~  384 (490)
                      ..  ..   ..--.++..|+.-..+|+ -+.-|.|.+||+.++..+
T Consensus       249 dv~fppe~~~DFPvamqvs~kygviyv-iTK~G~i~lyDleTgt~i  293 (494)
T 1bpo_A          249 DVFFPPEAQNDFPVAMQISEKHDVVFL-ITKYGYIHLYDLETGTCI  293 (494)
T ss_dssp             ECCCCTTSTTCCEEEEEEETTTTEEEE-EETTSEEEEEETTTCCEE
T ss_pred             eeeCCcccccCceeEEEecccCCEEEE-EecCceEEEEecccceee
Confidence            11  11   122456777887777754 567899999999999843

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=96.67  E-value=0.38  Score=44.09  Aligned_cols=259  Identities=14%  Similarity=0.120  Sum_probs=127.5

Q ss_pred             ecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEe
Q psy17682         39 DLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITI  118 (490)
Q Consensus        39 ~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  118 (490)
                      .+...-..-..|+|.|++ .++++--..|.|++++..++...                ....+.. -..........+++
T Consensus        26 ~va~gL~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~----------------~v~~~~~-v~~~g~~GllGia~   87 (347)
T 3das_A           26 TVATGLNSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKT----------------ELGEVPG-VSPSGEGGLLGIAL   87 (347)
T ss_dssp             EEECCCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEE----------------EEEECTT-CCCBTTBSEEEEEE
T ss_pred             EeecCCCCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEe----------------eecccCc-eeecCCCCceeeEe
Confidence            444556677899999999 77776655899998876554310                0000000 00111224567899


Q ss_pred             ccccc-cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceee----cccCCeeEEEECCCCCCEEEEEeC-------
Q psy17682        119 SEDYV-KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVG----GHKGPVLDIAWSPHDDNVIASGSE-------  186 (490)
Q Consensus       119 s~~~~-~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~----~h~~~V~~~~~~p~~~~~l~s~~~-------  186 (490)
                      +|++. ...+-+..+....+.|.-+.+........+.......+.    +....-..|.|.|+| .+.++.+.       
T Consensus        88 ~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG-~Lyvt~Gd~~~~~~~  166 (347)
T 3das_A           88 SPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK-MLYAGTGESGDTGLS  166 (347)
T ss_dssp             CTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTS-CEEEECBCTTCGGGT
T ss_pred             ccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCC-CEEEEECCCCCCccc
Confidence            98753 122222223345566776766531111011111111111    112235679999998 56665432       


Q ss_pred             ------CCcEEEEECCCCCcccc--cccceeeecccccCEEEEEEeeCCCCEEEEE-eCCCcEEEEECCCCe--------
Q psy17682        187 ------DCVVKVWQIPDGGISRT--LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTA-GSDNNVAIWNVGTGE--------  249 (490)
Q Consensus       187 ------dg~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-~~dg~v~iwd~~~~~--------  249 (490)
                            .|.|.-.+.. ++....  +........+|. ....++|+|++. ++++= +.|+.-.|--+..+.        
T Consensus       167 qd~~~~~G~IlRi~~d-G~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~  243 (347)
T 3das_A          167 QDRKSLGGKILRMTPD-GEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAE  243 (347)
T ss_dssp             TCTTCSTTCEEEECTT-SSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCC
T ss_pred             cCCCCCCCEEEEEeCC-CCccCCCCCCCCeEEeeCCC-CcceEEECCCCC-EEEEecCCCCCceeeEEcCCCEecCCccc
Confidence                  2444444432 221000  000011122343 456899999875 44332 223222222222221        


Q ss_pred             ----------eEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee---eeeeecCCCceeEEEEeCCCcEE
Q psy17682        250 ----------IMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIE---EEAVCHEGSKATRAIYLKSGLIF  316 (490)
Q Consensus       250 ----------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~s~~~~~l  316 (490)
                                ++..+..+......++|. ++..++..-..+.|....+......   ..+.......+..++..|||.++
T Consensus       244 g~~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~ly  322 (347)
T 3das_A          244 GKGGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLW  322 (347)
T ss_dssp             SSCCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEE
T ss_pred             CCCCCccccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEE
Confidence                      233333222356677776 4566666556666766666544321   11211122358899999999877


Q ss_pred             EEEe
Q psy17682        317 TTGF  320 (490)
Q Consensus       317 ~~~~  320 (490)
                      ++..
T Consensus       323 v~td  326 (347)
T 3das_A          323 LVTS  326 (347)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            7654

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=96.62  E-value=0.13  Score=46.36  Aligned_cols=190  Identities=10%  Similarity=0.068  Sum_probs=93.5

Q ss_pred             CEEEEEeCC-----CcEEEEECCCCC---cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC-----CcEEEEEC
Q psy17682        179 NVIASGSED-----CVVKVWQIPDGG---ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-----NNVAIWNV  245 (490)
Q Consensus       179 ~~l~s~~~d-----g~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~v~iwd~  245 (490)
                      .+++.|+.+     ..+.+||..+++   -... ..    +.........+..  ++ .+++.|+.+     ..+.+||+
T Consensus        64 ~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~-~~----~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~d~  135 (301)
T 2vpj_A           64 RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSV-AP----MNVRRGLAGATTL--GD-MIYVSGGFDGSRRHTSMERYDP  135 (301)
T ss_dssp             EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEE-CC----CSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCEEEEEET
T ss_pred             EEEEEcCCCCCccCceEEEEECCCCCCCeeEEC-CC----CCCCccceeEEEE--CC-EEEEEcccCCCcccceEEEEcC
Confidence            566666654     468899987765   2221 11    1111111122222  44 477777654     35889998


Q ss_pred             CCCeeEE--EEecCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEE
Q psy17682        246 GTGEIMI--QIECHPDIVYSASWNWDGSKLLTTCKD-----KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTT  318 (490)
Q Consensus       246 ~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~  318 (490)
                      .+.+-..  .+.........+.+  +++.++.|+.+     ..+.+||+.+.+-...-..... .....+..-++++++.
T Consensus       136 ~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~i~v~  212 (301)
T 2vpj_A          136 NIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATK-RSGAGVALLNDHIYVV  212 (301)
T ss_dssp             TTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEE
T ss_pred             CCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcc-cccceEEEECCEEEEE
Confidence            8765322  22211111222222  57777777654     4589999987654322111111 1111222236777777


Q ss_pred             EeCCCc--eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC-----CeEEEEEecCCC
Q psy17682        319 GFSKMS--ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD-----SVIRYFEITAEP  382 (490)
Q Consensus       319 ~~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d-----g~i~iwd~~~~~  382 (490)
                      |+.+..  ...+.+||+.+..- ...........-..++. -+++ |++.|+.+     ..+.+||..+.+
T Consensus       213 GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~-~~~~-i~v~GG~~~~~~~~~v~~yd~~~~~  280 (301)
T 2vpj_A          213 GGFDGTAHLSSVEAYNIRTDSW-TTVTSMTTPRCYVGATV-LRGR-LYAIAGYDGNSLLSSIECYDPIIDS  280 (301)
T ss_dssp             CCBCSSSBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEE-ETTE-EEEECCBCSSSBEEEEEEEETTTTE
T ss_pred             eCCCCCcccceEEEEeCCCCcE-EECCCCCCcccceeEEE-ECCE-EEEEcCcCCCcccccEEEEcCCCCe
Confidence            763321  35688899876431 11111111111112222 2444 44666654     357778877653

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=96.50  E-value=0.22  Score=44.77  Aligned_cols=150  Identities=12%  Similarity=0.104  Sum_probs=74.9

Q ss_pred             CCCCEEEEEeCC-----CcEEEEECCCCeeEEE--EecCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCcee
Q psy17682        226 TAQNVLLTAGSD-----NNVAIWNVGTGEIMIQ--IECHPDIVYSASWNWDGSKLLTTCKDK-----KMRIINPRTGAIE  293 (490)
Q Consensus       226 ~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~  293 (490)
                      ++ .+++.|+.+     ..+.+||..+.+-...  +.........+.+  +++.++.|+.++     .+.+||+.+.+-.
T Consensus        61 ~~-~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~  137 (302)
T 2xn4_A           61 AG-LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWF  137 (302)
T ss_dssp             TT-EEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred             CC-EEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEe
Confidence            44 477777754     3588999887653222  1111111222222  567777777553     5888998876533


Q ss_pred             eeeeecCCCceeEEEEeCCCcEEEEEeCCCc----eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecC
Q psy17682        294 EEAVCHEGSKATRAIYLKSGLIFTTGFSKMS----ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKG  369 (490)
Q Consensus       294 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~----~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~  369 (490)
                      ..-..... .....+..-++++++.|+.+..    ...+.+||+.+..-. ..........-..++.. ++ .|++.|+.
T Consensus       138 ~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~-~~-~iyv~GG~  213 (302)
T 2xn4_A          138 HVAPMNTR-RSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWT-YIAEMSTRRSGAGVGVL-NN-LLYAVGGH  213 (302)
T ss_dssp             EECCCSSC-CBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEE-EECCCSSCCBSCEEEEE-TT-EEEEECCB
T ss_pred             ecCCCCCc-ccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE-ECCCCccccccccEEEE-CC-EEEEECCC
Confidence            22111111 1111122236777777753221    345788888764311 11111111111122221 34 45567765


Q ss_pred             C-----CeEEEEEecCCC
Q psy17682        370 D-----SVIRYFEITAEP  382 (490)
Q Consensus       370 d-----g~i~iwd~~~~~  382 (490)
                      +     ..+.+||..+.+
T Consensus       214 ~~~~~~~~~~~yd~~~~~  231 (302)
T 2xn4_A          214 DGPLVRKSVEVYDPTTNA  231 (302)
T ss_dssp             SSSSBCCCEEEEETTTTE
T ss_pred             CCCcccceEEEEeCCCCC
Confidence            4     368889988764

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=96.40  E-value=0.3  Score=44.23  Aligned_cols=188  Identities=8%  Similarity=0.037  Sum_probs=89.2

Q ss_pred             EEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC-----C------CcEEEEECCCC
Q psy17682        180 VIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS-----D------NNVAIWNVGTG  248 (490)
Q Consensus       180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-----d------g~v~iwd~~~~  248 (490)
                      +++.|+  ..+.+||..+++-.. ..     +.....+........++ .+++.|+.     .      ..+.+||..+.
T Consensus         7 l~~~GG--~~~~~yd~~~~~W~~-~~-----~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~   77 (315)
T 4asc_A            7 IFMISE--EGAVAYDPAANECYC-AS-----LSSQVPKNHVSLVTKEN-QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS   77 (315)
T ss_dssp             EEEEET--TEEEEEETTTTEEEE-EE-----CCCCSCSSEEEEECTTC-CEEEEEEEEECSSCSSSCEEEEEEEEETTTT
T ss_pred             EEEEcC--CceEEECCCCCeEec-CC-----CCCCCCccceEEEEECC-EEEEEcCcccCCCCCccccccceEEecCCCC
Confidence            455555  468899987765321 11     11111122222223355 47788873     1      12778898876


Q ss_pred             eeEEEEecCCCcE--EEEEEcCCCCEEEEEeCC--------CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEE
Q psy17682        249 EIMIQIECHPDIV--YSASWNWDGSKLLTTCKD--------KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTT  318 (490)
Q Consensus       249 ~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~  318 (490)
                      +-. .+.....+-  .+++.. +++.++.|+.+        ..+.+||..+.+-...-..... .....+...++++++.
T Consensus        78 ~W~-~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~  154 (315)
T 4asc_A           78 EWL-GMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYV-VYGHTVLSHMDLVYVI  154 (315)
T ss_dssp             EEE-ECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSC-CBSCEEEEETTEEEEE
T ss_pred             eEE-ECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCc-ccceeEEEECCEEEEE
Confidence            532 222111111  112222 56677777632        4589999987653221111111 1222223346777777


Q ss_pred             EeC-CC--ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC-----eEEEEEecCCC
Q psy17682        319 GFS-KM--SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS-----VIRYFEITAEP  382 (490)
Q Consensus       319 ~~~-~~--~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg-----~i~iwd~~~~~  382 (490)
                      |+. ..  ....+.+||+.+..-. ..........-..++. -++ .|++.|+.++     .+.+||..+.+
T Consensus       155 GG~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~  223 (315)
T 4asc_A          155 GGKGSDRKCLNKMCVYDPKKFEWK-ELAPMQTARSLFGATV-HDG-RIIVAAGVTDTGLTSSAEVYSITDNK  223 (315)
T ss_dssp             CCBCTTSCBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEE-ETT-EEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred             eCCCCCCcccceEEEEeCCCCeEE-ECCCCCCchhceEEEE-ECC-EEEEEeccCCCCccceEEEEECCCCe
Confidence            763 11  1356888888764310 1111111111112222 244 4456666543     57788887763

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=96.40  E-value=0.14  Score=43.16  Aligned_cols=183  Identities=10%  Similarity=-0.000  Sum_probs=98.5

Q ss_pred             CEEEEEeCCCcEEEEECCCCe------eEEEEec-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee-----eee
Q psy17682        229 NVLLTAGSDNNVAIWNVGTGE------IMIQIEC-HPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIE-----EEA  296 (490)
Q Consensus       229 ~~l~s~~~dg~v~iwd~~~~~------~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-----~~~  296 (490)
                      .+|+....| +++.=...++.      ...++-. .=..+..++|+|+|.+.++  .+|.++-.+..+....     .+.
T Consensus         5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~   81 (236)
T 1tl2_A            5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKK   81 (236)
T ss_dssp             CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEE
T ss_pred             eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccE
Confidence            366777777 65554443332      1222221 1246779999999987777  6788888887553211     111


Q ss_pred             eecCC-CceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe-----EEEeccCCCceeeeeecCCCCeEEEEecCC
Q psy17682        297 VCHEG-SKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI-----VMVELDTSNGVMFPLYDPDTNLVYLCGKGD  370 (490)
Q Consensus       297 ~~~~~-~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~-----~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d  370 (490)
                      .+..+ .....+.|.|+|.+.++ +    ++.|+-++..+.....     .......-..+..+.|.|+|.+. +..  |
T Consensus        82 IG~~Gw~~F~a~~fD~~G~LYav-~----dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Ly-av~--d  153 (236)
T 1tl2_A           82 IGNGGWNQFQFLFFDPNGYLYAV-S----KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLY-AVH--G  153 (236)
T ss_dssp             EECSCGGGCSEEEECTTSCEEEE-E----TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEE-EEE--T
T ss_pred             ecccccccceEEEECCCCCEEEe-C----CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEE-EEe--C
Confidence            11111 11478899999999888 4    5788777753322111     11110111357899999999876 444  6


Q ss_pred             CeEEEEEecCCC--CeeEEeeeee--CCCceeeEEEeeCceeEEeecceeEEEEecCC
Q psy17682        371 SVIRYFEITAEP--PFVHYINTFQ--TPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNS  424 (490)
Q Consensus       371 g~i~iwd~~~~~--~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~  424 (490)
                      +.++-....++.  ........+.  .-...+.+.|.|++.+.+..  ..++|.....
T Consensus       154 g~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~Y~~~~p  209 (236)
T 1tl2_A          154 QQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKFYEDYPP  209 (236)
T ss_dssp             TEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEEEEESCC
T ss_pred             CcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCeEEecCCc
Confidence            764432222111  0000011111  11234557788888776665  4467766443

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=96.28  E-value=0.17  Score=42.66  Aligned_cols=185  Identities=9%  Similarity=0.052  Sum_probs=96.2

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceeeeccc--ccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee------
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYH--QRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI------  250 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~------  250 (490)
                      .+|+...+| +++.=....+.. ..+......+ ++  =..+..++|+|++. +.++  .+|.+.-.+..+.+.      
T Consensus         5 ~~l~~v~~d-~~y~G~~P~~~~-~~~~~~a~~i-G~~gw~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~~~W~~s   78 (236)
T 1tl2_A            5 SMLRGVYQD-KFYQGTYPQNKN-DNWLARATLI-GKGGWSNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDNDNWMGR   78 (236)
T ss_dssp             CCEEEEETT-EEEEESCCCSTT-CCHHHHSEEE-ESSSCTTCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTCCHHHH
T ss_pred             eEEEEEeCC-cEEecCCCCCcc-cchhhhcccc-CccccccceeEEECCCcc-EEEE--eCCeEEEECCCCCCccccccc
Confidence            677777777 655544444332 1110011111 12  23677999999884 5555  667777666544211      


Q ss_pred             EEEEec-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceee-----eeeec-CCCceeEEEEeCCCcEEEEEeCCC
Q psy17682        251 MIQIEC-HPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEE-----EAVCH-EGSKATRAIYLKSGLIFTTGFSKM  323 (490)
Q Consensus       251 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-----~~~~~-~~~~~~~~~~s~~~~~l~~~~~~~  323 (490)
                      -..+-. .-....++.|.|+|.+.++  .||.|+-++-.+.....     +..+. .-..+..+.+.|+|.+.++..   
T Consensus        79 ~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~d---  153 (236)
T 1tl2_A           79 AKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVHG---  153 (236)
T ss_dssp             CEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEET---
T ss_pred             ccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEeC---
Confidence            111210 0111468899999998887  56999888864322111     11111 112378999999999988772   


Q ss_pred             ceeEEEEecCCCCCCC-----eEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        324 SERQYSLRAPDHLDEP-----IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       324 ~~~~i~iwd~~~~~~~-----~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                        +.++-+........     ........-.....+.|++++....+.   ++  ++|.....
T Consensus       154 --g~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~---~g--~~Y~~~~p  209 (236)
T 1tl2_A          154 --QQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ---GG--KFYEDYPP  209 (236)
T ss_dssp             --TEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE---TT--EEEEESCC
T ss_pred             --CcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe---CC--eEEecCCc
Confidence              23332222211100     011111112234556789998877443   66  45555443

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=96.25  E-value=0.38  Score=43.92  Aligned_cols=192  Identities=9%  Similarity=0.011  Sum_probs=104.5

Q ss_pred             CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEE--eeCCCCEEEEE-eCCCcEEEEECCCCeeEEEEe
Q psy17682        179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLW--HPTAQNVLLTA-GSDNNVAIWNVGTGEIMIQIE  255 (490)
Q Consensus       179 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~  255 (490)
                      .+++.++.||.|.-.|..+|+....+...      ...++....-  .+.+...++.. ..||.|..++..+|.....+.
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~------~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~   84 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPE------NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLS   84 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGG------GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEE
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCC------ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeec
Confidence            47888999999999999999887765432      0011111100  01122233333 579999999998886554443


Q ss_pred             c----CCCcEEE---EEE-c----CCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCc------eeEEEEe-----CC
Q psy17682        256 C----HPDIVYS---ASW-N----WDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSK------ATRAIYL-----KS  312 (490)
Q Consensus       256 ~----~~~~v~~---~~~-~----~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~------~~~~~~s-----~~  312 (490)
                      .    ...++..   ... .    ..+..+++|+.+|.+...|+++|+.+.++.......      ..+....     ..
T Consensus        85 ~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~  164 (339)
T 2be1_A           85 IRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQEC  164 (339)
T ss_dssp             HHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------
T ss_pred             cccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccC
Confidence            1    2222221   000 0    135678899999999999999999998886321100      0111110     11


Q ss_pred             CcEEEEEeCCCceeEEEEecCCCCCCCeE--EEeccCCCc---e-eeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682        313 GLIFTTGFSKMSERQYSLRAPDHLDEPIV--MVELDTSNG---V-MFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP  383 (490)
Q Consensus       313 ~~~l~~~~~~~~~~~i~iwd~~~~~~~~~--~~~~~~~~~---i-~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~  383 (490)
                      +..+..+.   .+..+.+.+ +++. ...  .........   + .....+.|+.++ + ++.||.|.-+|..+++.
T Consensus       165 ~~~v~ig~---~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~-~-~~~dg~v~A~d~~~G~~  234 (339)
T 2be1_A          165 ENMIVIGK---TIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCI-A-PFRDKSLLASDLDFRIA  234 (339)
T ss_dssp             CCEEEEEE---EEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCE-E-EETTTEEEEECSTTCCE
T ss_pred             CCeEEEec---ceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEE-E-ECCCCEEEEEECCCCcE
Confidence            34455555   467777766 3332 111  111111000   0 011123456665 3 67899999999888873

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=96.25  E-value=0.28  Score=44.20  Aligned_cols=189  Identities=10%  Similarity=0.042  Sum_probs=92.2

Q ss_pred             CEEEEEeCC----CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC------CcEEEEECCCC
Q psy17682        179 NVIASGSED----CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD------NNVAIWNVGTG  248 (490)
Q Consensus       179 ~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d------g~v~iwd~~~~  248 (490)
                      .+++.|+.+    ..+.+||..+++-...-.     +.........+.+  ++ .+++.|+.+      ..+.+||..+.
T Consensus        57 ~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~-----~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~d~~~~  128 (306)
T 3ii7_A           57 VVYILGGSQLFPIKRMDCYNVVKDSWYSKLG-----PPTPRDSLAACAA--EG-KIYTSGGSEVGNSALYLFECYDTRTE  128 (306)
T ss_dssp             EEEEECCBSSSBCCEEEEEETTTTEEEEEEC-----CSSCCBSCEEEEE--TT-EEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred             EEEEEeCCCCCCcceEEEEeCCCCeEEECCC-----CCccccceeEEEE--CC-EEEEECCCCCCCcEeeeEEEEeCCCC
Confidence            566666654    568888987664322111     1111111122222  44 477777765      46889999877


Q ss_pred             eeEEE--EecCCCcEEEEEEcCCCCEEEEEeC---------CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEE
Q psy17682        249 EIMIQ--IECHPDIVYSASWNWDGSKLLTTCK---------DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFT  317 (490)
Q Consensus       249 ~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~  317 (490)
                      +-...  +.........+.+  ++++++.|+.         -..+.+||+.+.+-...-..... .....+..-++++++
T Consensus       129 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~i~v  205 (306)
T 3ii7_A          129 SWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEA-RKNHGLVFVKDKIFA  205 (306)
T ss_dssp             EEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEE
T ss_pred             ceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccch-hhcceEEEECCEEEE
Confidence            53222  1111111122222  5667777653         34588999987753322111111 111122222677777


Q ss_pred             EEeCCCc--eeEEEEecCCCCCCCeEEEeccCCC-ceeeeeecCCCCeEEEEecCC-----CeEEEEEecCCC
Q psy17682        318 TGFSKMS--ERQYSLRAPDHLDEPIVMVELDTSN-GVMFPLYDPDTNLVYLCGKGD-----SVIRYFEITAEP  382 (490)
Q Consensus       318 ~~~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~~~g~~d-----g~i~iwd~~~~~  382 (490)
                      .|+.+..  ...+.+||+.+..- .......... ....+.+  ++ .|++.|+.+     ..+.+||..+.+
T Consensus       206 ~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~~~yd~~~~~  274 (306)
T 3ii7_A          206 VGGQNGLGGLDNVEYYDIKLNEW-KMVSPMPWKGVTVKCAAV--GS-IVYVLAGFQGVGRLGHILEYNTETDK  274 (306)
T ss_dssp             ECCEETTEEBCCEEEEETTTTEE-EECCCCSCCBSCCEEEEE--TT-EEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred             EeCCCCCCCCceEEEeeCCCCcE-EECCCCCCCccceeEEEE--CC-EEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence            7753211  24578888876431 1111111111 1122222  34 455677644     467888887764

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=96.20  E-value=0.39  Score=44.92  Aligned_cols=117  Identities=10%  Similarity=0.167  Sum_probs=78.7

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc-------cccceeeecc----cccCEEEEEEeeCCCC--EEEE
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT-------LTEPVVDLLY----HQRRVGLVLWHPTAQN--VLLT  233 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~-------~~~~~~~~~~----~~~~v~~~~~~p~~~~--~l~s  233 (490)
                      .|..+..+|+| ++||..+. ..|.|-.+..+.....       +......+..    ...+|..+.|||-+.+  .|++
T Consensus        67 ~i~qlvlSpsG-~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV  144 (452)
T 3pbp_A           67 DTFHVISSTSG-DLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV  144 (452)
T ss_dssp             TTCEEEECTTS-SEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred             ceeEEEECCCC-CEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence            57889999998 78888764 5899999984431111       1100011111    2567999999997533  8899


Q ss_pred             EeCCCcEEEEECCCC--eeEEEEe---------cCCCcEEEEEEcCCCCEEEEEe--CCCeEEEEe
Q psy17682        234 AGSDNNVAIWNVGTG--EIMIQIE---------CHPDIVYSASWNWDGSKLLTTC--KDKKMRIIN  286 (490)
Q Consensus       234 ~~~dg~v~iwd~~~~--~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd  286 (490)
                      -..|+.|++||+...  ++. .++         .....|.+++|.+++-.|...+  .+|.|+-.-
T Consensus       145 LtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlc  209 (452)
T 3pbp_A          145 LKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFY  209 (452)
T ss_dssp             EETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred             EecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence            999999999999852  233 332         2235688999999876666655  778877653

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=96.18  E-value=1  Score=48.99  Aligned_cols=234  Identities=12%  Similarity=0.079  Sum_probs=135.3

Q ss_pred             cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc
Q psy17682        124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT  203 (490)
Q Consensus       124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~  203 (490)
                      ++|.++.-..+....+.|.++..    ....  ..+.     -..-+.-.+|.. +.+|.=. ..++.|+|+++...++.
T Consensus        35 Dkyicvre~~~~~~~vvIidl~~----~~~~--~rrp-----i~AdsAIMnP~~-~iiALra-g~~lQiFnl~~k~klks  101 (1630)
T 1xi4_A           35 DKFICIREKVGEQAQVVIIDMND----PSNP--IRRP-----ISADSAIMNPAS-KVIALKA-GKTLQIFNIEMKSKMKA  101 (1630)
T ss_pred             CceEEEEecCCCCceEEEEECCC----CCCc--cccc-----ccchhhccCCCc-ceEEEec-CCeEEEeehHHhhhhcc
Confidence            56677766666777899999872    2111  0011     112233467765 5666554 67999999988877665


Q ss_pred             cccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC-CeeEEEEecC----CCcEEEEEEcCCCCEEEEEe-
Q psy17682        204 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT-GEIMIQIECH----PDIVYSASWNWDGSKLLTTC-  277 (490)
Q Consensus       204 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-  277 (490)
                      ..        ....|.-=.|-...  .|+-.+ +..|.-|++.. ..++..+..|    ...|..-..+++.+.++..+ 
T Consensus       102 ~~--------~~e~VvfWkWis~~--~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi  170 (1630)
T 1xi4_A          102 HT--------MTDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI  170 (1630)
T ss_pred             cc--------cCCCceEEEecCCC--eeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEee
Confidence            43        34456666776554  455443 35799999964 2444444433    45677777788888766544 


Q ss_pred             ------CCCeEEEEeCCCCceeeeeeecCCCceeEEEEe---CCCcEEEEEeCCCceeEEEEecCCCC---CCCeEEE--
Q psy17682        278 ------KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYL---KSGLIFTTGFSKMSERQYSLRAPDHL---DEPIVMV--  343 (490)
Q Consensus       278 ------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s---~~~~~l~~~~~~~~~~~i~iwd~~~~---~~~~~~~--  343 (490)
                            -.|.+.+|++..+. .+.+.+|... .......   +...+++.+......+.++|-++...   ..+....  
T Consensus       171 ~~~~~~v~G~mQLyS~er~~-sQ~iegha~~-F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~  248 (1630)
T 1xi4_A          171 SAQQNRVVGAMQLYSVDRKV-SQPIEGHAAS-FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAV  248 (1630)
T ss_pred             ccCCCcccceeeeeeccccc-chhhhHhHhh-hheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccc
Confidence                  34788899887543 3344455543 2222221   11335554442223467888887543   1111111  


Q ss_pred             --eccC---CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682        344 --ELDT---SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF  384 (490)
Q Consensus       344 --~~~~---~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~  384 (490)
                        .+..   ..-..++..|+.-..++ .-+.-|.|.+||+.++..+
T Consensus       249 ~~~~~~~~~~Dfpv~~~vs~k~g~iy-~itk~G~~~~~d~~t~~~i  293 (1630)
T 1xi4_A          249 DVFFPPEAQNDFPVAMQISEKHDVVF-LITKYGYIHLYDLETGTCI  293 (1630)
T ss_pred             cccCCcccccCcceEEEeccccCEEE-EEecCceEEEEecccchhh
Confidence              0111   11134556677666664 4567899999999998743

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=96.17  E-value=0.97  Score=43.32  Aligned_cols=164  Identities=13%  Similarity=0.057  Sum_probs=90.6

Q ss_pred             cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee--EEEEec------CCCcEEEEEEcCC---CCEEEEEe-C-----
Q psy17682        216 RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI--MIQIEC------HPDIVYSASWNWD---GSKLLTTC-K-----  278 (490)
Q Consensus       216 ~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~--~~~~~~------~~~~v~~~~~~~~---~~~l~~~~-~-----  278 (490)
                      ...+.|+|.|+|+ ++++-...+.|++++..+++.  +..+..      .......|+|+|+   +..|..+. .     
T Consensus        27 ~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~  105 (454)
T 1cru_A           27 NKPHALLWGPDNQ-IWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS  105 (454)
T ss_dssp             SSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred             CCceEEEEcCCCc-EEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence            3567999999995 655543334788888655543  222221      2456789999995   44444433 2     


Q ss_pred             -------CCeEEEEeCCCC--c-----eee-eeeecCCCceeEEEEeCCCcEEEEEeCCCc-------------------
Q psy17682        279 -------DKKMRIINPRTG--A-----IEE-EAVCHEGSKATRAIYLKSGLIFTTGFSKMS-------------------  324 (490)
Q Consensus       279 -------dg~i~iwd~~~~--~-----~~~-~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~-------------------  324 (490)
                             ...|.-++....  .     .+. .+..........++|.|||.++++.++.+.                   
T Consensus       106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~  185 (454)
T 1cru_A          106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQ  185 (454)
T ss_dssp             --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHH
T ss_pred             CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCccccccccccccccccc
Confidence                   234666655322  1     111 111111123789999999987776543211                   


Q ss_pred             ----------eeEEEEecCCCCC---CC------eEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        325 ----------ERQYSLRAPDHLD---EP------IVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       325 ----------~~~i~iwd~~~~~---~~------~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                                .+.|.-.+.+..-   .+      ..+....+ .....++|+|+|++.++--+.++.-.|..+..+
T Consensus       186 ~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~-RNp~gla~dp~G~L~~~d~g~~~~dein~i~~G  260 (454)
T 1cru_A          186 ELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGH-RNPQGLAFTPNGKLLQSEQGPNSDDEINLIVKG  260 (454)
T ss_dssp             HHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCC-SEEEEEEECTTSCEEEEEECSSSCEEEEECCTT
T ss_pred             cccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECC-CCcceEEECCCCCEEEEecCCCCCeEEEEecCC
Confidence                      2444444554320   01      11222233 557889999988766444455655566666544

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=95.99  E-value=1.7  Score=44.72  Aligned_cols=230  Identities=9%  Similarity=0.010  Sum_probs=126.6

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN  244 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd  244 (490)
                      ...|.+|.-..+|  ++-.|..+| +..||-..-   ..+...   .......|.++.-..++  .|..|+.+| +..||
T Consensus        21 ~n~V~~I~qD~~G--~lWigT~~G-L~ryDG~~~---~~~~~~---~~~~~~~i~~i~~d~~g--~lWigT~~G-l~~yd   88 (758)
T 3ott_A           21 ASVVSCFLQDSEG--LIWIGSNKG-LFSYDGYST---QQHFTY---GENNNTRIYCGVIIDNT--YLYMGTDNG-ILVYN   88 (758)
T ss_dssp             CCCEEEEEECTTS--CEEEEESSC-EEEECSSCE---EECSCT---TSTTSSCEEEEEEETTT--EEEEEETTE-EEEEE
T ss_pred             cceEEEEEECCCC--CEEEEECCC-ccccCCCce---EEEEcc---CCCCCceEEEEEEcCCC--cEEEEeCCC-eEEEe
Confidence            4679999988877  455566776 566763221   111110   00124568888777665  566676655 78899


Q ss_pred             CCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee----ecCCCceeEEEEeCCCcEEEEEe
Q psy17682        245 VGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV----CHEGSKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       245 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~s~~~~~l~~~~  320 (490)
                      ..+.+...........|.++.. .++ .|..++.+ .+..||..+++.. .+.    ......+.++....+|.+.+. +
T Consensus        89 ~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWig-t  163 (758)
T 3ott_A           89 YRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYVG-T  163 (758)
T ss_dssp             TTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEEE-E
T ss_pred             CCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEEE-e
Confidence            8876432211112335777654 344 56666665 6888998766533 221    112234777777778877664 3


Q ss_pred             CCCceeEEEEecCCCCCCCeEEEeccC-----CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCC
Q psy17682        321 SKMSERQYSLRAPDHLDEPIVMVELDT-----SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPD  395 (490)
Q Consensus       321 ~~~~~~~i~iwd~~~~~~~~~~~~~~~-----~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~  395 (490)
                         .. -+..++..+..  ........     ...|.++...+++..|++ |+ ++-+..++..+++ + ....... ..
T Consensus       164 ---~~-Gl~~~~~~~~~--~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWi-gt-~~Gl~~~~~~~~~-~-~~~~~l~-~~  232 (758)
T 3ott_A          164 ---YN-GLCRYIPSNGK--FEGIPLPVHSSQSNLFVNSLLEDTTRQCVWI-GT-EGYLFQYFPSTGQ-I-KQTEAFH-NN  232 (758)
T ss_dssp             ---TT-EEEEEETTTTE--EEEECCCCCTTCSSCCEEEEEEETTTTEEEE-EE-EEEEEEEETTTTE-E-EEEEEEE-EE
T ss_pred             ---CC-CHhhCccCCCc--eEEecCCCccccccceeEEEEEECCCCEEEE-EE-CCCCeEEcCCCCe-E-EeccCCC-CC
Confidence               23 36677766432  11111111     123777777777775544 43 3457788876653 2 1221111 23


Q ss_pred             ceeeEEEeeCceeEEeecceeEEEEec
Q psy17682        396 PQRGIGMMPKRGCDVNSCEIGRFFRLN  422 (490)
Q Consensus       396 ~i~~~~~sp~~~~l~~~~~~~~~~~~~  422 (490)
                      .|.++...++|.+.+...+-+.+++..
T Consensus       233 ~i~~i~~d~~g~lWigT~~Gl~~~~~~  259 (758)
T 3ott_A          233 SIKSLALDGNGDLLAGTDNGLYVYHND  259 (758)
T ss_dssp             EEEEEEECTTCCEEEEETTEEEEECCT
T ss_pred             eEEEEEEcCCCCEEEEeCCceeEEecC
Confidence            577787777777666554433344433

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=95.96  E-value=0.99  Score=41.60  Aligned_cols=148  Identities=7%  Similarity=0.017  Sum_probs=79.5

Q ss_pred             cCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeE---EEE----ecCCCcEEEEEEcCC---CCEEEEE-eC------
Q psy17682        216 RRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIM---IQI----ECHPDIVYSASWNWD---GSKLLTT-CK------  278 (490)
Q Consensus       216 ~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~---~~~----~~~~~~v~~~~~~~~---~~~l~~~-~~------  278 (490)
                      .....|+|.|+++. |+++...|.|++++.. ++..   ..+    .........++++|+   +..|... +.      
T Consensus        18 ~~P~~i~~~pdG~~-l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~   95 (353)
T 2g8s_A           18 DHPWALAFLPDNHG-MLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK   95 (353)
T ss_dssp             SSEEEEEECSTTCC-EEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred             CCcEEEEEcCCCCE-EEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence            34689999999842 4555678999999853 3321   111    112346789999995   4444443 32      


Q ss_pred             -CCeEEEEeCCCC--c--eeeee-eec-----CCCceeEEEEeCCCcEEEEEeCCCc----------eeEEEEecCCCCC
Q psy17682        279 -DKKMRIINPRTG--A--IEEEA-VCH-----EGSKATRAIYLKSGLIFTTGFSKMS----------ERQYSLRAPDHLD  337 (490)
Q Consensus       279 -dg~i~iwd~~~~--~--~~~~~-~~~-----~~~~~~~~~~s~~~~~l~~~~~~~~----------~~~i~iwd~~~~~  337 (490)
                       ...|..|+....  .  ....+ ...     .......++|.|+|.++++-++.+.          .+.|.-++.+..-
T Consensus        96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~  175 (353)
T 2g8s_A           96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI  175 (353)
T ss_dssp             EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred             ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence             235666666433  1  11111 110     1112467999999987776543211          2456566655320


Q ss_pred             ---C--------CeEEEeccCCCceeeeeecCCCCeEEEE
Q psy17682        338 ---E--------PIVMVELDTSNGVMFPLYDPDTNLVYLC  366 (490)
Q Consensus       338 ---~--------~~~~~~~~~~~~i~~~~~s~~~~~l~~~  366 (490)
                         .        ...+.... ......++|+|+...|+++
T Consensus       176 p~~npf~~~~~~~~~i~a~G-~rnp~gl~~d~~~g~l~~~  214 (353)
T 2g8s_A          176 PDDNPFIKESGVRAEIWSYG-IRNPQGMAMNPWSNALWLN  214 (353)
T ss_dssp             CTTCTTTTSTTSCTTEEEEC-CSEEEEEEEETTTTEEEEE
T ss_pred             CCCCCCcCCCCCCccEEEEc-CcCccceEEECCCCCEEEE
Confidence               0        11122222 2457889999943344444

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=95.82  E-value=0.75  Score=41.53  Aligned_cols=105  Identities=10%  Similarity=0.005  Sum_probs=55.2

Q ss_pred             CEEEEEeCC--------CcEEEEECCCCeeEE--EEecCCCcEEEEEEcCCCCEEEEEeC-C-----CeEEEEeCCCCce
Q psy17682        229 NVLLTAGSD--------NNVAIWNVGTGEIMI--QIECHPDIVYSASWNWDGSKLLTTCK-D-----KKMRIINPRTGAI  292 (490)
Q Consensus       229 ~~l~s~~~d--------g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----g~i~iwd~~~~~~  292 (490)
                      .+++.|+.+        ..+.+||..+.+-..  .+.........+.  -+++.++.|+. +     ..+.+||+.+.+-
T Consensus       100 ~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W  177 (315)
T 4asc_A          100 SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEW  177 (315)
T ss_dssp             EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEE
T ss_pred             EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeE
Confidence            477777732        458899998765222  1111111112222  35677777775 2     4689999987643


Q ss_pred             eeeeeecCCCceeEEEEeCCCcEEEEEeCCC--ceeEEEEecCCCC
Q psy17682        293 EEEAVCHEGSKATRAIYLKSGLIFTTGFSKM--SERQYSLRAPDHL  336 (490)
Q Consensus       293 ~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~--~~~~i~iwd~~~~  336 (490)
                      ...-..... .....+..-++++++.|+.+.  ....+.+||+.+.
T Consensus       178 ~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~  222 (315)
T 4asc_A          178 KELAPMQTA-RSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDN  222 (315)
T ss_dssp             EECCCCSSC-CBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred             EECCCCCCc-hhceEEEEECCEEEEEeccCCCCccceEEEEECCCC
Confidence            222111111 111122223677777776322  2346888988764

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=95.75  E-value=0.2  Score=44.99  Aligned_cols=190  Identities=13%  Similarity=0.143  Sum_probs=91.3

Q ss_pred             CEEEEEeCC-----CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC-----cEEEEECCCC
Q psy17682        179 NVIASGSED-----CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN-----NVAIWNVGTG  248 (490)
Q Consensus       179 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-----~v~iwd~~~~  248 (490)
                      .+++.|+.+     ..+.+||..+.+-... ..    +.........+.+  ++ .+++.|+.++     .+.+||+.+.
T Consensus        63 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~-~~----~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~~~  134 (302)
T 2xn4_A           63 LVFAVGGFNGSLRVRTVDSYDPVKDQWTSV-AN----MRDRRSTLGAAVL--NG-LLYAVGGFDGSTGLSSVEAYNIKSN  134 (302)
T ss_dssp             EEEEESCBCSSSBCCCEEEEETTTTEEEEE-CC----CSSCCBSCEEEEE--TT-EEEEEEEECSSCEEEEEEEEETTTT
T ss_pred             EEEEEeCcCCCccccceEEECCCCCceeeC-CC----CCccccceEEEEE--CC-EEEEEcCCCCCccCceEEEEeCCCC
Confidence            566666644     3588888876543221 11    1111111122222  44 4777777653     5778898776


Q ss_pred             eeEEE--EecCCCcEEEEEEcCCCCEEEEEeCC-------CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682        249 EIMIQ--IECHPDIVYSASWNWDGSKLLTTCKD-------KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG  319 (490)
Q Consensus       249 ~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~  319 (490)
                      +-...  +.........+.+  +++.++.|+.+       ..+.+||+.+.+-...-..... .....+..-++++++.|
T Consensus       135 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~G  211 (302)
T 2xn4_A          135 EWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR-RSGAGVGVLNNLLYAVG  211 (302)
T ss_dssp             EEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEEC
T ss_pred             eEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc-cccccEEEECCEEEEEC
Confidence            53222  1111111122222  56677776542       4588999987653322111111 11111222367788877


Q ss_pred             eCCCc--eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCC-----eEEEEEecCCC
Q psy17682        320 FSKMS--ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDS-----VIRYFEITAEP  382 (490)
Q Consensus       320 ~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg-----~i~iwd~~~~~  382 (490)
                      +.++.  ...+.+||+.+..- ...........-..++. -+++ |++.|+.++     .+.+||..+.+
T Consensus       212 G~~~~~~~~~~~~yd~~~~~W-~~~~~~~~~r~~~~~~~-~~~~-i~v~GG~~~~~~~~~v~~yd~~~~~  278 (302)
T 2xn4_A          212 GHDGPLVRKSVEVYDPTTNAW-RQVADMNMCRRNAGVCA-VNGL-LYVVGGDDGSCNLASVEYYNPTTDK  278 (302)
T ss_dssp             CBSSSSBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEE-ETTE-EEEECCBCSSSBCCCEEEEETTTTE
T ss_pred             CCCCCcccceEEEEeCCCCCE-eeCCCCCCccccCeEEE-ECCE-EEEECCcCCCcccccEEEEcCCCCe
Confidence            63221  34688899876431 11111111111111222 2444 446676543     47888887764

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=95.66  E-value=1.1  Score=40.49  Aligned_cols=188  Identities=10%  Similarity=0.069  Sum_probs=87.5

Q ss_pred             EEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC----CC-------cEEEEECCCC
Q psy17682        180 VIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS----DN-------NVAIWNVGTG  248 (490)
Q Consensus       180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~----dg-------~v~iwd~~~~  248 (490)
                      +++.|+.  .+..||..+++-.. ..     ...............++ .+++.|+.    ++       .+.+||..+.
T Consensus        18 i~~~GG~--~~~~yd~~~~~W~~-~~-----~~~~~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~   88 (318)
T 2woz_A           18 ILLVNDT--AAVAYDPMENECYL-TA-----LAEQIPRNHSSIVTQQN-QVYVVGGLYVDEENKDQPLQSYFFQLDNVSS   88 (318)
T ss_dssp             EEEECSS--EEEEEETTTTEEEE-EE-----ECTTSCSSEEEEECSSS-CEEEEESSCC-------CCCBEEEEEETTTT
T ss_pred             hhhcccc--ceEEECCCCCceec-cc-----CCccCCccceEEEEECC-EEEEECCcccCccccCCCccccEEEEeCCCC
Confidence            3444443  37888987665322 11     11111111222223444 48888873    12       1778888776


Q ss_pred             eeEEE--EecCCCcEEEEEEcCCCCEEEEEeCC-------CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEE
Q psy17682        249 EIMIQ--IECHPDIVYSASWNWDGSKLLTTCKD-------KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTG  319 (490)
Q Consensus       249 ~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~  319 (490)
                      +-...  +.........+.+  +++.++.|+.+       ..+.+||+.+.+-...-... .......+...++++++.|
T Consensus        89 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~G  165 (318)
T 2woz_A           89 EWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLP-IKVYGHNVISHNGMIYCLG  165 (318)
T ss_dssp             EEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCS-SCEESCEEEEETTEEEEEC
T ss_pred             cEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCC-CcccccEEEEECCEEEEEc
Confidence            53221  1111111122222  56777777754       35889999876533221111 1111112222467777777


Q ss_pred             eCC---CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC-----CeEEEEEecCCC
Q psy17682        320 FSK---MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD-----SVIRYFEITAEP  382 (490)
Q Consensus       320 ~~~---~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d-----g~i~iwd~~~~~  382 (490)
                      +..   .....+.+||+.+..- ...........-..++. -++ .|++.|+.+     ..+.+||+.+.+
T Consensus       166 G~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~yd~~~~~  233 (318)
T 2woz_A          166 GKTDDKKCTNRVFIYNPKKGDW-KDLAPMKTPRSMFGVAI-HKG-KIVIAGGVTEDGLSASVEAFDLKTNK  233 (318)
T ss_dssp             CEESSSCBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEE-ETT-EEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred             CCCCCCCccceEEEEcCCCCEE-EECCCCCCCcccceEEE-ECC-EEEEEcCcCCCCccceEEEEECCCCe
Confidence            521   1134588889876431 11111111111112222 234 444666543     356788887764

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=95.65  E-value=1.7  Score=42.08  Aligned_cols=242  Identities=8%  Similarity=-0.055  Sum_probs=133.3

Q ss_pred             EEEEEeCCCcEEEEECCCCCcccccccce--------------eeecc----cccCEE--EEEEe---eCCCCEEEEEeC
Q psy17682        180 VIASGSEDCVVKVWQIPDGGISRTLTEPV--------------VDLLY----HQRRVG--LVLWH---PTAQNVLLTAGS  236 (490)
Q Consensus       180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--------------~~~~~----~~~~v~--~~~~~---p~~~~~l~s~~~  236 (490)
                      .|.||+..|.|+|+-+.+++.++.+..-.              ..+..    ..+...  .+++.   .||+.+++---.
T Consensus        72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka  151 (638)
T 3sbq_A           72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA  151 (638)
T ss_dssp             EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred             EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence            47788999999999998888776653100              00000    011111  22232   346533444445


Q ss_pred             CCcEEEEECCCCeeEEEEe-cCCCcEEEEEEc--CCCCEEEEEeC-------CCeE------------EEEeCCCCceee
Q psy17682        237 DNNVAIWNVGTGEIMIQIE-CHPDIVYSASWN--WDGSKLLTTCK-------DKKM------------RIINPRTGAIEE  294 (490)
Q Consensus       237 dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~l~~~~~-------dg~i------------~iwd~~~~~~~~  294 (490)
                      +..|...+++..++-..++ .....+..+.+-  |+-.+++.+++       ||..            ...|..+.+...
T Consensus       152 n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~  231 (638)
T 3sbq_A          152 NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAF  231 (638)
T ss_dssp             TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEE
T ss_pred             CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEE
Confidence            6778888988887655544 356678888886  67778888774       3321            112222333322


Q ss_pred             eeeecCCCceeEEEEeCCCcEEEEEeCCC------------ceeEEEEe-------------------------cCCCCC
Q psy17682        295 EAVCHEGSKATRAIYLKSGLIFTTGFSKM------------SERQYSLR-------------------------APDHLD  337 (490)
Q Consensus       295 ~~~~~~~~~~~~~~~s~~~~~l~~~~~~~------------~~~~i~iw-------------------------d~~~~~  337 (490)
                      ++....  ....+...++|.+.++.+...            ....+.++                         |.+...
T Consensus       232 Qv~v~g--nld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~  309 (638)
T 3sbq_A          232 QVIVDG--NLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKD  309 (638)
T ss_dssp             EEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBT
T ss_pred             EEEcCC--ChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcccccc
Confidence            222211  133445566777666554211            11223333                         333200


Q ss_pred             --CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC------C---CeeEEeeeeeCCCceeeEEEeeCc
Q psy17682        338 --EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE------P---PFVHYINTFQTPDPQRGIGMMPKR  406 (490)
Q Consensus       338 --~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~------~---~~~~~~~~~~~~~~i~~~~~sp~~  406 (490)
                        .......+........+..+|||++++++|-.+.++.++|+..-      +   +--........+-.....+|.++|
T Consensus       310 ~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G  389 (638)
T 3sbq_A          310 GKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG  389 (638)
T ss_dssp             TBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS
T ss_pred             ccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC
Confidence              00011111222345677899999999999999999999999841      1   000112223334456889999999


Q ss_pred             eeEEee--cceeEEEEecC
Q psy17682        407 GCDVNS--CEIGRFFRLNN  423 (490)
Q Consensus       407 ~~l~~~--~~~~~~~~~~~  423 (490)
                      ....+-  ++.+--|++..
T Consensus       390 ~aYTtlfidSqvvkWni~~  408 (638)
T 3sbq_A          390 NAYTTLFIDSQVVKWNMEE  408 (638)
T ss_dssp             EEEEEETTTTEEEEEEHHH
T ss_pred             ceEeeeeecceEEEEeccH
Confidence            543332  67778898865

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=95.34  E-value=1.5  Score=40.33  Aligned_cols=104  Identities=13%  Similarity=-0.004  Sum_probs=53.9

Q ss_pred             CCCCEEEEEeC-C---------CcEEEEECCCCeeEEE--Ee-cCCCcEEEEEEcCCCCEEEEEeCC-------------
Q psy17682        226 TAQNVLLTAGS-D---------NNVAIWNVGTGEIMIQ--IE-CHPDIVYSASWNWDGSKLLTTCKD-------------  279 (490)
Q Consensus       226 ~~~~~l~s~~~-d---------g~v~iwd~~~~~~~~~--~~-~~~~~v~~~~~~~~~~~l~~~~~d-------------  279 (490)
                      ++ .+++.|+. +         ..+.+||+.+.+-...  +. ........+.  .++++++.|+.+             
T Consensus        65 ~~-~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~  141 (357)
T 2uvk_A           65 DG-NLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNE  141 (357)
T ss_dssp             TT-EEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHH
T ss_pred             CC-EEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhh
Confidence            44 47777765 2         4688999987653221  11 1111122222  467788888754             


Q ss_pred             --------------------------CeEEEEeCCCCceeeeeeecCCCce-eEEEEeCCCcEEEEEeCCC---ceeEEE
Q psy17682        280 --------------------------KKMRIINPRTGAIEEEAVCHEGSKA-TRAIYLKSGLIFTTGFSKM---SERQYS  329 (490)
Q Consensus       280 --------------------------g~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~l~~~~~~~---~~~~i~  329 (490)
                                                ..+.+||..+.+-...-........ ..++. -++++++.|+...   ....+.
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~  220 (357)
T 2uvk_A          142 AGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVF  220 (357)
T ss_dssp             HTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEE
T ss_pred             cCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceE
Confidence                                      5799999987654332221111112 22222 3667777765211   123466


Q ss_pred             EecC
Q psy17682        330 LRAP  333 (490)
Q Consensus       330 iwd~  333 (490)
                      +||+
T Consensus       221 ~~d~  224 (357)
T 2uvk_A          221 ELDF  224 (357)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            6766

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=94.98  E-value=1  Score=45.96  Aligned_cols=200  Identities=13%  Similarity=0.014  Sum_probs=100.0

Q ss_pred             CEEEEEeCC----CcEEEEECCCCCccccc-ccceeeecccccCEEEEEEee-CCCCEEEEEeCC------CcEEEEECC
Q psy17682        179 NVIASGSED----CVVKVWQIPDGGISRTL-TEPVVDLLYHQRRVGLVLWHP-TAQNVLLTAGSD------NNVAIWNVG  246 (490)
Q Consensus       179 ~~l~s~~~d----g~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~d------g~v~iwd~~  246 (490)
                      .+++.||.+    ..+.+||..+++-...- ..|.......... .+++..+ ++ .+++.||.+      ..+.+||..
T Consensus       399 ~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~-hs~~~~~~~~-~lyv~GG~~~~~~~~~dv~~yd~~  476 (695)
T 2zwa_A          399 DVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMC-HTFTTISRNN-QLLLIGGRKAPHQGLSDNWIFDMK  476 (695)
T ss_dssp             CEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBS-CEEEEETTTT-EEEEECCBSSTTCBCCCCEEEETT
T ss_pred             EEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccc-eEEEEEccCC-EEEEEcCCCCCCCccccEEEEeCC
Confidence            677777643    45888888766532211 1000001101111 2233333 55 477777754      357889988


Q ss_pred             CCeeEEE--EecCCCcEEEEEEcCCCCEEEEEeCCC--eEEEEeCCCCceeeeee---ec-CCCceeEEEEeCC-CcEEE
Q psy17682        247 TGEIMIQ--IECHPDIVYSASWNWDGSKLLTTCKDK--KMRIINPRTGAIEEEAV---CH-EGSKATRAIYLKS-GLIFT  317 (490)
Q Consensus       247 ~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~---~~-~~~~~~~~~~s~~-~~~l~  317 (490)
                      +.+-...  +..... -.+++...+++.++.|+.++  .+.+||..+.+-...-.   .. .......+.+..+ +++++
T Consensus       477 t~~W~~~~~~p~~R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv  555 (695)
T 2zwa_A          477 TREWSMIKSLSHTRF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII  555 (695)
T ss_dssp             TTEEEECCCCSBCCB-SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred             CCcEEECCCCCCCcc-cceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence            7542221  111111 12233324788888887654  69999998765332211   00 1111233555655 77888


Q ss_pred             EEeCCC----ceeEEEEecCCCCCC-----CeEEEecc-CCCceeeeeecCCCCeEEEEecC--------CCeEEEEEec
Q psy17682        318 TGFSKM----SERQYSLRAPDHLDE-----PIVMVELD-TSNGVMFPLYDPDTNLVYLCGKG--------DSVIRYFEIT  379 (490)
Q Consensus       318 ~~~~~~----~~~~i~iwd~~~~~~-----~~~~~~~~-~~~~i~~~~~s~~~~~l~~~g~~--------dg~i~iwd~~  379 (490)
                      .|+...    ....+.+||+.+...     -....... ....-..++...+++ |++.|+.        ...+.+||..
T Consensus       556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~v~~yd~~  634 (695)
T 2zwa_A          556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRK-LLIVGGTSPSGLFDRTNSIISLDPL  634 (695)
T ss_dssp             ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTE-EEEECCBCSSCCCCTTTSEEEEETT
T ss_pred             ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCE-EEEECCccCCCCCCCCCeEEEEECC
Confidence            876421    235788999887651     11111111 111111222222244 4466764        3468899998


Q ss_pred             CCC
Q psy17682        380 AEP  382 (490)
Q Consensus       380 ~~~  382 (490)
                      +.+
T Consensus       635 t~~  637 (695)
T 2zwa_A          635 SET  637 (695)
T ss_dssp             TTE
T ss_pred             CCe
Confidence            764

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=94.96  E-value=2  Score=38.70  Aligned_cols=108  Identities=15%  Similarity=0.112  Sum_probs=55.8

Q ss_pred             CCCCEEEEEeCC-------CcEEEEECCCCeeEEEEecCCCcE--EEEEEcCCCCEEEEEeC------CCeEEEEeCCCC
Q psy17682        226 TAQNVLLTAGSD-------NNVAIWNVGTGEIMIQIECHPDIV--YSASWNWDGSKLLTTCK------DKKMRIINPRTG  290 (490)
Q Consensus       226 ~~~~~l~s~~~d-------g~v~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~  290 (490)
                      ++ .+++.|+.+       ..+.+||+.+.+-.. +.....+.  .+++. .++++++.|+.      -..+.+||+.+.
T Consensus       109 ~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~  185 (318)
T 2woz_A          109 DD-KIYVVAGKDLQTEASLDSVLCYDPVAAKWSE-VKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKG  185 (318)
T ss_dssp             TT-EEEEEEEEBTTTCCEEEEEEEEETTTTEEEE-ECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTT
T ss_pred             CC-EEEEEcCccCCCCcccceEEEEeCCCCCEeE-CCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCC
Confidence            44 477777754       347888988765332 21111111  11222 35677777764      235999999877


Q ss_pred             ceeeeeeecCCCceeEEEEeCCCcEEEEEeCCC--ceeEEEEecCCCCC
Q psy17682        291 AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKM--SERQYSLRAPDHLD  337 (490)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~--~~~~i~iwd~~~~~  337 (490)
                      +-...-..........++. -++++++.|+...  ....+.+||+.+..
T Consensus       186 ~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~  233 (318)
T 2woz_A          186 DWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNK  233 (318)
T ss_dssp             EEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred             EEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence            5332211111111112222 3677777775321  13567889988653

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=94.49  E-value=2.4  Score=43.23  Aligned_cols=152  Identities=16%  Similarity=0.064  Sum_probs=81.1

Q ss_pred             CEEEEEeCC----CcEEEEECCCCeeEEEE-e------cCCCcEEEEEEcC-CCCEEEEEeCC------CeEEEEeCCCC
Q psy17682        229 NVLLTAGSD----NNVAIWNVGTGEIMIQI-E------CHPDIVYSASWNW-DGSKLLTTCKD------KKMRIINPRTG  290 (490)
Q Consensus       229 ~~l~s~~~d----g~v~iwd~~~~~~~~~~-~------~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~iwd~~~~  290 (490)
                      .+++.||.+    ..+.+||..+++-...- .      .....-.+++..+ +++.++.|+.+      ..+.+||..+.
T Consensus       399 ~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~  478 (695)
T 2zwa_A          399 DVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR  478 (695)
T ss_dssp             CEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTT
T ss_pred             EEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCC
Confidence            477788753    46888998876533222 1      0111112333333 67788887754      35889999876


Q ss_pred             ceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe---cc-CCCceeeeeecCCCCeEEEE
Q psy17682        291 AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE---LD-TSNGVMFPLYDPDTNLVYLC  366 (490)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~---~~-~~~~i~~~~~s~~~~~l~~~  366 (490)
                      +-...-.......-.+++...++++++.|+.+... .+.+||..+..-. ....   .. .......+.+..+...|++.
T Consensus       479 ~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~W~-~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~  556 (695)
T 2zwa_A          479 EWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP-AMLLYNVTEEIFK-DVTPKDEFFQNSLVSAGLEFDPVSKQGIIL  556 (695)
T ss_dssp             EEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC-SEEEEETTTTEEE-ECCCSSGGGGSCCBSCEEEEETTTTEEEEE
T ss_pred             cEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC-CEEEEECCCCceE-EccCCCCCCCcccceeEEEEeCCCCEEEEE
Confidence            43222111111112223333478888888754333 7888998864310 0010   11 11122335556554555577


Q ss_pred             ecC--C-----CeEEEEEecCCC
Q psy17682        367 GKG--D-----SVIRYFEITAEP  382 (490)
Q Consensus       367 g~~--d-----g~i~iwd~~~~~  382 (490)
                      |+.  +     ..+.+||+.+.+
T Consensus       557 GG~~~~~~~~~~~v~~yd~~~~~  579 (695)
T 2zwa_A          557 GGGFMDQTTVSDKAIIFKYDAEN  579 (695)
T ss_dssp             CCBCTTSSCBCCEEEEEEECTTC
T ss_pred             CCcCCCCCeeeCcEEEEEccCCc
Confidence            765  2     468899998876

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=94.40  E-value=0.6  Score=42.00  Aligned_cols=190  Identities=11%  Similarity=0.070  Sum_probs=90.0

Q ss_pred             CEEEEEeC----C-----CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC-----CcEEEEE
Q psy17682        179 NVIASGSE----D-----CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-----NNVAIWN  244 (490)
Q Consensus       179 ~~l~s~~~----d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~v~iwd  244 (490)
                      .+++.|+.    +     ..+.+||..+.+-...-.     +.........+.+  ++ .+++.|+.+     ..+.+||
T Consensus        72 ~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~-----~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd  143 (308)
T 1zgk_A           72 LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAP-----MSVPRNRIGVGVI--DG-HIYAVGGSHGCIHHNSVERYE  143 (308)
T ss_dssp             EEEEECCEEEETTEEEECCCEEEEETTTTEEEECCC-----CSSCCBTCEEEEE--TT-EEEEECCEETTEECCCEEEEE
T ss_pred             EEEEECCCcCCCCCCeecceEEEECCCCCeEeECCC-----CCcCccccEEEEE--CC-EEEEEcCCCCCcccccEEEEC
Confidence            56666654    2     468888887664322111     1111111122222  44 477777643     3588899


Q ss_pred             CCCCeeEEE--EecCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEE
Q psy17682        245 VGTGEIMIQ--IECHPDIVYSASWNWDGSKLLTTCKD-----KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFT  317 (490)
Q Consensus       245 ~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~  317 (490)
                      +.+.+-...  +.........+.+  ++++++.|+.+     ..+.+||+.+.+-...-..........++. -++++++
T Consensus       144 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv  220 (308)
T 1zgk_A          144 PERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCV-LHNCIYA  220 (308)
T ss_dssp             TTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEE
T ss_pred             CCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEE-ECCEEEE
Confidence            887653221  1111111222223  56777777654     458999988765322211111111112222 2677877


Q ss_pred             EEeCCCc--eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC-----CeEEEEEecCCC
Q psy17682        318 TGFSKMS--ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD-----SVIRYFEITAEP  382 (490)
Q Consensus       318 ~~~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d-----g~i~iwd~~~~~  382 (490)
                      .|+.+..  ...+.+||+.+..-. ..........-..++.. ++ .|++.|+.+     ..+.+||+.+.+
T Consensus       221 ~GG~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~  289 (308)
T 1zgk_A          221 AGGYDGQDQLNSVERYDVETETWT-FVAPMKHRRSALGITVH-QG-RIYVLGGYDGHTFLDSVECYDPDTDT  289 (308)
T ss_dssp             ECCBCSSSBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEEE-TT-EEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             EeCCCCCCccceEEEEeCCCCcEE-ECCCCCCCccceEEEEE-CC-EEEEEcCcCCCcccceEEEEcCCCCE
Confidence            7763221  356888988764311 11111111111122222 34 444666643     356777777653

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=94.30  E-value=2.5  Score=37.82  Aligned_cols=180  Identities=5%  Similarity=-0.056  Sum_probs=97.3

Q ss_pred             EEECCCCCCEEEEEeCC-------------CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe--
Q psy17682        171 IAWSPHDDNVIASGSED-------------CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG--  235 (490)
Q Consensus       171 ~~~~p~~~~~l~s~~~d-------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~--  235 (490)
                      --++++|+.+..+...+             ..|+..++...+....          ....  +..|+++++ .|+-..  
T Consensus        58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l----------~~~~--~~~~s~~g~-~Iy~~~~~  124 (302)
T 3s25_A           58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVL----------DPDP--CIYASLIGN-YIYYLHYD  124 (302)
T ss_dssp             EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEE----------ECSC--EEEEEEETT-EEEEEEES
T ss_pred             eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEe----------ecCC--ccEEEEeCC-EEEEEeec
Confidence            34577774444444433             4677777765543221          1111  236788886 555443  


Q ss_pred             --CCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC-CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC
Q psy17682        236 --SDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK-DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS  312 (490)
Q Consensus       236 --~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~  312 (490)
                        .+..|..-++.. .....+..+..    .+++++++.|.-.+. ...|+..++..+.....+.   +. .. ..++|+
T Consensus       125 ~~~~~~Iy~~~~dG-s~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~-~~-~~~~P~  194 (302)
T 3s25_A          125 TQTATSLYRIRIDG-EEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---CN-CY-KPVVLD  194 (302)
T ss_dssp             SSSCEEEEEEETTS-CCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---SC-EE-EEEEEE
T ss_pred             CCCCceEEEEECCC-CCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---CC-cc-ceeeec
Confidence              334566666653 33444543332    456778887776665 5778888887665433222   21 22 235688


Q ss_pred             CcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEe-cCCCeEEEEEecCC
Q psy17682        313 GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCG-KGDSVIRYFEITAE  381 (490)
Q Consensus       313 ~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g-~~dg~i~iwd~~~~  381 (490)
                      +.+|+-.... ....|..-+++..... .+.    ...+  ..|+|+++.|+.+. ...+.|..-++...
T Consensus       195 g~~iy~t~~~-~~~~I~~~~ldG~~~~-~Lt----~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~  256 (302)
T 3s25_A          195 DTNVYYMDVN-RDNAIVHVNINNPNPV-VLT----EANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT  256 (302)
T ss_dssp             TTEEEEEEGG-GTTEEEEECSSSCCCE-ECS----CSCE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred             CCEEEEEEcC-CCcEEEEEECCCCCeE-EEe----CCCc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence            8777665421 1246666677654421 111    1222  45889999997653 23455555555543

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=94.05  E-value=3.5  Score=37.72  Aligned_cols=140  Identities=6%  Similarity=-0.052  Sum_probs=62.1

Q ss_pred             CcEEEEECCCCeeEE--EEecCCCcEEEEEEcCCCCEEEEEeC------CCeEEEEeC--CCCceee--eeeecCCCcee
Q psy17682        238 NNVAIWNVGTGEIMI--QIECHPDIVYSASWNWDGSKLLTTCK------DKKMRIINP--RTGAIEE--EAVCHEGSKAT  305 (490)
Q Consensus       238 g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~--~~~~~~~--~~~~~~~~~~~  305 (490)
                      ..+.+||..+.+-..  .+......-.+++.. ++++++.|+.      ...+.+||+  .+.+-..  .+..... ...
T Consensus       168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~-~~~  245 (357)
T 2uvk_A          168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDG-VAG  245 (357)
T ss_dssp             CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTC-CBS
T ss_pred             ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcc-ccc
Confidence            478899998765322  222111110223322 5667777653      345777887  4332211  1111111 112


Q ss_pred             EEEEeCCCcEEEEEeCCCc-------------------eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEE
Q psy17682        306 RAIYLKSGLIFTTGFSKMS-------------------ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLC  366 (490)
Q Consensus       306 ~~~~s~~~~~l~~~~~~~~-------------------~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  366 (490)
                      ..+...++++++.|+....                   ...+.+||+.+..-. .+........ ...+...+++.+ +.
T Consensus       246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~-~~~~~~~~~~i~-v~  322 (357)
T 2uvk_A          246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWD-KSGELSQGRA-YGVSLPWNNSLL-II  322 (357)
T ss_dssp             CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CE-EEEECSSCCB-SSEEEEETTEEE-EE
T ss_pred             ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCcee-eCCCCCCCcc-cceeEEeCCEEE-EE
Confidence            2233346777777752100                   135778998865422 2222222111 122223345554 56


Q ss_pred             ecCCC------eEEEEEecCCC
Q psy17682        367 GKGDS------VIRYFEITAEP  382 (490)
Q Consensus       367 g~~dg------~i~iwd~~~~~  382 (490)
                      |+.++      .|.++++++++
T Consensus       323 GG~~~~~~~~~~v~~l~~~~~~  344 (357)
T 2uvk_A          323 GGETAGGKAVTDSVLITVKDNK  344 (357)
T ss_dssp             EEECGGGCEEEEEEEEEC-CCS
T ss_pred             eeeCCCCCEeeeEEEEEEcCcE
Confidence            66432      45666888776

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=93.91  E-value=5  Score=38.98  Aligned_cols=74  Identities=16%  Similarity=0.123  Sum_probs=55.0

Q ss_pred             eeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC----------CCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeE
Q psy17682        304 ATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD----------EPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVI  373 (490)
Q Consensus       304 ~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~----------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i  373 (490)
                      ...+..+|||+++++++.  .+.++.++|.+...          ......+.....+....+|+++| ..|.+--.|..|
T Consensus       325 PHGv~vsPDGkyi~v~GK--LsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlfidSqv  401 (638)
T 3sbq_A          325 PHGCNTSSDGKYFIAAGK--LSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLFIDSQV  401 (638)
T ss_dssp             CCCEEECTTSCEEEEECT--TSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEETTTTEE
T ss_pred             CcceeeCCCCCEEEEcCC--CCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeeeeecceE
Confidence            567889999999988763  57788999887421          11123334445668899999999 666777899999


Q ss_pred             EEEEecC
Q psy17682        374 RYFEITA  380 (490)
Q Consensus       374 ~iwd~~~  380 (490)
                      .-|++..
T Consensus       402 vkWni~~  408 (638)
T 3sbq_A          402 VKWNMEE  408 (638)
T ss_dssp             EEEEHHH
T ss_pred             EEEeccH
Confidence            9999975

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=93.90  E-value=6.6  Score=40.35  Aligned_cols=239  Identities=10%  Similarity=0.023  Sum_probs=124.8

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCc--ccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEE
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGI--SRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIW  243 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iw  243 (490)
                      ..|.++.-..+| . |..|+.+| +..++..+++.  ...+........-....|.++.-..++.  |-.|+. +-+..+
T Consensus       324 ~~v~~i~~D~~g-~-lWiGt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~--lWigt~-~GL~~~  397 (758)
T 3ott_A          324 NQFYSLFRDSKG-F-YWFGGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQ--LWIATD-GSINRY  397 (758)
T ss_dssp             CBEEEEEECTTC-C-EEEEETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSC--EEEEET-TEEEEE
T ss_pred             ceEEEEEEcCCC-C-EEEeeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCC--EEEEeC-CcHhhc
Confidence            468888888776 3 44455554 66666544321  1111100000001234588888777774  445554 568999


Q ss_pred             ECCCCeeEEEEe-c-----CCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-----cee---eeee---ecCCCceeE
Q psy17682        244 NVGTGEIMIQIE-C-----HPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTG-----AIE---EEAV---CHEGSKATR  306 (490)
Q Consensus       244 d~~~~~~~~~~~-~-----~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-----~~~---~~~~---~~~~~~~~~  306 (490)
                      |..+++...-.. .     ....|.++.-.++++ |..|+..+-|.++|..+.     ...   ..+.   +.....+.+
T Consensus       398 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~  476 (758)
T 3ott_A          398 DYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQ-LWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQ  476 (758)
T ss_dssp             ETTTTEEEEEEEECCC--CBSSSEEEEEECTTSE-EEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEE
T ss_pred             CcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCC-EEEEECCCceEEEccccccccCCcceecccccccccccccceeee
Confidence            988775433211 1     124588888776665 556776667888885421     111   1111   112224788


Q ss_pred             EEEeCCCcEEEE-EeCCCceeEEEEecCCCCCCCeEEEecc---CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        307 AIYLKSGLIFTT-GFSKMSERQYSLRAPDHLDEPIVMVELD---TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       307 ~~~s~~~~~l~~-~~~~~~~~~i~iwd~~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      +...++|.+.+. ++    .+-+..+|..+..  .......   ....+.++....+|+.. ++ +.+| +..|+..+.+
T Consensus       477 i~~d~~g~lWi~~~t----~~Gl~~~d~~~~~--~~~~~~~~~~~~~~~~~i~~d~~g~lW-ig-t~~G-l~~~~~~~~~  547 (758)
T 3ott_A          477 IIPDNEGNVWVLLYN----NKGIDKINPRTRE--VTKLFADELTGEKSPNYLLCDEDGLLW-VG-FHGG-VMRINPKDES  547 (758)
T ss_dssp             EEECTTSCEEEEETT----CSSEEEEETTTTE--EEEECTTTSCGGGCEEEEEECTTSCEE-EE-ETTE-EEEECC--CC
T ss_pred             EEEcCCCCEEEEccC----CCCcEEEeCCCCc--eEEecCCCcCCCcccceEEECCCCCEE-EE-ecCc-eEEEecCCCc
Confidence            888888887763 43    3346777876542  1111111   12346777788888776 33 3444 7788876654


Q ss_pred             CeeEE-eeeeeCCCceeeEEEeeCceeEEeecceeEEEEecC
Q psy17682        383 PFVHY-INTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNN  423 (490)
Q Consensus       383 ~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~  423 (490)
                       +... ...+. ...|.++... +|.+-+++..-+..++..+
T Consensus       548 -~~~~~~~gl~-~~~i~~i~~~-~g~lWi~t~~Gl~~~~~~~  586 (758)
T 3ott_A          548 -QQSISFGSFS-NNEILSMTCV-KNSIWVSTTNGLWIIDRKT  586 (758)
T ss_dssp             -CCBCCCCC----CCEEEEEEE-TTEEEEEESSCEEEEETTT
T ss_pred             -eEEecccCCC-ccceEEEEEC-CCCEEEECCCCeEEEcCCC
Confidence             1111 01111 2356777654 6666555544444444443

>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*

Probab=92.99  E-value=5.6  Score=36.76  Aligned_cols=143  Identities=10%  Similarity=0.078  Sum_probs=85.0

Q ss_pred             cEEEEECCCC--CcccccccceeeecccccCEEEEEEe---eC---CCCEEEEEe-CCCcEEEEECCCCeeEEEEe----
Q psy17682        189 VVKVWQIPDG--GISRTLTEPVVDLLYHQRRVGLVLWH---PT---AQNVLLTAG-SDNNVAIWNVGTGEIMIQIE----  255 (490)
Q Consensus       189 ~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~---p~---~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~----  255 (490)
                      +|.+||+.++  +.++.+.-|..... ..+.+..+++.   |.   +..++..+. ..+.|.|+|+.+++..+.+.    
T Consensus       124 kLv~~DL~t~~~~li~~y~~p~~~~~-~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~  202 (381)
T 3q6k_A          124 AIVAYDLKQPNYPEVVRYYFPTRLVE-KPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK  202 (381)
T ss_dssp             EEEEEESSSTTCCEEEEEECCGGGCC-CGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred             eEEEEECCCCCceeEEEEECCHHhcc-cCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence            5778888888  77777654433333 34678888888   22   122444433 46789999999887655442    


Q ss_pred             cC--------------CCcEEEEEEcCC----CCEEEEEeCCC-eEEEEe---CCCCceee--eeeecCC--CceeEEEE
Q psy17682        256 CH--------------PDIVYSASWNWD----GSKLLTTCKDK-KMRIIN---PRTGAIEE--EAVCHEG--SKATRAIY  309 (490)
Q Consensus       256 ~~--------------~~~v~~~~~~~~----~~~l~~~~~dg-~i~iwd---~~~~~~~~--~~~~~~~--~~~~~~~~  309 (490)
                      ..              ...+..|+++|+    ++.|.-....+ .++-..   ++......  +..+..+  .....+++
T Consensus       203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~  282 (381)
T 3q6k_A          203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY  282 (381)
T ss_dssp             CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred             cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence            00              246888999997    67666665443 333332   12222111  1123332  22445667


Q ss_pred             e-CCCcEEEEEeCCCceeEEEEecCCC
Q psy17682        310 L-KSGLIFTTGFSKMSERQYSLRAPDH  335 (490)
Q Consensus       310 s-~~~~~l~~~~~~~~~~~i~iwd~~~  335 (490)
                      . .+|.++.+-.   ....|..|+..+
T Consensus       283 D~~~G~ly~~~~---~~~aI~~w~~~~  306 (381)
T 3q6k_A          283 DPKTKVIFFAEA---NTKQVSCWNTQK  306 (381)
T ss_dssp             CTTTCEEEEEES---SSSEEEEEETTS
T ss_pred             eCCCCeEEEEec---cCCeEEEEeCCC
Confidence            5 6788777665   578899999875

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=92.63  E-value=5.4  Score=35.65  Aligned_cols=173  Identities=5%  Similarity=-0.029  Sum_probs=94.1

Q ss_pred             eCCCCEEEEEeC-CCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC--------------CeEEEEeCCC
Q psy17682        225 PTAQNVLLTAGS-DNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD--------------KKMRIINPRT  289 (490)
Q Consensus       225 p~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------g~i~iwd~~~  289 (490)
                      +++..+.++... ++.|...+..... ...+...  .  +--+++++..|.-+...              ..|+..++..
T Consensus        23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~--~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg   97 (302)
T 3s25_A           23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND--T--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG   97 (302)
T ss_dssp             EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE--E--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred             EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC--c--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence            455434444322 4556666654333 3334321  1  23457788887776543              4678888876


Q ss_pred             CceeeeeeecCCCceeEEEEeCCCcEEEEEe-CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEec
Q psy17682        290 GAIEEEAVCHEGSKATRAIYLKSGLIFTTGF-SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGK  368 (490)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~  368 (490)
                      .+... +..  .   ....+++++..|+-.. .......|...+++.... ..+..  +  .+  ..++++++.|+.+..
T Consensus        98 ~~~~~-l~~--~---~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-~~lt~--~--~~--~~~~~~g~~iy~t~~  164 (302)
T 3s25_A           98 HGSTV-LDP--D---PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK-KKIKN--H--YL--FTCNTSDRYFYYNNP  164 (302)
T ss_dssp             CCCEE-EEC--S---CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCC-EEEES--S--CC--CCSEEETTEEEEECT
T ss_pred             CcceE-eec--C---CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCe-EEEeC--C--Cc--eEeeEECCEEEEEeC
Confidence            65322 221  1   1236777888777654 112356777778775432 22221  1  11  467889999988866


Q ss_pred             CCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--ceeEEEEec
Q psy17682        369 GDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFRLN  422 (490)
Q Consensus       369 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~  422 (490)
                      ....|.+.++..+.  .+.+  +..  +. ...++|++.+++-..  +..++++..
T Consensus       165 g~~~Iy~~~l~g~~--~~~l--~~~--~~-~~~~~P~g~~iy~t~~~~~~~I~~~~  213 (302)
T 3s25_A          165 KNGQLYRYDTASQS--EALF--YDC--NC-YKPVVLDDTNVYYMDVNRDNAIVHVN  213 (302)
T ss_dssp             TTCCEEEEETTTTE--EEEE--ECS--CE-EEEEEEETTEEEEEEGGGTTEEEEEC
T ss_pred             CCceEEEEECCCCC--EEEE--eCC--Cc-cceeeecCCEEEEEEcCCCcEEEEEE
Confidence            56778877776654  1222  122  22 234668887766442  223566544

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=91.34  E-value=11  Score=39.72  Aligned_cols=38  Identities=16%  Similarity=0.119  Sum_probs=33.4

Q ss_pred             cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee
Q psy17682        260 IVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV  297 (490)
Q Consensus       260 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  297 (490)
                      .+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d  274 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE  274 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence            46778888888999999999999999999999887764

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=91.15  E-value=5.4  Score=36.29  Aligned_cols=107  Identities=12%  Similarity=0.008  Sum_probs=65.2

Q ss_pred             EEEEEeCCCcEEEEECCCCeeEEEEecC-CCcEEEEEE--cCCCCEEEEE--eCCCeEEEEeCCCCceeeeeeecC---C
Q psy17682        230 VLLTAGSDNNVAIWNVGTGEIMIQIECH-PDIVYSASW--NWDGSKLLTT--CKDKKMRIINPRTGAIEEEAVCHE---G  301 (490)
Q Consensus       230 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~~~v~~~~~--~~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~---~  301 (490)
                      +++.++.||.|.-.|..+|+...+++.. ..++....-  .+.+..++.+  +.||.|+.+|..+|.....+....   .
T Consensus        12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~   91 (339)
T 2be1_A           12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST   91 (339)
T ss_dssp             EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred             EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence            7889999999999999999999998743 122222110  0112234444  589999999998885554443111   1


Q ss_pred             CceeE---EEE-e----CCCcEEEEEeCCCceeEEEEecCCCCCCC
Q psy17682        302 SKATR---AIY-L----KSGLIFTTGFSKMSERQYSLRAPDHLDEP  339 (490)
Q Consensus       302 ~~~~~---~~~-s----~~~~~l~~~~~~~~~~~i~iwd~~~~~~~  339 (490)
                      .+...   ... .    ..+..+.+|+   .++.+.-.|+.+++..
T Consensus        92 SP~~~~~~pvv~~~~~~~~~g~Vy~Gs---~~g~l~ald~~tG~~~  134 (339)
T 2be1_A           92 SPLHLKTNIVVNDSGKIVEDEKVYTGS---MRTIMYTINMLNGEII  134 (339)
T ss_dssp             CSEEEECC----------CCEEEEECE---EEEEEEEEETTTCCEE
T ss_pred             cccccCCCceeecccccccCCEEEEEe---cCCEEEEEECCCCcEE
Confidence            11111   001 0    0344555666   6899999999988743

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=90.64  E-value=11  Score=35.39  Aligned_cols=220  Identities=12%  Similarity=0.043  Sum_probs=126.9

Q ss_pred             CceEEEECCCCCCCCcccCCCCcceeeccc--CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecc
Q psy17682        136 QQALSILPPPSTAPNTGRINADHALVGGHK--GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLY  213 (490)
Q Consensus       136 ~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~--~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  213 (490)
                      ...+.+++++    ...       .++.|.  ..|.-=.|-.+  +.|+-.+ +..|.-|++....      .|...+..
T Consensus        85 g~~lQiFnle----~K~-------klks~~~~e~VvfWkWis~--~~l~lVT-~taVyHWsi~~~s------~P~kvFdR  144 (494)
T 1bpo_A           85 GKTLQIFNIE----MKS-------KMKAHTMTDDVTFWKWISL--NTVALVT-DNAVYHWSMEGES------QPVKMFDR  144 (494)
T ss_dssp             TTEEEEEETT----TTE-------EEEEEECSSCCCEEEEEET--TEEEEEC-SSEEEEEESSSSC------CCEEEEEC
T ss_pred             CCeEEEEchH----Hhh-------hhcceecCCCceEEEecCC--CeEEEEc-CCeeEEecccCCC------Cchhheec
Confidence            7889999996    222       233442  45666667542  4566555 4589999986532      22222322


Q ss_pred             c----ccCEEEEEEeeCCCCEEEEEe------CCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCC---CEEEEEeC--
Q psy17682        214 H----QRRVGLVLWHPTAQNVLLTAG------SDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG---SKLLTTCK--  278 (490)
Q Consensus       214 ~----~~~v~~~~~~p~~~~~l~s~~------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~--  278 (490)
                      |    ...|..-..+++.+.++++|-      -.|.+.+|..+.+ .-+.+++|......+...-+.   ..++.+..  
T Consensus       145 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~  223 (494)
T 1bpo_A          145 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ  223 (494)
T ss_dssp             CGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECST
T ss_pred             chhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence            3    345667777888765555543      2367888987644 445677776544444332211   23444443  


Q ss_pred             -CCeEEEEeCCCC---ce-----eeeee-e--cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc
Q psy17682        279 -DKKMRIINPRTG---AI-----EEEAV-C--HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD  346 (490)
Q Consensus       279 -dg~i~iwd~~~~---~~-----~~~~~-~--~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~  346 (490)
                       .+.++|.++...   .+     ...+. .  ........+..++...++..-+   .-|.+++||+.++.+.....  -
T Consensus       224 ~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviT---K~G~i~lyDleTgt~i~~nr--I  298 (494)
T 1bpo_A          224 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT---KYGYIHLYDLETGTCIYMNR--I  298 (494)
T ss_dssp             TCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEE---TTSEEEEEETTTCCEEEEEE--C
T ss_pred             CCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEe---cCceEEEEecccceeeeeec--c
Confidence             378999998643   11     11111 1  1123367788888765555555   68999999999988655443  2


Q ss_pred             CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        347 TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       347 ~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      ....|...+.+....-+ ++-...|.|.--.+++..
T Consensus       299 s~~~iF~t~~~~~~~Gi-~~Vnr~GqVl~v~v~e~~  333 (494)
T 1bpo_A          299 SGETIFVTAPHEATAGI-IGVNRKGQVLSVCVEEEN  333 (494)
T ss_dssp             CSSCEEEEEEETTTTEE-EEEETTCEEEEEEECTTT
T ss_pred             cCCceEEecccCCCCcE-EEEccCceEEEEEEcccc
Confidence            23445555555555555 344577877777776654

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=90.60  E-value=23  Score=38.90  Aligned_cols=226  Identities=12%  Similarity=0.037  Sum_probs=117.2

Q ss_pred             eCCCceEEEECCCCCCCCcccCCCCcceeecc--cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC-ccccccccee
Q psy17682        133 LKSQQALSILPPPSTAPNTGRINADHALVGGH--KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG-ISRTLTEPVV  209 (490)
Q Consensus       133 ~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h--~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~  209 (490)
                      ...+..+.||+++    ...+       +..|  ..+|.-=.|-..  +.|+-.+ +..|.-|++.... ..+.+... .
T Consensus        82 Lrag~~lQiFnl~----~k~k-------lks~~~~e~VvfWkWis~--~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~-~  146 (1630)
T 1xi4_A           82 LKAGKTLQIFNIE----MKSK-------MKAHTMTDDVTFWKWISL--NTVALVT-DNAVYHWSMEGESQPVKMFDRH-S  146 (1630)
T ss_pred             EecCCeEEEeehH----Hhhh-------hcccccCCCceEEEecCC--CeeEEEc-CCeEEEeccCCCCccHHHHhcc-h
Confidence            3347889999996    2222       2223  245665667643  4455544 3589999996422 22222211 1


Q ss_pred             eecccccCEEEEEEeeCCCCEEEEEe------CCCcEEEEECCCCeeEEEEecCCCcEEEEEEc--CC-CCEEEEEeC--
Q psy17682        210 DLLYHQRRVGLVLWHPTAQNVLLTAG------SDNNVAIWNVGTGEIMIQIECHPDIVYSASWN--WD-GSKLLTTCK--  278 (490)
Q Consensus       210 ~~~~~~~~v~~~~~~p~~~~~l~s~~------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~-~~~l~~~~~--  278 (490)
                      .+.  ...|..-..+++.+.++++|=      -.|.+.+|..+.+ ..+.+.+|......+...  +. ...++.+..  
T Consensus       147 ~L~--~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~  223 (1630)
T 1xi4_A          147 SLA--GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ  223 (1630)
T ss_pred             hcc--cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecC
Confidence            111  345667777888875555553      3477888887543 334455665444333332  11 123332222  


Q ss_pred             -CCeEEEEeCCCC---ceee------eeee--cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc
Q psy17682        279 -DKKMRIINPRTG---AIEE------EAVC--HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD  346 (490)
Q Consensus       279 -dg~i~iwd~~~~---~~~~------~~~~--~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~  346 (490)
                       .+.++|.++...   .+..      .+..  ........+..++...++..-+   .-|.++++|+.++.+.....- .
T Consensus       224 ~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~it---k~G~~~~~d~~t~~~i~~~ri-s  299 (1630)
T 1xi4_A          224 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT---KYGYIHLYDLETGTCIYMNRI-S  299 (1630)
T ss_pred             CCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEe---cCceEEEEecccchhhhhccc-c
Confidence             378999998543   1111      0111  1122255666776644444444   589999999999876554331 1


Q ss_pred             CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        347 TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       347 ~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                       ...|...+.+....-+ ++....|.|.--.+....
T Consensus       300 -~~~iF~~~~~~~~~g~-~~vnr~G~vl~v~v~~~~  333 (1630)
T 1xi4_A          300 -GETIFVTAPHEATAGI-IGVNRKGQVLSVCVEEEN  333 (1630)
T ss_pred             -CCceEEeccCCCCCce-EEEcCCceEEEEEEccch
Confidence             2334333333333333 233466666655555543

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=89.06  E-value=4  Score=39.07  Aligned_cols=106  Identities=11%  Similarity=0.160  Sum_probs=60.3

Q ss_pred             eeEEEEeCCCc--EEEEEeCCCceeEEEEecCCCCC--CCeEEE-e-cc------CCCceeeeeecCC---CCeEEEEec
Q psy17682        304 ATRAIYLKSGL--IFTTGFSKMSERQYSLRAPDHLD--EPIVMV-E-LD------TSNGVMFPLYDPD---TNLVYLCGK  368 (490)
Q Consensus       304 ~~~~~~s~~~~--~l~~~~~~~~~~~i~iwd~~~~~--~~~~~~-~-~~------~~~~i~~~~~s~~---~~~l~~~g~  368 (490)
                      ...++|.|+|.  +|++-    ..+.|++++.....  .++.-. . +.      ...+...++|+|+   ..+||++-+
T Consensus        16 P~~~a~~pdG~~rl~V~e----r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt   91 (463)
T 2wg3_C           16 PVGALHSGDGSQRLFILE----KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT   91 (463)
T ss_dssp             EEEEECCSSSSCCEEEEE----TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred             ceEEEECCCCCeEEEEEe----CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence            78999999985  77765    47889999754321  111111 0 11      1356888999997   445656543


Q ss_pred             CC------------CeEEEEEecCCCC------eeEEeeeee---CCCceeeEEEeeCceeEEeec
Q psy17682        369 GD------------SVIRYFEITAEPP------FVHYINTFQ---TPDPQRGIGMMPKRGCDVNSC  413 (490)
Q Consensus       369 ~d------------g~i~iwd~~~~~~------~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~  413 (490)
                      .+            ..|.-|.+..+.+      -.+.+....   ....-..|+|.|||.+.++.+
T Consensus        92 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~G  157 (463)
T 2wg3_C           92 TNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILG  157 (463)
T ss_dssp             ECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEEC
T ss_pred             CCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeC
Confidence            21            1444466643210      011111111   224568899999998766653

>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}

Probab=88.09  E-value=24  Score=35.76  Aligned_cols=204  Identities=9%  Similarity=0.002  Sum_probs=99.2

Q ss_pred             EEEEE-EeeCCCCEEEEEeCCC----cEEEEECCCCeeEEE-Ee-cCCC------cEEEEEEcCCCCEEEEEe-------
Q psy17682        218 VGLVL-WHPTAQNVLLTAGSDN----NVAIWNVGTGEIMIQ-IE-CHPD------IVYSASWNWDGSKLLTTC-------  277 (490)
Q Consensus       218 v~~~~-~~p~~~~~l~s~~~dg----~v~iwd~~~~~~~~~-~~-~~~~------~v~~~~~~~~~~~l~~~~-------  277 (490)
                      ...+. ++|+++..+++-+..|    .++++|+.+++.+.. +. ..+.      ....++|..++.++++..       
T Consensus       131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~  210 (711)
T 4hvt_A          131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT  210 (711)
T ss_dssp             EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred             EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcC
Confidence            34555 7888875666555444    699999999886531 11 0001      113447764333333211       


Q ss_pred             ---CCCeEEEEeCCCCce--eeeeeecCCCceeEEEEeCCCc-----EEEEEeCCCceeEEEEecCCCCCCCeEEEeccC
Q psy17682        278 ---KDKKMRIINPRTGAI--EEEAVCHEGSKATRAIYLKSGL-----IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDT  347 (490)
Q Consensus       278 ---~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~s~~~~-----~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~  347 (490)
                         ....|+.|.+.+...  ...+.............++++.     .+++.+.+.....+.+.+...............
T Consensus       211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  290 (711)
T 4hvt_A          211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPS  290 (711)
T ss_dssp             TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCT
T ss_pred             cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCC
Confidence               125688898876532  2223333333234455566655     344433222346677777653222211111121


Q ss_pred             CCceeeeeecCCCCeEEEEec---------CCCeEEEEEecCCC------CeeEEeeeeeCCCceeeEEEeeCceeEEee
Q psy17682        348 SNGVMFPLYDPDTNLVYLCGK---------GDSVIRYFEITAEP------PFVHYINTFQTPDPQRGIGMMPKRGCDVNS  412 (490)
Q Consensus       348 ~~~i~~~~~s~~~~~l~~~g~---------~dg~i~iwd~~~~~------~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~  412 (490)
                      ..   .+..+.++.+++.+.+         ..+.|...++.++.      .-.+.+-.......+.++.|..+..++...
T Consensus       291 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~  367 (711)
T 4hvt_A          291 DA---TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLATY  367 (711)
T ss_dssp             TC---EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEE
T ss_pred             cc---eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEEE
Confidence            11   1233445555533322         35678888987642      111222122233467888888875433322


Q ss_pred             -cc--eeEEEEecCC
Q psy17682        413 -CE--IGRFFRLNNS  424 (490)
Q Consensus       413 -~~--~~~~~~~~~~  424 (490)
                       ..  .+.++++.++
T Consensus       368 ~~~~~~l~~~~~~~g  382 (711)
T 4hvt_A          368 DNVVAKVVTFTLENE  382 (711)
T ss_dssp             ETTEEEEEEECEETT
T ss_pred             ECCEEEEEEEECCCC
Confidence             22  3344544444

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=84.59  E-value=25  Score=32.49  Aligned_cols=151  Identities=10%  Similarity=-0.057  Sum_probs=71.5

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCC----cEEEEECCCCCcccccccceeeecc--------cccCEEEEEEeeCC-CCEEE
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDC----VVKVWQIPDGGISRTLTEPVVDLLY--------HQRRVGLVLWHPTA-QNVLL  232 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~--------~~~~v~~~~~~p~~-~~~l~  232 (490)
                      ..|.+|++.|.+...+..++..|    .|... ...++.-..+..+. .+..        +...|.++++.|.. ...+.
T Consensus        55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~-~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~  132 (394)
T 3b7f_A           55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPP-AFNKAPEGETGRVVDHVFWLTPGHASEPGTWY  132 (394)
T ss_dssp             SEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCC-CCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred             CceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccc-cCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence            56899999983223444444444    33332 23333322222110 0110        12357889998732 23556


Q ss_pred             EEeCCCcEEEEECCCCeeEEEEec-------------------CCCcEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCce
Q psy17682        233 TAGSDNNVAIWNVGTGEIMIQIEC-------------------HPDIVYSASWNWD-GSKLLTTCKDKKMRIINPRTGAI  292 (490)
Q Consensus       233 s~~~dg~v~iwd~~~~~~~~~~~~-------------------~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~  292 (490)
                      +++..+.|...+ ..++....+..                   ....+.+|.++|. ...|..+..++.|...+-. ++.
T Consensus       133 ~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~Dg-G~t  210 (394)
T 3b7f_A          133 AGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDA-GTD  210 (394)
T ss_dssp             EEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESST-TSS
T ss_pred             EEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCC-CCC
Confidence            655555554443 22333222211                   1235789999983 4555656555555544322 222


Q ss_pred             eeeeee-cC-----------CCceeEEEEeCC-CcEEEEEe
Q psy17682        293 EEEAVC-HE-----------GSKATRAIYLKS-GLIFTTGF  320 (490)
Q Consensus       293 ~~~~~~-~~-----------~~~~~~~~~s~~-~~~l~~~~  320 (490)
                      -..+.. ..           +..+..+.+.|. ...+.++.
T Consensus       211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~  251 (394)
T 3b7f_A          211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN  251 (394)
T ss_dssp             CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE
T ss_pred             ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc
Confidence            111110 00           123778888886 34455554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	490
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-17
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-09
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	8e-08
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-06
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-06
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	4e-16
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-13
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-09
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	2e-06
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	2e-05
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	8e-05
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-15
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	7e-14
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	4e-13
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-06
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	7e-06
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-05
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	1e-11
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	2e-06
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	2e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	1e-10
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	1e-06
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	5e-05
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	1e-10
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-06
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	4e-06
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	0.001
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	0.003
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	4e-09
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	2e-06
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-04
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	0.001
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	5e-09
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	8e-09
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-07
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	3e-08
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	2e-05
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	3e-08
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	1e-06
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	3e-04
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	5e-08
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	2e-04
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	5e-08
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	2e-06
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	4e-05
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	8e-04
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	1e-07
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	2e-07
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-07
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	7e-05
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	1e-04
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	0.001
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	1e-07
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	7e-06
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	5e-05
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	1e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	0.004
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	2e-07
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	4e-07
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	2e-05
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	0.001
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	2e-07
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	2e-04
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	0.004
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	4e-06
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	1e-05
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	1e-04
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	2e-04
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	5e-04
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	0.001
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	0.001

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 81.7 bits (200), Expect = 1e-17
 Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 7/122 (5%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
           GH+  +  I + P + N  A+GS+D   +++ +       T +            +  V 
Sbjct: 224 GHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHD-----NIICGITSVS 277

Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM 282
           +  +   +LL    D N  +W+    +    +  H + V       DG  + T   D  +
Sbjct: 278 FSKS-GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336

Query: 283 RI 284
           +I
Sbjct: 337 KI 338

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 57.4 bits (137), Expect = 1e-09
 Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 9/81 (11%)

Query: 164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLW 223
               +  +++S     ++ +G +D    VW       +  L         H  RV  +  
Sbjct: 269 IICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADRAGVLAG-------HDNRVSCLGV 320

Query: 224 HPTAQNVLLTAGSDNNVAIWN 244
                  + T   D+ + IWN
Sbjct: 321 TDD-GMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 51.7 bits (122), Expect = 8e-08
 Identities = 47/305 (15%), Positives = 88/305 (28%), Gaps = 47/305 (15%)

Query: 114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPST---APNTGRINADHALVGGHKGPVLD 170
           +E+       ++ K +IR  +   A + L   +         ++     L G H   +  
Sbjct: 2   SELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRG-HLAKIYA 60

Query: 171 IAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL---TEPVVDLLYHQRRVGLVLWHPTA 227
           + W   D  ++ S S+D  + +W          +   +  V+   Y      +       
Sbjct: 61  MHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDN 119

Query: 228 QNVLLTAGS----------------------------------DNNVAIWNVGTGEIMIQ 253
              +    +                                  D   A+W++ TG+    
Sbjct: 120 ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTT 179

Query: 254 IECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG 313
              H   V S S   D    ++   D   ++ + R G   +    HE        +  +G
Sbjct: 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD-INAICFFPNG 238

Query: 314 LIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVI 373
             F TG    + R + LRA   L        +     V F        L+ L G  D   
Sbjct: 239 NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF---SKSGRLL-LAGYDDFNC 294

Query: 374 RYFEI 378
             ++ 
Sbjct: 295 NVWDA 299

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 48.2 bits (113), Expect = 1e-06
 Identities = 23/153 (15%), Positives = 45/153 (29%), Gaps = 7/153 (4%)

Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM 282
                  + ++   D +  +W+V  G        H   + +  +  +G+   T   D   
Sbjct: 191 SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATC 250

Query: 283 RIINPRTGAIEEEAVCHEGSKATRAI-YLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIV 341
           R+ + R                  ++ + KSG +   G+   +   +     D       
Sbjct: 251 RLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD-----RA 305

Query: 342 MVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIR 374
            V     N V       D   V   G  DS ++
Sbjct: 306 GVLAGHDNRVSCLGVTDDGMAV-ATGSWDSFLK 337

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 47.0 bits (110), Expect = 3e-06
 Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVW 193
           GH   V  +  +  D   +A+GS D  +K+W
Sbjct: 310 GHDNRVSCLGVTD-DGMAVATGSWDSFLKIW 339

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 77.5 bits (189), Expect = 4e-16
 Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 13/143 (9%)

Query: 153 RINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEP----- 207
           R+++++    GHK  V  + ++  D   + SGS D  VK+W + +         P     
Sbjct: 242 RLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTC 300

Query: 208 VVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYS---- 263
            V  + H+  V  V         +L+   D  V  W+  +G  ++ ++ H + V S    
Sbjct: 301 EVTYIGHKDFVLSVATTQN-DEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVA 359

Query: 264 --ASWNWDGSKLLTTCKDKKMRI 284
             +S   + +   T   D K RI
Sbjct: 360 NGSSLGPEYNVFATGSGDCKARI 382

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 70.2 bits (170), Expect = 1e-13
 Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 13/142 (9%)

Query: 173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL 232
            SP D   IA+GS D  V+VW    G +   L         H+  V  V++       ++
Sbjct: 212 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD-GQSVV 270

Query: 233 TAGSDNNVAIWNVGTGE------------IMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
           +   D +V +WN+                  +    H D V S +   +   +L+  KD+
Sbjct: 271 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR 330

Query: 281 KMRIINPRTGAIEEEAVCHEGS 302
            +   + ++G        H  S
Sbjct: 331 GVLFWDKKSGNPLLMLQGHRNS 352

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.3 bits (134), Expect = 3e-09
 Identities = 23/85 (27%), Positives = 29/85 (34%), Gaps = 9/85 (10%)

Query: 164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL---TEPVVDLLYHQRRVGL 220
           HK  VL +A +  +D  I SGS+D  V  W    G     L      V+ +         
Sbjct: 307 HKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANG---- 361

Query: 221 VLWHPTAQNVLLTAGSDNNVAIWNV 245
               P   NV  T   D    IW  
Sbjct: 362 SSLGPE-YNVFATGSGDCKARIWKY 385

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.9 bits (112), Expect = 2e-06
 Identities = 31/238 (13%), Positives = 73/238 (30%), Gaps = 43/238 (18%)

Query: 130 IRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCV 189
           + ++     ++ L   S A          +        +  + +SP D   +A+G+ED +
Sbjct: 87  VYRVSDGSLVARLSDDSAANKDPENLNTSSS-PSSDLYIRSVCFSP-DGKFLATGAEDRL 144

Query: 190 VKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL--------------------------- 222
           +++W I +  I   L     D+                                      
Sbjct: 145 IRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE 204

Query: 223 -------WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-------HPDIVYSASWNW 268
                    P     +     D  V +W+  TG ++ +++        H D VYS  +  
Sbjct: 205 DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR 264

Query: 269 DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSER 326
           DG  +++   D+ +++ N +    + ++                  + +   ++  E 
Sbjct: 265 DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEY 322

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.8 bits (104), Expect = 2e-05
 Identities = 38/286 (13%), Positives = 84/286 (29%), Gaps = 25/286 (8%)

Query: 141 ILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGI 200
           IL  P+  P    +    +L   H   V  + +S  D   +A+G  +   +V+++ DG +
Sbjct: 41  ILYNPAL-PREIDVELHKSL--DHTSVVCCVKFSN-DGEYLATGC-NKTTQVYRVSDGSL 95

Query: 201 SRTLTE-----------PVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE 249
              L++                      +  V + P  + +    G+++ +         
Sbjct: 96  VARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA--TGAEDRLIRIWDIENR 153

Query: 250 IMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIY 309
            ++ I    +    +   +     L +    +   I           +  E    T A+ 
Sbjct: 154 KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVS 213

Query: 310 LKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDT--SNGVMFPLYDPDTNLVYLCG 367
              G     G    + R +       ++      E  T   + V   ++  D   V + G
Sbjct: 214 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSV-VSG 272

Query: 368 KGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC 413
             D  ++ + +             +TP+              V S 
Sbjct: 273 SLDRSVKLWNLQNANNKSDS----KTPNSGTCEVTYIGHKDFVLSV 314

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.5 bits (98), Expect = 8e-05
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 5/38 (13%)

Query: 163 GHKGPVLDIAWSPH-----DDNVIASGSEDCVVKVWQI 195
           GH+  V+ +A +       + NV A+GS DC  ++W+ 
Sbjct: 348 GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.5 bits (184), Expect = 1e-15
 Identities = 25/155 (16%), Positives = 54/155 (34%), Gaps = 8/155 (5%)

Query: 130 IRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCV 189
           +  + +++  + L              + +     +    +   S      + SGS D  
Sbjct: 169 VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 228

Query: 190 VKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE 249
           +K+W +  G    TL         H   V  VL+H      +L+   D  + +W+     
Sbjct: 229 IKMWDVSTGMCLMTLVG-------HDNWVRGVLFHSG-GKFILSCADDKTLRVWDYKNKR 280

Query: 250 IMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRI 284
            M  +  H   V S  ++     ++T   D+ +++
Sbjct: 281 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 315

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 70.2 bits (170), Expect = 7e-14
 Identities = 45/264 (17%), Positives = 87/264 (32%), Gaps = 50/264 (18%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL---TEPVVDL-------- 211
           GH+ PV  + + P   +V+ S SED  +KVW    G   RTL   T+ V D+        
Sbjct: 15  GHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 73

Query: 212 -----------------------LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG 248
                                  ++        +      + +++A  D  + +W V TG
Sbjct: 74  LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG 133

Query: 249 EIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAI 308
             +     H + V     N DG+ + +   D+ +R+    T   + E   H       + 
Sbjct: 134 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISW 193

Query: 309 YLKSGLIFTTGFSKMSERQY--------------SLRAPDHLDEPIVMVELDTSNGVMFP 354
             +S     +  +    ++               +++  D      +M  +   N V   
Sbjct: 194 APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV 253

Query: 355 LYDPDTNLVYLCGKGDSVIRYFEI 378
           L+      + L    D  +R ++ 
Sbjct: 254 LFHSGGKFI-LSCADDKTLRVWDY 276

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 67.8 bits (164), Expect = 4e-13
 Identities = 30/152 (19%), Positives = 54/152 (35%), Gaps = 13/152 (8%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTE------------PVVD 210
           GH+  V  +  +  D  +IAS S D  V+VW +        L E                
Sbjct: 141 GHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSY 199

Query: 211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDG 270
               +               LL+   D  + +W+V TG  ++ +  H + V    ++  G
Sbjct: 200 SSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 259

Query: 271 SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGS 302
             +L+   DK +R+ + +     +    HE  
Sbjct: 260 KFILSCADDKTLRVWDYKNKRCMKTLNAHEHF 291

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.8 bits (112), Expect = 1e-06
 Identities = 34/188 (18%), Positives = 69/188 (36%), Gaps = 16/188 (8%)

Query: 191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI 250
           K W IP       L+        H+  V  V++HP   +V+++A  D  + +W+  TG+ 
Sbjct: 1   KEW-IPRPPEKYALSG-------HRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDF 51

Query: 251 MIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYL 310
              ++ H D V   S++  G  L +   D  +++ + +          H+ + ++ +I  
Sbjct: 52  ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP 111

Query: 311 KSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD 370
               I +    K        +  +      V         V     + D  L+  C   D
Sbjct: 112 NGDHIVSASRDKTI------KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS-ND 164

Query: 371 SVIRYFEI 378
             +R + +
Sbjct: 165 QTVRVWVV 172

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.5 bits (106), Expect = 7e-06
 Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 1/32 (3%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ 194
            H+  V  + +       + +GS D  VKVW+
Sbjct: 287 AHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.0 bits (102), Expect = 2e-05
 Identities = 40/225 (17%), Positives = 78/225 (34%), Gaps = 35/225 (15%)

Query: 173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL 232
               + + I S S D  +K+W++  G   +T T        H+  V +V  +     ++ 
Sbjct: 108 SIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-------HREWVRMVRPNQD-GTLIA 159

Query: 233 TAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWD--------------------GSK 272
           +  +D  V +W V T E   ++  H  +V   SW  +                    G  
Sbjct: 160 SCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPF 219

Query: 273 LLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRA 332
           LL+  +DK +++ +  TG      V H+        +     I +    K      +LR 
Sbjct: 220 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK------TLRV 273

Query: 333 PDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFE 377
            D+ ++  +       + V    +      V      D  ++ +E
Sbjct: 274 WDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS-VDQTVKVWE 317

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.1 bits (154), Expect = 1e-11
 Identities = 18/178 (10%), Positives = 45/178 (25%), Gaps = 23/178 (12%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDL-----LYHQRR 217
            H   +  ++      +   S S D  +KVW            +          L+H   
Sbjct: 12  AHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDV 68

Query: 218 VGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQI----------ECHPDIVYSASWN 267
           +  +        ++ T     ++  + +   +   ++          +      ++  W 
Sbjct: 69  LQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWG 128

Query: 268 WDG-----SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGF 320
                    +L+ T       I      A E  ++    S            +  + F
Sbjct: 129 ASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF 186

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.9 bits (112), Expect = 2e-06
 Identities = 15/154 (9%), Positives = 37/154 (24%), Gaps = 26/154 (16%)

Query: 158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL---TEPVVDLLYH 214
           H     H   +  I     +  ++A+ S    +  ++I     ++ +      ++D    
Sbjct: 59  HKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMK 118

Query: 215 QRRVGLVLWHP----TAQNVLLTAGSDNNVAIWNVGTGEIMIQI---------------- 254
           +     + W         + L+         IW                           
Sbjct: 119 KHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVE 178

Query: 255 --ECHPDIVYSASWNWDGSKLLTTCKDKKMRIIN 286
                     S   +  G  + T   +  ++I  
Sbjct: 179 SPMTPSQFATSVDISERG-LIATGFNNGTVQISE 211

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.4 bits (95), Expect = 2e-04
 Identities = 23/148 (15%), Positives = 48/148 (32%), Gaps = 8/148 (5%)

Query: 173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL 232
              HD N     +        +I    +    ++  +    H   V  + ++ +    L 
Sbjct: 247 AIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS-GETLC 305

Query: 233 TAGSDNNVAIWNVGTGEIMIQIECHPDIVY----SASWNWDGSKLLTT---CKDKKMRII 285
           +AG D  +  W+V T E +  +  H D +       + +  G  L            +  
Sbjct: 306 SAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGW 365

Query: 286 NPRTGAIEEEAVCHEGSKATRAIYLKSG 313
               GA   E++C      +   + ++G
Sbjct: 366 RSGMGADLNESLCCVCLDRSIRWFREAG 393

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.6 bits (145), Expect = 1e-10
 Identities = 9/106 (8%), Positives = 29/106 (27%), Gaps = 5/106 (4%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
             K  + DI   P   +++   S D  + V++      +  L +     L ++  +    
Sbjct: 9   APKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQ----SLRYKHPLLCCN 63

Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW 268
           +       +        +   ++        +  +   +       
Sbjct: 64  FIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICK 109

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.3 bits (113), Expect = 1e-06
 Identities = 28/155 (18%), Positives = 45/155 (29%), Gaps = 10/155 (6%)

Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTE--- 206
                +       G K  + D+A  P +    A  S D  V V    D G     ++   
Sbjct: 178 PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237

Query: 207 -----PVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIV 261
                  +        V  + + P     L TAGSD  ++ WN+ T + +       +  
Sbjct: 238 FRCHRLNLKDTNLAYPVNSIEFSPR-HKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDS 296

Query: 262 YSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEA 296
                    + L     D   +        IE  A
Sbjct: 297 -VVKIACSDNILCLATSDDTFKTNAAIDQTIELNA 330

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.9 bits (99), Expect = 5e-05
 Identities = 9/101 (8%), Positives = 31/101 (30%), Gaps = 22/101 (21%)

Query: 189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG 248
           +V++ Q P   IS                   +   P+ +++LL    D ++ ++     
Sbjct: 3   IVQIEQAPKDYISD------------------IKIIPS-KSLLLITSWDGSLTVYKFDIQ 43

Query: 249 EIMIQIEC---HPDIVYSASWNWDGSKLLTTCKDKKMRIIN 286
              + +     +   +   ++  +    +     +   +  
Sbjct: 44  AKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 60.6 bits (145), Expect = 1e-10
 Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 7/105 (6%)

Query: 164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLW 223
              P+   AW+  D   IA    +  V +++       +        L  H  +V  V W
Sbjct: 6   LVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHE-----LKEHNGQVTGVDW 59

Query: 224 HPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW 268
            P   N ++T G+D N  +W +        +        +    W
Sbjct: 60  APD-SNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRW 103

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 47.9 bits (112), Expect = 2e-06
 Identities = 9/67 (13%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEI--MIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
           W+   +  +    +++ V I+     +   + +++ H   V    W  D ++++T   D+
Sbjct: 15  WNKD-RTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDR 73

Query: 281 KMRIINP 287
              +   
Sbjct: 74  NAYVWTL 80

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 46.4 bits (108), Expect = 4e-06
 Identities = 24/135 (17%), Positives = 37/135 (27%), Gaps = 11/135 (8%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
            H G V  + W+P D N I +   D    VW +       TL            R    +
Sbjct: 49  EHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTLKGRTWKPTLVI------LRINRAARCV 101

Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGE----IMIQIECHPDIVYSASWNWDGSKLLTTCK 278
                +           ++I                +     V S  W+ +   L     
Sbjct: 102 RWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 161

Query: 279 DKKMRIINPRTGAIE 293
           D K RI +     +E
Sbjct: 162 DFKCRIFSAYIKEVE 176

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 38.7 bits (88), Expect = 0.001
 Identities = 9/47 (19%), Positives = 14/47 (29%), Gaps = 3/47 (6%)

Query: 152 GRINADHALVGGHKGPVLDIAWSPHDDN---VIASGSEDCVVKVWQI 195
           G   A   L   HK  V  I+             +   D  + +W +
Sbjct: 312 GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 358

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.5 bits (85), Expect = 0.003
 Identities = 19/140 (13%), Positives = 42/140 (30%), Gaps = 11/140 (7%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
              G V  + +   + + +A  S D  V +          T              + L+ 
Sbjct: 199 SSCGWVHGVCF-SANGSRVAWVSHDSTVCLADADKKMAVAT---------LASETLPLLA 248

Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM 282
                ++ L+ AG D    ++   +    +      D+   +S     ++      DKK 
Sbjct: 249 VTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKA 308

Query: 283 RIINPRTGAIEEEAVCHEGS 302
                       +++ H+ S
Sbjct: 309 SSEGSAAAGAGLDSL-HKNS 327

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 55.4 bits (131), Expect = 4e-09
 Identities = 14/106 (13%), Positives = 31/106 (29%), Gaps = 9/106 (8%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
           GH   +  ++ S  D   + S   +  +  W I  G  +R   +       H   +  + 
Sbjct: 10  GHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDV------HATMITGIK 62

Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW 268
                +  L T   D+++ +   G   +         +        
Sbjct: 63  TTS--KGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLA 106

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 47.3 bits (110), Expect = 2e-06
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL 232
               D+  +A+GS D  V VW +        + +      +    V  V+W    +  ++
Sbjct: 231 SWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIK----GAHAMSSVNSVIWLN--ETTIV 284

Query: 233 TAGSDNNVAIWNV 245
           +AG D+N+  WNV
Sbjct: 285 SAGQDSNIKFWNV 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 41.9 bits (96), Expect = 1e-04
 Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 2/47 (4%)

Query: 150 NTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP 196
           N    +            V  + W   ++  I S  +D  +K W +P
Sbjct: 254 NKPSDHPIIIKGAHAMSSVNSVIW--LNETTIVSAGQDSNIKFWNVP 298

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 38.8 bits (88), Expect = 0.001
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGE---IMIQIECHPDIVYSASWNWDGSKLLTTCKD 279
                   L T   DN+V +WN+       I+I+       V S  W  + + +++  +D
Sbjct: 231 SWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL-NETTIVSAGQD 289

Query: 280 KKMRI 284
             ++ 
Sbjct: 290 SNIKF 294

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (131), Expect = 5e-09
 Identities = 17/122 (13%), Positives = 35/122 (28%), Gaps = 11/122 (9%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
                +  + + P  + +        V  +                     H+  V  + 
Sbjct: 222 DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLH---------LHESCVLSLK 272

Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM 282
           +        ++ G DN +  W    G  + Q +     V S   + D   ++T   DKK 
Sbjct: 273 FAYC-GKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKA 330

Query: 283 RI 284
            +
Sbjct: 331 TV 332

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (130), Expect = 8e-09
 Identities = 12/82 (14%), Positives = 24/82 (29%), Gaps = 10/82 (12%)

Query: 164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLW 223
           H+  VL + ++        S  +D ++  W+ P G                   V     
Sbjct: 264 HESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPYGASIFQSK--------ESSSVLSCDI 314

Query: 224 HPTAQNVLLTAGSDNNVAIWNV 245
                  ++T   D    ++ V
Sbjct: 315 SVD-DKYIVTGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (119), Expect = 2e-07
 Identities = 21/132 (15%), Positives = 35/132 (26%), Gaps = 7/132 (5%)

Query: 137 QALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIP 196
           Q +   P     P   R +A       H   V  +  S      + +G + C VKVW I 
Sbjct: 24  QPVPFPPDALIGPGIPR-HARQINTLNHGEVVCAVTISN-PTRHVYTGGKGC-VKVWDIS 80

Query: 197 DGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC 256
             G    +++  +D L     +      P      L  G + +                 
Sbjct: 81  HPGNKSPVSQ--LDCLNRDNYIRSCKLLPDGC--TLIVGGEASTLSIWDLAAPTPRIKAE 136

Query: 257 HPDIVYSASWNW 268
                 +     
Sbjct: 137 LTSSAPACYALA 148

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 52.6 bits (124), Expect = 3e-08
 Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 2/116 (1%)

Query: 173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL 232
               D ++ AS   D  + ++   DG  +    +  +  + H   V  + W P     + 
Sbjct: 196 RYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD-GTKIA 254

Query: 233 TAGSDNNVAIWNVGTGEIMIQIECHPDI-VYSASWNWDGSKLLTTCKDKKMRIINP 287
           +A +D  + IWNV T ++   I     I        W    L++   +  +  +NP
Sbjct: 255 SASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 44.1 bits (102), Expect = 2e-05
 Identities = 12/87 (13%), Positives = 22/87 (25%), Gaps = 3/87 (3%)

Query: 214 HQRRVGLVL-WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSK 272
             R   +VL   P    +     +  +V    VG+         H      A  +  G  
Sbjct: 15  TARGTAVVLGNTPAGDKIQ--YCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYY 72

Query: 273 LLTTCKDKKMRIINPRTGAIEEEAVCH 299
             +      +RI +        +    
Sbjct: 73  CASGDVHGNVRIWDTTQTTHILKTTIP 99

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (124), Expect = 3e-08
 Identities = 22/134 (16%), Positives = 46/134 (34%), Gaps = 21/134 (15%)

Query: 160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVG 219
            V    G    IA   + D ++ SGS D  +++W I  G   R            +    
Sbjct: 170 FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV----------LEGHEE 219

Query: 220 LVLWHPTAQNVLLTAGSDNNVAIWNVGTGE---------IMIQIECHPDIVYSASWNWDG 270
           LV         +++   D  + +W++              +  +  H   V+   +  D 
Sbjct: 220 LVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DE 277

Query: 271 SKLLTTCKDKKMRI 284
            +++++  D  + I
Sbjct: 278 FQIVSSSHDDTILI 291

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (111), Expect = 1e-06
 Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 5/90 (5%)

Query: 157 DHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL--TEPVVDLLYH 214
             A +   +G    +     D+  I SG+ D  +KVW +      R    T  +  L+ H
Sbjct: 207 CGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH 266

Query: 215 QRRVGLVLWHPTAQNVLLTAGSDNNVAIWN 244
             RV  + +       ++++  D+ + IW+
Sbjct: 267 SGRVFRLQFDE---FQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (93), Expect = 3e-04
 Identities = 29/253 (11%), Positives = 65/253 (25%), Gaps = 23/253 (9%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
                V  + +   DD  I SG  D  +K+W        R LT        H   V  + 
Sbjct: 13  ETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTG-------HTGSVLCLQ 62

Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKM 282
           +        +     ++  +         +               ++   ++T  KD+ +
Sbjct: 63  YDER-----VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSI 117

Query: 283 RIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM 342
            + +  +           G +A   +         +     + + ++    +      V 
Sbjct: 118 AVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEF-----VR 172

Query: 343 VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGM 402
                  G+    Y        + G  D+ IR ++I             +     R    
Sbjct: 173 TLNGHKRGIACLQYRDRL---VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 229

Query: 403 MPKRGCDVNSCEI 415
               G      ++
Sbjct: 230 RIVSGAYDGKIKV 242

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 52.4 bits (124), Expect = 5e-08
 Identities = 21/149 (14%), Positives = 39/149 (26%), Gaps = 10/149 (6%)

Query: 158 HALVGGHKGPVLDIAWSPHDDNV-IASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQR 216
                 H+  +L       DD    A+           +  G                  
Sbjct: 199 PHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA------DLTE 252

Query: 217 RVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTT 276
                L  P   N     G  N +A +++   +++          Y  +++  G KL   
Sbjct: 253 LYFTGLRSPKDPNQ--IYGVLNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLG 309

Query: 277 CKDKKMRIINPRTGAIEEEAVCHEGSKAT 305
                + + NP T    +      G  +T
Sbjct: 310 GTFNDLAVFNPDTLEKVKNIKLPGGDMST 338

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 40.9 bits (94), Expect = 2e-04
 Identities = 6/98 (6%), Positives = 23/98 (23%), Gaps = 7/98 (7%)

Query: 171 IAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNV 230
            A        +   +    + V  +    + ++   P       +   G  +  P  +  
Sbjct: 2   PALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCVMP------DKFGPGTAMMAPDNRTA 54

Query: 231 LLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW 268
            +      ++   ++ T +                  +
Sbjct: 55  YVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMY 92

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.6 bits (124), Expect = 5e-08
 Identities = 31/303 (10%), Positives = 79/303 (26%), Gaps = 17/303 (5%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
           GH   V+       +DN + +G++D +++V+   +      L+        H   V  + 
Sbjct: 10  GHMTSVIT-CLQF-EDNYVITGADDKMIRVYDSINKKFLLQLSG-------HDGGVWALK 60

Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGT--GEIMIQIECHPDIVYSASWNWDGSKLLTTCKDK 280
           +      +L++  +D  V +W++       + +               +   ++T  +D 
Sbjct: 61  YAHG--GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDN 118

Query: 281 KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI 340
            + +           +V   G +    +   +          +     S+R        +
Sbjct: 119 TLHVWKLPKE----SSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIV 174

Query: 341 VMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGI 400
           V    D +  V          ++           Y              T +  D + G 
Sbjct: 175 VSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 234

Query: 401 GMMPKRGCDVNSCEIGRFFRLNNSGLCQVVSMTVPRKSELFQDDLYPDTVGDTAALTADE 460
            M   +G       +    +   S                 +   +   +         +
Sbjct: 235 LMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSD 294

Query: 461 WFA 463
              
Sbjct: 295 NIL 297

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.6 bits (111), Expect = 2e-06
 Identities = 11/80 (13%), Positives = 28/80 (35%), Gaps = 9/80 (11%)

Query: 164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLW 223
           H   +  I      DN++ SGS +    ++ +  G +         ++L    ++  V +
Sbjct: 280 HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHA------NILKDADQIWSVNF 332

Query: 224 HPTAQNVLLTAGSDNNVAIW 243
               + ++     D    + 
Sbjct: 333 KG--KTLVAAVEKDGQSFLE 350

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.3 bits (100), Expect = 4e-05
 Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 213 YHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE-IMIQIECHPDIVYSASWNWDGS 271
           YH   +  +     + N +L +GS+N   I+N+ +G+ +   I    D ++S ++    +
Sbjct: 279 YHHTNLSAITTFYVSDN-ILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKT 336

Query: 272 KLLTTCKDKKMRI 284
            +    KD +  +
Sbjct: 337 LVAAVEKDGQSFL 349

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.1 bits (89), Expect = 8e-04
 Identities = 4/36 (11%), Positives = 13/36 (36%), Gaps = 2/36 (5%)

Query: 158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW 193
           HA +      +  + +      ++A+  +D    + 
Sbjct: 317 HANILKDADQIWSVNFKG--KTLVAAVEKDGQSFLE 350

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (121), Expect = 1e-07
 Identities = 21/127 (16%), Positives = 45/127 (35%), Gaps = 15/127 (11%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
           GH+     +       N++ SG+ D  VK+W I          + +  L    +    V 
Sbjct: 215 GHQSLTSGMELKD---NILVSGNADSTVKIWDIKT-------GQCLQTLQGPNKHQSAVT 264

Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIM-----IQIECHPDIVYSASWNWDGSKLLTTC 277
                +N ++T+  D  V +W++ TGE +     ++      +V+    +          
Sbjct: 265 CLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGS 324

Query: 278 KDKKMRI 284
           ++     
Sbjct: 325 RNGTEET 331

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (120), Expect = 2e-07
 Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 15/169 (8%)

Query: 165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWH 224
           +G    +     D   + SGS D  ++VW +  G    TLT        HQ     +   
Sbjct: 174 QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT-------GHQSLTSGMELK 226

Query: 225 PTAQNVLLTAGSDNNVAIWNVG-TGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMR 283
               N+L++  +D+ V IW++     +      +          ++ + ++T+  D  ++
Sbjct: 227 D---NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVK 283

Query: 284 IINPRTGAIEEEAVCHEGSKATRAIY----LKSGLIFTTGFSKMSERQY 328
           + + +TG      V  E   +   ++      + L+   G    +E   
Sbjct: 284 LWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETK 332

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (117), Expect = 3e-07
 Identities = 41/276 (14%), Positives = 82/276 (29%), Gaps = 45/276 (16%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL---TEPVVDL-------- 211
           GH   V+         N I SGS+D  +KVW    G   RTL   T  V           
Sbjct: 14  GHDDHVIT-CLQF-CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII 71

Query: 212 -------------------LYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMI 252
                                       V      +  +++   D  + +W++ TG+ + 
Sbjct: 72  SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH 131

Query: 253 QIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS 312
            +  H   V      +DG ++++   D  +++ +P T         H     +       
Sbjct: 132 VLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF---D 186

Query: 313 GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSV 372
           G+   +G    S R + +   + +        L +         +   N++ + G  DS 
Sbjct: 187 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-------MELKDNIL-VSGNADST 238

Query: 373 IRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGC 408
           ++ ++I             +       +        
Sbjct: 239 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI 274

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (98), Expect = 7e-05
 Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 243 WNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGS 302
           W  G  +    ++ H D V +    + G+++++   D  +++ +  TG      V H G 
Sbjct: 1   WRRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (97), Expect = 1e-04
 Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 9/77 (11%)

Query: 193 WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMI 252
           W+  +    + L         H   V +        N +++   DN + +W+  TG+ + 
Sbjct: 1   WRRGELKSPKVLKG-------HDDHV-ITCLQFC-GNRIVSGSDDNTLKVWSAVTGKCLR 51

Query: 253 QIECHPDIVYSASWNWD 269
            +  H   V+S+    +
Sbjct: 52  TLVGHTGGVWSSQMRDN 68

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (89), Expect = 0.001
 Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 11/82 (13%)

Query: 173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL 232
               + N + + S+D  VK+W +  G   R L    ++       V  +    T   ++ 
Sbjct: 265 CLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL--VTLESGGSGGVVWRIRASNT--KLVC 320

Query: 233 TAGSDNNVAIWNVGTGEIMIQI 254
             GS N       GT E  + +
Sbjct: 321 AVGSRN-------GTEETKLLV 335

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.7 bits (119), Expect = 1e-07
 Identities = 15/75 (20%), Positives = 35/75 (46%), Gaps = 8/75 (10%)

Query: 171 IAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNV 230
                 +++++A+GS D  + ++ +          + +  L  H+  V  +LW     + 
Sbjct: 220 ANEEEIEEDLVATGSLDTNIFIYSVKRPM------KIIKALNAHKDGVNNLLWET--PST 271

Query: 231 LLTAGSDNNVAIWNV 245
           L+++G+D  +  WNV
Sbjct: 272 LVSSGADACIKRWNV 286

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.3 bits (105), Expect = 7e-06
 Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 2/33 (6%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI 195
            HK  V ++ W     + + S   D  +K W +
Sbjct: 256 AHKDGVNNLLWET--PSTLVSSGADACIKRWNV 286

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.6 bits (98), Expect = 5e-05
 Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 5/36 (13%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDG 198
           GH   +  +  +P     + SGS D  +  W     
Sbjct: 11  GHNKGITALTVNP-----LISGSYDGRIMEWSSSSM 41

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.5 bits (95), Expect = 1e-04
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 233 TAGSDNNVAIWNVGTGEIMIQI-ECHPDIVYSASWNWDGSKLLTTCKDKKMRI 284
           T   D N+ I++V     +I+    H D V +  W      L+++  D  ++ 
Sbjct: 232 TGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKR 283

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.9 bits (83), Expect = 0.004
 Identities = 8/65 (12%), Positives = 24/65 (36%), Gaps = 10/65 (15%)

Query: 206 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSAS 265
           E +  +  H + +  +  +P     L++   D  +  W+  +       + H +++ S  
Sbjct: 4   EVLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSSSMH-----QDHSNLIVSLD 53

Query: 266 WNWDG 270
            +   
Sbjct: 54  NSKAQ 58

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.7 bits (119), Expect = 2e-07
 Identities = 12/73 (16%), Positives = 23/73 (31%), Gaps = 5/73 (6%)

Query: 173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL 232
            S  D    A+   D  ++VW +      +  T     L   Q     V    T    ++
Sbjct: 258 LSWLDSQKFATVGADATIRVWDVTTSKCVQKWT-----LDKQQLGNQQVGVVATGNGRII 312

Query: 233 TAGSDNNVAIWNV 245
           +   D  +  + +
Sbjct: 313 SLSLDGTLNFYEL 325

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.5 bits (116), Expect = 4e-07
 Identities = 24/157 (15%), Positives = 46/157 (29%), Gaps = 30/157 (19%)

Query: 140 SILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG 199
            I+PP    P+T R                 +++ P  + +     +   V+     D  
Sbjct: 7   EIIPP---QPSTQR------------NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSK 51

Query: 200 ISRTLTEPVVDLLYHQ-RRVGLVLWHPTA-QNVLLTAGSDNNVAIWNVGTGEIMIQIEC- 256
                  PVV    H    V  V + P      L +      V +W     +    +E  
Sbjct: 52  -----VPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVN 106

Query: 257 -------HPDIVYSASWNWDGSKLLTTCKDKKMRIIN 286
                      +   SW+++G +L    + +    + 
Sbjct: 107 VKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVF 143

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.1 bits (102), Expect = 2e-05
 Identities = 13/125 (10%), Positives = 37/125 (29%), Gaps = 8/125 (6%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVL 222
                V D+ +SP     + +   D  +  +    G   + + +    +           
Sbjct: 203 KQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFA----- 257

Query: 223 WHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW---DGSKLLTTCKD 279
                     T G+D  + +W+V T + + +       + +           ++++   D
Sbjct: 258 LSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD 317

Query: 280 KKMRI 284
             +  
Sbjct: 318 GTLNF 322

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.1 bits (89), Expect = 0.001
 Identities = 4/35 (11%), Positives = 12/35 (34%)

Query: 161 VGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI 195
           +   +     +      +  I S S D  +  +++
Sbjct: 291 LDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 50.2 bits (118), Expect = 2e-07
 Identities = 12/123 (9%), Positives = 33/123 (26%), Gaps = 10/123 (8%)

Query: 170 DIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQN 229
               +  D +     +    +    +  G ++                      +P    
Sbjct: 201 PFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI------MDVFYFSTAVNPAKT- 253

Query: 230 VLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRT 289
                G+ N +  +++     + ++   P   YS + + DGS +        +   +  T
Sbjct: 254 --RAFGAYNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310

Query: 290 GAI 292
              
Sbjct: 311 LEK 313

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 40.9 bits (94), Expect = 2e-04
 Identities = 17/162 (10%), Positives = 43/162 (26%), Gaps = 13/162 (8%)

Query: 228 QNVLLTAGSDNNVAIWNVGTGEI--MIQIECHPDIVYSASWNWDGSKLLTTC-KDKKMRI 284
           ++ +L     + + + +     +  +I I               G     T  K + +  
Sbjct: 1   RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60

Query: 285 INPRTGAIEEEAVCHEGSKATRAIY----------LKSGLIFTTGFSKMSERQYSLRAPD 334
           I+  TG            +  ++++          L              E Q +  A  
Sbjct: 61  IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120

Query: 335 HLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYF 376
             +        +    +    +  D + +Y  G+   V+   
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPE 162

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 37.1 bits (84), Expect = 0.004
 Identities = 13/117 (11%), Positives = 38/117 (32%), Gaps = 10/117 (8%)

Query: 179 NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN 238
           + I + +    + V       + + +T              + +  P  +    T     
Sbjct: 2   DYILAPARPDKLVVIDTEKMAVDKVITIA-----DAGPTPMVPMVAPGGRIAYATVNKSE 56

Query: 239 NVAIWNVGTGEIMIQIECHPDI-----VYSASWNWDGSKLLTTCKDKKMRIINPRTG 290
           ++   ++ TGE + +I+          ++ A+ + DG  L       ++ + +    
Sbjct: 57  SLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQ 113

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 46.5 bits (109), Expect = 4e-06
 Identities = 14/152 (9%), Positives = 28/152 (18%), Gaps = 7/152 (4%)

Query: 145 PSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL 204
                  G        +        D A +       A G     V+V+          +
Sbjct: 53  AGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADI 112

Query: 205 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSA 264
             P         RV ++    ++  +L      +  A  +V         +         
Sbjct: 113 ELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHP 172

Query: 265 SWNW-------DGSKLLTTCKDKKMRIINPRT 289
                        S   +              
Sbjct: 173 GAAATHYLGSCPASLAASDLAAAPAAAGIVGA 204

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 44.9 bits (104), Expect = 1e-05
 Identities = 29/219 (13%), Positives = 65/219 (29%), Gaps = 15/219 (6%)

Query: 172 AWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVL 231
            +SP D ++IA  S      +  +  G     +            R+  V      +   
Sbjct: 9   DFSPLDGDLIAFVSRG-QAFIQDV-SGTYVLKVP--------EPLRIRYVRRGGDTKVAF 58

Query: 232 LTAGSDNN-VAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTG 290
           +    + + + I++  TG+   + E +   V++   + +G   +      ++  ++  TG
Sbjct: 59  IHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG 117

Query: 291 AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDH---LDEPIVMVELDT 347
                    E       I   S  I      K  E    +    H   ++   +      
Sbjct: 118 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE 177

Query: 348 SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVH 386
           ++    P +D D+  +Y             +     F  
Sbjct: 178 NSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEV 216

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 42.2 bits (97), Expect = 1e-04
 Identities = 11/128 (8%), Positives = 28/128 (21%), Gaps = 6/128 (4%)

Query: 173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL 232
               D   +   S   +           S  +      +             P +     
Sbjct: 185 AFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEA 244

Query: 233 TAGSDNNVAIWNV------GTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIIN 286
                N++   +       G   ++I +E    I          +      +   +   +
Sbjct: 245 GEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYD 304

Query: 287 PRTGAIEE 294
            +T  + E
Sbjct: 305 VKTRKVTE 312

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 41.4 bits (95), Expect = 2e-04
 Identities = 9/50 (18%), Positives = 18/50 (36%), Gaps = 4/50 (8%)

Query: 163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL---TEPVV 209
             K  + D+  S  D   +    +D  +  + +      RT+     P+V
Sbjct: 312 EVKNNLTDLRLSA-DRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPLV 360

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.9 bits (92), Expect = 5e-04
 Identities = 17/105 (16%), Positives = 37/105 (35%), Gaps = 8/105 (7%)

Query: 193 WQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL-TAGSDNNVAIWNVGTGEIM 251
           W +P+   S  +     D           L      N+   T      +A+ +  + +I+
Sbjct: 2   WGMPEMRESWKVLVKPEDRPKK------QLNDLDLPNLFSVTLRDAGQIALVDGDSKKIV 55

Query: 252 IQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEA 296
             I+     V+ +  +  G  LL   +D ++ +I+       + A
Sbjct: 56  KVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVA 99

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 38.3 bits (87), Expect = 0.001
 Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 233 TAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KDKKMRIINPRTGA 291
                +N+++ +V + ++   I    +    A  + DG+K+         + II+  T  
Sbjct: 7   ANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNN 65

Query: 292 IEEEAVCHEG 301
           +         
Sbjct: 66  VIATVPAGSS 75

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 38.6 bits (88), Expect = 0.001
 Identities = 14/119 (11%), Positives = 30/119 (25%), Gaps = 13/119 (10%)

Query: 151 TGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD 210
            G        V  H+     I       +     +    V V     G            
Sbjct: 244 DGWRPGGWQQVAYHRALDR-IYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE----- 297

Query: 211 LLYHQRRVGLVLWHPTAQNVLLTAGS-DNNVAIWNVGTGEIMIQIECH---PDIVYSAS 265
                  +  +      + +L    + D  + I +  +GE +  +      P ++ +A 
Sbjct: 298 ---MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 353

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	490
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.98
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.97
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.97
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.97
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.96
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.96
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.96
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.95
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.94
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.93
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.93
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.93
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.92
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.92
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.92
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.91
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.9
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.88
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.87
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.86
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.83
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.83
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.82
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.78
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.78
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.77
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.75
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.71
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.58
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.56
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.51
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.46
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.45
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.33
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.32
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.31
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.26
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.2
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.19
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.13
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.08
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.06
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.04
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.04
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.04
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.02
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.96
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.95
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.9
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.64
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.64
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.41
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	98.33
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.28
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.16
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	98.08
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	97.98
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	97.98
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.97
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	97.84
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	97.79
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.29
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.17
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.13
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	97.04
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	96.97
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	96.85
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	96.84
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	96.47
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	96.09
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	96.01
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	95.92
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	95.39
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	95.38
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	95.23
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	95.22
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	95.07
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	94.78
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	93.96
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	92.37
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	91.6
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	91.45
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	91.07
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	85.55
d2ebsa1	427	Oligoxyloglucan reducing end-specific cellobiohydr	83.85
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	83.83
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	83.62
d2ebsa1	427	Oligoxyloglucan reducing end-specific cellobiohydr	80.35

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-40  Score=311.10  Aligned_cols=288  Identities=13%  Similarity=0.125  Sum_probs=242.2

Q ss_pred             cccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEec
Q psy17682         40 LLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITIS  119 (490)
Q Consensus        40 l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  119 (490)
                      ..+|...|++++|+|++ .+|+||+ ||.|+|||+..+....                                      
T Consensus        47 ~~~H~~~V~~v~fs~~g-~~latg~-dg~V~iWd~~~~~~~~--------------------------------------   86 (337)
T d1gxra_          47 TLNHGEVVCAVTISNPT-RHVYTGG-KGCVKVWDISHPGNKS--------------------------------------   86 (337)
T ss_dssp             EECCSSCCCEEEECSSS-SEEEEEC-BSEEEEEETTSTTCCS--------------------------------------
T ss_pred             ECCCCCcEEEEEECCCC-CEEEEEE-CCEEEEEEccCCcccc--------------------------------------
Confidence            33899999999999999 8999988 7999999998754110                                      


Q ss_pred             cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682        120 EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG  199 (490)
Q Consensus       120 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~  199 (490)
                                                         ........+|.+.|.+++|+|++ ++|++|+.||+|++||+....
T Consensus        87 -----------------------------------~~~~~~~~~h~~~I~~v~~s~dg-~~l~s~~~dg~i~iwd~~~~~  130 (337)
T d1gxra_          87 -----------------------------------PVSQLDCLNRDNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAAPT  130 (337)
T ss_dssp             -----------------------------------CSEEEECSCTTSBEEEEEECTTS-SEEEEEESSSEEEEEECCCC-
T ss_pred             -----------------------------------eeEEeeecCCCCcEEEEEEcCCC-CEEEEeecccccccccccccc
Confidence                                               00001224799999999999998 899999999999999987654


Q ss_pred             cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC
Q psy17682        200 ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD  279 (490)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  279 (490)
                      ...     ...+..|...+.+++|+|++. ++++++.|+.|++|++.+++.......|...|.+++|++++..+++++.|
T Consensus       131 ~~~-----~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d  204 (337)
T d1gxra_         131 PRI-----KAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD  204 (337)
T ss_dssp             -EE-----EEEEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ccc-----ccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            322     223566899999999999985 99999999999999999999998888999999999999999999999999


Q ss_pred             CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCC
Q psy17682        280 KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPD  359 (490)
Q Consensus       280 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~  359 (490)
                      +.+++||+++++.+..+. +.. .+.+++|+|++.++++|+   .++.+++||++...   ......|...|.+++|+|+
T Consensus       205 ~~v~i~d~~~~~~~~~~~-~~~-~i~~l~~~~~~~~l~~~~---~d~~i~i~d~~~~~---~~~~~~~~~~i~~v~~s~~  276 (337)
T d1gxra_         205 NTVRSWDLREGRQLQQHD-FTS-QIFSLGYCPTGEWLAVGM---ESSNVEVLHVNKPD---KYQLHLHESCVLSLKFAYC  276 (337)
T ss_dssp             SEEEEEETTTTEEEEEEE-CSS-CEEEEEECTTSSEEEEEE---TTSCEEEEETTSSC---EEEECCCSSCEEEEEECTT
T ss_pred             ccccccccccceeecccc-ccc-ceEEEEEcccccccceec---cccccccccccccc---cccccccccccceEEECCC
Confidence            999999999998877665 444 499999999999999998   68899999998765   3345567788999999999


Q ss_pred             CCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec--ceeEEEEec
Q psy17682        360 TNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFRLN  422 (490)
Q Consensus       360 ~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~  422 (490)
                      +++| ++|+.||.|++||+.+++    .+....+...|.+++|+|+++++++++  +.+++|++.
T Consensus       277 g~~l-~s~s~Dg~i~iwd~~~~~----~~~~~~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl~  336 (337)
T d1gxra_         277 GKWF-VSTGKDNLLNAWRTPYGA----SIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI  336 (337)
T ss_dssp             SSEE-EEEETTSEEEEEETTTCC----EEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred             CCEE-EEEeCCCeEEEEECCCCC----EEEEccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence            9998 789999999999999987    334456778999999999999988763  578999873

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.4e-38  Score=289.71  Aligned_cols=288  Identities=18%  Similarity=0.255  Sum_probs=244.7

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      .+..+|.||.+.|++|+|+|++ .+|+|||.||+|+|||+.+++.                                   
T Consensus         8 ~~~~~L~GH~~~I~~l~~sp~~-~~l~s~s~Dg~i~iWd~~~~~~-----------------------------------   51 (317)
T d1vyhc1           8 PEKYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGDF-----------------------------------   51 (317)
T ss_dssp             SCSCEEECCSSCEEEEEECSSS-SEEEEEESSSCEEEEETTTCCC-----------------------------------
T ss_pred             CccEEEcCCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEECCCCCE-----------------------------------
Confidence            3446799999999999999999 8999999999999999987541                                   


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                                                                 ...+.+|.+.|.+++|+|++ .++++++.++.+.+|+
T Consensus        52 -------------------------------------------~~~~~~h~~~V~~~~~~~~~-~~~~~~~~~~~~~~~~   87 (317)
T d1vyhc1          52 -------------------------------------------ERTLKGHTDSVQDISFDHSG-KLLASCSADMTIKLWD   87 (317)
T ss_dssp             -------------------------------------------CEEECCCSSCEEEEEECTTS-SEEEEEETTSCCCEEE
T ss_pred             -------------------------------------------EEEEeCCCCcEEEEeeeccc-cccccccccccccccc
Confidence                                                       12456799999999999988 8999999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEE
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLL  274 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  274 (490)
                      ....+....       +.+|...+.++.|+|++. .+++++.|+.+++||+++++.+..+..|...+.+++|+|++++|+
T Consensus        88 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  159 (317)
T d1vyhc1          88 FQGFECIRT-------MHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA  159 (317)
T ss_dssp             TTSSCEEEC-------CCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred             ccccccccc-------cccccccceeeeccCCCc-eEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEE
Confidence            877665443       445899999999999985 899999999999999999999999999999999999999999999


Q ss_pred             EEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCC--------------------cEEEEEeCCCceeEEEEecCC
Q psy17682        275 TTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG--------------------LIFTTGFSKMSERQYSLRAPD  334 (490)
Q Consensus       275 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~--------------------~~l~~~~~~~~~~~i~iwd~~  334 (490)
                      +++.|+.|++|++++++....+..+... +..+.++|++                    .++++++   .|+.|++||++
T Consensus       160 ~~~~d~~v~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~i~~~~~~  235 (317)
T d1vyhc1         160 SCSNDQTVRVWVVATKECKAELREHRHV-VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS---RDKTIKMWDVS  235 (317)
T ss_dssp             EEETTSCEEEEETTTCCEEEEECCCSSC-EEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE---TTSEEEEEETT
T ss_pred             EEeCCCeEEEEeeccceeeEEEecCCCC-ceEEEEeeccccceeeccccceeeeeccCCceeEecc---CCCEEEEEECC
Confidence            9999999999999999998888877765 8888887753                    4677777   68999999999


Q ss_pred             CCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec-
Q psy17682        335 HLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC-  413 (490)
Q Consensus       335 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-  413 (490)
                      ++.....+  ..|...|.+++|+|++++| ++|+.||.|++||+.+++++. .+.  .|..+|++++|+|++.++++++ 
T Consensus       236 ~~~~~~~~--~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~-~~~--~h~~~V~~~~~s~~~~~l~s~s~  309 (317)
T d1vyhc1         236 TGMCLMTL--VGHDNWVRGVLFHSGGKFI-LSCADDKTLRVWDYKNKRCMK-TLN--AHEHFVTSLDFHKTAPYVVTGSV  309 (317)
T ss_dssp             TTEEEEEE--ECCSSCEEEEEECSSSSCE-EEEETTTEEEEECCTTSCCCE-EEE--CCSSCEEEEEECSSSSCEEEEET
T ss_pred             CCcEEEEE--eCCCCCEEEEEECCCCCEE-EEEECCCeEEEEECCCCcEEE-EEc--CCCCCEEEEEEcCCCCEEEEEeC
Confidence            76533222  3567789999999999998 789999999999999987432 222  3457899999999999888874 


Q ss_pred             -ceeEEEE
Q psy17682        414 -EIGRFFR  420 (490)
Q Consensus       414 -~~~~~~~  420 (490)
                       +.+++|+
T Consensus       310 Dg~i~iWd  317 (317)
T d1vyhc1         310 DQTVKVWE  317 (317)
T ss_dssp             TSEEEEEC
T ss_pred             CCeEEEeC
Confidence             4778885

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.5e-37  Score=287.66  Aligned_cols=250  Identities=14%  Similarity=0.131  Sum_probs=201.3

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC--C
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS--D  237 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--d  237 (490)
                      .+.+|.+.|++++|+|+| ++|++|+.||+|++||+.+++....     ..+..|..+|.+++|+|++. +|++++.  +
T Consensus        53 ~~~~H~~~v~~~~~sp~g-~~latg~~dg~i~iwd~~~~~~~~~-----~~~~~~~~~v~~v~~s~d~~-~l~~~~~~~~  125 (311)
T d1nr0a1          53 IYTEHSHQTTVAKTSPSG-YYCASGDVHGNVRIWDTTQTTHILK-----TTIPVFSGPVKDISWDSESK-RIAAVGEGRE  125 (311)
T ss_dssp             EECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEESSSTTCCEE-----EEEECSSSCEEEEEECTTSC-EEEEEECCSS
T ss_pred             EEcCCCCCEEEEEEeCCC-CeEeccccCceEeeeeeeccccccc-----cccccccCcccccccccccc-cccccccccc
Confidence            456899999999999998 8999999999999999988765432     22566999999999999985 7888875  4


Q ss_pred             CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCE-EEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEE
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSK-LLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIF  316 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  316 (490)
                      ..+++|++++++....+.+|...|.+++|+|++++ |++|+.|+.|++||+++++....+..|... +.++.|+|+++++
T Consensus       126 ~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~-i~~v~~~p~~~~l  204 (311)
T d1nr0a1         126 RFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKF-VHSVRYNPDGSLF  204 (311)
T ss_dssp             CSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSC-EEEEEECTTSSEE
T ss_pred             ccccccccccccccccccccccccccccccccceeeeccccccccccccccccccccccccccccc-ccccccCcccccc
Confidence            56999999999998999999999999999999875 788999999999999999998888888775 9999999999999


Q ss_pred             EEEeCCCceeEEEEecCCCCCCCeEEE-----eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeee
Q psy17682        317 TTGFSKMSERQYSLRAPDHLDEPIVMV-----ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTF  391 (490)
Q Consensus       317 ~~~~~~~~~~~i~iwd~~~~~~~~~~~-----~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~  391 (490)
                      ++++   .|+.+++||...........     ...|...|.+++|+|++++| ++|+.||.|+|||+++++. .+.+...
T Consensus       205 ~~~~---~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l-~tgs~Dg~v~iwd~~t~~~-~~~l~~~  279 (311)
T d1nr0a1         205 ASTG---GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKI-ASASADKTIKIWNVATLKV-EKTIPVG  279 (311)
T ss_dssp             EEEE---TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTTEE-EEEEECC
T ss_pred             cccc---ccccccccccccccccccccccccccccccccccccccCCCCCEE-EEEeCCCeEEEEECCCCcE-EEEEECC
Confidence            9998   68999999998765322221     12356779999999999998 7899999999999998872 2222211


Q ss_pred             e-CCCceeeEEEeeCceeEEeecceeEEEEec
Q psy17682        392 Q-TPDPQRGIGMMPKRGCDVNSCEIGRFFRLN  422 (490)
Q Consensus       392 ~-~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~  422 (490)
                      . ....+.++.|+++..+.++.++.+++|+++
T Consensus       280 ~~~~~~~~~~~~~~~~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         280 TRIEDQQLGIIWTKQALVSISANGFINFVNPE  311 (311)
T ss_dssp             SSGGGCEEEEEECSSCEEEEETTCCEEEEETT
T ss_pred             CCccceEEEEEecCCEEEEEECCCEEEEEeCC
Confidence            1 112345566666554444457799999864

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.7e-37  Score=292.08  Aligned_cols=317  Identities=16%  Similarity=0.287  Sum_probs=234.7

Q ss_pred             eeeccCC---CCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeeccc
Q psy17682         26 TYFSPRT---LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVG  102 (490)
Q Consensus        26 ~~~~~~~---~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (490)
                      ..|++..   ....+....+|.+.|+|++|+|+| .+|++|+ |++|+|||+.++....                  .+.
T Consensus        41 ~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg-~~lasg~-d~~i~iW~~~~~~~~~------------------~~~  100 (388)
T d1erja_          41 ILYNPALPREIDVELHKSLDHTSVVCCVKFSNDG-EYLATGC-NKTTQVYRVSDGSLVA------------------RLS  100 (388)
T ss_dssp             EEECTTSCCCEEEEEEEEEECSSCCCEEEECTTS-SEEEEEC-BSCEEEEETTTCCEEE------------------EEC
T ss_pred             EEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCC-CEEEEEe-CCeEEEEEecccceEe------------------eec
Confidence            3466532   233445556899999999999999 7899887 8999999998865211                  000


Q ss_pred             CCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEE
Q psy17682        103 GKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIA  182 (490)
Q Consensus       103 ~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~  182 (490)
                      .....                          .       ..         ..........+|...|.+++|+|++ ++|+
T Consensus       101 ~~~~~--------------------------~-------~~---------~~~~~~~~~~~~~~~V~~l~~s~~~-~~l~  137 (388)
T d1erja_         101 DDSAA--------------------------N-------KD---------PENLNTSSSPSSDLYIRSVCFSPDG-KFLA  137 (388)
T ss_dssp             C-----------------------------------------------------------CCCCBEEEEEECTTS-SEEE
T ss_pred             ccccc--------------------------c-------cc---------ccccccccccCCCCCEEEEEECCCC-Ccce
Confidence            00000                          0       00         0000111235789999999999988 8999


Q ss_pred             EEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEE
Q psy17682        183 SGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVY  262 (490)
Q Consensus       183 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~  262 (490)
                      +|+.||.|++|+...++....       ..+|...|.++.|++++. .+++++.++.+++||.++.........+.. ..
T Consensus       138 s~~~dg~v~i~~~~~~~~~~~-------~~~h~~~v~~~~~~~~~~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~  208 (388)
T d1erja_         138 TGAEDRLIRIWDIENRKIVMI-------LQGHEQDIYSLDYFPSGD-KLVSGSGDRTVRIWDLRTGQCSLTLSIEDG-VT  208 (388)
T ss_dssp             EEETTSCEEEEETTTTEEEEE-------ECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEECSSC-EE
T ss_pred             ecccccccccccccccccccc-------cccccccccccccccccc-cccccccceeeeeeeccccccccccccccc-cc
Confidence            999999999999988765544       456999999999999985 899999999999999999888877775544 45


Q ss_pred             EEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeeeee-------ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCC
Q psy17682        263 SASWNW-DGSKLLTTCKDKKMRIINPRTGAIEEEAV-------CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPD  334 (490)
Q Consensus       263 ~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~  334 (490)
                      ++.+++ ++++|++++.|+.|++||.+++.....+.       +|.. .+.+++|+|++++|++++   .|+.|++||++
T Consensus       209 ~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~s~~~~~l~s~~---~d~~i~iwd~~  284 (388)
T d1erja_         209 TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD-SVYSVVFTRDGQSVVSGS---LDRSVKLWNLQ  284 (388)
T ss_dssp             EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSS-CEEEEEECTTSSEEEEEE---TTSEEEEEEC-
T ss_pred             cccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCC-CEEEEEECCCCCEEEEEE---CCCcEEEEecc
Confidence            555555 88999999999999999999988776654       3444 499999999999999998   68999999998


Q ss_pred             CCCCCe----------EEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEE--
Q psy17682        335 HLDEPI----------VMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGM--  402 (490)
Q Consensus       335 ~~~~~~----------~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~--  402 (490)
                      ......          ......|...|.+++|+|++++| ++|+.||.|++||+.+++++. .+.  .|...|.++++  
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~sg~~dg~i~vwd~~~~~~~~-~l~--~H~~~V~~~~~~~  360 (388)
T d1erja_         285 NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYI-LSGSKDRGVLFWDKKSGNPLL-MLQ--GHRNSVISVAVAN  360 (388)
T ss_dssp             --------------CEEEEEECCSSCEEEEEECGGGCEE-EEEETTSEEEEEETTTCCEEE-EEE--CCSSCEEEEEECS
T ss_pred             CCccccccccccccceeeecccccceEEEEEECCCCCEE-EEEeCCCEEEEEECCCCcEEE-EEe--CCCCCEEEEEEec
Confidence            654321          22233566789999999999998 789999999999999988332 222  34568888864  


Q ss_pred             ----eeCceeEEee--cceeEEEEec
Q psy17682        403 ----MPKRGCDVNS--CEIGRFFRLN  422 (490)
Q Consensus       403 ----sp~~~~l~~~--~~~~~~~~~~  422 (490)
                          +|++.+++++  ++.+++|++.
T Consensus       361 ~~~~spd~~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         361 GSSLGPEYNVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             SCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred             CcccCCCCCEEEEEeCCCEEEEEeee
Confidence                6788998887  4588999975

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.6e-36  Score=282.40  Aligned_cols=293  Identities=15%  Similarity=0.197  Sum_probs=245.6

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      ..+..+|.||.+.|++++|+|++ .+|+|||.||+|+|||+.++.                                   
T Consensus        45 ~~~~~tL~GH~~~I~~l~~s~~~-~~l~sgs~Dg~v~iWd~~~~~-----------------------------------   88 (340)
T d1tbga_          45 MRTRRTLRGHLAKIYAMHWGTDS-RLLVSASQDGKLIIWDSYTTN-----------------------------------   88 (340)
T ss_dssp             CCEEEEECCCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTTTE-----------------------------------
T ss_pred             eeeeEEECCCCCCEEEEEECCCC-CEEEEEECCCceeeeecccce-----------------------------------
Confidence            45677899999999999999999 899999999999999998743                                   


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                                                                 ....+.+|..+|.+++|+|++ .++++|+.|+.+++|
T Consensus        89 -------------------------------------------~~~~~~~~~~~v~~v~~~~~~-~~l~~~~~d~~i~~~  124 (340)
T d1tbga_          89 -------------------------------------------KVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIY  124 (340)
T ss_dssp             -------------------------------------------EEEEEECSCSCEEEEEECTTS-SEEEEEETTCCEEEE
T ss_pred             -------------------------------------------eEEEEecccccEEeeEeeccc-eeeeeecccceeecc
Confidence                                                       111345789999999999998 899999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  273 (490)
                      +........   .....+.+|.............  .+.....+.....+.............+...+....+.+.+.++
T Consensus       125 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (340)
T d1tbga_         125 NLKTREGNV---RVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF  199 (340)
T ss_dssp             ESSSSCSCC---CEEEEECCCSSCEEEEEEEETT--EEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred             ccccccccc---ccceeccccccccccccccccc--ccccccccccccccccccccccccccccceeEeeecccccccee
Confidence            987655433   2233456677777776666654  68888899999999998888777777788899999999999999


Q ss_pred             EEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceee
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMF  353 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~  353 (490)
                      ++++.|+.|++||+++++++.++.+|... +.+++|+|++.+|++|+   .|+.+++||++............+...+..
T Consensus       200 ~~~~~d~~v~i~d~~~~~~~~~~~~h~~~-i~~v~~~p~~~~l~s~s---~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~  275 (340)
T d1tbga_         200 VSGACDASAKLWDVREGMCRQTFTGHESD-INAICFFPNGNAFATGS---DDATCRLFDLRADQELMTYSHDNIICGITS  275 (340)
T ss_dssp             EEEETTTEEEEEETTTTEEEEEECCCSSC-EEEEEECTTSSEEEEEE---TTSCEEEEETTTTEEEEEECCTTCCSCEEE
T ss_pred             EEeecCceEEEEECCCCcEEEEEeCCCCC-eEEEEECCCCCEEEEEe---CCCeEEEEeecccccccccccccccCceEE
Confidence            99999999999999999999999988875 99999999999999998   689999999997664444444456677999


Q ss_pred             eeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee-CCCceeeEEEeeCceeEEee--cceeEEEE
Q psy17682        354 PLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TPDPQRGIGMMPKRGCDVNS--CEIGRFFR  420 (490)
Q Consensus       354 ~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~i~~~~~sp~~~~l~~~--~~~~~~~~  420 (490)
                      ++|+|++++| ++|+.||.|++||+.+++.    +..+. |..+|++++|+|++.+++++  ++.+++|+
T Consensus       276 ~~~s~~~~~l-~~g~~dg~i~iwd~~~~~~----~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         276 VSFSKSGRLL-LAGYDDFNCNVWDALKADR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EEECSSSCEE-EEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEECCCCCEE-EEEECCCEEEEEECCCCcE----EEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            9999999998 7899999999999999873    33333 55789999999999998877  45778885

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.3e-36  Score=277.18  Aligned_cols=291  Identities=11%  Similarity=0.122  Sum_probs=222.5

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      .....+.||.+.|++++|+|++ .+|+|||.||+|++||+.++....                  ...    ..+...|.
T Consensus         3 ~~~~~~~GH~~~V~~l~~s~dg-~~l~s~s~Dg~v~vWd~~~~~~~~------------------~~~----~~h~~~v~   59 (299)
T d1nr0a2           3 SIDQVRYGHNKAITALSSSADG-KTLFSADAEGHINSWDISTGISNR------------------VFP----DVHATMIT   59 (299)
T ss_dssp             EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEE------------------CSS----CSCSSCEE
T ss_pred             ccceEcCCCCCCcEEEEECCCC-CEEEEEcCCCeEEEEECCCCcEEE------------------EEc----CCCCCcEE
Confidence            3467899999999999999999 899999999999999998765111                  110    11234688


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                      +++|+|+.      .+.+++.++.+++|+....     ...........|...+.+++|+|++ .++++++ ++.+++|+
T Consensus        60 ~v~~~~~g------~~~~~~~d~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~s~~g-~~~~~~~-~~~i~~~~  126 (299)
T d1nr0a2          60 GIKTTSKG------DLFTVSWDDHLKVVPAGGS-----GVDSSKAVANKLSSQPLGLAVSADG-DIAVAAC-YKHIAIYS  126 (299)
T ss_dssp             EEEECTTS------CEEEEETTTEEEEECSSSS-----SSCTTSCCEEECSSCEEEEEECTTS-SCEEEEE-SSEEEEEE
T ss_pred             EEEeeccc------eeecccceeeEEEeccCCc-----ccccccccccccccccccccccccc-ccccccc-cccccccc
Confidence            99999985      2455678999999998522     2222334456788999999999988 5666555 56899998


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEE-EEecCCCcEEEEEEcCCCCEE
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMI-QIECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l  273 (490)
                      .....  .        . .....+.+++|+|++. ++++|+.|+.|++||+++++... ....|...|.+++|+|++++|
T Consensus       127 ~~~~~--~--------~-~~~~~~~~~~~s~~~~-~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  194 (299)
T d1nr0a2         127 HGKLT--E--------V-PISYNSSCVALSNDKQ-FVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFL  194 (299)
T ss_dssp             TTEEE--E--------E-ECSSCEEEEEECTTSC-EEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred             ccccc--c--------c-cccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccc
Confidence            53211  1        1 1445678999999985 99999999999999998877543 334689999999999999999


Q ss_pred             EEEeCCCeEEEEeCCCCceeee---eeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCC-
Q psy17682        274 LTTCKDKKMRIINPRTGAIEEE---AVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSN-  349 (490)
Q Consensus       274 ~~~~~dg~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~-  349 (490)
                      ++++.|+.|++||+.++.....   +..|... +.+++|+|++.+|++|+   .|+.|++||+++...........+.. 
T Consensus       195 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~-v~~l~~s~~~~~l~sgs---~dg~i~iwd~~~~~~~~~~~~~~~~~~  270 (299)
T d1nr0a2         195 VATDQSRKVIPYSVANNFELAHTNSWTFHTAK-VACVSWSPDNVRLATGS---LDNSVIVWNMNKPSDHPIIIKGAHAMS  270 (299)
T ss_dssp             EEEETTSCEEEEEGGGTTEESCCCCCCCCSSC-EEEEEECTTSSEEEEEE---TTSCEEEEETTCTTSCCEEETTSSTTS
T ss_pred             cccccccccccccccccccccccccccccccc-cccccccccccceEEEc---CCCEEEEEECCCCCcceEEEecCCCCC
Confidence            9999999999999988765433   3456554 99999999999999998   68899999999876554444434433 


Q ss_pred             ceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        350 GVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       350 ~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      .+..+ +++++++| ++|+.|+.|++||+.
T Consensus       271 ~v~~~-~~~~~~~l-~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         271 SVNSV-IWLNETTI-VSAGQDSNIKFWNVP  298 (299)
T ss_dssp             CEEEE-EEEETTEE-EEEETTSCEEEEECC
T ss_pred             cEEEE-EECCCCEE-EEEeCCCEEEEEecc
Confidence            45555 45667787 788899999999973

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=4e-36  Score=278.04  Aligned_cols=262  Identities=15%  Similarity=0.132  Sum_probs=211.8

Q ss_pred             eeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCC
Q psy17682         26 TYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKG  105 (490)
Q Consensus        26 ~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (490)
                      ..|+.++ ......+.+|.+.|++++|+|++ .+|++|+.||+|+|||+..+...                         
T Consensus        41 ~i~~~~~-~~~~~~~~~H~~~v~~~~~sp~g-~~latg~~dg~i~iwd~~~~~~~-------------------------   93 (311)
T d1nr0a1          41 YTVPVGS-LTDTEIYTEHSHQTTVAKTSPSG-YYCASGDVHGNVRIWDTTQTTHI-------------------------   93 (311)
T ss_dssp             EEEETTC-SSCCEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEESSSTTCC-------------------------
T ss_pred             EEEECCC-CceeEEEcCCCCCEEEEEEeCCC-CeEeccccCceEeeeeeeccccc-------------------------
Confidence            3444433 35556689999999999999998 89999999999999999874410                         


Q ss_pred             CCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe
Q psy17682        106 GANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS  185 (490)
Q Consensus       106 ~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~  185 (490)
                                                                         ....+.+|.++|.+++|+|++ .++++++
T Consensus        94 ---------------------------------------------------~~~~~~~~~~~v~~v~~s~d~-~~l~~~~  121 (311)
T d1nr0a1          94 ---------------------------------------------------LKTTIPVFSGPVKDISWDSES-KRIAAVG  121 (311)
T ss_dssp             ---------------------------------------------------EEEEEECSSSCEEEEEECTTS-CEEEEEE
T ss_pred             ---------------------------------------------------cccccccccCccccccccccc-ccccccc
Confidence                                                               011346799999999999998 7888887


Q ss_pred             C--CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEE
Q psy17682        186 E--DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYS  263 (490)
Q Consensus       186 ~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~  263 (490)
                      .  +..+++|++++++....       +.+|...|++++|+|+++.+|++|+.|+.|++||+++++....+..|...|++
T Consensus       122 ~~~~~~~~v~~~~~~~~~~~-------l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~  194 (311)
T d1nr0a1         122 EGRERFGHVFLFDTGTSNGN-------LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHS  194 (311)
T ss_dssp             CCSSCSEEEEETTTCCBCBC-------CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEE
T ss_pred             cccccccccccccccccccc-------ccccccccccccccccceeeecccccccccccccccccccccccccccccccc
Confidence            5  45699999998876554       45699999999999999877999999999999999999999999999999999


Q ss_pred             EEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee-------ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC
Q psy17682        264 ASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV-------CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL  336 (490)
Q Consensus       264 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~  336 (490)
                      +.|+|++++|++++.|+.+++||+++++....+.       +|... +.+++|+|++++|++|+   .|+.|+|||++++
T Consensus       195 v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~-V~~~~~s~~~~~l~tgs---~Dg~v~iwd~~t~  270 (311)
T d1nr0a1         195 VRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGS-VFGLTWSPDGTKIASAS---ADKTIKIWNVATL  270 (311)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSC-EEEEEECTTSSEEEEEE---TTSEEEEEETTTT
T ss_pred             cccCcccccccccccccccccccccccccccccccccccccccccc-ccccccCCCCCEEEEEe---CCCeEEEEECCCC
Confidence            9999999999999999999999999988776664       34554 99999999999999998   6899999999887


Q ss_pred             CCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        337 DEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       337 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      +....+. .++......+.+.++++.| ++++.||.|++||.+
T Consensus       271 ~~~~~l~-~~~~~~~~~~~~~~~~~~l-~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         271 KVEKTIP-VGTRIEDQQLGIIWTKQAL-VSISANGFINFVNPE  311 (311)
T ss_dssp             EEEEEEE-CCSSGGGCEEEEEECSSCE-EEEETTCCEEEEETT
T ss_pred             cEEEEEE-CCCCccceEEEEEecCCEE-EEEECCCEEEEEeCC
Confidence            5333222 1222222333444556677 678899999999963

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.2e-35  Score=282.21  Aligned_cols=289  Identities=13%  Similarity=0.130  Sum_probs=220.9

Q ss_pred             ccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccc
Q psy17682         43 HQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDY  122 (490)
Q Consensus        43 H~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  122 (490)
                      +.++|+|++|+|++ .+||+|+.||.|+|||+.++++                                           
T Consensus         6 ~~~pIt~~~~s~dg-~~la~~~~~~~i~iw~~~~~~~-------------------------------------------   41 (371)
T d1k8kc_           6 LVEPISCHAWNKDR-TQIAICPNNHEVHIYEKSGNKW-------------------------------------------   41 (371)
T ss_dssp             CSSCCCEEEECTTS-SEEEEECSSSEEEEEEEETTEE-------------------------------------------
T ss_pred             CCCCeEEEEECCCC-CEEEEEeCCCEEEEEECCCCCE-------------------------------------------
Confidence            44789999999999 8999999999999999865320                                           


Q ss_pred             ccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccc
Q psy17682        123 VKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISR  202 (490)
Q Consensus       123 ~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~  202 (490)
                                                       ..+..+++|.++|.+++|+|++ ++|++|+.|++|++||+.++....
T Consensus        42 ---------------------------------~~~~~l~gH~~~V~~l~fsp~~-~~l~s~s~D~~i~vWd~~~~~~~~   87 (371)
T d1k8kc_          42 ---------------------------------VQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAYVWTLKGRTWKP   87 (371)
T ss_dssp             ---------------------------------EEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEEEETTEEEE
T ss_pred             ---------------------------------EEEEEecCCCCCEEEEEECCCC-CEEEEEECCCeEEEEeeccccccc
Confidence                                             0122467899999999999988 899999999999999997665432


Q ss_pred             ccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeE----EEEecCCCcEEEEEEcCCCCEEEEEeC
Q psy17682        203 TLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIM----IQIECHPDIVYSASWNWDGSKLLTTCK  278 (490)
Q Consensus       203 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~  278 (490)
                      .     ..+.+|...|.+++|+|+++ .|++++.|+.|++|++......    .....|...|.+++|+|++++|++++.
T Consensus        88 ~-----~~~~~~~~~v~~i~~~p~~~-~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~  161 (371)
T d1k8kc_          88 T-----LVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC  161 (371)
T ss_dssp             E-----EECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred             c-----cccccccccccccccccccc-cceeecccCcceeeeeecccccccccccccccccccccccccccccceecccc
Confidence            2     23556889999999999985 9999999999999998765432    233468899999999999999999999


Q ss_pred             CCeEEEEeCCCCc------------------eeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe
Q psy17682        279 DKKMRIINPRTGA------------------IEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI  340 (490)
Q Consensus       279 dg~i~iwd~~~~~------------------~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~  340 (490)
                      |+++++||.....                  .......|... +.+++|+|+|++|++++   .|+.|++||+.+.....
T Consensus       162 D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~g~~l~s~~---~d~~i~iwd~~~~~~~~  237 (371)
T d1k8kc_         162 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW-VHGVCFSANGSRVAWVS---HDSTVCLADADKKMAVA  237 (371)
T ss_dssp             TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC-EEEEEECSSSSEEEEEE---TTTEEEEEEGGGTTEEE
T ss_pred             CcEEEEEeeccCccccccccccccccccceeeeeeccCccCc-EEEEEeecccccccccc---cCCcceEEeeeccccee
Confidence            9999999986532                  23333455554 89999999999999998   68999999998765332


Q ss_pred             EEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee------------------------------
Q psy17682        341 VMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT------------------------------  390 (490)
Q Consensus       341 ~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~------------------------------  390 (490)
                      .  ...+..+|.+++|+|++++| ++| .|+.+++|..............                              
T Consensus       238 ~--~~~~~~~v~s~~fs~d~~~l-a~g-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (371)
T d1k8kc_         238 T--LASETLPLLAVTFITESSLV-AAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGS  313 (371)
T ss_dssp             E--EECSSCCEEEEEEEETTEEE-EEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC-----
T ss_pred             e--eecccccceeeeecCCCCEE-EEE-cCCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEecc
Confidence            2  23456789999999999877 665 4777777766543211111000                              


Q ss_pred             --------eeCCCceeeEEEeeCce----eEEee--cceeEEEEecC
Q psy17682        391 --------FQTPDPQRGIGMMPKRG----CDVNS--CEIGRFFRLNN  423 (490)
Q Consensus       391 --------~~~~~~i~~~~~sp~~~----~l~~~--~~~~~~~~~~~  423 (490)
                              ..|...|+++++.|.+.    .++++  ++.+++|++.+
T Consensus       314 ~~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~  360 (371)
T d1k8kc_         314 AAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS  360 (371)
T ss_dssp             ----CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred             ccccceecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCc
Confidence                    01445789999998652    34454  56889999865

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-34  Score=267.18  Aligned_cols=247  Identities=16%  Similarity=0.206  Sum_probs=211.7

Q ss_pred             cEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         36 PVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        36 ~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      ......+|.+.|.+++|+|++ .+|++|+.||+|++||+.....                                    
T Consensus        89 ~~~~~~~h~~~I~~v~~s~dg-~~l~s~~~dg~i~iwd~~~~~~------------------------------------  131 (337)
T d1gxra_          89 SQLDCLNRDNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAAPTP------------------------------------  131 (337)
T ss_dssp             EEEECSCTTSBEEEEEECTTS-SEEEEEESSSEEEEEECCCC--------------------------------------
T ss_pred             EEeeecCCCCcEEEEEEcCCC-CEEEEeeccccccccccccccc------------------------------------
Confidence            344567899999999999999 8999999999999999875320                                    


Q ss_pred             eEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEEC
Q psy17682        116 ITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQI  195 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~  195 (490)
                                                              .....+.+|...|.+++|+|++ .++++++.|+.|++|++
T Consensus       132 ----------------------------------------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~~~~  170 (337)
T d1gxra_         132 ----------------------------------------RIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDL  170 (337)
T ss_dssp             ----------------------------------------EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEET
T ss_pred             ----------------------------------------cccccccccccccccccccccc-ccccccccccccccccc
Confidence                                                    0011345788999999999988 89999999999999999


Q ss_pred             CCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEE
Q psy17682        196 PDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLT  275 (490)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  275 (490)
                      .+++....       ..+|...|.+++|++++. .+++++.|+.|++||+++++.+..+. |...|.+++|+|++++|++
T Consensus       171 ~~~~~~~~-------~~~~~~~v~~l~~s~~~~-~~~~~~~d~~v~i~d~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~  241 (337)
T d1gxra_         171 HNQTLVRQ-------FQGHTDGASCIDISNDGT-KLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAV  241 (337)
T ss_dssp             TTTEEEEE-------ECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEE
T ss_pred             cccccccc-------cccccccccccccccccc-ccccccccccccccccccceeecccc-cccceEEEEEcccccccce
Confidence            88765443       445899999999999985 89999999999999999999888776 8899999999999999999


Q ss_pred             EeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeee
Q psy17682        276 TCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPL  355 (490)
Q Consensus       276 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~  355 (490)
                      ++.|+.+++||+++++... ...|... +.+++|+|++++|++++   .|+.|++||..+++.   +....+...|.+++
T Consensus       242 ~~~d~~i~i~d~~~~~~~~-~~~~~~~-i~~v~~s~~g~~l~s~s---~Dg~i~iwd~~~~~~---~~~~~~~~~v~~~~  313 (337)
T d1gxra_         242 GMESSNVEVLHVNKPDKYQ-LHLHESC-VLSLKFAYCGKWFVSTG---KDNLLNAWRTPYGAS---IFQSKESSSVLSCD  313 (337)
T ss_dssp             EETTSCEEEEETTSSCEEE-ECCCSSC-EEEEEECTTSSEEEEEE---TTSEEEEEETTTCCE---EEEEECSSCEEEEE
T ss_pred             ecccccccccccccccccc-ccccccc-cceEEECCCCCEEEEEe---CCCeEEEEECCCCCE---EEEccCCCCEEEEE
Confidence            9999999999999887654 4456654 99999999999999998   689999999998763   33445778899999


Q ss_pred             ecCCCCeEEEEecCCCeEEEEEe
Q psy17682        356 YDPDTNLVYLCGKGDSVIRYFEI  378 (490)
Q Consensus       356 ~s~~~~~l~~~g~~dg~i~iwd~  378 (490)
                      |+|++++| ++|+.||.|+|||+
T Consensus       314 ~s~d~~~l-~t~s~D~~I~vWdl  335 (337)
T d1gxra_         314 ISVDDKYI-VTGSGDKKATVYEV  335 (337)
T ss_dssp             ECTTSCEE-EEEETTSCEEEEEE
T ss_pred             EeCCCCEE-EEEeCCCeEEEEEE
Confidence            99999998 78999999999997

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.9e-33  Score=262.66  Aligned_cols=331  Identities=12%  Similarity=0.141  Sum_probs=236.6

Q ss_pred             CcEEeccccccee-eeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         35 EPVVDLLYHQRRV-GLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        35 ~~~~~l~gH~~~V-~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      ++..+|+||.+.| +|+.|  ++ ++|+||+.||+|+|||+.+++.                  ...+.     .+...|
T Consensus         3 p~~~tL~GH~~~vitc~~~--~~-~~l~tgs~Dg~i~vWd~~~~~~------------------~~~l~-----~H~~~V   56 (355)
T d1nexb2           3 PQRTTLRGHMTSVITCLQF--ED-NYVITGADDKMIRVYDSINKKF------------------LLQLS-----GHDGGV   56 (355)
T ss_dssp             CEEEEEECCSSSCEEEEEE--ET-TEEEEEETTTEEEEEETTTTEE------------------EEEEE-----CCSSCE
T ss_pred             CCcEEECCcCCCcEEEEEE--CC-CEEEEEeCCCeEEEEECCCCcE------------------EEEEE-----CCCCCE
Confidence            4467899999886 66655  45 7999999999999999987641                  11111     123468


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                      .+++|+++.      .+++++.|+.+++|+..    .....  .......+...+..+.+++++ .++++++.|+.|++|
T Consensus        57 ~~l~~s~~~------~l~s~s~D~~i~iw~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~i~iw  123 (355)
T d1nexb2          57 WALKYAHGG------ILVSGSTDRTVRVWDIK----KGCCT--HVFEGHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVW  123 (355)
T ss_dssp             EEEEEETTT------EEEEEETTCCEEEEETT----TTEEE--EEECCCSSCEEEEEEEEETTE-EEEEEEETTSEEEEE
T ss_pred             EEEEEcCCC------EEEEEeccccccccccc----ccccc--ccccccccccccccccccccc-ceeeeecCCCcEEEE
Confidence            899999874      57789999999999986    11110  011112333445566778877 899999999999999


Q ss_pred             ECCCCCccccccc----------------ceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecC
Q psy17682        194 QIPDGGISRTLTE----------------PVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH  257 (490)
Q Consensus       194 d~~~~~~~~~~~~----------------~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~  257 (490)
                      ++.+.........                .......|...+..  +.+++ ++++++..|+.|++||+++++.+....++
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~-~~~~~~~~d~~i~~~d~~~~~~~~~~~~~  200 (355)
T d1nexb2         124 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT--VSGHG-NIVVSGSYDNTLIVWDVAQMKCLYILSGH  200 (355)
T ss_dssp             ECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEE--EEEET-TEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred             EccCCceeccccccceeccceeccccccceeeeeeeccccccc--ccccc-ceeeeecccceeeeeecccccceeeeecc
Confidence            9987654332211                11112224444443  45556 48999999999999999999999999889


Q ss_pred             CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCC
Q psy17682        258 PDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLD  337 (490)
Q Consensus       258 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~  337 (490)
                      ...+.++.++|+++.+++++.|+.|++||++++..+..+.+|... +.++.++  +++|++|+   .|+.|++||+++..
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~-v~~~~~~--~~~l~~~~---~dg~i~iwd~~~~~  274 (355)
T d1nexb2         201 TDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL-VGLLRLS--DKFLVSAA---ADGSIRGWDANDYS  274 (355)
T ss_dssp             SSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSC-CCEEEEC--SSEEEEEC---TTSEEEEEETTTCC
T ss_pred             ccccccccccccceeeecccccceEEeeecccccccccccccccc-ccccccc--cceeeeee---cccccccccccccc
Confidence            999999999999999999999999999999999999999988875 8888886  46888888   68999999998765


Q ss_pred             CCeEEEeccCCCceee-eeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cc
Q psy17682        338 EPIVMVELDTSNGVMF-PLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CE  414 (490)
Q Consensus       338 ~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~  414 (490)
                      ..   ...++ ..+.. ..++++++++ ++| .|+.|++||+++++.+...+  ..+..+|.+++|+|+. +++++  ++
T Consensus       275 ~~---~~~~~-~~~~~~~~~~~~~~~l-~~g-~d~~i~vwd~~tg~~~~~~~--~~~~~~V~~v~~~~~~-~~~~~s~dg  345 (355)
T d1nexb2         275 RK---FSYHH-TNLSAITTFYVSDNIL-VSG-SENQFNIYNLRSGKLVHANI--LKDADQIWSVNFKGKT-LVAAVEKDG  345 (355)
T ss_dssp             EE---EEEEC-TTCCCCCEEEECSSEE-EEE-ETTEEEEEETTTCCBCCSCT--TTTCSEEEEEEEETTE-EEEEEESSS
T ss_pred             ee---ccccc-CCceEEEEEcCCCCEE-EEE-eCCEEEEEECCCCCEEEEEe--cCCCCCEEEEEEcCCe-EEEEEECCC
Confidence            32   22233 34444 4567777665 555 58999999999987432222  2355789999999985 44444  34


Q ss_pred             eeEEEEec
Q psy17682        415 IGRFFRLN  422 (490)
Q Consensus       415 ~~~~~~~~  422 (490)
                      .+.+|.++
T Consensus       346 ~~~l~~~d  353 (355)
T d1nexb2         346 QSFLEILD  353 (355)
T ss_dssp             CEEEEEEE
T ss_pred             cEEEEEEe
Confidence            44566553

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-31  Score=249.63  Aligned_cols=325  Identities=14%  Similarity=0.155  Sum_probs=237.4

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      ++..+|+||.+.|.+ ++++++ ++|+|||.||+|+|||+.+++.                  ...+.     .+...|.
T Consensus         7 ~~~~~l~GH~~~V~s-~~~~~g-~~l~sgs~Dg~i~vWd~~~~~~------------------~~~~~-----~h~~~V~   61 (342)
T d2ovrb2           7 KSPKVLKGHDDHVIT-CLQFCG-NRIVSGSDDNTLKVWSAVTGKC------------------LRTLV-----GHTGGVW   61 (342)
T ss_dssp             CCCEEEECSTTSCEE-EEEEET-TEEEEEETTSCEEEEETTTCCE------------------EEECC-----CCSSCEE
T ss_pred             CcCEEECCcCCceEE-EEEECC-CEEEEEeCCCeEEEEECCCCCE------------------EEEEe-----CCCCCEE
Confidence            566789999999865 466677 8999999999999999988652                  11111     1234678


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                      +++++++       .+++++.++.+++|+..    ..    ........+...+......+   ..++.+..|+.+.+|+
T Consensus        62 ~v~~~~~-------~l~s~s~D~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~i~~~~  123 (342)
T d2ovrb2          62 SSQMRDN-------IIISGSTDRTLKVWNAE----TG----ECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWD  123 (342)
T ss_dssp             EEEEETT-------EEEEEETTSCEEEEETT----TT----EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEE
T ss_pred             EEEeCCC-------ccccceecccccccccc----cc----cceecccccceeEeeeeccc---ccccccccceeEEEee
Confidence            8999876       57889999999999985    11    12223344555666666553   5788899999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEE
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLL  274 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  274 (490)
                      ..+++....+.       .+....  ....+.. ..+++++.|+.|++||.+..+.+..+.+|...+..+.+  ++.+++
T Consensus       124 ~~~~~~~~~~~-------~~~~~~--~~~~~~~-~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~l~  191 (342)
T d2ovrb2         124 IETGQCLHVLM-------GHVAAV--RCVQYDG-RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVV  191 (342)
T ss_dssp             SSSCCEEEEEE-------CCSSCE--EEEEECS-SCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEE
T ss_pred             cccccceeeee-------cccccc--eeecccc-ceeeeecCCCeEEEeecccceeeEEEcCcccccccccC--CCCEEE
Confidence            98887654432       122222  2334444 37889999999999999999999999988877766655  688999


Q ss_pred             EEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec-cCCCceee
Q psy17682        275 TTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-DTSNGVMF  353 (490)
Q Consensus       275 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-~~~~~i~~  353 (490)
                      +++.||.|++||++.++++..+..|... +.++.++  +.+|++|+   .|+.|++||....+........ .+...+.+
T Consensus       192 s~~~dg~i~~~d~~~~~~~~~~~~~~~~-v~~~~~~--~~~l~s~s---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~  265 (342)
T d2ovrb2         192 SGSLDTSIRVWDVETGNCIHTLTGHQSL-TSGMELK--DNILVSGN---ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTC  265 (342)
T ss_dssp             EEETTSCEEEEETTTCCEEEEECCCCSC-EEEEEEE--TTEEEEEE---TTSCEEEEETTTCCEEEEECSTTSCSSCEEE
T ss_pred             EEeCCCeEEEeecccceeeeEecccccc-eeEEecC--CCEEEEEc---CCCEEEEEecccccccccccccceeeeceee
Confidence            9999999999999999999988888764 6666665  56888888   6899999999876543333221 23344555


Q ss_pred             eeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee--eeCCCceeeEEEeeCceeEEeecc------eeEEEEecC
Q psy17682        354 PLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT--FQTPDPQRGIGMMPKRGCDVNSCE------IGRFFRLNN  423 (490)
Q Consensus       354 ~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~------~~~~~~~~~  423 (490)
                      +.++  ++++ ++|+.||.|++||+++++.+......  ..+...|++++|+|++.++++++.      .+++|+++.
T Consensus       266 ~~~~--~~~~-~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~  340 (342)
T d2ovrb2         266 LQFN--KNFV-ITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV  340 (342)
T ss_dssp             EEEC--SSEE-EEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             cccC--CCee-EEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence            5554  5566 78999999999999998843322211  124567999999999999998754      256777653

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.1e-32  Score=259.77  Aligned_cols=247  Identities=12%  Similarity=0.128  Sum_probs=198.2

Q ss_pred             ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEE
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIW  243 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iw  243 (490)
                      +.++|+|++|+|++ .+||+|+.||.|+|||+.+++...     ...+.+|.+.|.+++|+|++. +|++|+.|+.|++|
T Consensus         6 ~~~pIt~~~~s~dg-~~la~~~~~~~i~iw~~~~~~~~~-----~~~l~gH~~~V~~l~fsp~~~-~l~s~s~D~~i~vW   78 (371)
T d1k8kc_           6 LVEPISCHAWNKDR-TQIAICPNNHEVHIYEKSGNKWVQ-----VHELKEHNGQVTGVDWAPDSN-RIVTCGTDRNAYVW   78 (371)
T ss_dssp             CSSCCCEEEECTTS-SEEEEECSSSEEEEEEEETTEEEE-----EEEEECCSSCEEEEEEETTTT-EEEEEETTSCEEEE
T ss_pred             CCCCeEEEEECCCC-CEEEEEeCCCEEEEEECCCCCEEE-----EEEecCCCCCEEEEEECCCCC-EEEEEECCCeEEEE
Confidence            34789999999998 899999999999999987665322     234678999999999999985 99999999999999


Q ss_pred             ECCCCeeE--EEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeee----eecCCCceeEEEEeCCCcEEE
Q psy17682        244 NVGTGEIM--IQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEA----VCHEGSKATRAIYLKSGLIFT  317 (490)
Q Consensus       244 d~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~s~~~~~l~  317 (490)
                      |+++++..  ..+..|...|.+++|+|+++.|++++.|+++++|++.........    ..|.. .+.+++|+|++++|+
T Consensus        79 d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~-~v~~v~~~p~~~~l~  157 (371)
T d1k8kc_          79 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS-TVLSLDWHPNSVLLA  157 (371)
T ss_dssp             EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS-CEEEEEECTTSSEEE
T ss_pred             eecccccccccccccccccccccccccccccceeecccCcceeeeeeccccccccccccccccc-cccccccccccccee
Confidence            99877644  445578889999999999999999999999999998776543322    24444 489999999999999


Q ss_pred             EEeCCCceeEEEEecCCCCCC----------------CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCC
Q psy17682        318 TGFSKMSERQYSLRAPDHLDE----------------PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       318 ~~~~~~~~~~i~iwd~~~~~~----------------~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                      +|+   .|+.+++|+......                ........|...|.+++|+|+|++| ++++.|+.|++||+.++
T Consensus       158 s~s---~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~s~~~d~~i~iwd~~~~  233 (371)
T d1k8kc_         158 AGS---CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRV-AWVSHDSTVCLADADKK  233 (371)
T ss_dssp             EEE---TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEE-EEEETTTEEEEEEGGGT
T ss_pred             ccc---cCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccc-cccccCCcceEEeeecc
Confidence            998   689999999865321                1222333566679999999999998 78889999999999998


Q ss_pred             CCeeEEeeeeeCCCceeeEEEeeCceeEEeec-ceeEEEEecCCC
Q psy17682        382 PPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC-EIGRFFRLNNSG  425 (490)
Q Consensus       382 ~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~~~~~~~~~~~~  425 (490)
                      +.+. .+  ..+..+|.+++|+|++.+++++. +..++|......
T Consensus       234 ~~~~-~~--~~~~~~v~s~~fs~d~~~la~g~d~~~~~~~~~~~~  275 (371)
T d1k8kc_         234 MAVA-TL--ASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAA  275 (371)
T ss_dssp             TEEE-EE--ECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTT
T ss_pred             ccee-ee--ecccccceeeeecCCCCEEEEEcCCceEEEEeeCCC
Confidence            7332 22  23456899999999999998874 456777766544

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.6e-31  Score=254.84  Aligned_cols=284  Identities=15%  Similarity=0.217  Sum_probs=215.1

Q ss_pred             eCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccc-----
Q psy17682        133 LKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEP-----  207 (490)
Q Consensus       133 ~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----  207 (490)
                      ...++...+|+..    ........+....+|++.|+||+|+|+| ++|++|+ |++|+|||+.+++.+..+...     
T Consensus        34 ~~~~~~~~~~~~~----~~~~~~~~l~~~~~H~~~V~~l~fs~dg-~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~  107 (388)
T d1erja_          34 KQTNDYYILYNPA----LPREIDVELHKSLDHTSVVCCVKFSNDG-EYLATGC-NKTTQVYRVSDGSLVARLSDDSAANK  107 (388)
T ss_dssp             EECSSCEEEECTT----SCCCEEEEEEEEEECSSCCCEEEECTTS-SEEEEEC-BSCEEEEETTTCCEEEEECC------
T ss_pred             cCCCCcEEEeCCC----CCcceeeeeEeeCCCCCcEEEEEECCCC-CEEEEEe-CCeEEEEEecccceEeeecccccccc
Confidence            4556677788764    2222111222334799999999999998 8999986 899999999988876654321     


Q ss_pred             ------eeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCe
Q psy17682        208 ------VVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKK  281 (490)
Q Consensus       208 ------~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  281 (490)
                            ......|...|++++|+|++. +|++|+.||.|++||...++.+..+.+|...|.++++++++..+++++.++.
T Consensus       108 ~~~~~~~~~~~~~~~~V~~l~~s~~~~-~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~  186 (388)
T d1erja_         108 DPENLNTSSSPSSDLYIRSVCFSPDGK-FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT  186 (388)
T ss_dssp             -----------CCCCBEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred             cccccccccccCCCCCEEEEEECCCCC-cceeccccccccccccccccccccccccccccccccccccccccccccccee
Confidence                  112345788899999999985 9999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEE-----eccCCCceeeeee
Q psy17682        282 MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMV-----ELDTSNGVMFPLY  356 (490)
Q Consensus       282 i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~-----~~~~~~~i~~~~~  356 (490)
                      +++||.++.........+.. ......+.+++.+|++|+   .++.|++||..+........     ...|...|.+++|
T Consensus       187 i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~---~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~  262 (388)
T d1erja_         187 VRIWDLRTGQCSLTLSIEDG-VTTVAVSPGDGKYIAAGS---LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF  262 (388)
T ss_dssp             EEEEETTTTEEEEEEECSSC-EEEEEECSTTCCEEEEEE---TTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEE
T ss_pred             eeeeeccccccccccccccc-cccccccCCCCCeEEEEc---CCCeEEEeecccCccceeeccccccccCCCCCEEEEEE
Confidence            99999998887776665443 244444455789999998   68899999998765432221     1245677999999


Q ss_pred             cCCCCeEEEEecCCCeEEEEEecCCCCee---------EEeeeeeCCCceeeEEEeeCceeEEeec--ceeEEEEecCCC
Q psy17682        357 DPDTNLVYLCGKGDSVIRYFEITAEPPFV---------HYINTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFRLNNSG  425 (490)
Q Consensus       357 s~~~~~l~~~g~~dg~i~iwd~~~~~~~~---------~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~~~~  425 (490)
                      +|++++| ++|+.||.|++||+.+++...         .......+...|.+++|+|++.++++++  +.+++|++.+++
T Consensus       263 s~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~  341 (388)
T d1erja_         263 TRDGQSV-VSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN  341 (388)
T ss_dssp             CTTSSEE-EEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC
T ss_pred             CCCCCEE-EEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence            9999998 789999999999998754221         1122233557899999999999988874  578999999887


Q ss_pred             ceE
Q psy17682        426 LCQ  428 (490)
Q Consensus       426 ~~~  428 (490)
                      .+.
T Consensus       342 ~~~  344 (388)
T d1erja_         342 PLL  344 (388)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            433

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4e-32  Score=252.83  Aligned_cols=296  Identities=13%  Similarity=0.089  Sum_probs=212.5

Q ss_pred             eeeeEEeccCCCceEEeeeC-CCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEecccccc
Q psy17682         46 RVGLVLWHPTAQNVLLTAGK-EAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVK  124 (490)
Q Consensus        46 ~V~~v~~~p~~~~~l~s~~~-D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  124 (490)
                      .+++++|+|++ +.|+.++. ...|+.|+........               .....++     ....+++++|+|....
T Consensus        19 ~~t~l~~~~~~-~~la~~~~~~~~i~~~~~~~~~~~~---------------~~~~~gh-----~~~~v~~v~fsP~~~g   77 (325)
T d1pgua1          19 FTTHLSYDPTT-NAIAYPCGKSAFVRCLDDGDSKVPP---------------VVQFTGH-----GSSVVTTVKFSPIKGS   77 (325)
T ss_dssp             CCCCCEEETTT-TEEEEEETTEEEEEECCSSCCSSCS---------------EEEECTT-----TTSCEEEEEECSSTTC
T ss_pred             CeEEEEECCCC-CEEEEEeCCCEEEEEEeCCCCCccc---------------eEEEeCC-----CCCCEEEEEEeeCCCC
Confidence            46899999999 55665544 3456667654433111               1111111     1235889999986433


Q ss_pred             ceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe--CCCcEEEEECCCCCccc
Q psy17682        125 EFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS--EDCVVKVWQIPDGGISR  202 (490)
Q Consensus       125 ~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~~  202 (490)
                      .   ++++++.+|.|++|+.................+..|.++|.+++|+|++ .++++++  .++.+++|+.++++.+.
T Consensus        78 ~---~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~  153 (325)
T d1pgua1          78 Q---YLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEG-RRLCVVGEGRDNFGVFISWDSGNSLG  153 (325)
T ss_dssp             C---EEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEECCSSCSEEEEETTTCCEEE
T ss_pred             C---EEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCC-CccceeeccccceEEEEeecccccce
Confidence            3   5778999999999988511100000001122356789999999999998 6776665  46789999998887655


Q ss_pred             ccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe---cCCCcEEEEEEcCC-CCEEEEEeC
Q psy17682        203 TLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE---CHPDIVYSASWNWD-GSKLLTTCK  278 (490)
Q Consensus       203 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---~~~~~v~~~~~~~~-~~~l~~~~~  278 (490)
                      .       +.+|...|.+++|+|+++.++++++.|+.+++||+...+....+.   .|...|.+++|+|+ +.+|++++.
T Consensus       154 ~-------~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~  226 (325)
T d1pgua1         154 E-------VSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS  226 (325)
T ss_dssp             E-------CCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET
T ss_pred             e-------eeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceecccccc
Confidence            4       446999999999999987778899999999999999887666654   56778999999996 588999999


Q ss_pred             CCeEEEEeCCCCceeeeeeecCCCceeEEEEe---CCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeee
Q psy17682        279 DKKMRIINPRTGAIEEEAVCHEGSKATRAIYL---KSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPL  355 (490)
Q Consensus       279 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s---~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~  355 (490)
                      |+.|++||+++++.+..+.+|... +..+.|+   |+|++|++++   .|+.|+|||+++++.........+...+..++
T Consensus       227 d~~i~iwd~~~~~~~~~l~~~~~~-v~~~~~s~~~~dg~~l~s~s---~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  302 (325)
T d1pgua1         227 DRKISCFDGKSGEFLKYIEDDQEP-VQGGIFALSWLDSQKFATVG---ADATIRVWDVTTSKCVQKWTLDKQQLGNQQVG  302 (325)
T ss_dssp             TCCEEEEETTTCCEEEECCBTTBC-CCSCEEEEEESSSSEEEEEE---TTSEEEEEETTTTEEEEEEECCTTCGGGCEEE
T ss_pred             ccceeeeeeccccccccccccccc-cccceeeeeccCCCEEEEEe---CCCeEEEEECCCCCEEEEEEecCCcccCeEEE
Confidence            999999999999999998877764 5444444   7888999998   68999999999866433333333333344444


Q ss_pred             ecCCCC-eEEEEecCCCeEEEEEe
Q psy17682        356 YDPDTN-LVYLCGKGDSVIRYFEI  378 (490)
Q Consensus       356 ~s~~~~-~l~~~g~~dg~i~iwd~  378 (490)
                      +.+.++ +| ++++.||.|++||+
T Consensus       303 ~~~~~~~~l-~s~s~dg~i~vwdl  325 (325)
T d1pgua1         303 VVATGNGRI-ISLSLDGTLNFYEL  325 (325)
T ss_dssp             EEEEETTEE-EEEETTSCEEEEET
T ss_pred             EEECCCCEE-EEEECCCEEEEEEC
Confidence            444433 45 78999999999995

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.2e-31  Score=246.28  Aligned_cols=250  Identities=12%  Similarity=0.115  Sum_probs=190.3

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      .+++.||.++|++++|+|++ ++|+||+.||+|++||+++++..+.+.      .+|...|++++|+|++.  +++++.|
T Consensus         5 ~~~~~GH~~~V~~l~~s~dg-~~l~s~s~Dg~v~vWd~~~~~~~~~~~------~~h~~~v~~v~~~~~g~--~~~~~~d   75 (299)
T d1nr0a2           5 DQVRYGHNKAITALSSSADG-KTLFSADAEGHINSWDISTGISNRVFP------DVHATMITGIKTTSKGD--LFTVSWD   75 (299)
T ss_dssp             EEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEECSS------CSCSSCEEEEEECTTSC--EEEEETT
T ss_pred             ceEcCCCCCCcEEEEECCCC-CEEEEEcCCCeEEEEECCCCcEEEEEc------CCCCCcEEEEEeeccce--eecccce
Confidence            45788999999999999998 899999999999999999988766543      35889999999999984  5677789


Q ss_pred             CcEEEEECCCCe--------------e-------------------EEEE-------ecCCCcEEEEEEcCCCCEEEEEe
Q psy17682        238 NNVAIWNVGTGE--------------I-------------------MIQI-------ECHPDIVYSASWNWDGSKLLTTC  277 (490)
Q Consensus       238 g~v~iwd~~~~~--------------~-------------------~~~~-------~~~~~~v~~~~~~~~~~~l~~~~  277 (490)
                      +.+++|+.....              .                   +..+       ......+.+++|+|++++|++++
T Consensus        76 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~  155 (299)
T d1nr0a2          76 DHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGG  155 (299)
T ss_dssp             TEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEE
T ss_pred             eeEEEeccCCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999864311              0                   0000       01334578899999999999999


Q ss_pred             CCCeEEEEeCCCCceeeee-eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe-ccCCCceeeee
Q psy17682        278 KDKKMRIINPRTGAIEEEA-VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE-LDTSNGVMFPL  355 (490)
Q Consensus       278 ~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~-~~~~~~i~~~~  355 (490)
                      .||.|++||+++++..... ..|.. .+.+++|+|++.+|++++   .++.+++||+.+......... ..|...|.+++
T Consensus       156 ~dg~i~~~d~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~---~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~  231 (299)
T d1nr0a2         156 QDSKVHVYKLSGASVSEVKTIVHPA-EITSVAFSNNGAFLVATD---QSRKVIPYSVANNFELAHTNSWTFHTAKVACVS  231 (299)
T ss_dssp             TTSEEEEEEEETTEEEEEEEEECSS-CEEEEEECTTSSEEEEEE---TTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEE
T ss_pred             ccccccccccccccccccccccccc-cccccccccccccccccc---ccccccccccccccccccccccccccccccccc
Confidence            9999999999887755433 35555 499999999999999998   688999999886543222222 24567899999


Q ss_pred             ecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEec
Q psy17682        356 YDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLN  422 (490)
Q Consensus       356 ~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~  422 (490)
                      |+|++++| ++|+.||.|++||+.++...........+...+..+.|.+++ +++++  ++.+++|++.
T Consensus       232 ~s~~~~~l-~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         232 WSPDNVRL-ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNET-TIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             ECTTSSEE-EEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETT-EEEEEETTSCEEEEECC
T ss_pred             ccccccce-EEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEECCCC-EEEEEeCCCEEEEEecc
Confidence            99999998 789999999999999875332222222233567777666554 55554  4589999974

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-30  Score=240.29  Aligned_cols=257  Identities=18%  Similarity=0.249  Sum_probs=221.7

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK  104 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (490)
                      +..|+..+ .+.+..+.+|.+.|.+++|+|++ .++++++.++.+.+|+......                         
T Consensus        41 i~iWd~~~-~~~~~~~~~h~~~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------------------------   93 (317)
T d1vyhc1          41 IKVWDYET-GDFERTLKGHTDSVQDISFDHSG-KLLASCSADMTIKLWDFQGFEC-------------------------   93 (317)
T ss_dssp             EEEEETTT-CCCCEEECCCSSCEEEEEECTTS-SEEEEEETTSCCCEEETTSSCE-------------------------
T ss_pred             EEEEECCC-CCEEEEEeCCCCcEEEEeeeccc-cccccccccccccccccccccc-------------------------
Confidence            45566543 35677899999999999999999 8999999999999998765330                         


Q ss_pred             CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE
Q psy17682        105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG  184 (490)
Q Consensus       105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~  184 (490)
                                                                           ...+.+|...+.++.|+|++ ..++++
T Consensus        94 -----------------------------------------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~  119 (317)
T d1vyhc1          94 -----------------------------------------------------IRTMHGHDHNVSSVSIMPNG-DHIVSA  119 (317)
T ss_dssp             -----------------------------------------------------EECCCCCSSCEEEEEECSSS-SEEEEE
T ss_pred             -----------------------------------------------------ccccccccccceeeeccCCC-ceEEee
Confidence                                                                 01234688899999999988 899999


Q ss_pred             eCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEE
Q psy17682        185 SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSA  264 (490)
Q Consensus       185 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~  264 (490)
                      +.|+.+++||+++++....       +.+|...+.+++|+|++. +|++++.|+.|++|++.+++.+..+..|...+.++
T Consensus       120 ~~d~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~  191 (317)
T d1vyhc1         120 SRDKTIKMWEVQTGYCVKT-------FTGHREWVRMVRPNQDGT-LIASCSNDQTVRVWVVATKECKAELREHRHVVECI  191 (317)
T ss_dssp             ETTSEEEEEETTTCCEEEE-------EECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred             ccCcceeEeecccceeeeE-------EccCCCcceeeecccCCC-EEEEEeCCCeEEEEeeccceeeEEEecCCCCceEE
Confidence            9999999999998876554       455899999999999985 99999999999999999999999999999999999


Q ss_pred             EEcCCC--------------------CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCc
Q psy17682        265 SWNWDG--------------------SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMS  324 (490)
Q Consensus       265 ~~~~~~--------------------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~  324 (490)
                      +|+|++                    ..+++++.|+.|++||+++++++.++.+|... +.+++++|++++|++|+   .
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~s~~---~  267 (317)
T d1vyhc1         192 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCA---D  267 (317)
T ss_dssp             EECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSC-EEEEEECSSSSCEEEEE---T
T ss_pred             EEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCC-EEEEEECCCCCEEEEEE---C
Confidence            998754                    46899999999999999999999999988875 99999999999999998   6


Q ss_pred             eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEE
Q psy17682        325 ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFE  377 (490)
Q Consensus       325 ~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd  377 (490)
                      |+.|++||+.+++....+.  .|...|++++|+|++++| ++|+.||+|+|||
T Consensus       268 dg~i~iwd~~~~~~~~~~~--~h~~~V~~~~~s~~~~~l-~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         268 DKTLRVWDYKNKRCMKTLN--AHEHFVTSLDFHKTAPYV-VTGSVDQTVKVWE  317 (317)
T ss_dssp             TTEEEEECCTTSCCCEEEE--CCSSCEEEEEECSSSSCE-EEEETTSEEEEEC
T ss_pred             CCeEEEEECCCCcEEEEEc--CCCCCEEEEEEcCCCCEE-EEEeCCCeEEEeC
Confidence            8999999999876554433  567889999999999998 7899999999997

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.5e-31  Score=240.45  Aligned_cols=272  Identities=11%  Similarity=0.041  Sum_probs=209.6

Q ss_pred             CCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccC
Q psy17682         34 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTA  113 (490)
Q Consensus        34 ~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  113 (490)
                      .+++.+|.||.++|++++|+|     |+||+.||+|++||+.++                                    
T Consensus         3 ~~~i~~l~gH~~~I~~l~~s~-----l~sgs~Dg~v~~Wd~~~~------------------------------------   41 (287)
T d1pgua2           3 DEVLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSSSM------------------------------------   41 (287)
T ss_dssp             EEEEEEECCCSSCEEEEETTT-----TEEEETTSCEEETTTTEE------------------------------------
T ss_pred             cceeEEECCCCCceEEEEECc-----EEEEeCCCeEEEEECCCC------------------------------------
Confidence            468899999999999999987     999999999999986541                                    


Q ss_pred             CeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEE
Q psy17682        114 NEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVW  193 (490)
Q Consensus       114 ~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iw  193 (490)
                                                                     ..+|...|.+++++++  ..+++++.|++|++|
T Consensus        42 -----------------------------------------------~~~h~~~V~~~~~~~~--~~~~s~s~D~~v~~w   72 (287)
T d1pgua2          42 -----------------------------------------------HQDHSNLIVSLDNSKA--QEYSSISWDDTLKVN   72 (287)
T ss_dssp             -----------------------------------------------ECCCCSCEEEEECCST--TCCEEEETTTEEEET
T ss_pred             -----------------------------------------------CCCCCCCEEEEEecCC--CeEEEEeeccccccc
Confidence                                                           1268889999999974  468999999999999


Q ss_pred             ECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEE
Q psy17682        194 QIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKL  273 (490)
Q Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  273 (490)
                      ++...+              ....+.++.+++++.  ++..+.++.+.+|+..+++.+..+.. ...+  .++++++..+
T Consensus        73 ~~~~~~--------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~  133 (287)
T d1pgua2          73 GITKHE--------------FGSQPKVASANNDGF--TAVLTNDDDLLILQSFTGDIIKSVRL-NSPG--SAVSLSQNYV  133 (287)
T ss_dssp             TEEEEE--------------CSSCEEEEEECSSSE--EEEEETTSEEEEEETTTCCEEEEEEC-SSCE--EEEEECSSEE
T ss_pred             cccccc--------------cccceeeeeeccCCc--eEEEeecccceeeeccceeeeeeccc-ccee--eeeeccCcce
Confidence            974321              334577888888873  44455677899999999998888774 3444  4556778888


Q ss_pred             EEEeCCC-eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCcee
Q psy17682        274 LTTCKDK-KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVM  352 (490)
Q Consensus       274 ~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~  352 (490)
                      ++++.++ .+++|++...+....+.......+.+++|+|++.+|++|+   .++.|++||+.+..... .....|...|.
T Consensus       134 ~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~---~dg~i~i~d~~~~~~~~-~~~~~h~~~v~  209 (287)
T d1pgua2         134 AVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGD---VMGKILLYDLQSREVKT-SRWAFRTSKIN  209 (287)
T ss_dssp             EEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEE---TTSCEEEEETTTTEEEE-CCSCCCSSCEE
T ss_pred             eeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCcccccccc---ccccccceeeccccccc-ccccccccccc
Confidence            8888765 7999999877665555543334599999999999999998   68899999998754221 12235667899


Q ss_pred             eeeecCCC----------CeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-cceeEEEEe
Q psy17682        353 FPLYDPDT----------NLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-CEIGRFFRL  421 (490)
Q Consensus       353 ~~~~s~~~----------~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~~~~~  421 (490)
                      +++|+|++          .++ ++|+.|+.|++||+..+......+.  .|...|++++|+|++.++.++ ++.+++|++
T Consensus       210 ~~~~~p~~~~~~~~~~~~~~l-~sgs~D~~i~iw~~~~~~~~~~~~~--~h~~~V~~v~~~~~~~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         210 AISWKPAEKGANEEEIEEDLV-ATGSLDTNIFIYSVKRPMKIIKALN--AHKDGVNNLLWETPSTLVSSGADACIKRWNV  286 (287)
T ss_dssp             EEEECCCC------CCSCCEE-EEEETTSCEEEEESSCTTCCEEETT--SSTTCEEEEEEEETTEEEEEETTSCEEEEEE
T ss_pred             eeeecccccccccccCCCCee-EeecCCCeEEEEECCCCCeEEEEeC--CCCCCeEEEEECCCCEEEEEECCCeEEEEEE
Confidence            99998754          455 8999999999999987554433332  456789999999998765555 458899986

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.7e-31  Score=248.76  Aligned_cols=295  Identities=9%  Similarity=0.011  Sum_probs=210.4

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      +.+..+.+|.+.|++|+|+|++ .+|||||.||+|+|||+..+....                                 
T Consensus         2 ~~v~~~~~h~d~I~~l~fsp~~-~~L~s~s~Dg~v~iwd~~~~~~~~---------------------------------   47 (342)
T d1yfqa_           2 QIVQIEQAPKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDIQAKNV---------------------------------   47 (342)
T ss_dssp             EEEECSSCCSSCEEEEEEEGGG-TEEEEEETTSEEEEEEEETTTTEE---------------------------------
T ss_pred             CeEEcCCCCCCCEEEEEEeCCC-CEEEEEECCCeEEEEEccCCCcce---------------------------------
Confidence            4567789999999999999999 899999999999999987643100                                 


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                                                                ......+|.++|.+++|+|+++.+|++|+.||.|++|+
T Consensus        48 ------------------------------------------~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~   85 (342)
T d1yfqa_          48 ------------------------------------------DLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD   85 (342)
T ss_dssp             ------------------------------------------EEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred             ------------------------------------------EEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeee
Confidence                                                      00112369999999999998767999999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeE----EEEecC--CCcEEEEEEcC
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIM----IQIECH--PDIVYSASWNW  268 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~----~~~~~~--~~~v~~~~~~~  268 (490)
                      +..+........      .+........+.++. ..+++++.++.+++||++.+...    .....+  ......+.+.+
T Consensus        86 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (342)
T d1yfqa_          86 LIGSPSFQALTN------NEANLGICRICKYGD-DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT  158 (342)
T ss_dssp             SSSSSSEEECBS------CCCCSCEEEEEEETT-TEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEE
T ss_pred             cccccccccccc------ccccccccccccccc-ccccccccccccceeeccccccceeeecccccccccceeeeeeeec
Confidence            987765443321      133334455555565 58999999999999998754322    222222  23345667777


Q ss_pred             CCCEEEEEeCCCeEEEEeCCCCceeeeee---ecCCCceeEEEEe-CCCcEEEEEeCCCceeEEEEecCCCCCCCe----
Q psy17682        269 DGSKLLTTCKDKKMRIINPRTGAIEEEAV---CHEGSKATRAIYL-KSGLIFTTGFSKMSERQYSLRAPDHLDEPI----  340 (490)
Q Consensus       269 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~s-~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~----  340 (490)
                      .+..+++++.|+.|++||++..+......   ..... .....+. .++..+++++   .++.+.+|+........    
T Consensus       159 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s---~dg~~~v~~~~~~~~~~~~~~  234 (342)
T d1yfqa_         159 NSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQ-IRDVALLPKEQEGYACSS---IDGRVAVEFFDDQGDDYNSSK  234 (342)
T ss_dssp             CSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSC-EEEEEECSGGGCEEEEEE---TTSEEEEEECCTTCCSTTCTT
T ss_pred             cCCceeeecCCCcEEEEecccCcccceeeeecccccc-eeeeEeecCCCCEEEeec---CCCeEEEEEecCCcceeeccc
Confidence            88999999999999999998776544332   22222 4444444 4577888887   68899999876543211    


Q ss_pred             --EEE-------eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEe
Q psy17682        341 --VMV-------ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVN  411 (490)
Q Consensus       341 --~~~-------~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~  411 (490)
                        ...       ...+...+.+++|+|++++| ++|+.||.|++||+.+++    .+..+.....+..++|+|++.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l-asg~~Dg~v~vWD~~~~~----~l~~~~~~~~~~~~~~s~~~~~l~~  309 (342)
T d1yfqa_         235 RFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFL-YTAGSDGIISCWNLQTRK----KIKNFAKFNEDSVVKIACSDNILCL  309 (342)
T ss_dssp             CEEEECCCCCTTCCSSCCCEEEEEECTTTCCE-EEEETTSCEEEEETTTTE----EEEECCCCSSSEEEEEEECSSEEEE
T ss_pred             cceeeeeeeccCCCcccccceeEEecCCccEE-EEECCCCEEEEEECCCCc----EEEEecCCCCCEEEEEEeCCCEEEE
Confidence              111       11234458899999999998 899999999999999986    4444444456777889999887776


Q ss_pred             e--cceeEEEEe
Q psy17682        412 S--CEIGRFFRL  421 (490)
Q Consensus       412 ~--~~~~~~~~~  421 (490)
                      +  ++..++|..
T Consensus       310 a~sdd~~~~~~~  321 (342)
T d1yfqa_         310 ATSDDTFKTNAA  321 (342)
T ss_dssp             EEECTHHHHCSS
T ss_pred             EEcCCcEEEeee
Confidence            5  334455543

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.98  E-value=4.8e-30  Score=245.34  Aligned_cols=304  Identities=10%  Similarity=0.007  Sum_probs=208.0

Q ss_pred             EEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCee
Q psy17682         37 VVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEI  116 (490)
Q Consensus        37 ~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  116 (490)
                      ....++|.+.|.++++++   ++++|||.|++|+|||.........           .........+..+.........+
T Consensus         7 ~~~~~~H~~~I~~v~~~~---~~l~S~S~D~~iriWd~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~   72 (393)
T d1sq9a_           7 ANAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENP-----------KDKSYSHFVHKSGLHHVDVLQAI   72 (393)
T ss_dssp             EEESSCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCG-----------GGGEEEEECCTTCEEEEEEEEEE
T ss_pred             eecCCcccCccEEEEEeC---CEEEEEECCCeEEEEECCCCCCCcc-----------cceeEeeeeccCCceEeeeEeee
Confidence            456789999999999875   6799999999999999876542110           00011111111111011111111


Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCC--CcceeecccCCeeEEEECCCC----CCEEEEEeCCCcE
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINA--DHALVGGHKGPVLDIAWSPHD----DNVIASGSEDCVV  190 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~--~~~~~~~h~~~V~~~~~~p~~----~~~l~s~~~dg~i  190 (490)
                      ..+    ......+++++.+|.+.+|++............  .......+...+..++|.+++    ..++++++.||++
T Consensus        73 ~~~----~~~~~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i  148 (393)
T d1sq9a_          73 ERD----AFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTT  148 (393)
T ss_dssp             ETT----TEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCE
T ss_pred             ccC----CCCCcEEEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcE
Confidence            111    122346778888999999987522211110000  011112466778888887753    2688999999999


Q ss_pred             EEEECCCCCcccc-----------cccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe----
Q psy17682        191 KVWQIPDGGISRT-----------LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE----  255 (490)
Q Consensus       191 ~iwd~~~~~~~~~-----------~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~----  255 (490)
                      ++|++........           +.........+...+.+++|+|++  +|++|+.|++|++||+++++++..+.    
T Consensus       149 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg--~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~  226 (393)
T d1sq9a_         149 YIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHS  226 (393)
T ss_dssp             EEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECCC-
T ss_pred             EEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC--EEEEEeCCCcEEEEeecccccccccccccc
Confidence            9999853321110           111111223456678999999986  79999999999999999998776553    


Q ss_pred             --cCCCcEEEEEEcCCCCEEEEEeCCC---eEEEEeCCCCceeeeee-------------ecCCCceeEEEEeCCCcEEE
Q psy17682        256 --CHPDIVYSASWNWDGSKLLTTCKDK---KMRIINPRTGAIEEEAV-------------CHEGSKATRAIYLKSGLIFT  317 (490)
Q Consensus       256 --~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~-------------~~~~~~~~~~~~s~~~~~l~  317 (490)
                        +|...|.+++|+|+|++|++|+.|+   .|++||+++++.+..+.             +|.+. |++++|+|++++|+
T Consensus       227 l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~-V~~l~fspd~~~l~  305 (393)
T d1sq9a_         227 MINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW-VMSLSFNDSGETLC  305 (393)
T ss_dssp             --CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC-EEEEEECSSSSEEE
T ss_pred             cccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCc-eeeeccCCCCCeeE
Confidence              6889999999999999999999887   49999999998877764             57665 99999999999999


Q ss_pred             EEeCCCceeEEEEecCCCCCCCeEEEeccCCCce----eeeeecCCCCeEEEEe
Q psy17682        318 TGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGV----MFPLYDPDTNLVYLCG  367 (490)
Q Consensus       318 ~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i----~~~~~s~~~~~l~~~g  367 (490)
                      +|+   .|++|++||++++++...+.  .|...|    ..++|+|++..+ +++
T Consensus       306 S~s---~D~~v~vWd~~~g~~~~~l~--gH~~~v~~~~~~~~~~~~~~~~-~~~  353 (393)
T d1sq9a_         306 SAG---WDGKLRFWDVKTKERITTLN--MHCDDIEIEEDILAVDEHGDSL-AEP  353 (393)
T ss_dssp             EEE---TTSEEEEEETTTTEEEEEEE--CCGGGCSSGGGCCCBCTTSCBC-SSC
T ss_pred             EEC---CCCEEEEEECCCCCEEEEEC--CcCCcccCCccEEEECCCCCEE-EEc
Confidence            999   79999999999876443332  454444    357899999887 444

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=9.2e-30  Score=236.74  Aligned_cols=291  Identities=13%  Similarity=0.080  Sum_probs=207.3

Q ss_pred             cCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecc-cCCeeEEEECCC-CCCEEEEEeCCCc
Q psy17682        112 TANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGH-KGPVLDIAWSPH-DDNVIASGSEDCV  189 (490)
Q Consensus       112 ~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~~~~~p~-~~~~l~s~~~dg~  189 (490)
                      ...+++|+|+.  .  .++...+....++.|+..      .........+.+| ...|++++|+|+ ++.+|++|+.||+
T Consensus        19 ~~t~l~~~~~~--~--~la~~~~~~~~i~~~~~~------~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~   88 (325)
T d1pgua1          19 FTTHLSYDPTT--N--AIAYPCGKSAFVRCLDDG------DSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGK   88 (325)
T ss_dssp             CCCCCEEETTT--T--EEEEEETTEEEEEECCSS------CCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSE
T ss_pred             CeEEEEECCCC--C--EEEEEeCCCEEEEEEeCC------CCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCC
Confidence            45788898885  2  122233333445556542      1222345566777 468999999984 2379999999999


Q ss_pred             EEEEECCCCCcccccccce-eeecccccCEEEEEEeeCCCCEEEEEeC--CCcEEEEECCCCeeEEEEecCCCcEEEEEE
Q psy17682        190 VKVWQIPDGGISRTLTEPV-VDLLYHQRRVGLVLWHPTAQNVLLTAGS--DNNVAIWNVGTGEIMIQIECHPDIVYSASW  266 (490)
Q Consensus       190 i~iwd~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~p~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~  266 (490)
                      |+|||+..++....+.... ..+..|.++|.+++|++++. .+++++.  ++.+++|+.++++.+..+.+|...|.+++|
T Consensus        89 i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~  167 (325)
T d1pgua1          89 VIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGR-RLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHL  167 (325)
T ss_dssp             EEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSS-EEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEE
T ss_pred             EEEeeecCCcceeeeecccccccccccCcEEEEEECCCCC-ccceeeccccceEEEEeecccccceeeeecccccccccc
Confidence            9999998776555443222 23456889999999999996 6666554  678999999999999999999999999999


Q ss_pred             cCCCCE-EEEEeCCCeEEEEeCCCCceeeeeee---cCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeE
Q psy17682        267 NWDGSK-LLTTCKDKKMRIINPRTGAIEEEAVC---HEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIV  341 (490)
Q Consensus       267 ~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~  341 (490)
                      +|++.+ +++++.|+.+++||.+..+.......   |.. .+.+++|+|+ +.++++++   .|+.|++||+++++....
T Consensus       168 ~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~-~v~~v~~~pd~~~~l~s~~---~d~~i~iwd~~~~~~~~~  243 (325)
T d1pgua1         168 KQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGS-FVRDVEFSPDSGEFVITVG---SDRKISCFDGKSGEFLKY  243 (325)
T ss_dssp             CSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTC-CEEEEEECSTTCCEEEEEE---TTCCEEEEETTTCCEEEE
T ss_pred             cccccceEEEeecccccccccccccccceecccccCCCC-ccEEeeeccccceeccccc---cccceeeeeecccccccc
Confidence            998865 77899999999999998876665543   333 4899999997 68888888   689999999987663222


Q ss_pred             EEeccCCCceeeeeec---CCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceee--EEEeeCceeEEee-cce
Q psy17682        342 MVELDTSNGVMFPLYD---PDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRG--IGMMPKRGCDVNS-CEI  415 (490)
Q Consensus       342 ~~~~~~~~~i~~~~~s---~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~--~~~sp~~~~l~~~-~~~  415 (490)
                      +  ..|...+..+.|+   |+|++| ++++.|+.|+|||+.+++.+ ..+....+...+..  +.+.+++.++..+ ++.
T Consensus       244 l--~~~~~~v~~~~~s~~~~dg~~l-~s~s~D~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~  319 (325)
T d1pgua1         244 I--EDDQEPVQGGIFALSWLDSQKF-ATVGADATIRVWDVTTSKCV-QKWTLDKQQLGNQQVGVVATGNGRIISLSLDGT  319 (325)
T ss_dssp             C--CBTTBCCCSCEEEEEESSSSEE-EEEETTSEEEEEETTTTEEE-EEEECCTTCGGGCEEEEEEEETTEEEEEETTSC
T ss_pred             c--cccccccccceeeeeccCCCEE-EEEeCCCeEEEEECCCCCEE-EEEEecCCcccCeEEEEEECCCCEEEEEECCCE
Confidence            2  2344555555555   788888 78999999999999998732 22222222223344  4445555544333 568


Q ss_pred             eEEEEe
Q psy17682        416 GRFFRL  421 (490)
Q Consensus       416 ~~~~~~  421 (490)
                      +++|++
T Consensus       320 i~vwdl  325 (325)
T d1pgua1         320 LNFYEL  325 (325)
T ss_dssp             EEEEET
T ss_pred             EEEEEC
Confidence            899985

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=5.6e-29  Score=233.13  Aligned_cols=303  Identities=15%  Similarity=0.177  Sum_probs=221.2

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK  104 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (490)
                      +..|+..+ .+++.++.+|.+.|++++|+|+  .+|+||+.|++|++|+........                 ..... 
T Consensus        35 i~vWd~~~-~~~~~~l~~H~~~V~~l~~s~~--~~l~s~s~D~~i~iw~~~~~~~~~-----------------~~~~~-   93 (355)
T d1nexb2          35 IRVYDSIN-KKFLLQLSGHDGGVWALKYAHG--GILVSGSTDRTVRVWDIKKGCCTH-----------------VFEGH-   93 (355)
T ss_dssp             EEEEETTT-TEEEEEEECCSSCEEEEEEETT--TEEEEEETTCCEEEEETTTTEEEE-----------------EECCC-
T ss_pred             EEEEECCC-CcEEEEEECCCCCEEEEEEcCC--CEEEEEeccccccccccccccccc-----------------ccccc-
Confidence            56677654 4677889999999999999985  579999999999999988754110                 00000 


Q ss_pred             CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCccc---------------CCCCcceeecccCCee
Q psy17682        105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGR---------------INADHALVGGHKGPVL  169 (490)
Q Consensus       105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~---------------~~~~~~~~~~h~~~V~  169 (490)
                         ..........++++     ...++.++.++.+++|++.........               ..........|...+.
T Consensus        94 ---~~~~~~~~~~~~~~-----~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  165 (355)
T d1nexb2          94 ---NSTVRCLDIVEYKN-----IKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVR  165 (355)
T ss_dssp             ---SSCEEEEEEEEETT-----EEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEE
T ss_pred             ---cccccccccccccc-----cceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeecccccc
Confidence               00111223334444     356778899999999998632211100               0011223344555665


Q ss_pred             EEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe
Q psy17682        170 DIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE  249 (490)
Q Consensus       170 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~  249 (490)
                      +....  + ++++++..|+.|++||+.+++.+..       ..++...+.++.|+|++. .+++++.|+.|++||++++.
T Consensus       166 ~~~~~--~-~~~~~~~~d~~i~~~d~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~d~~i~i~d~~~~~  234 (355)
T d1nexb2         166 TVSGH--G-NIVVSGSYDNTLIVWDVAQMKCLYI-------LSGHTDRIYSTIYDHERK-RCISASMDTTIRIWDLENGE  234 (355)
T ss_dssp             EEEEE--T-TEEEEEETTSCEEEEETTTTEEEEE-------ECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTCC
T ss_pred             ccccc--c-ceeeeecccceeeeeecccccceee-------eeccccccccccccccce-eeecccccceEEeeeccccc
Confidence            55443  5 7999999999999999988765543       445788899999999985 99999999999999999999


Q ss_pred             eEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEE
Q psy17682        250 IMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYS  329 (490)
Q Consensus       250 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~  329 (490)
                      .+..+.+|...|.+++++  +++|++++.||.|++||+++....  +..|.........+++++.++++|+    |+.|+
T Consensus       235 ~~~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~g~----d~~i~  306 (355)
T d1nexb2         235 LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRK--FSYHHTNLSAITTFYVSDNILVSGS----ENQFN  306 (355)
T ss_dssp             EEEEECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCCEE--EEEECTTCCCCCEEEECSSEEEEEE----TTEEE
T ss_pred             cccccccccccccccccc--cceeeeeeccccccccccccccee--cccccCCceEEEEEcCCCCEEEEEe----CCEEE
Confidence            999999999999999997  579999999999999999987654  4445555455556788899988885    78999


Q ss_pred             EecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEe
Q psy17682        330 LRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEI  378 (490)
Q Consensus       330 iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~  378 (490)
                      +||+++++.... ....|...|.+++|+|+  .++++++.||.++||.+
T Consensus       307 vwd~~tg~~~~~-~~~~~~~~V~~v~~~~~--~~~~~~s~dg~~~l~~~  352 (355)
T d1nexb2         307 IYNLRSGKLVHA-NILKDADQIWSVNFKGK--TLVAAVEKDGQSFLEIL  352 (355)
T ss_dssp             EEETTTCCBCCS-CTTTTCSEEEEEEEETT--EEEEEEESSSCEEEEEE
T ss_pred             EEECCCCCEEEE-EecCCCCCEEEEEEcCC--eEEEEEECCCcEEEEEE
Confidence            999998764322 22356778999999986  35578899998776654

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=3.9e-28  Score=226.31  Aligned_cols=261  Identities=19%  Similarity=0.218  Sum_probs=211.5

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK  104 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (490)
                      +..|+..+ ...+..+.+|...|.+++|+|++ .++++|+.|+.+++|+........                       
T Consensus        79 v~iWd~~~-~~~~~~~~~~~~~v~~v~~~~~~-~~l~~~~~d~~i~~~~~~~~~~~~-----------------------  133 (340)
T d1tbga_          79 LIIWDSYT-TNKVHAIPLRSSWVMTCAYAPSG-NYVACGGLDNICSIYNLKTREGNV-----------------------  133 (340)
T ss_dssp             EEEEETTT-TEEEEEEECSCSCEEEEEECTTS-SEEEEEETTCCEEEEESSSSCSCC-----------------------
T ss_pred             eeeeeccc-ceeEEEEecccccEEeeEeeccc-eeeeeecccceeeccccccccccc-----------------------
Confidence            56666653 35567889999999999999999 899999999999999987643100                       


Q ss_pred             CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE
Q psy17682        105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG  184 (490)
Q Consensus       105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~  184 (490)
                                                                         .....+.+|........... + ..+..+
T Consensus       134 ---------------------------------------------------~~~~~~~~~~~~~~~~~~~~-~-~~~~~~  160 (340)
T d1tbga_         134 ---------------------------------------------------RVSRELAGHTGYLSCCRFLD-D-NQIVTS  160 (340)
T ss_dssp             ---------------------------------------------------CEEEEECCCSSCEEEEEEEE-T-TEEEEE
T ss_pred             ---------------------------------------------------ccceeccccccccccccccc-c-cccccc
Confidence                                                               01113446777676666665 3 578888


Q ss_pred             eCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEE
Q psy17682        185 SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSA  264 (490)
Q Consensus       185 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~  264 (490)
                      ..|.....+..........       ...+...+....+.+.+. ++++|+.|+.|++||+++++++..+.+|...|+++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v  232 (340)
T d1tbga_         161 SGDTTCALWDIETGQQTTT-------FTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGMCRQTFTGHESDINAI  232 (340)
T ss_dssp             ETTTEEEEEETTTTEEEEE-------EECCSSCEEEEEECTTSS-EEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred             ccccccccccccccccccc-------ccccceeEeeeccccccc-eeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEE
Confidence            8899999998765543332       334777889999999885 99999999999999999999999999999999999


Q ss_pred             EEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeee-cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEE
Q psy17682        265 SWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVC-HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMV  343 (490)
Q Consensus       265 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~  343 (490)
                      +|+|++++|++++.||.|++||++.......+.. .....+..++|+|++++|++|+   .++.|++||+.+++....  
T Consensus       233 ~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~---~dg~i~iwd~~~~~~~~~--  307 (340)
T d1tbga_         233 CFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGY---DDFNCNVWDALKADRAGV--  307 (340)
T ss_dssp             EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEE---TTSCEEEEETTTCCEEEE--
T ss_pred             EECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEEEEE---CCCEEEEEECCCCcEEEE--
Confidence            9999999999999999999999999887776642 2223489999999999999998   689999999988664322  


Q ss_pred             eccCCCceeeeeecCCCCeEEEEecCCCeEEEEE
Q psy17682        344 ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFE  377 (490)
Q Consensus       344 ~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd  377 (490)
                      ...|...|.+++|+|++++| ++|+.||.|+|||
T Consensus       308 ~~~H~~~V~~l~~s~d~~~l-~s~s~Dg~v~iWd  340 (340)
T d1tbga_         308 LAGHDNRVSCLGVTDDGMAV-ATGSWDSFLKIWN  340 (340)
T ss_dssp             ECCCSSCEEEEEECTTSSCE-EEEETTSCEEEEC
T ss_pred             EcCCCCCEEEEEEeCCCCEE-EEEccCCEEEEeC
Confidence            23567889999999999998 7899999999997

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3e-27  Score=214.89  Aligned_cols=281  Identities=12%  Similarity=0.132  Sum_probs=209.3

Q ss_pred             CcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCC
Q psy17682         35 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTAN  114 (490)
Q Consensus        35 ~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (490)
                      ..+..+.+|...|+|+.|  ++ ++|||||.||+|+|||+.+++.                  ...+.+     +...|.
T Consensus         6 ~~i~~~~~~~~~V~c~~~--d~-~~l~sgs~Dg~i~vWd~~~~~~------------------~~~l~~-----H~~~V~   59 (293)
T d1p22a2           6 QRIHCRSETSKGVYCLQY--DD-QKIVSGLRDNTIKIWDKNTLEC------------------KRILTG-----HTGSVL   59 (293)
T ss_dssp             CCEECCCSSCCCEEEEEC--CS-SEEEEEESSSCEEEEESSSCCE------------------EEEECC-----CSSCEE
T ss_pred             EEEeccCCCCCCEEEEEE--cC-CEEEEEeCCCeEEEEECCCCcE------------------EEEEec-----CCCCEe
Confidence            456678899999999876  56 8999999999999999987652                  111111     233567


Q ss_pred             eeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEE
Q psy17682        115 EITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQ  194 (490)
Q Consensus       115 ~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd  194 (490)
                      ++++.+.       .+++++.++.+.+|++..     +.   .......+....  ..+.+.. ..++++..++.+++|+
T Consensus        60 ~v~~~~~-------~l~s~s~D~~i~~~~~~~-----~~---~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~  121 (293)
T d1p22a2          60 CLQYDER-------VIITGSSDSTVRVWDVNT-----GE---MLNTLIHHCEAV--LHLRFNN-GMMVTCSKDRSIAVWD  121 (293)
T ss_dssp             EEECCSS-------EEEEEETTSCEEEEESSS-----CC---EEEEECCCCSCE--EEEECCT-TEEEEEETTSCEEEEE
T ss_pred             eeecccc-------eeeccccccccccccccc-----cc---cccccccccccc--ccccccc-cceeecccccceeEee
Confidence            7777654       578899999999999851     11   112222222222  2333334 6899999999999999


Q ss_pred             CCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEE
Q psy17682        195 IPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLL  274 (490)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  274 (490)
                      .........    ...+..|...+..+.+.+.   .+++++.|+.|++||+++++.+..+.++...+..+.++  +..++
T Consensus       122 ~~~~~~~~~----~~~~~~~~~~v~~~~~~~~---~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~  192 (293)
T d1p22a2         122 MASPTDITL----RRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVV  192 (293)
T ss_dssp             CSSSSCCEE----EEEECCCSSCEEEEEEETT---EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEE
T ss_pred             ccccccccc----cccccccccccccceeccc---ccccccCCCceeeecCCCCcEEEEEcccccccccccCC--CCeEE
Confidence            887654332    2235568888888877653   68899999999999999999999999999999888876  56899


Q ss_pred             EEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC-------CeEEEeccC
Q psy17682        275 TTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE-------PIVMVELDT  347 (490)
Q Consensus       275 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~-------~~~~~~~~~  347 (490)
                      +++.||+|++||+++.+.+.....+... +.  .+++++.+|++|+   .|+.|++||+.....       ........|
T Consensus       193 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~-v~--~~~~~~~~l~sg~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H  266 (293)
T d1p22a2         193 SGSSDNTIRLWDIECGACLRVLEGHEEL-VR--CIRFDNKRIVSGA---YDGKIKVWDLVAALDPRAPAGTLCLRTLVEH  266 (293)
T ss_dssp             EEETTSCEEEEETTTCCEEEEECCCSSC-EE--EEECCSSEEEEEE---TTSCEEEEEHHHHTSTTSCTTTTEEEEECCC
T ss_pred             EecCCCEEEEEecccceeeeeeccccee-ee--eccccceEEEEEc---CCCEEEEEECCCCccccccCCceeeEEecCC
Confidence            9999999999999999998888776653 33  4677888999998   689999999754221       112223357


Q ss_pred             CCceeeeeecCCCCeEEEEecCCCeEEEEE
Q psy17682        348 SNGVMFPLYDPDTNLVYLCGKGDSVIRYFE  377 (490)
Q Consensus       348 ~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd  377 (490)
                      ...|.+++|+  +++| ++|+.||+|++||
T Consensus       267 ~~~V~~v~~d--~~~l-~s~s~Dg~i~iWD  293 (293)
T d1p22a2         267 SGRVFRLQFD--EFQI-VSSSHDDTILIWD  293 (293)
T ss_dssp             SSCCCCEEEC--SSCE-EECCSSSEEEEEC
T ss_pred             CCCEEEEEEc--CCEE-EEEecCCEEEEeC
Confidence            7789999885  5666 8999999999997

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.5e-27  Score=218.76  Aligned_cols=295  Identities=16%  Similarity=0.165  Sum_probs=213.5

Q ss_pred             eeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCC
Q psy17682         25 LTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGK  104 (490)
Q Consensus        25 ~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (490)
                      +..|+..+ .+++.++.+|.+.|.+++|+|   .+|++|+.|+++++|+........                 ....  
T Consensus        39 i~vWd~~~-~~~~~~~~~h~~~V~~v~~~~---~~l~s~s~D~~~~~~~~~~~~~~~-----------------~~~~--   95 (342)
T d2ovrb2          39 LKVWSAVT-GKCLRTLVGHTGGVWSSQMRD---NIIISGSTDRTLKVWNAETGECIH-----------------TLYG--   95 (342)
T ss_dssp             EEEEETTT-CCEEEECCCCSSCEEEEEEET---TEEEEEETTSCEEEEETTTTEEEE-----------------EECC--
T ss_pred             EEEEECCC-CCEEEEEeCCCCCEEEEEeCC---Cccccceeccccccccccccccee-----------------cccc--
Confidence            55677653 457788999999999999987   589999999999999987643100                 0000  


Q ss_pred             CCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE
Q psy17682        105 GGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG  184 (490)
Q Consensus       105 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~  184 (490)
                          ....+......+.       ....+..++.+.+|+..     .++   ....+..+........  +.. ..++++
T Consensus        96 ----~~~~~~~~~~~~~-------~~~~~~~d~~i~~~~~~-----~~~---~~~~~~~~~~~~~~~~--~~~-~~~~~~  153 (342)
T d2ovrb2          96 ----HTSTVRCMHLHEK-------RVVSGSRDATLRVWDIE-----TGQ---CLHVLMGHVAAVRCVQ--YDG-RRVVSG  153 (342)
T ss_dssp             ----CSSCEEEEEEETT-------EEEEEETTSEEEEEESS-----SCC---EEEEEECCSSCEEEEE--ECS-SCEEEE
T ss_pred             ----cceeEeeeecccc-------cccccccceeEEEeecc-----ccc---ceeeeecccccceeec--ccc-ceeeee
Confidence                0001112222222       34556788899999875     111   2223333333333333  333 688999


Q ss_pred             eCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEE
Q psy17682        185 SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSA  264 (490)
Q Consensus       185 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~  264 (490)
                      +.|+.|++||......+..       +.+|...+..+.+  ++ ..+++++.||.|++||++.++.+..+..|...+.++
T Consensus       154 ~~d~~i~~~d~~~~~~~~~-------~~~~~~~~~~~~~--~~-~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~  223 (342)
T d2ovrb2         154 AYDFMVKVWDPETETCLHT-------LQGHTNRVYSLQF--DG-IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM  223 (342)
T ss_dssp             ETTSCEEEEEGGGTEEEEE-------ECCCSSCEEEEEE--CS-SEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEE
T ss_pred             cCCCeEEEeecccceeeEE-------EcCcccccccccC--CC-CEEEEEeCCCeEEEeecccceeeeEecccccceeEE
Confidence            9999999999876654443       4457776666544  55 489999999999999999999999999999999988


Q ss_pred             EEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe
Q psy17682        265 SWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE  344 (490)
Q Consensus       265 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~  344 (490)
                      +++  +++|++++.|+.|++||+...+....+..+........++++++.++++|+   .|+.|++||+++++....+..
T Consensus       224 ~~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s---~Dg~i~iwd~~tg~~i~~~~~  298 (342)
T d2ovrb2         224 ELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSS---DDGTVKLWDLKTGEFIRNLVT  298 (342)
T ss_dssp             EEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEE---TTSEEEEEETTTCCEEEEEEE
T ss_pred             ecC--CCEEEEEcCCCEEEEEecccccccccccccceeeeceeecccCCCeeEEEc---CCCEEEEEECCCCCEEEEEec
Confidence            886  569999999999999999999888877755443344445555677899998   689999999998775444332


Q ss_pred             ---ccCCCceeeeeecCCCCeEEEEecCCCe----EEEEEecC
Q psy17682        345 ---LDTSNGVMFPLYDPDTNLVYLCGKGDSV----IRYFEITA  380 (490)
Q Consensus       345 ---~~~~~~i~~~~~s~~~~~l~~~g~~dg~----i~iwd~~~  380 (490)
                         ..+...|++++|+|++.++ ++|+.||+    |++||+..
T Consensus       299 ~~~~~~~~~v~~v~~s~~~~~l-a~g~~dGt~~~~l~~~Df~~  340 (342)
T d2ovrb2         299 LESGGSGGVVWRIRASNTKLVC-AVGSRNGTEETKLLVLDFDV  340 (342)
T ss_dssp             CTTGGGTCEEEEEEECSSEEEE-EEECSSSSSCCEEEEEECCC
T ss_pred             ccCCCCCCCEEEEEECCCCCEE-EEEeCCCCCeeEEEEEeCCC
Confidence               2345669999999999877 88988884    99999864

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2.9e-27  Score=225.84  Aligned_cols=290  Identities=10%  Similarity=0.064  Sum_probs=200.0

Q ss_pred             ccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeE------EEECCCCCCEEE
Q psy17682        109 RNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLD------IAWSPHDDNVIA  182 (490)
Q Consensus       109 ~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~------~~~~p~~~~~l~  182 (490)
                      +...|.+++++++       .+++++.|+.|++|+....+....  .........|...+..      +..++....+++
T Consensus        13 H~~~I~~v~~~~~-------~l~S~S~D~~iriWd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (393)
T d1sq9a_          13 HDADIFSVSACNS-------FTVSCSGDGYLKVWDNKLLDNENP--KDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA   83 (393)
T ss_dssp             SSSCEEEEEECSS-------EEEEEETTSEEEEEESBCCTTCCG--GGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred             ccCccEEEEEeCC-------EEEEEECCCeEEEEECCCCCCCcc--cceeEeeeeccCCceEeeeEeeeccCCCCCcEEE
Confidence            4456888888775       467888999999998752221110  0111122234444332      233332335788


Q ss_pred             EEeCCCcEEEEECCCCCccccccc---ceeeecccccCEEEEEEeeCCC----CEEEEEeCCCcEEEEECCCCe------
Q psy17682        183 SGSEDCVVKVWQIPDGGISRTLTE---PVVDLLYHQRRVGLVLWHPTAQ----NVLLTAGSDNNVAIWNVGTGE------  249 (490)
Q Consensus       183 s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~p~~~----~~l~s~~~dg~v~iwd~~~~~------  249 (490)
                      +++.||.|++|++...........   .......+...+..++|.++..    .++++++.||.+++|++....      
T Consensus        84 s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~  163 (393)
T d1sq9a_          84 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL  163 (393)
T ss_dssp             EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred             EEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCccccee
Confidence            999999999999875544332211   1111223556788888887642    478999999999999974211      


Q ss_pred             ---------eEEEE---ecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee------ecCCCceeEEEEeC
Q psy17682        250 ---------IMIQI---ECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV------CHEGSKATRAIYLK  311 (490)
Q Consensus       250 ---------~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------~~~~~~~~~~~~s~  311 (490)
                               .....   ..+...+.+++|+|++ +|++|+.||+|++||+.+++++..+.      +|... |.+++|+|
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~-V~~l~~sp  241 (393)
T d1sq9a_         164 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS-IRSVKFSP  241 (393)
T ss_dssp             TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCC-EEEEEECS
T ss_pred             eeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccce-EEEccccc
Confidence                     11111   1345668899999987 89999999999999999998776554      45554 99999999


Q ss_pred             CCcEEEEEeCCCceeEEEEecCCCCCCCeEEE-----------eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC
Q psy17682        312 SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMV-----------ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA  380 (490)
Q Consensus       312 ~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~-----------~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~  380 (490)
                      +|++|++|+++...+.|++||+.++.....+.           ..+|...|++++|+|++++| ++|+.|++|++||+.+
T Consensus       242 dg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l-~S~s~D~~v~vWd~~~  320 (393)
T d1sq9a_         242 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETL-CSAGWDGKLRFWDVKT  320 (393)
T ss_dssp             STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEE-EEEETTSEEEEEETTT
T ss_pred             ccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCee-EEECCCCEEEEEECCC
Confidence            99999999966566789999999865433221           12577889999999999998 8999999999999999


Q ss_pred             CCCeeEEeeeeeCCCce----eeEEEeeCceeEEeec
Q psy17682        381 EPPFVHYINTFQTPDPQ----RGIGMMPKRGCDVNSC  413 (490)
Q Consensus       381 ~~~~~~~~~~~~~~~~i----~~~~~sp~~~~l~~~~  413 (490)
                      ++. +..+.  .|...|    ..++|+|++..+++++
T Consensus       321 g~~-~~~l~--gH~~~v~~~~~~~~~~~~~~~~~~~~  354 (393)
T d1sq9a_         321 KER-ITTLN--MHCDDIEIEEDILAVDEHGDSLAEPG  354 (393)
T ss_dssp             TEE-EEEEE--CCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred             CCE-EEEEC--CcCCcccCCccEEEECCCCCEEEEcc
Confidence            872 22332  233344    4688999998876554

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=2.4e-26  Score=213.52  Aligned_cols=262  Identities=11%  Similarity=0.047  Sum_probs=190.8

Q ss_pred             cceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC
Q psy17682        158 HALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD  237 (490)
Q Consensus       158 ~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d  237 (490)
                      ++..++|++.|++|+|+|++ ++|++|+.||+|+|||++++.....+.    ...+|..+|.+++|+|++..+|++|+.|
T Consensus         4 v~~~~~h~d~I~~l~fsp~~-~~L~s~s~Dg~v~iwd~~~~~~~~~~~----~~~~h~~~V~~v~f~~~~~~~l~sg~~d   78 (342)
T d1yfqa_           4 VQIEQAPKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDIQAKNVDLL----QSLRYKHPLLCCNFIDNTDLQIYVGTVQ   78 (342)
T ss_dssp             EECSSCCSSCEEEEEEEGGG-TEEEEEETTSEEEEEEEETTTTEEEEE----EEEECSSCEEEEEEEESSSEEEEEEETT
T ss_pred             EEcCCCCCCCEEEEEEeCCC-CEEEEEECCCeEEEEEccCCCcceEEE----EecCCCCCEEEEEEeCCCCCEEEEcccc
Confidence            44568999999999999998 899999999999999998765433322    2345999999999999876689999999


Q ss_pred             CcEEEEECCCCeeEEEEecCC-CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeee----c-CCCceeEEEEeC
Q psy17682        238 NNVAIWNVGTGEIMIQIECHP-DIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVC----H-EGSKATRAIYLK  311 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~-~~~~~~~~~~s~  311 (490)
                      +.|++|++..+........+. .......+.+++..+++++.++++++||++.+........    + .........+.+
T Consensus        79 ~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (342)
T d1yfqa_          79 GEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT  158 (342)
T ss_dssp             SCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEE
T ss_pred             cceeeeecccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeec
Confidence            999999999887766665443 3344555667888999999999999999976544333321    1 112245667788


Q ss_pred             CCcEEEEEeCCCceeEEEEecCCCCCCCeEEE-eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeE----
Q psy17682        312 SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMV-ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVH----  386 (490)
Q Consensus       312 ~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~----  386 (490)
                      .+..+++++   .++.+++||+.......... .......+....+.+.....+++++.||.+.+|+.........    
T Consensus       159 ~~~~~~~~~---~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~  235 (342)
T d1yfqa_         159 NSSRLIVGM---NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR  235 (342)
T ss_dssp             CSSEEEEEE---STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTC
T ss_pred             cCCceeeec---CCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeecccc
Confidence            888888888   68999999998766543332 2233344555555554444448899999999999875432110    


Q ss_pred             -Ee-------eeeeCCCceeeEEEeeCceeEEeec--ceeEEEEecCCCce
Q psy17682        387 -YI-------NTFQTPDPQRGIGMMPKRGCDVNSC--EIGRFFRLNNSGLC  427 (490)
Q Consensus       387 -~~-------~~~~~~~~i~~~~~sp~~~~l~~~~--~~~~~~~~~~~~~~  427 (490)
                       ..       ....+...+++++|+|++.++++++  +.+++|++.+++.+
T Consensus       236 ~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l  286 (342)
T d1yfqa_         236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI  286 (342)
T ss_dssp             EEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred             ceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEE
Confidence             00       0112334689999999999999874  58899999987633

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.94  E-value=3.4e-26  Score=214.98  Aligned_cols=316  Identities=9%  Similarity=0.045  Sum_probs=217.9

Q ss_pred             eeEEecc-CCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccce
Q psy17682         48 GLVLWHP-TAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEF  126 (490)
Q Consensus        48 ~~v~~~p-~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~  126 (490)
                      ..-.||| +| +++|+++. |.|.+||..++.                   ...+.+      ...+.+++|+|++    
T Consensus         6 ~~~~fSP~dG-~~~a~~~~-g~v~v~d~~~~~-------------------~~~~~~------~~~v~~~~~spDg----   54 (360)
T d1k32a3           6 FAEDFSPLDG-DLIAFVSR-GQAFIQDVSGTY-------------------VLKVPE------PLRIRYVRRGGDT----   54 (360)
T ss_dssp             GEEEEEECGG-GCEEEEET-TEEEEECTTSSB-------------------EEECSC------CSCEEEEEECSSS----
T ss_pred             hcccccCCCC-CEEEEEEC-CeEEEEECCCCc-------------------EEEccC------CCCEEEEEECCCC----
Confidence            3457999 77 88888775 799999998754                   111221      2358899999996    


Q ss_pred             EEEEEeeCCC-ceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccc
Q psy17682        127 KEEIRKLKSQ-QALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLT  205 (490)
Q Consensus       127 ~~~~~~~~~~-g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  205 (490)
                      ..++.++..+ ..+.+|+..     .+    ....+..|.+.|.+++|+|++ ++|++++.++.+++|++.+++....  
T Consensus        55 ~~l~~~~~~~g~~v~v~d~~-----~~----~~~~~~~~~~~v~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~~~--  122 (360)
T d1k32a3          55 KVAFIHGTREGDFLGIYDYR-----TG----KAEKFEENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLETGKPTVI--  122 (360)
T ss_dssp             EEEEEEEETTEEEEEEEETT-----TC----CEEECCCCCCSEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEEEE--
T ss_pred             CEEEEEEcCCCCEEEEEECC-----CC----cEEEeeCCCceEEeeeecccc-cccceeccccccccccccccceeee--
Confidence            2223333333 478899885     22    234567899999999999998 8999999999999999988876544  


Q ss_pred             cceeeecccccCEEEEEEeeCCCCEEEEEe----------CCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEE
Q psy17682        206 EPVVDLLYHQRRVGLVLWHPTAQNVLLTAG----------SDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLT  275 (490)
Q Consensus       206 ~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  275 (490)
                           +..|...+.+++|+|+|+ +|+.+.          .++.+++||+.+++..... .+...+..++|+|+|+.|++
T Consensus       123 -----~~~~~~~~~~~~~spdg~-~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~  195 (360)
T d1k32a3         123 -----ERSREAMITDFTISDNSR-FIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT-TENSHDYAPAFDADSKNLYY  195 (360)
T ss_dssp             -----EECSSSCCCCEEECTTSC-EEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS-CSSSBEEEEEECTTSCEEEE
T ss_pred             -----eecccccccchhhcccee-eeeeeccccccceeeccccceeeeccccCceeeec-ccccccccccccCCCCEEEE
Confidence                 344888899999999996 666443          3456999999988765544 47788999999999999999


Q ss_pred             EeCCCeEEEEeCCCCcee-------eeeeecCCCceeEEEEeCCCcEEEEEeCCCc--eeEEEEecCCCCCCCeEEEecc
Q psy17682        276 TCKDKKMRIINPRTGAIE-------EEAVCHEGSKATRAIYLKSGLIFTTGFSKMS--ERQYSLRAPDHLDEPIVMVELD  346 (490)
Q Consensus       276 ~~~dg~i~iwd~~~~~~~-------~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~--~~~i~iwd~~~~~~~~~~~~~~  346 (490)
                      ++.++.+++||.......       ..+..+... ...+.+++++..++++..+..  ...+..++...+.. ..+.  .
T Consensus       196 ~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~  271 (360)
T d1k32a3         196 LSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGS-PNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDY-RMII--P  271 (360)
T ss_dssp             EESCCCCCEECSSSSCEECCSCBEEEEEESSTTC-CCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCE-EEEE--E
T ss_pred             EeCCCceEcccccccceeeccccceEEEecccCc-cccceECCCcCcccccceeecccccceeecccCcCce-eEee--e
Confidence            999999999998754322       222223322 444567777776655432111  12233333333221 1111  2


Q ss_pred             CCCceeeeeecCCC---CeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEe
Q psy17682        347 TSNGVMFPLYDPDT---NLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRL  421 (490)
Q Consensus       347 ~~~~i~~~~~s~~~---~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~  421 (490)
                      +...+..+.+.+.+   .++ ++++.++.|++||+.+++.     ..+.  +.|.+++|||||+.++++  ++.+++|++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~d~~~~~~-----~~~~--~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~  343 (360)
T d1k32a3         272 LESSILIYSVPVHGEFAAYY-QGAPEKGVLLKYDVKTRKV-----TEVK--NNLTDLRLSADRKTVMVRKDDGKIYTFPL  343 (360)
T ss_dssp             CSSEEEEEECCCCCSHHHHH-HCCCCCEEEEEEETTTCCE-----EEEE--EEEEEEEECTTSCEEEEEETTSCEEEEES
T ss_pred             cCCCceEEEEEecCCCeeEE-EecCCCCEEEEEECCCCeE-----EEec--CCcCEEEECCCCCEEEEEECCCeEEEEEC
Confidence            33444445444443   345 7788899999999988751     1122  368999999999988877  568899999


Q ss_pred             cCCC
Q psy17682        422 NNSG  425 (490)
Q Consensus       422 ~~~~  425 (490)
                      ..++
T Consensus       344 ~~~~  347 (360)
T d1k32a3         344 EKPE  347 (360)
T ss_dssp             SCTT
T ss_pred             CCCC
Confidence            8877

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.5e-23  Score=188.60  Aligned_cols=267  Identities=16%  Similarity=0.225  Sum_probs=192.8

Q ss_pred             ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcE
Q psy17682        111 STANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVV  190 (490)
Q Consensus       111 ~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i  190 (490)
                      ..|.++++...       .+++++.||.|++|++.     .   .+.+.++.+|.+.|++++|+  + ++|++|+.|+.|
T Consensus        16 ~~V~c~~~d~~-------~l~sgs~Dg~i~vWd~~-----~---~~~~~~l~~H~~~V~~v~~~--~-~~l~s~s~D~~i   77 (293)
T d1p22a2          16 KGVYCLQYDDQ-------KIVSGLRDNTIKIWDKN-----T---LECKRILTGHTGSVLCLQYD--E-RVIITGSSDSTV   77 (293)
T ss_dssp             CCEEEEECCSS-------EEEEEESSSCEEEEESS-----S---CCEEEEECCCSSCEEEEECC--S-SEEEEEETTSCE
T ss_pred             CCEEEEEEcCC-------EEEEEeCCCeEEEEECC-----C---CcEEEEEecCCCCEeeeecc--c-ceeecccccccc
Confidence            34666665433       58899999999999985     2   33567889999999999985  4 799999999999


Q ss_pred             EEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe---eEEEEecCCCcEEEEEEc
Q psy17682        191 KVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE---IMIQIECHPDIVYSASWN  267 (490)
Q Consensus       191 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~  267 (490)
                      ++|++..+........       +...  ...+.+.. ..++++..++.+++|+.....   ....+..|...+..+.+.
T Consensus        78 ~~~~~~~~~~~~~~~~-------~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  147 (293)
T d1p22a2          78 RVWDVNTGEMLNTLIH-------HCEA--VLHLRFNN-GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD  147 (293)
T ss_dssp             EEEESSSCCEEEEECC-------CCSC--EEEEECCT-TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE
T ss_pred             cccccccccccccccc-------cccc--cccccccc-cceeecccccceeEeeccccccccccccccccccccccceec
Confidence            9999988866543321       2222  23344444 378999999999999998665   344456788888888776


Q ss_pred             CCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccC
Q psy17682        268 WDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDT  347 (490)
Q Consensus       268 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~  347 (490)
                        ...+++++.|+.+++||+++++.+..+.++... +..+.++  +..+++++   .|+.|++||+++.....  ....+
T Consensus       148 --~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~-v~~~~~~--~~~l~~~~---~dg~i~i~d~~~~~~~~--~~~~~  217 (293)
T d1p22a2         148 --DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG-IACLQYR--DRLVVSGS---SDNTIRLWDIECGACLR--VLEGH  217 (293)
T ss_dssp             --TTEEEEEETTSEEEEEETTTCCEEEEEECCSSC-EEEEEEE--TTEEEEEE---TTSCEEEEETTTCCEEE--EECCC
T ss_pred             --ccccccccCCCceeeecCCCCcEEEEEcccccc-cccccCC--CCeEEEec---CCCEEEEEecccceeee--eeccc
Confidence              457889999999999999999999888877654 6655554  56788887   68999999999765322  22233


Q ss_pred             CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe-----eEEeeee-eCCCceeeEEEeeCceeEEee--cceeEEE
Q psy17682        348 SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF-----VHYINTF-QTPDPQRGIGMMPKRGCDVNS--CEIGRFF  419 (490)
Q Consensus       348 ~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~-----~~~~~~~-~~~~~i~~~~~sp~~~~l~~~--~~~~~~~  419 (490)
                      ...+.  .+++++.+| ++|+.||.|++||+......     ...+..+ .|..+|++++|++  .+++++  ++.+++|
T Consensus       218 ~~~v~--~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d~--~~l~s~s~Dg~i~iW  292 (293)
T d1p22a2         218 EELVR--CIRFDNKRI-VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE--FQIVSSSHDDTILIW  292 (293)
T ss_dssp             SSCEE--EEECCSSEE-EEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECS--SCEEECCSSSEEEEE
T ss_pred             ceeee--eccccceEE-EEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEcC--CEEEEEecCCEEEEe
Confidence            34444  456778887 78999999999998753211     0122222 3557899999964  456666  4578888


Q ss_pred             E
Q psy17682        420 R  420 (490)
Q Consensus       420 ~  420 (490)
                      +
T Consensus       293 D  293 (293)
T d1p22a2         293 D  293 (293)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.93  E-value=9.2e-23  Score=186.26  Aligned_cols=273  Identities=12%  Similarity=0.090  Sum_probs=207.6

Q ss_pred             eEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEEEeeCCCce
Q psy17682         59 VLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQA  138 (490)
Q Consensus        59 ~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~  138 (490)
                      ..++.+.|++|.+||+.+++.                  ...+...      .....++++|++.    .++++...++.
T Consensus         4 ~yV~~~~~~~v~v~D~~t~~~------------------~~~i~~g------~~p~~va~spdG~----~l~v~~~~~~~   55 (301)
T d1l0qa2           4 AYIANSESDNISVIDVTSNKV------------------TATIPVG------SNPMGAVISPDGT----KVYVANAHSND   55 (301)
T ss_dssp             EEEEETTTTEEEEEETTTTEE------------------EEEEECS------SSEEEEEECTTSS----EEEEEEGGGTE
T ss_pred             EEEEECCCCEEEEEECCCCeE------------------EEEEECC------CCceEEEEeCCCC----EEEEEECCCCE
Confidence            466788899999999998652                  1111110      1246789999862    13356778899


Q ss_pred             EEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCE
Q psy17682        139 LSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRV  218 (490)
Q Consensus       139 i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v  218 (490)
                      |.+|++.     .++   .+..+..|. .+..++|++++...++++..++.+.+|+..+++....+.        +....
T Consensus        56 i~v~d~~-----t~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~  118 (301)
T d1l0qa2          56 VSIIDTA-----TNN---VIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK--------TGKSP  118 (301)
T ss_dssp             EEEEETT-----TTE---EEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--------CSSSE
T ss_pred             EEEEECC-----CCc---eeeeeeccc-cccccccccccccccccccccceeeecccccceeeeecc--------ccccc
Confidence            9999985     222   344555664 468999999996677777888899999998876655433        55677


Q ss_pred             EEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC-CeEEEEeCCCCceeeeee
Q psy17682        219 GLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD-KKMRIINPRTGAIEEEAV  297 (490)
Q Consensus       219 ~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~  297 (490)
                      .++.|+|++..+++++..++.+.+|+..+++.+..+. +...+..++++|+++.+++++.+ +.+.+|+....+......
T Consensus       119 ~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (301)
T d1l0qa2         119 LGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS-VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK  197 (301)
T ss_dssp             EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             eEEEeecCCCeeeeeeccccceeeeeccccceeeecc-cCCCceEEEeeccccceeeecccccccccccccceeeeeccc
Confidence            8999999997666777778999999999999888887 45568899999999988887765 668888888777666665


Q ss_pred             ecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEE
Q psy17682        298 CHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFE  377 (490)
Q Consensus       298 ~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd  377 (490)
                      .+.  .+..+++++++..++++..+..++.|++||..+.+.   ...+.....+..++|+|||++|+++++.|+.|++||
T Consensus       198 ~~~--~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~---~~~~~~~~~~~~va~spdg~~l~va~~~~~~i~v~D  272 (301)
T d1l0qa2         198 VEA--APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI---TARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVID  272 (301)
T ss_dssp             CSS--EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE---EEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             ccC--CcceeeccccccccccccccceeeeeeeeecCCCeE---EEEEcCCCCEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence            443  378899999998887665444568899999988653   333444567899999999999988899999999999


Q ss_pred             ecCCC
Q psy17682        378 ITAEP  382 (490)
Q Consensus       378 ~~~~~  382 (490)
                      +.+++
T Consensus       273 ~~t~~  277 (301)
T d1l0qa2         273 TATNT  277 (301)
T ss_dssp             TTTTE
T ss_pred             CCCCe
Confidence            99986

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=6.6e-24  Score=192.97  Aligned_cols=232  Identities=7%  Similarity=0.005  Sum_probs=175.8

Q ss_pred             cccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEec
Q psy17682         40 LLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITIS  119 (490)
Q Consensus        40 l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  119 (490)
                      ..+|...|.++.|++..  .++++|.|+++++|+.....                                         
T Consensus        42 ~~~h~~~V~~~~~~~~~--~~~s~s~D~~v~~w~~~~~~-----------------------------------------   78 (287)
T d1pgua2          42 HQDHSNLIVSLDNSKAQ--EYSSISWDDTLKVNGITKHE-----------------------------------------   78 (287)
T ss_dssp             ECCCCSCEEEEECCSTT--CCEEEETTTEEEETTEEEEE-----------------------------------------
T ss_pred             CCCCCCCEEEEEecCCC--eEEEEeeccccccccccccc-----------------------------------------
Confidence            57899999999999754  58999999999999764311                                         


Q ss_pred             cccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCC
Q psy17682        120 EDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGG  199 (490)
Q Consensus       120 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~  199 (490)
                                                                  +...+.++.+++++ ..+++ +.++.+.+|+..+++
T Consensus        79 --------------------------------------------~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~  112 (287)
T d1pgua2          79 --------------------------------------------FGSQPKVASANNDG-FTAVL-TNDDDLLILQSFTGD  112 (287)
T ss_dssp             --------------------------------------------CSSCEEEEEECSSS-EEEEE-ETTSEEEEEETTTCC
T ss_pred             --------------------------------------------cccceeeeeeccCC-ceEEE-eecccceeeecccee
Confidence                                                        11235567788766 45554 456678999988887


Q ss_pred             cccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC-CcEEEEECCCCeeEEEEe-cCCCcEEEEEEcCCCCEEEEEe
Q psy17682        200 ISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-NNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWDGSKLLTTC  277 (490)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-g~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~  277 (490)
                      ....+.        +...+  .++++++. .+++++.+ +.+++|++...+....+. .|...+++++|+|++.+|++++
T Consensus       113 ~~~~~~--------~~~~~--~~~~~~~~-~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~  181 (287)
T d1pgua2         113 IIKSVR--------LNSPG--SAVSLSQN-YVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGD  181 (287)
T ss_dssp             EEEEEE--------CSSCE--EEEEECSS-EEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEE
T ss_pred             eeeecc--------cccee--eeeeccCc-ceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCcccccccc
Confidence            665432        23333  45677775 66666666 579999998776655554 4778899999999999999999


Q ss_pred             CCCeEEEEeCCCCceeee-eeecCCCceeEEEEeCC----------CcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc
Q psy17682        278 KDKKMRIINPRTGAIEEE-AVCHEGSKATRAIYLKS----------GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD  346 (490)
Q Consensus       278 ~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~s~~----------~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~  346 (490)
                      .||.|++||+.+++.... +..|... +.+++|+|.          +.++++|+   .|+.|++||+++...... ....
T Consensus       182 ~dg~i~i~d~~~~~~~~~~~~~h~~~-v~~~~~~p~~~~~~~~~~~~~~l~sgs---~D~~i~iw~~~~~~~~~~-~~~~  256 (287)
T d1pgua2         182 VMGKILLYDLQSREVKTSRWAFRTSK-INAISWKPAEKGANEEEIEEDLVATGS---LDTNIFIYSVKRPMKIIK-ALNA  256 (287)
T ss_dssp             TTSCEEEEETTTTEEEECCSCCCSSC-EEEEEECCCC------CCSCCEEEEEE---TTSCEEEEESSCTTCCEE-ETTS
T ss_pred             ccccccceeecccccccccccccccc-cceeeecccccccccccCCCCeeEeec---CCCeEEEEECCCCCeEEE-EeCC
Confidence            999999999998876554 4466654 999999875          46889998   689999999987554333 2336


Q ss_pred             CCCceeeeeecCCCCeEEEEecCCCeEEEEEe
Q psy17682        347 TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEI  378 (490)
Q Consensus       347 ~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~  378 (490)
                      |...|.+++|+|++. + ++++.|+.|++|++
T Consensus       257 h~~~V~~v~~~~~~~-l-~s~g~D~~v~iW~i  286 (287)
T d1pgua2         257 HKDGVNNLLWETPST-L-VSSGADACIKRWNV  286 (287)
T ss_dssp             STTCEEEEEEEETTE-E-EEEETTSCEEEEEE
T ss_pred             CCCCeEEEEECCCCE-E-EEEECCCeEEEEEE
Confidence            778899999999874 5 67888999999996

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=1.6e-22  Score=194.71  Aligned_cols=343  Identities=9%  Similarity=0.032  Sum_probs=222.7

Q ss_pred             EEeccCCCc-eEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEE
Q psy17682         50 VLWHPTAQN-VLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKE  128 (490)
Q Consensus        50 v~~~p~~~~-~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~  128 (490)
                      ..++.+... ++++.+.||+|+|||+.+++.                  +..+.. +     ..+..++||||+     .
T Consensus        24 ~~~~~d~~~~~~V~~~~dg~v~vwD~~t~~~------------------~~~l~~-g-----~~~~~vafSPDG-----k   74 (426)
T d1hzua2          24 QLNDLDLPNLFSVTLRDAGQIALVDGDSKKI------------------VKVIDT-G-----YAVHISRMSASG-----R   74 (426)
T ss_dssp             CCSCCCGGGEEEEEETTTTEEEEEETTTCSE------------------EEEEEC-C-----SSEEEEEECTTS-----C
T ss_pred             ccccCCCCeEEEEEEcCCCEEEEEECCCCcE------------------EEEEeC-C-----CCeeEEEECCCC-----C
Confidence            345555434 468888999999999998762                  112211 1     136789999996     2


Q ss_pred             EEEeeCCCceEEEECCCCCCCCcccCC--CCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccccc
Q psy17682        129 EIRKLKSQQALSILPPPSTAPNTGRIN--ADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTE  206 (490)
Q Consensus       129 ~~~~~~~~g~i~v~~~~~~~~~~~~~~--~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  206 (490)
                      .+++++.++.+++|++.     +++..  ..+....+|.+.+.+++|+|||..+++++..++.+++||..++.....+..
T Consensus        75 ~l~~~~~d~~v~vwd~~-----t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~  149 (426)
T d1hzua2          75 YLLVIGRDARIDMIDLW-----AKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVST  149 (426)
T ss_dssp             EEEEEETTSEEEEEETT-----SSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEEC
T ss_pred             EEEEEeCCCCEEEEEcc-----CCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeec
Confidence            44556788999999985     22211  123334578888999999999954456677899999999998877655432


Q ss_pred             ceee----ecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeE-EEEecCCCcEEEEEEcCCCCEEEEEe-CCC
Q psy17682        207 PVVD----LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIM-IQIECHPDIVYSASWNWDGSKLLTTC-KDK  280 (490)
Q Consensus       207 ~~~~----~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg  280 (490)
                      ....    ...+......+.+++++..++.+....+.+.+++....... .....+...+..++++|++++++++. .+.
T Consensus       150 ~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~  229 (426)
T d1hzua2         150 RGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSN  229 (426)
T ss_dssp             CEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCS
T ss_pred             cCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeeccc
Confidence            1111    11244456677777777644444445567777776655432 22335778899999999999877776 556


Q ss_pred             eEEEEeCCCCceeeeeeecCC-CceeEEEEeCCCc-EEEEEeCCCceeEEEEecCCCCCCC-----eEEEeccCCCceee
Q psy17682        281 KMRIINPRTGAIEEEAVCHEG-SKATRAIYLKSGL-IFTTGFSKMSERQYSLRAPDHLDEP-----IVMVELDTSNGVMF  353 (490)
Q Consensus       281 ~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~s~~~~-~l~~~~~~~~~~~i~iwd~~~~~~~-----~~~~~~~~~~~i~~  353 (490)
                      .+.+++..+++.......... .......+...+. .+.... ...++.+.+|+.......     .......|...+..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~  308 (426)
T d1hzua2         230 KVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTS-HLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLF  308 (426)
T ss_dssp             EEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEE-CTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCC
T ss_pred             ceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEec-cCCCceEEEeeccccccccccceEeEEEecCCCceeE
Confidence            799999999988777653221 1122333333322 222221 124778888876653211     11222356677999


Q ss_pred             eeecCCCCeEEE------EecCCCeEEEEEecCCCCeeEEee------eeeCCCceeeEEEeeCceeEEee-------cc
Q psy17682        354 PLYDPDTNLVYL------CGKGDSVIRYFEITAEPPFVHYIN------TFQTPDPQRGIGMMPKRGCDVNS-------CE  414 (490)
Q Consensus       354 ~~~s~~~~~l~~------~g~~dg~i~iwd~~~~~~~~~~~~------~~~~~~~i~~~~~sp~~~~l~~~-------~~  414 (490)
                      ++|+||+++|++      +++.|++|+|||+.+++...+.+.      .-.+...+.+++|||||+.++.+       ++
T Consensus       309 v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~  388 (426)
T d1hzua2         309 IKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSS  388 (426)
T ss_dssp             EECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCC
T ss_pred             EEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCC
Confidence            999999999954      456688999999999875433321      11234568899999999865332       33


Q ss_pred             eeEEEEecCCCce
Q psy17682        415 IGRFFRLNNSGLC  427 (490)
Q Consensus       415 ~~~~~~~~~~~~~  427 (490)
                      .+++|+..+.++.
T Consensus       389 ~i~v~D~~T~k~~  401 (426)
T d1hzua2         389 ALVVVDDKTLKLK  401 (426)
T ss_dssp             EEEEEETTTTEEE
T ss_pred             eEEEEECCCCeEE
Confidence            6899998888733

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=3.4e-23  Score=199.48  Aligned_cols=338  Identities=12%  Similarity=0.077  Sum_probs=216.0

Q ss_pred             eeeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccC
Q psy17682         24 RLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGG  103 (490)
Q Consensus        24 ~~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (490)
                      ++.+|+..+ .+.+.++..|. .+..++|+|+| ++|++++.|++|++||+.+++...                ...+..
T Consensus        43 ~v~vwD~~t-~~~~~~l~~g~-~~~~vafSPDG-k~l~~~~~d~~v~vwd~~t~~~~~----------------~~~i~~  103 (426)
T d1hzua2          43 QIALVDGDS-KKIVKVIDTGY-AVHISRMSASG-RYLLVIGRDARIDMIDLWAKEPTK----------------VAEIKI  103 (426)
T ss_dssp             EEEEEETTT-CSEEEEEECCS-SEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCEE----------------EEEEEC
T ss_pred             EEEEEECCC-CcEEEEEeCCC-CeeEEEECCCC-CEEEEEeCCCCEEEEEccCCceeE----------------EEEEeC
Confidence            467777765 36667787775 58999999999 889999999999999999865211                111111


Q ss_pred             CCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccC-----------CeeEEE
Q psy17682        104 KGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKG-----------PVLDIA  172 (490)
Q Consensus       104 ~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~-----------~V~~~~  172 (490)
                        .......+.+++|+||+  +  .+++++..++.+.+|+...        ......+.+|..           ....+.
T Consensus       104 --~~~~~~~~~s~~~spDG--~--~l~v~~~~~~~v~i~d~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  169 (426)
T d1hzua2         104 --GIEARSVESSKFKGYED--R--YTIAGAYWPPQFAIMDGET--------LEPKQIVSTRGMTVDTQTYHPEPRVAAII  169 (426)
T ss_dssp             --CSEEEEEEECCSTTCTT--T--EEEEEEEESSEEEEEETTT--------CCEEEEEECCEECSSSCCEESCCCEEEEE
T ss_pred             --CCCCcceEEeeeecCCC--C--EEEEeecCCCeEEEEcCCc--------cceeEEeeccCCCccceeecCCCceeEEE
Confidence              11122234566777775  2  2345566789999998852        112333344443           444555


Q ss_pred             ECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEE
Q psy17682        173 WSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMI  252 (490)
Q Consensus       173 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~  252 (490)
                      +++++..++.+....+.+.+++..+.....      .....+...+..+.|+|+++.++++...+..+.+++..+++.+.
T Consensus       170 ~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~  243 (426)
T d1hzua2         170 ASHEHPEFIVNVKETGKVLLVNYKDIDNLT------VTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSA  243 (426)
T ss_dssp             ECSSSSEEEEEETTTTEEEEEECSSSSSCE------EEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEE
T ss_pred             ECCCCCEEEEecCCCCeEEEEEecccccee------eEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEE
Confidence            555553333333334455555544433221      12234778899999999997555555667889999999998887


Q ss_pred             EEecC--CCcEEEEEEcCCCC-EE--EEEeCCCeEEEEeCCC-------CceeeeeeecCCCceeEEEEeCCCcEEEEEe
Q psy17682        253 QIECH--PDIVYSASWNWDGS-KL--LTTCKDKKMRIINPRT-------GAIEEEAVCHEGSKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       253 ~~~~~--~~~v~~~~~~~~~~-~l--~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~  320 (490)
                      .....  ........+...+. .+  +..+.|+.+.+|+...       ++...++.+|... +..++|+|++++|++..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~-v~~v~~sPdg~~l~v~~  322 (426)
T d1hzua2         244 LVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGG-SLFIKTHPKSSHLYVDT  322 (426)
T ss_dssp             EEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSC-CCCEECCTTCSEEEECC
T ss_pred             EeccCCcccccceeeeecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCc-eeEEEcCCCCceEEEee
Confidence            76522  22222333333332 22  2234577888887654       3667778888765 88999999999999632


Q ss_pred             C----CCceeEEEEecCCCCCCCeEEEec-------cCCCceeeeeecCCCCeEEEEe----cCCCeEEEEEecCCCCee
Q psy17682        321 S----KMSERQYSLRAPDHLDEPIVMVEL-------DTSNGVMFPLYDPDTNLVYLCG----KGDSVIRYFEITAEPPFV  385 (490)
Q Consensus       321 ~----~~~~~~i~iwd~~~~~~~~~~~~~-------~~~~~i~~~~~s~~~~~l~~~g----~~dg~i~iwd~~~~~~~~  385 (490)
                      .    ...+++|++||+.+++....+...       .+...+.+++|||||+++++++    +.++.|+|||..+.+   
T Consensus       323 ~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k---  399 (426)
T d1hzua2         323 TFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK---  399 (426)
T ss_dssp             TTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTE---
T ss_pred             cCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCe---
Confidence            1    114788999999988765554321       3445689999999999887664    468899999999986   


Q ss_pred             EEeeeeeCCCceeeEEEeeCceeEE
Q psy17682        386 HYINTFQTPDPQRGIGMMPKRGCDV  410 (490)
Q Consensus       386 ~~~~~~~~~~~i~~~~~sp~~~~l~  410 (490)
                       ........ +    .++|+|++.+
T Consensus       400 -~~~~i~~~-~----~~tp~Gk~~~  418 (426)
T d1hzua2         400 -LKAVVKDP-R----LITPTGKFNV  418 (426)
T ss_dssp             -EEEEECCT-T----CCSEEEEEEH
T ss_pred             -EEEEECCC-C----ccCCCceEeE
Confidence             22323322 1    3468888744

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.92  E-value=7.8e-22  Score=179.99  Aligned_cols=271  Identities=12%  Similarity=0.110  Sum_probs=203.7

Q ss_pred             EeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceee
Q psy17682        131 RKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD  210 (490)
Q Consensus       131 ~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~  210 (490)
                      ++...++.|.+|++.     +++   .+..+.. ...+..++|+|+|..++++++.++.|++||+.+++.+..+.     
T Consensus         6 V~~~~~~~v~v~D~~-----t~~---~~~~i~~-g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~-----   71 (301)
T d1l0qa2           6 IANSESDNISVIDVT-----SNK---VTATIPV-GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP-----   71 (301)
T ss_dssp             EEETTTTEEEEEETT-----TTE---EEEEEEC-SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-----
T ss_pred             EEECCCCEEEEEECC-----CCe---EEEEEEC-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeee-----
Confidence            356788999999985     333   2333432 35678999999994445677889999999999887766543     


Q ss_pred             ecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEE-EeCCCeEEEEeCCC
Q psy17682        211 LLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLT-TCKDKKMRIINPRT  289 (490)
Q Consensus       211 ~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~~~  289 (490)
                        .+ ..+..+.|++++..+++++..++.+.+|+..+++....+. +.....++.++|+++.++. +..++.+.+|+..+
T Consensus        72 --~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~  147 (301)
T d1l0qa2          72 --AG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT  147 (301)
T ss_dssp             --CS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred             --cc-ccccccccccccccccccccccceeeecccccceeeeecc-ccccceEEEeecCCCeeeeeeccccceeeeeccc
Confidence              23 3578999999997667777788899999999999888887 4566789999999987754 45678899999999


Q ss_pred             CceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEe--
Q psy17682        290 GAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCG--  367 (490)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g--  367 (490)
                      .+....+..+..  +..+.++|++..++++..  ..+.+.+|+.....   .............++|+++++.+++++  
T Consensus       148 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~v~~~~  220 (301)
T d1l0qa2         148 KAVINTVSVGRS--PKGIAVTPDGTKVYVANF--DSMSISVIDTVTNS---VIDTVKVEAAPSGIAVNPEGTKAYVTNVD  220 (301)
T ss_dssp             TEEEEEEECCSS--EEEEEECTTSSEEEEEET--TTTEEEEEETTTTE---EEEEEECSSEEEEEEECTTSSEEEEEEEC
T ss_pred             cceeeecccCCC--ceEEEeeccccceeeecc--ccccccccccccee---eeecccccCCcceeecccccccccccccc
Confidence            988887775543  788999999888777763  34667777776543   223334456678899999999986654  


Q ss_pred             cCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeE-Eee--cceeEEEEecCCCceEEE
Q psy17682        368 KGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCD-VNS--CEIGRFFRLNNSGLCQVV  430 (490)
Q Consensus       368 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l-~~~--~~~~~~~~~~~~~~~~~i  430 (490)
                      ..++.|++||+.+++    .+..+..+..+.+++|+|||+++ +++  ++.+++|++.+++.+..+
T Consensus       221 ~~~~~v~v~D~~t~~----~~~~~~~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~  282 (301)
T d1l0qa2         221 KYFNTVSMIDTGTNK----ITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATM  282 (301)
T ss_dssp             SSCCEEEEEETTTTE----EEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             ceeeeeeeeecCCCe----EEEEEcCCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEE
Confidence            345789999999886    34445555678999999999865 454  457899999988744443

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.91  E-value=2.6e-23  Score=200.01  Aligned_cols=326  Identities=9%  Similarity=-0.025  Sum_probs=214.9

Q ss_pred             ceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEEEeeCCCc
Q psy17682         58 NVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQ  137 (490)
Q Consensus        58 ~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g  137 (490)
                      .++++.+.||+|.|||..+++.                  ...+..      ...+..++||||+     ..+++++.++
T Consensus        33 ~~~v~~~d~g~v~v~D~~t~~v------------------~~~~~~------g~~~~~v~fSpDG-----~~l~~~s~dg   83 (432)
T d1qksa2          33 LFSVTLRDAGQIALIDGSTYEI------------------KTVLDT------GYAVHISRLSASG-----RYLFVIGRDG   83 (432)
T ss_dssp             EEEEEETTTTEEEEEETTTCCE------------------EEEEEC------SSCEEEEEECTTS-----CEEEEEETTS
T ss_pred             EEEEEEcCCCEEEEEECCCCcE------------------EEEEeC------CCCeeEEEECCCC-----CEEEEEcCCC
Confidence            4568999999999999998762                  222211      1147789999996     2344567799


Q ss_pred             eEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceee----ecc
Q psy17682        138 ALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD----LLY  213 (490)
Q Consensus       138 ~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----~~~  213 (490)
                      .+.+|++.....   .....+....+|.+.+.+..|+|||..++++++.+++|++||..+++.+..+......    ...
T Consensus        84 ~v~~~d~~t~~~---~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~  160 (432)
T d1qksa2          84 KVNMIDLWMKEP---TTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYH  160 (432)
T ss_dssp             EEEEEETTSSSC---CEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEE
T ss_pred             CEEEEEeeCCCc---eEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceecc
Confidence            999999852111   1111233445788888889999999545688999999999999999877654322111    122


Q ss_pred             cccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-cCCCcEEEEEEcCCCCEEEEEeC-CCeEEEEeCCCCc
Q psy17682        214 HQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWDGSKLLTTCK-DKKMRIINPRTGA  291 (490)
Q Consensus       214 ~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~  291 (490)
                      +......+.++|++..++++...++.|.+||..+.+...... .+...+..++|+|+|+++++++. ++.+.++|..+++
T Consensus       161 ~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~  240 (432)
T d1qksa2         161 PEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK  240 (432)
T ss_dssp             SCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred             CCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccce
Confidence            566778899999997666777888999999998876544332 35667899999999998877765 5679999999888


Q ss_pred             eeeeeeecC----CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe----EEEec-c----------CCCc--
Q psy17682        292 IEEEAVCHE----GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI----VMVEL-D----------TSNG--  350 (490)
Q Consensus       292 ~~~~~~~~~----~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~----~~~~~-~----------~~~~--  350 (490)
                      ....+....    ........+...+...++...  .++.+.+|+........    ..... .          +...  
T Consensus       241 ~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~l--g~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~  318 (432)
T d1qksa2         241 LVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHM--GDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQY  318 (432)
T ss_dssp             EEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBS--SSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSE
T ss_pred             EEEEeccCccccccCcccceecCCCCceeccccc--CCceEEecccccccccccccEEEEEEEcCCCCeEEEEecCCccc
Confidence            776654211    111333344444555544431  36778888765432110    00000 0          0000  


Q ss_pred             -------------eeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee-----
Q psy17682        351 -------------VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS-----  412 (490)
Q Consensus       351 -------------i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-----  412 (490)
                                   ..++++ ||++.+ ++++.|+.+++|++.++..+      ..++..+.+++|||||+.++.+     
T Consensus       319 lw~~~~~~~~~~~~~sv~v-pDg~~l-a~~s~d~~~k~w~~~~~~~l------~~~~~~v~~~~fS~DG~~v~~S~~~~~  390 (432)
T d1qksa2         319 LYVDATLNPEAEISGSVAV-FDIKAM-TGDGSDPEFKTLPIAEWAGI------TEGQPRVVQGEFNKDGTEVWFSVWNGK  390 (432)
T ss_dssp             EEEECTTCSSHHHHTCEEE-EEGGGC-CCSSSCCCEEEECHHHHHTC------CSSCCEEEEEEECTTSSEEEEEEECCT
T ss_pred             eeecccCCCCCCeeeEEEE-Eechhh-cccccCCceEeccccccccc------CCCCCcEEEeEECCCCCEEEEEEecCC
Confidence                         112332 677777 67788888888887665311      1355678899999999876544     


Q ss_pred             --cceeEEEEecCCC
Q psy17682        413 --CEIGRFFRLNNSG  425 (490)
Q Consensus       413 --~~~~~~~~~~~~~  425 (490)
                        ++.+.+|+..+.+
T Consensus       391 ~~~g~i~i~D~~T~k  405 (432)
T d1qksa2         391 DQESALVVVDDKTLE  405 (432)
T ss_dssp             TSCCEEEEEETTTTE
T ss_pred             CCCCcEEEEECCCce
Confidence              2357888888877

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.90  E-value=2.2e-23  Score=195.58  Aligned_cols=297  Identities=10%  Similarity=-0.014  Sum_probs=204.6

Q ss_pred             eeeeeccCCCCCcEEecccccceeeeEEeccCCCceEEeeeCC--CeEEEEeCCCCCCCCCCCccccceeccccceeecc
Q psy17682         24 RLTYFSPRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGKE--AEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKV  101 (490)
Q Consensus        24 ~~~~~~~~~~~~~~~~l~gH~~~V~~v~~~p~~~~~l~s~~~D--~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (490)
                      ++..|+...  .....+ +|...|.+++|+|++ +.|+++|.|  ..|++||+.+++..                  . .
T Consensus        25 ~v~v~d~~~--~~~~~~-~~~~~v~~~~~spDg-~~l~~~~~~~g~~v~v~d~~~~~~~------------------~-~   81 (360)
T d1k32a3          25 QAFIQDVSG--TYVLKV-PEPLRIRYVRRGGDT-KVAFIHGTREGDFLGIYDYRTGKAE------------------K-F   81 (360)
T ss_dssp             EEEEECTTS--SBEEEC-SCCSCEEEEEECSSS-EEEEEEEETTEEEEEEEETTTCCEE------------------E-C
T ss_pred             eEEEEECCC--CcEEEc-cCCCCEEEEEECCCC-CEEEEEEcCCCCEEEEEECCCCcEE------------------E-e
Confidence            456666543  334444 799999999999999 666665544  37999999886511                  1 1


Q ss_pred             cCCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEE
Q psy17682        102 GGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVI  181 (490)
Q Consensus       102 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l  181 (490)
                      .     .....+..++|+|+.     ..++++..++.+.+|+..     .   ......+..|...+.+++|+|+| .+|
T Consensus        82 ~-----~~~~~v~~~~~spdg-----~~l~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~spdg-~~l  142 (360)
T d1k32a3          82 E-----ENLGNVFAMGVDRNG-----KFAVVANDRFEIMTVDLE-----T---GKPTVIERSREAMITDFTISDNS-RFI  142 (360)
T ss_dssp             C-----CCCCSEEEEEECTTS-----SEEEEEETTSEEEEEETT-----T---CCEEEEEECSSSCCCCEEECTTS-CEE
T ss_pred             e-----CCCceEEeeeecccc-----cccceecccccccccccc-----c---cceeeeeecccccccchhhccce-eee
Confidence            1     123357899999996     367778999999999985     2   22345677899999999999998 677


Q ss_pred             EEE----------eCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCee-
Q psy17682        182 ASG----------SEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEI-  250 (490)
Q Consensus       182 ~s~----------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~-  250 (490)
                      +.+          ..++.+++|++.+++...        +..+...+..++|+|+|+ .|++++.++.+++||...... 
T Consensus       143 a~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~--------~~~~~~~~~~~~~spdg~-~l~~~s~~~~~~~~d~~~~~~~  213 (360)
T d1k32a3         143 AYGFPLKHGETDGYVMQAIHVYDMEGRKIFA--------ATTENSHDYAPAFDADSK-NLYYLSYRSLDPSPDRVVLNFS  213 (360)
T ss_dssp             EEEEEECSSTTCSCCEEEEEEEETTTTEEEE--------CSCSSSBEEEEEECTTSC-EEEEEESCCCCCEECSSSSCEE
T ss_pred             eeeccccccceeeccccceeeeccccCceee--------ecccccccccccccCCCC-EEEEEeCCCceEccccccccee
Confidence            654          344579999998765433        233777889999999996 899999999999999765432 


Q ss_pred             ------EEEEecCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCceeeeeeecCCCceeEEEEeCC---CcEE
Q psy17682        251 ------MIQIECHPDIVYSASWNWDGSKLLTTCKDK-----KMRIINPRTGAIEEEAVCHEGSKATRAIYLKS---GLIF  316 (490)
Q Consensus       251 ------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~---~~~l  316 (490)
                            ...+..+...+..+.|++++..++++..+.     .+..+++..+.. ..+..+.+. +..+.+...   +.++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~  291 (360)
T d1k32a3         214 FEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDY-RMIIPLESS-ILIYSVPVHGEFAAYY  291 (360)
T ss_dssp             CCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCE-EEEEECSSE-EEEEECCCCCSHHHHH
T ss_pred             eccccceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCce-eEeeecCCC-ceEEEEEecCCCeeEE
Confidence                  233344555556667777777666554332     244444444433 223333332 444444443   3355


Q ss_pred             EEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCC
Q psy17682        317 TTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPP  383 (490)
Q Consensus       317 ~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~  383 (490)
                      +++.   .++.+++||+.+.+.    .  .+...+..++|||||++| ++++.||.|++||+..++.
T Consensus       292 ~~~~---~~~~i~~~d~~~~~~----~--~~~~~v~~~~~SpDG~~l-~~~~~Dg~i~v~d~~~~~~  348 (360)
T d1k32a3         292 QGAP---EKGVLLKYDVKTRKV----T--EVKNNLTDLRLSADRKTV-MVRKDDGKIYTFPLEKPED  348 (360)
T ss_dssp             HCCC---CCEEEEEEETTTCCE----E--EEEEEEEEEEECTTSCEE-EEEETTSCEEEEESSCTTS
T ss_pred             EecC---CCCEEEEEECCCCeE----E--EecCCcCEEEECCCCCEE-EEEECCCeEEEEECCCCCc
Confidence            5555   688999999987542    1  122458899999999999 7888999999999998863

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.88  E-value=5e-21  Score=177.36  Aligned_cols=252  Identities=11%  Similarity=0.058  Sum_probs=174.4

Q ss_pred             ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe--------
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG--------  235 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~--------  235 (490)
                      +...+.+++|+|||..++++++.++.|.+||+.+++.+..+..+.  ...+...+..++|+|+++ .++++.        
T Consensus        32 ~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~--~~~~~~~~~~v~~s~dg~-~l~~~~~~~~~~~~  108 (337)
T d1pbyb_          32 AGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLST--PEERVKSLFGAALSPDGK-TLAIYESPVRLELT  108 (337)
T ss_dssp             CTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCB--TTEEEECTTCEEECTTSS-EEEEEEEEEEECSS
T ss_pred             CCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCC--CcccccceeeEEEcCCCc-EEEEeecCCcceee
Confidence            345577899999994344677889999999999998876654321  111233456799999996 666554        


Q ss_pred             ----CCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeC
Q psy17682        236 ----SDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLK  311 (490)
Q Consensus       236 ----~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~  311 (490)
                          .+..+.+||..+++....+. +...+..++|+|+|+++++++.  .+.+||..+++....+..+...  ....+++
T Consensus       109 ~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~--~~~~~d~~~~~~~~~~~~~~~~--~~~~~~~  183 (337)
T d1pbyb_         109 HFEVQPTRVALYDAETLSRRKAFE-APRQITMLAWARDGSKLYGLGR--DLHVMDPEAGTLVEDKPIQSWE--AETYAQP  183 (337)
T ss_dssp             CEEECCCEEEEEETTTTEEEEEEE-CCSSCCCEEECTTSSCEEEESS--SEEEEETTTTEEEEEECSTTTT--TTTBCCC
T ss_pred             eccccccceeeccccCCeEEEecc-ccCCceEEEEcCCCCEEEEEcC--CcceeeeecCcEEEEeecCCcc--ccceecC
Confidence                46789999999999888887 4566889999999999998864  4778999998877776533221  1111122


Q ss_pred             CCcE----------EE----EEe-------CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCC
Q psy17682        312 SGLI----------FT----TGF-------SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGD  370 (490)
Q Consensus       312 ~~~~----------l~----~~~-------~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d  370 (490)
                      ++..          ..    ...       ....++.+.+|+..++.... .....+......+.++|++.+++ ++  +
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~--~  259 (337)
T d1pbyb_         184 DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAM-REVRIMDVFYFSTAVNPAKTRAF-GA--Y  259 (337)
T ss_dssp             BCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEE-EEEEECSSCEEEEEECTTSSEEE-EE--E
T ss_pred             CcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEE-EEecCCCcceEEEEecccceEEE-Ec--c
Confidence            1110          00    000       00135678889988765322 22234556678889999999984 33  6


Q ss_pred             CeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCCceEEEE
Q psy17682        371 SVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSGLCQVVS  431 (490)
Q Consensus       371 g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~~~~~i~  431 (490)
                      +.|++||+.+++    .+........+.+++|+|||.+++++  ++.+++|++.+.+.+..+.
T Consensus       260 ~~i~v~d~~~~~----~~~~~~~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~  318 (337)
T d1pbyb_         260 NVLESFDLEKNA----SIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVD  318 (337)
T ss_dssp             SEEEEEETTTTE----EEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred             ccEEEEECCCCc----EEEEEcCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEEEE
Confidence            899999999987    44444556678999999999887766  4478999999887555443

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=2.9e-19  Score=165.21  Aligned_cols=287  Identities=11%  Similarity=0.063  Sum_probs=195.0

Q ss_pred             EEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEE-EEEeCCCcEEEEECCCCCcccccccc
Q psy17682        129 EIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVI-ASGSEDCVVKVWQIPDGGISRTLTEP  207 (490)
Q Consensus       129 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~  207 (490)
                      +.+++..++.|++|++.    ..+.+ ..++. ..|.+.|.+|+|+||| ++| +++..|+.|++|++........+.. 
T Consensus         6 v~v~~~~~~~I~v~~~~----~~~~l-~~~~~-~~~~~~v~~la~spDG-~~L~v~~~~d~~i~~~~i~~~~~~~~~~~-   77 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLN----HEGAL-TLTQV-VDVPGQVQPMVVSPDK-RYLYVGVRPEFRVLAYRIAPDDGALTFAA-   77 (333)
T ss_dssp             EEEEEGGGTEEEEEEEC----TTSCE-EEEEE-EECSSCCCCEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEEEEE-
T ss_pred             EEEECCCCCcEEEEEEc----CCCCe-EEEEE-EcCCCCEeEEEEeCCC-CEEEEEECCCCeEEEEEEeCCCCcEEEee-
Confidence            45667789999999986    22221 11222 3688999999999999 555 5556689999999987654332211 


Q ss_pred             eeeecccccCEEEEEEeeCCCCEEEEEe-CCCcEEEEECCCCeeEEE--EecCCCcEEEEEEcCCCCEEEEEeC-CCeEE
Q psy17682        208 VVDLLYHQRRVGLVLWHPTAQNVLLTAG-SDNNVAIWNVGTGEIMIQ--IECHPDIVYSASWNWDGSKLLTTCK-DKKMR  283 (490)
Q Consensus       208 ~~~~~~~~~~v~~~~~~p~~~~~l~s~~-~dg~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~  283 (490)
                         ...+...+..++|+|+|+ +|++++ .++.|.+|+.........  ...+...+.++.++|+++++++++. +..+.
T Consensus        78 ---~~~~~~~p~~l~~spDg~-~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~  153 (333)
T d1ri6a_          78 ---ESALPGSLTHISTDHQGQ-FVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRIC  153 (333)
T ss_dssp             ---EEECSSCCSEEEECTTSS-EEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEE
T ss_pred             ---ecccCCCceEEEEcCCCC-EEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceee
Confidence               112445577899999996 666665 477899998876654433  3356677889999999998888774 46799


Q ss_pred             EEeCCCCceeeee-----eecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE-Eec-------cCCCc
Q psy17682        284 IINPRTGAIEEEA-----VCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM-VEL-------DTSNG  350 (490)
Q Consensus       284 iwd~~~~~~~~~~-----~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~-~~~-------~~~~~  350 (490)
                      +|+..........     ....+.....++|++++..+......  .+...+++.......... ...       .....
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (333)
T d1ri6a_         154 LFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL--NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRW  231 (333)
T ss_dssp             EEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT--TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCC
T ss_pred             EEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEeeccc--cCceEEEeecccccceeeeeeeeeeecCCCcccc
Confidence            9998765433221     12233347889999999887766543  345555555433322211 111       12234


Q ss_pred             eeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec---ceeEEEEecC--CC
Q psy17682        351 VMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC---EIGRFFRLNN--SG  425 (490)
Q Consensus       351 i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~---~~~~~~~~~~--~~  425 (490)
                      ...++++++++++++++..++.+.+|++..................+++++|+|||+++++++   +.+++|+++.  +.
T Consensus       232 ~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~  311 (333)
T d1ri6a_         232 AADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGL  311 (333)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTE
T ss_pred             ceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCc
Confidence            667889999999988888999999999987765555554445556788999999999876653   4789997754  44


Q ss_pred             ceEEE
Q psy17682        426 LCQVV  430 (490)
Q Consensus       426 ~~~~i  430 (490)
                       ++++
T Consensus       312 -l~~~  315 (333)
T d1ri6a_         312 -LHEK  315 (333)
T ss_dssp             -EEEE
T ss_pred             -EEEE
Confidence             5544

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.86  E-value=9.1e-21  Score=176.29  Aligned_cols=251  Identities=9%  Similarity=-0.044  Sum_probs=168.9

Q ss_pred             ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe--------
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG--------  235 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~--------  235 (490)
                      |...+.+++|+|||..++++++.++.|++||+.+++.+..+.... ....+...+..++|+|+|+ ++++++        
T Consensus        38 ~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~-~~~~~~~~~~~v~~s~DG~-~l~v~~~~~~~~~~  115 (346)
T d1jmxb_          38 DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSS-VPGEVGRSMYSFAISPDGK-EVYATVNPTQRLND  115 (346)
T ss_dssp             SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCC-STTEEEECSSCEEECTTSS-EEEEEEEEEEECSS
T ss_pred             CCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccc-cccccCCceEEEEEecCCC-EEEEEecCCcceee
Confidence            445677999999995455777789999999999987766543211 0111233466899999996 565553        


Q ss_pred             ----CCCcEEEEECCCCeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEE
Q psy17682        236 ----SDNNVAIWNVGTGEIMIQIE--CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIY  309 (490)
Q Consensus       236 ----~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  309 (490)
                          .++.+.+|+..+++....+.  .....+..+.++++++.+++   ++.+.+|++.+++.+..+..+..  ...+.+
T Consensus       116 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  190 (346)
T d1jmxb_         116 HYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVA---GPDIYKMDVKTGKYTVALPLRNW--NRKGYS  190 (346)
T ss_dssp             CEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEE---SSSEEEECTTTCCEEEEECSTTC--CCTTBC
T ss_pred             eeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEe---CCcceEEEccCCCEEEEEecCCC--ccceEE
Confidence                46788999988776543332  13345666777777776654   35689999999988877654332  223333


Q ss_pred             eCCCcE--------------------------EEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeE
Q psy17682        310 LKSGLI--------------------------FTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLV  363 (490)
Q Consensus       310 s~~~~~--------------------------l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  363 (490)
                      +|++..                          +.++.   ....+.+|+..+...... ....+...+..+.+++++.++
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  266 (346)
T d1jmxb_         191 APDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATAD---LLYGYLSVDLKTGKTHTQ-EFADLTELYFTGLRSPKDPNQ  266 (346)
T ss_dssp             CCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCE---EEEEEEEEETTTCCEEEE-EEEECSSCEEEEEECSSCTTE
T ss_pred             eccccEEEEEecCCCceEeeeeeeeeccCceeEeecc---CCceEEEEECCCCceEEE-EeecccceeEEEEEeCCCCEE
Confidence            443322                          22222   456788888887553222 233456678889999999888


Q ss_pred             EEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecCCCceEEEE
Q psy17682        364 YLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSGLCQVVS  431 (490)
Q Consensus       364 ~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~~~~~i~  431 (490)
                      + ... ++.|.+||..+++    .+.....+..+.+++|+|||++++++  ++.+++|++.+.+.+..+.
T Consensus       267 ~-~~~-~~~v~v~d~~~~~----~~~~~~~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~  330 (346)
T d1jmxb_         267 I-YGV-LNRLAKYDLKQRK----LIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK  330 (346)
T ss_dssp             E-EEE-ESEEEEEETTTTE----EEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEE
T ss_pred             E-Eec-CCeEEEEECCCCc----EEEEEcCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEEEE
Confidence            4 443 5679999999986    44444555689999999999888876  4588999999887555444

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.83  E-value=2.3e-18  Score=165.19  Aligned_cols=274  Identities=7%  Similarity=-0.157  Sum_probs=184.8

Q ss_pred             EEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccce
Q psy17682        129 EIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPV  208 (490)
Q Consensus       129 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  208 (490)
                      ++++...+|.+.+|+..     +   .+.+..+..| ..+..++|+||| +++++++.|++|++||+.+++......  +
T Consensus        34 ~~v~~~d~g~v~v~D~~-----t---~~v~~~~~~g-~~~~~v~fSpDG-~~l~~~s~dg~v~~~d~~t~~~~~~~~--i  101 (432)
T d1qksa2          34 FSVTLRDAGQIALIDGS-----T---YEIKTVLDTG-YAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTVAE--I  101 (432)
T ss_dssp             EEEEETTTTEEEEEETT-----T---CCEEEEEECS-SCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEEEE--E
T ss_pred             EEEEEcCCCEEEEEECC-----C---CcEEEEEeCC-CCeeEEEECCCC-CEEEEEcCCCCEEEEEeeCCCceEEEE--E
Confidence            45778899999999985     3   3345566666 469999999999 899999999999999998876433211  1


Q ss_pred             eeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEec-----------CCCcEEEEEEcCCCCEE-EEE
Q psy17682        209 VDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIEC-----------HPDIVYSASWNWDGSKL-LTT  276 (490)
Q Consensus       209 ~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l-~~~  276 (490)
                      ....+|.+.+.+..|+|||+.++++++.++.|++||..+++++..+..           +......+.++|++..+ ++.
T Consensus       102 ~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~  181 (432)
T d1qksa2         102 KIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV  181 (432)
T ss_dssp             ECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred             ecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEE
Confidence            112346666777788899975568888999999999999998877653           34556788999999765 455


Q ss_pred             eCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEec---cCCCceee
Q psy17682        277 CKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL---DTSNGVMF  353 (490)
Q Consensus       277 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~---~~~~~i~~  353 (490)
                      ..++.|.+||..+.+.......+.+..+..++|+|+|+++++++.  ....+.++|..+..........   .+......
T Consensus       182 ~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~--~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~  259 (432)
T d1qksa2         182 KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN--ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN  259 (432)
T ss_dssp             TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG--GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE
T ss_pred             ccCCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEecc--ccceEEEeecccceEEEEeccCccccccCcccc
Confidence            678999999999887665555444445899999999998877763  4668999998875432222111   12223334


Q ss_pred             eeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEee--cceeEEEEecC
Q psy17682        354 PLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNN  423 (490)
Q Consensus       354 ~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~  423 (490)
                      ..+...+.........++.|.+|+......       ..+...+....++|++..+++.  .+..++|....
T Consensus       260 ~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~-------~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~  324 (432)
T d1qksa2         260 FVHPTFGPVWATSHMGDDSVALIGTDPEGH-------PDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDAT  324 (432)
T ss_dssp             EEETTTEEEEEEEBSSSSEEEEEECCTTTC-------TTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECT
T ss_pred             eecCCCCceecccccCCceEEecccccccc-------cccccEEEEEEEcCCCCeEEEEecCCccceeeccc
Confidence            444444444423334578888887765431       1122345566666665433332  34555665443

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=6.9e-18  Score=155.82  Aligned_cols=306  Identities=9%  Similarity=0.036  Sum_probs=194.2

Q ss_pred             ceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEEEeeCCCc
Q psy17682         58 NVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQ  137 (490)
Q Consensus        58 ~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g  137 (490)
                      .++++++.|++|++|++......               ........      ...+..++||||+  ++  +.+++..++
T Consensus         5 ~v~v~~~~~~~I~v~~~~~~~~l---------------~~~~~~~~------~~~v~~la~spDG--~~--L~v~~~~d~   59 (333)
T d1ri6a_           5 TVYIASPESQQIHVWNLNHEGAL---------------TLTQVVDV------PGQVQPMVVSPDK--RY--LYVGVRPEF   59 (333)
T ss_dssp             EEEEEEGGGTEEEEEEECTTSCE---------------EEEEEEEC------SSCCCCEEECTTS--SE--EEEEETTTT
T ss_pred             EEEEECCCCCcEEEEEEcCCCCe---------------EEEEEEcC------CCCEeEEEEeCCC--CE--EEEEECCCC
Confidence            46788899999999998753300               11111111      2257899999996  22  234566789


Q ss_pred             eEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe-CCCcEEEEECCCCCcccccccceeeeccccc
Q psy17682        138 ALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS-EDCVVKVWQIPDGGISRTLTEPVVDLLYHQR  216 (490)
Q Consensus       138 ~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  216 (490)
                      .|.+|++..    ..... .......+...+..++|+|+| ++|++++ .++.|.+|+..........     ....+..
T Consensus        60 ~i~~~~i~~----~~~~~-~~~~~~~~~~~p~~l~~spDg-~~l~v~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~~  128 (333)
T d1ri6a_          60 RVLAYRIAP----DDGAL-TFAAESALPGSLTHISTDHQG-QFVFVGSYNAGNVSVTRLEDGLPVGVV-----DVVEGLD  128 (333)
T ss_dssp             EEEEEEECT----TTCCE-EEEEEEECSSCCSEEEECTTS-SEEEEEETTTTEEEEEEEETTEEEEEE-----EEECCCT
T ss_pred             eEEEEEEeC----CCCcE-EEeeecccCCCceEEEEcCCC-CEEeecccCCCceeeeccccccceecc-----cccCCCc
Confidence            999998862    11111 111112344567889999999 6677666 5778999987665443222     1334667


Q ss_pred             CEEEEEEeeCCCCEEEEEe-CCCcEEEEECCCCeeEEE------EecCCCcEEEEEEcCCCCEEEEEe-CCCeEEEEeCC
Q psy17682        217 RVGLVLWHPTAQNVLLTAG-SDNNVAIWNVGTGEIMIQ------IECHPDIVYSASWNWDGSKLLTTC-KDKKMRIINPR  288 (490)
Q Consensus       217 ~v~~~~~~p~~~~~l~s~~-~dg~v~iwd~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~  288 (490)
                      .+.++.++|++. .++.++ .+..+.+|+.........      ..........++|++++..++... ..+...+++..
T Consensus       129 ~~~~v~~s~d~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~  207 (333)
T d1ri6a_         129 GCHSANISPDNR-TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK  207 (333)
T ss_dssp             TBCCCEECTTSS-EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred             cceEEEeeecce-eeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeec
Confidence            788999999996 555554 556799999876542221      113455678999999998776655 55677888765


Q ss_pred             CCce----eeeeee-----cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEe-ccCCCceeeeeecC
Q psy17682        289 TGAI----EEEAVC-----HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVE-LDTSNGVMFPLYDP  358 (490)
Q Consensus       289 ~~~~----~~~~~~-----~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~-~~~~~~i~~~~~s~  358 (490)
                      ....    ......     ........++++++++++.....  ..+.+.+|++........... ......+..++|+|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~sp  285 (333)
T d1ri6a_         208 DPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDR--TASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDH  285 (333)
T ss_dssp             CTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEET--TTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECT
T ss_pred             ccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecc--cCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeC
Confidence            4321    111111     11123667889999987766553  467888998876555444332 23334578899999


Q ss_pred             CCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEE
Q psy17682        359 DTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGM  402 (490)
Q Consensus       359 ~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~  402 (490)
                      ||++|++++..++.|++|++......++.+..+..+.....+++
T Consensus       286 DGk~l~va~~~~~~v~v~~id~~tG~l~~~~~~~~g~~p~~v~~  329 (333)
T d1ri6a_         286 SGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVV  329 (333)
T ss_dssp             TSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEE
T ss_pred             CCCEEEEEECCCCeEEEEEEECCCCcEEEEEeccCCCCCcEEEE
Confidence            99999888888899999977654323344444544333334444

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.82  E-value=2.6e-18  Score=158.74  Aligned_cols=263  Identities=10%  Similarity=0.032  Sum_probs=177.8

Q ss_pred             eeeeeccCCCCCcEEec--ccccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecc
Q psy17682         24 RLTYFSPRTLTEPVVDL--LYHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKV  101 (490)
Q Consensus        24 ~~~~~~~~~~~~~~~~l--~gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (490)
                      ++..||.++.. .+..+  ..+...+.+++|+|+|..++++++.++.|.+||+.+++..                  ...
T Consensus        12 ~v~v~D~~s~~-~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~------------------~~~   72 (337)
T d1pbyb_          12 KLVVIDTEKMA-VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETL------------------GRI   72 (337)
T ss_dssp             EEEEEETTTTE-EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEE------------------EEE
T ss_pred             EEEEEECCCCe-EEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEE------------------EEE
Confidence            45667776543 33334  3455678999999999555577888999999999986510                  000


Q ss_pred             cCCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEE
Q psy17682        102 GGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVI  181 (490)
Q Consensus       102 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l  181 (490)
                      ..                                         .              ....+...+..++|+|++ .++
T Consensus        73 ~~-----------------------------------------~--------------~~~~~~~~~~~v~~s~dg-~~l   96 (337)
T d1pbyb_          73 DL-----------------------------------------S--------------TPEERVKSLFGAALSPDG-KTL   96 (337)
T ss_dssp             EC-----------------------------------------C--------------BTTEEEECTTCEEECTTS-SEE
T ss_pred             ec-----------------------------------------C--------------CCcccccceeeEEEcCCC-cEE
Confidence            00                                         0              001122344567888877 566


Q ss_pred             EEEe------------CCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe
Q psy17682        182 ASGS------------EDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE  249 (490)
Q Consensus       182 ~s~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~  249 (490)
                      +++.            .++.+.+||..+++....+.        +...+.+++|+|+++ ++++++  +.+.+||..+++
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--------~~~~~~~~~~s~dg~-~l~~~~--~~~~~~d~~~~~  165 (337)
T d1pbyb_          97 AIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE--------APRQITMLAWARDGS-KLYGLG--RDLHVMDPEAGT  165 (337)
T ss_dssp             EEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE--------CCSSCCCEEECTTSS-CEEEES--SSEEEEETTTTE
T ss_pred             EEeecCCcceeeeccccccceeeccccCCeEEEecc--------ccCCceEEEEcCCCC-EEEEEc--CCcceeeeecCc
Confidence            5554            46788999998887655433        455678899999996 667765  457889999998


Q ss_pred             eEEEEecCCCcEEEEEEcCCC------------------------CEEEEEeCCCeEEEEeCCCCceeeeeeecCCCcee
Q psy17682        250 IMIQIECHPDIVYSASWNWDG------------------------SKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKAT  305 (490)
Q Consensus       250 ~~~~~~~~~~~v~~~~~~~~~------------------------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  305 (490)
                      ....+..+... ....+.|++                        ..+..+..++.+.+||..++........+......
T Consensus       166 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (337)
T d1pbyb_         166 LVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYF  244 (337)
T ss_dssp             EEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEE
T ss_pred             EEEEeecCCcc-ccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceE
Confidence            88777532211 111112211                        11122233456999999988866654444444588


Q ss_pred             EEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        306 RAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       306 ~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      .+.+++++.+++.+     ++.+++||+.+.+.   .....+...+.+++|+|||++| ++++.|+.|++||..+.+
T Consensus       245 ~~~~~~~~~~~~~~-----~~~i~v~d~~~~~~---~~~~~~~~~~~~~~~s~dG~~l-~v~~~~~~i~v~D~~t~~  312 (337)
T d1pbyb_         245 STAVNPAKTRAFGA-----YNVLESFDLEKNAS---IKRVPLPHSYYSVNVSTDGSTV-WLGGALGDLAAYDAETLE  312 (337)
T ss_dssp             EEEECTTSSEEEEE-----ESEEEEEETTTTEE---EEEEECSSCCCEEEECTTSCEE-EEESBSSEEEEEETTTCC
T ss_pred             EEEecccceEEEEc-----cccEEEEECCCCcE---EEEEcCCCCEEEEEECCCCCEE-EEEeCCCcEEEEECCCCc
Confidence            88999999988765     57899999998653   3333455678999999999999 567889999999999987

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.78  E-value=3.6e-16  Score=146.73  Aligned_cols=297  Identities=11%  Similarity=-0.029  Sum_probs=190.0

Q ss_pred             ccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe-----
Q psy17682        111 STANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS-----  185 (490)
Q Consensus       111 ~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~-----  185 (490)
                      ..+..++++|+...-+..........+.+.+|+..     +++   .+..+..+..+  .++|+||| .+|++++     
T Consensus        21 ~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~-----tg~---~~~~~~~~~~~--~~a~SpDG-~~l~va~~~~~~   89 (373)
T d2madh_          21 GPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAG-----SGS---ILGHVNGGFLP--NPVAAHSG-SEFALASTSFSR   89 (373)
T ss_pred             CCccccccCCCCCEEEEEcccccCCCceEEEEECC-----CCC---EEEEEeCCCCc--cEEEcCCC-CEEEEEeecCCc
Confidence            35778889999744333322333455678888864     333   33445555443  79999999 6776654     


Q ss_pred             -----CCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEE-eCCCcEEEEECCCCeeEEEEecCCC
Q psy17682        186 -----EDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTA-GSDNNVAIWNVGTGEIMIQIECHPD  259 (490)
Q Consensus       186 -----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~  259 (490)
                           .++.|.+||..+++....+..+......-......+.|+++++.+++.. ..++.+.+|+....+.....    .
T Consensus        90 ~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~----~  165 (373)
T d2madh_          90 IAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLL----S  165 (373)
T ss_pred             ccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEe----c
Confidence                 4678999999999877665432111111112235688999986433332 34578899998877655443    3


Q ss_pred             cEEEEEEcCCCCE-EEEEeCCCeEEEEeCCCCceeeeeeecC-----CCceeEEEEeCCCcEEEEEeCCCceeEEEEecC
Q psy17682        260 IVYSASWNWDGSK-LLTTCKDKKMRIINPRTGAIEEEAVCHE-----GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAP  333 (490)
Q Consensus       260 ~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~  333 (490)
                      ...++.++|+++. +++.+.|+++.+||...++.......+.     ........+++++.+++.+    .++.+.+|+.
T Consensus       166 ~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~  241 (373)
T d2madh_         166 SPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV----YSGKILQADI  241 (373)
T ss_pred             cceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEec----CCceEEEEEc
Confidence            4568899999864 5678899999999999887766554221     1123445566777676665    3778888887


Q ss_pred             CCCCCCeEEEe----------ccCCCceeeeeecCCCCeEE---------EEecCCCeEEEEEecCCCCeeEEeeeeeCC
Q psy17682        334 DHLDEPIVMVE----------LDTSNGVMFPLYDPDTNLVY---------LCGKGDSVIRYFEITAEPPFVHYINTFQTP  394 (490)
Q Consensus       334 ~~~~~~~~~~~----------~~~~~~i~~~~~s~~~~~l~---------~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~  394 (490)
                      ...........          .........+++++++..++         +....++.+.+||..+++    .+..+..+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~----~~~~~~~~  317 (373)
T d2madh_         242 SAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ----TSSQISLG  317 (373)
T ss_pred             CCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCc----EEEEecCC
Confidence            76432111110          00112234456667666553         344566789999999987    34445566


Q ss_pred             CceeeEEEeeCcee--EEee--cceeEEEEecCCCceEEE
Q psy17682        395 DPQRGIGMMPKRGC--DVNS--CEIGRFFRLNNSGLCQVV  430 (490)
Q Consensus       395 ~~i~~~~~sp~~~~--l~~~--~~~~~~~~~~~~~~~~~i  430 (490)
                      ..+.+++|+|||+.  ++++  ++.+++|++.+++.+..+
T Consensus       318 ~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~  357 (373)
T d2madh_         318 HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST  357 (373)
T ss_pred             CCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEE
Confidence            78999999999973  3444  458899999999855444

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.78  E-value=1.6e-15  Score=142.18  Aligned_cols=312  Identities=12%  Similarity=0.003  Sum_probs=197.4

Q ss_pred             cccccceeeeEEeccCCCceEEee----eCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCe
Q psy17682         40 LLYHQRRVGLVLWHPTAQNVLLTA----GKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANE  115 (490)
Q Consensus        40 l~gH~~~V~~v~~~p~~~~~l~s~----~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  115 (490)
                      ..+|..++.+++++|++..++++.    +.++.|.+||..+++..                  ..+..  +     ....
T Consensus        16 ~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~------------------~~~~~--~-----~~~~   70 (373)
T d2madh_          16 AGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSIL------------------GHVNG--G-----FLPN   70 (373)
T ss_pred             cccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEE------------------EEEeC--C-----CCcc
Confidence            456889999999999995555542    23467899998887621                  11111  0     1236


Q ss_pred             eEeccccccceEEEEE-------eeCCCceEEEECCCCCCCCcccCCCCcceeecccCCe-------eEEEECCCCCCEE
Q psy17682        116 ITISEDYVKEFKEEIR-------KLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPV-------LDIAWSPHDDNVI  181 (490)
Q Consensus       116 ~~~s~~~~~~~~~~~~-------~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V-------~~~~~~p~~~~~l  181 (490)
                      ++||||+.  +.....       .+..++.+.+|+..     .++   ....+..+....       ..+.|+|++...+
T Consensus        71 ~a~SpDG~--~l~va~~~~~~~~~~~~~~~v~v~D~~-----t~~---~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~  140 (373)
T d2madh_          71 PVAAHSGS--EFALASTSFSRIAKGKRTDYVEVFDPV-----TFL---PIADIELPDAPRFDVGPYSWMNANTPNNADLL  140 (373)
T ss_pred             EEEcCCCC--EEEEEeecCCcccccccceEEEEEECC-----CCc---EEEEEecCCcceeEeccCCCcEEEEeCCCcEE
Confidence            89999963  222211       22456889999985     222   223333343333       4567888774332


Q ss_pred             E-EEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecC---
Q psy17682        182 A-SGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECH---  257 (490)
Q Consensus       182 ~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~---  257 (490)
                      + ....++.+.+|+....+...           +.....++.++|+++..+++.+.|+.+.+|+...++.......+   
T Consensus       141 v~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~  209 (373)
T d2madh_         141 FFQFAAGPAVGLVVQGGSSDDQ-----------LLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLT  209 (373)
T ss_pred             EEEEcCCCceEEeeccCCeEEE-----------EeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccc
Confidence            2 22445678888876654432           44456789999999878889999999999999988776655422   


Q ss_pred             ---CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee--ecC---------CCceeEEEEeCCCcEEEEEeCC-
Q psy17682        258 ---PDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV--CHE---------GSKATRAIYLKSGLIFTTGFSK-  322 (490)
Q Consensus       258 ---~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~---------~~~~~~~~~s~~~~~l~~~~~~-  322 (490)
                         ......+.+.+++. ++..+.++.+++|+...........  .+.         ......+++++++..++..... 
T Consensus       210 ~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  288 (373)
T d2madh_         210 AAQNLLTQPAQANKSGR-IVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQ  288 (373)
T ss_pred             cCccceeeeEEECCCce-EEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCC
Confidence               12234455665554 4555678999999988765332221  111         1113455677776655433211 


Q ss_pred             ------CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCe-EEEEecCCCeEEEEEecCCCCeeEEeeeee-CC
Q psy17682        323 ------MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNL-VYLCGKGDSVIRYFEITAEPPFVHYINTFQ-TP  394 (490)
Q Consensus       323 ------~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~-~~  394 (490)
                            ...+.+.+||..+++.   ...+.+...+..++|+|||+. |+++++.|+.|++||+.+++    .+..+. .+
T Consensus       289 ~~~~~~~~~~~v~~~d~~t~~~---~~~~~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~----~~~~~~~~g  361 (373)
T d2madh_         289 SAWKLHAAAKEVTSVTGLVGQT---SSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD----QDQSTVELG  361 (373)
T ss_pred             ceEEeecCCCeEEEEECCCCcE---EEEecCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCC----EEEEECCCC
Confidence                  1356789999988763   333455667899999999986 45788999999999999998    334443 33


Q ss_pred             CceeeEEEeeC
Q psy17682        395 DPQRGIGMMPK  405 (490)
Q Consensus       395 ~~i~~~~~sp~  405 (490)
                      ...+.+++.++
T Consensus       362 ~~P~~l~~~~~  372 (373)
T d2madh_         362 SGPQVLSVMNE  372 (373)
T ss_pred             CCCcEEEEecC
Confidence            45566665543

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.77  E-value=6.7e-17  Score=149.67  Aligned_cols=298  Identities=8%  Similarity=-0.024  Sum_probs=188.2

Q ss_pred             eeeeeccCCCCCcEEecc-cccceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeeccc
Q psy17682         24 RLTYFSPRTLTEPVVDLL-YHQRRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVG  102 (490)
Q Consensus        24 ~~~~~~~~~~~~~~~~l~-gH~~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (490)
                      .+..||..+. +.+.++. .|...+.+++|+|++..++++++.++.|.+||+.+++..                 .....
T Consensus        19 ~v~v~D~~t~-~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~-----------------~~~~~   80 (346)
T d1jmxb_          19 NLHVVDVASD-TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT-----------------FHANL   80 (346)
T ss_dssp             EEEEEETTTT-EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE-----------------EEEES
T ss_pred             EEEEEECCCC-CEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeee-----------------eeecc
Confidence            4677888654 4455554 677889999999999666688888999999999986511                 11111


Q ss_pred             CCCCCcccccCCeeEeccccccceEEEE-------EeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECC
Q psy17682        103 GKGGANRNSTANEITISEDYVKEFKEEI-------RKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSP  175 (490)
Q Consensus       103 ~~~~~~~~~~v~~~~~s~~~~~~~~~~~-------~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p  175 (490)
                      .............++++|++...+....       .....++.+.+|+..     .++....+... .....+..+.+++
T Consensus        81 ~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~  154 (346)
T d1jmxb_          81 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA-----DGLEAKPVRTF-PMPRQVYLMRAAD  154 (346)
T ss_dssp             CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGG-----GGGGBCCSEEE-ECCSSCCCEEECT
T ss_pred             cccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecc-----cceeeeEEEee-eccCceEEEEecC
Confidence            1111122334677899998632221111       112346667777663     22222222221 2234566677777


Q ss_pred             CCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe
Q psy17682        176 HDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE  255 (490)
Q Consensus       176 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~  255 (490)
                      ++ .++++ +  +.+.+|++.+++....+.        .......+.++|++..+++.+..++.+.+++..         
T Consensus       155 ~~-~~~~~-~--~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  213 (346)
T d1jmxb_         155 DG-SLYVA-G--PDIYKMDVKTGKYTVALP--------LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTI---------  213 (346)
T ss_dssp             TS-CEEEE-S--SSEEEECTTTCCEEEEEC--------STTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEE---------
T ss_pred             CC-EEEEe-C--CcceEEEccCCCEEEEEe--------cCCCccceEEeccccEEEEEecCCCceEeeeee---------
Confidence            66 55543 2  468999998887765543        233456667788876444555555555555421         


Q ss_pred             cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCC
Q psy17682        256 CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDH  335 (490)
Q Consensus       256 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~  335 (490)
                              ..+.+....++++..+..+.+||+.++.............+..+.+++++..++...    .+.+.+||..+
T Consensus       214 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~v~d~~~  281 (346)
T d1jmxb_         214 --------ARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV----LNRLAKYDLKQ  281 (346)
T ss_dssp             --------EEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE----ESEEEEEETTT
T ss_pred             --------eeeccCceeEeeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEec----CCeEEEEECCC
Confidence                    112223444566666788999999998876655433333488888999888777775    66899999987


Q ss_pred             CCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        336 LDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       336 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      ++.   .........+.+++|+|||++| ++++.|+.|++||+.+.+
T Consensus       282 ~~~---~~~~~~~~~~~~va~s~DG~~l-~v~~~d~~v~v~D~~t~~  324 (346)
T d1jmxb_         282 RKL---IKAANLDHTYYCVAFDKKGDKL-YLGGTFNDLAVFNPDTLE  324 (346)
T ss_dssp             TEE---EEEEECSSCCCEEEECSSSSCE-EEESBSSEEEEEETTTTE
T ss_pred             CcE---EEEEcCCCCEEEEEEcCCCCEE-EEEeCCCcEEEEECccCC
Confidence            653   3333445578999999999999 567789999999999987

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.75  E-value=2.7e-16  Score=146.39  Aligned_cols=296  Identities=11%  Similarity=0.060  Sum_probs=176.3

Q ss_pred             eeeeEEeccCCCceEEee----eCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccc
Q psy17682         46 RVGLVLWHPTAQNVLLTA----GKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISED  121 (490)
Q Consensus        46 ~V~~v~~~p~~~~~l~s~----~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~  121 (490)
                      ++.-.+.+|++..++++.    +.++.|.+||..+++..                  ..+.       ......++||||
T Consensus         3 p~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~------------------~~~~-------~g~~~~~a~SpD   57 (355)
T d2bbkh_           3 PRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVI------------------GMID-------GGFLPNPVVADD   57 (355)
T ss_dssp             CCBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEE------------------EEEE-------ECSSCEEEECTT
T ss_pred             CcEeEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEE------------------EEEE-------CCCCCceEEcCC
Confidence            344446689995555543    34568999999887521                  1110       012346899999


Q ss_pred             cccceEEEEE-------eeCCCceEEEECCCCCCCCcccCCCCcceee----cccCCeeEEEECCCCCCEEEEE--eCCC
Q psy17682        122 YVKEFKEEIR-------KLKSQQALSILPPPSTAPNTGRINADHALVG----GHKGPVLDIAWSPHDDNVIASG--SEDC  188 (490)
Q Consensus       122 ~~~~~~~~~~-------~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~----~h~~~V~~~~~~p~~~~~l~s~--~~dg  188 (490)
                      +.  ++.+..       .+..++.|.+|+..     .++....+..-.    ........++|+|++ .+++.+  +.+.
T Consensus        58 g~--~l~v~~~~~~~~~~g~~d~~v~v~D~~-----t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~~~v~~~~~~~  129 (355)
T d2bbkh_          58 GS--FIAHASTVFSRIARGERTDYVEVFDPV-----TLLPTADIELPDAPRFLVGTYPWMTSLTPDG-KTLLFYQFSPAP  129 (355)
T ss_dssp             SS--CEEEEEEEEEETTEEEEEEEEEEECTT-----TCCEEEEEEETTCCCCCBSCCGGGEEECTTS-SEEEEEECSSSC
T ss_pred             CC--EEEEEeCCCccccccCCCCEEEEEECC-----CCCEEEEEecCCcceeecCCCCceEEEecCC-CeeEEecCCCCc
Confidence            63  222221       23457899999985     222111111111    112334568999998 566555  4567


Q ss_pred             cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcC
Q psy17682        189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNW  268 (490)
Q Consensus       189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~  268 (490)
                      .+.+|+..+++....+..+......-......+.+++++..+++....++.+.+++....+.     .+...+....+.+
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~  204 (355)
T d2bbkh_         130 AVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHP-----EDEFLINHPAYSQ  204 (355)
T ss_dssp             EEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSC-----TTSCBCSCCEEET
T ss_pred             eeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccc-----eecceeeeccccC
Confidence            89999999887766544321111111122233445555542223333334444444333221     2333455667888


Q ss_pred             CCCEEEEEeCCCeEEEEeCCCCceeee--eeecC---------CCceeEEEEeCCCcEEEEEeCC-------CceeEEEE
Q psy17682        269 DGSKLLTTCKDKKMRIINPRTGAIEEE--AVCHE---------GSKATRAIYLKSGLIFTTGFSK-------MSERQYSL  330 (490)
Q Consensus       269 ~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~~~---------~~~~~~~~~s~~~~~l~~~~~~-------~~~~~i~i  330 (490)
                      ++..++.++.++.+++|++..++....  ...+.         ......+++++++..++.....       .....|.+
T Consensus       205 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v  284 (355)
T d2bbkh_         205 KAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV  284 (355)
T ss_dssp             TTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred             CCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEE
Confidence            888999999999999999988754221  11111         0113458899998877765421       12468999


Q ss_pred             ecCCCCCCCeEEEeccCCCceeeeeecCCCCe-EEEEecCCCeEEEEEecCCC
Q psy17682        331 RAPDHLDEPIVMVELDTSNGVMFPLYDPDTNL-VYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       331 wd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~g~~dg~i~iwd~~~~~  382 (490)
                      ||..+.+..   ..+.....+.+++|+|||+. ++++++.|+.|++||+.+++
T Consensus       285 ~d~~t~~~~---~~~~~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~  334 (355)
T d2bbkh_         285 LDAKTGERL---AKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE  334 (355)
T ss_dssp             EETTTCCEE---EEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred             EeCCCCcEE---EEecCCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCC
Confidence            999987632   22233456889999999984 66788889999999999998

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.71  E-value=2e-15  Score=140.36  Aligned_cols=289  Identities=10%  Similarity=0.007  Sum_probs=173.6

Q ss_pred             EeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEE----------eC
Q psy17682        117 TISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASG----------SE  186 (490)
Q Consensus       117 ~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~----------~~  186 (490)
                      +.+|+...-+..........+.+.+|+..     +++   .+.++..+  .+..++|+||| ++|+++          +.
T Consensus         8 a~spdg~~~~v~~~~~~~~~~~v~v~D~~-----tg~---~~~~~~~g--~~~~~a~SpDg-~~l~v~~~~~~~~~~g~~   76 (355)
T d2bbkh_           8 APAPDARRVYVNDPAHFAAVTQQFVIDGE-----AGR---VIGMIDGG--FLPNPVVADDG-SFIAHASTVFSRIARGER   76 (355)
T ss_dssp             CCCCCTTEEEEEECGGGCSSEEEEEEETT-----TTE---EEEEEEEC--SSCEEEECTTS-SCEEEEEEEEEETTEEEE
T ss_pred             eeCCCCCEEEEEecccCCCcCeEEEEECC-----CCc---EEEEEECC--CCCceEEcCCC-CEEEEEeCCCccccccCC
Confidence            45666533322222223456789999884     333   23344444  34479999999 555443          45


Q ss_pred             CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe--CCCcEEEEECCCCeeEEEEecCCCc----
Q psy17682        187 DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG--SDNNVAIWNVGTGEIMIQIECHPDI----  260 (490)
Q Consensus       187 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~----  260 (490)
                      |+.|++||+.+++....+..+.............++|+|++. .++.+.  .+..+.+|+..+++.+..+..+...    
T Consensus        77 d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (355)
T d2bbkh_          77 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGK-TLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFP  155 (355)
T ss_dssp             EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEE
T ss_pred             CCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCC-eeEEecCCCCceeeeeecCCCcEeeEEecCCcceEee
Confidence            789999999999877655432221122233445689999996 555553  4578999999999988887643321    


Q ss_pred             ---EEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC
Q psy17682        261 ---VYSASWNWDGSKLLTTC-KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL  336 (490)
Q Consensus       261 ---v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~  336 (490)
                         ...+.++++++.++... .++.+.+++.......     + ...+....+.+++..++.++   .++.+++|++...
T Consensus       156 ~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~  226 (355)
T d2bbkh_         156 TAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPE-----D-EFLINHPAYSQKAGRLVWPT---YTGKIHQIDLSSG  226 (355)
T ss_dssp             EETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCT-----T-SCBCSCCEEETTTTEEEEEB---TTSEEEEEECTTS
T ss_pred             cCCcceEEEcCCCCEEEEEecCCCeEEEEecccccce-----e-cceeeeccccCCCCeEEEec---CCCeEEEEecCCC
Confidence               12234444444333322 2233333333322211     1 11244556777777777776   5889999999875


Q ss_pred             CCCeEEEeccC----------CCceeeeeecCCCCeEEEEecC---------CCeEEEEEecCCCCeeEEeeeeeCCCce
Q psy17682        337 DEPIVMVELDT----------SNGVMFPLYDPDTNLVYLCGKG---------DSVIRYFEITAEPPFVHYINTFQTPDPQ  397 (490)
Q Consensus       337 ~~~~~~~~~~~----------~~~i~~~~~s~~~~~l~~~g~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~i  397 (490)
                      ..........+          ..+...+++++++..+++....         ...|.+||..+++    .+..+..+..+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~----~~~~~~~~~~~  302 (355)
T d2bbkh_         227 DAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE----RLAKFEMGHEI  302 (355)
T ss_dssp             SCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC----EEEEEEEEEEE
T ss_pred             cEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCc----EEEEecCCCCE
Confidence            43211110000          1234568899999998665432         2479999999987    33333444568


Q ss_pred             eeEEEeeCce--eEEee--cceeEEEEecCCCceEEE
Q psy17682        398 RGIGMMPKRG--CDVNS--CEIGRFFRLNNSGLCQVV  430 (490)
Q Consensus       398 ~~~~~sp~~~--~l~~~--~~~~~~~~~~~~~~~~~i  430 (490)
                      .+++|+|||+  +++++  ++.+++|++.+++.+..+
T Consensus       303 ~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i  339 (355)
T d2bbkh_         303 DSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSV  339 (355)
T ss_dssp             CEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             EEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEE
Confidence            9999999996  34444  458899999998854443

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.58  E-value=2.6e-14  Score=133.73  Aligned_cols=272  Identities=9%  Similarity=-0.070  Sum_probs=164.4

Q ss_pred             CCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEe----------CCCcEEEEECCCCCccccc
Q psy17682        135 SQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGS----------EDCVVKVWQIPDGGISRTL  204 (490)
Q Consensus       135 ~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~  204 (490)
                      +...+.+++..     .++   .+.++.++..+  .++|+|+| ..+++.+          .|+.|++||..+++.+..+
T Consensus        44 g~~~~~~~d~~-----~~~---~~~~~~~~~~~--~~a~spDg-~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i  112 (368)
T d1mdah_          44 GTTENWVSCAG-----CGV---TLGHSLGAFLS--LAVAGHSG-SDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADI  112 (368)
T ss_dssp             SSEEEEEEETT-----TTE---EEEEEEECTTC--EEEECTTS-SCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEE
T ss_pred             CcceEEEEeCC-----CCc---EEEEEeCCCCC--cceECCCC-CEEEEEcccCccccccccCCeEEEEECCCCcEeeee
Confidence            34445566653     222   33445555544  58999999 5565543          4678999999999877665


Q ss_pred             ccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Q psy17682        205 TEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRI  284 (490)
Q Consensus       205 ~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  284 (490)
                      ..|.............++|+|+|+.++++...++.+.+||+.+++.+..+..+.....   +......++..+.||++.+
T Consensus       113 ~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~Dg~~~~  189 (368)
T d1mdah_         113 ELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI---HPGAAATHYLGSCPASLAA  189 (368)
T ss_dssp             EETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCC---EEEETTEEECCCCTTSCEE
T ss_pred             cCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceE---ccCCCceEEEEcCCCCEEE
Confidence            4321111112223346899999985555555679999999999998888775443211   1112346666777888888


Q ss_pred             EeCCCCceeeeeee-----cCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc-----------CC
Q psy17682        285 INPRTGAIEEEAVC-----HEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD-----------TS  348 (490)
Q Consensus       285 wd~~~~~~~~~~~~-----~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~-----------~~  348 (490)
                      +++...........     ..........+.+++..+...     .+.+.+++....... ......           ..
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  263 (368)
T d1mdah_         190 SDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV-----ASSILQGDIPAAGAT-MKAAIDGNESGRKADNFRS  263 (368)
T ss_dssp             EECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB-----SSCCEEEECCSSCCE-EECCCCSSCTHHHHTTEEE
T ss_pred             EEecCCceeeeeeecccccccccceeecccccCcEEEEec-----CCCEEEEeecCCceE-EEeecccccceeeeeeecC
Confidence            88765543322211     111124556777787776654     334555555443221 111100           01


Q ss_pred             CceeeeeecCCCCeEEEEecCC--------CeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce-eE-Eee--ccee
Q psy17682        349 NGVMFPLYDPDTNLVYLCGKGD--------SVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG-CD-VNS--CEIG  416 (490)
Q Consensus       349 ~~i~~~~~s~~~~~l~~~g~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l-~~~--~~~~  416 (490)
                      .+...+++++++..+++....+        ..|.+||..+++    .+..+..+..+.+++|+|||+ ++ +++  ++.+
T Consensus       264 ~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~----~~~~~~~~~~~~~~a~spDG~~~ly~s~~~~~~v  339 (368)
T d1mdah_         264 AGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ----TSGPISNGHDSDAIIAAQDGASDNYANSAGTEVL  339 (368)
T ss_dssp             CSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC----EEECCEEEEEECEEEECCSSSCEEEEEETTTTEE
T ss_pred             CCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCc----EeEEecCCCceeEEEECCCCCEEEEEEeCCCCeE
Confidence            2234578899999886654322        368999999987    333334445789999999986 33 443  4578


Q ss_pred             EEEEecCCCceEEE
Q psy17682        417 RFFRLNNSGLCQVV  430 (490)
Q Consensus       417 ~~~~~~~~~~~~~i  430 (490)
                      ++|+..+++.+..+
T Consensus       340 ~v~D~~tgk~~~~i  353 (368)
T d1mdah_         340 DIYDAASDQDQSSV  353 (368)
T ss_dssp             EEEESSSCEEEEEC
T ss_pred             EEEECCCCCEEEEE
Confidence            99999988744433

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.56  E-value=6.5e-14  Score=130.58  Aligned_cols=240  Identities=10%  Similarity=0.020  Sum_probs=162.0

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcE--
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNV--  240 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v--  240 (490)
                      .|........++|||+.++++...+++|.++|+++++....+..|      +...+..++|+|+++...+++..+..+  
T Consensus        69 ~hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP------~g~gphgi~~spdg~t~YV~~~~~~~v~~  142 (441)
T d1qnia2          69 CHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIP------NVQAIHGLRLQKVPKTNYVFCNAEFVIPQ  142 (441)
T ss_dssp             BCCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECT------TCCCEEEEEECCSSBCCEEEEEECSCEES
T ss_pred             ccCCCcceecccCCCCEEEEEcCCCCEEEEEECCCCcEeeEEecC------CCCCccceEEeccCCEEEEEeccCCcccc
Confidence            455566677778999444466667889999999998876654322      567899999999986544444333333  


Q ss_pred             ----------------EEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC-------------------------
Q psy17682        241 ----------------AIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD-------------------------  279 (490)
Q Consensus       241 ----------------~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------------------  279 (490)
                                      ..+|..+.+...++.. ......++++|+|+++++.+.+                         
T Consensus       143 ~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v-~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~  221 (441)
T d1qnia2         143 PNDGTDFSLDNSYTMFTAIDAETMDVAWQVIV-DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVER  221 (441)
T ss_dssp             SCSSSCCCGGGEEEEEEEEETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHH
T ss_pred             cCcccccccccccceEEeecCccceeeEEEec-CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccc
Confidence                            4588888887777764 3457789999999988887643                         


Q ss_pred             ----------------CeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC-----
Q psy17682        280 ----------------KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE-----  338 (490)
Q Consensus       280 ----------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~-----  338 (490)
                                      +.+.+++....+.+..+.....  ...+.++|||+++++++.  .++++.+||+.+..+     
T Consensus       222 ~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgks--PhGv~vSPDGkyl~~~~~--~~~tvsv~d~~k~~~~~~~~  297 (441)
T d1qnia2         222 IAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKN--PHGLNTSPDGKYFIANGK--LSPTVSVIAIDKLDDLFEDK  297 (441)
T ss_dssp             HHHHHHTTCCBCCTTCCCCEEECSSSCSSEEEECCBSS--CCCEEECTTSCEEEEECT--TSSBEEEEEGGGHHHHTTTS
T ss_pred             eEEEecCCCEEEeCCCCcEEEEcccCCceEEEEeCCCC--ccCceECCCCCEEEEeCC--cCCcEEEEEeehhhhHhhcc
Confidence                            2344444444455555554333  678999999998876653  688999999865321     


Q ss_pred             ----CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecC---------CCCeeEEeee---eeCCCceeeEEE
Q psy17682        339 ----PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITA---------EPPFVHYINT---FQTPDPQRGIGM  402 (490)
Q Consensus       339 ----~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~---------~~~~~~~~~~---~~~~~~i~~~~~  402 (490)
                          .....+....-+.....|+++|+.+ .+...|..|..|++..         ..++...+..   ..|...+.+.++
T Consensus       298 ~~~~~~~~~~~~~glgplh~~fd~~g~~y-ts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~  376 (441)
T d1qnia2         298 IELRDTIVAEPELGLGPLHTTFDGRGNAY-TTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESR  376 (441)
T ss_dssp             SCGGGGEEECCBCCSCEEEEEECSSSEEE-EEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTST
T ss_pred             CCcceEEEeecccccCcccceecCCceEE-EcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCcccccccc
Confidence                1111222223345667899999654 8889999999999852         1223332221   233345677889


Q ss_pred             eeCceeEEeecc
Q psy17682        403 MPKRGCDVNSCE  414 (490)
Q Consensus       403 sp~~~~l~~~~~  414 (490)
                      +|||++|++++.
T Consensus       377 ~pdGk~l~s~~k  388 (441)
T d1qnia2         377 DADGKWLVVLSK  388 (441)
T ss_dssp             TCCCCEEEEEES
T ss_pred             CCCCcEEEecCc
Confidence            999999999854

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.51  E-value=2.1e-13  Score=127.47  Aligned_cols=214  Identities=9%  Similarity=-0.004  Sum_probs=131.2

Q ss_pred             eEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC
Q psy17682        169 LDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG  248 (490)
Q Consensus       169 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~  248 (490)
                      ..++|+|||+.++++...++.+.+||+.+++....+..       +...    .+.|.++..++..+.||.+.++++...
T Consensus       127 ~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~-------~~~~----~~~~~~~~~~v~~~~Dg~~~~~~~~~~  195 (368)
T d1mdah_         127 HIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKS-------ASCF----HIHPGAAATHYLGSCPASLAASDLAAA  195 (368)
T ss_dssp             TSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEEC-------SSCC----CCEEEETTEEECCCCTTSCEEEECCSS
T ss_pred             cceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeec-------cCcc----eEccCCCceEEEEcCCCCEEEEEecCC
Confidence            35899999944444445679999999999877665432       2111    123344456777778888888887654


Q ss_pred             eeEEEE------ecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee--ecC---------CCceeEEEEeC
Q psy17682        249 EIMIQI------ECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV--CHE---------GSKATRAIYLK  311 (490)
Q Consensus       249 ~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~---------~~~~~~~~~s~  311 (490)
                      ......      ..+...+....+.+++..+.+  .++.+++++...+.......  .+.         ......+++++
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~  273 (368)
T d1mdah_         196 PAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWA--VASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLK  273 (368)
T ss_dssp             CCCCEECCCCSCTTSCBCSCCEEETTTTEEEEC--BSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEET
T ss_pred             ceeeeeeecccccccccceeecccccCcEEEEe--cCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcC
Confidence            432221      123344456777777765544  34666777766554332111  000         00134578899


Q ss_pred             CCcEEEEEeCC------CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCC-eEEEEecCCCeEEEEEecCCCCe
Q psy17682        312 SGLIFTTGFSK------MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTN-LVYLCGKGDSVIRYFEITAEPPF  384 (490)
Q Consensus       312 ~~~~l~~~~~~------~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~g~~dg~i~iwd~~~~~~~  384 (490)
                      ++..+......      .....+.+||..+++.   .........+..++|+|||+ +||+++..|+.|++||..+++  
T Consensus       274 ~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~---~~~~~~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk--  348 (368)
T d1mdah_         274 NTDGIMILTVEHSRSCLAAAENTSSVTASVGQT---SGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ--  348 (368)
T ss_dssp             TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE---EECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE--
T ss_pred             CCCEEEEEecCCCceeecCCceEEEEECCCCcE---eEEecCCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCC--
Confidence            97766554311      1235799999998753   33333445688899999997 577888889999999999997  


Q ss_pred             eEEeeeeeCCCceeeEEE
Q psy17682        385 VHYINTFQTPDPQRGIGM  402 (490)
Q Consensus       385 ~~~~~~~~~~~~i~~~~~  402 (490)
                        .+..+..+..-..|++
T Consensus       349 --~~~~i~~g~~P~~l~~  364 (368)
T d1mdah_         349 --DQSSVELDKGPESLSV  364 (368)
T ss_dssp             --EEEECCCCSCCCEEEC
T ss_pred             --EEEEEECCCCCCEEEE
Confidence              3333443333444443

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.46  E-value=1.6e-11  Score=118.43  Aligned_cols=339  Identities=11%  Similarity=0.046  Sum_probs=182.0

Q ss_pred             eEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEE
Q psy17682         49 LVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKE  128 (490)
Q Consensus        49 ~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~  128 (490)
                      .+.|.+++ .++.  -.|+.+.+||..+++..                .+  +....-......+.++.||||.  +++.
T Consensus        21 ~~~W~~d~-~~~~--~~~~~~~~~~~~t~~~~----------------~~--~~~~~~~~~~~~i~~~~~SpDg--~~i~   77 (470)
T d2bgra1          21 SLRWISDH-EYLY--KQENNILVFNAEYGNSS----------------VF--LENSTFDEFGHSINDYSISPDG--QFIL   77 (470)
T ss_dssp             CCEECSSS-EEEE--ESSSCEEEEETTTCCEE----------------EE--ECTTTTTTSSSCCCEEEECTTS--SEEE
T ss_pred             CCEeCCCC-EEEE--EcCCcEEEEECCCCCEE----------------EE--EchhhhhhccCccceeEECCCC--CEEE
Confidence            46799888 6665  35788999999987621                01  1111111223458899999996  3333


Q ss_pred             EEEe------eCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccc
Q psy17682        129 EIRK------LKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISR  202 (490)
Q Consensus       129 ~~~~------~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~  202 (490)
                      ....      .+..+.+.+|++.     .++    ...+..|.+.+..+.|+||| ..+|... ++.+.+|+..+++..+
T Consensus        78 ~~~~~~~~~r~s~~~~~~l~d~~-----~~~----~~~l~~~~~~~~~~~~SPDG-~~ia~~~-~~~l~~~~~~~g~~~~  146 (470)
T d2bgra1          78 LEYNYVKQWRHSYTASYDIYDLN-----KRQ----LITEERIPNNTQWVTWSPVG-HKLAYVW-NNDIYVKIEPNLPSYR  146 (470)
T ss_dssp             EEEEEEECSSSCEEEEEEEEETT-----TTE----ECCSSCCCTTEEEEEECSST-TCEEEEE-TTEEEEESSTTSCCEE
T ss_pred             EEECCcceeeeccCceEEEEECC-----CCc----ccccccCCccccccccccCc-ceeeEee-cccceEEECCCCceee
Confidence            2211      1345788899985     222    33466788999999999999 6677654 6789999998887654


Q ss_pred             ccccce--eeec---------ccccCEEEEEEeeCCCCEEEEEeCCCc-EEEEEC-------------------------
Q psy17682        203 TLTEPV--VDLL---------YHQRRVGLVLWHPTAQNVLLTAGSDNN-VAIWNV-------------------------  245 (490)
Q Consensus       203 ~~~~~~--~~~~---------~~~~~v~~~~~~p~~~~~l~s~~~dg~-v~iwd~-------------------------  245 (490)
                      ......  ..+.         ...+....+.|+|+|+ .|+....|.. +..|.+                         
T Consensus       147 ~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk-~ia~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  225 (470)
T d2bgra1         147 ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGT-FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVN  225 (470)
T ss_dssp             CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSS-EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCC
T ss_pred             eeeccCCCcccccccceeeeeeecCCccccEECCCCC-ccceeEecCCcCceEEEEeeccCCCCCCeeeeeccccccccC
Confidence            322100  0000         1223456688999997 6776654422 433322                         


Q ss_pred             ----------CCCeeEEEE-----------ecCCCcEEEEEEcCCCCEEEEEe-CCC-----eEEEEeCCCCceeeeee-
Q psy17682        246 ----------GTGEIMIQI-----------ECHPDIVYSASWNWDGSKLLTTC-KDK-----KMRIINPRTGAIEEEAV-  297 (490)
Q Consensus       246 ----------~~~~~~~~~-----------~~~~~~v~~~~~~~~~~~l~~~~-~dg-----~i~iwd~~~~~~~~~~~-  297 (490)
                                ..++.....           ......+..+.|.+++..++... ..+     .+..+|..++....... 
T Consensus       226 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d~~tg~~~~~~~~  305 (470)
T d2bgra1         226 PTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVAR  305 (470)
T ss_dssp             CEEEEEEEEGGGCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGG
T ss_pred             CcceEEEEECCCcceeeeccccccCCccccCCCCceEEEEEEcCCCceeEEEeeccCCceEEEEEEecCCCCcEEEEEEE
Confidence                      111100000           00112356788888887555432 222     23444555554332211 


Q ss_pred             ----ecCCC-----ceeEEEEeCCC--cEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEE
Q psy17682        298 ----CHEGS-----KATRAIYLKSG--LIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLC  366 (490)
Q Consensus       298 ----~~~~~-----~~~~~~~s~~~--~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  366 (490)
                          .....     ......+.+++  .++..+..+ ....|.+|+...... .. . ..+...|..+ ++++++.++++
T Consensus       306 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~~d-g~~~ly~~~~~g~~~-~~-l-t~g~~~v~~~-~~~d~~~iyf~  380 (470)
T d2bgra1         306 QHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEE-GYRHICYFQIDKKDC-TF-I-TKGTWEVIGI-EALTSDYLYYI  380 (470)
T ss_dssp             CEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTT-SCEEEEEEETTCSCC-EE-S-CCSSSCEEEE-EEECSSEEEEE
T ss_pred             eeeeeeccceeecccCCCceeeecCCCcEEEEeccC-cCceeEEEeccCCce-ee-e-ccCCeeEEEE-EEECCCEEEEE
Confidence                00000     01223344443  334444422 345677777665432 11 1 1233445555 45566666666


Q ss_pred             ecCCC----eEEEEEec--CCCCeeEEeee--eeCCCceeeEEEeeCceeEEeecc-----eeEEEEecCCCceE
Q psy17682        367 GKGDS----VIRYFEIT--AEPPFVHYINT--FQTPDPQRGIGMMPKRGCDVNSCE-----IGRFFRLNNSGLCQ  428 (490)
Q Consensus       367 g~~dg----~i~iwd~~--~~~~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~-----~~~~~~~~~~~~~~  428 (490)
                      +..++    .-.||.+.  .+. ..+.+..  ..+...+.+++|||||++++..++     ..++|...+++.+.
T Consensus       381 a~~~~~~p~~~~ly~v~~~g~~-~~~~lt~~~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~~l~~~~~g~~v~  454 (470)
T d2bgra1         381 SNEYKGMPGGRNLYKIQLSDYT-KVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLR  454 (470)
T ss_dssp             ESCGGGCTTCBEEEEEETTCTT-CEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEE
T ss_pred             EecCCCCcceEEEEEEECCCCC-ceeEecccccCCCCCEEEEEECCCCCEEEEEecCCCCCeEEEEECCCCCEEE
Confidence            54433    22466554  333 2233321  123456889999999998774432     45788877776333

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.45  E-value=1.2e-11  Score=115.08  Aligned_cols=238  Identities=7%  Similarity=-0.040  Sum_probs=157.8

Q ss_pred             EEEEEeCCCcEEEEECCCCCcccccccc-----------------------eeeecccccCEEEEEEeeCCCCEEEEEeC
Q psy17682        180 VIASGSEDCVVKVWQIPDGGISRTLTEP-----------------------VVDLLYHQRRVGLVLWHPTAQNVLLTAGS  236 (490)
Q Consensus       180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----------------------~~~~~~~~~~v~~~~~~p~~~~~l~s~~~  236 (490)
                      .++|++.+|.|++|++.+++.++.+...                       ......|..........|||+.++++...
T Consensus        13 ~f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~   92 (441)
T d1qnia2          13 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKA   92 (441)
T ss_dssp             EEEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETT
T ss_pred             EEEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCC
Confidence            4778889999999999988877665320                       00011234445566678999755566677


Q ss_pred             CCcEEEEECCCCeeEEEEe-cCCCcEEEEEEcCCCC--EEEEEeCCC-----------------eEEEEeCCCCceeeee
Q psy17682        237 DNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWDGS--KLLTTCKDK-----------------KMRIINPRTGAIEEEA  296 (490)
Q Consensus       237 dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~--~l~~~~~dg-----------------~i~iwd~~~~~~~~~~  296 (490)
                      ++.|.++|+++++....+. .+...+..++|+|+|+  +++..+.+.                 .+..+|..+.+...++
T Consensus        93 ~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI  172 (441)
T d1qnia2          93 NTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQV  172 (441)
T ss_dssp             TTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEE
T ss_pred             CCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEE
Confidence            8999999999999877665 3577899999999998  444444332                 2456888888887777


Q ss_pred             eecCCCceeEEEEeCCCcEEEEEeCCCc--------------------------------------eeEEEEecCCCCCC
Q psy17682        297 VCHEGSKATRAIYLKSGLIFTTGFSKMS--------------------------------------ERQYSLRAPDHLDE  338 (490)
Q Consensus       297 ~~~~~~~~~~~~~s~~~~~l~~~~~~~~--------------------------------------~~~i~iwd~~~~~~  338 (490)
                      .....  +..+.++|+|+++.+.+....                                      ++.+.+++..... 
T Consensus       173 ~v~~~--p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~-  249 (441)
T d1qnia2         173 IVDGN--LDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESE-  249 (441)
T ss_dssp             EESSC--CCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCS-
T ss_pred             ecCCC--ccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCc-
Confidence            65443  788999999998887753211                                      1233333333221 


Q ss_pred             CeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe----eE----EeeeeeCCCceeeEEEeeCceeEE
Q psy17682        339 PIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF----VH----YINTFQTPDPQRGIGMMPKRGCDV  410 (490)
Q Consensus       339 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~----~~----~~~~~~~~~~i~~~~~sp~~~~l~  410 (490)
                        ....+........+.++|||+++++++..+++|.+||+...+..    ..    ........-.....+|.++|....
T Consensus       250 --v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yt  327 (441)
T d1qnia2         250 --FTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYT  327 (441)
T ss_dssp             --SEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEE
T ss_pred             --eEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEEE
Confidence              11222333446778999999999999999999999998752210    00    111111122345568999997666


Q ss_pred             ee--cceeEEEEec
Q psy17682        411 NS--CEIGRFFRLN  422 (490)
Q Consensus       411 ~~--~~~~~~~~~~  422 (490)
                      +.  ++.+..|++.
T Consensus       328 s~~~ds~v~kw~~~  341 (441)
T d1qnia2         328 TLFIDSQVCKWNIA  341 (441)
T ss_dssp             EETTTTEEEEEEHH
T ss_pred             cccccceEEEeccc
Confidence            54  5678889874

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.33  E-value=6.3e-10  Score=102.93  Aligned_cols=253  Identities=7%  Similarity=-0.036  Sum_probs=148.3

Q ss_pred             ccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEe--CCCcEE
Q psy17682        164 HKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAG--SDNNVA  241 (490)
Q Consensus       164 h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~--~dg~v~  241 (490)
                      ....+..|+|+|++ ++|+++.. +.+..|.+...........     .........+.++++++.++++..  ..+.|.
T Consensus        38 ~~~~~s~la~s~d~-~~ly~~~~-~~~~~~~i~~~~~~~~~~~-----~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~  110 (365)
T d1jofa_          38 QDEPISWMTFDHER-KNIYGAAM-KKWSSFAVKSPTEIVHEAS-----HPIGGHPRANDADTNTRAIFLLAAKQPPYAVY  110 (365)
T ss_dssp             TTCCCSEEEECTTS-SEEEEEEB-TEEEEEEEEETTEEEEEEE-----EECCSSGGGGCTTSCCEEEEEEECSSTTCCEE
T ss_pred             CCCCCCEEEEcCCC-CEEEEEeC-CcEEEEEEeCCCCeEEEee-----ecCCCCcEEEEECCCCCEEEEEEecCCCCEEE
Confidence            44567789999998 67776654 5688887754322211100     001223445666777653333322  134454


Q ss_pred             EEECCC-------------Ce---eEEEEe-cCCCcEEEEEEcCCCCEEEEEeC-CCeEEEEeCCCCceee---eee-ec
Q psy17682        242 IWNVGT-------------GE---IMIQIE-CHPDIVYSASWNWDGSKLLTTCK-DKKMRIINPRTGAIEE---EAV-CH  299 (490)
Q Consensus       242 iwd~~~-------------~~---~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~---~~~-~~  299 (490)
                      .+.+..             ++   ...... .....+.++.|+|+|+++++++. ...|.+|+......+.   ... ..
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~  190 (365)
T d1jofa_         111 ANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPD  190 (365)
T ss_dssp             EEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSS
T ss_pred             EeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecC
Confidence            443321             11   111111 12334789999999998888764 4578888765432221   111 12


Q ss_pred             CCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEE--ec---------------cCCCceeeeeecCCCCe
Q psy17682        300 EGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMV--EL---------------DTSNGVMFPLYDPDTNL  362 (490)
Q Consensus       300 ~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~--~~---------------~~~~~i~~~~~s~~~~~  362 (490)
                      .+.....++|+|+++++.+..+  .++.|.+|+...........  ..               ........+.++|||++
T Consensus       191 ~g~gPr~i~f~pdg~~~yv~~e--~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~  268 (365)
T d1jofa_         191 PGDHPRWVAMHPTGNYLYALME--AGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKY  268 (365)
T ss_dssp             TTCCEEEEEECTTSSEEEEEET--TTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSE
T ss_pred             CCCceEEEEECCCCceEEEecc--CCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCE
Confidence            2345899999999998876664  47889999987654322111  10               01112456889999999


Q ss_pred             EEEEecCCC-----eEEEEEecCCCCeeEEeeee---eCCCceeeEEEee-CceeEEee---cceeEEEEecCCC
Q psy17682        363 VYLCGKGDS-----VIRYFEITAEPPFVHYINTF---QTPDPQRGIGMMP-KRGCDVNS---CEIGRFFRLNNSG  425 (490)
Q Consensus       363 l~~~g~~dg-----~i~iwd~~~~~~~~~~~~~~---~~~~~i~~~~~sp-~~~~l~~~---~~~~~~~~~~~~~  425 (490)
                      ||++...+.     .|..|++.....+.......   ..+...++++++| +|++++.+   ++.+.+|+++...
T Consensus       269 lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~~  343 (365)
T d1jofa_         269 MFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF  343 (365)
T ss_dssp             EEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred             EEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCCc
Confidence            987754333     37788887654333222211   2334568899998 78876655   3488999988776

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.32  E-value=3.5e-10  Score=108.84  Aligned_cols=322  Identities=8%  Similarity=0.009  Sum_probs=161.2

Q ss_pred             eeeeccCCCCCcEE----ecccccceeeeEEeccCCCceEEeee---------CCCeEEEEeCCCCCCCCCCCcccccee
Q psy17682         25 LTYFSPRTLTEPVV----DLLYHQRRVGLVLWHPTAQNVLLTAG---------KEAEPILISLKDGYIPPSEKSKSALKV   91 (490)
Q Consensus        25 ~~~~~~~~~~~~~~----~l~gH~~~V~~v~~~p~~~~~l~s~~---------~D~~v~iWd~~~~~~~~~~~~~~~~~~   91 (490)
                      +..++..+......    .+.+|...|.++.|||++ +.|+.++         .++.+.|||+.++....          
T Consensus        38 ~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg-~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~----------  106 (470)
T d2bgra1          38 ILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDG-QFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT----------  106 (470)
T ss_dssp             EEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTEECC----------
T ss_pred             EEEEECCCCCEEEEEchhhhhhccCccceeEECCCC-CEEEEEECCcceeeeccCceEEEEECCCCcccc----------
Confidence            34455544333221    456677899999999999 6666553         35678899999865211          


Q ss_pred             ccccceeecccCCCCCcccccCCeeEeccccccceEEEEEeeCCCceEEEECCCCCCCCcccCCC-Ccceeec-------
Q psy17682         92 TKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEIRKLKSQQALSILPPPSTAPNTGRINA-DHALVGG-------  163 (490)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~-~~~~~~~-------  163 (490)
                               +..     ....+..+.|||++  +..+.    ..++.+.+++............. .-..+.+       
T Consensus       107 ---------l~~-----~~~~~~~~~~SPDG--~~ia~----~~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~  166 (470)
T d2bgra1         107 ---------EER-----IPNNTQWVTWSPVG--HKLAY----VWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYE  166 (470)
T ss_dssp             ---------SSC-----CCTTEEEEEECSST--TCEEE----EETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHH
T ss_pred             ---------ccc-----CCccccccccccCc--ceeeE----eecccceEEECCCCceeeeeeccCCCcccccccceeee
Confidence                     111     12246678999996  33332    34667888887532211000000 0001111       


Q ss_pred             --ccCCeeEEEECCCCCCEEEEEeCCCc-EEEEECC-----------------------------------CCCcccccc
Q psy17682        164 --HKGPVLDIAWSPHDDNVIASGSEDCV-VKVWQIP-----------------------------------DGGISRTLT  205 (490)
Q Consensus       164 --h~~~V~~~~~~p~~~~~l~s~~~dg~-i~iwd~~-----------------------------------~~~~~~~~~  205 (490)
                        +.+....+.|+||| ..|+....|.+ +..|.+.                                   .+.......
T Consensus       167 ~~~~~~~~~~~wSPDG-k~ia~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~  245 (470)
T d2bgra1         167 EEVFSAYSALWWSPNG-TFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNAT  245 (470)
T ss_dssp             HHTSSSSBCEEECTTS-SEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEEGGGCCSSSCCC
T ss_pred             eeecCCccccEECCCC-CccceeEecCCcCceEEEEeeccCCCCCCeeeeeccccccccCCcceEEEEECCCcceeeecc
Confidence              23445678899999 67777655433 4444321                                   111110000


Q ss_pred             cce----eeecccccCEEEEEEeeCCCCEEEE-EeCCC---c--EEEEECCCCeeEEEEe------cCCC-----cEEEE
Q psy17682        206 EPV----VDLLYHQRRVGLVLWHPTAQNVLLT-AGSDN---N--VAIWNVGTGEIMIQIE------CHPD-----IVYSA  264 (490)
Q Consensus       206 ~~~----~~~~~~~~~v~~~~~~p~~~~~l~s-~~~dg---~--v~iwd~~~~~~~~~~~------~~~~-----~v~~~  264 (490)
                      ...    .........+..+.|.+++. +++. ....+   .  +..+|..++.......      ....     .-...
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~w~~~~~-~~~~~~~r~~~~~~~~~~~~d~~tg~~~~~~~~~~~~~~~~~~i~~~~~~~~  324 (470)
T d2bgra1         246 SIQITAPASMLIGDHYLCDVTWATQER-ISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEP  324 (470)
T ss_dssp             EEEECCCHHHHTSCEEEEEEEEEETTE-EEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCC
T ss_pred             ccccCCccccCCCCceEEEEEEcCCCc-eeEEEeeccCCceEEEEEEecCCCCcEEEEEEEeeeeeeccceeecccCCCc
Confidence            000    00011223456788988875 4443 22222   2  3334555554332211      0000     01123


Q ss_pred             EEcCCC--CEEEEEeCCCe--EEEEeCCCCceeeeeeecCCCceeEEEEeCCC-cEEEEEeCCC---ceeEEEEecCCCC
Q psy17682        265 SWNWDG--SKLLTTCKDKK--MRIINPRTGAIEEEAVCHEGSKATRAIYLKSG-LIFTTGFSKM---SERQYSLRAPDHL  336 (490)
Q Consensus       265 ~~~~~~--~~l~~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~l~~~~~~~---~~~~i~iwd~~~~  336 (490)
                      .+.+++  .+++....||.  |++|+...+.... +.. ....+..+ +++++ .++.++....   ....|.-.++...
T Consensus       325 ~~~~~~~~~~~~~s~~dg~~~ly~~~~~g~~~~~-lt~-g~~~v~~~-~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g~  401 (470)
T d2bgra1         325 HFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITK-GTWEVIGI-EALTSDYLYYISNEYKGMPGGRNLYKIQLSDY  401 (470)
T ss_dssp             EECTTSSEEEEEEECTTSCEEEEEEETTCSCCEE-SCC-SSSCEEEE-EEECSSEEEEEESCGGGCTTCBEEEEEETTCT
T ss_pred             eeeecCCCcEEEEeccCcCceeEEEeccCCceee-ecc-CCeeEEEE-EEECCCEEEEEEecCCCCcceEEEEEEECCCC
Confidence            344444  34556667766  4555655444433 322 22335555 33333 3333443211   1123443445443


Q ss_pred             CCCeEEE--eccCCCceeeeeecCCCCeEEEEecCC--CeEEEEEecCCC
Q psy17682        337 DEPIVMV--ELDTSNGVMFPLYDPDTNLVYLCGKGD--SVIRYFEITAEP  382 (490)
Q Consensus       337 ~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~g~~d--g~i~iwd~~~~~  382 (490)
                      .....+.  ...+..++..++|||||++++.+.+..  -.+.+|+..+++
T Consensus       402 ~~~~~lt~~~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~~l~~~~~g~  451 (470)
T d2bgra1         402 TKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDK  451 (470)
T ss_dssp             TCEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTE
T ss_pred             CceeEecccccCCCCCEEEEEECCCCCEEEEEecCCCCCeEEEEECCCCC
Confidence            3222211  124566789999999999986665544  358999998887

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.31  E-value=3.9e-09  Score=92.96  Aligned_cols=228  Identities=14%  Similarity=0.182  Sum_probs=138.6

Q ss_pred             ceeecccCCeeEEEECCCCCCEEEEEeCCC--cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC
Q psy17682        159 ALVGGHKGPVLDIAWSPHDDNVIASGSEDC--VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS  236 (490)
Q Consensus       159 ~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~  236 (490)
                      +.+..+...+...+|||||+.+.++....+  .+.+.+...+....        +..+........|+|++..++.....
T Consensus        32 ~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~spdg~~i~~~~~~  103 (269)
T d2hqsa1          32 FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ--------VASFPRHNGAPAFSPDGSKLAFALSK  103 (269)
T ss_dssp             EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE--------EECCSSCEEEEEECTTSSEEEEEECT
T ss_pred             EEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeE--------EeeeecccccceecCCCCeeeEeeec
Confidence            344456778899999999944444444443  35555554444322        23377788899999999744444444


Q ss_pred             CCcEEEE--ECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe-CCC--eEEEEeCCCCceeeeeeecCCCceeEEEEeC
Q psy17682        237 DNNVAIW--NVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC-KDK--KMRIINPRTGAIEEEAVCHEGSKATRAIYLK  311 (490)
Q Consensus       237 dg~v~iw--d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~  311 (490)
                      ++...++  ....... ..............+++++..++..+ .++  .|.+.++..+...... ... .......|+|
T Consensus       104 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~-~~~-~~~~~~~~sp  180 (269)
T d2hqsa1         104 TGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRIT-WEG-SQNQDADVSS  180 (269)
T ss_dssp             TSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECC-CSS-SEEEEEEECT
T ss_pred             CCccceeecccccccc-eeeeeccccccccccccccccceecccccCCceEeeeecccccceeee-ccc-cccccccccc
Confidence            4443333  3323322 22333445556667888777555544 444  4666676665433322 222 2367788999


Q ss_pred             CCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecC--CCeEEEEEecCCCCeeEEee
Q psy17682        312 SGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKG--DSVIRYFEITAEPPFVHYIN  389 (490)
Q Consensus       312 ~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~--dg~i~iwd~~~~~~~~~~~~  389 (490)
                      +++.++..+.+.....+.+.+.....    ............+.|||||+.|+.+...  ...|+++++..+..  ..+.
T Consensus       181 dg~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~--~~lt  254 (269)
T d2hqsa1         181 DGKFMVMVSSNGGQQHIAKQDLATGG----VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFK--ARLP  254 (269)
T ss_dssp             TSSEEEEEEECSSCEEEEEEETTTCC----EEECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCE--EECC
T ss_pred             ccceeEEEeecCCceeeeEeeccccc----ceEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCCCE--EEEe
Confidence            99998887765555667777766543    1222344556788999999999766543  34678888877651  2222


Q ss_pred             eeeCCCceeeEEEeeC
Q psy17682        390 TFQTPDPQRGIGMMPK  405 (490)
Q Consensus       390 ~~~~~~~i~~~~~sp~  405 (490)
                        .....+...+|||-
T Consensus       255 --~~~g~~~~p~WSP~  268 (269)
T d2hqsa1         255 --ATDGQVKFPAWSPY  268 (269)
T ss_dssp             --CSSSEEEEEEECCC
T ss_pred             --CCCCcEEeEEeCCC
Confidence              23446788899983

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.26  E-value=7.3e-09  Score=95.63  Aligned_cols=165  Identities=8%  Similarity=-0.051  Sum_probs=107.0

Q ss_pred             cCEEEEEEeeCCCCEEEEEe-CCCcEEEEECCCC-eeE--EEEe--cCCCcEEEEEEcCCCCEEEEEe-CCCeEEEEeCC
Q psy17682        216 RRVGLVLWHPTAQNVLLTAG-SDNNVAIWNVGTG-EIM--IQIE--CHPDIVYSASWNWDGSKLLTTC-KDKKMRIINPR  288 (490)
Q Consensus       216 ~~v~~~~~~p~~~~~l~s~~-~dg~v~iwd~~~~-~~~--~~~~--~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~  288 (490)
                      ..+.++.|+|+|+ +++++. ....|.+|+.... +..  ....  ........++|+|+++++.+.. .+++|.+|+..
T Consensus       145 ~h~h~v~~sPdG~-~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~  223 (365)
T d1jofa_         145 TGIHGMVFDPTET-YLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID  223 (365)
T ss_dssp             CCEEEEEECTTSS-EEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             CcceEEEECCCCC-EEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEec
Confidence            3478999999997 555554 4567888876533 222  2222  2356789999999999876655 57899999987


Q ss_pred             CCceeeeee--ec----------------CCCceeEEEEeCCCcEEEEEeC---CCceeEEEEecCCCCCCCeEEEe---
Q psy17682        289 TGAIEEEAV--CH----------------EGSKATRAIYLKSGLIFTTGFS---KMSERQYSLRAPDHLDEPIVMVE---  344 (490)
Q Consensus       289 ~~~~~~~~~--~~----------------~~~~~~~~~~s~~~~~l~~~~~---~~~~~~i~iwd~~~~~~~~~~~~---  344 (490)
                      .++......  ..                .......+.++|+|++|.++..   ......|..|++...........   
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~  303 (365)
T d1jofa_         224 PATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSP  303 (365)
T ss_dssp             TTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEE
T ss_pred             CCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeE
Confidence            654322111  00                0012457889999999887642   11234577777765433221111   


Q ss_pred             -ccCCCceeeeeecC-CCCeEEEEecCCCeEEEEEecCC
Q psy17682        345 -LDTSNGVMFPLYDP-DTNLVYLCGKGDSVIRYFEITAE  381 (490)
Q Consensus       345 -~~~~~~i~~~~~s~-~~~~l~~~g~~dg~i~iwd~~~~  381 (490)
                       .........++++| +|++|++++..++.|.+|+++..
T Consensus       304 ~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~  342 (365)
T d1jofa_         304 TPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             CSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             EEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence             11223457789998 89999888889999999998765

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.20  E-value=1.5e-08  Score=89.78  Aligned_cols=246  Identities=9%  Similarity=0.087  Sum_probs=158.8

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEE-eCCCcEEEEEC
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTA-GSDNNVAIWNV  245 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-~~dg~v~iwd~  245 (490)
                      .-..++++|+| +++++-...+.|++||. +++.+..+.... ...+.......+++.++....+++. +.++.|.+++.
T Consensus        24 ~P~gvavd~dg-~i~VaD~~n~rI~v~d~-~G~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~  100 (279)
T d1q7fa_          24 EPSGVAVNAQN-DIIVADTNNHRIQIFDK-EGRFKFQFGECG-KRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ  100 (279)
T ss_dssp             CEEEEEECTTC-CEEEEEGGGTEEEEECT-TSCEEEEECCBS-SSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT
T ss_pred             CccEEEEcCCC-CEEEEECCCCEEEEEeC-CCCEEEEecccC-CCcccccccccccccccccccceeccCCccccccccc
Confidence            46799999988 77777777889999995 465554442210 0111223445666666644344433 34567777775


Q ss_pred             CCCeeEEEEe-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeec-CCCceeEEEEeCCCcEEEEEeCCC
Q psy17682        246 GTGEIMIQIE-CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCH-EGSKATRAIYLKSGLIFTTGFSKM  323 (490)
Q Consensus       246 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~~~~~~  323 (490)
                       .++....+. ........+++.++++++++....+.+.+++.. ++.+.++... .......+++.+++.++++..   
T Consensus       101 -~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~---  175 (279)
T d1q7fa_         101 -YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDN---  175 (279)
T ss_dssp             -TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEG---
T ss_pred             -cccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccC-CceeecccccccccccceeeeccceeEEeeec---
Confidence             566666664 345567899999999988888888889999865 5555555322 123477888999999888776   


Q ss_pred             ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEe-cCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEE
Q psy17682        324 SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCG-KGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGM  402 (490)
Q Consensus       324 ~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~  402 (490)
                      ..+.|++||... +....+...........++++++|+.+ ++- ..++.|.+|+. +++ +...+..........+|++
T Consensus       176 ~~~~V~~~d~~G-~~~~~~g~~g~~~~P~giavD~~G~i~-Vad~~~~~~v~~f~~-~G~-~~~~~~~~~~~~~p~~vav  251 (279)
T d1q7fa_         176 RAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEIL-IADNHNNFNLTIFTQ-DGQ-LISALESKVKHAQCFDVAL  251 (279)
T ss_dssp             GGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEE-EEECSSSCEEEEECT-TSC-EEEEEEESSCCSCEEEEEE
T ss_pred             cccceeeeecCC-ceeeeecccccccCCcccccccCCeEE-EEECCCCcEEEEECC-CCC-EEEEEeCCCCCCCEeEEEE
Confidence            678899999764 211111111223346788999999866 554 34557999984 454 3333322222235789999


Q ss_pred             eeCceeEEee-cceeEEEEecCC
Q psy17682        403 MPKRGCDVNS-CEIGRFFRLNNS  424 (490)
Q Consensus       403 sp~~~~l~~~-~~~~~~~~~~~~  424 (490)
                      .|+|.++++. ...+++|+....
T Consensus       252 ~~dG~l~V~~~n~~v~~fr~~~~  274 (279)
T d1q7fa_         252 MDDGSVVLASKDYRLYIYRYVQL  274 (279)
T ss_dssp             ETTTEEEEEETTTEEEEEECSCC
T ss_pred             eCCCcEEEEeCCCeEEEEEeeee
Confidence            9999887766 336778886654

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.19  E-value=5.2e-09  Score=91.72  Aligned_cols=239  Identities=8%  Similarity=0.009  Sum_probs=152.0

Q ss_pred             CCeeEEEECCCCCCEEEE-EeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682        166 GPVLDIAWSPHDDNVIAS-GSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN  244 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd  244 (490)
                      -.-.++++.++| ++.++ .+..+.+..++......... .     .. -......+++.+++. ++++....+.+++++
T Consensus        14 ~~P~~vavd~dG-~i~v~~~~~~~~i~~~~~~~~~~~~~-~-----~~-~~~~p~gvav~~~g~-i~v~d~~~~~i~~~~   84 (260)
T d1rwia_          14 LSPSGVAVDSAG-NVYVTSEGMYGRVVKLATGSTGTTVL-P-----FN-GLYQPQGLAVDGAGT-VYVTDFNNRVVTLAA   84 (260)
T ss_dssp             CCEEEEEECTTC-CEEEEECSSSCEEEEEC----CEEEC-C-----CC-SCCSCCCEEECTTCC-EEEEETTTEEEEECT
T ss_pred             CCCCEEEEcCCC-CEEEEEcCCCCEEEEEcCCCceEEEe-c-----cC-CccCceEEEEcCCCC-EEEeeeeeceeeeee
Confidence            345799999998 55554 45557777776543322111 0     11 122357889999984 777766666676666


Q ss_pred             CCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCc
Q psy17682        245 VGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMS  324 (490)
Q Consensus       245 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~  324 (490)
                      -.+...+.... ......++++.++++++++-..+..+..++........ ...........++++++|+++++..   .
T Consensus        85 ~~~~~~~~~~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~i~~~~~g~~~v~~~---~  159 (260)
T d1rwia_          85 GSNNQTVLPFD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV-LPFTGLNDPDGVAVDNSGNVYVTDT---D  159 (260)
T ss_dssp             TCSCCEECCCC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEE-CCCCSCCSCCEEEECTTCCEEEEEG---G
T ss_pred             eccceeeeeee-eeeecccccccccceeEeeccccccccccccccceeee-eeecccCCcceeeecCCCCEeeecc---c
Confidence            55444433332 34567899999999988877777778888876544322 2211222367899999999887766   5


Q ss_pred             eeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee
Q psy17682        325 ERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP  404 (490)
Q Consensus       325 ~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp  404 (490)
                      .+.|..++.+...  ..............++++++|+++ ++....+.|..++......  .... ...-....+|++++
T Consensus       160 ~~~i~~~d~~~~~--~~~~~~~~~~~p~gi~~d~~g~l~-vsd~~~~~i~~~~~~~~~~--~~~~-~~~~~~P~~i~~d~  233 (260)
T d1rwia_         160 NNRVVKLEAESNN--QVVLPFTDITAPWGIAVDEAGTVY-VTEHNTNQVVKLLAGSTTS--TVLP-FTGLNTPLAVAVDS  233 (260)
T ss_dssp             GTEEEEECTTTCC--EEECCCSSCCSEEEEEECTTCCEE-EEETTTTEEEEECTTCSCC--EECC-CCSCCCEEEEEECT
T ss_pred             cccccccccccce--eeeeeccccCCCccceeeeeeeee-eeecCCCEEEEEeCCCCeE--EEEc-cCCCCCeEEEEEeC
Confidence            6788888877543  122222334456889999999765 7777788888887655431  1221 12223568999999


Q ss_pred             CceeEEeecceeEEEEecCC
Q psy17682        405 KRGCDVNSCEIGRFFRLNNS  424 (490)
Q Consensus       405 ~~~~l~~~~~~~~~~~~~~~  424 (490)
                      +|.+.++.....+++++.+.
T Consensus       234 ~g~l~vad~~~~rI~~i~~~  253 (260)
T d1rwia_         234 DRTVYVADRGNDRVVKLTSL  253 (260)
T ss_dssp             TCCEEEEEGGGTEEEEECCC
T ss_pred             CCCEEEEECCCCEEEEEeCC
Confidence            99888887666688877654

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.13  E-value=1.1e-08  Score=91.71  Aligned_cols=226  Identities=8%  Similarity=-0.039  Sum_probs=145.0

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG  246 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~  246 (490)
                      .+..+++.|+| +++++...+++|..|+.. ++. ..       +......+.+++|.++|. ++++...++.+..++..
T Consensus        29 ~~e~iAv~pdG-~l~vt~~~~~~I~~i~p~-g~~-~~-------~~~~~~~~~gla~~~dG~-l~v~~~~~~~~~~~~~~   97 (302)
T d2p4oa1          29 FLENLASAPDG-TIFVTNHEVGEIVSITPD-GNQ-QI-------HATVEGKVSGLAFTSNGD-LVATGWNADSIPVVSLV   97 (302)
T ss_dssp             CEEEEEECTTS-CEEEEETTTTEEEEECTT-CCE-EE-------EEECSSEEEEEEECTTSC-EEEEEECTTSCEEEEEE
T ss_pred             CcCCEEECCCC-CEEEEeCCCCEEEEEeCC-CCE-EE-------EEcCCCCcceEEEcCCCC-eEEEecCCceEEEEEec
Confidence            57889999998 799999999998888843 332 21       223556789999999995 88888888888888765


Q ss_pred             CCe-eEEEEe--cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeec--------C-CCceeEEEEeCCCc
Q psy17682        247 TGE-IMIQIE--CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCH--------E-GSKATRAIYLKSGL  314 (490)
Q Consensus       247 ~~~-~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------~-~~~~~~~~~s~~~~  314 (490)
                      ... ....+.  ........+++.++++++++.+.++.+..+|...+.........        . ......+.++.+ .
T Consensus        98 ~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~-~  176 (302)
T d2p4oa1          98 KSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGN-F  176 (302)
T ss_dssp             CTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETT-E
T ss_pred             ccccceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccCC-c
Confidence            432 112221  24556889999999999998888999999998876533222210        0 112345555543 3


Q ss_pred             EEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC
Q psy17682        315 IFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP  394 (490)
Q Consensus       315 ~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~  394 (490)
                      ++++.+   ..+.|..++.....................++++++|+++ ++...++.|..++.....  ..........
T Consensus       177 l~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~-va~~~~~~V~~i~p~G~~--~~~~~~~~~~  250 (302)
T d2p4oa1         177 LYVSNT---EKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLY-GATHIYNSVVRIAPDRST--TIIAQAEQGV  250 (302)
T ss_dssp             EEEEET---TTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEE-EECBTTCCEEEECTTCCE--EEEECGGGTC
T ss_pred             eeeecC---CCCeEEeccccccccccccccccCCCCCcceEECCCCCEE-EEEcCCCcEEEECCCCCE--EEEEecCCCC
Confidence            334444   4677877777654332222222223446779999999865 666678888888765432  1222212233


Q ss_pred             CceeeEEE---eeCceeEE
Q psy17682        395 DPQRGIGM---MPKRGCDV  410 (490)
Q Consensus       395 ~~i~~~~~---sp~~~~l~  410 (490)
                      ...++++|   ++|++.|.
T Consensus       251 ~~pt~vafg~~~~D~~~Ly  269 (302)
T d2p4oa1         251 IGSTAVAFGQTEGDCTAIY  269 (302)
T ss_dssp             TTEEEEEECCSTTTTTEEE
T ss_pred             CCceEEEEcCCCCCCCEEE
Confidence            45789999   56665443

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.08  E-value=3.1e-07  Score=80.36  Aligned_cols=219  Identities=10%  Similarity=0.038  Sum_probs=130.4

Q ss_pred             cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEE-eCCC--cEEEEECCCCeeEEEEecCCCcEEEEE
Q psy17682        189 VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTA-GSDN--NVAIWNVGTGEIMIQIECHPDIVYSAS  265 (490)
Q Consensus       189 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~-~~dg--~v~iwd~~~~~~~~~~~~~~~~v~~~~  265 (490)
                      .|.|.|..... .+.+       ..+...+.+.+|+|||+ .||-. ...+  .+.+.+...+... .+..+........
T Consensus        20 ~l~i~d~dG~~-~~~l-------~~~~~~~~sP~wSPDGk-~IAf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   89 (269)
T d2hqsa1          20 ELRVSDYDGYN-QFVV-------HRSPQPLMSPAWSPDGS-KLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPA   89 (269)
T ss_dssp             EEEEEETTSCS-CEEE-------EEESSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEE
T ss_pred             EEEEEcCCCCC-cEEE-------ecCCCceeeeEECCCCC-EEEEEEeeccCcceeeeecccCcee-EEeeeecccccce
Confidence            46777764333 2332       22567788999999997 55544 3333  4666676665544 4444778888999


Q ss_pred             EcCCCCEEEEEeC-CCe--EEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE
Q psy17682        266 WNWDGSKLLTTCK-DKK--MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM  342 (490)
Q Consensus       266 ~~~~~~~l~~~~~-dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~  342 (490)
                      |+|+|+.++.... ++.  +..+............ ... ......+++++..+...+.......+.+.++.....   .
T Consensus        90 ~spdg~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~---~  164 (269)
T d2hqsa1          90 FSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTD-GRS-NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP---Q  164 (269)
T ss_dssp             ECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCC-CSS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC---E
T ss_pred             ecCCCCeeeEeeecCCccceeecccccccceeeee-ccc-cccccccccccccceecccccCCceEeeeecccccc---e
Confidence            9999998887664 333  3333333333222222 222 255667788877665554332344677777766442   1


Q ss_pred             EeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeec---c--eeE
Q psy17682        343 VELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSC---E--IGR  417 (490)
Q Consensus       343 ~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~---~--~~~  417 (490)
                      .............|+|+++.++......+...+|.........+.+   ..........|||||+.++-..   +  .+.
T Consensus       165 ~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~  241 (269)
T d2hqsa1         165 RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL---SSTFLDETPSLAPNGTMVIYSSSQGMGSVLN  241 (269)
T ss_dssp             ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC---CCSSSCEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred             eeecccccccccccccccceeEEEeecCCceeeeEeecccccceEe---ecCccccceEECCCCCEEEEEEcCCCCcEEE
Confidence            2223345567889999999997777666766666666544222222   3344667889999998876432   2  334


Q ss_pred             EEEecCCC
Q psy17682        418 FFRLNNSG  425 (490)
Q Consensus       418 ~~~~~~~~  425 (490)
                      ++++..+.
T Consensus       242 ~~~~dg~~  249 (269)
T d2hqsa1         242 LVSTDGRF  249 (269)
T ss_dssp             EEETTSCC
T ss_pred             EEECCCCC
Confidence            55555444

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.06  E-value=4.2e-08  Score=85.74  Aligned_cols=195  Identities=9%  Similarity=0.022  Sum_probs=124.8

Q ss_pred             eeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCC
Q psy17682        168 VLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGT  247 (490)
Q Consensus       168 V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~  247 (490)
                      ..+++++++| +++++....+.+++++-.+.......        .......++++.+++. ++++-..+..+..++...
T Consensus        59 p~gvav~~~g-~i~v~d~~~~~i~~~~~~~~~~~~~~--------~~~~~p~~iavd~~g~-i~v~d~~~~~~~~~~~~~  128 (260)
T d1rwia_          59 PQGLAVDGAG-TVYVTDFNNRVVTLAAGSNNQTVLPF--------DGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGS  128 (260)
T ss_dssp             CCCEEECTTC-CEEEEETTTEEEEECTTCSCCEECCC--------CSCCSEEEEEECTTCC-EEEEEGGGTEEEEECTTC
T ss_pred             ceEEEEcCCC-CEEEeeeeeceeeeeeeccceeeeee--------eeeeecccccccccce-eEeecccccccccccccc
Confidence            4577899987 67777666666666554433322211        1234578999999984 777666667777777655


Q ss_pred             CeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeE
Q psy17682        248 GEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQ  327 (490)
Q Consensus       248 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~  327 (490)
                      ................++++++++.+++...++.|..+|............... ....+++.++|+++++..   ..+.
T Consensus       129 ~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~-~p~gi~~d~~g~l~vsd~---~~~~  204 (260)
T d1rwia_         129 KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDIT-APWGIAVDEAGTVYVTEH---NTNQ  204 (260)
T ss_dssp             SSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCC-SEEEEEECTTCCEEEEET---TTTE
T ss_pred             ceeeeeeecccCCcceeeecCCCCEeeeccccccccccccccceeeeeeccccC-CCccceeeeeeeeeeeec---CCCE
Confidence            433222222234567899999999888888889999999876543322222223 378899999999888776   4566


Q ss_pred             EEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        328 YSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       328 i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      |..++.....  ..............++++++|+.+ ++-..++.|+.++..
T Consensus       205 i~~~~~~~~~--~~~~~~~~~~~P~~i~~d~~g~l~-vad~~~~rI~~i~~~  253 (260)
T d1rwia_         205 VVKLLAGSTT--STVLPFTGLNTPLAVAVDSDRTVY-VADRGNDRVVKLTSL  253 (260)
T ss_dssp             EEEECTTCSC--CEECCCCSCCCEEEEEECTTCCEE-EEEGGGTEEEEECCC
T ss_pred             EEEEeCCCCe--EEEEccCCCCCeEEEEEeCCCCEE-EEECCCCEEEEEeCC
Confidence            7777765432  122222223456789999998754 666666766655443

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.04  E-value=9.4e-08  Score=85.86  Aligned_cols=250  Identities=10%  Similarity=0.011  Sum_probs=148.0

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeC-------CCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEE
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSE-------DCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLL  232 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~  232 (490)
                      .+...-....+++|.|+| +++++...       +|+|..||..++...... .+.  ..........+.|.+++. +++
T Consensus        12 ~v~~~~~g~EGpa~d~dG-~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~-~~~--~~~~~g~P~Gl~~~~dg~-~l~   86 (314)
T d1pjxa_          12 KVTEDIPGAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTVIC-KPE--VNGYGGIPAGCQCDRDAN-QLF   86 (314)
T ss_dssp             EEECCCTTCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEEEE-CCE--ETTEECCEEEEEECSSSS-EEE
T ss_pred             EeecCCCCCeEeEEeCCC-CEEEEECccccccccCCEEEEEECCCCcEEEEE-CCc--cccCCCcceeEEEeCCCC-EEE
Confidence            333334456788999998 66655332       467888888776543221 110  111223467899999985 777


Q ss_pred             EEeCCCcEEEEECCCCeeEEEEecCC----CcEEEEEEcCCCCEEEEEeC---------------CCeEEEEeCCCCcee
Q psy17682        233 TAGSDNNVAIWNVGTGEIMIQIECHP----DIVYSASWNWDGSKLLTTCK---------------DKKMRIINPRTGAIE  293 (490)
Q Consensus       233 s~~~dg~v~iwd~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~---------------dg~i~iwd~~~~~~~  293 (490)
                      ++...+.|...+...+..........    ...+.+++.++|++.++-..               .|.|+.++.. ++..
T Consensus        87 vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d-g~~~  165 (314)
T d1pjxa_          87 VADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI  165 (314)
T ss_dssp             EEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE
T ss_pred             EEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeec-Ccee
Confidence            77777778888976543222111111    13578999999998877432               2455555543 3333


Q ss_pred             eeeeecCCCceeEEEEeCCCc-----EEEEEeCCCceeEEEEecCCCCCCCeE---EEecc--CCCceeeeeecCCCCeE
Q psy17682        294 EEAVCHEGSKATRAIYLKSGL-----IFTTGFSKMSERQYSLRAPDHLDEPIV---MVELD--TSNGVMFPLYDPDTNLV  363 (490)
Q Consensus       294 ~~~~~~~~~~~~~~~~s~~~~-----~l~~~~~~~~~~~i~iwd~~~~~~~~~---~~~~~--~~~~i~~~~~s~~~~~l  363 (490)
                      ..... .. ....++|++++.     ++++-+   ..+.|..|++........   .....  .......+++..+|+..
T Consensus       166 ~~~~~-~~-~pNGi~~~~d~d~~~~~lyv~d~---~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~Gnly  240 (314)
T d1pjxa_         166 QVDTA-FQ-FPNGIAVRHMNDGRPYQLIVAET---PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLL  240 (314)
T ss_dssp             EEEEE-ES-SEEEEEEEECTTSCEEEEEEEET---TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEE
T ss_pred             EeeCC-cc-eeeeeEECCCCCcceeEEEEEee---cccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEE
Confidence            22222 22 257888988763     444433   467788887764332211   11111  11235678999999875


Q ss_pred             EEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCce-eEEeecceeEEEEecCC
Q psy17682        364 YLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRG-CDVNSCEIGRFFRLNNS  424 (490)
Q Consensus       364 ~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~~~~~~~~~~~  424 (490)
                       ++....+.|.+||...++.. ..+.  ......++++|.||++ +.++.....++|.++..
T Consensus       241 -Va~~~~g~I~~~dp~~g~~~-~~i~--~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~  298 (314)
T d1pjxa_         241 -VANWGSSHIEVFGPDGGQPK-MRIR--CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             -EEEETTTEEEEECTTCBSCS-EEEE--CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred             -EEEcCCCEEEEEeCCCCEEE-EEEE--CCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence             66667789999998876522 1221  1224678999999986 55665666677776543

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.04  E-value=4.7e-07  Score=81.16  Aligned_cols=201  Identities=8%  Similarity=0.016  Sum_probs=127.0

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeeccc-ccCEEEEEEeeCCCCEEEEEeC---------
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYH-QRRVGLVLWHPTAQNVLLTAGS---------  236 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~s~~~---------  236 (490)
                      .-..++|.+++ +.++++...+.|...+........ +...   ..+. -.....+++.++|. +.++-..         
T Consensus        72 ~P~Gl~~~~dg-~~l~vad~~~~i~~~~~~g~~~~~-~~~~---~~g~~~~~pndl~~d~~G~-lyvtd~~~~~~~~~~~  145 (314)
T d1pjxa_          72 IPAGCQCDRDA-NQLFVADMRLGLLVVQTDGTFEEI-AKKD---SEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYT  145 (314)
T ss_dssp             CEEEEEECSSS-SEEEEEETTTEEEEEETTSCEEEC-CSBC---TTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCC
T ss_pred             cceeEEEeCCC-CEEEEEECCCeEEEEeCCCcEEEE-Eecc---ccccccCCCcEEEECCCCC-EEEecCccCccccccc
Confidence            45789999988 677777776778888865443211 1100   0111 11357899999985 6665321         


Q ss_pred             ------CCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCC-----EEEEEeCCCeEEEEeCCCCceeeee------eec
Q psy17682        237 ------DNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS-----KLLTTCKDKKMRIINPRTGAIEEEA------VCH  299 (490)
Q Consensus       237 ------dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~dg~i~iwd~~~~~~~~~~------~~~  299 (490)
                            +|.|..++. .++...... .....+.++|+|++.     ++++-+..+.|+.||+.....+...      ...
T Consensus       146 ~~~~~~~G~v~~~~~-dg~~~~~~~-~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~  223 (314)
T d1pjxa_         146 RSMQEKFGSIYCFTT-DGQMIQVDT-AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGT  223 (314)
T ss_dssp             BTTSSSCEEEEEECT-TSCEEEEEE-EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred             ceeccCCceEEEEee-cCceeEeeC-CcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEcccc
Confidence                  233444443 344333222 334457899998764     4555567889999987644333221      111


Q ss_pred             CCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        300 EGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       300 ~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      .......+++..+|+++++..   ..+.|.+||.+.......+. . .....++++|.|+++.||++.+.+|.|..+++.
T Consensus       224 ~~~~pdGiavD~~GnlyVa~~---~~g~I~~~dp~~g~~~~~i~-~-p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~  298 (314)
T d1pjxa_         224 HEGGADGMDFDEDNNLLVANW---GSSHIEVFGPDGGQPKMRIR-C-PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             SSCEEEEEEEBTTCCEEEEEE---TTTEEEEECTTCBSCSEEEE-C-SSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred             ccccceeeEEecCCcEEEEEc---CCCEEEEEeCCCCEEEEEEE-C-CCCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence            112256789999999887765   46789999988655333322 2 235678999999999888998888988888876


Q ss_pred             C
Q psy17682        380 A  380 (490)
Q Consensus       380 ~  380 (490)
                      .
T Consensus       299 ~  299 (314)
T d1pjxa_         299 R  299 (314)
T ss_dssp             S
T ss_pred             C
Confidence            5

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.04  E-value=8.3e-08  Score=85.90  Aligned_cols=190  Identities=11%  Similarity=0.070  Sum_probs=123.1

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWN  244 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd  244 (490)
                      .+.+.+++|.|+| +++++...++.+..++.........   ... ..........+.+.+++. ++++-+.++.+..++
T Consensus        67 ~~~~~gla~~~dG-~l~v~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~n~i~~~~~g~-~~v~~~~~~~i~~~~  140 (302)
T d2p4oa1          67 EGKVSGLAFTSNG-DLVATGWNADSIPVVSLVKSDGTVE---TLL-TLPDAIFLNGITPLSDTQ-YLTADSYRGAIWLID  140 (302)
T ss_dssp             SSEEEEEEECTTS-CEEEEEECTTSCEEEEEECTTSCEE---EEE-ECTTCSCEEEEEESSSSE-EEEEETTTTEEEEEE
T ss_pred             CCCcceEEEcCCC-CeEEEecCCceEEEEEeccccccee---ecc-ccCCccccceeEEccCCC-EEeeccccccceeee
Confidence            3468899999998 7888888888888888654332111   000 112345678999999984 788878888899999


Q ss_pred             CCCCeeEEEEe----------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee--ecCCCceeEEEEeCC
Q psy17682        245 VGTGEIMIQIE----------CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV--CHEGSKATRAIYLKS  312 (490)
Q Consensus       245 ~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~s~~  312 (490)
                      ...+.......          ........+.+.. +.++++.+..+.|+.++...........  .... ....++++++
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~-~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~pdgia~d~d  218 (302)
T d2p4oa1         141 VVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG-NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQT-NIDDFAFDVE  218 (302)
T ss_dssp             TTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET-TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESC-CCSSEEEBTT
T ss_pred             ccCCcceeEecCCccceeeccCcccccccccccC-CceeeecCCCCeEEeccccccccccccccccCCC-CCcceEECCC
Confidence            88765333222          1123356676653 3456666778889999887654322211  1222 2678999999


Q ss_pred             CcEEEEEeCCCceeEEEEecCCCCCCCeEEEec-cCCCceeeeee---cCCCCeEEEEe
Q psy17682        313 GLIFTTGFSKMSERQYSLRAPDHLDEPIVMVEL-DTSNGVMFPLY---DPDTNLVYLCG  367 (490)
Q Consensus       313 ~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~-~~~~~i~~~~~---s~~~~~l~~~g  367 (490)
                      |.++++..   .++.|..++....  ...+... ......++++|   ++|++.||++.
T Consensus       219 G~l~va~~---~~~~V~~i~p~G~--~~~~~~~~~~~~~pt~vafg~~~~D~~~Lyvtt  272 (302)
T d2p4oa1         219 GNLYGATH---IYNSVVRIAPDRS--TTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVT  272 (302)
T ss_dssp             CCEEEECB---TTCCEEEECTTCC--EEEEECGGGTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred             CCEEEEEc---CCCcEEEECCCCC--EEEEEecCCCCCCceEEEEcCCCCCCCEEEEEC
Confidence            99887765   4667888877642  1122222 23455789999   77889887764

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.02  E-value=6.4e-07  Score=78.87  Aligned_cols=246  Identities=9%  Similarity=0.113  Sum_probs=154.8

Q ss_pred             ceeeeEEeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCC-CCcccccCCeeEeccccc
Q psy17682         45 RRVGLVLWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKG-GANRNSTANEITISEDYV  123 (490)
Q Consensus        45 ~~V~~v~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~  123 (490)
                      ..-..|++.|++ +++++-.....|++||.....                   ....+... ..........+++..+. 
T Consensus        23 ~~P~gvavd~dg-~i~VaD~~n~rI~v~d~~G~~-------------------~~~~~~~~~~~~~~~~p~~~~~~~~~-   81 (279)
T d1q7fa_          23 TEPSGVAVNAQN-DIIVADTNNHRIQIFDKEGRF-------------------KFQFGECGKRDSQLLYPNRVAVVRNS-   81 (279)
T ss_dssp             SCEEEEEECTTC-CEEEEEGGGTEEEEECTTSCE-------------------EEEECCBSSSTTCBSSEEEEEEETTT-
T ss_pred             CCccEEEEcCCC-CEEEEECCCCEEEEEeCCCCE-------------------EEEecccCCCcccccccccccccccc-
Confidence            346899999998 777776777899999876421                   11111000 00001111222222221 


Q ss_pred             cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCccee-ecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccc
Q psy17682        124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALV-GGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISR  202 (490)
Q Consensus       124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~  202 (490)
                        -..++.....++.+.+++..      +.   ....+ ..+.....++++.++| .++++....+.+.+++. +++.+.
T Consensus        82 --~~~~~~~~~~~~~i~~~~~~------g~---~~~~~~~~~~~~p~~~avd~~G-~i~v~~~~~~~~~~~~~-~g~~~~  148 (279)
T d1q7fa_          82 --GDIIVTERSPTHQIQIYNQY------GQ---FVRKFGATILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQ-NGNVLH  148 (279)
T ss_dssp             --TEEEEEECGGGCEEEEECTT------SC---EEEEECTTTCSCEEEEEECTTS-CEEEEETTTTEEEEECT-TSCEEE
T ss_pred             --cccceeccCCcccccccccc------cc---ceeecCCCcccccceeccccCC-cEEEEeeccceeeEecc-CCceee
Confidence              01223334445566666543      11   11122 1234567789999988 67777777777888874 455444


Q ss_pred             ccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeC-C
Q psy17682        203 TLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE--CHPDIVYSASWNWDGSKLLTTCK-D  279 (490)
Q Consensus       203 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-d  279 (490)
                      .+.     ...+......+++.+++ +++++....+.|.+||. +++.+.++.  +.......+++.++|+.+++-.. +
T Consensus       149 ~~g-----~~~~~~~~~~i~~d~~g-~i~v~d~~~~~V~~~d~-~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~  221 (279)
T d1q7fa_         149 KFG-----CSKHLEFPNGVVVNDKQ-EIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN  221 (279)
T ss_dssp             EEE-----CTTTCSSEEEEEECSSS-EEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS
T ss_pred             ccc-----ccccccccceeeeccce-eEEeeeccccceeeeec-CCceeeeecccccccCCcccccccCCeEEEEECCCC
Confidence            332     12355678899999998 48888888899999996 567777664  34556889999999997777554 4


Q ss_pred             CeEEEEeCCCCceeeeeeecC-CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC
Q psy17682        280 KKMRIINPRTGAIEEEAVCHE-GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL  336 (490)
Q Consensus       280 g~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~  336 (490)
                      +.|.+|+ .+++.+.++.... ......+++.++|.++++.    .++.|++|.....
T Consensus       222 ~~v~~f~-~~G~~~~~~~~~~~~~~p~~vav~~dG~l~V~~----~n~~v~~fr~~~~  274 (279)
T d1q7fa_         222 FNLTIFT-QDGQLISALESKVKHAQCFDVALMDDGSVVLAS----KDYRLYIYRYVQL  274 (279)
T ss_dssp             CEEEEEC-TTSCEEEEEEESSCCSCEEEEEEETTTEEEEEE----TTTEEEEEECSCC
T ss_pred             cEEEEEC-CCCCEEEEEeCCCCCCCEeEEEEeCCCcEEEEe----CCCeEEEEEeeee
Confidence            5799998 4577777665322 2347899999999877654    3678999987654

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=6.8e-07  Score=84.78  Aligned_cols=341  Identities=11%  Similarity=0.068  Sum_probs=173.7

Q ss_pred             EeccCCCceEEeeeCCCeEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeEeccccccceEEEE
Q psy17682         51 LWHPTAQNVLLTAGKEAEPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEITISEDYVKEFKEEI  130 (490)
Q Consensus        51 ~~~p~~~~~l~s~~~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~  130 (490)
                      .|.+++ .++. -..||.|.+||+.++...                .+....    ......+....+|||.  ++..+.
T Consensus        23 ~W~~~~-~~~~-~~~~g~i~~~~~~~~~~~----------------~l~~~~----~~~~~~~~~~~~SpD~--~~vl~~   78 (465)
T d1xfda1          23 KWISDT-EFIY-REQKGTVRLWNVETNTST----------------VLIEGK----KIESLRAIRYEISPDR--EYALFS   78 (465)
T ss_dssp             CBSSSS-CBCC-CCSSSCEEEBCGGGCCCE----------------EEECTT----TTTTTTCSEEEECTTS--SEEEEE
T ss_pred             EEeCCC-cEEE-EeCCCcEEEEECCCCCEE----------------EEEcCc----cccccccceeEECCCC--CeEEEE
Confidence            588877 4544 355788999999876511                111100    0111245667789985  332211


Q ss_pred             Ee------eCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCccccc
Q psy17682        131 RK------LKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTL  204 (490)
Q Consensus       131 ~~------~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  204 (490)
                      ..      .+..+.+.++++..     +... .+.........+....|||+|. .+|-.. ++.|.+.+..++...+..
T Consensus        79 ~~~~~~~r~s~~~~~~i~d~~~-----~~~~-~l~~~~~~~~~l~~~~wSPDG~-~iafv~-~~nl~~~~~~~~~~~~lt  150 (465)
T d1xfda1          79 YNVEPIYQHSYTGYYVLSKIPH-----GDPQ-SLDPPEVSNAKLQYAGWGPKGQ-QLIFIF-ENNIYYCAHVGKQAIRVV  150 (465)
T ss_dssp             ESCCCCSSSCCCSEEEEEESSS-----CCCE-ECCCTTCCSCCCSBCCBCSSTT-CEEEEE-TTEEEEESSSSSCCEEEE
T ss_pred             EcccceeEeeccccEEEEEccC-----Ccee-eccCccCCccccceeeeccCCc-eEEEEe-cceEEEEecCCCceEEEe
Confidence            11      13457788888752     2211 1111122334566789999995 455444 567888887766544332


Q ss_pred             ccce--eeecccc---------cCEEEEEEeeCCCCEEEEEe-CCCcE--------------------------------
Q psy17682        205 TEPV--VDLLYHQ---------RRVGLVLWHPTAQNVLLTAG-SDNNV--------------------------------  240 (490)
Q Consensus       205 ~~~~--~~~~~~~---------~~v~~~~~~p~~~~~l~s~~-~dg~v--------------------------------  240 (490)
                      ....  ..+.+..         ..-..+.|+|+|+ .||... .+..|                                
T Consensus       151 ~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk-~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~  229 (465)
T d1xfda1         151 STGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGT-RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSIS  229 (465)
T ss_dssp             CCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSS-EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEE
T ss_pred             cccCcceeeccccchhhhhhhccccceEEECCCCC-eEEEEEecccccceeecccccccccceeeeeeccccCCCCCcee
Confidence            1100  0011111         1125778999997 555543 23333                                


Q ss_pred             -EEEECCCCeeEEEEe------cCCCcEEEEEEcCCCCEEEEEeC-C---CeEEEEeCCCCceeeeeeecCCC----cee
Q psy17682        241 -AIWNVGTGEIMIQIE------CHPDIVYSASWNWDGSKLLTTCK-D---KKMRIINPRTGAIEEEAVCHEGS----KAT  305 (490)
Q Consensus       241 -~iwd~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~-d---g~i~iwd~~~~~~~~~~~~~~~~----~~~  305 (490)
                       .++|+.++.......      ....-+..+.|+|+++.++.... +   ..+.++|..++++...+......    ...
T Consensus       230 l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~  309 (465)
T d1xfda1         230 LHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNE  309 (465)
T ss_dssp             EEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCC
T ss_pred             EEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcCCceEeccCC
Confidence             344443332211111      11223677899999876655432 2   35889999999876555433221    123


Q ss_pred             EEEEeCCCcEEE--EEeC-CCceeEEEEecCCC---CCCCeEEEec-cCCCceee-eeecCCCCeEEEEecCCC--eEEE
Q psy17682        306 RAIYLKSGLIFT--TGFS-KMSERQYSLRAPDH---LDEPIVMVEL-DTSNGVMF-PLYDPDTNLVYLCGKGDS--VIRY  375 (490)
Q Consensus       306 ~~~~s~~~~~l~--~~~~-~~~~~~i~iwd~~~---~~~~~~~~~~-~~~~~i~~-~~~s~~~~~l~~~g~~dg--~i~i  375 (490)
                      ...|+++|+.++  ..+. ++.++ +...++..   .........+ ...-.|.. +.|+++++.+++++..++  .-.+
T Consensus       310 ~p~~~~dg~~~~fi~~se~~g~~~-ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hl  388 (465)
T d1xfda1         310 EPVFSKDGRKFFFIRAIPQGGRGK-FYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQL  388 (465)
T ss_dssp             CCEECTTSCSEEEEEEECCSSSSC-EEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEE
T ss_pred             ceeEccCCCeeEEEEeeeecccCc-eEEEEeccccccCCCceeEEeccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEE
Confidence            467999987432  2222 22233 33222211   0000011111 11223444 468999999988876543  3456


Q ss_pred             EEecCC-CCeeEEee-eeeCCCceeeEEEeeCceeEEeecc-----eeEEEEecCCC
Q psy17682        376 FEITAE-PPFVHYIN-TFQTPDPQRGIGMMPKRGCDVNSCE-----IGRFFRLNNSG  425 (490)
Q Consensus       376 wd~~~~-~~~~~~~~-~~~~~~~i~~~~~sp~~~~l~~~~~-----~~~~~~~~~~~  425 (490)
                      |.+.-. ....+.+. .........++.|||++.+++..+.     ...+++..+++
T Consensus       389 y~v~l~g~~~~~~lt~~~~~~~~~~~~~~S~~~~y~v~~~s~~~~P~~~~~~~~~~~  445 (465)
T d1xfda1         389 YSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKK  445 (465)
T ss_dssp             EEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCC
T ss_pred             EEEECCCCCcceeeccccCCCCCEEEEEECCCCCEEEEEeecCCCCeEEEEECCCCC
Confidence            666522 11111221 1122345679999999999885543     34555555555

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.95  E-value=3.3e-06  Score=75.71  Aligned_cols=230  Identities=9%  Similarity=0.009  Sum_probs=141.7

Q ss_pred             CCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC----CCcEE
Q psy17682        166 GPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS----DNNVA  241 (490)
Q Consensus       166 ~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~----dg~v~  241 (490)
                      ..+.+++|.++| ++.++-...+.|..|+...++....+       .........+++.++|. ++++...    .+.+.
T Consensus        40 ~~lEG~~~D~~G-~Ly~~D~~~g~I~ri~p~g~~~~~~~-------~~~~~~p~gla~~~dG~-l~va~~~~~~~~~~i~  110 (319)
T d2dg1a1          40 LQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKEIKRPF-------VSHKANPAAIKIHKDGR-LFVCYLGDFKSTGGIF  110 (319)
T ss_dssp             CCEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEE-------ECSSSSEEEEEECTTSC-EEEEECTTSSSCCEEE
T ss_pred             cCcEeCEECCCC-CEEEEECCCCEEEEEECCCCeEEEEE-------eCCCCCeeEEEECCCCC-EEEEecCCCccceeEE
Confidence            455789999998 78888778899999987665443322       12445678999999995 6665533    23455


Q ss_pred             EEECCCCeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeC------CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCC
Q psy17682        242 IWNVGTGEIMIQIE--CHPDIVYSASWNWDGSKLLTTCK------DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSG  313 (490)
Q Consensus       242 iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~  313 (490)
                      ..+...+.......  ........+++.++|++.++...      .+.+..++...+.. ..+...-. ....++|+|++
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~-~~~~~~~~-~pnGia~s~dg  188 (319)
T d2dg1a1         111 AATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-TPIIQNIS-VANGIALSTDE  188 (319)
T ss_dssp             EECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE-EEEEEEES-SEEEEEECTTS
T ss_pred             EEcCCCceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEeccccee-EEEeeccc-eeeeeeecccc
Confidence            55555544433332  12345788999999987766432      23466666554433 22222222 37889999999


Q ss_pred             cEEEEEeCCCceeEEEEecCCCCCCCeEEE------eccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEE
Q psy17682        314 LIFTTGFSKMSERQYSLRAPDHLDEPIVMV------ELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHY  387 (490)
Q Consensus       314 ~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~------~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~  387 (490)
                      +.|..+..  ..+.|..|++..........      ..........++++++|++. ++....+.|.+|+- +++ ++..
T Consensus       189 ~~lyvad~--~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~-Va~~~~g~V~~~~p-~G~-~l~~  263 (319)
T d2dg1a1         189 KVLWVTET--TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLY-VAMYGQGRVLVFNK-RGY-PIGQ  263 (319)
T ss_dssp             SEEEEEEG--GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEE-EEEETTTEEEEECT-TSC-EEEE
T ss_pred             ceEEEecc--cCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEE-EEEcCCCEEEEECC-CCc-EEEE
Confidence            86654432  56789999877543222111      11222335678999999865 67777899999995 565 2222


Q ss_pred             eeeee----CCCceeeEEEeeCceeEEe
Q psy17682        388 INTFQ----TPDPQRGIGMMPKRGCDVN  411 (490)
Q Consensus       388 ~~~~~----~~~~i~~~~~sp~~~~l~~  411 (490)
                      +..-.    +...+++++|.|++..++.
T Consensus       264 i~~P~~~~~~~~~~~~~~~~~~~~~~~~  291 (319)
T d2dg1a1         264 ILIPGRDEGHMLRSTHPQFIPGTNQLII  291 (319)
T ss_dssp             EECTTGGGTCSCBCCEEEECTTSCEEEE
T ss_pred             EeCCCcCCCcCceeeeEEEeCCCCEEEE
Confidence            22111    1124689999987654443

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.90  E-value=2.4e-06  Score=76.66  Aligned_cols=213  Identities=10%  Similarity=0.042  Sum_probs=136.3

Q ss_pred             ccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeC----CCeEEEEeCCCC
Q psy17682        215 QRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCK----DKKMRIINPRTG  290 (490)
Q Consensus       215 ~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~  290 (490)
                      ...+..++|.++|. ++++-...+.|..|+...++....+.........++++++|+++++...    .+.+...+....
T Consensus        39 ~~~lEG~~~D~~G~-Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~  117 (319)
T d2dg1a1          39 GLQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD  117 (319)
T ss_dssp             CCCEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred             CcCcEeCEECCCCC-EEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCc
Confidence            33457899999985 7777778899999998877666655556677899999999998877643    244666666655


Q ss_pred             ceeeeeee-cCCCceeEEEEeCCCcEEEEEeCC---CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEE
Q psy17682        291 AIEEEAVC-HEGSKATRAIYLKSGLIFTTGFSK---MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLC  366 (490)
Q Consensus       291 ~~~~~~~~-~~~~~~~~~~~s~~~~~l~~~~~~---~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  366 (490)
                      ........ ........+++.++|++.++....   ...+.+..++...... ....  ......+.++|+|+++.||++
T Consensus       118 ~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~-~~~~--~~~~~pnGia~s~dg~~lyva  194 (319)
T d2dg1a1         118 NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-TPII--QNISVANGIALSTDEKVLWVT  194 (319)
T ss_dssp             SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE-EEEE--EEESSEEEEEECTTSSEEEEE
T ss_pred             eeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEeccccee-EEEe--eccceeeeeeeccccceEEEe
Confidence            54433321 222347789999999987764321   1134566666554221 1111  122345779999999998888


Q ss_pred             ecCCCeEEEEEecCCCCeeEEee-----eeeCCCceeeEEEeeCceeEEeecceeEEEEecCC-CceEEEE
Q psy17682        367 GKGDSVIRYFEITAEPPFVHYIN-----TFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNS-GLCQVVS  431 (490)
Q Consensus       367 g~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~-~~~~~i~  431 (490)
                      -+..+.|+.|++...........     .........++++.++|.+.++..+..+++.++.. +.+..|.
T Consensus       195 d~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p~G~~l~~i~  265 (319)
T d2dg1a1         195 ETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQIL  265 (319)
T ss_dssp             EGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEE
T ss_pred             cccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECCCCcEEEEEe
Confidence            88899999999875432222211     11112235689999999887776554455555543 3344443

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=7.3e-07  Score=84.56  Aligned_cols=227  Identities=8%  Similarity=0.026  Sum_probs=133.7

Q ss_pred             EECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEE---------eCCCcEEE
Q psy17682        172 AWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTA---------GSDNNVAI  242 (490)
Q Consensus       172 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~---------~~dg~v~i  242 (490)
                      .|.+++ .++. -..+|.|.+||+.+++....+..    .......+....|+||++ .++..         +..+.+.+
T Consensus        23 ~W~~~~-~~~~-~~~~g~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~SpD~~-~vl~~~~~~~~~r~s~~~~~~i   95 (465)
T d1xfda1          23 KWISDT-EFIY-REQKGTVRLWNVETNTSTVLIEG----KKIESLRAIRYEISPDRE-YALFSYNVEPIYQHSYTGYYVL   95 (465)
T ss_dssp             CBSSSS-CBCC-CCSSSCEEEBCGGGCCCEEEECT----TTTTTTTCSEEEECTTSS-EEEEEESCCCCSSSCCCSEEEE
T ss_pred             EEeCCC-cEEE-EeCCCcEEEEECCCCCEEEEEcC----ccccccccceeEECCCCC-eEEEEEcccceeEeeccccEEE
Confidence            577766 4444 35678899999988765332221    111233567788999997 44444         23567899


Q ss_pred             EECCCCeeEEEEe--cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee-ecCCC----------------c
Q psy17682        243 WNVGTGEIMIQIE--CHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV-CHEGS----------------K  303 (490)
Q Consensus       243 wd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~----------------~  303 (490)
                      +|+.+++......  .....+....|||||+.||-.. ++.|++.+..++...+... +..+.                .
T Consensus        96 ~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~  174 (465)
T d1xfda1          96 SKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKT  174 (465)
T ss_dssp             EESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSS
T ss_pred             EEccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccc
Confidence            9998876543222  2334466688999999998876 6789999988776554433 11111                1


Q ss_pred             eeEEEEeCCCcEEEEEeCC-Cc------------------------------eeEEEEecCCCCCCCeEEEec----cCC
Q psy17682        304 ATRAIYLKSGLIFTTGFSK-MS------------------------------ERQYSLRAPDHLDEPIVMVEL----DTS  348 (490)
Q Consensus       304 ~~~~~~s~~~~~l~~~~~~-~~------------------------------~~~i~iwd~~~~~~~~~~~~~----~~~  348 (490)
                      -..+.|||||+.|+...-+ ..                              ...+.++|+............    ...
T Consensus       175 ~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~  254 (465)
T d1xfda1         175 HIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMRE  254 (465)
T ss_dssp             SEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSS
T ss_pred             cceEEECCCCCeEEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCcccc
Confidence            2467799999999876411 01                              123445555433221111100    011


Q ss_pred             CceeeeeecCCCCeEEEEecCC---CeEEEEEecCCCCeeEEeeeeeCCCce----eeEEEeeCcee
Q psy17682        349 NGVMFPLYDPDTNLVYLCGKGD---SVIRYFEITAEPPFVHYINTFQTPDPQ----RGIGMMPKRGC  408 (490)
Q Consensus       349 ~~i~~~~~s~~~~~l~~~g~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~i----~~~~~sp~~~~  408 (490)
                      .-+..+.|+|+++.++.....+   ..|.++|..+++..  .+........|    ....|+|||..
T Consensus       255 ~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~--~~~~e~~~~wv~~~~~~p~~~~dg~~  319 (465)
T d1xfda1         255 YYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCT--KKHEDESEAWLHRQNEEPVFSKDGRK  319 (465)
T ss_dssp             EEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEE--EEEEEECSSCCCCCCCCCEECTTSCS
T ss_pred             ceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEE--EEEEEcCCceEeccCCceeEccCCCe
Confidence            1256788999998765444333   36778888888632  22222222222    34689999863

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.64  E-value=3.9e-05  Score=67.57  Aligned_cols=218  Identities=10%  Similarity=0.073  Sum_probs=138.5

Q ss_pred             eEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC
Q psy17682        169 LDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG  248 (490)
Q Consensus       169 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~  248 (490)
                      .+..|++.++.+..+--..+.|..||..+++.. .+.        ....+.++++.+++. +++ ++.+ .+.++|..++
T Consensus        21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~-~~~--------~~~~~~~i~~~~dg~-l~v-a~~~-gl~~~d~~tg   88 (295)
T d2ghsa1          21 EGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA--------LPFMGSALAKISDSK-QLI-ASDD-GLFLRDTATG   88 (295)
T ss_dssp             EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE--------CSSCEEEEEEEETTE-EEE-EETT-EEEEEETTTC
T ss_pred             eCCeEECCCCEEEEEECCCCEEEEEECCCCeEE-EEE--------CCCCcEEEEEecCCC-EEE-EEeC-ccEEeecccc
Confidence            456788765466666656789999998776532 221        345688999999884 544 4554 5889999888


Q ss_pred             eeEEEEec----CCCcEEEEEEcCCCCEEEEEeC----CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEe
Q psy17682        249 EIMIQIEC----HPDIVYSASWNWDGSKLLTTCK----DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       249 ~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~  320 (490)
                      +.......    ....++.+.+.|+|++.++...    .+.-.+|.+..++.........  ....++|+++++.+....
T Consensus        89 ~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~--~~Ng~~~s~d~~~l~~~d  166 (295)
T d2ghsa1          89 VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADIS--IPNSICFSPDGTTGYFVD  166 (295)
T ss_dssp             CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEES--SEEEEEECTTSCEEEEEE
T ss_pred             eeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeeccC--CcceeeecCCCceEEEee
Confidence            75433321    1235789999999997776543    2345566666665544443322  378899999988665543


Q ss_pred             CCCceeEEEEecCCCCC-----CCeEEEec-cCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCC
Q psy17682        321 SKMSERQYSLRAPDHLD-----EPIVMVEL-DTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTP  394 (490)
Q Consensus       321 ~~~~~~~i~iwd~~~~~-----~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~  394 (490)
                      .  ..+.|..+++....     ........ ........++++.+|++. ++.-..+.|..||- +++    .+..+..+
T Consensus       167 t--~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlW-va~~~~g~V~~~dp-~G~----~~~~i~lP  238 (295)
T d2ghsa1         167 T--KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIW-NARWGEGAVDRYDT-DGN----HIARYEVP  238 (295)
T ss_dssp             T--TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEE-EEEETTTEEEEECT-TCC----EEEEEECS
T ss_pred             c--ccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEE-eeeeCCCceEEecC-CCc----EeeEecCC
Confidence            2  46778888765321     11222222 223446788999999876 56556788999995 555    33333332


Q ss_pred             -CceeeEEEe-eCcee
Q psy17682        395 -DPQRGIGMM-PKRGC  408 (490)
Q Consensus       395 -~~i~~~~~s-p~~~~  408 (490)
                       ..+++++|- ||...
T Consensus       239 ~~~~T~~~FGG~d~~~  254 (295)
T d2ghsa1         239 GKQTTCPAFIGPDASR  254 (295)
T ss_dssp             CSBEEEEEEESTTSCE
T ss_pred             CCceEEEEEeCCCCCE
Confidence             468999997 56543

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.41  E-value=1.6e-05  Score=69.31  Aligned_cols=235  Identities=11%  Similarity=0.052  Sum_probs=119.6

Q ss_pred             EECCC--CCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCC-----cEEEEE
Q psy17682        172 AWSPH--DDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDN-----NVAIWN  244 (490)
Q Consensus       172 ~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-----~v~iwd  244 (490)
                      ..+|+  |+ .++-.+ +|.|.+.|+.+++..+        +..+.+.+...+|+|||+.+.++...++     .|.+++
T Consensus         5 ~~sPdi~G~-~v~f~~-~~dl~~~d~~~g~~~~--------Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~   74 (281)
T d1k32a2           5 LLNPDIHGD-RIIFVC-CDDLWEHDLKSGSTRK--------IVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYN   74 (281)
T ss_dssp             CEEEEEETT-EEEEEE-TTEEEEEETTTCCEEE--------EECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEE
T ss_pred             ccCCCCCCC-EEEEEe-CCcEEEEECCCCCEEE--------EecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEE
Confidence            35677  84 444433 4568888988776532        3336677899999999974444443332     477778


Q ss_pred             CCCCeeEEEEe------cCCCcEEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCceeeeeeecCCCceeEEEEeCC
Q psy17682        245 VGTGEIMIQIE------CHPDIVYSASWNWDGSKLLTTCKD------KKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS  312 (490)
Q Consensus       245 ~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~  312 (490)
                      ...++......      ..........|+|+|+.|+.....      ..+...+...+.....   +.. ......+.+.
T Consensus        75 ~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~  150 (281)
T d1k32a2          75 GENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPL---NLG-PATHILFADG  150 (281)
T ss_dssp             TTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEEC---CSC-SCSEEEEETT
T ss_pred             ecCCceEEeeecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEe---cCC-ccceeeecCC
Confidence            87776543221      112234678899999988876432      2345555554433221   111 1233333333


Q ss_pred             CcEEEEEeCCCce--------eEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecC--CCeEEEEEecCCC
Q psy17682        313 GLIFTTGFSKMSE--------RQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKG--DSVIRYFEITAEP  382 (490)
Q Consensus       313 ~~~l~~~~~~~~~--------~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~--dg~i~iwd~~~~~  382 (490)
                      +..+.........        ............   ...............++++.  ++.....  ...|.++|+.+++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~d~~g~~  225 (281)
T d1k32a2         151 RRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGA---FKKIVDMSTHVSSPVIVGHR--IYFITDIDGFGQIYSTDLDGKD  225 (281)
T ss_dssp             EEEEEESCSCCTTSTTCCSTTCCEEEEEEETTE---EEEEECCSSCCEEEEEETTE--EEEEECTTSSCEEEEEETTSCS
T ss_pred             CeEEEeeccccceeeeeccCCcceeeeeccccc---eeeccCCccccceeeeeccc--cceecccccccceEEEeCCCCc
Confidence            4444433211000        000011101000   11111222334455566553  3233333  3467777777665


Q ss_pred             CeeEEeeeeeCCCceeeEEEeeCceeEEee-cceeEEEEecCCCceEEEE
Q psy17682        383 PFVHYINTFQTPDPQRGIGMMPKRGCDVNS-CEIGRFFRLNNSGLCQVVS  431 (490)
Q Consensus       383 ~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~~~~~~~~~~~~~~~~i~  431 (490)
                      .  +.+...   .......|+|||+.++.. ++.+.++++.+++ .+++.
T Consensus       226 ~--~~lt~~---~~~~~~~~SpDG~~I~f~~~~~l~~~d~~~g~-~~~i~  269 (281)
T d1k32a2         226 L--RKHTSF---TDYYPRHLNTDGRRILFSKGGSIYIFNPDTEK-IEKIE  269 (281)
T ss_dssp             C--EECCCC---CSSCEEEEEESSSCEEEEETTEEEEECTTTCC-EEECC
T ss_pred             e--EEeecC---CCcccccCcCCCCEEEEEeCCEEEEEECCCCC-EEEec
Confidence            2  233221   223345799999876654 5566677777776 55553

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.33  E-value=5.8e-05  Score=67.79  Aligned_cols=242  Identities=7%  Similarity=-0.052  Sum_probs=146.4

Q ss_pred             EEEEEeCCCcEEEEECCCCCcccccccc----e----------------------eeeccc------ccCE--EEEEEe-
Q psy17682        180 VIASGSEDCVVKVWQIPDGGISRTLTEP----V----------------------VDLLYH------QRRV--GLVLWH-  224 (490)
Q Consensus       180 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~----------------------~~~~~~------~~~v--~~~~~~-  224 (490)
                      .|.||+..|.|+++-+.+++.++.+..-    .                      ..+...      .+..  -.+++. 
T Consensus        15 ~f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HHP~~S~Td   94 (459)
T d1fwxa2          15 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTE   94 (459)
T ss_dssp             EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCCEEEEEET
T ss_pred             EEeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCCCcccccC
Confidence            4677888899999988888776654310    0                      000000      0111  144453 


Q ss_pred             --eCCCCEEEEEeCCCcEEEEECCCCeeEEEEe-cCCCcEEEEEEcCC--CCEEEEEeCC------------------Ce
Q psy17682        225 --PTAQNVLLTAGSDNNVAIWNVGTGEIMIQIE-CHPDIVYSASWNWD--GSKLLTTCKD------------------KK  281 (490)
Q Consensus       225 --p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~--~~~l~~~~~d------------------g~  281 (490)
                        +||+.+++.-..+..|.+.|+++.+..+.+. .....+..+...++  -.+++..+.+                  +.
T Consensus        95 GtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~  174 (459)
T d1fwxa2          95 GKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV  174 (459)
T ss_dssp             TEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEE
T ss_pred             CccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceE
Confidence              3787566666678999999999998765443 24556777777654  4577776653                  23


Q ss_pred             EEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCc------------eeEEEEe------------------
Q psy17682        282 MRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMS------------ERQYSLR------------------  331 (490)
Q Consensus       282 i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~------------~~~i~iw------------------  331 (490)
                      +..+|..+.+..........  ...+.++++|+++++.+....            ...+.++                  
T Consensus       175 ~t~ID~~tm~V~~QV~V~g~--ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~ein  252 (459)
T d1fwxa2         175 FTAVDADKWEVAWQVLVSGN--LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN  252 (459)
T ss_dssp             EEEEETTTTEEEEEEEESSC--CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred             EEEEecCCceEEEEeeeCCC--hhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeC
Confidence            67889998887777764432  678899999998887653211            1122233                  


Q ss_pred             -----cCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC--------CeeEEeeeeeCCCcee
Q psy17682        332 -----APDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP--------PFVHYINTFQTPDPQR  398 (490)
Q Consensus       332 -----d~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~--------~~~~~~~~~~~~~~i~  398 (490)
                           |.+..........+........+.++|||++++++|..+.++.|+|++.-.        +-.........+-.-.
T Consensus       253 gV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgPL  332 (459)
T d1fwxa2         253 GVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPL  332 (459)
T ss_dssp             TEEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCEE
T ss_pred             CceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccCcCcc
Confidence                 333211111111222233456788999999999999999999999996311        1001111122233456


Q ss_pred             eEEEeeCceeEEee--cceeEEEEecC
Q psy17682        399 GIGMMPKRGCDVNS--CEIGRFFRLNN  423 (490)
Q Consensus       399 ~~~~sp~~~~l~~~--~~~~~~~~~~~  423 (490)
                      .-+|..+|....+-  ++.+--|++..
T Consensus       333 ht~fd~~g~aytslfids~v~kw~~~~  359 (459)
T d1fwxa2         333 HTAFDGRGNAYTSLFLDSQVVKWNIED  359 (459)
T ss_dssp             EEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred             ccccCCCceEEEEeeccceEEEEecch
Confidence            67888888544442  77888899753

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.28  E-value=0.00019  Score=62.07  Aligned_cols=222  Identities=9%  Similarity=-0.005  Sum_probs=112.0

Q ss_pred             CceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCC-----cEEEEECCCCCcccccccceee
Q psy17682        136 QQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDC-----VVKVWQIPDGGISRTLTEPVVD  210 (490)
Q Consensus       136 ~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~  210 (490)
                      +|.|.+.++.     .+    ..+.+..+.+.+...+|||||..+.++...++     .|.+++..+++... +......
T Consensus        20 ~~dl~~~d~~-----~g----~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~-lt~~~~~   89 (281)
T d1k32a2          20 CDDLWEHDLK-----SG----STRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKR-ITYFSGK   89 (281)
T ss_dssp             TTEEEEEETT-----TC----CEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEE-CCCCCEE
T ss_pred             CCcEEEEECC-----CC----CEEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEE-eeecCCC
Confidence            4567777775     22    22345567788899999999944444443332     36677776665433 2221111


Q ss_pred             ecccccCEEEEEEeeCCCCEEEEEeCC------CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCC-EEEEEeCCC---
Q psy17682        211 LLYHQRRVGLVLWHPTAQNVLLTAGSD------NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGS-KLLTTCKDK---  280 (490)
Q Consensus       211 ~~~~~~~v~~~~~~p~~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg---  280 (490)
                      ............|+|+++ .++.....      ..+...+...+.....   +....... +.+++. .++......   
T Consensus        90 ~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~  164 (281)
T d1k32a2          90 STGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPL---NLGPATHI-LFADGRRVIGRNTFELPHW  164 (281)
T ss_dssp             EETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEEC---CSCSCSEE-EEETTEEEEEESCSCCTTS
T ss_pred             ccCccccccccccCCCCC-EEEEEEccCCCccceeeeeecCCCceeEEe---cCCcccee-eecCCCeEEEeecccccee
Confidence            122334557889999996 55554321      2344555554443221   12222233 333443 333322211   


Q ss_pred             --------eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCcee
Q psy17682        281 --------KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVM  352 (490)
Q Consensus       281 --------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~  352 (490)
                              ................ .... ......++++..  +...+......|.++|+.+.... .+   .......
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~--~~~~~~~~~~~l~~~d~~g~~~~-~l---t~~~~~~  236 (281)
T d1k32a2         165 KGYRGGTRGKIWIEVNSGAFKKIV-DMST-HVSSPVIVGHRI--YFITDIDGFGQIYSTDLDGKDLR-KH---TSFTDYY  236 (281)
T ss_dssp             TTCCSTTCCEEEEEEETTEEEEEE-CCSS-CCEEEEEETTEE--EEEECTTSSCEEEEEETTSCSCE-EC---CCCCSSC
T ss_pred             eeeccCCcceeeeeccccceeecc-CCcc-ccceeeeecccc--ceecccccccceEEEeCCCCceE-Ee---ecCCCcc
Confidence                    1111111111111111 1111 144455565533  33333334567888898865432 11   1112233


Q ss_pred             eeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        353 FPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       353 ~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      ...|+|||+.|+.+.  ++.|+++|+.+++
T Consensus       237 ~~~~SpDG~~I~f~~--~~~l~~~d~~~g~  264 (281)
T d1k32a2         237 PRHLNTDGRRILFSK--GGSIYIFNPDTEK  264 (281)
T ss_dssp             EEEEEESSSCEEEEE--TTEEEEECTTTCC
T ss_pred             cccCcCCCCEEEEEe--CCEEEEEECCCCC
Confidence            346899999986644  6789999998886

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.16  E-value=0.0005  Score=60.19  Aligned_cols=206  Identities=8%  Similarity=-0.001  Sum_probs=125.9

Q ss_pred             EEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeee
Q psy17682        219 GLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVC  298 (490)
Q Consensus       219 ~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  298 (490)
                      .+..|++....++.+=-..+.|..||..+++.. .+. ....+.++++.++|.++++ +. ..+.++|..+++.......
T Consensus        21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~-~~~-~~~~~~~i~~~~dg~l~va-~~-~gl~~~d~~tg~~~~l~~~   96 (295)
T d2ghsa1          21 EGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIA-SD-DGLFLRDTATGVLTLHAEL   96 (295)
T ss_dssp             EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEE-ET-TEEEEEETTTCCEEEEECS
T ss_pred             eCCeEECCCCEEEEEECCCCEEEEEECCCCeEE-EEE-CCCCcEEEEEecCCCEEEE-Ee-CccEEeecccceeeEEeee
Confidence            466788765445555446788999999887643 343 4567889999988877665 44 4589999998875433221


Q ss_pred             c---CCCceeEEEEeCCCcEEEEEeCCC-ceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEE
Q psy17682        299 H---EGSKATRAIYLKSGLIFTTGFSKM-SERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIR  374 (490)
Q Consensus       299 ~---~~~~~~~~~~s~~~~~l~~~~~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~  374 (490)
                      .   ....+..+.+.|+|++.++..... ..+.-.+|.+..++.   ............++|+++++.++++-+..+.|+
T Consensus        97 ~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~---~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~  173 (295)
T d2ghsa1          97 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKV---TKLFADISIPNSICFSPDGTTGYFVDTKVNRLM  173 (295)
T ss_dssp             STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEE---EEEEEEESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred             ecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcE---EEEeeccCCcceeeecCCCceEEEeecccceee
Confidence            1   122477888999999776653211 112233444443321   111122234578899999999988888899999


Q ss_pred             EEEecCCCCe----eEEeeee-eCCCceeeEEEeeCceeEEee--cceeEEEEecCCCceEEEEE
Q psy17682        375 YFEITAEPPF----VHYINTF-QTPDPQRGIGMMPKRGCDVNS--CEIGRFFRLNNSGLCQVVSM  432 (490)
Q Consensus       375 iwd~~~~~~~----~~~~~~~-~~~~~i~~~~~sp~~~~l~~~--~~~~~~~~~~~~~~~~~i~~  432 (490)
                      .|++......    ....... .......++++..+|.+-++.  ++.+..|+. .++.+..+.+
T Consensus       174 ~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~l  237 (295)
T d2ghsa1         174 RVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV  237 (295)
T ss_dssp             EEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC
T ss_pred             EeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecC
Confidence            9988642211    0111111 123456889999999877764  444455553 3444555544

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.08  E-value=0.0023  Score=54.59  Aligned_cols=208  Identities=5%  Similarity=-0.079  Sum_probs=129.0

Q ss_pred             eeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCc
Q psy17682        160 LVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNN  239 (490)
Q Consensus       160 ~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~  239 (490)
                      .+..+...+.+++|.+.++.++.+-..++.|+..++........+       ......+.++++..-++++..+-...+.
T Consensus        30 ~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~-------~~~~~~p~~iAvD~~~~~lY~~d~~~~~  102 (263)
T d1npea_          30 FLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII-------RQDLGSPEGIALDHLGRTIFWTDSQLDR  102 (263)
T ss_dssp             EEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE-------CTTCCCEEEEEEETTTTEEEEEETTTTE
T ss_pred             ccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEE-------EeccccccEEEEeccCCeEEEeccCCCE
Confidence            344555678899999877455555566788888888655432221       1123467899998766655566666789


Q ss_pred             EEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC-C--eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEE
Q psy17682        240 VAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD-K--KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIF  316 (490)
Q Consensus       240 v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  316 (490)
                      |.+.++........+.........++++|...++...... +  .|.--++...... .+....-..+..+++.+.+..|
T Consensus       103 I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~-~i~~~~~~~P~glaiD~~~~~l  181 (263)
T d1npea_         103 IEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR-ILAQDNLGLPNGLTFDAFSSQL  181 (263)
T ss_dssp             EEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE-EEECTTCSCEEEEEEETTTTEE
T ss_pred             EEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCce-eeeeecccccceEEEeecCcEE
Confidence            9999987554433333344678999999977666654332 2  3544555543332 2322222347889999876655


Q ss_pred             EEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCC
Q psy17682        317 TTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEP  382 (490)
Q Consensus       317 ~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~  382 (490)
                      .....  ..+.|...++...........   ......+++.  +..||.+-...+.|...|..+++
T Consensus       182 Yw~d~--~~~~I~~~~~~g~~~~~v~~~---~~~P~~lav~--~~~lYwtd~~~~~I~~~~~~~g~  240 (263)
T d1npea_         182 CWVDA--GTHRAECLNPAQPGRRKVLEG---LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISK  240 (263)
T ss_dssp             EEEET--TTTEEEEEETTEEEEEEEEEC---CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTE
T ss_pred             EEEeC--CCCEEEEEECCCCCeEEEECC---CCCcEEEEEE--CCEEEEEECCCCEEEEEECCCCc
Confidence            44431  457788888875432222221   1223466664  56777887778888888888876

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=0.0037  Score=53.38  Aligned_cols=214  Identities=7%  Similarity=-0.167  Sum_probs=129.3

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEE
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAI  242 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~i  242 (490)
                      .....+.+++|++.++.+..+-..++.|.--++........   ...........+.++++.+.+.++..+-...+.|.+
T Consensus        27 ~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~---~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v  103 (266)
T d1ijqa1          27 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS---YDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSV  103 (266)
T ss_dssp             CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred             CCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcc---eEEEEeCCCCCcceEEEeeccceEEEEecCCCEEEe
Confidence            34556789999987744555545666777666643221111   111122233456788998877666666667789999


Q ss_pred             EECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEe
Q psy17682        243 WNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTC--KDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGF  320 (490)
Q Consensus       243 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~  320 (490)
                      .++........+.........++++|...++....  ..+.|.-.++...... .+....-..+..+++.+.+..|..+.
T Consensus       104 ~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~-~l~~~~~~~p~gl~iD~~~~~lYw~d  182 (266)
T d1ijqa1         104 ADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-SLVTENIQWPNGITLDLLSGRLYWVD  182 (266)
T ss_dssp             EETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE-EEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred             EecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCcee-cccccccceeeEEEeeccccEEEEec
Confidence            99986665555555567789999999665555443  3346777776644333 33322223478999998866555543


Q ss_pred             CCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682        321 SKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF  384 (490)
Q Consensus       321 ~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~  384 (490)
                      .  ..+.|...++....................+++.  +.+|+.+-..++.|...+..+++..
T Consensus       183 ~--~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~--~~~ly~td~~~~~I~~~~~~~g~~~  242 (266)
T d1ijqa1         183 S--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDV  242 (266)
T ss_dssp             T--TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCC
T ss_pred             C--CcCEEEEEECCCCCEEEEEeCCCcccccEEEEEE--CCEEEEEECCCCeEEEEECCCCcce
Confidence            2  4678888888765443333322222334556655  5677777777788888887777643

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.98  E-value=0.0037  Score=53.29  Aligned_cols=227  Identities=6%  Similarity=-0.055  Sum_probs=134.9

Q ss_pred             CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEEEecCCCcEEEEEEc
Q psy17682        188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIVYSASWN  267 (490)
Q Consensus       188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v~~~~~~  267 (490)
                      +.|+-.+++.........  ...+..+...+..++|.+..+.++.+-..++.|+..++........+......+.++++.
T Consensus        10 ~~I~~~~ld~~~~~~~~~--~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD   87 (263)
T d1npea_          10 GKIERLPLERNTMKKTEA--KAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALD   87 (263)
T ss_dssp             EEEEEEEESSSCBCGGGC--EEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEE
T ss_pred             CeEEEEECCCcccccccc--ccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEe
Confidence            477777776544332211  112223445678899998876455544566889988887655444444344678899998


Q ss_pred             CCCCEEE-EEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc
Q psy17682        268 WDGSKLL-TTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD  346 (490)
Q Consensus       268 ~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~  346 (490)
                      .-+..|. +-...+.|.+.++...... .+.......+..+++.|...++...........|..-+++.... ..+. ..
T Consensus        88 ~~~~~lY~~d~~~~~I~~~~~dg~~~~-~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~-~~i~-~~  164 (263)
T d1npea_          88 HLGRTIFWTDSQLDRIEVAKMDGTQRR-VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-RILA-QD  164 (263)
T ss_dssp             TTTTEEEEEETTTTEEEEEETTSCSCE-EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-EEEE-CT
T ss_pred             ccCCeEEEeccCCCEEEEEecCCceEE-EEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCc-eeee-ee
Confidence            7555554 5456789999998865543 33322223488999998755554332111233455455554332 2222 22


Q ss_pred             CCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEecCC
Q psy17682        347 TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRLNNS  424 (490)
Q Consensus       347 ~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~~~~  424 (490)
                      .......+++++.++.||.+-...+.|...++.... ....+...   ....++++. ++.+.++..+..+++.++..
T Consensus       165 ~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~-~~~v~~~~---~~P~~lav~-~~~lYwtd~~~~~I~~~~~~  237 (263)
T d1npea_         165 NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG-RRKVLEGL---QYPFAVTSY-GKNLYYTDWKTNSVIAMDLA  237 (263)
T ss_dssp             TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE-EEEEEECC---CSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred             cccccceEEEeecCcEEEEEeCCCCEEEEEECCCCC-eEEEECCC---CCcEEEEEE-CCEEEEEECCCCEEEEEECC
Confidence            334567899999999998887778899988887653 11222222   223577776 44555565455566666553

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.97  E-value=0.0022  Score=57.41  Aligned_cols=192  Identities=11%  Similarity=0.093  Sum_probs=123.6

Q ss_pred             CCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCC-CEEEEEeCC-----------------
Q psy17682        176 HDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQ-NVLLTAGSD-----------------  237 (490)
Q Consensus       176 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~-~~l~s~~~d-----------------  237 (490)
                      ||+.+++.-..++.|-+-|+++.++.+.+..|      ....+..+...++.+ .+++.++.+                 
T Consensus        98 DGrylFVNDkan~RVAvIdl~~fkt~kIi~iP------n~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y  171 (459)
T d1fwxa2          98 DGRFLFMNDKANTRVARVRCDVMKCDAILEIP------NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY  171 (459)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECS------SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-E
T ss_pred             ceeEEEEEcCCCceEEEEECcceeeeEEEecC------CCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhc
Confidence            67444455567889999999988875544332      344556666654322 255555542                 


Q ss_pred             -CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCC-------------------------------------
Q psy17682        238 -NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKD-------------------------------------  279 (490)
Q Consensus       238 -g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------------------------------  279 (490)
                       +.+.+.|..+.+...++.. ......++++++|+++++.+.+                                     
T Consensus       172 ~~~~t~ID~~tm~V~~QV~V-~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~e  250 (459)
T d1fwxa2         172 VNVFTAVDADKWEVAWQVLV-SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE  250 (459)
T ss_dssp             EEEEEEEETTTTEEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred             ceEEEEEecCCceEEEEeee-CCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEE
Confidence             2367789999888777763 3456689999999999887743                                     


Q ss_pred             -CeEEEEeCCCC---ceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCC---------CeEEEecc
Q psy17682        280 -KKMRIINPRTG---AIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDE---------PIVMVELD  346 (490)
Q Consensus       280 -g~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~---------~~~~~~~~  346 (490)
                       +.+.+.|.+..   ..+..+....+  ...+..+|||+++++++.  -+.++.++|++....         .....+..
T Consensus       251 ingV~VVD~~~~~~~~v~~yIPVpKs--PHGV~vSPDGKyi~VaGK--Ls~tVSViD~~Ki~~~~~~~~~~~~~~~~e~e  326 (459)
T d1fwxa2         251 LNGVKVVDGRKEASSLFTRYIPIANN--PHGCNMAPDKKHLCVAGK--LSPTVTVLDVTRFDAVFYENADPRSAVVAEPE  326 (459)
T ss_dssp             ETTEEEEECSGG--CSSEEEEEEESS--CCCEEECTTSSEEEEECT--TSSBEEEEEGGGHHHHHHSCC-GGGGEEECCB
T ss_pred             eCCceeecccccCCcceeEEEecCCC--CCceEECCCCCEEEEeCC--cCCcEEEEEehhhhhhhcccCCccccEEeecc
Confidence             12344444421   12222332222  677899999999988773  688899999864211         11222223


Q ss_pred             CCCceeeeeecCCCCeEEEEecCCCeEEEEEec
Q psy17682        347 TSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEIT  379 (490)
Q Consensus       347 ~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~  379 (490)
                      ..-+-...+|+..|. .|.+---|..|.-|++.
T Consensus       327 lglgPLht~fd~~g~-aytslfids~v~kw~~~  358 (459)
T d1fwxa2         327 LGLGPLHTAFDGRGN-AYTSLFLDSQVVKWNIE  358 (459)
T ss_dssp             CCSCEEEEEECTTSE-EEEEETTTTEEEEEEHH
T ss_pred             cCcCccccccCCCce-EEEEeeccceEEEEecc
Confidence            344567889999884 55777789999999985

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.84  E-value=0.015  Score=55.63  Aligned_cols=162  Identities=10%  Similarity=-0.010  Sum_probs=91.8

Q ss_pred             CcEEEEECCCCeeEEEEecCCCc---------EEEEEEcCCCC---EEEEEeCCCeEEEEeCCCCceeeeeeecC-----
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDI---------VYSASWNWDGS---KLLTTCKDKKMRIINPRTGAIEEEAVCHE-----  300 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~---------v~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----  300 (490)
                      ..+.-.|+++|+.+..++.....         ........+++   .++..+.+|.++++|..+++.+.......     
T Consensus       272 ~svvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~  351 (571)
T d2ad6a1         272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF  351 (571)
T ss_dssp             TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred             cceeeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccCCccccc
Confidence            45777899999999888743221         11222222443   56778899999999999998764322100     


Q ss_pred             ---------------------------------CCceeEEEEeCCCcEEEEEeCC-------------------------
Q psy17682        301 ---------------------------------GSKATRAIYLKSGLIFTTGFSK-------------------------  322 (490)
Q Consensus       301 ---------------------------------~~~~~~~~~s~~~~~l~~~~~~-------------------------  322 (490)
                                                       +..-...+++|+..++.....+                         
T Consensus       352 ~~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (571)
T d2ad6a1         352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM  431 (571)
T ss_dssp             EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred             ccccccccccccCcccccccccCceEEEeccccccccccceECCCCceEEEeccccccccccccccccCCccccccceee
Confidence                                             0001235677776655543310                         


Q ss_pred             ---------CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeC
Q psy17682        323 ---------MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQT  393 (490)
Q Consensus       323 ---------~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~  393 (490)
                               ...+.|.-+|+.+++..-....   .....+-..+-.+..+ ++|+.||.++-+|.++++    .+-++..
T Consensus       432 ~~~~~~~~~~~~G~l~AiD~~TG~~~W~~~~---~~~~~~g~l~TagglV-f~G~~dg~l~A~Da~tGe----~lW~~~l  503 (571)
T d2ad6a1         432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE---KFAAWGGTLYTKGGLV-WYATLDGYLKALDNKDGK----ELWNFKM  503 (571)
T ss_dssp             EECTTSTTSCCCEEEEEECTTTCCEEEEEEE---SSCCCSBCEEETTTEE-EEECTTSEEEEEETTTCC----EEEEEEC
T ss_pred             ccccCCcccCCcccEEEeccCCCceeeEcCC---CCCCCcceeEecCCEE-EEECCCCeEEEEECCCCc----EEEEEEC
Confidence                     0124566667666653322221   1111111122245566 468999999999999998    4444443


Q ss_pred             CCcee--eEEEeeCce
Q psy17682        394 PDPQR--GIGMMPKRG  407 (490)
Q Consensus       394 ~~~i~--~~~~sp~~~  407 (490)
                      +..+.  -+.+..||+
T Consensus       504 ~~~~~a~P~ty~~dGk  519 (571)
T d2ad6a1         504 PSGGIGSPMTYSFKGK  519 (571)
T ss_dssp             SSCCCSCCEEEEETTE
T ss_pred             CCCceecceEEEECCE
Confidence            33333  366677775

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=0.0079  Score=51.24  Aligned_cols=220  Identities=9%  Similarity=0.005  Sum_probs=128.2

Q ss_pred             CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCCe----eEEEEecCCCcEEE
Q psy17682        188 CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGE----IMIQIECHPDIVYS  263 (490)
Q Consensus       188 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~----~~~~~~~~~~~v~~  263 (490)
                      ..|+..++.+.+....+        .....+..+.|++..+.++.+=...+.|.-.++....    ....+......+..
T Consensus        10 ~~I~~~~l~~~~~~~~~--------~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~g   81 (266)
T d1ijqa1          10 HEVRKMTLDRSEYTSLI--------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG   81 (266)
T ss_dssp             SSEEEEETTSCCCEEEE--------CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred             CeEEEEECCCCcceeee--------CCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcce
Confidence            35888888765432221        1445678899998875444444456677766665321    11222223345678


Q ss_pred             EEEcCCCCEEE-EEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC-CcEEEEEeCCCceeEEEEecCCCCCCCeE
Q psy17682        264 ASWNWDGSKLL-TTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS-GLIFTTGFSKMSERQYSLRAPDHLDEPIV  341 (490)
Q Consensus       264 ~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~l~~~~~~~~~~~i~iwd~~~~~~~~~  341 (490)
                      +++.+.+..|. +-...+.|.+.++............. ..+..++.+|. |.++.+..  +..+.|...+++... ...
T Consensus        82 lAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~-~~P~~l~vd~~~g~ly~~~~--~~~~~I~r~~~dGs~-~~~  157 (266)
T d1ijqa1          82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENG-SKPRAIVVDPVHGFMYWTDW--GTPAKIKKGGLNGVD-IYS  157 (266)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTT-CCEEEEEEETTTTEEEEEEC--SSSCEEEEEETTSCC-EEE
T ss_pred             EEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCC-CCcceEEEEcccCeEEEecc--CCCcceeEeccCCCc-eec
Confidence            88887555444 44566789999998665444443333 34888999886 55555542  234567667776433 222


Q ss_pred             EEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEeeCceeEEeecceeEEEEe
Q psy17682        342 MVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMPKRGCDVNSCEIGRFFRL  421 (490)
Q Consensus       342 ~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~~~~~~~~  421 (490)
                      +.. ........+++++.++.||.+-...+.|...++..... ..............++++.. +.+.++.....+++++
T Consensus       158 l~~-~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~-~~~~~~~~~~~~p~~lav~~-~~ly~td~~~~~I~~~  234 (266)
T d1ijqa1         158 LVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSA  234 (266)
T ss_dssp             EEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEE
T ss_pred             ccc-cccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCE-EEEEeCCCcccccEEEEEEC-CEEEEEECCCCeEEEE
Confidence            221 23345688999999999988878888999999876542 22222111112345677774 4444554444455555


Q ss_pred             c
Q psy17682        422 N  422 (490)
Q Consensus       422 ~  422 (490)
                      .
T Consensus       235 ~  235 (266)
T d1ijqa1         235 N  235 (266)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.29  E-value=0.045  Score=49.03  Aligned_cols=240  Identities=10%  Similarity=0.018  Sum_probs=123.1

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCC-CcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC----
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSED-CVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD----  237 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d----  237 (490)
                      .|.....+.++.+++ .+++.|+.+ ..+.+||..+..-... ..    +. ....-.+++..+++. +++.|+.+    
T Consensus        73 ~~~~~~~~~~~~~~g-~i~v~Gg~~~~~~~~yd~~~~~w~~~-~~----~~-~~r~~~~~~~~~dG~-v~v~GG~~~~~~  144 (387)
T d1k3ia3          73 KHDMFCPGISMDGNG-QIVVTGGNDAKKTSLYDSSSDSWIPG-PD----MQ-VARGYQSSATMSDGR-VFTIGGSWSGGV  144 (387)
T ss_dssp             SCCCSSCEEEECTTS-CEEEECSSSTTCEEEEEGGGTEEEEC-CC----CS-SCCSSCEEEECTTSC-EEEECCCCCSSS
T ss_pred             CcccceeEEEEecCC-cEEEeecCCCcceeEecCccCccccc-cc----cc-ccccccceeeecCCc-eeeecccccccc
Confidence            344444566788888 788887655 5899999876543221 11    11 111223566677885 77777643    


Q ss_pred             --CcEEEEECCCCeeEEEEec----------CC-----CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee--e
Q psy17682        238 --NNVAIWNVGTGEIMIQIEC----------HP-----DIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV--C  298 (490)
Q Consensus       238 --g~v~iwd~~~~~~~~~~~~----------~~-----~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~  298 (490)
                        ..+.+||..+.+-.. +..          +.     ..-..+...++|+.++.+...+.+.++|..+........  .
T Consensus       145 ~~~~v~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  223 (387)
T d1k3ia3         145 FEKNGEVYSPSSKTWTS-LPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS  223 (387)
T ss_dssp             CCCCEEEEETTTTEEEE-ETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEE
T ss_pred             ccceeeeecCCCCceee-cCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccCcEeecccccc
Confidence              368999998765322 110          00     001112234567777777777888888887765432211  0


Q ss_pred             ----cCCC-ceeEEEE-eCCCcEEEEEeCCCc-----eeEEEEecCCCCCCC-eEEEec---cCCCceeeeeecCCCCeE
Q psy17682        299 ----HEGS-KATRAIY-LKSGLIFTTGFSKMS-----ERQYSLRAPDHLDEP-IVMVEL---DTSNGVMFPLYDPDTNLV  363 (490)
Q Consensus       299 ----~~~~-~~~~~~~-s~~~~~l~~~~~~~~-----~~~i~iwd~~~~~~~-~~~~~~---~~~~~i~~~~~s~~~~~l  363 (490)
                          +... .-..+.+ ..++++++.|+....     .....+.+....... ......   .....-......+||+.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~dg~i~  303 (387)
T d1k3ia3         224 NRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTF  303 (387)
T ss_dssp             TTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEE
T ss_pred             CcccCcccccccEEEeeccCCceEEEEeccCCCCCcccceeecccccccccCCCceeeccccccccccceeeeccCCeEE
Confidence                1110 0122222 346777777753211     112222222211111 111111   111223345556888866


Q ss_pred             EEEecCC-----------CeEEEEEecCCCCeeEEeeeeeCCCceee-EEEeeCceeEEeecc
Q psy17682        364 YLCGKGD-----------SVIRYFEITAEPPFVHYINTFQTPDPQRG-IGMMPKRGCDVNSCE  414 (490)
Q Consensus       364 ~~~g~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~i~~-~~~sp~~~~l~~~~~  414 (490)
                       +.|+.+           ..+.+||..+.+  ...+........-.+ ....+||++++.++.
T Consensus       304 -v~GG~~~~~~~~~~~~~~~ve~Ydp~~~~--W~~~~~~~~~R~~Hs~a~l~~dG~v~v~GG~  363 (387)
T d1k3ia3         304 -ITGGQRRGIPFEDSTPVFTPEIYVPEQDT--FYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  363 (387)
T ss_dssp             -EECCBSBCCTTCCCSBCCCCEEEEGGGTE--EEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             -EECCcccCccCCCCcEeceEEEEECCCCe--EEECCCCCCcccceEEEEECCCCEEEEEeCC
Confidence             666543           147889988764  223332222211123 345799999888764

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=97.17  E-value=0.046  Score=52.08  Aligned_cols=161  Identities=9%  Similarity=-0.001  Sum_probs=88.3

Q ss_pred             cEEEEECCCCeeEEEEecCCCc---------EEEEEEcCCC---CEEEEEeCCCeEEEEeCCCCceeeeeeecC------
Q psy17682        239 NVAIWNVGTGEIMIQIECHPDI---------VYSASWNWDG---SKLLTTCKDKKMRIINPRTGAIEEEAVCHE------  300 (490)
Q Consensus       239 ~v~iwd~~~~~~~~~~~~~~~~---------v~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------  300 (490)
                      .|.-.|+++++....++.....         ........++   ..++.++.+|.++++|..+++.+.......      
T Consensus       284 svvAld~~tG~~~W~~q~~~~d~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~~lDr~tGe~~~~~~~~~~~~~~~  363 (573)
T d1kb0a2         284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG  363 (573)
T ss_dssp             EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred             eEEEecccchheeecccccCcccccccccceeeecceecCCCceeeeeeccccceeEEeccccccccccccccccccccc
Confidence            4666788888887776532211         1122222233   357778889999999999998775443110      


Q ss_pred             ----------------------------CCceeEEEEeCCCcEEEEEeCC------------------------------
Q psy17682        301 ----------------------------GSKATRAIYLKSGLIFTTGFSK------------------------------  322 (490)
Q Consensus       301 ----------------------------~~~~~~~~~s~~~~~l~~~~~~------------------------------  322 (490)
                                                  +.....++++|+..++.....+                              
T Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~pg~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  443 (573)
T d1kb0a2         364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA  443 (573)
T ss_dssp             ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred             cccccceeeeeeccccccceEEeecccCCccccccccCCCcceEEeeccccceeeecccccccccCCCCccccccccccc
Confidence                                        0012234677775555543210                              


Q ss_pred             ----------CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeee
Q psy17682        323 ----------MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQ  392 (490)
Q Consensus       323 ----------~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~  392 (490)
                                ..-+.+.-||+.+++..-....   ......-..+-.|..+ ++|+.||.++.+|..+++    .+-.+.
T Consensus       444 ~~~~~~p~~~~~~G~l~AiD~~tGk~~W~~~~---~~p~~gg~lstagglV-F~G~~dg~l~A~Da~TGe----~LW~~~  515 (573)
T d1kb0a2         444 KFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH---VSPWNGGTLTTAGNVV-FQGTADGRLVAYHAATGE----KLWEAP  515 (573)
T ss_dssp             EEECSSCCCSCCEEEEEEEETTTTEEEEEEEE---SSSCCCCEEEETTTEE-EEECTTSEEEEEETTTCC----EEEEEE
T ss_pred             cccccCCCCCCCcccEEEeCCCCCceEeeecC---CCCCCCceEEEcCCEE-EEECCCCeEEEEECCCCc----EeEEEE
Confidence                      0013455555555443222221   1111111223356677 468999999999999998    444444


Q ss_pred             CCCceee--EEEeeCce
Q psy17682        393 TPDPQRG--IGMMPKRG  407 (490)
Q Consensus       393 ~~~~i~~--~~~sp~~~  407 (490)
                      .+..+.+  +.|.-+|+
T Consensus       516 ~~~~~~~~P~ty~~~Gk  532 (573)
T d1kb0a2         516 TGTGVVAAPSTYMVDGR  532 (573)
T ss_dssp             CSSCCCSCCEEEEETTE
T ss_pred             CCCCccccCEEEEECCE
Confidence            3333322  55667775

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.13  E-value=0.013  Score=52.74  Aligned_cols=157  Identities=13%  Similarity=0.092  Sum_probs=89.8

Q ss_pred             EEECCCCCCEEEEEeCCC-----------cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC-C
Q psy17682        171 IAWSPHDDNVIASGSEDC-----------VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD-N  238 (490)
Q Consensus       171 ~~~~p~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-g  238 (490)
                      .....+| ++++.|+.+.           .+.+||..+++-.....    ....|.......++.+++. +++.|+.+ .
T Consensus        25 a~~~~~g-kv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~----~~~~~~~~~~~~~~~~~g~-i~v~Gg~~~~   98 (387)
T d1k3ia3          25 AIEPTSG-RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTV----TVTKHDMFCPGISMDGNGQ-IVVTGGNDAK   98 (387)
T ss_dssp             EEETTTT-EEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEE----EECSCCCSSCEEEECTTSC-EEEECSSSTT
T ss_pred             EEEeeCC-EEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCC----CCCCcccceeEEEEecCCc-EEEeecCCCc
Confidence            3344455 7777776431           36799998876532111    0112333445667888985 77877665 6


Q ss_pred             cEEEEECCCCeeEEEEec-CCCcEEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCceeeee--e-------ecC--
Q psy17682        239 NVAIWNVGTGEIMIQIEC-HPDIVYSASWNWDGSKLLTTCKD------KKMRIINPRTGAIEEEA--V-------CHE--  300 (490)
Q Consensus       239 ~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~--~-------~~~--  300 (490)
                      .+.+||..+..-...-.. ....-...+..+||+.++.++.+      ..+.+||..+.+-...-  .       .+.  
T Consensus        99 ~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~  178 (387)
T d1k3ia3          99 KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGL  178 (387)
T ss_dssp             CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGG
T ss_pred             ceeEecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCcccccccccccce
Confidence            899999987654321111 11222456777899999988753      35899999876532110  0       000  


Q ss_pred             --CCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCC
Q psy17682        301 --GSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHL  336 (490)
Q Consensus       301 --~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~  336 (490)
                        ......+...++|+++..+.   ....+.+++..+.
T Consensus       179 ~~~~~~~~~~~~~~G~~~~~g~---~~~~~~~~~~~~~  213 (387)
T d1k3ia3         179 YRSDNHAWLFGWKKGSVFQAGP---STAMNWYYTSGSG  213 (387)
T ss_dssp             GTTTCSCCEEECGGGCEEECCS---SSEEEEEECSTTC
T ss_pred             eeccceeEEEEeCCCCEEEecC---cCCcEEecCcccC
Confidence              00011223345677777665   4667777777654

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.04  E-value=0.07  Score=44.96  Aligned_cols=234  Identities=12%  Similarity=0.110  Sum_probs=144.0

Q ss_pred             cceEEEEEeeCCCceEEEECCCCCCCCcccCCCCcceeecccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccc
Q psy17682        124 KEFKEEIRKLKSQQALSILPPPSTAPNTGRINADHALVGGHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRT  203 (490)
Q Consensus       124 ~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~  203 (490)
                      ++|.++--..+....+.+.++..    ....   .+    +.-...+.-.+|.. +.+|.-+ ..+++++|+++.+.++.
T Consensus        32 DkyicVRe~~~~~~~VvIidl~n----~~~~---~R----rpi~AdsAIMhP~~-~IiALra-g~~LQiFnletK~klks   98 (327)
T d1utca2          32 DKFICIREKVGEQAQVVIIDMND----PSNP---IR----RPISADSAIMNPAS-KVIALKA-GKTLQIFNIEMKSKMKA   98 (327)
T ss_dssp             SSEEEEEEEETTEEEEEEEETTS----TTSC---EE----EECCCSEEEECSSS-SEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred             CCEEEEEeccCCCceEEEEECCC----CCcc---ee----cccchhhhhcCCCC-cEEEEec-CCeEEEEehhHhhhhce
Confidence            56777777667778999999862    1111   11    11123345577866 6777766 45899999998877765


Q ss_pred             cccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECCCC-eeEEEEecC----CCcEEEEEEcCCCCEEEEEe-
Q psy17682        204 LTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVGTG-EIMIQIECH----PDIVYSASWNWDGSKLLTTC-  277 (490)
Q Consensus       204 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-  277 (490)
                      ..        ....|.--.|-.+.  .|+-.+ +..|+-|+++.. ++...+..|    ...|-.-..+++.+.++..+ 
T Consensus        99 ~~--------~~e~VvfWkWis~~--~L~lVT-~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI  167 (327)
T d1utca2          99 HT--------MTDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGI  167 (327)
T ss_dssp             EE--------CSSCCCEEEESSSS--EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEE
T ss_pred             EE--------cCCCcEEEEecCCC--EEEEEc-CCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeE
Confidence            44        44567777777654  566554 467999999532 466666644    35677777888888776544 


Q ss_pred             --C----CCeEEEEeCCCCceeeeeeecCCCceeEEEEeCC---CcEEEEEeCCCceeEEEEecCCCCC---CCe--EEE
Q psy17682        278 --K----DKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKS---GLIFTTGFSKMSERQYSLRAPDHLD---EPI--VMV  343 (490)
Q Consensus       278 --~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~---~~~l~~~~~~~~~~~i~iwd~~~~~---~~~--~~~  343 (490)
                        .    .|.+.+|..+.+ ..+.+.+|... ...+....+   ..+++.+......+.++|.++....   .+.  ...
T Consensus       168 ~~~~~~i~G~mQLYS~er~-~sQ~ieGhaa~-F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~v  245 (327)
T d1utca2         168 SAQQNRVVGAMQLYSVDRK-VSQPIEGHAAS-FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAV  245 (327)
T ss_dssp             EEETTEEEEEEEEEETTTT-EEEEECCSEEE-EEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEE
T ss_pred             ecCCCceeEEEEEEEeccC-cCccccceeee-eEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeE
Confidence              2    367889998754 34455566432 222222211   2345544433345789998887632   111  111


Q ss_pred             ec--cC---CCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCe
Q psy17682        344 EL--DT---SNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPF  384 (490)
Q Consensus       344 ~~--~~---~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~  384 (490)
                      ..  ..   ..--.++..|+.-..+++ -+.-|.|.+||+.++..+
T Consensus       246 di~fppea~~DFPvamqvs~kygiiyv-iTK~G~i~lyDleTgt~i  290 (327)
T d1utca2         246 DVFFPPEAQNDFPVAMQISEKHDVVFL-ITKYGYIHLYDLETGTCI  290 (327)
T ss_dssp             ECCCCTTCTTCCEEEEEEETTTTEEEE-EETTSEEEEEETTTCCEE
T ss_pred             EEECCccccCCcEEEEEeeccCCEEEE-EecCcEEEEEEcccccEE
Confidence            11  11   122456777877777754 567899999999999843

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.97  E-value=0.13  Score=47.02  Aligned_cols=113  Identities=10%  Similarity=0.096  Sum_probs=62.5

Q ss_pred             cCCeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceee-ecccccCEEEEEEeeC--CCCEEEEE-e-----
Q psy17682        165 KGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVD-LLYHQRRVGLVLWHPT--AQNVLLTA-G-----  235 (490)
Q Consensus       165 ~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~p~--~~~~l~s~-~-----  235 (490)
                      -..-++|+|.|+| +++++--.+|.|++++..++........+... ...-+.....++++|+  ...++... +     
T Consensus        26 L~~P~~la~~pdg-~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvsyt~~~~~  104 (450)
T d1crua_          26 LNKPHALLWGPDN-QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK  104 (450)
T ss_dssp             CSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred             CCCceEEEEeCCC-eEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEEEecCCCC
Confidence            3567899999998 77777655799999987776543222111111 1223467889999996  11233332 1     


Q ss_pred             -CC----Cc--EEEEECCCCe-------eE-EEEe-cCCCcEEEEEEcCCCCEEEEEeC
Q psy17682        236 -SD----NN--VAIWNVGTGE-------IM-IQIE-CHPDIVYSASWNWDGSKLLTTCK  278 (490)
Q Consensus       236 -~d----g~--v~iwd~~~~~-------~~-~~~~-~~~~~v~~~~~~~~~~~l~~~~~  278 (490)
                       .+    +.  +..+......       .+ ..+. ...+....|.|.|||.++++.+.
T Consensus       105 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H~gg~l~fgpDG~LYvs~Gd  163 (450)
T d1crua_         105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (450)
T ss_dssp             C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             CcccccccceEEEeeecccccccccceEEEeecccccccccccceeEcCCCCEEEEecC
Confidence             01    11  2333322211       11 1111 22244678999999987777653

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.85  E-value=0.16  Score=46.12  Aligned_cols=207  Identities=11%  Similarity=0.085  Sum_probs=108.5

Q ss_pred             CeeEEEECCCCCCEEEEEeCCC----cEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeC------
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDC----VVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS------  236 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~------  236 (490)
                      .+...+++|++..++++-+.+|    .|++.|+.+++.+...      +.  ......++|.++++.++.+.-.      
T Consensus       126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~------i~--~~~~~~~~W~~D~~~~~Y~~~~~~~~~~  197 (430)
T d1qfma1         126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV------LE--RVKFSCMAWTHDGKGMFYNAYPQQDGKS  197 (430)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE------EE--EECSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred             eecceEecCCCCEEEEEeccccCchheeEEeccCcceecccc------cc--cccccceEEcCCCCEEEEEEeccccCcc
Confidence            3456678999954444544444    6999999998754311      11  1112468899998745444321      


Q ss_pred             ---------CCcEEEEECCCCe--eEEEEecC--CCcEEEEEEcCCCCEEEEEeC---CCe--EEEEeCCCCce------
Q psy17682        237 ---------DNNVAIWNVGTGE--IMIQIECH--PDIVYSASWNWDGSKLLTTCK---DKK--MRIINPRTGAI------  292 (490)
Q Consensus       237 ---------dg~v~iwd~~~~~--~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~---dg~--i~iwd~~~~~~------  292 (490)
                               ...|..+.+.+..  .+..+...  ...+..+..++++++++....   +..  +.+.|+.....      
T Consensus       198 ~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~  277 (430)
T d1qfma1         198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL  277 (430)
T ss_dssp             SSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC
T ss_pred             cccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCccccccccc
Confidence                     1257788877653  22333332  334667788999998775432   233  44555443211      


Q ss_pred             -eeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCe-EEEeccCCCceeeeeecCCCCeEEEEecCC
Q psy17682        293 -EEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPI-VMVELDTSNGVMFPLYDPDTNLVYLCGKGD  370 (490)
Q Consensus       293 -~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~g~~d  370 (490)
                       ...+...... .....-+.++.+++....+...+.|...++....... ......+...+..-.++..+.+|++....+
T Consensus       278 ~~~~~~~~~~~-~~~~~~~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~~~  356 (430)
T d1qfma1         278 KWVKLIDNFEG-EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHD  356 (430)
T ss_dssp             CCEEEECSSSS-CEEEEEEETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEET
T ss_pred             ceeEeeccccc-ceEEEecCCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEEEEEEEcC
Confidence             0111111111 1222223334444444444445667666766543221 111112333344444555566775665555


Q ss_pred             C--eEEEEEecCCC
Q psy17682        371 S--VIRYFEITAEP  382 (490)
Q Consensus       371 g--~i~iwd~~~~~  382 (490)
                      +  .|++++..++.
T Consensus       357 ~~~~l~v~~~~~~~  370 (430)
T d1qfma1         357 VKNTLQLHDLATGA  370 (430)
T ss_dssp             TEEEEEEEETTTCC
T ss_pred             CEeEEEEEECCCCc
Confidence            4  67888888775

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=96.84  E-value=0.21  Score=47.20  Aligned_cols=165  Identities=10%  Similarity=0.060  Sum_probs=93.5

Q ss_pred             CcEEEEECCCCeeEEEEecCCCcE---------EEEEEcCCC---CEEEEEeCCCeEEEEeCCCCceeeeeeecC-----
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDIV---------YSASWNWDG---SKLLTTCKDKKMRIINPRTGAIEEEAVCHE-----  300 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~v---------~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----  300 (490)
                      ..|.-.|+++++.+..++...+.+         .-+....++   ..++.++.+|.++++|..+++++.......     
T Consensus       270 ~sivAld~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~  349 (560)
T d1kv9a2         270 SSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAE  349 (560)
T ss_dssp             TEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEE
T ss_pred             eeeEEecCCccceeEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCccccccccccccccc
Confidence            356777999999888776322221         112222234   356778889999999999998775443110     


Q ss_pred             ------------------------------CCceeEEEEeCCCcEEEEEeCC----------------------------
Q psy17682        301 ------------------------------GSKATRAIYLKSGLIFTTGFSK----------------------------  322 (490)
Q Consensus       301 ------------------------------~~~~~~~~~s~~~~~l~~~~~~----------------------------  322 (490)
                                                    +......+++|+..++.....+                            
T Consensus       350 ~~d~~~~~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  429 (560)
T d1kv9a2         350 KVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADAT  429 (560)
T ss_dssp             EECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCC
T ss_pred             ccChhhccccccccccccccceeeeeccccccccccccccCCCCeeecccccccceeeccccccccccccccccCccccc
Confidence                                          0001245677776655543310                            


Q ss_pred             -----CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCce
Q psy17682        323 -----MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQ  397 (490)
Q Consensus       323 -----~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i  397 (490)
                           ...+.+.-+|+.+++..-....   ......-..+-.+.++ +.|+.||.++.+|..+++    .+-.+..+..+
T Consensus       430 ~~p~~~~~G~l~A~D~~tGk~~W~~~~---~~~~~gg~l~TagglV-F~G~~dg~l~A~Da~tGe----~LW~~~l~~~~  501 (560)
T d1kv9a2         430 DVPAAVVSGALLAWDPVKQKAAWKVPY---PTHWNGGTLSTAGNLV-FQGTAAGQMHAYSADKGE----ALWQFEAQSGI  501 (560)
T ss_dssp             CCCGGGCEEEEEEEETTTTEEEEEEEE---SSSCCCCEEEETTTEE-EEECTTSEEEEEETTTCC----EEEEEECSSCC
T ss_pred             CCCCcccccceEEEeCCCCeEeeeccC---CCCCCCceeEECCCEE-EEECCCCcEEEEECCCCc----EeEEEECCCCc
Confidence                 0135666777777653322221   1112222223346676 478999999999999998    44444433333


Q ss_pred             e--eEEEeeCce-eEE
Q psy17682        398 R--GIGMMPKRG-CDV  410 (490)
Q Consensus       398 ~--~~~~sp~~~-~l~  410 (490)
                      .  -+.+.-+|+ +++
T Consensus       502 ~~~P~ty~~dGkqyv~  517 (560)
T d1kv9a2         502 VAAPMTFELAGRQYVA  517 (560)
T ss_dssp             CSCCEEEEETTEEEEE
T ss_pred             cccCEEEEECCEEEEE
Confidence            2  256667774 443

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=96.47  E-value=0.39  Score=45.57  Aligned_cols=162  Identities=14%  Similarity=0.108  Sum_probs=90.7

Q ss_pred             CcEEEEECCCCeeEEEEecCCC---------cEEEEEE-cCCC---CEEEEEeCCCeEEEEeCCCCceeeeeeecCC---
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPD---------IVYSASW-NWDG---SKLLTTCKDKKMRIINPRTGAIEEEAVCHEG---  301 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~---------~v~~~~~-~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~---  301 (490)
                      ..|.-.|+++++.+..++....         ...-+.. ..+|   +.++....+|.++++|..+++++........   
T Consensus       278 ~sivAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~~~~~~~~~  357 (596)
T d1w6sa_         278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNV  357 (596)
T ss_dssp             SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred             ccccccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeeeccccccccc
Confidence            3477789999999888763211         1112221 2344   3677788999999999999987754321000   


Q ss_pred             -----------------------------------CceeEEEEeCCCcEEEEEeCC------------------------
Q psy17682        302 -----------------------------------SKATRAIYLKSGLIFTTGFSK------------------------  322 (490)
Q Consensus       302 -----------------------------------~~~~~~~~s~~~~~l~~~~~~------------------------  322 (490)
                                                         .....++++|+..++.....+                        
T Consensus       358 ~~~~d~~~~~p~~~~~~~~~~~~~~~~i~pg~~Gg~nw~~~a~dp~~~l~yvp~~~~~~~~~~~~~~~~~g~~~~g~~~~  437 (596)
T d1w6sa_         358 FKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLN  437 (596)
T ss_dssp             EEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred             cccccccccccccCccccccCCccceeEecccccccccCccccCCCCceEEecccccccccccccccccccccccccccc
Confidence                                               001234566665544433210                        


Q ss_pred             ------------CceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeee
Q psy17682        323 ------------MSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINT  390 (490)
Q Consensus       323 ------------~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~  390 (490)
                                  ...+.|.-||+.+++..-....   ......-..+-.|..+ +.|+.||.++.+|..+++    .+-+
T Consensus       438 ~~~~~~g~~~~~~~~G~l~A~D~~TG~~~W~~~~---~~~~~gg~lsTagglV-F~G~~Dg~l~A~Da~TGe----~LW~  509 (596)
T d1w6sa_         438 MYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKME---RFAVWGGTMATAGDLV-FYGTLDGYLKARDSDTGD----LLWK  509 (596)
T ss_dssp             EEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEE---SSCCCSBCEEETTTEE-EEECTTSEEEEEETTTCC----EEEE
T ss_pred             cccCcccCcccCCCcceEEEEeCCCCceecccCC---CCCCccceeEecCCEE-EEECCCCeEEEEECCCCc----EeeE
Confidence                        0125667777776653322221   1222222233456777 469999999999999998    3433


Q ss_pred             eeCCCce--eeEEEeeCce
Q psy17682        391 FQTPDPQ--RGIGMMPKRG  407 (490)
Q Consensus       391 ~~~~~~i--~~~~~sp~~~  407 (490)
                      +.....+  .=+.+.-+|+
T Consensus       510 ~~~~~~~~a~P~tY~~dGk  528 (596)
T d1w6sa_         510 FKIPSGAIGYPMTYTHKGT  528 (596)
T ss_dssp             EECSSCCCSCCEEEEETTE
T ss_pred             EECCCCcccCCeEEEECCE
Confidence            3332222  3355666774

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.09  E-value=0.31  Score=40.93  Aligned_cols=133  Identities=11%  Similarity=0.092  Sum_probs=90.3

Q ss_pred             CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcEEE
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLIFT  317 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~  317 (490)
                      ..|.|.|+.++..+.+-..   ...+.-.+|..+.|+.-+ ..++.+||+++.+.++...-...  +.--.|-.+..+-.
T Consensus        45 ~~VvIidl~n~~~~~Rrpi---~AdsAIMhP~~~IiALra-g~~LQiFnletK~klks~~~~e~--VvfWkWis~~~L~l  118 (327)
T d1utca2          45 AQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD--VTFWKWISLNTVAL  118 (327)
T ss_dssp             EEEEEEETTSTTSCEEEEC---CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSC--CCEEEESSSSEEEE
T ss_pred             ceEEEEECCCCCcceeccc---chhhhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEcCCC--cEEEEecCCCEEEE
Confidence            4788899987653332221   122455789888887766 57899999999998888875553  55556655544333


Q ss_pred             EEeCCCceeEEEEecCCCCCCCeEEEeccC---CCceeeeeecCCCCeEEEEe------cCCCeEEEEEecCC
Q psy17682        318 TGFSKMSERQYSLRAPDHLDEPIVMVELDT---SNGVMFPLYDPDTNLVYLCG------KGDSVIRYFEITAE  381 (490)
Q Consensus       318 ~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~g------~~dg~i~iwd~~~~  381 (490)
                       -+    +..|+-|+++....|......+.   ...|..-..+++.++++++|      .-.|.+.+|..+..
T Consensus       119 -VT----~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~  186 (327)
T d1utca2         119 -VT----DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK  186 (327)
T ss_dssp             -EC----SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT
T ss_pred             -Ec----CCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC
Confidence             32    56899999977666666554332   23477778899999997776      22467889988765

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=96.01  E-value=0.42  Score=41.60  Aligned_cols=186  Identities=11%  Similarity=0.052  Sum_probs=104.6

Q ss_pred             EEEEEEeeCCCCEEEEEe------------CCCcEEEEECCCCeeE-EEE--ecC-----CCcEEEEEE--cCCCC-EEE
Q psy17682        218 VGLVLWHPTAQNVLLTAG------------SDNNVAIWNVGTGEIM-IQI--ECH-----PDIVYSASW--NWDGS-KLL  274 (490)
Q Consensus       218 v~~~~~~p~~~~~l~s~~------------~dg~v~iwd~~~~~~~-~~~--~~~-----~~~v~~~~~--~~~~~-~l~  274 (490)
                      ..++...|+|. .+++++            ..|.|.++|+.+.+.. ..+  .+.     .-....+..  .++|+ +|+
T Consensus        37 ~EDi~~~~dg~-~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~  115 (340)
T d1v04a_          37 SEDLEILPNGL-AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL  115 (340)
T ss_dssp             CCEEEECTTSE-EEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEE
T ss_pred             cceEEECCCCc-EEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEE
Confidence            34566677764 343332            1488999998765422 122  111     112344444  44665 444


Q ss_pred             EEe---CCCeEEEEeCCCCce-e---eeeeecCCCceeEEEEeCCCcEEEEEeCC--------------CceeEEEEecC
Q psy17682        275 TTC---KDKKMRIINPRTGAI-E---EEAVCHEGSKATRAIYLKSGLIFTTGFSK--------------MSERQYSLRAP  333 (490)
Q Consensus       275 ~~~---~dg~i~iwd~~~~~~-~---~~~~~~~~~~~~~~~~s~~~~~l~~~~~~--------------~~~~~i~iwd~  333 (490)
                      +..   ...+|.+|++..... +   .++....-.....++...+|.++++-...              ...+.+.-||.
T Consensus       116 vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~  195 (340)
T d1v04a_         116 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP  195 (340)
T ss_dssp             EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECS
T ss_pred             EEeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcC
Confidence            543   346788888764432 1   22222222347888888899888873210              01344555554


Q ss_pred             CCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCceeeEEEee-CceeEE
Q psy17682        334 DHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQRGIGMMP-KRGCDV  410 (490)
Q Consensus       334 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~  410 (490)
                      ..  .....   ..-...+.++++||+++|+++-+..+.|++|++...... .......-+...-.+.+.+ +|.+.+
T Consensus       196 ~~--~~~~~---~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l-~~~~~~~l~~~pDNi~~d~~~g~lwv  267 (340)
T d1v04a_         196 ND--VRVVA---EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTL-TPLRVLSFDTLVDNISVDPVTGDLWV  267 (340)
T ss_dssp             SC--EEEEE---EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCE-EEEEEEECSSEEEEEEECTTTCCEEE
T ss_pred             Cc--eEEEc---CCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCccc-ceEEEecCCCCCCccEEecCCCEEEE
Confidence            32  21111   223457889999999999999999999999999865432 2332233344556677765 444433

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=95.92  E-value=0.14  Score=44.87  Aligned_cols=151  Identities=12%  Similarity=0.092  Sum_probs=90.8

Q ss_pred             CCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEE------eCCCcEEEEEeCCC-ceeEEEEecCCCCCCCeE
Q psy17682        269 DGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIY------LKSGLIFTTGFSKM-SERQYSLRAPDHLDEPIV  341 (490)
Q Consensus       269 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~------s~~~~~l~~~~~~~-~~~~i~iwd~~~~~~~~~  341 (490)
                      +..+++.....+-|++||+. |+.+..+..  + .+..+..      ......+++++.+. ....|.+|.+........
T Consensus        39 ~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~~--G-r~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~  114 (353)
T d1h6la_          39 QNSKLITTNKKSGLAVYSLE-GKMLHSYHT--G-KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ  114 (353)
T ss_dssp             GGCEEEEEETTSCCEEEETT-CCEEEECCS--S-CEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEE
T ss_pred             CccEEEEEcCcCCEEEEcCC-CcEEEeccc--C-CcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcccccc
Confidence            44677777777779999996 776666542  1 2433332      22233455565321 123677887764322111


Q ss_pred             EEec------cCCCceeeeee--cCC-CCeEEEEecCCCeEEEEEecC---CCCeeEEeeeeeCCCceeeEEEeeCceeE
Q psy17682        342 MVEL------DTSNGVMFPLY--DPD-TNLVYLCGKGDSVIRYFEITA---EPPFVHYINTFQTPDPQRGIGMMPKRGCD  409 (490)
Q Consensus       342 ~~~~------~~~~~i~~~~~--s~~-~~~l~~~g~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~i~~~~~sp~~~~l  409 (490)
                      ....      .....+..+|+  ++. |...+++...+|.+..|.+..   +......+..+..+..+-++.+.+....|
T Consensus       115 ~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvDde~~~L  194 (353)
T d1h6la_         115 SITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAADDEYGSL  194 (353)
T ss_dssp             ECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEETTTTEE
T ss_pred             cccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEeCCCCcE
Confidence            1110      01123566666  664 555446677889999998853   22234556667777789999999988777


Q ss_pred             EeecceeEEEEecC
Q psy17682        410 VNSCEIGRFFRLNN  423 (490)
Q Consensus       410 ~~~~~~~~~~~~~~  423 (490)
                      ..+.+...+|.+..
T Consensus       195 yisEE~~Giw~~~a  208 (353)
T d1h6la_         195 YIAEEDEAIWKFSA  208 (353)
T ss_dssp             EEEETTTEEEEEES
T ss_pred             EEecCccceEEEEe
Confidence            88877778888653

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=95.39  E-value=0.11  Score=49.44  Aligned_cols=76  Identities=16%  Similarity=0.185  Sum_probs=52.2

Q ss_pred             CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL  314 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~  314 (490)
                      |.+.-||+.+++.+.+.+... +...=..+-.+.++++|+.||.++.+|.++|+.+.++....+..-.-+.|..+|+
T Consensus       457 G~l~AiD~~tGk~~W~~~~~~-p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~Gk  532 (573)
T d1kb0a2         457 GRLLAWDPVAQKAAWSVEHVS-PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGR  532 (573)
T ss_dssp             EEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             ccEEEeCCCCCceEeeecCCC-CCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCE
Confidence            357778888998888776322 1111112235778889999999999999999999988744432223355666776

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=95.38  E-value=0.75  Score=39.92  Aligned_cols=196  Identities=11%  Similarity=-0.089  Sum_probs=104.2

Q ss_pred             CeeEEEECCCCCCEEEEEeC------------CCcEEEEECCCCCccc-ccccceeeecccccCEEEEEE--eeCCCCEE
Q psy17682        167 PVLDIAWSPHDDNVIASGSE------------DCVVKVWQIPDGGISR-TLTEPVVDLLYHQRRVGLVLW--HPTAQNVL  231 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~------------dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~--~p~~~~~l  231 (490)
                      ....|...|+| ..+++++.            .|.|.++|+.+.+... .+...........-....+..  .+++..+|
T Consensus        36 G~EDi~~~~dg-~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L  114 (340)
T d1v04a_          36 GSEDLEILPNG-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL  114 (340)
T ss_dssp             CCCEEEECTTS-EEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEE
T ss_pred             CcceEEECCCC-cEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEE
Confidence            45568888987 55554432            4889999987654322 111000000001112344443  34554455


Q ss_pred             EEEe---CCCcEEEEECCCCe--e--EEEEe-cCCCcEEEEEEcCCCCEEEEEeC---------------CCeEEEEeCC
Q psy17682        232 LTAG---SDNNVAIWNVGTGE--I--MIQIE-CHPDIVYSASWNWDGSKLLTTCK---------------DKKMRIINPR  288 (490)
Q Consensus       232 ~s~~---~dg~v~iwd~~~~~--~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---------------dg~i~iwd~~  288 (490)
                      ++..   ...+|.+|++....  .  +.++. ......+++++..++.+++|-..               -++..+|...
T Consensus       115 ~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~  194 (340)
T d1v04a_         115 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS  194 (340)
T ss_dssp             EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEEC
T ss_pred             EEEeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEc
Confidence            5553   34678888875432  2  22222 22345789999989988887321               1223333333


Q ss_pred             CCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEe
Q psy17682        289 TGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCG  367 (490)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g  367 (490)
                      .++......+.  .....++++|++++|.++..  ..+.|+.|++.............-....-.+.+.+.+..+++++
T Consensus       195 ~~~~~~~~~~l--~~pNGI~~s~d~~~lyVa~t--~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva~  269 (340)
T d1v04a_         195 PNDVRVVAEGF--DFANGINISPDGKYVYIAEL--LAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC  269 (340)
T ss_dssp             SSCEEEEEEEE--SSEEEEEECTTSSEEEEEEG--GGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred             CCceEEEcCCC--CccceeEECCCCCEEEEEeC--CCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEEE
Confidence            33332222222  23889999999987766653  56789999887644333333333344466677776443333433

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=95.23  E-value=0.4  Score=45.50  Aligned_cols=156  Identities=15%  Similarity=0.082  Sum_probs=92.3

Q ss_pred             CEEEEEeCCCcEEEEECCCCeeEEEEecCCCcE-EEEEEcC--CCCEEEEEeC------CCeEEEEeCCCCceeeeeeec
Q psy17682        229 NVLLTAGSDNNVAIWNVGTGEIMIQIECHPDIV-YSASWNW--DGSKLLTTCK------DKKMRIINPRTGAIEEEAVCH  299 (490)
Q Consensus       229 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~v-~~~~~~~--~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~  299 (490)
                      .+++.++.|+.|.-.|.++++.+..+....... ..+.-.|  -+..++++..      .|.|+-+|+++++.+.++...
T Consensus       122 ~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t~  201 (596)
T d1w6sa_         122 ALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT  201 (596)
T ss_dssp             CEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred             eEEEEEeCCCCeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEeecc
Confidence            368888899999999999999998875211100 0111111  1344555543      488999999999998876421


Q ss_pred             C-------------------------------------CCceeEEEEeCCCcEEEEEeCCC-------------ceeEEE
Q psy17682        300 E-------------------------------------GSKATRAIYLKSGLIFTTGFSKM-------------SERQYS  329 (490)
Q Consensus       300 ~-------------------------------------~~~~~~~~~s~~~~~l~~~~~~~-------------~~~~i~  329 (490)
                      .                                     ......+.+.+...++..+....             ....+.
T Consensus       202 ~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~siv  281 (596)
T d1w6sa_         202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF  281 (596)
T ss_dssp             SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred             CCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeeccccccccccccccccccccccccc
Confidence            1                                     11123445666655555543221             134566


Q ss_pred             EecCCCCCCCeEEEeccCCCc-------eeeee-ecCCCC--eEEEEecCCCeEEEEEecCCCCe
Q psy17682        330 LRAPDHLDEPIVMVELDTSNG-------VMFPL-YDPDTN--LVYLCGKGDSVIRYFEITAEPPF  384 (490)
Q Consensus       330 iwd~~~~~~~~~~~~~~~~~~-------i~~~~-~s~~~~--~l~~~g~~dg~i~iwd~~~~~~~  384 (490)
                      -.|.++++..-..+..+|...       ...+. ...+|+  .+++....+|.+.++|..+++.+
T Consensus       282 AlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i  346 (596)
T d1w6sa_         282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV  346 (596)
T ss_dssp             EEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred             ccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCcee
Confidence            678888775544444433221       11111 123443  34467888999999999999843

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.22  E-value=0.13  Score=48.78  Aligned_cols=77  Identities=10%  Similarity=0.086  Sum_probs=52.1

Q ss_pred             CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCcE
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGLI  315 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  315 (490)
                      |.|.-+|+.+++.+.+.... ....+-...-.+.++++++.||.++.+|.++|+.+.++.......-.-+.|..+|+.
T Consensus       444 G~l~AiD~~TG~~~W~~~~~-~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkq  520 (571)
T d2ad6a1         444 GQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ  520 (571)
T ss_dssp             EEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred             ccEEEeccCCCceeeEcCCC-CCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEE
Confidence            45777888888888776522 111111122246688889999999999999999999887444433344666668863

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=95.07  E-value=0.056  Score=51.27  Aligned_cols=80  Identities=10%  Similarity=0.131  Sum_probs=54.8

Q ss_pred             CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc-EE
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL-IF  316 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l  316 (490)
                      |.+.-+|+.+++.+.+... ......-.+.-.+.++++++.||.++.+|.++|+.+.++.......-.-+.+..+|+ ++
T Consensus       438 G~l~A~D~~tGk~~W~~~~-~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqyv  516 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPY-PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYV  516 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred             cceEEEeCCCCeEeeeccC-CCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEE
Confidence            4678899999998887762 222222222334678889999999999999999999988854433233455666776 44


Q ss_pred             EE
Q psy17682        317 TT  318 (490)
Q Consensus       317 ~~  318 (490)
                      ++
T Consensus       517 ~v  518 (560)
T d1kv9a2         517 AI  518 (560)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=94.78  E-value=1.1  Score=38.78  Aligned_cols=129  Identities=9%  Similarity=0.060  Sum_probs=75.4

Q ss_pred             CeeEEEE--CCCCC-CEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEE
Q psy17682        167 PVLDIAW--SPHDD-NVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIW  243 (490)
Q Consensus       167 ~V~~~~~--~p~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iw  243 (490)
                      .+.++|+  +|.++ .+++....+|.+..|.+...+........+..+. -...+..+.+.+... .|+.+-++.-|..+
T Consensus       129 ~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~-~~~q~EGCVvDde~~-~LyisEE~~Giw~~  206 (353)
T d1h6la_         129 EVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFK-MNSQTEGMAADDEYG-SLYIAEEDEAIWKF  206 (353)
T ss_dssp             SCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEE-CSSCEEEEEEETTTT-EEEEEETTTEEEEE
T ss_pred             cceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccC-CCCccceEEEeCCCC-cEEEecCccceEEE
Confidence            4777777  66543 3677788899999887743221111011122222 345688999998875 78888787666666


Q ss_pred             ECCC-----CeeEEEEec--CCCcEEEEEEcC--CCC-EEEEE-eCCCeEEEEeCCCC-ceeeeee
Q psy17682        244 NVGT-----GEIMIQIEC--HPDIVYSASWNW--DGS-KLLTT-CKDKKMRIINPRTG-AIEEEAV  297 (490)
Q Consensus       244 d~~~-----~~~~~~~~~--~~~~v~~~~~~~--~~~-~l~~~-~~dg~i~iwd~~~~-~~~~~~~  297 (490)
                      ++..     +..+....+  ....+..|+.-.  ++. +|+++ -.+++..+||.... +.+..+.
T Consensus       207 ~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~~~~~g~F~  272 (353)
T d1h6la_         207 SAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQNKYVADFQ  272 (353)
T ss_dssp             ESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred             EeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCCccccceEE
Confidence            6541     223322222  355677777543  333 44444 46788999998763 4444444

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.96  E-value=0.15  Score=48.55  Aligned_cols=80  Identities=10%  Similarity=0.135  Sum_probs=56.8

Q ss_pred             CcEEEEECCCCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc-EE
Q psy17682        238 NNVAIWNVGTGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL-IF  316 (490)
Q Consensus       238 g~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l  316 (490)
                      |.|.-+|+.+++.+.+...+ .++..-..+-.+.++++|+.||.++.+|.++|+.+.++.......-.-+.|..+|+ ++
T Consensus       466 G~l~AiD~~TG~i~W~~~~~-~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~qYv  544 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYL  544 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred             CeEEEEcCCCCcEEeecCCC-CCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEE
Confidence            56788899999988887633 22222223345778888999999999999999999998854443334467778886 44


Q ss_pred             EE
Q psy17682        317 TT  318 (490)
Q Consensus       317 ~~  318 (490)
                      ++
T Consensus       545 ~i  546 (582)
T d1flga_         545 GV  546 (582)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.37  E-value=3.2  Score=36.21  Aligned_cols=176  Identities=7%  Similarity=0.019  Sum_probs=96.0

Q ss_pred             CEEEEEEeeCCCCEEEEEeCCCcEEEEECC-----------CCeeEEEEecCCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy17682        217 RVGLVLWHPTAQNVLLTAGSDNNVAIWNVG-----------TGEIMIQIECHPDIVYSASWNWDGSKLLTTCKDKKMRII  285 (490)
Q Consensus       217 ~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  285 (490)
                      ...-++.++... ++++|+.++ +.|..+.           .........  -..|..++|+-+  .++.. .++.+..+
T Consensus        38 ~~~LLAVsn~~G-Ll~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~--ip~v~~vafs~d--~l~v~-~~~~l~~~  110 (381)
T d1xipa_          38 SLQNLDISNSKS-LFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE--IPDVIFVCFHGD--QVLVS-TRNALYSL  110 (381)
T ss_dssp             CCBCEEEETTTT-EEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE--CTTEEEEEEETT--EEEEE-ESSEEEEE
T ss_pred             ccceEEEeCCCC-EEEEECCCE-EEEEEHHHHHHHhhccCCCCcceeccC--CCCeEEEEeeCC--EEEEE-eCCCEEEE
Confidence            355778888765 788888765 6676532           111112222  235889999744  45554 45678888


Q ss_pred             eCCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEE---EeccCCCceeeeeecCCCCe
Q psy17682        286 NPRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVM---VELDTSNGVMFPLYDPDTNL  362 (490)
Q Consensus       286 d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~---~~~~~~~~i~~~~~s~~~~~  362 (490)
                      +...-........... .+..+.+.|....++ .    .++.+.++++.........   ....-...+.+++|++.|..
T Consensus       111 ~~~~l~~~~~~~~~~~-~~~~~~~~p~~~~l~-~----~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq  184 (381)
T d1xipa_         111 DLEELSEFRTVTSFEK-PVFQLKNVNNTLVIL-N----SVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQ  184 (381)
T ss_dssp             ESSSTTCEEEEEECSS-CEEEEEECSSEEEEE-E----TTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSCEE
T ss_pred             Eeeccccccccccccc-cccceecCCceeEEE-e----cCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCcEE
Confidence            8876554444333333 377777777643333 2    3677888888776421111   11122355777788887777


Q ss_pred             EEEEecCCCeEEEE-EecCCCCeeEEeee-eeCCCceeeEEEeeCceeEEe
Q psy17682        363 VYLCGKGDSVIRYF-EITAEPPFVHYINT-FQTPDPQRGIGMMPKRGCDVN  411 (490)
Q Consensus       363 l~~~g~~dg~i~iw-d~~~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~  411 (490)
                      + +++..++ ..+- ++....    .+.. ......+.++.|..+..+++.
T Consensus       185 ~-v~~~g~~-~q~k~~i~~~~----~~~~p~~~~~~v~sI~WL~~~~F~vv  229 (381)
T d1xipa_         185 S-FAWRNGE-MEKQFEFSLPS----ELEELPVEEYSPLSVTILSPQDFLAV  229 (381)
T ss_dssp             E-EEEETTE-EEEEEEECCCH----HHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             E-EEeCCCc-eeeccCCCCcc----ccCCCcCCCcceeEEEEecCceEEEE
Confidence            7 4453221 2211 111110    1110 112345788899888777664

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.60  E-value=4.3  Score=36.10  Aligned_cols=264  Identities=11%  Similarity=-0.024  Sum_probs=120.1

Q ss_pred             cccceeeeEEeccCCCceEEeeeCCC----eEEEEeCCCCCCCCCCCccccceeccccceeecccCCCCCcccccCCeeE
Q psy17682         42 YHQRRVGLVLWHPTAQNVLLTAGKEA----EPILISLKDGYIPPSEKSKSALKVTKRSNVLDKVGGKGGANRNSTANEIT  117 (490)
Q Consensus        42 gH~~~V~~v~~~p~~~~~l~s~~~D~----~v~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  117 (490)
                      ++.-.+..++++|++..++++-+.+|    .+++.|+.+++...              ..+.          ......++
T Consensus       122 ~~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~--------------~~i~----------~~~~~~~~  177 (430)
T d1qfma1         122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELP--------------DVLE----------RVKFSCMA  177 (430)
T ss_dssp             SSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEE--------------EEEE----------EECSCCEE
T ss_pred             cccceecceEecCCCCEEEEEeccccCchheeEEeccCcceecc--------------cccc----------cccccceE
Confidence            44445667789999966665655444    78999999976211              0000          00123566


Q ss_pred             eccccccceEEEEE-----------eeCCCceEEEECCCCCCCCcccCCCCcceeeccc--CCeeEEEECCCCCCEEEEE
Q psy17682        118 ISEDYVKEFKEEIR-----------KLKSQQALSILPPPSTAPNTGRINADHALVGGHK--GPVLDIAWSPHDDNVIASG  184 (490)
Q Consensus       118 ~s~~~~~~~~~~~~-----------~~~~~g~i~v~~~~~~~~~~~~~~~~~~~~~~h~--~~V~~~~~~p~~~~~l~s~  184 (490)
                      |+++...-+-....           .......+..+.+...    .  ......+....  ..+..+..++++..++++.
T Consensus       178 W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~~~~v~~h~lgt~----~--~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~  251 (430)
T d1qfma1         178 WTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTD----Q--SEDILCAEFPDEPKWMGGAELSDDGRYVLLSI  251 (430)
T ss_dssp             ECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSC----G--GGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred             EcCCCCEEEEEEeccccCcccccccccCCcceEEEEECCCC----c--cccccccccccCCceEEeeeccCCcceeeEEe
Confidence            76664211111000           0111224555555311    0  11122333322  3466778888884333333


Q ss_pred             e--CCCcEEEE--ECCCCCcc-cccccceeeecccccCEEEEEEeeCCCCEEEEEeC---CCcEEEEECCCCee--EEE-
Q psy17682        185 S--EDCVVKVW--QIPDGGIS-RTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGS---DNNVAIWNVGTGEI--MIQ-  253 (490)
Q Consensus       185 ~--~dg~i~iw--d~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~---dg~v~iwd~~~~~~--~~~-  253 (490)
                      .  .+....+|  ++...... .................. ..-+..+ .+++....   ++.|...++.....  ... 
T Consensus       252 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~v  329 (430)
T d1qfma1         252 REGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGT-VFTFKTNRHSPNYRLINIDFTDPEESKWKVL  329 (430)
T ss_dssp             ECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETT-EEEEEECTTCTTCEEEEEETTBCCGGGCEEE
T ss_pred             eccCCccEEEEEeeCCCcccccccccceeEeecccccceE-EEecCCc-eeecccCcccccceeEEecCCCCccccceEE
Confidence            2  23344455  44322111 110011111111222222 2223333 23333322   35666677664421  223 


Q ss_pred             EecCCCcEEEEEEcCCCCEEEEE-eCCC--eEEEEeCCCCceeeeeeecCCCceeEEEEeCCCc-EEEEEeCCCceeEEE
Q psy17682        254 IECHPDIVYSASWNWDGSKLLTT-CKDK--KMRIINPRTGAIEEEAVCHEGSKATRAIYLKSGL-IFTTGFSKMSERQYS  329 (490)
Q Consensus       254 ~~~~~~~v~~~~~~~~~~~l~~~-~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~~~~~~~~~~i~  329 (490)
                      +..+...+..-.+...+.+|+.. ..++  .|++++..++..........+ .+..+...++.. +...-++-..-..+.
T Consensus       330 i~~~~~~~~~~~~~~~~~~lvl~~~~~~~~~l~v~~~~~~~~~~~~~~~~~-sv~~~~~~~~~~~~~~~~ss~~tP~~~y  408 (430)
T d1qfma1         330 VPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVG-SVVGYSGQKKDTEIFYQFTSFLSPGIIY  408 (430)
T ss_dssp             ECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSS-EEEEEECCTTCSEEEEEEECSSCCCEEE
T ss_pred             ecccCcceeeeEEEEECCEEEEEEEcCCEeEEEEEECCCCcEEEecCCCCc-eEeeccCCCCCCEEEEEEcCCCCCCeEE
Confidence            33344445444444445556554 4554  488999988876544333222 244333334433 333222222346788


Q ss_pred             EecCCCCCC
Q psy17682        330 LRAPDHLDE  338 (490)
Q Consensus       330 iwd~~~~~~  338 (490)
                      -+|+.+++.
T Consensus       409 ~~Dl~t~~~  417 (430)
T d1qfma1         409 HCDLTKEEL  417 (430)
T ss_dssp             EEETTSSSC
T ss_pred             EEECCCCCc
Confidence            888887653

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=91.45  E-value=2.5  Score=33.15  Aligned_cols=145  Identities=16%  Similarity=0.226  Sum_probs=81.3

Q ss_pred             EEEEEEeeCCCCEEEEEeCCCcEEEEECCCCeeEEE--Eec-------CCCcEEEEEE-cCCCCEEEEEeC-CCeEEEEe
Q psy17682        218 VGLVLWHPTAQNVLLTAGSDNNVAIWNVGTGEIMIQ--IEC-------HPDIVYSASW-NWDGSKLLTTCK-DKKMRIIN  286 (490)
Q Consensus       218 v~~~~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~--~~~-------~~~~v~~~~~-~~~~~~l~~~~~-dg~i~iwd  286 (490)
                      +.-+...-+++++.++|+......+|-++.|+....  +.+       ...-|..+.+ .++.+-++++.- .|.++|++
T Consensus       104 vRI~S~~yddk~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~lri~t  183 (313)
T d2hu7a1         104 MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFD  183 (313)
T ss_dssp             BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTEEEEEEC
T ss_pred             EEEEEeeecCceEEEecccCCceEEEEEeCCceeeeccCCCcceEEeccCCeEEEEeeecCCcceEEEEecccCCEEEec
Confidence            444445556667999999988899999888764332  221       1222333333 223333444444 56666666


Q ss_pred             CCCCceeeeeeecCCCceeEEEEeCCCcEEEEEeCCCceeEEEEecCCCCCCCeEEEecc-------CCCceeeeeecCC
Q psy17682        287 PRTGAIEEEAVCHEGSKATRAIYLKSGLIFTTGFSKMSERQYSLRAPDHLDEPIVMVELD-------TSNGVMFPLYDPD  359 (490)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~i~iwd~~~~~~~~~~~~~~-------~~~~i~~~~~s~~  359 (490)
                      ...+.            ++...+.+..+. +++........+.-+|++.+.-  ...++.       ....|+-+-+.|+
T Consensus       184 pkeGS------------~~~ay~~~gnKV-~sdyEt~gEsywit~D~~s~~y--erve~P~kd~~sy~p~~I~~~~Y~Pd  248 (313)
T d2hu7a1         184 SGEGS------------FSSASISPGMKV-TAGLETAREARLVTVDPRDGSV--EDLELPSKDFSSYRPTAITWLGYLPD  248 (313)
T ss_dssp             CSSEE------------EEEEEECTTSCE-EEEEEESSCEEEEEECTTTCCE--EECCCSSCHHHHHCCSEEEEEEECTT
T ss_pred             CCCCc------------ccceeEccCcee-eeccCCCCceEEEEEecccCce--eeeecCcccceeecceEEEeeeeCCC
Confidence            55443            444444454444 4444322333444557775431  111111       1234666779999


Q ss_pred             CCeEEEEecCCCeEEEEEe
Q psy17682        360 TNLVYLCGKGDSVIRYFEI  378 (490)
Q Consensus       360 ~~~l~~~g~~dg~i~iwd~  378 (490)
                      ++.+ +.+-.||.-++|.-
T Consensus       249 d~L~-iiakrdG~s~lF~n  266 (313)
T d2hu7a1         249 GRLA-VVARREGRSAVFID  266 (313)
T ss_dssp             SCEE-EEEEETTEEEEEET
T ss_pred             CcEE-EEEecCCchheeec
Confidence            9997 56678999888864

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=91.07  E-value=5.1  Score=35.93  Aligned_cols=56  Identities=14%  Similarity=0.161  Sum_probs=38.9

Q ss_pred             CCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeeeee-------ecCCCceeEEEEeCC
Q psy17682        257 HPDIVYSASWNWDGSKLLTTCKDKKMRIINPRTGAIEEEAV-------CHEGSKATRAIYLKS  312 (490)
Q Consensus       257 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~s~~  312 (490)
                      .-...++|+|.|+++++++--..|.|++++..+++......       .....-...++++|+
T Consensus        25 ~L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          25 NLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            34567899999999988876557999999988775433221       111122678999986

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.55  E-value=14  Score=34.18  Aligned_cols=77  Identities=17%  Similarity=0.065  Sum_probs=46.1

Q ss_pred             eEEEEecCCCCCCCeEEEeccCCCceeeeeecCCCCeEEEEecCCCeEEEEEecCCCCeeEEeeeeeCCCce--eeEEEe
Q psy17682        326 RQYSLRAPDHLDEPIVMVELDTSNGVMFPLYDPDTNLVYLCGKGDSVIRYFEITAEPPFVHYINTFQTPDPQ--RGIGMM  403 (490)
Q Consensus       326 ~~i~iwd~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~i--~~~~~s  403 (490)
                      +.+.-+|+.+++..-....   ...+..-..+..|..+ ++|+.||.++-+|.++++    .+-++..+..+  .-+.+.
T Consensus       466 G~l~AiD~~TG~i~W~~~~---~~p~~~g~lstagglV-F~Gt~dg~l~A~Da~TGe----~LW~~~~~~~~~~~P~ty~  537 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKE---HLPLWAGVLATAGNLV-FTGTGDGYFKAFDAKSGK----ELWKFQTGSGIVSPPITWE  537 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEE---SSCCCSCCEEETTTEE-EEECTTSEEEEEETTTCC----EEEEEECSSCCCSCCEEEE
T ss_pred             CeEEEEcCCCCcEEeecCC---CCCCccceeEEcCCeE-EEeCCCCeEEEEECCCCc----EeEEEECCCCccccCEEEE
Confidence            5677777777654333222   1222322334466777 468999999999999999    44444433232  226677


Q ss_pred             eCce-eEE
Q psy17682        404 PKRG-CDV  410 (490)
Q Consensus       404 p~~~-~l~  410 (490)
                      .+|+ +++
T Consensus       538 ~~G~qYv~  545 (582)
T d1flga_         538 QDGEQYLG  545 (582)
T ss_dssp             ETTEEEEE
T ss_pred             ECCEEEEE
Confidence            8884 443

>d2ebsa1 b.69.13.1 (A:4-430) Oligoxyloglucan reducing end-specific cellobiohydrolase {Yeast (Geotrichum sp. M128) [TaxId: 203496]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Oligoxyloglucan reducing end-specific cellobiohydrolase
family: Oligoxyloglucan reducing end-specific cellobiohydrolase
domain: Oligoxyloglucan reducing end-specific cellobiohydrolase
species: Yeast (Geotrichum sp. M128) [TaxId: 203496]

Probab=83.85  E-value=8.5  Score=33.86  Aligned_cols=147  Identities=10%  Similarity=0.045  Sum_probs=78.4

Q ss_pred             cccCCeeEEEECCCCCCEEEEEeCCCcEEEEECCC-CCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCC----
Q psy17682        163 GHKGPVLDIAWSPHDDNVIASGSEDCVVKVWQIPD-GGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSD----  237 (490)
Q Consensus       163 ~h~~~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d----  237 (490)
                      +-.+.|.+|+++|.+.+++.+++..|-|  |...+ ++.-..+.............+.+|+++|..++.+..+..+    
T Consensus         9 ~~gg~~~~i~~~P~~~~~~ya~~~~gGv--~~S~dgG~tW~~~~~~~~~~~~~~~~~~~iavdp~np~~vy~~tg~~~~~   86 (427)
T d2ebsa1           9 GGGGYITGIVAHPKTKDLLYARTDIGGA--YRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGD   86 (427)
T ss_dssp             CBCSCEEEEEECSSSTTCEEEEESSSCE--EEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTS
T ss_pred             CCCCcEEEEEECCCCCCEEEEEecCCCE--EEEECCCCceEECCCCCCCCCcccccEeEEEECCCCCCEEEEEeccccCC
Confidence            3467899999999988888888876655  43333 3322222111111112344688999999876667665432    


Q ss_pred             CcEEEEECC-CCeeEEEEec---------CCCcEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeeeee-----ecCC
Q psy17682        238 NNVAIWNVG-TGEIMIQIEC---------HPDIVYSASWNWD-GSKLLTTCKDKKMRIINPRTGAIEEEAV-----CHEG  301 (490)
Q Consensus       238 g~v~iwd~~-~~~~~~~~~~---------~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~~~~  301 (490)
                      ....||.-. .|+.-..+..         .......++++|. ...+.+++.++.|.. ....++.-....     ....
T Consensus        87 ~~~gi~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~i~v~P~~~~~v~~~~~~~gl~~-S~D~G~tW~~~~~~~~~~~~~  165 (427)
T d2ebsa1          87 EWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAFTNG  165 (427)
T ss_dssp             SCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEECTTCTTCEEEECSSSCEEE-ESSTTSSCEECTTSSCCCCSS
T ss_pred             cCccEEEeCCCCccceeecCCcccCccccCccceeEEEECCCccCcccccccccceee-ecCCCceeeecccCcccccCC
Confidence            123455433 3443333321         1233557889995 456666666555432 333333222111     1111


Q ss_pred             CceeEEEEeCC
Q psy17682        302 SKATRAIYLKS  312 (490)
Q Consensus       302 ~~~~~~~~s~~  312 (490)
                      ..+..+.++|.
T Consensus       166 ~~~~~i~~~p~  176 (427)
T d2ebsa1         166 IGYTSVIFDPE  176 (427)
T ss_dssp             SCEEEEEECTT
T ss_pred             ccceEEEeccc
Confidence            22677888876

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.83  E-value=9.8  Score=30.98  Aligned_cols=11  Identities=9%  Similarity=0.374  Sum_probs=8.4

Q ss_pred             cEEEEECCCCC
Q psy17682        189 VVKVWQIPDGG  199 (490)
Q Consensus       189 ~i~iwd~~~~~  199 (490)
                      .+.+||..+++
T Consensus        20 ~~~~yd~~t~~   30 (288)
T d1zgka1          20 YLEAYNPSNGT   30 (288)
T ss_dssp             CEEEEETTTTE
T ss_pred             eEEEEECCCCe
Confidence            57789988765

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.62  E-value=13  Score=32.18  Aligned_cols=135  Identities=9%  Similarity=-0.036  Sum_probs=76.3

Q ss_pred             CeeEEEECCCCCCEEEEEeCCCcEEEEECCCCCcccccccceeeecccccCEEEEEEeeCCCCEEEEEeCCCcEEEEECC
Q psy17682        167 PVLDIAWSPHDDNVIASGSEDCVVKVWQIPDGGISRTLTEPVVDLLYHQRRVGLVLWHPTAQNVLLTAGSDNNVAIWNVG  246 (490)
Q Consensus       167 ~V~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~v~iwd~~  246 (490)
                      .|..++|+.   ..|+... ++.+..++...-......       ..-..++..+.++|.   .++....++.+.++++.
T Consensus        88 ~v~~vafs~---d~l~v~~-~~~l~~~~~~~l~~~~~~-------~~~~~~~~~~~~~p~---~~~l~~~~~~~~~~~l~  153 (381)
T d1xipa_          88 DVIFVCFHG---DQVLVST-RNALYSLDLEELSEFRTV-------TSFEKPVFQLKNVNN---TLVILNSVNDLSALDLR  153 (381)
T ss_dssp             TEEEEEEET---TEEEEEE-SSEEEEEESSSTTCEEEE-------EECSSCEEEEEECSS---EEEEEETTSEEEEEETT
T ss_pred             CeEEEEeeC---CEEEEEe-CCCEEEEEeecccccccc-------ccccccccceecCCc---eeEEEecCCCEEEEEec
Confidence            588899974   3444443 456778877554322221       113456788888875   45666678999999998


Q ss_pred             CCeeEEEEe-----cCCCcEEEEEEcCCCCEEEEEeCCCeEEEE-eCCCCceeeeeee--cCCCceeEEEEeCCCcEEEE
Q psy17682        247 TGEIMIQIE-----CHPDIVYSASWNWDGSKLLTTCKDKKMRII-NPRTGAIEEEAVC--HEGSKATRAIYLKSGLIFTT  318 (490)
Q Consensus       247 ~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw-d~~~~~~~~~~~~--~~~~~~~~~~~s~~~~~l~~  318 (490)
                      +++......     .-.+.+.+++|++.|..++++..+. ..+- ++....   .+..  .....+.++.|-.+..++++
T Consensus       154 ~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~~~g~~-~q~k~~i~~~~---~~~~p~~~~~~v~sI~WL~~~~F~vv  229 (381)
T d1xipa_         154 TKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGE-MEKQFEFSLPS---ELEELPVEEYSPLSVTILSPQDFLAV  229 (381)
T ss_dssp             TCCEEEEEESEEEEEECSSEEEEEETTSCEEEEEEETTE-EEEEEEECCCH---HHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             cCccccccCCcceEEecCCceEEEEeCCcEEEEEeCCCc-eeeccCCCCcc---ccCCCcCCCcceeEEEEecCceEEEE
Confidence            876432211     1235678888888887777764322 1111 111111   0111  01224778888877666654


Q ss_pred             E
Q psy17682        319 G  319 (490)
Q Consensus       319 ~  319 (490)
                      -
T Consensus       230 y  230 (381)
T d1xipa_         230 F  230 (381)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d2ebsa1 b.69.13.1 (A:4-430) Oligoxyloglucan reducing end-specific cellobiohydrolase {Yeast (Geotrichum sp. M128) [TaxId: 203496]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Oligoxyloglucan reducing end-specific cellobiohydrolase
family: Oligoxyloglucan reducing end-specific cellobiohydrolase
domain: Oligoxyloglucan reducing end-specific cellobiohydrolase
species: Yeast (Geotrichum sp. M128) [TaxId: 203496]

Probab=80.35  E-value=12  Score=32.76  Aligned_cols=28  Identities=11%  Similarity=0.124  Sum_probs=22.7

Q ss_pred             cccceeeeEEeccCCCceEEeeeCCCeE
Q psy17682         42 YHQRRVGLVLWHPTAQNVLLTAGKEAEP   69 (490)
Q Consensus        42 gH~~~V~~v~~~p~~~~~l~s~~~D~~v   69 (490)
                      |-.+.|.+|+++|..+.++..++..|-|
T Consensus         9 ~~gg~~~~i~~~P~~~~~~ya~~~~gGv   36 (427)
T d2ebsa1           9 GGGGYITGIVAHPKTKDLLYARTDIGGA   36 (427)
T ss_dssp             CBCSCEEEEEECSSSTTCEEEEESSSCE
T ss_pred             CCCCcEEEEEECCCCCCEEEEEecCCCE
Confidence            4467899999999998888888876653