Psyllid ID: psy17685

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
Protein Sequence
MNWCTMTIALLHHALNFLSLPVDFLLGFLYFRGSIFFEPFRPNLNRDLLFAGIRHDDYDYGEVNQLLERSLKSFIKTTACYPERMTSEEYNNVLKEFHHSEKSQLYSDDTFLQKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVNEELDSLTDSKNKLSDKKTSSNLTKKSVKRPGNV
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHccccccEEEcccccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHcccccEEccccccccccHHHHHHHHHHHccccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHcccccccHHHHHHHHHHHHHccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHcccHHHHHHHEEEccccccccccccHHHHHHHEccEcccccccHccHHccccccEEEEEEEEccccccHHHHHHHHHHccccHHHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcHHcccHHHHHHHHHHHHHHcccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHcccccccccccccccccc
Coil and Loop (DISEMBL)
MNWCTMTIALLHHALNFLSLPVDFLLGFLyfrgsiffepfrpnlnrdllfagirhddydygeVNQLLERSLKSFIKttacypermtseEYNNVLKEFhhseksqlysddtFLQKLDHVTQVMGYHPTYLNIFLRTqnyimrgdgplsyeYRHYIAIMAAGRHQCSYLINLqkeeflsqggdqdwlkglsyapkklGLLYEVNKILahrpwllnpshlqkltkngwsLGELCHALVLLVNFHSLASFVFACGvneeldsltdsknklsdkktssnltkksvkrpgnv
Flexible Loop (DISEMBL)
MNWCTMTIALLHHALNFLSLPVDFLLGFLYFRGSIFFEPFRPNLNRDLLFAGIRHDDYDYGEVNQLLERSLKSFIKTTACYPERMTSEEYNNVLKEFHHSEKSQLYSDDTFLQKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVNEELdsltdsknklsdkktssnltkksvkrpgnv
Low Complexity Region (SEG)
MNWCTMTIALLHHALNFLSLPVDFLLGFLYFRGSIFFEPFRPNLNRDLLFAGIRHDDYDYGEVNQLLERSLKSFIKTTACYPERMTSEEYNNVLKEFHHSEKSQLYSDDTFLQKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVNEELDSLTDSKNKLSDKKTSSNLTKKSVKRPGNV
Disordered region (IsUnstruct)
**WCTMTIALLHHALNFLSLPVDFLLGFLYFRGSIFFEPFRPNLNRDLLFAGIRHDDYDYGEVNQLLERSLKSFIKTTACYPERMTSEEYNNVLKEFHHSEKSQLYSDDTFLQKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVNE********************************
Disordered Region (DISOPRED)
****TMTIALLHHALNFLSLPVDFLLGFLYFRGSIFFEPFRPNLNRDLLFAGIRHDDYDYGEVNQLLERSLKSFIKTTACYPERMTSEEYNNVLKEFHHSEKSQLYSDDTFLQKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVNEELD*****************************
Disordered Region (DISEMBL)
MNWCTMTIALLHHALNFLSLPVDFLLGFLYFRGSIFFEPFRPNLNRDLLFAGIRHDDYDYGEVNQLLERSLKSFIKTTACYPERMTSEEYNNVLKEFHHSEKSQLYSDDTFLQKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVNEELDSL***************************
Disordered Region (DISPRO)
MNWCTMTIALLHHALNFLSLPVDFLLGFLYFRGSIFFEPFRPNLNRDLLFAGIRHDDYDYGEVNQLLERSLKSFIKTTACYPERMTSEEYNNVLKEFHHSEKSQLYSDDTFLQKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVNE********************************
Transmembrane Helix (TMHMM)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNWCTMTIALLHHALNFLSLPVDFLLGFLYFRGSIFFEPFRPNLNRDLLFAGIRHDDYDYGEVNQLLERSLKSFIKTTACYPERMTSEEYNNVLKEFHHSEKSQLYSDDTFLQKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVNEELDSLTDSKNKLSDKKTSSNLTKKSVKRPGNV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	286	2.2.26 [Sep-21-2011]
Q9W1K5	497	Sestrin homolog OS=Drosop	yes	N/A	0.538	0.309	0.576	8e-51
P58005	492	Sestrin-3 OS=Homo sapiens	yes	N/A	0.639	0.371	0.494	2e-48
Q9CYP7	492	Sestrin-3 OS=Mus musculus	yes	N/A	0.639	0.371	0.489	2e-47
P58003	481	Sestrin-1 OS=Xenopus laev	N/A	N/A	0.555	0.330	0.554	2e-46
Q4R6P7	492	Sestrin-1 OS=Macaca fasci	N/A	N/A	0.548	0.319	0.542	2e-45
P58006	492	Sestrin-1 OS=Mus musculus	no	N/A	0.548	0.319	0.542	2e-45
Q9Y6P5	492	Sestrin-1 OS=Homo sapiens	no	N/A	0.548	0.319	0.542	2e-45
P58043	480	Sestrin-2 OS=Mus musculus	no	N/A	0.506	0.302	0.560	2e-41
Q58CN8	471	Sestrin-2 OS=Bos taurus G	no	N/A	0.503	0.305	0.551	2e-40
P58004	480	Sestrin-2 OS=Homo sapiens	no	N/A	0.506	0.302	0.540	2e-40

>sp|Q9W1K5|SESN_DROME Sestrin homolog OS=Drosophila melanogaster GN=Sesn PE=1 SV=2

 Score =  200 bits (509), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 90/156 (57%), Positives = 120/156 (76%), Gaps = 2/156 (1%)

Query: 112 LQKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQ 171
           L  LD VTQV+GYHP + + FL TQN+IM+GDGPL  +YR+Y+AI+AA RHQC YL+   
Sbjct: 34  LDDLDQVTQVIGYHPQFHDHFLATQNFIMKGDGPLPNDYRYYLAIIAAARHQCPYLVKRY 93

Query: 172 KEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLT--KNGWSLGE 229
           ++EF++QGGD  WL GL + P KL  +Y++NKILAHRPWLL   H+++LT  KN WSL E
Sbjct: 94  EKEFINQGGDSAWLGGLDFIPAKLRAIYDINKILAHRPWLLRKEHIERLTKGKNSWSLSE 153

Query: 230 LCHALVLLVNFHSLASFVFACGVNEELDSLTDSKNK 265
           + HA+VLL +FHSL+SFVF+CG+ ++LD L+  K K
Sbjct: 154 VVHAMVLLSHFHSLSSFVFSCGLTQKLDGLSSPKLK 189

Drosophila melanogaster (taxid: 7227)

>sp|P58005|SESN3_HUMAN Sestrin-3 OS=Homo sapiens GN=SESN3 PE=2 SV=2

 Score =  192 bits (489), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 98/198 (49%), Positives = 124/198 (62%), Gaps = 15/198 (7%)

Query: 63  VNQLLERSLKSFIKTTACYPERMTSEEYNNVLKEFHHSEKSQLYSDDTFLQKLDHVTQVM 122
           V+Q L R   +FI            E  N +++E+  S             +LD++TQVM
Sbjct: 32  VSQPLTRGPSAFIPEKEVVQANTVDERTNFLVEEYSTS------------GRLDNITQVM 79

Query: 123 GYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQ 182
             H  YL  FLR+Q Y++R DGPL   YRHYIAIMAA RHQCSYLIN+  +EFL  GG  
Sbjct: 80  SLHTQYLESFLRSQFYMLRMDGPLPLPYRHYIAIMAAARHQCSYLINMHVDEFLKTGGIA 139

Query: 183 DWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNG---WSLGELCHALVLLVN 239
           +WL GL Y P++L  L E+NK+LAHRPWL+   H+QKL K G   WSL EL HA+VLL +
Sbjct: 140 EWLNGLEYVPQRLKNLNEINKLLAHRPWLITKEHIQKLVKTGENNWSLPELVHAVVLLAH 199

Query: 240 FHSLASFVFACGVNEELD 257
           +H+LASFVF  G+N E D
Sbjct: 200 YHALASFVFGSGINPERD 217

Homo sapiens (taxid: 9606)

>sp|Q9CYP7|SESN3_MOUSE Sestrin-3 OS=Mus musculus GN=Sesn3 PE=2 SV=1

 Score =  189 bits (480), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 97/198 (48%), Positives = 123/198 (62%), Gaps = 15/198 (7%)

Query: 63  VNQLLERSLKSFIKTTACYPERMTSEEYNNVLKEFHHSEKSQLYSDDTFLQKLDHVTQVM 122
           V+Q L R   +FI            E  N +++E+  S             +LD++TQVM
Sbjct: 32  VSQPLTRGPSAFIPEKEVVQANTADERTNFLVEEYSTS------------GRLDNITQVM 79

Query: 123 GYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQ 182
             H  YL  FLR+Q Y++R DGPL    RHYIAIMAA RHQCSYLIN+  +EFL  GG  
Sbjct: 80  SLHTQYLESFLRSQFYMLRMDGPLPLPDRHYIAIMAAARHQCSYLINMHVDEFLKTGGIA 139

Query: 183 DWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNG---WSLGELCHALVLLVN 239
           +WL GL Y P++L  L E+NK+LAHRPWL+   H+QKL K G   WSL EL HA+VLL +
Sbjct: 140 EWLNGLEYVPQRLRNLNEINKLLAHRPWLITKEHIQKLVKTGENNWSLPELVHAVVLLAH 199

Query: 240 FHSLASFVFACGVNEELD 257
           +H+LASFVF  G+N E D
Sbjct: 200 YHALASFVFGSGINPERD 217

Mus musculus (taxid: 10090)

>sp|P58003|SESN1_XENLA Sestrin-1 OS=Xenopus laevis GN=sesn1 PE=2 SV=1

 Score =  186 bits (471), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 92/166 (55%), Positives = 120/166 (72%), Gaps = 7/166 (4%)

Query: 100 SEKSQLYS--DDTF--LQKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIA 155
           SE + ++S   D F  L +LD++T VM +HP YL  FL+TQ+Y+++ DGPLS  Y+HYI 
Sbjct: 54  SEDANMHSVFADAFTDLGRLDNITLVMVFHPQYLESFLKTQHYLLQMDGPLSPCYQHYIG 113

Query: 156 IMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPS 215
           IMAA RHQCSYL+NL   +F+  GGDQ WL GL  AP+KL  L E+NK+LAHRPWL+   
Sbjct: 114 IMAASRHQCSYLVNLHVNDFIHHGGDQKWLNGLENAPQKLRNLGELNKMLAHRPWLITKE 173

Query: 216 HLQKLTKNG---WSLGELCHALVLLVNFHSLASFVFACGVNEELDS 258
           H+++L K G   WSL EL HA+VLL ++HSLASF F CG+N E+ S
Sbjct: 174 HIKQLLKAGEHSWSLAELIHAIVLLAHYHSLASFTFGCGINPEIHS 219

Involved in the reduction of peroxiredoxins.

Xenopus laevis (taxid: 8355)

>sp|Q4R6P7|SESN1_MACFA Sestrin-1 OS=Macaca fascicularis GN=SESN1 PE=2 SV=1

 Score =  182 bits (462), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 89/164 (54%), Positives = 118/164 (71%), Gaps = 7/164 (4%)

Query: 100 SEKSQLYS--DDTF--LQKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIA 155
           SE +Q+++   D+F  L +LD++T VM +HP YL  FL+TQ+Y+++ DGPL   YRHYI 
Sbjct: 62  SEDAQMHALFADSFAALGRLDNITLVMVFHPQYLESFLKTQHYLLQMDGPLPLHYRHYIG 121

Query: 156 IMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPS 215
           IMAA RHQCSYL+NL   +FL  GGD  WL GL  AP+KL  L E+NK+LAHRPWL+   
Sbjct: 122 IMAAARHQCSYLVNLHVNDFLHVGGDPKWLNGLENAPQKLQNLGELNKVLAHRPWLITKE 181

Query: 216 HLQKLTK---NGWSLGELCHALVLLVNFHSLASFVFACGVNEEL 256
           H++ L K   + WSL EL HA+VLL ++HSLASF F CG++ E+
Sbjct: 182 HIEGLLKAEEHSWSLAELVHAVVLLTHYHSLASFTFGCGISPEI 225

Involved in the reduction of peroxiredoxins.

Macaca fascicularis (taxid: 9541)

>sp|P58006|SESN1_MOUSE Sestrin-1 OS=Mus musculus GN=Sesn1 PE=2 SV=3

 Score =  182 bits (462), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 89/164 (54%), Positives = 118/164 (71%), Gaps = 7/164 (4%)

Query: 100 SEKSQLYS--DDTF--LQKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIA 155
           SE +Q+++   D+F  L +LD++T VM +HP YL  FL+TQ+Y+++ DGPL   YRHYI 
Sbjct: 62  SEDAQMHALFADSFAALGRLDNITLVMVFHPQYLESFLKTQHYLLQMDGPLPLHYRHYIG 121

Query: 156 IMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPS 215
           IMAA RHQCSYL+NL   +FL  GGD  WL GL  AP+KL  L E+NK+LAHRPWL+   
Sbjct: 122 IMAAARHQCSYLVNLHVSDFLHVGGDPKWLNGLENAPQKLQNLGELNKVLAHRPWLITKE 181

Query: 216 HLQKLTK---NGWSLGELCHALVLLVNFHSLASFVFACGVNEEL 256
           H++ L K   + WSL EL HA+VLL ++HSLASF F CG++ E+
Sbjct: 182 HIEGLLKAEEHSWSLAELVHAVVLLTHYHSLASFTFGCGISPEI 225

Involved in the reduction of peroxiredoxins.

Mus musculus (taxid: 10090)

>sp|Q9Y6P5|SESN1_HUMAN Sestrin-1 OS=Homo sapiens GN=SESN1 PE=1 SV=2

 Score =  182 bits (462), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 89/164 (54%), Positives = 118/164 (71%), Gaps = 7/164 (4%)

Query: 100 SEKSQLYS--DDTF--LQKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIA 155
           SE +Q+++   D+F  L +LD++T VM +HP YL  FL+TQ+Y+++ DGPL   YRHYI 
Sbjct: 62  SEDAQMHALFADSFAALGRLDNITLVMVFHPQYLESFLKTQHYLLQMDGPLPLHYRHYIG 121

Query: 156 IMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPS 215
           IMAA RHQCSYL+NL   +FL  GGD  WL GL  AP+KL  L E+NK+LAHRPWL+   
Sbjct: 122 IMAAARHQCSYLVNLHVNDFLHVGGDPKWLNGLENAPQKLQNLGELNKVLAHRPWLITKE 181

Query: 216 HLQKLTK---NGWSLGELCHALVLLVNFHSLASFVFACGVNEEL 256
           H++ L K   + WSL EL HA+VLL ++HSLASF F CG++ E+
Sbjct: 182 HIEGLLKAEEHSWSLAELVHAVVLLTHYHSLASFTFGCGISPEI 225

Involved in the reduction of peroxiredoxins. May also be regulator of cellular growth.

Homo sapiens (taxid: 9606)

>sp|P58043|SESN2_MOUSE Sestrin-2 OS=Mus musculus GN=Sesn2 PE=2 SV=1

 Score =  169 bits (428), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 83/148 (56%), Positives = 101/148 (68%), Gaps = 3/148 (2%)

Query: 114 KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKE 173
           ++D++  VMG HP YL+ F R    ++  DGPL+  +RHYIAIMAA RHQCSYL+     
Sbjct: 75  RVDNLAVVMGLHPDYLSSFWRLHYLLLHTDGPLASSWRHYIAIMAAARHQCSYLVGSHMT 134

Query: 174 EFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNG---WSLGEL 230
           EFL  GGD +WL GL  AP+KL  L EVNK+LAHRPWL+   H+Q L K G   WSL EL
Sbjct: 135 EFLQTGGDPEWLLGLHRAPEKLRKLSEVNKLLAHRPWLITKEHIQALLKTGEHSWSLAEL 194

Query: 231 CHALVLLVNFHSLASFVFACGVNEELDS 258
             ALVLL + HSLASFVF CG+  E D+
Sbjct: 195 IQALVLLTHCHSLASFVFGCGILPEGDA 222

Involved in the reduction of peroxiredoxins.

Mus musculus (taxid: 10090)

>sp|Q58CN8|SESN2_BOVIN Sestrin-2 OS=Bos taurus GN=SESN2 PE=2 SV=2

 Score =  166 bits (421), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 81/147 (55%), Positives = 98/147 (66%), Gaps = 3/147 (2%)

Query: 114 KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKE 173
           ++D++  VMG HP Y   F R    ++  DGPL+  +RHYIAIMAA RHQCSYL+     
Sbjct: 66  RVDNLAVVMGLHPDYFTSFWRLHCLLLHTDGPLANSWRHYIAIMAAARHQCSYLVGSHMA 125

Query: 174 EFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNG---WSLGEL 230
           EFL  GGD +WL GL  AP+KL  L E+NK+LAHRPWL+   H+Q L K G   WSL EL
Sbjct: 126 EFLQTGGDPEWLLGLHRAPEKLRKLSEINKLLAHRPWLITKEHIQALLKTGEHSWSLAEL 185

Query: 231 CHALVLLVNFHSLASFVFACGVNEELD 257
             ALVLL + HSLASFVF CG+  E D
Sbjct: 186 IQALVLLTHCHSLASFVFGCGILPEGD 212

Involved in the reduction of peroxiredoxins.

Bos taurus (taxid: 9913)

>sp|P58004|SESN2_HUMAN Sestrin-2 OS=Homo sapiens GN=SESN2 PE=1 SV=1

 Score =  166 bits (420), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 80/148 (54%), Positives = 99/148 (66%), Gaps = 3/148 (2%)

Query: 114 KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKE 173
           ++D++  VMG HP Y   F R    ++  DGPL+  +RHYIAIMAA RHQCSYL+     
Sbjct: 75  RVDNLAVVMGLHPDYFTSFWRLHYLLLHTDGPLASSWRHYIAIMAAARHQCSYLVGSHMA 134

Query: 174 EFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNG---WSLGEL 230
           EFL  GGD +WL GL  AP+KL  L E+NK+LAHRPWL+   H+Q L K G   WSL EL
Sbjct: 135 EFLQTGGDPEWLLGLHRAPEKLRKLSEINKLLAHRPWLITKEHIQALLKTGEHTWSLAEL 194

Query: 231 CHALVLLVNFHSLASFVFACGVNEELDS 258
             ALVLL + HSL+SFVF CG+  E D+
Sbjct: 195 IQALVLLTHCHSLSSFVFGCGILPEGDA 222

Involved in the reduction of peroxiredoxins.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
242012365	442	P53 regulated pa26 nuclear protein sestr	0.639	0.414	0.621	3e-61
383865853	967	PREDICTED: uncharacterized protein LOC10	0.632	0.187	0.610	5e-59
322785496	435	hypothetical protein SINV_08098 [Solenop	0.583	0.383	0.660	5e-59
189235350	468	PREDICTED: similar to AGAP007169-PA [Tri	0.534	0.326	0.694	1e-58
270004228	658	hypothetical protein TcasGA2_TC003553 [T	0.622	0.270	0.612	2e-58
350422741	948	PREDICTED: sestrin-1-like [Bombus impati	0.611	0.184	0.620	3e-58
328779757	948	PREDICTED: sestrin-1-like isoform 1 [Api	0.611	0.184	0.620	3e-58
332020492	434	Sestrin-like protein [Acromyrmex echinat	0.583	0.384	0.649	3e-58
380011124	405	PREDICTED: sestrin-1-like [Apis florea]	0.611	0.432	0.620	3e-58
307195599	438	Putative sestrin [Harpegnathos saltator]	0.583	0.381	0.643	3e-58

>gi|242012365|ref|XP_002426903.1| P53 regulated pa26 nuclear protein sestrin, putative [Pediculus humanus corporis] gi|212511132|gb|EEB14165.1| P53 regulated pa26 nuclear protein sestrin, putative [Pediculus humanus corporis]

 Score =  241 bits (615), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 118/190 (62%), Positives = 145/190 (76%), Gaps = 7/190 (3%)

Query: 101 EKSQLYSDDTFLQ--KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMA 158
           E++ L   D FLQ  +LDHVTQVMGYHP YL+IFL+TQN+I+RGDGPL Y+YRH+IAIMA
Sbjct: 9   EQTHLLFVDAFLQNNRLDHVTQVMGYHPLYLDIFLKTQNFILRGDGPLPYDYRHFIAIMA 68

Query: 159 AGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQ 218
           AGRH+CSYLINLQK+EFL QGG+ +WLKGL   P+KL  LY++NKILAHRPWL+N SH++
Sbjct: 69  AGRHKCSYLINLQKQEFLLQGGESNWLKGLKAIPQKLRDLYDINKILAHRPWLMNKSHIE 128

Query: 219 KLTK--NGWSLGELCHALVLLVNFHSLASFVFACGVNEELDSLTDSKNKLSDKKTSSNLT 276
           KLTK    WSL E+ HA+V+L +FH+L+SFVF CGVNEELD   D   +  D     N T
Sbjct: 129 KLTKGTESWSLAEVVHAIVILAHFHALSSFVFGCGVNEELDQ--DGIRRF-DGSLGDNAT 185

Query: 277 KKSVKRPGNV 286
            KS  +  N 
Sbjct: 186 PKSSPKVNNA 195

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383865853|ref|XP_003708387.1| PREDICTED: uncharacterized protein LOC100882536 [Megachile rotundata]

 Score =  233 bits (595), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 113/185 (61%), Positives = 142/185 (76%), Gaps = 4/185 (2%)

Query: 101 EKSQLYSDDTFLQ--KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMA 158
           EK+ +   D FLQ  +LDHV++VM  HP+YL  FLRTQ++I+RGDGPL Y+YRH IAIMA
Sbjct: 526 EKTHILLMDAFLQNNRLDHVSRVMASHPSYLEHFLRTQHFILRGDGPLPYDYRHLIAIMA 585

Query: 159 AGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQ 218
           AGRHQCSYLINLQK EFL QGGD  WL+GL   P KL  LYE+NKILAHRPWLLN +H++
Sbjct: 586 AGRHQCSYLINLQKGEFLLQGGDPSWLRGLKSIPGKLQDLYEINKILAHRPWLLNKTHIE 645

Query: 219 KLTK--NGWSLGELCHALVLLVNFHSLASFVFACGVNEELDSLTDSKNKLSDKKTSSNLT 276
           KLTK  + WSL E+ HA+VLL +FHSL+SFVF+CG+NEELD++     K + +  S+N++
Sbjct: 646 KLTKGADSWSLAEVVHAIVLLAHFHSLSSFVFSCGINEELDNVAGHNYKQNIQDNSNNVS 705

Query: 277 KKSVK 281
               K
Sbjct: 706 TAKEK 710

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322785496|gb|EFZ12165.1| hypothetical protein SINV_08098 [Solenopsis invicta]

 Score =  233 bits (595), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 113/171 (66%), Positives = 138/171 (80%), Gaps = 4/171 (2%)

Query: 109 DTFLQ--KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSY 166
           ++FLQ  +LDHV++VM  HP+YL+ FLRTQ++I+RGDGPL Y+YRH IAIMAAGRHQCSY
Sbjct: 2   ESFLQNNRLDHVSRVMSSHPSYLDHFLRTQHFILRGDGPLPYDYRHLIAIMAAGRHQCSY 61

Query: 167 LINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTK--NG 224
           LINLQK EFL QGGD  WL GL   P KL  LYE+NKILAHRPWLLN SH++KLTK  + 
Sbjct: 62  LINLQKGEFLVQGGDPSWLHGLRSIPGKLQDLYEINKILAHRPWLLNKSHIEKLTKGDDN 121

Query: 225 WSLGELCHALVLLVNFHSLASFVFACGVNEELDSLTDSKNKLSDKKTSSNL 275
           WSL E+ HA+VLL +FHSL+SFVF+CGVNEELD++T    K + +  SSN+
Sbjct: 122 WSLAEVVHAIVLLAHFHSLSSFVFSCGVNEELDNITGHHYKENIQDNSSNI 172

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189235350|ref|XP_975462.2| PREDICTED: similar to AGAP007169-PA [Tribolium castaneum]

 Score =  232 bits (592), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 109/157 (69%), Positives = 129/157 (82%), Gaps = 4/157 (2%)

Query: 109 DTFLQ--KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSY 166
           D FLQ  +LDHV+QVMGYH +YL+ FL+TQN+I+RGDGPL + YRHYIAIMAAGRHQC Y
Sbjct: 47  DAFLQSNRLDHVSQVMGYHTSYLDHFLKTQNFILRGDGPLPFHYRHYIAIMAAGRHQCGY 106

Query: 167 LINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLT--KNG 224
           LINLQK+EFL  GGD  WLKGLS  P KL  LY++NKILAHRPWLLN SH++KLT  K+ 
Sbjct: 107 LINLQKQEFLLLGGDHSWLKGLSSIPPKLKNLYDINKILAHRPWLLNTSHIEKLTKGKDS 166

Query: 225 WSLGELCHALVLLVNFHSLASFVFACGVNEELDSLTD 261
           WSL E+ HA+V+L +FHSL SFVFACGVN+E+D   D
Sbjct: 167 WSLAEVIHAIVILTHFHSLCSFVFACGVNQEVDQAAD 203

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270004228|gb|EFA00676.1| hypothetical protein TcasGA2_TC003553 [Tribolium castaneum]

 Score =  231 bits (590), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 112/183 (61%), Positives = 141/183 (77%), Gaps = 5/183 (2%)

Query: 109 DTFLQ--KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSY 166
           D FLQ  +LDHV+QVMGYH +YL+ FL+TQN+I+RGDGPL + YRHYIAIMAAGRHQC Y
Sbjct: 229 DAFLQSNRLDHVSQVMGYHTSYLDHFLKTQNFILRGDGPLPFHYRHYIAIMAAGRHQCGY 288

Query: 167 LINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLT--KNG 224
           LINLQK+EFL  GGD  WLKGLS  P KL  LY++NKILAHRPWLLN SH++KLT  K+ 
Sbjct: 289 LINLQKQEFLLLGGDHSWLKGLSSIPPKLKNLYDINKILAHRPWLLNTSHIEKLTKGKDS 348

Query: 225 WSLGELCHALVLLVNFHSLASFVFACGVNEELDSLTDSKNKL-SDKKTSSNLTKKSVKRP 283
           WSL E+ HA+V+L +FHSL SFVFACGVN+E+D     K ++  D + S++ +  +   P
Sbjct: 349 WSLAEVIHAIVILTHFHSLCSFVFACGVNQEVDQAGGFKYQMPGDTRGSAHPSNTNQTNP 408

Query: 284 GNV 286
            ++
Sbjct: 409 KDI 411

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350422741|ref|XP_003493268.1| PREDICTED: sestrin-1-like [Bombus impatiens]

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 111/179 (62%), Positives = 140/179 (78%), Gaps = 4/179 (2%)

Query: 101 EKSQLYSDDTFLQ--KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMA 158
           EK+ +   D FLQ  +LDHV++VM  HP+YL  FLRTQ++I+RGDGPL Y+YRH IAIMA
Sbjct: 507 EKTHILLMDAFLQNNRLDHVSRVMASHPSYLEHFLRTQHFILRGDGPLPYDYRHLIAIMA 566

Query: 159 AGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQ 218
           AGRHQCSYLINLQK EF+ QGGD  WL+GL   P KL  LYE+NKILAHRPWLLN +H++
Sbjct: 567 AGRHQCSYLINLQKGEFILQGGDPSWLRGLKSIPGKLQDLYEINKILAHRPWLLNKTHIE 626

Query: 219 KLTK--NGWSLGELCHALVLLVNFHSLASFVFACGVNEELDSLTDSKNKLSDKKTSSNL 275
           KLTK  + WSL E+ HA+VLL +FHSL+SFVF+CG+NEELD++     K + +  S+N+
Sbjct: 627 KLTKGADSWSLAEVVHAIVLLAHFHSLSSFVFSCGINEELDNVAGHHYKENVQDNSNNV 685

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328779757|ref|XP_394521.4| PREDICTED: sestrin-1-like isoform 1 [Apis mellifera]

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 111/179 (62%), Positives = 140/179 (78%), Gaps = 4/179 (2%)

Query: 101 EKSQLYSDDTFLQ--KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMA 158
           EK+ +   D FLQ  +LDHV++VM  HP+YL  FLRTQ++I+RGDGPL Y+YRH IAIMA
Sbjct: 507 EKTHILLMDAFLQNNRLDHVSRVMASHPSYLEHFLRTQHFILRGDGPLPYDYRHLIAIMA 566

Query: 159 AGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQ 218
           AGRHQCSYLINLQK EF+ QGGD  WL+GL   P KL  LYE+NKILAHRPWLLN +H++
Sbjct: 567 AGRHQCSYLINLQKGEFILQGGDPSWLRGLKSIPGKLQDLYEINKILAHRPWLLNKTHIE 626

Query: 219 KLTK--NGWSLGELCHALVLLVNFHSLASFVFACGVNEELDSLTDSKNKLSDKKTSSNL 275
           KLTK  + WSL E+ HA+VLL +FHSL+SFVF+CG+NEELD++     K + +  S+N+
Sbjct: 627 KLTKGADSWSLAEVVHAIVLLAHFHSLSSFVFSCGINEELDNVAGHHYKENVQDNSNNV 685

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020492|gb|EGI60907.1| Sestrin-like protein [Acromyrmex echinatior]

 Score =  231 bits (589), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 111/171 (64%), Positives = 135/171 (78%), Gaps = 4/171 (2%)

Query: 109 DTFLQ--KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSY 166
           D FLQ  +LDHV++VM  HP+YL  FLRTQ +++RGDGPL Y+YRH IAIMAAGRHQCSY
Sbjct: 2   DAFLQNNRLDHVSRVMSSHPSYLEHFLRTQQFVLRGDGPLPYDYRHLIAIMAAGRHQCSY 61

Query: 167 LINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTK--NG 224
           LINLQK EFL QGGD  WL+GL   P KL  LYE+NKILAHRPWLLN SH++KLTK  + 
Sbjct: 62  LINLQKGEFLLQGGDPSWLQGLRSIPGKLQDLYEINKILAHRPWLLNKSHIEKLTKGDDN 121

Query: 225 WSLGELCHALVLLVNFHSLASFVFACGVNEELDSLTDSKNKLSDKKTSSNL 275
           WSL E+ HA+VLL +FHSL+SFVF+CG+NEELD++T    K + +  SS +
Sbjct: 122 WSLAEVVHAIVLLAHFHSLSSFVFSCGINEELDNVTGHHYKENIQDNSSKI 172

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380011124|ref|XP_003689662.1| PREDICTED: sestrin-1-like [Apis florea]

 Score =  231 bits (588), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 111/179 (62%), Positives = 140/179 (78%), Gaps = 4/179 (2%)

Query: 101 EKSQLYSDDTFLQ--KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMA 158
           EK+ +   D FLQ  +LDHV++VM  HP+YL  FLRTQ++I+RGDGPL Y+YRH IAIMA
Sbjct: 196 EKTHILLMDAFLQNNRLDHVSRVMASHPSYLEHFLRTQHFILRGDGPLPYDYRHLIAIMA 255

Query: 159 AGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQ 218
           AGRHQCSYLINLQK EF+ QGGD  WL+GL   P KL  LYE+NKILAHRPWLLN +H++
Sbjct: 256 AGRHQCSYLINLQKGEFILQGGDPSWLRGLKSIPGKLQDLYEINKILAHRPWLLNKTHIE 315

Query: 219 KLTK--NGWSLGELCHALVLLVNFHSLASFVFACGVNEELDSLTDSKNKLSDKKTSSNL 275
           KLTK  + WSL E+ HA+VLL +FHSL+SFVF+CG+NEELD++     K + +  S+N+
Sbjct: 316 KLTKGADSWSLAEVVHAIVLLAHFHSLSSFVFSCGINEELDNVAGHHYKENVQDNSNNV 374

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307195599|gb|EFN77449.1| Putative sestrin [Harpegnathos saltator]

 Score =  231 bits (588), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 110/171 (64%), Positives = 137/171 (80%), Gaps = 4/171 (2%)

Query: 109 DTFLQ--KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSY 166
           D FLQ  +LDHV++VM  HPTYL+ FLRTQ++I+RGDGPL Y+YRH IAIMAAGRHQCSY
Sbjct: 5   DAFLQNNRLDHVSRVMSSHPTYLDHFLRTQHFILRGDGPLPYDYRHLIAIMAAGRHQCSY 64

Query: 167 LINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTK--NG 224
           LINLQK EFL QGGD  WL+GL   P KL  LYE+NKILAHRPWLL  +H++KLTK  + 
Sbjct: 65  LINLQKGEFLLQGGDLSWLQGLRSIPGKLQDLYEINKILAHRPWLLTKAHIEKLTKGDDN 124

Query: 225 WSLGELCHALVLLVNFHSLASFVFACGVNEELDSLTDSKNKLSDKKTSSNL 275
           W++ E+ HA+VLL +FHSL+SFVF+CG+NEELD++T    K + +  SSN+
Sbjct: 125 WTIAEVVHAIVLLAHFHSLSSFVFSCGINEELDNVTGHHYKDNSQDNSSNV 175

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
FB|FBgn0034897	497	Sesn "Sestrin" [Drosophila mel	0.538	0.309	0.576	1.8e-48
ZFIN|ZDB-GENE-040718-408	499	sesn1 "sestrin 1" [Danio rerio	0.604	0.346	0.511	6.2e-46
UNIPROTKB|F1NYM5	471	SESN3 "Uncharacterized protein	0.615	0.373	0.522	2.7e-45
UNIPROTKB|F1NNH8	458	SESN1 "Uncharacterized protein	0.534	0.334	0.566	3.4e-45
UNIPROTKB|P58005	492	SESN3 "Sestrin-3" [Homo sapien	0.503	0.292	0.598	7.1e-45
UNIPROTKB|F1STI8	492	SESN3 "Uncharacterized protein	0.503	0.292	0.591	9.1e-45
UNIPROTKB|A6QQS4	492	SESN1 "Uncharacterized protein	0.548	0.319	0.542	1.9e-44
UNIPROTKB|A7MBI2	551	SESN1 "SESN1 protein" [Bos tau	0.548	0.284	0.542	1.9e-44
UNIPROTKB|F1MFJ7	476	SESN3 "Uncharacterized protein	0.503	0.302	0.591	2.4e-44
UNIPROTKB|F1PQA1	492	SESN3 "Uncharacterized protein	0.503	0.292	0.591	2.4e-44

FB|FBgn0034897 Sesn "Sestrin" [Drosophila melanogaster (taxid:7227)]

 Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
 Identities = 90/156 (57%), Positives = 120/156 (76%)

Query:   112 LQKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQ 171
             L  LD VTQV+GYHP + + FL TQN+IM+GDGPL  +YR+Y+AI+AA RHQC YL+   
Sbjct:    34 LDDLDQVTQVIGYHPQFHDHFLATQNFIMKGDGPLPNDYRYYLAIIAAARHQCPYLVKRY 93

Query:   172 KEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTK--NGWSLGE 229
             ++EF++QGGD  WL GL + P KL  +Y++NKILAHRPWLL   H+++LTK  N WSL E
Sbjct:    94 EKEFINQGGDSAWLGGLDFIPAKLRAIYDINKILAHRPWLLRKEHIERLTKGKNSWSLSE 153

Query:   230 LCHALVLLVNFHSLASFVFACGVNEELDSLTDSKNK 265
             + HA+VLL +FHSL+SFVF+CG+ ++LD L+  K K
Sbjct:   154 VVHAMVLLSHFHSLSSFVFSCGLTQKLDGLSSPKLK 189

GO:0005634 "nucleus" evidence=IEA;NAS

GO:0007050 "cell cycle arrest" evidence=IEA

GO:0002121 "inter-male aggressive behavior" evidence=IMP

GO:0030308 "negative regulation of cell growth" evidence=IMP

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IMP

GO:0010259 "multicellular organismal aging" evidence=IMP

GO:0000422 "mitochondrion degradation" evidence=IMP

ZFIN|ZDB-GENE-040718-408 sesn1 "sestrin 1" [Danio rerio (taxid:7955)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 91/178 (51%), Positives = 124/178 (69%)

Query:    84 RMTSEEYNNVLKEFHHSEKSQLYSDDTF--LQKLDHVTQVMGYHPTYLNIFLRTQNYIMR 141
             R+++   + +L+     E++Q   +D F  L +LD+++ VMG+HP YL  FLRTQ+Y+++
Sbjct:    59 RVSTPLLSQILQVSKLDERTQSIFEDAFAVLGRLDNISLVMGFHPQYLESFLRTQHYLLQ 118

Query:   142 GDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEV 201
              DGPLS   RHYI IMAA RHQC+YL+NL   +FL  GGD  WL GL  AP+KL  L E+
Sbjct:   119 MDGPLSLHCRHYIGIMAAARHQCTYLVNLHVNDFLQVGGDPKWLNGLEEAPRKLQALGEL 178

Query:   202 NKILAHRPWLLNPSHLQKLTK---NGWSLGELCHALVLLVNFHSLASFVFACGVNEEL 256
             NKILAHRPWLL   H+++L K   + WSL EL HA+VLL ++HSLASF F CG+  ++
Sbjct:   179 NKILAHRPWLLTKEHIERLLKAEEHSWSLAELIHAVVLLTHYHSLASFTFGCGITPDI 236

GO:0005634 "nucleus" evidence=IEA

GO:0007050 "cell cycle arrest" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0007368 "determination of left/right symmetry" evidence=IMP

UNIPROTKB|F1NYM5 SESN3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 94/180 (52%), Positives = 122/180 (67%)

Query:    91 NNVLKEFHHSEKSQLYSDDTFLQ-KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYE 149
             N V++     E++ L  ++     +LD++TQVM  H  YL  FLR+Q Y++R DGPL   
Sbjct:    36 NEVMQANGLDERTNLLVEEYSTSGRLDNITQVMSIHTQYLESFLRSQFYMLRMDGPLPLP 95

Query:   150 YRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRP 209
             YRHYIAIMAA RHQCSYLIN+  +EFL  GG  +WL GL Y P++L  L E+NK+LAHRP
Sbjct:    96 YRHYIAIMAAARHQCSYLINMHVDEFLKTGGIAEWLNGLEYIPQRLKNLNEINKLLAHRP 155

Query:   210 WLLNPSHLQKLTKNG---WSLGELCHALVLLVNFHSLASFVFACGVNEELDSLTDSKNKL 266
             WL+   H+QKL K G   WSL EL HA+VLL ++H+LASFVF  G+N E D  T +  +L
Sbjct:   156 WLITKEHIQKLVKTGENNWSLPELVHAVVLLAHYHALASFVFGSGINPERDPDTSNGVRL 215

GO:0005634 "nucleus" evidence=IEA

GO:0007050 "cell cycle arrest" evidence=IEA

UNIPROTKB|F1NNH8 SESN1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 89/157 (56%), Positives = 114/157 (72%)

Query:   105 LYSDD-TFLQKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQ 163
             L++D    L +LD+VT VM +HP YL  FL+TQ+Y+++ DGPL   YRHYI IMAA RHQ
Sbjct:    36 LFADSFATLGRLDNVTLVMVFHPQYLESFLKTQHYLLQMDGPLPLHYRHYIGIMAAARHQ 95

Query:   164 CSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTK- 222
             CSYL+NL   +FL  GGD  WL GL  AP+KL  L E+NK+LAHRPWL+   H+++L K 
Sbjct:    96 CSYLVNLHVNDFLHVGGDPKWLNGLENAPQKLQNLGELNKMLAHRPWLITKEHIEQLLKT 155

Query:   223 --NGWSLGELCHALVLLVNFHSLASFVFACGVNEELD 257
               N WSL EL HA+VLL ++HSLASF F CG++ E+D
Sbjct:   156 EENSWSLAELIHAVVLLTHYHSLASFTFGCGISPEID 192

GO:0005634 "nucleus" evidence=IEA

GO:0007050 "cell cycle arrest" evidence=IEA

UNIPROTKB|P58005 SESN3 "Sestrin-3" [Homo sapiens (taxid:9606)]

 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 88/147 (59%), Positives = 108/147 (73%)

Query:   114 KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKE 173
             +LD++TQVM  H  YL  FLR+Q Y++R DGPL   YRHYIAIMAA RHQCSYLIN+  +
Sbjct:    71 RLDNITQVMSLHTQYLESFLRSQFYMLRMDGPLPLPYRHYIAIMAAARHQCSYLINMHVD 130

Query:   174 EFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNG---WSLGEL 230
             EFL  GG  +WL GL Y P++L  L E+NK+LAHRPWL+   H+QKL K G   WSL EL
Sbjct:   131 EFLKTGGIAEWLNGLEYVPQRLKNLNEINKLLAHRPWLITKEHIQKLVKTGENNWSLPEL 190

Query:   231 CHALVLLVNFHSLASFVFACGVNEELD 257
              HA+VLL ++H+LASFVF  G+N E D
Sbjct:   191 VHAVVLLAHYHALASFVFGSGINPERD 217

GO:0005634 "nucleus" evidence=IEA

GO:0007050 "cell cycle arrest" evidence=IEA

UNIPROTKB|F1STI8 SESN3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
 Identities = 87/147 (59%), Positives = 109/147 (74%)

Query:   114 KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKE 173
             +LD++TQVM  H  YL  FLR+Q Y++R DGPL   +RHYIAIMAA RHQCSYLIN+  +
Sbjct:    71 RLDNITQVMSLHTQYLESFLRSQFYMLRMDGPLPLPHRHYIAIMAAARHQCSYLINMHVD 130

Query:   174 EFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNG---WSLGEL 230
             EFL  GG+ +WL GL Y P++L  L E+NK+LAHRPWL+   H+QKL K G   WSL EL
Sbjct:   131 EFLKTGGNAEWLNGLEYVPQRLKNLNEINKLLAHRPWLITKEHIQKLVKTGENNWSLPEL 190

Query:   231 CHALVLLVNFHSLASFVFACGVNEELD 257
              HA+VLL ++H+LASFVF  G+N E D
Sbjct:   191 VHAVVLLAHYHALASFVFGSGINPERD 217

GO:0007050 "cell cycle arrest" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|A6QQS4 SESN1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 89/164 (54%), Positives = 118/164 (71%)

Query:   100 SEKSQLYS--DDTF--LQKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIA 155
             SE +Q+++   D+F  L +LD++T VM +HP YL  FL+TQ+Y+++ DGPL   YRHYI 
Sbjct:    62 SEDAQMHTLFTDSFAALGRLDNITLVMVFHPQYLESFLKTQHYLLQMDGPLPLHYRHYIG 121

Query:   156 IMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPS 215
             IMAA RHQCSYL+NL   +FL  GGD  WL GL  AP+KL  L E+NK+LAHRPWL+   
Sbjct:   122 IMAAARHQCSYLVNLHVNDFLHVGGDPKWLNGLENAPQKLQNLGELNKVLAHRPWLITKE 181

Query:   216 HLQKLTK---NGWSLGELCHALVLLVNFHSLASFVFACGVNEEL 256
             H++ L K   + WSL EL HA+VLL ++HSLASF F CG++ E+
Sbjct:   182 HIEGLLKAEEHSWSLAELVHAVVLLTHYHSLASFTFGCGISPEI 225

GO:0007050 "cell cycle arrest" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|A7MBI2 SESN1 "SESN1 protein" [Bos taurus (taxid:9913)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 89/164 (54%), Positives = 118/164 (71%)

Query:   100 SEKSQLYS--DDTF--LQKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIA 155
             SE +Q+++   D+F  L +LD++T VM +HP YL  FL+TQ+Y+++ DGPL   YRHYI 
Sbjct:   121 SEDAQMHTLFTDSFAALGRLDNITLVMVFHPQYLESFLKTQHYLLQMDGPLPLHYRHYIG 180

Query:   156 IMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPS 215
             IMAA RHQCSYL+NL   +FL  GGD  WL GL  AP+KL  L E+NK+LAHRPWL+   
Sbjct:   181 IMAAARHQCSYLVNLHVNDFLHVGGDPKWLNGLENAPQKLQNLGELNKVLAHRPWLITKE 240

Query:   216 HLQKLTK---NGWSLGELCHALVLLVNFHSLASFVFACGVNEEL 256
             H++ L K   + WSL EL HA+VLL ++HSLASF F CG++ E+
Sbjct:   241 HIEGLLKAEEHSWSLAELVHAVVLLTHYHSLASFTFGCGISPEI 284

GO:0007050 "cell cycle arrest" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1MFJ7 SESN3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 87/147 (59%), Positives = 108/147 (73%)

Query:   114 KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKE 173
             +LD++TQVM  H  YL  FLR+Q Y++R DGPL   +RHYIAIMAA RHQCSYLIN+  +
Sbjct:    55 RLDNITQVMSLHTQYLESFLRSQFYMLRMDGPLPLPHRHYIAIMAAARHQCSYLINMHVD 114

Query:   174 EFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNG---WSLGEL 230
             EFL  GG  +WL GL Y P++L  L E+NK+LAHRPWL+   H+QKL K G   WSL EL
Sbjct:   115 EFLKTGGIAEWLNGLQYVPQRLKNLNEINKLLAHRPWLITKEHIQKLVKTGENNWSLPEL 174

Query:   231 CHALVLLVNFHSLASFVFACGVNEELD 257
              HA+VLL ++H+LASFVF  G+N E D
Sbjct:   175 VHAVVLLAHYHALASFVFGSGINPERD 201

GO:0007050 "cell cycle arrest" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1PQA1 SESN3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 87/147 (59%), Positives = 108/147 (73%)

Query:   114 KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKE 173
             +LD++TQVM  H  YL  FLR+Q Y++R DGPL   +RHYIAIMAA RHQCSYLIN+  +
Sbjct:    71 RLDNITQVMSLHTQYLESFLRSQFYMLRMDGPLPLPHRHYIAIMAAARHQCSYLINMHVD 130

Query:   174 EFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNG---WSLGEL 230
             EFL  GG  +WL GL Y P++L  L E+NK+LAHRPWL+   H+QKL K G   WSL EL
Sbjct:   131 EFLKTGGIAEWLNGLEYVPQRLKNLNEINKLLAHRPWLITKEHIQKLVKTGENNWSLPEL 190

Query:   231 CHALVLLVNFHSLASFVFACGVNEELD 257
              HA+VLL ++H+LASFVF  G+N E D
Sbjct:   191 VHAVVLLAHYHALASFVFGSGINPERD 217

GO:0007050 "cell cycle arrest" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9W1K5	SESN_DROME	No assigned EC number	0.5769	0.5384	0.3098	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	286
pfam04636	450	pfam04636, PA26, PA26 p53-induced protein (sestrin	3e-78
pfam04636	450	pfam04636, PA26, PA26 p53-induced protein (sestrin	2e-23

>gnl|CDD|218186 pfam04636, PA26, PA26 p53-induced protein (sestrin)

 Score =  243 bits (623), Expect = 3e-78
 Identities = 97/198 (48%), Positives = 123/198 (62%), Gaps = 7/198 (3%)

Query: 81  YPERMTSEEYNNVLKEFHHSEKSQLYSDDTFLQ--KLDHVTQVMGYHPTYLNIFLRTQNY 138
            P     E+   +L      E++     D FL   ++D++T+VMG HP YL  FLRTQ+Y
Sbjct: 3   GPSAFIPEKE--ILSVDTDDERTHTLFTDVFLFLGRVDNLTRVMGLHPQYLEHFLRTQHY 60

Query: 139 IMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLL 198
           ++R DGPL   YRHYIAIMAA RHQCSYL+NL + EFL  GGD  WL GL +AP KL  L
Sbjct: 61  LLRMDGPLPLHYRHYIAIMAAARHQCSYLVNLHEREFLQVGGDPRWLNGLDHAPPKLRKL 120

Query: 199 YEVNKILAHRPWLLNPSHLQKLTKNG---WSLGELCHALVLLVNFHSLASFVFACGVNEE 255
            E+NK+LAHRPWL+   H++ L K G   WSL EL HA+VLL +FH+L+SFVF CG+  E
Sbjct: 121 LELNKLLAHRPWLITKEHIEVLVKTGEASWSLAELVHAVVLLAHFHALSSFVFGCGIEPE 180

Query: 256 LDSLTDSKNKLSDKKTSS 273
           +D             T  
Sbjct: 181 VDLEESHTLSPPSVLTQC 198

PA26 is a p53-inducible protein. Its function is unknown. It has similarity to pfam04636 in its N-terminus. Length = 450

>gnl|CDD|218186 pfam04636, PA26, PA26 p53-induced protein (sestrin)

 Score = 99.0 bits (247), Expect = 2e-23
 Identities = 34/52 (65%), Positives = 42/52 (80%)

Query: 51  AGIRHDDYDYGEVNQLLERSLKSFIKTTACYPERMTSEEYNNVLKEFHHSEK 102
            GIR+DDYDYGEVNQLL+RSLK +IKT ACYPE+ T   Y++  ++F HSEK
Sbjct: 371 YGIRYDDYDYGEVNQLLDRSLKVYIKTAACYPEKTTKRMYDSFWRQFKHSEK 422

PA26 is a p53-inducible protein. Its function is unknown. It has similarity to pfam04636 in its N-terminus. Length = 450

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	286
PF04636	450	PA26: PA26 p53-induced protein (sestrin); InterPro	100.0
KOG3746|consensus	553		100.0
TIGR01926	177	peroxid_rel uncharacterized peroxidase-related enz	99.95
PF04636	450	PA26: PA26 p53-induced protein (sestrin); InterPro	99.89
KOG3746|consensus	553		99.88
COG2128	177	Uncharacterized conserved protein [Function unknow	99.62
PF02627	85	CMD: Carboxymuconolactone decarboxylase family; In	98.76
TIGR00778	50	ahpD_dom alkylhydroperoxidase AhpD family core dom	98.47
COG4950	193	Uncharacterized protein conserved in bacteria [Fun	98.27
TIGR00777	177	ahpD alkylhydroperoxidase, AhpD family. Members of	97.65
COG0599	124	Uncharacterized homolog of gamma-carboxymuconolact	97.18
TIGR02425	123	decarb_PcaC 4-carboxymuconolactone decarboxylase.	94.69
TIGR02425	123	decarb_PcaC 4-carboxymuconolactone decarboxylase.	92.36
COG0599	124	Uncharacterized homolog of gamma-carboxymuconolact	90.79
PF02627	85	CMD: Carboxymuconolactone decarboxylase family; In	89.69

>PF04636 PA26: PA26 p53-induced protein (sestrin); InterPro: IPR006730 Exposure of mammalian cells to hypoxia, radiation and certain chemotherapeutic agents promotes cell cycle arrest and/or apoptosis

Probab=100.00  E-value=2.3e-55  Score=431.54  Aligned_cols=177  Identities=53%  Similarity=0.997  Sum_probs=169.6

Q ss_pred             hhhccCCChhhhhccccccc--cchhhHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHH
Q psy17685         93 VLKEFHHSEKSQLYSDDTFL--QKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINL  170 (286)
Q Consensus        93 ~L~~~~~~Ek~q~Lf~eaf~--GrVpNV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~  170 (286)
                      +++....+|..+.++.++|.  |||||++++|++||+||++|++++++||+++||||.+|||||||||||||+|+|+|.+
T Consensus        12 ~~~~~~~~~~~~~l~~~~f~~~gri~~~~~v~~~hP~yl~~f~~t~~~l~~~~gpLp~~~R~yIaimaAarh~C~YLv~~   91 (450)
T PF04636_consen   12 ILQVNSEDEETHTLLYDAFLFNGRIDNITRVMSFHPQYLESFLRTQDYLLRGDGPLPYHWRHYIAIMAAARHQCSYLVNL   91 (450)
T ss_pred             ccccCchhHHHHHHHHHHhhhcCCccHHHHHHHhCHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHhCChHHHHH
Confidence            44455667788889999988  9999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhccCChhhhcccCCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHH---CCCChHHHHHHHHHHHHHHHHHHHH
Q psy17685        171 QKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTK---NGWSLGELCHALVLLVNFHSLASFV  247 (286)
Q Consensus       171 H~a~f~~~gGDp~wl~gl~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~---~gWS~~ELv~Av~Ila~fhsl~~fv  247 (286)
                      |+++|+.+||||+||+|++.+|+|+|+|.+||++||||||+|+++||+.|++   ++||++|||||++|+||||+||+||
T Consensus        92 ~~~~Fl~~gG~~~WL~Gl~~~p~Kl~~L~~ln~~Lah~PW~i~~~~i~~L~~~g~~~Wsl~ELv~A~~il~~~HsL~sFv  171 (450)
T PF04636_consen   92 HSQEFLRNGGDPEWLQGLEYIPPKLRNLDELNKLLAHRPWLITKEHIENLLKSGEDSWSLAELVQAVVILAHFHSLSSFV  171 (450)
T ss_pred             HHHHHHHhCCChHHhcCCccCCHHHHHHHHHHHHHhCCcccccHHHHHHHHcCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999   9999999999999999999999999


Q ss_pred             HhcCCCCCcCCCCCCCcCCCCc
Q psy17685        248 FACGVNEELDSLTDSKNKLSDK  269 (286)
Q Consensus       248 ~G~Gi~pe~D~~~g~~~~p~d~  269 (286)
                      +||||+||.|..+|++++|+..
T Consensus       172 ~GcGI~pE~D~~~~~~~~~~s~  193 (450)
T PF04636_consen  172 FGCGINPEIDLEGGHTFRPPSP  193 (450)
T ss_pred             hhcCCCCCcCcccCCCCCCCCC
Confidence            9999999999999999988543

Activation of p53 responsive genes is believed to play an important role in mediating such responses. PA26 is differentially induced by genotoxic stress (UV, gamma-irradiation and cytotoxic drugs) in a p53-dependent manner. PA26 gene is a novel p53 target gene with properties common to the GADD family of growth arrest and DNA damage-inducible stress-response genes, and, thus, a potential novel regulator of cellular growth []. A homolgue found in Xenopus, XPA26, was initially detected in the anterior portion of developing notochord at neurula stages, and later in the entire notochord except its posterior region at tailbud stages []. ; GO: 0007050 cell cycle arrest, 0005634 nucleus

>KOG3746|consensus

Probab=100.00  E-value=1.1e-52  Score=405.13  Aligned_cols=178  Identities=49%  Similarity=0.873  Sum_probs=169.4

Q ss_pred             hhhhccCCChhhhhccccccc--cchhhHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHH
Q psy17685         92 NVLKEFHHSEKSQLYSDDTFL--QKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLIN  169 (286)
Q Consensus        92 s~L~~~~~~Ek~q~Lf~eaf~--GrVpNV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~  169 (286)
                      ++++....++..+.++.+.|.  |||||++++|++||+|+++|+++|.+++.++||||..+||||||||||||||+|+|+
T Consensus       115 eIlq~~te~~r~~al~~~~f~~~grvDnlt~vm~~Hpqy~~sf~rs~~~ml~~dgpLp~s~RHYiaiMAAaRHqCsyLvn  194 (553)
T KOG3746|consen  115 EILQMGTEDKRRHALDELNFDPSGRVDNLTRVMCLHPQYLESFLRSQGYMLVMDGPLPLSYRHYIAIMAAARHQCSYLVN  194 (553)
T ss_pred             HHHhccchHHHHHhhHHhhcCcccccccceeehccCcHHHHHHHhhcceEEEECCCCCchHHHHHHHHHHHHHHhHHHHH
Confidence            577777777777767766677  999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhccCChhhhcccCCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHH---CCCChHHHHHHHHHHHHHHHHHHH
Q psy17685        170 LQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTK---NGWSLGELCHALVLLVNFHSLASF  246 (286)
Q Consensus       170 ~H~a~f~~~gGDp~wl~gl~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~---~gWS~~ELv~Av~Ila~fhsl~~f  246 (286)
                      +|.++|++.||||+||.|++..|+|+|+|.++||+||||||.|+++|||.|.+   +.||++||+||++|++|+|++|+|
T Consensus       195 ~H~~eFL~tGGd~~WLlGle~apqKlrkL~elNklLaHRPWlItkehiq~Llktge~~wSl~eLvhAVvllth~HalaSf  274 (553)
T KOG3746|consen  195 HHVREFLETGGDPEWLLGLEWAPQKLRKLDELNKLLAHRPWLITKEHIQVLLKTGEHFWSLAELVHAVVLLTHYHALASF  274 (553)
T ss_pred             HHHHHHHHhCCCHHHHhhhhhhHHHHhhHHHHHHHHhcCcceeeHHHHHHHHhcCCccccHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999   889999999999999999999999


Q ss_pred             HHhcCCCCCcCCCCCCCcCCCCc
Q psy17685        247 VFACGVNEELDSLTDSKNKLSDK  269 (286)
Q Consensus       247 v~G~Gi~pe~D~~~g~~~~p~d~  269 (286)
                      ++||||+||.|.+++..++++|-
T Consensus       275 vfg~Gi~pe~d~d~~~~~~~~sv  297 (553)
T KOG3746|consen  275 VFGCGIEPEVDLDGSEIFRIPSV  297 (553)
T ss_pred             eeccccCCCcCCCcCccCCCCCC
Confidence            99999999999999999987543

>TIGR01926 peroxid_rel uncharacterized peroxidase-related enzyme

Probab=99.95  E-value=8.4e-27  Score=200.08  Aligned_cols=158  Identities=18%  Similarity=0.223  Sum_probs=144.5

Q ss_pred             CChhhhhccccccc--cchhhHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHH
Q psy17685         99 HSEKSQLYSDDTFL--QKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFL  176 (286)
Q Consensus        99 ~~Ek~q~Lf~eaf~--GrVpNV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~  176 (286)
                      .+++++.++.+...  |++||++++|+++|+.+++|...++.++.++|.||..+||+|++++|..|+|.||+.+|....+
T Consensus        11 a~~~~~~~~~~~~~~~G~v~n~~~~l~~~P~~l~~~~~l~~~~~~~~~~L~~~~relv~l~vs~~ngc~yc~~~H~~~~~   90 (177)
T TIGR01926        11 LTEEQKAYLAKIEEKTGFVPNVFRALAHDPEALRARTAYFNDLMLGEGGLSRAERELIAVVVSRANGCVYCAAVHGAALR   90 (177)
T ss_pred             CCHHHHHHHHHHHHHhCCChHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence            35566777777654  9999999999999999999999999998888999999999999999999999999999999999


Q ss_pred             hccCChhhhc----cc--CCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhc
Q psy17685        177 SQGGDQDWLK----GL--SYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFAC  250 (286)
Q Consensus       177 ~~gGDp~wl~----gl--~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~  250 (286)
                      ..|++++-+.    +.  ...++|+|++++|+..++..|..+++++++.|++.|||++||++++.++++|+++|++..++
T Consensus        91 ~~g~~~~~~~ai~~~~~~~~~~~~e~a~l~~a~~~~~~~~~v~~~~~~~l~~~g~s~~eivel~~~i~~~~~~nr~~~~l  170 (177)
T TIGR01926        91 QLSGDPDLADAVAVNFRDADLSPRERAMLDFAVKLTATPAKVNEADFAALRAAGFSDLDILDLIHSVAFFNWANRLMLAL  170 (177)
T ss_pred             HhcCCHHHHHHHHhCcccCCCCHHHHHHHHHHHHHhhCcccCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            9999886543    21  34799999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCc
Q psy17685        251 GVNEEL  256 (286)
Q Consensus       251 Gi~pe~  256 (286)
                      |+.+|.
T Consensus       171 ~~~~d~  176 (177)
T TIGR01926       171 GEPPNP  176 (177)
T ss_pred             CCCCCC
Confidence            999875

This protein family with length of about 200 amino acids. One member, from Myxococcus xanthus, is a selenoprotein, with an otherwise conserved Cys replaced by Sec. This family is drawn narrowly enough to suggest that These proteins contain a domain described by TIGR00778, with a CxxCxxxHxxxxxxxG motif. Some members of that family are known to act as peroxidases or correlate with resistance to oxidative stress.

>PF04636 PA26: PA26 p53-induced protein (sestrin); InterPro: IPR006730 Exposure of mammalian cells to hypoxia, radiation and certain chemotherapeutic agents promotes cell cycle arrest and/or apoptosis

Probab=99.89  E-value=1.1e-24  Score=214.76  Aligned_cols=76  Identities=49%  Similarity=0.830  Sum_probs=73.0

Q ss_pred             ccCCCCCCCCcchh-hHHhhhhccccCCCchhhhHHHhHhHHhHhhcccCCccccCchhhhhhhhccCCChhhhhcc
Q psy17685         32 RGSIFFEPFRPNLN-RDLLFAGIRHDDYDYGEVNQLLERSLKSFIKTTACYPERMTSEEYNNVLKEFHHSEKSQLYS  107 (286)
Q Consensus        32 ~~~~~~~p~~~~~~-~~~~~~gir~ddy~y~~vn~ll~~~~k~~iK~vaC~PermTk~~~~s~L~~~~~~Ek~q~Lf  107 (286)
                      +..|+|+|||.||| |+|||||||||||||+|||+||+|++|+|||+|+|+||++|+++|.++|+.+++|||+|+.+
T Consensus       351 ~~~VdTs~~R~Aiw~Yiq~i~Gi~~DDydY~evN~lL~r~~K~~iK~~~c~Pe~~t~~~~~~~~~~~~~SEKvHVnL  427 (450)
T PF04636_consen  351 HEDVDTSPFRRAIWNYIQCIFGIRHDDYDYGEVNKLLERSLKVYIKTVACFPEKITKRDYESFWRQFKHSEKVHVNL  427 (450)
T ss_pred             CCCCCcHHHHHHHHHHHHHHhcccccCCCHHHHHHHhhhHHHHHhHhhcccHHHhhHHHhhhcccCCCchHHHHHHH
Confidence            56799999999999 79999999999999999999999999999999999999999999999999999999999733

Activation of p53 responsive genes is believed to play an important role in mediating such responses. PA26 is differentially induced by genotoxic stress (UV, gamma-irradiation and cytotoxic drugs) in a p53-dependent manner. PA26 gene is a novel p53 target gene with properties common to the GADD family of growth arrest and DNA damage-inducible stress-response genes, and, thus, a potential novel regulator of cellular growth []. A homolgue found in Xenopus, XPA26, was initially detected in the anterior portion of developing notochord at neurula stages, and later in the entire notochord except its posterior region at tailbud stages []. ; GO: 0007050 cell cycle arrest, 0005634 nucleus

>KOG3746|consensus

Probab=99.88  E-value=8.7e-25  Score=212.07  Aligned_cols=77  Identities=43%  Similarity=0.665  Sum_probs=73.6

Q ss_pred             hhccCCCCCCCCcchh-hHHhhhhccccCCCchhhhHHHhHhHHhHhhcccCCccccCchhhhhhhhccCCChhhhhc
Q psy17685         30 YFRGSIFFEPFRPNLN-RDLLFAGIRHDDYDYGEVNQLLERSLKSFIKTTACYPERMTSEEYNNVLKEFHHSEKSQLY  106 (286)
Q Consensus        30 ~~~~~~~~~p~~~~~~-~~~~~~gir~ddy~y~~vn~ll~~~~k~~iK~vaC~PermTk~~~~s~L~~~~~~Ek~q~L  106 (286)
                      ....-|+|.-+|.||| |.||+|||||||||||||||+|||++|+|||||+|||||.|+++|+.+|+.+.+|||+|+.
T Consensus       452 amh~~vDTs~lRrAIWNYihc~fGiRyDDYDYgeiNqlLdr~~KvyIKtvaCyPeK~T~rmy~~Fwr~f~hsekvHVn  529 (553)
T KOG3746|consen  452 AMHNEVDTSALRRAIWNYIHCLFGIRYDDYDYGEINQLLDRGTKVYIKTVACYPEKLTSRMYIFFWRYFNHSEKVHVN  529 (553)
T ss_pred             hhhccccHHHHHHHHHHHhheeeeeeecccchHHHHHHHhcCceEEEEEeeechHHHHHHHHHHHHHHhccccchhHH
Confidence            4456799999999999 9999999999999999999999999999999999999999999999999999999999963

>COG2128 Uncharacterized conserved protein [Function unknown]

Probab=99.62  E-value=1.6e-14  Score=124.96  Aligned_cols=142  Identities=14%  Similarity=0.221  Sum_probs=123.1

Q ss_pred             cchhhHHHHHhcCcHHHHHH--HHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCChhhhcc---
Q psy17685        113 QKLDHVTQVMGYHPTYLNIF--LRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKG---  187 (286)
Q Consensus       113 GrVpNV~~vla~~P~yL~~f--~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp~wl~g---  187 (286)
                      |.+|...+ ....+.+++.+  ....+.++.+.+.|+..+||.|++.+|..|+|.||+..|....+..|.+++.+..   
T Consensus        25 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~elv~~~~s~~ngc~~C~~~h~~~a~~~g~~~~~~~~~~~  103 (177)
T COG2128          25 GEIPALIR-VLANSPLYLALAFAALENALLAGSGALPPVLRELVALRAARINGCAYCVAMHRKVARLLGLSADDLAALLA  103 (177)
T ss_pred             cchhhhhh-cccchHHHHHHHHHHHHHHHHhcccCCCHHHhHHHHHHHHHHhcCHHHHHHHHHHHHHcCCcHHHHHHHHh
Confidence            66666655 33333566655  7788888888888999999999999999999999999998888999988876642   


Q ss_pred             ----cCCCCHHHHHHHHHHHHHccCCCC-CCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy17685        188 ----LSYAPKKLGLLYEVNKILAHRPWL-LNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVNEE  255 (286)
Q Consensus       188 ----l~~ip~KlraL~~~n~~Lah~Pw~-I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~Gi~pe  255 (286)
                          -...++|+|+++.++..+|..|-. +.+++.+.|++.|+|.++|++++.+++.++..|++..++|+.++
T Consensus       104 ~~~~~~~~~~~e~a~L~~~~~~~~~~~~~~~~~~~~~lr~~g~~~~qi~el~~~i~~~~~~nr~~~al~~~~~  176 (177)
T COG2128         104 WRDSAAFLDPRERAALAYAAALTINPCGAVSDAHFAALRAAGFDDEQILELVLAIALINAWNRLNAALGIPPD  176 (177)
T ss_pred             cccCCccCCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence                256888999999999999999995 89999999999999999999999999999999999999998875

>PF02627 CMD: Carboxymuconolactone decarboxylase family; InterPro: IPR003779 The catechol and protocatechuate branches of the 3-oxoadipate pathway, which are important for the bacterial degradation of aromatic compounds, converge at the common intermediate 3-oxoadipate enol-lactone

Probab=98.76  E-value=1e-08  Score=76.85  Aligned_cols=77  Identities=14%  Similarity=0.245  Sum_probs=62.3

Q ss_pred             cHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCChhhhccc------CCCCHHHHHHH
Q psy17685        126 PTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGL------SYAPKKLGLLY  199 (286)
Q Consensus       126 P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp~wl~gl------~~ip~KlraL~  199 (286)
                      |++++.|..+...++..+|+||..+||+|++.+|..|+|.||+..|....+..|-+++-+..+      ..-.++.++..
T Consensus         1 P~~~~~~~~~~~~~~~~~~~L~~~~reli~la~s~~~~~~~c~~~H~~~a~~~G~t~eei~~~~~~~~~~~~~~~~~~a~   80 (85)
T PF02627_consen    1 PELAEAFAEFREALLARDGGLDPKERELIALAVSAANGCAYCVKAHARAARKAGVTEEEIDEAVRWAAPYCGSPRERAAL   80 (85)
T ss_dssp             HHHHHHHHHHHHHHHHSSSSS-HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHccCCcHHHHHHH
Confidence            899999999999998877899999999999999999999999999999999999887655321      11234555555


Q ss_pred             HHH
Q psy17685        200 EVN  202 (286)
Q Consensus       200 ~~n  202 (286)
                      +++
T Consensus        81 ~~a   83 (85)
T PF02627_consen   81 AAA   83 (85)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

Carboxymuconolactone decarboxylase (CMD) is involved in protocatechuate catabolism. In some bacteria a gene fusion event leads to expression of CMD with a hydrolase involved in the same pathway [].; GO: 0051920 peroxiredoxin activity, 0055114 oxidation-reduction process; PDB: 2GMY_E 2CWQ_C 2QEU_B 1P8C_D 1VKE_C 2OUW_A 2AF7_G 3D7I_A 1ME5_B 1KNC_A ....

>TIGR00778 ahpD_dom alkylhydroperoxidase AhpD family core domain

Probab=98.47  E-value=2e-07  Score=65.01  Aligned_cols=42  Identities=21%  Similarity=0.325  Sum_probs=38.8

Q ss_pred             CCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCChhhh
Q psy17685        144 GPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWL  185 (286)
Q Consensus       144 g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp~wl  185 (286)
                      |.||..+||+|++.+|..|+|.||+.+|....+..|.+++-+
T Consensus         1 g~l~~~~reli~l~~s~~~~C~yc~~~H~~~a~~~G~~~~ei   42 (50)
T TIGR00778         1 GALDAATKELIAIAVSQINGCGYCLDAHTKLARKAGVTAEEL   42 (50)
T ss_pred             CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCHHHH
Confidence            679999999999999999999999999999999999887643

Members of the family include the alkylhydroperoxidase AhpD of Mycobacterium tuberculosis, a macrophage infectivity potentiator peptide of Legionella pneumophila, and an uncharacterized peptide in the tetrachloroethene reductive dehalogenase operon of Dehalospirillum multivorans. We suggest that many peptides containing this domain may have alkylhydroperoxidase or related antioxidant activity.

>COG4950 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.27  E-value=7.6e-06  Score=73.13  Aligned_cols=115  Identities=16%  Similarity=0.116  Sum_probs=102.7

Q ss_pred             CCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCChhhhcccC-----CCCHHHHHHHHHHHHHccCCCCCCHHHH
Q psy17685        143 DGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLS-----YAPKKLGLLYEVNKILAHRPWLLNPSHL  217 (286)
Q Consensus       143 ~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp~wl~gl~-----~ip~KlraL~~~n~~Lah~Pw~I~~~di  217 (286)
                      .+.++..+|--.|..+|..-+-.=+-.+.++.+-...|+++-..+.+     ....|++++.+++..|+.+|-.++.+-+
T Consensus        61 ~~~fs~~~R~slAl~va~~~~~~~L~~hY~arLap~p~~~~~~~~~~pd~~~es~~RLaai~~yar~L~~~P~~~~r~~l  140 (193)
T COG4950          61 PGTFSAYERLSLALTVAQVTGAQRLCAHYAARLAPLPGSESEPSGADPDAARESNERLAAITQYARLLASSPSDIDREAL  140 (193)
T ss_pred             cCccchhHHHHHHHHHHHhhCchhhhHHHHHHhccCCCcccccccCCCcchhhhhHHHHHHHHHHHHHhcCcccCCHHHH
Confidence            58899999999999999988888888888888888888887776543     4678999999999999999999999999


Q ss_pred             HHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCCCcC
Q psy17685        218 QKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVNEELD  257 (286)
Q Consensus       218 ~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~Gi~pe~D  257 (286)
                      +.|-+.|||..++|-...|++|.++-.++|.|+-.-.+.+
T Consensus       141 ~~L~~vGLta~DiVtLsqlI~Fv~yQ~rvvAglralr~~~  180 (193)
T COG4950         141 ERLYDVGLTARDIVTLSQLIGFVGYQARVVAGLRALRGNP  180 (193)
T ss_pred             HHHhhcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999999999986655544

>TIGR00777 ahpD alkylhydroperoxidase, AhpD family

Probab=97.65  E-value=0.00011  Score=65.53  Aligned_cols=41  Identities=7%  Similarity=0.138  Sum_probs=37.2

Q ss_pred             CCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCCh
Q psy17685        142 GDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQ  182 (286)
Q Consensus       142 ~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp  182 (286)
                      +.++||+..+|.|.+.||..|+|.||+.+|.+..+..|-.+
T Consensus       108 ~~~gLdk~~~ELI~LaVSqINGC~yCv~aHt~~ar~~Gvs~  148 (177)
T TIGR00777       108 ANPGIPKVNFELWSFAVSAINGCGHCLDSHEHTLRTVGVDR  148 (177)
T ss_pred             hcCCCCHHHHHHHHHHHHHHhCChHHHHHHHHHHHHcCCCH
Confidence            35789999999999999999999999999999999877554

Members of this family are alkylhydroperoxidases, which catalyze the reduction of peroxides to their corresponding alcohols via oxidation of cysteine residues. In these alkylhydroperoxidases, the cysteines are located in a conserved -CXXC- motif located towards the COOH terminus. In Mycobacterium tuberculosis, two non-homologous alkylhydroperoxidases, AhpD and AhpC, are found in the same operon.

>COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown]

Probab=97.18  E-value=0.00097  Score=55.22  Aligned_cols=61  Identities=21%  Similarity=0.284  Sum_probs=51.8

Q ss_pred             HHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCCh
Q psy17685        121 VMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQ  182 (286)
Q Consensus       121 vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp  182 (286)
                      +-.-.|+.+..|. .+..+...+|.||...|++|+|.+++..+|.+|+..|.+.-+.+|-.+
T Consensus        27 ~~~~~p~~~~~~~-~~~~~~~~~~~Ld~ktr~Li~ia~~~a~~~~~~l~~H~~~Al~~GaT~   87 (124)
T COG0599          27 FAPEFPELLEAFY-AFGEIWFRKGALDAKTRELIAIAVLAALGCEDCLKVHVRAALENGATK   87 (124)
T ss_pred             HhHhhHHHHHHHH-HhhhHHhcCCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCCCH
Confidence            4556888888855 667777777899999999999999999999999999999988776444

>TIGR02425 decarb_PcaC 4-carboxymuconolactone decarboxylase

Probab=94.69  E-value=0.17  Score=42.37  Aligned_cols=87  Identities=10%  Similarity=0.081  Sum_probs=67.2

Q ss_pred             HHhcCcHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCChhhhcc-------cCCCC
Q psy17685        121 VMGYHPTYLNIFLR-TQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKG-------LSYAP  192 (286)
Q Consensus       121 vla~~P~yL~~f~~-~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp~wl~g-------l~~ip  192 (286)
                      .-.+.|+..+-..+ .|..++.. +.|+..+|++|.|.+.+..+|..|+..|...-+..|-.|+-++.       ....|
T Consensus        28 ~~~~~p~~~~~~~~~~fgdv~~r-~~Ld~k~R~Litla~laa~g~~~~l~~h~~~Al~~G~T~~ei~Evl~q~~~y~G~P  106 (123)
T TIGR02425        28 TTDFDQPFQELITEYAWGTVWTR-PGLTKRERSLVTIALLAALGRDEELAMHVRATANTGVTEDDIKEVLLHVAIYAGVP  106 (123)
T ss_pred             ccccCHHHHHHHHHHHhhhhhcc-CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCHH
Confidence            34567875544444 46666665 58999999999999999999999999999999999988866643       25677


Q ss_pred             HHHHHHHHHHHHHccC
Q psy17685        193 KKLGLLYEVNKILAHR  208 (286)
Q Consensus       193 ~KlraL~~~n~~Lah~  208 (286)
                      .=..++...++.+..+
T Consensus       107 ~a~~al~~~~~v~~e~  122 (123)
T TIGR02425       107 AANHAFALAKEALAEM  122 (123)
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            7777777777776544

Members of this family are 4-carboxymuconolactone decarboxylase, which catalyzes the third step in the catabolism of protocatechuate (and therefore the fourth step in the catabolism of para-hydroxybenzoate, of 3-hydroxybenzoate, of vanillate, etc.). Most members of this family are encoded within protocatechuate catabolism operons. This protein is sometimes found as a fusion protein with other enzymes of the pathway, as in Rhodococcus opacus, Streptomyces avermitilis, and Caulobacter crescentus.

>TIGR02425 decarb_PcaC 4-carboxymuconolactone decarboxylase

Probab=92.36  E-value=0.2  Score=41.96  Aligned_cols=65  Identities=11%  Similarity=0.051  Sum_probs=54.7

Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy17685        189 SYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVN  253 (286)
Q Consensus       189 ~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~Gi~  253 (286)
                      ..+|.|.|.|..++...|..-..--+.|+...++.|+|..||.+++..++.|--..+...++.+.
T Consensus        51 ~~Ld~k~R~Litla~laa~g~~~~l~~h~~~Al~~G~T~~ei~Evl~q~~~y~G~P~a~~al~~~  115 (123)
T TIGR02425        51 PGLTKRERSLVTIALLAALGRDEELAMHVRATANTGVTEDDIKEVLLHVAIYAGVPAANHAFALA  115 (123)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            57999999999999999987654455888888889999999999999999997777776665543

Members of this family are 4-carboxymuconolactone decarboxylase, which catalyzes the third step in the catabolism of protocatechuate (and therefore the fourth step in the catabolism of para-hydroxybenzoate, of 3-hydroxybenzoate, of vanillate, etc.). Most members of this family are encoded within protocatechuate catabolism operons. This protein is sometimes found as a fusion protein with other enzymes of the pathway, as in Rhodococcus opacus, Streptomyces avermitilis, and Caulobacter crescentus.

>COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown]

Probab=90.79  E-value=0.66  Score=38.32  Aligned_cols=62  Identities=15%  Similarity=0.014  Sum_probs=55.0

Q ss_pred             CCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhcC
Q psy17685        190 YAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACG  251 (286)
Q Consensus       190 ~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~G  251 (286)
                      .+|.|.|.|.-++...+.+-..-.+-|++.-++.|=|.+||.+++.+++.+.....+..+..
T Consensus        50 ~Ld~ktr~Li~ia~~~a~~~~~~l~~H~~~Al~~GaT~eEI~e~i~~~a~~~g~p~~~~a~~  111 (124)
T COG0599          50 ALDAKTRELIAIAVLAALGCEDCLKVHVRAALENGATKEEIAEAIAVAAIYAGGPAAANAFR  111 (124)
T ss_pred             CCCHHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHHHHHHHH
Confidence            69999999999999999999998999999888789999999999999999977666655543

>PF02627 CMD: Carboxymuconolactone decarboxylase family; InterPro: IPR003779 The catechol and protocatechuate branches of the 3-oxoadipate pathway, which are important for the bacterial degradation of aromatic compounds, converge at the common intermediate 3-oxoadipate enol-lactone

Probab=89.69  E-value=0.83  Score=33.67  Aligned_cols=62  Identities=15%  Similarity=-0.048  Sum_probs=51.5

Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhc
Q psy17685        189 SYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFAC  250 (286)
Q Consensus       189 ~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~  250 (286)
                      ..+|+|.|.|..++.-.+..--.-...|...+++.|.|.+||.+++.+...+....+...++
T Consensus        19 ~~L~~~~reli~la~s~~~~~~~c~~~H~~~a~~~G~t~eei~~~~~~~~~~~~~~~~~~a~   80 (85)
T PF02627_consen   19 GGLDPKERELIALAVSAANGCAYCVKAHARAARKAGVTEEEIDEAVRWAAPYCGSPRERAAL   80 (85)
T ss_dssp             SSS-HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHcCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHccCCcHHHHHHH
Confidence            45999999999999888866555348999999999999999999999999998877776554

Carboxymuconolactone decarboxylase (CMD) is involved in protocatechuate catabolism. In some bacteria a gene fusion event leads to expression of CMD with a hydrolase involved in the same pathway [].; GO: 0051920 peroxiredoxin activity, 0055114 oxidation-reduction process; PDB: 2GMY_E 2CWQ_C 2QEU_B 1P8C_D 1VKE_C 2OUW_A 2AF7_G 3D7I_A 1ME5_B 1KNC_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	286
3c1l_A	188	Putative antioxidant defense protein MLR4105; stru	7e-08
2pfx_A	191	Uncharacterized peroxidase-related protein; YP_614	2e-07
2oyo_A	196	Uncharacterized peroxidase-related protein; YP_604	2e-07
2prr_A	197	Alkylhydroperoxidase AHPD core: uncharacterized P	3e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>3c1l_A Putative antioxidant defense protein MLR4105; structural genomics, joint center for structural genomics, J protein structure initiative; 2.00A {Mesorhizobium loti} Length = 188

 Score = 50.6 bits (121), Expect = 7e-08
 Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 6/123 (4%)

Query: 114 KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKE 173
            + +V +   +    L  F    N +M G+  LS   R  IA+  +  + C Y +     
Sbjct: 33  LVPNVLKAYAFDDKKLRAFTDIYNDLMLGESGLSKLDREMIAVAVSSINHCYYCLTAHGA 92

Query: 174 EFLSQGGDQDWLKGLSYAPK------KLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSL 227
                 GD    + L    +      +   + E    L   P  +  +    L K G+S 
Sbjct: 93  AVRQLSGDPALGEMLVMNFRAADLSPRQTAMLEFAVKLTEEPAKIVEADRAALRKAGFSD 152

Query: 228 GEL 230
            ++
Sbjct: 153 RDI 155

>2pfx_A Uncharacterized peroxidase-related protein; YP_614459.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE PG4; 1.70A {Silicibacter SP} SCOP: a.152.1.3 Length = 191

 Score = 49.5 bits (118), Expect = 2e-07
 Identities = 19/123 (15%), Positives = 47/123 (38%), Gaps = 6/123 (4%)

Query: 114 KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKE 173
            + +V +   ++   LN F    N +M G+  LS   R  IA++ +  ++C Y +     
Sbjct: 36  MVPNVLKAYAFNVEKLNAFTAMYNDLMLGESQLSKLEREMIAVVVSSINKCFYCLVAHGA 95

Query: 174 EFLSQGGDQDWLKGLSYAPK------KLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSL 227
                 GD    + L    +      +  ++ +    +      +  +  + L  +G++ 
Sbjct: 96  AVRQLSGDPQLGEMLVMNYRVAPLDARQRVMLDFAAKMTRASAEIEEADREVLRSHGFND 155

Query: 228 GEL 230
            ++
Sbjct: 156 RDI 158

>2oyo_A Uncharacterized peroxidase-related protein; YP_604910.1, uncharacterised peroxidase-related, uncharacter peroxidase-related; 1.51A {Deinococcus geothermalis} SCOP: a.152.1.3 Length = 196

 Score = 49.0 bits (117), Expect = 2e-07
 Identities = 17/123 (13%), Positives = 42/123 (34%), Gaps = 6/123 (4%)

Query: 114 KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKE 173
            + +V +    +      +    N ++  +G L+   R  +A++ +G ++C Y       
Sbjct: 41  FVPNVFRAQAVNGEQFLAWWNYFNLLLNKEGYLTNAERELVAVVVSGVNRCLYCAVSHGA 100

Query: 174 EFLSQGGDQDWLKGLSYAPK------KLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSL 227
                 GD      ++   +      +   L    + L   P  +  + L+ L   G   
Sbjct: 101 ALREFLGDPQKADAVAVNWRHADLTEREQALAAYAEKLTRHPAEVTAADLEPLRAVGLDD 160

Query: 228 GEL 230
            ++
Sbjct: 161 HQI 163

>2prr_A Alkylhydroperoxidase AHPD core: uncharacterized P related protein; YP_296737.1, carboxymuconolactone decarboxylase family; HET: PGE; 2.15A {Ralstonia eutropha} SCOP: a.152.1.3 Length = 197

 Score = 49.1 bits (117), Expect = 3e-07
 Identities = 15/123 (12%), Positives = 40/123 (32%), Gaps = 6/123 (4%)

Query: 114 KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKE 173
            + +V   + + P     F    + +M  DG L+   R  I +  +  +QC Y +     
Sbjct: 37  FVPNVFLTLAHRPDEFRAFFAYHDALMLKDGGLTKGEREMIVVATSAANQCLYCVVAHGA 96

Query: 174 EFLSQGGDQDWLKGLSYAPK------KLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSL 227
                         ++          +   + +    +      +N +  + L ++G++ 
Sbjct: 97  ILRIYEKKPLVADQVAVNYLKADIPPRQRAMLDFALKVCKASHEVNEADFEALREHGFTD 156

Query: 228 GEL 230
            + 
Sbjct: 157 EDA 159

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 3e-04
 Identities = 37/251 (14%), Positives = 77/251 (30%), Gaps = 58/251 (23%)

Query: 55  HDDYDYGEV----NQLLERSLKSFIKTTACY--PERM----TSEEYNNVLKEFHHSEKSQ 104
           H D++ GE       +L     +F+    C    +      + EE ++++        + 
Sbjct: 6   HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTL 65

Query: 105 LYSDDTFLQKLDHVTQVM--------------GYHPTYLNIFLRTQNYI-----MRGDGP 145
                T L K + + Q                          + T+ YI     +  D  
Sbjct: 66  RLF-WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124

Query: 146 LSYEY-----RHYIAIMAAGRHQCSYLINLQKEEFLS-QG----GDQDWLKGLSYAPKKL 195
           +  +Y     + Y+ +  A       L+ L+  + +   G    G   W+        K+
Sbjct: 125 VFAKYNVSRLQPYLKLRQA-------LLELRPAKNVLIDGVLGSGKT-WVALDVCLSYKV 176

Query: 196 GLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVNEE 255
               +  KI     W LN  +          L +L + +    N+ S +    +  +   
Sbjct: 177 QCKMD-FKIF----W-LNLKNCNSPETVLEMLQKLLYQIDP--NWTSRSD--HSSNIKLR 226

Query: 256 LDSLTDSKNKL 266
           + S+     +L
Sbjct: 227 IHSIQAELRRL 237

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	286
3c1l_A	188	Putative antioxidant defense protein MLR4105; stru	99.96
2pfx_A	191	Uncharacterized peroxidase-related protein; YP_614	99.96
2oyo_A	196	Uncharacterized peroxidase-related protein; YP_604	99.96
2prr_A	197	Alkylhydroperoxidase AHPD core: uncharacterized P	99.95
3lvy_A	207	Carboxymuconolactone decarboxylase family; alpha-s	99.94
2gmy_A	153	Hypothetical protein ATU0492; structural genomics,	99.86
2o4d_A	165	Hypothetical protein PA0269; unknown function; 1.8	99.84
2ouw_A	138	Alkylhydroperoxidase AHPD core; YP_425393.1, carbo	99.74
2cwq_A	137	Hypothetical protein TTHA0727; conserved hypotheti	99.4
2qeu_A	141	Putative carboxymuconolactone decarboxylase; YP_55	99.2
3bey_A	96	Conserved protein O27018; TT217, NESG, structural	99.13
3d7i_A	105	Carboxymuconolactone decarboxylase family protein;	99.11
1p8c_A	145	Conserved hypothetical protein; structural genomic	98.9
1vke_A	133	Carboxymuconolactone decarboxylase family protein;	98.79
2q0t_A	263	Putative gamma-carboxymuconolactone decarboxylase;	98.79
2q0t_A	263	Putative gamma-carboxymuconolactone decarboxylase;	98.38
2af7_A	125	Gamma-carboxymuconolactone decarboxylase; O26336_m	97.97
1gu9_A	177	Alkylhydroperoxidase D; oxidoreductase; 1.9A {Myco	97.87
3bjx_A	311	Halocarboxylic acid dehalogenase DEHI; plasmid, hy	97.76
1gu9_A	177	Alkylhydroperoxidase D; oxidoreductase; 1.9A {Myco	97.64
4g9q_A	269	4-carboxymuconolactone decarboxylase; PSI-biology,	97.06
3bjx_A	311	Halocarboxylic acid dehalogenase DEHI; plasmid, hy	96.76
4g9q_A	269	4-carboxymuconolactone decarboxylase; PSI-biology,	91.06
2af7_A	125	Gamma-carboxymuconolactone decarboxylase; O26336_m	87.77

>3c1l_A Putative antioxidant defense protein MLR4105; structural genomics, joint center for structural genomics, J protein structure initiative; 2.00A {Mesorhizobium loti}

Probab=99.96  E-value=2.3e-29  Score=216.58  Aligned_cols=160  Identities=18%  Similarity=0.176  Sum_probs=148.0

Q ss_pred             CCChhhhhccccccc--cchhhHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHH
Q psy17685         98 HHSEKSQLYSDDTFL--QKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEF  175 (286)
Q Consensus        98 ~~~Ek~q~Lf~eaf~--GrVpNV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f  175 (286)
                      ..++.++.++.....  |+|||++++++++|+.+++|+.+++.++..+|+||..+||+|++.+|..|+|.||+.+|....
T Consensus        15 ~~~~~~~~~~~~~~~~~G~vpn~~~~l~~~P~~~~~~~~l~~~~~~~~~~L~~~~rEli~l~vs~~ngC~yC~~~H~~~a   94 (188)
T 3c1l_A           15 ELSEPTKAYFAKCEEKLGLVPNVLKAYAFDDKKLRAFTDIYNDLMLGESGLSKLDREMIAVAVSSINHCYYCLTAHGAAV   94 (188)
T ss_dssp             CCCHHHHHHHHHHHHHSSSCCHHHHHHTTCHHHHHHHHHHHHHHHHSSCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHcCCCcHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            557788878777654  999999999999999999999999999988899999999999999999999999999999999


Q ss_pred             HhccCChhhhcccC------CCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHh
Q psy17685        176 LSQGGDQDWLKGLS------YAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFA  249 (286)
Q Consensus       176 ~~~gGDp~wl~gl~------~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G  249 (286)
                      +..|.+++.++.+.      ..++|+|++++|+..+|..|+.++++++++|+++|||++||++++.++++||++|++..+
T Consensus        95 ~~~G~~~~~i~~l~~~~~~~~~~~~e~a~l~~a~~lt~~~~~v~d~~~~~l~~~G~s~~ei~el~~~ia~~~~~nr~~~~  174 (188)
T 3c1l_A           95 RQLSGDPALGEMLVMNFRAADLSPRQTAMLEFAVKLTEEPAKIVEADRAALRKAGFSDRDIWDIASTAAFFNMSNRVAAA  174 (188)
T ss_dssp             HHHHSCHHHHHHHHHCGGGGCCCHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHcCCCHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999996665432      589999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcC
Q psy17685        250 CGVNEELD  257 (286)
Q Consensus       250 ~Gi~pe~D  257 (286)
                      +|+.++.+
T Consensus       175 ~~~~~d~~  182 (188)
T 3c1l_A          175 IDMRPNDE  182 (188)
T ss_dssp             HTCCCCGG
T ss_pred             hCCCCChH
Confidence            99987643

>2pfx_A Uncharacterized peroxidase-related protein; YP_614459.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE PG4; 1.70A {Silicibacter SP} SCOP: a.152.1.3

Probab=99.96  E-value=2.4e-29  Score=217.38  Aligned_cols=160  Identities=14%  Similarity=0.172  Sum_probs=147.5

Q ss_pred             CCChhhhhccccccc--cchhhHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHH
Q psy17685         98 HHSEKSQLYSDDTFL--QKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEF  175 (286)
Q Consensus        98 ~~~Ek~q~Lf~eaf~--GrVpNV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f  175 (286)
                      ..++.++.++.....  |+|||++++++++|+.+++|..+++.++..+|+||..+||+|++.+|..|+|.||+.+|....
T Consensus        18 ~~~~~~~~~~~~~~~~~G~vpn~~~~l~~~P~~~~~~~~l~~~~~~~~~~L~~~~rEli~l~vs~~ngC~yC~~~H~~~a   97 (191)
T 2pfx_A           18 PLPDETQKYFEICQEKLGMVPNVLKAYAFNVEKLNAFTAMYNDLMLGESQLSKLEREMIAVVVSSINKCFYCLVAHGAAV   97 (191)
T ss_dssp             SCCHHHHHHHHHHHHHHSSCCHHHHHHTTSHHHHHHHHHHHHHHHHSSCSSCHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHHHHHcCCCcHHHHHHHcCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence            446777777776644  999999999999999999999999999988899999999999999999999999999999999


Q ss_pred             HhccCChhhhccc------CCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHh
Q psy17685        176 LSQGGDQDWLKGL------SYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFA  249 (286)
Q Consensus       176 ~~~gGDp~wl~gl------~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G  249 (286)
                      +..|.+++.++.+      ...++|+|++++|+..+|..|+.++++++++|+++|||++||++++.++++||++|++..+
T Consensus        98 ~~~G~~~~~i~~l~~~~~~~~~~~~e~a~l~~a~~lt~~~~~v~d~~~~~l~~~G~s~~ei~el~~~ia~~~~~nr~~~~  177 (191)
T 2pfx_A           98 RQLSGDPQLGEMLVMNYRVAPLDARQRVMLDFAAKMTRASAEIEEADREVLRSHGFNDRDIWDIANVTGFFNMTNRVASA  177 (191)
T ss_dssp             HHHHTCHHHHHHHHHCGGGSCCCHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHcCCCHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999666543      2589999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcC
Q psy17685        250 CGVNEELD  257 (286)
Q Consensus       250 ~Gi~pe~D  257 (286)
                      +|+.++.+
T Consensus       178 ~~~~~d~~  185 (191)
T 2pfx_A          178 TAMMPNAE  185 (191)
T ss_dssp             HTCCCCGG
T ss_pred             hCCCCChH
Confidence            99987643

>2oyo_A Uncharacterized peroxidase-related protein; YP_604910.1, uncharacterised peroxidase-related, uncharacter peroxidase-related; 1.51A {Deinococcus geothermalis} SCOP: a.152.1.3

Probab=99.96  E-value=1.1e-28  Score=214.38  Aligned_cols=159  Identities=13%  Similarity=0.130  Sum_probs=146.8

Q ss_pred             CCChhhhhccccccc--cchhhHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHH
Q psy17685         98 HHSEKSQLYSDDTFL--QKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEF  175 (286)
Q Consensus        98 ~~~Ek~q~Lf~eaf~--GrVpNV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f  175 (286)
                      ..++.++.++..+..  |+|||++++++++|+.+++|+.+++.++..+|+||..+||+|++.+|..|+|.||+.+|....
T Consensus        23 ~~~~~~~~~~~~~~~~~G~vpn~~~~la~~P~~~~~~~~l~~~~~~~~~~L~~~~rEli~l~vs~~ngC~yC~~~H~~~a  102 (196)
T 2oyo_A           23 QVPEGVRKLWAKAEANIGFVPNVFRAQAVNGEQFLAWWNYFNLLLNKEGYLTNAERELVAVVVSGVNRCLYCAVSHGAAL  102 (196)
T ss_dssp             GSCHHHHHHHHHHHHHHSSCCTHHHHGGGSHHHHHHHHHHHHHHHTSCCSSCHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHHHHHcCCCcHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence            456777777777654  999999999999999999999999999988899999999999999999999999999999999


Q ss_pred             HhccCChhhhccc------CCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHh
Q psy17685        176 LSQGGDQDWLKGL------SYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFA  249 (286)
Q Consensus       176 ~~~gGDp~wl~gl------~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G  249 (286)
                      +..|.+++.++.+      ...++|+|++++|+..++..|+.++++++++|+++|||++||++++.++++||++|++..+
T Consensus       103 ~~~G~~~~~i~~l~~~~~~~~~~~~e~a~l~~a~~lt~~~~~v~d~~~~~l~~~G~s~~ei~el~~~ia~~~~~nr~~~~  182 (196)
T 2oyo_A          103 REFLGDPQKADAVAVNWRHADLTEREQALAAYAEKLTRHPAEVTAADLEPLRAVGLDDHQIMELVQVIGMFNLTNRVSSA  182 (196)
T ss_dssp             HHHHTCHHHHHHHHHCGGGSCCCHHHHHHHHHHHHHHHCGGGCCGGGGHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHcCCCHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999655433      2689999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCc
Q psy17685        250 CGVNEEL  256 (286)
Q Consensus       250 ~Gi~pe~  256 (286)
                      +|+.++.
T Consensus       183 ~~~~~d~  189 (196)
T 2oyo_A          183 LGFVPNP  189 (196)
T ss_dssp             TTCCCCH
T ss_pred             cCCCCCH
Confidence            9998764

>2prr_A Alkylhydroperoxidase AHPD core: uncharacterized P related protein; YP_296737.1, carboxymuconolactone decarboxylase family; HET: PGE; 2.15A {Ralstonia eutropha} SCOP: a.152.1.3

Probab=99.95  E-value=2e-28  Score=212.74  Aligned_cols=160  Identities=11%  Similarity=0.133  Sum_probs=147.0

Q ss_pred             CCChhhhhccccccc--cchhhHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHH
Q psy17685         98 HHSEKSQLYSDDTFL--QKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEF  175 (286)
Q Consensus        98 ~~~Ek~q~Lf~eaf~--GrVpNV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f  175 (286)
                      ..++.++.++..+..  |+|||++++|+++|+.+++|+.+++.++..+|+||..+||+|++.+|..|+|.||+.+|....
T Consensus        19 ~~~~~~~~~~~~~~~~~G~vpn~~~~l~~~P~~~~~~~~l~~~~~~~~~~L~~~~rELi~l~vs~~ngC~yC~~~H~~~a   98 (197)
T 2prr_A           19 ALPDDIRQRILEVQDKAGFVPNVFLTLAHRPDEFRAFFAYHDALMLKDGGLTKGEREMIVVATSAANQCLYCVVAHGAIL   98 (197)
T ss_dssp             GSCHHHHHHHHHHHHHHSSCCHHHHHHTTSHHHHHHHHHHHHHHHSSCSSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHHHHhcCCCcHHHHHHHcCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence            446677777776654  999999999999999999999999999988899999999999999999999999999999999


Q ss_pred             HhccCChhhhccc------CCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHh
Q psy17685        176 LSQGGDQDWLKGL------SYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFA  249 (286)
Q Consensus       176 ~~~gGDp~wl~gl------~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G  249 (286)
                      +..|.+++.++.+      ...++|+|++++|+..+|..|..++++++++|+++|||++||++++.++++||++|++..+
T Consensus        99 ~~~G~~~~~i~~l~~~~~~~~~~~~era~l~~a~~lt~~~~~v~d~~~~~l~~~G~s~~ei~el~~~ia~~~~~nr~~~~  178 (197)
T 2prr_A           99 RIYEKKPLVADQVAVNYLKADIPPRQRAMLDFALKVCKASHEVNEADFEALREHGFTDEDAWDIAAITAFFGLSNRMANT  178 (197)
T ss_dssp             HHHHTCTTHHHHHHHHGGGSSCCHHHHHHHHHHHHHHHHGGGCCHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999665433      2689999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcC
Q psy17685        250 CGVNEELD  257 (286)
Q Consensus       250 ~Gi~pe~D  257 (286)
                      +|+.++.+
T Consensus       179 ~~~~~d~~  186 (197)
T 2prr_A          179 IGMRPNDE  186 (197)
T ss_dssp             HTCCCCHH
T ss_pred             cCCCCChh
Confidence            99987744

>3lvy_A Carboxymuconolactone decarboxylase family; alpha-structure, structural genomics, PSI-2, protein structure initiative; 2.10A {Streptococcus mutans}

Probab=99.94  E-value=4.5e-26  Score=201.61  Aligned_cols=159  Identities=10%  Similarity=0.043  Sum_probs=142.3

Q ss_pred             CCChhhhhccccccc---cchhhHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHH
Q psy17685         98 HHSEKSQLYSDDTFL---QKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEE  174 (286)
Q Consensus        98 ~~~Ek~q~Lf~eaf~---GrVpNV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~  174 (286)
                      ..+++++.++..+..   |+|||++++|+++|+.+++|..+++.+.  +|.||+.+||+|++.+|..|+|.||+.+|.+.
T Consensus        33 ~a~~~~~~~~~~~~~~~~G~vpn~~~~la~~P~~l~a~~~l~~~l~--~~~L~~~~rELi~l~vS~~ngC~yC~~~H~~~  110 (207)
T 3lvy_A           33 TAPERVKETLRTVKKDNGGYIPNLIGLLANAPTALETYRTVGEINR--RNSLTPTEREVVQITAAVTNGCAFCVAGHTAF  110 (207)
T ss_dssp             TSCHHHHHHHHHHHHHTTSCCCHHHHHHTTSHHHHHHHHHHHHHHH--TSSSCHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHHHHHcCCCChHHHHHHHhCHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            567888888877643   9999999999999999999999998753  69999999999999999999999999999999


Q ss_pred             HH-hccCChhhhc----ccCC-CCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHH
Q psy17685        175 FL-SQGGDQDWLK----GLSY-APKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVF  248 (286)
Q Consensus       175 f~-~~gGDp~wl~----gl~~-ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~  248 (286)
                      .+ ..|.+++.+.    +-.. .++|+|++++|+..||..|..|+++++++|+++|||++||++++.++++|++.|++..
T Consensus       111 a~~~~G~~~e~i~a~r~~~~~~~~~~erA~l~~a~~lt~~~~~v~d~~~~~l~~agfsd~eivel~~~ia~~~~~n~~n~  190 (207)
T 3lvy_A          111 SIKQIQMAPDLLEALRNATPIDDDPKLDTLAKFTIAVINTKGRVGDEAFADFLEVGYTPENALDVVLGVSLASLCNYANN  190 (207)
T ss_dssp             HHHTTCCCHHHHHHHHHTCCCSSCHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHCCCCHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            98 7777775543    3222 4999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCcCC
Q psy17685        249 ACGVNEELDS  258 (286)
Q Consensus       249 G~Gi~pe~D~  258 (286)
                      ..|+.++...
T Consensus       191 ~~~~~~d~~~  200 (207)
T 3lvy_A          191 MADTPINPEL  200 (207)
T ss_dssp             HHTCCCCGGG
T ss_pred             HhCCCCChHH
Confidence            9999887553

>2gmy_A Hypothetical protein ATU0492; structural genomics, PSI, protein structure initiative; 1.60A {Agrobacterium tumefaciens str} SCOP: a.152.1.3

Probab=99.86  E-value=4.3e-21  Score=160.97  Aligned_cols=136  Identities=12%  Similarity=0.199  Sum_probs=123.5

Q ss_pred             HHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCChhhhccc------CCCCHH
Q psy17685        121 VMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGL------SYAPKK  194 (286)
Q Consensus       121 vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp~wl~gl------~~ip~K  194 (286)
                      .++++|+.+++|..+++.+.  +|+||..+||.|++.+|..|+|.||+.+|....+..|.+++-+..+      ...++|
T Consensus         7 ~~~~~P~~~~~~~~l~~~~~--~~~L~~~~rELv~l~vs~~ngC~yC~~~H~~~a~~~G~~~~~i~~l~~~~~~~~~~~~   84 (153)
T 2gmy_A            7 YAKASPEAFKAVMALENYVQ--SSGLEHRFIHLIKLRASIINGCAFCVDMHVKESRHDGLSEQWINLMSVWRESPVYTEQ   84 (153)
T ss_dssp             HHHHCHHHHHHHHHHHHHHH--TSSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHGGGGGGGCTTSCHH
T ss_pred             hHhhCHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCHHHHHHHhcccccCCCCHH
Confidence            47899999999999999984  6899999999999999999999999999999999999998755432      347999


Q ss_pred             HHHHHHHHHHHccCCC-CCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCCC
Q psy17685        195 LGLLYEVNKILAHRPW-LLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVNEELDSL  259 (286)
Q Consensus       195 lraL~~~n~~Lah~Pw-~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~Gi~pe~D~~  259 (286)
                      +|++++|+..+|..|- .+++++++.|++. ||++||++++.++++||+.||+..++|+.++.+..
T Consensus        85 e~A~l~~a~~lt~~~~~~v~d~~~~~l~~~-~s~~ei~el~~~ia~~n~~nr~~~~~~~~~~~~~~  149 (153)
T 2gmy_A           85 ERALLGWVDAVTKIAETGAPDDAFETLRAH-FSDEEIVKITVAIGAINTWNRIAVGFRSQHPVEAA  149 (153)
T ss_dssp             HHHHHHHHHHHHTHHHHCCCHHHHHHHHHH-SCHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCC-
T ss_pred             HHHHHHHHHHHHhcCCCCCCHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCchhh
Confidence            9999999999999984 8999999999975 99999999999999999999999999999876554

>2o4d_A Hypothetical protein PA0269; unknown function; 1.85A {Pseudomonas aeruginosa} SCOP: a.152.1.3 PDB: 2ijc_A

Probab=99.84  E-value=1.2e-20  Score=161.08  Aligned_cols=132  Identities=14%  Similarity=0.204  Sum_probs=121.1

Q ss_pred             HHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCChhhhccc------CCCCHH
Q psy17685        121 VMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGL------SYAPKK  194 (286)
Q Consensus       121 vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp~wl~gl------~~ip~K  194 (286)
                      +++.+|+.+++|..++..+.  +|.||..+||.|++.+|..|+|.||+.+|....+..|.+++-+..+      ...++|
T Consensus        27 ~~~~~P~~~~~~~~l~~~l~--~~~L~~~~rELi~l~vS~~ngC~yC~~~H~~~a~~~G~s~e~i~~l~~~~~~~~~~~~  104 (165)
T 2o4d_A           27 WAKASPDAYAAMLGLEKALA--KAGLERPLIELVYLRTSQINGCAYCVNMHANDARKAGETEQRLQALCVWQETPYFTPR  104 (165)
T ss_dssp             HHHHCHHHHHHHHHHHHHHH--HSSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHGGGGGGCSCSCHH
T ss_pred             HHhhCHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCHHHHHHHHhccccCCCCHH
Confidence            48899999999999999985  6899999999999999999999999999999999999998755322      247999


Q ss_pred             HHHHHHHHHHHccCC-CCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy17685        195 LGLLYEVNKILAHRP-WLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVNEE  255 (286)
Q Consensus       195 lraL~~~n~~Lah~P-w~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~Gi~pe  255 (286)
                      +|++++|+..+|..| -.++++++++|++ .||++||++++.++++||++||+..++|+.|+
T Consensus       105 erA~l~~a~~lt~~~~~~v~d~~~~~l~~-~fsd~eivel~~~ia~~n~~NRl~~~l~~~~~  165 (165)
T 2o4d_A          105 ERAALAWTEQLARLSQGALPHGLLDELRE-HFDDKEIAELTLAVSAINAWNRFGVGMGMQPE  165 (165)
T ss_dssp             HHHHHHHHHHHHTGGGSCCCTTHHHHHTT-TSCHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHHHHHHHHHhCcCCCCCHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            999999999999998 5899999999996 59999999999999999999999999999875

>2ouw_A Alkylhydroperoxidase AHPD core; YP_425393.1, carboxymuconolactone decarboxylase family, structural genomics, joint for structural genomics; 1.95A {Rhodospirillum rubrum} SCOP: a.152.1.4

Probab=99.74  E-value=1.5e-17  Score=136.58  Aligned_cols=113  Identities=15%  Similarity=0.183  Sum_probs=100.0

Q ss_pred             hhhhhccccccc----cchhhHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHH
Q psy17685        101 EKSQLYSDDTFL----QKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFL  176 (286)
Q Consensus       101 Ek~q~Lf~eaf~----GrVpNV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~  176 (286)
                      ++++.++.....    |+|||++++|+++|+.+++|+..+..++..+|.||..+||+|++.+|..|+|.||+.+|.... 
T Consensus        17 ~~~~~~~~~~~~~~g~g~vpn~~~~la~~P~~~~~~~~~~~~~~~~~~~L~~~~~Eli~l~vs~~n~C~yC~~~H~~~a-   95 (138)
T 2ouw_A           17 PEVKAVFDDIRATRGSDFVNNIWRGLANDPALLKRTWEQVKTVMVGEGALDPLTREMIYLAVSTANSCSYCAHSHTAAA-   95 (138)
T ss_dssp             HHHHHHHHHHHHHHSSSCCCHHHHHHTTSHHHHHHHHHHHHHHHSSSSSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHCCCCChHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH-
Confidence            566666655432    499999999999999999999999999988899999999999999999999999999999733 


Q ss_pred             hccCChhhhcccCCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy17685        177 SQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVNEEL  256 (286)
Q Consensus       177 ~~gGDp~wl~gl~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~Gi~pe~  256 (286)
                                                                  ++.|.|.+||.+++.++++|+.+|+++.++|+.++.
T Consensus        96 --------------------------------------------~~~G~s~eei~~l~~~~~~~~~~nrl~~~l~~~~d~  131 (138)
T 2ouw_A           96 --------------------------------------------RAKGMTPAQHAEVLAIIGLAAQTNALVTAMQIPVDE  131 (138)
T ss_dssp             --------------------------------------------HHTTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCCCG
T ss_pred             --------------------------------------------HHcCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence                                                        457899999999999999999999999999998876


Q ss_pred             CC
Q psy17685        257 DS  258 (286)
Q Consensus       257 D~  258 (286)
                      ..
T Consensus       132 ~~  133 (138)
T 2ouw_A          132 AF  133 (138)
T ss_dssp             GG
T ss_pred             HH
Confidence            53

>2cwq_A Hypothetical protein TTHA0727; conserved hypothetical protein, all alpha, structural genomi NPPSFA; 1.90A {Thermus thermophilus} SCOP: a.152.1.4

Probab=99.40  E-value=5.7e-13  Score=110.74  Aligned_cols=106  Identities=16%  Similarity=0.090  Sum_probs=89.5

Q ss_pred             Chhhhhccccccc--c-chhhHHHHHh-cCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHH
Q psy17685        100 SEKSQLYSDDTFL--Q-KLDHVTQVMG-YHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEF  175 (286)
Q Consensus       100 ~Ek~q~Lf~eaf~--G-rVpNV~~vla-~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f  175 (286)
                      +++.+.++.++..  | ++||++..++ ..|+.++.+.......+..+|.|++.+||+|++.+|..|+|.||+..|... 
T Consensus        22 ~~~~~~~l~~~~~~~G~~vpn~~~~l~~~~P~~l~~~~~~~~~~~~~~g~Ld~k~reLI~lavs~~ngC~~Cl~~H~~~-  100 (137)
T 2cwq_A           22 DRTHERVLQAMAENLGEGLPRAIPLLAEKAPGLLLEHGRSWTYAMPEKGALDEKTRTLILLGIALATGSEACVKAMAHR-  100 (137)
T ss_dssp             SSSSHHHHHHHHHHHGGGCCTHHHHHHHHCHHHHHHHHHHHHHHSCTTCSSCHHHHHHHHHHHHHHHTCHHHHHHHHHH-
T ss_pred             CHHHHHHHHHHHHHHhhhhHHHHHHHHHHCHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH-
Confidence            4566667766655  9 9999999988 999999955443333335788999999999999999999999999999866 


Q ss_pred             HhccCChhhhcccCCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhc
Q psy17685        176 LSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFAC  250 (286)
Q Consensus       176 ~~~gGDp~wl~gl~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~  250 (286)
                                                                  +++.|.|.+||.+++.+.+.+...+.++.+.
T Consensus       101 --------------------------------------------A~~~G~t~eeI~eal~~a~~~~g~~~~~~~~  131 (137)
T 2cwq_A          101 --------------------------------------------AKRLGLSKEALLETLKIARQAQANAVLGHAA  131 (137)
T ss_dssp             --------------------------------------------HHHHTCCHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred             --------------------------------------------HHHcCCCHHHHHHHHHHHHHHHhhHHHHHHH
Confidence                                                        5668999999999999999999999998764

>2qeu_A Putative carboxymuconolactone decarboxylase; YP_555818.1, carboxymuconolactone decarboxylase family; HET: CIT GOL; 1.65A {Burkholderia xenovorans}

Probab=99.20  E-value=3.2e-11  Score=100.33  Aligned_cols=93  Identities=15%  Similarity=0.244  Sum_probs=82.5

Q ss_pred             cchhhHHHHH-hcCcHHHHHHHHHHHHhhc---CCCCCCHHHHHHHHHHhhccCCcc-hHHHHHHHHHHhccCChhhhcc
Q psy17685        113 QKLDHVTQVM-GYHPTYLNIFLRTQNYIMR---GDGPLSYEYRHYIAIMAAGRHQCS-YLINLQKEEFLSQGGDQDWLKG  187 (286)
Q Consensus       113 GrVpNV~~vl-a~~P~yL~~f~~~~~~Lm~---~~g~Lp~~eReyIAImaSa~n~C~-Ycv~~H~a~f~~~gGDp~wl~g  187 (286)
                      |+|||.+..+ ...|+.+++|..++..++.   .+|.|+...||+|++.+| .|+|. ||+..|...             
T Consensus        26 G~vP~~~~~l~~~~P~~~~~~~~l~~~~~~~~~~~~~Ld~k~reLI~lavs-~ngC~~~Cl~~H~~~-------------   91 (141)
T 2qeu_A           26 GGLPEALVQLAEYAPETFDAYSRMRTTMLKSEADGAKLPLKYKHLILVVLD-AIRDEPIGIVNHTRA-------------   91 (141)
T ss_dssp             SSCCHHHHHHHHHCHHHHHHHHHHHHHHTCCGGGTCSSCHHHHHHHHHHHH-HHHTCHHHHHHHHHH-------------
T ss_pred             ccchHHHHHHHHhCHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHH-HhCCCHHHHHHHHHH-------------
Confidence            9999988655 5999999999999988862   478899999999999999 99999 999999975             


Q ss_pred             cCCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhcC
Q psy17685        188 LSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACG  251 (286)
Q Consensus       188 l~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~G  251 (286)
                                                      +++.|.|..||.+++.+++.+.....+..+..
T Consensus        92 --------------------------------A~~~G~t~eeI~eai~~a~~~~G~p~~~~a~~  123 (141)
T 2qeu_A           92 --------------------------------AMNAGLSVDELIEGILLGIIVYGMPAWGKTGR  123 (141)
T ss_dssp             --------------------------------HHHTTCCHHHHHHHHHHHHHHHCTHHHHTTHH
T ss_pred             --------------------------------HHHcCCCHHHHHHHHHHHHHHcchHHHHHHHH
Confidence                                            36689999999999999999988888777665

>3bey_A Conserved protein O27018; TT217, NESG, structural genomics, PSI-2, PROT structure initiative; 2.40A {Methanothermobacter thermautotrophicusorganism_taxid}

Probab=99.13  E-value=2.9e-10  Score=87.70  Aligned_cols=65  Identities=15%  Similarity=0.203  Sum_probs=54.2

Q ss_pred             hhHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCC
Q psy17685        116 DHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGD  181 (286)
Q Consensus       116 pNV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGD  181 (286)
                      +|+.++++.+|+.+++|..++..++ .+|+||..+||.|++.+|..|+|.||+..|....+..|-+
T Consensus         3 ~~l~~~~~~~P~~~~~~~~l~~~~~-~~~~L~~~~reLi~l~vs~~ngc~~c~~~H~~~a~~~G~t   67 (96)
T 3bey_A            3 TGADRFLEELPEVAESFKNFREAVR-SEGKLTEREKLLISVACSVAVRCDACTRRHAEEALEAGIT   67 (96)
T ss_dssp             ----CTGGGCHHHHHHHHHHHHHHH-TCSSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTTCC
T ss_pred             hHHHHHHHHCHHHHHHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence            6788889999999999999999987 5688999999999999999999999999998766644433

>3d7i_A Carboxymuconolactone decarboxylase family protein; 1591455, structural genomics, JOI for structural genomics, JCSG; HET: MSE PG4; 1.75A {Methanocaldococcus jannaschii}

Probab=99.11  E-value=4.5e-10  Score=88.39  Aligned_cols=91  Identities=16%  Similarity=0.232  Sum_probs=79.2

Q ss_pred             hhHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCChhhhcccCCCCHHH
Q psy17685        116 DHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKL  195 (286)
Q Consensus       116 pNV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp~wl~gl~~ip~Kl  195 (286)
                      +++....+..|+.++.|.+++..++ .++.||..+||+|++.+|..|+|.||+..|...                     
T Consensus        10 ~~~~~~~~~~P~~~~~~~~l~~~~~-~~~~L~~k~reLi~lavs~~~gc~~cl~~H~~~---------------------   67 (105)
T 3d7i_A           10 EGMKVVAAAYPDLYDIIVKLNDTVF-TGKTLDYKTQKLIAIGIVASRCDEVAIEKQMKS---------------------   67 (105)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHHHHHT-SCSSSCHHHHHHHHHHHHHTSSCHHHHHHHHHH---------------------
T ss_pred             HHHHHHHHhCHHHHHHHHHHHHHHH-cCCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH---------------------
Confidence            5677888999999999999988886 457899999999999999999999999999866                     


Q ss_pred             HHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhcC
Q psy17685        196 GLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACG  251 (286)
Q Consensus       196 raL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~G  251 (286)
                                             ++++.|.|.+||.+++.+++.|....+...+..
T Consensus        68 -----------------------A~~~~G~t~eei~e~~~~~~~~~G~p~~~~a~~  100 (105)
T 3d7i_A           68 -----------------------AMKELGITKEEIADVLRVVLLTSGMPAFTKAMK  100 (105)
T ss_dssp             -----------------------HHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             -----------------------HHHHcCCCHHHHHHHHHHHHHHCcHHHHHHHHH
Confidence                                   332689999999999999999988888777654

>1p8c_A Conserved hypothetical protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Thermotoga maritima} SCOP: a.152.1.2

Probab=98.90  E-value=7.8e-09  Score=87.12  Aligned_cols=86  Identities=14%  Similarity=0.154  Sum_probs=72.8

Q ss_pred             hHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCChhhhcccCCCCHHHH
Q psy17685        117 HVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLG  196 (286)
Q Consensus       117 NV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp~wl~gl~~ip~Klr  196 (286)
                      .+.++++..|+.+++|..++..++ .++.|+..+||+|++.+|..|+|.||+..|...                      
T Consensus        35 ~~~~l~~~~P~~~~~~~~l~~~i~-~~~~Ld~k~rELI~Lavs~~ngC~~cl~~H~~~----------------------   91 (145)
T 1p8c_A           35 LNEKVLSRGTLNTKRFFNLDSAVY-RPGKLDVKTKELMGLVASTVLRCDDCIRYHLVR----------------------   91 (145)
T ss_dssp             HHHHHHHHSCHHHHHHHHHHHHTT-SCSSSCHHHHHHHHHHHHHHTTCHHHHHHHHHH----------------------
T ss_pred             HHHHHHHhCHHHHHHHHHHHHHHH-ccCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH----------------------
Confidence            346678899999999999988887 567899999999999999999999999999973                      


Q ss_pred             HHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHH
Q psy17685        197 LLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVF  248 (286)
Q Consensus       197 aL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~  248 (286)
                                             .++.|.|.+||.+++.+++.|.....+..
T Consensus        92 -----------------------A~~~G~T~eEI~eal~~a~~~~G~pa~~~  120 (145)
T 1p8c_A           92 -----------------------CVQEGASDEEIFEALDIALVVGGSIVIPH  120 (145)
T ss_dssp             -----------------------HHTTSCCHHHHHHHHHHHHHHHCGGGHHH
T ss_pred             -----------------------HHHcCCCHHHHHHHHHHHHHHcCcchhhH
Confidence                                   55688888888888888888876654443

>1vke_A Carboxymuconolactone decarboxylase family protein; TM1620, structural genomics, JC protein structure initiative, PSI; 1.56A {Thermotoga maritima} SCOP: a.152.1.2

Probab=98.79  E-value=2.2e-08  Score=83.17  Aligned_cols=62  Identities=13%  Similarity=0.262  Sum_probs=53.3

Q ss_pred             HHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCCh
Q psy17685        120 QVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQ  182 (286)
Q Consensus       120 ~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp  182 (286)
                      ++++..|+.+++|..++..++ .+|.||..+||+|++.+|..|+|.||+..|...-+..|-.+
T Consensus        28 ~l~~~~P~~~~a~~~l~~~i~-~~~~Ld~k~rELI~Lavs~~ngC~yCl~~H~~~A~~~G~t~   89 (133)
T 1vke_A           28 KVLSRGTLNTKRFFNLDSAVY-RPGKLDVKTKELMGLVASTVLRCDDCIRYHLVRCVQEGASD   89 (133)
T ss_dssp             HC-CCSCHHHHHHHHHHHHTT-SCSSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCH
T ss_pred             HHHHhCHHHHHHHHHHHHHHH-ccCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCH
Confidence            558899999999999998887 56889999999999999999999999999996666555444

>2q0t_A Putative gamma-carboxymuconolactone decarboxylase; AHPD-like fold, structural genomics, joint center for struct genomics, JCSG; 1.70A {Burkholderia xenovorans} SCOP: a.152.1.1

Probab=98.79  E-value=3.3e-08  Score=89.08  Aligned_cols=148  Identities=14%  Similarity=0.082  Sum_probs=109.4

Q ss_pred             hhhhccccccc--cchhhHHHHHh-cCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhh--ccCCcchHHHHHHHHHH
Q psy17685        102 KSQLYSDDTFL--QKLDHVTQVMG-YHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAA--GRHQCSYLINLQKEEFL  176 (286)
Q Consensus       102 k~q~Lf~eaf~--GrVpNV~~vla-~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaS--a~n~C~Ycv~~H~a~f~  176 (286)
                      +.+.++.+...  |++||.+..+. ..|+.++.|...+..++. ++.|+..+||+|++.+|  ..|+|.||+..|...-+
T Consensus        10 ~~~~~~~~~~~~~G~~~~~~~~~~~~~P~~~~~~~~~~~~~~~-~~~L~~~~reLi~la~~~a~~n~c~~cl~~H~~~a~   88 (263)
T 2q0t_A           10 DPSRLRDELVRLHGKASPEWDSLVRLDPRFVDAYLKFAGVPQR-RNHLDDKTRAFIALAADACATQLYAPGVARHIERAL   88 (263)
T ss_dssp             CHHHHHHHHHHHHSSCCHHHHHHHHHCHHHHHHHHHHHHHHHH-HCSSCHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhcchhHHHHHHHHhCHHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHcccCCHHHHHHHHHHHH
Confidence            44555555444  99888777766 999999999999888774 56799999999999999  56699999999997766


Q ss_pred             hccCCh-----------------------------------------------------------------------hhh
Q psy17685        177 SQGGDQ-----------------------------------------------------------------------DWL  185 (286)
Q Consensus       177 ~~gGDp-----------------------------------------------------------------------~wl  185 (286)
                      ..|-.+                                                                       +..
T Consensus        89 ~~G~t~~ei~e~~~~a~~~g~~~~~~al~~~~~v~~~~~~~~~~~~~d~r~e~~~~~~~e~~G~~~~~~~~~~~~~P~~~  168 (263)
T 2q0t_A           89 SFGATREELIEVLELVSTIGIHTSNVGVPVLLEVLEEEGLRKGAPPLDERRQKLKAEFETNRGYWHPTWEGLLELDPDLF  168 (263)
T ss_dssp             HTTCCHHHHHHHHHHHGGGGGHHHHHHHHHHHHHHHHTTSCCSCCCCCHHHHHHHHHHHHHHSCCCHHHHHHHHHCHHHH
T ss_pred             HcCCCHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHhCCccHHHHHHHHHCHHHH
Confidence            544221                                                                       000


Q ss_pred             c-------c---cCCCCHHHHHHHHHHHHHcc--CCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhcC
Q psy17685        186 K-------G---LSYAPKKLGLLYEVNKILAH--RPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACG  251 (286)
Q Consensus       186 ~-------g---l~~ip~KlraL~~~n~~Lah--~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~G  251 (286)
                      +       +   -..+|+|.|.|..++...+.  .-..--+.|++..++.|.|.+||.+++.+..+... .+...|..
T Consensus       169 ~~~~~~~~~~~~~~~L~~k~reLi~la~~~a~~~gc~~cl~~H~~~a~~~G~t~eei~e~~~~a~~~G~-~~a~~a~~  245 (263)
T 2q0t_A          169 EAYVEFSSVPWRTGVLSPKIKEFMYCAFDASATHLYVPGLKLHIRNALRYGATAEELMELLEIVSVTGI-HGAELGAP  245 (263)
T ss_dssp             HHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHGGGGG-HHHHHHHH
T ss_pred             HHHHHHHhccccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc-cHHHHHHH
Confidence            0       0   13588999999999988775  55555678899999999999999999966655433 33444443

>2q0t_A Putative gamma-carboxymuconolactone decarboxylase; AHPD-like fold, structural genomics, joint center for struct genomics, JCSG; 1.70A {Burkholderia xenovorans} SCOP: a.152.1.1

Probab=98.38  E-value=5.7e-07  Score=80.93  Aligned_cols=95  Identities=11%  Similarity=0.026  Sum_probs=77.9

Q ss_pred             cchhhHHHHHh-cCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHh--hccCCcchHHHHHHHHHHhccCChhhhcc--
Q psy17685        113 QKLDHVTQVMG-YHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMA--AGRHQCSYLINLQKEEFLSQGGDQDWLKG--  187 (286)
Q Consensus       113 GrVpNV~~vla-~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAIma--Sa~n~C~Ycv~~H~a~f~~~gGDp~wl~g--  187 (286)
                      |.+||+++.+. ..|+.++.|.++...++ .++.|+..+||+|++.+  |..|+|.||+..|...-+..|-.++-+..  
T Consensus       151 G~~~~~~~~~~~~~P~~~~~~~~~~~~~~-~~~~L~~k~reLi~la~~~a~~~gc~~cl~~H~~~a~~~G~t~eei~e~~  229 (263)
T 2q0t_A          151 GYWHPTWEGLLELDPDLFEAYVEFSSVPW-RTGVLSPKIKEFMYCAFDASATHLYVPGLKLHIRNALRYGATAEELMELL  229 (263)
T ss_dssp             SCCCHHHHHHHHHCHHHHHHHHHHHHHHH-HHCCSCHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred             CCccHHHHHHHHHCHHHHHHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence            99999999886 89999999999887766 67889999999999999  66789999999999999999988866532  


Q ss_pred             ----cCCCCHHHHHHHHHHHHHccC
Q psy17685        188 ----LSYAPKKLGLLYEVNKILAHR  208 (286)
Q Consensus       188 ----l~~ip~KlraL~~~n~~Lah~  208 (286)
                          ....|.-..++.-+.+.+..+
T Consensus       230 ~~a~~~G~~~a~~a~~~~~~v~~~~  254 (263)
T 2q0t_A          230 EIVSVTGIHGAELGAPLLEAALKRS  254 (263)
T ss_dssp             HHHGGGGGHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHhCccHHHHHHHHHHHHHHhc
Confidence                234566666666666666554

>2af7_A Gamma-carboxymuconolactone decarboxylase; O26336_metth, NESG, TT747, structural genomics, PSI, protein structure initiative; 2.81A {Methanothermobacterthermautotrophicus} SCOP: a.152.1.2

Probab=97.97  E-value=7.4e-06  Score=66.30  Aligned_cols=83  Identities=11%  Similarity=0.024  Sum_probs=63.9

Q ss_pred             HhcCcHHHHHHHHH-HHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCChhhhccc-----C-CCCHH
Q psy17685        122 MGYHPTYLNIFLRT-QNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGL-----S-YAPKK  194 (286)
Q Consensus       122 la~~P~yL~~f~~~-~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp~wl~gl-----~-~ip~K  194 (286)
                      -...|+.++.|... +..++. .+.|+..+||+|++.+|..++|.||+..|...-+..|-.++-+..+     . .-.||
T Consensus        27 ~~~~P~~~~~~~~~~~~~~~~-~~~L~~k~reLi~la~~~~~gc~~cl~~H~~~a~~~G~t~~ei~e~~~~~~~~~G~p~  105 (125)
T 2af7_A           27 EDVAPDLARFVAEFAYGDVYS-RGVLDLKTRELLTLAALTVLRADDQLKSHVRGALNAGCSKDEIIEVMIQMAVYAGFPA  105 (125)
T ss_dssp             HHHCHHHHHHHHHTCCCCCCT-CCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTCHHH
T ss_pred             HHhCHHHHHHHHHHhcccccc-CCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCHHH
Confidence            34689999988886 677664 4569999999999999999999999999999999999888666421     1 12356


Q ss_pred             HHHHHHHHHHH
Q psy17685        195 LGLLYEVNKIL  205 (286)
Q Consensus       195 lraL~~~n~~L  205 (286)
                      ..+...+++.+
T Consensus       106 ~~~a~~~~~~v  116 (125)
T 2af7_A          106 AINAVLAAKEV  116 (125)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            65665555444

>1gu9_A Alkylhydroperoxidase D; oxidoreductase; 1.9A {Mycobacterium tuberculosis} SCOP: a.152.1.1 PDB: 1knc_A 1me5_A 1lw1_A

Probab=97.87  E-value=8.7e-06  Score=71.09  Aligned_cols=44  Identities=9%  Similarity=0.144  Sum_probs=39.7

Q ss_pred             CCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCChhhh
Q psy17685        142 GDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWL  185 (286)
Q Consensus       142 ~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp~wl  185 (286)
                      .+|+||+..||+|++.+|..|+|.||+.+|....+..|.+++-+
T Consensus       108 ~~~~Ld~~~kELI~LaVSqiNgC~yCv~~Ht~~a~~~G~s~e~I  151 (177)
T 1gu9_A          108 ANPGIPKANFELWSFAVSAINGCSHCLVAHEHTLRTVGVDREAI  151 (177)
T ss_dssp             HCCSSCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred             ccCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCHHHH
Confidence            46899999999999999999999999999999999988776444

>3bjx_A Halocarboxylic acid dehalogenase DEHI; plasmid, hydrolase; 2.30A {Pseudomonas putida}

Probab=97.76  E-value=6.1e-07  Score=84.53  Aligned_cols=76  Identities=12%  Similarity=-0.011  Sum_probs=68.6

Q ss_pred             CCChhhhhccccccc----cchhhHHHHHhcCcHHHHHHHH-HHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHH
Q psy17685         98 HHSEKSQLYSDDTFL----QKLDHVTQVMGYHPTYLNIFLR-TQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQK  172 (286)
Q Consensus        98 ~~~Ek~q~Lf~eaf~----GrVpNV~~vla~~P~yL~~f~~-~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~  172 (286)
                      ..|+++++++.++..    ..|+|..|+|+.+|+||+.-++ .-..+| .+|.|...-||+|+++++..|+|.||+..|.
T Consensus       180 eas~~v~aV~~DIr~t~~~~~vns~~RaLA~wP~~L~~~W~~~LKpv~-~~g~ld~l~~eii~~Avs~~~g~~y~~~~~~  258 (311)
T 3bjx_A          180 KASTEVQGLLKRVADLHYHHGPASDFQALANWPKVLQIVTDEVLAPVA-RTEQYDAKSRELVTRARELVRGLPGSAGVQR  258 (311)
T ss_dssp             GSCHHHHHHHHHHHHHTTCSSCCHHHHHHTTSHHHHHHHHHTTTTTTT-TSHHHHHHHHHHHHHHHHHHHTCSSBCSCCG
T ss_pred             hcCHHHHHHHHHHHHHhCCCCcccHHHHHhcChHHHHHHHHHHHHHHh-cchhhhHHHHHHHHHHHHHHhCCCCccccCH
Confidence            678899999999854    8899999999999999999994 778888 7789999999999999999999999999887


Q ss_pred             HH
Q psy17685        173 EE  174 (286)
Q Consensus       173 a~  174 (286)
                      ++
T Consensus       259 aa  260 (311)
T 3bjx_A          259 SE  260 (311)
T ss_dssp             GG
T ss_pred             HH
Confidence            55

>1gu9_A Alkylhydroperoxidase D; oxidoreductase; 1.9A {Mycobacterium tuberculosis} SCOP: a.152.1.1 PDB: 1knc_A 1me5_A 1lw1_A

Probab=97.64  E-value=0.00044  Score=60.26  Aligned_cols=126  Identities=15%  Similarity=0.018  Sum_probs=101.3

Q ss_pred             HhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCCh-------------------
Q psy17685        122 MGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQ-------------------  182 (286)
Q Consensus       122 la~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp-------------------  182 (286)
                      -..-|+|.+-+.--...+++ ++.|+..++..|++.+|...+|.+|+..|.++... +.++                   
T Consensus         7 k~~~p~~akd~~lnl~~~~~-~~~Ls~~~~~g~~lA~A~a~~~~~~~~~~~~~a~~-~ls~e~~~~a~~aas~MamnNv~   84 (177)
T 1gu9_A            7 KAALPEYAKDIKLNLSSITR-SSVLDQEQLWGTLLASAAATRNPQVLADIGAEATD-HLSAAARHAALGAAAIMGMNNVF   84 (177)
T ss_dssp             HHHCCGGGHHHHHHHHHHHT-CSSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT-TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhCHHHHHHHHHHHHhhhc-cCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHc-cCCHHHHHHHHHHHHHHHhhhhh
Confidence            34579999988877777775 78999999999999999999999999999977764 3222                   


Q ss_pred             ---------hhh---ccc-------CCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHH
Q psy17685        183 ---------DWL---KGL-------SYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSL  243 (286)
Q Consensus       183 ---------~wl---~gl-------~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl  243 (286)
                               ++-   .++       ..+|+|++.|..+..=...+=.-.-..|...+++.|.|.++|.+++-|.+..+..
T Consensus        85 yr~~~m~~~~y~~~p~~lr~~~l~~~~Ld~~~kELI~LaVSqiNgC~yCv~~Ht~~a~~~G~s~e~I~eal~vA~~~~g~  164 (177)
T 1gu9_A           85 YRGRGFLEGRYDDLRPGLRMNIIANPGIPKANFELWSFAVSAINGCSHCLVAHEHTLRTVGVDREAIFEALKAAAIVSGV  164 (177)
T ss_dssp             HHHHHHTTTTTTTSCCCCCCHHHHCCSSCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhchhhHHHhHHHHHHHHhccCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhhH
Confidence                     220   011       2488999888888777666666666778888999999999999999999999998


Q ss_pred             HHHHHh
Q psy17685        244 ASFVFA  249 (286)
Q Consensus       244 ~~fv~G  249 (286)
                      ...+.+
T Consensus       165 ~~~~~~  170 (177)
T 1gu9_A          165 AQALAT  170 (177)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888776

>4g9q_A 4-carboxymuconolactone decarboxylase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.77A {Sinorhizobium meliloti}

Probab=97.06  E-value=0.012  Score=54.07  Aligned_cols=111  Identities=13%  Similarity=0.068  Sum_probs=84.8

Q ss_pred             HHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCCh---------------------------------
Q psy17685        136 QNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQ---------------------------------  182 (286)
Q Consensus       136 ~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp---------------------------------  182 (286)
                      |..+... +.|+..+|++|.|.+.+..+|..|+..|-..-+..|-.+                                 
T Consensus        62 fG~vw~r-~~Ld~k~R~Litla~l~A~g~~~~l~~H~~~Al~~G~T~~EI~Evl~q~~~Y~G~P~a~~a~~~~~ev~~er  140 (269)
T 4g9q_A           62 YGDVWQR-PGLNRRDRSLVTIAALIARGEAPALTYYADQALENGVKPSEISETITHLAYYSGWGKAMATVGPVSEAFAKR  140 (269)
T ss_dssp             TTTGGGC-TTSCHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHTTCCHHHHHHHHHHHHHHTCHHHHHTTHHHHHHHHHHT
T ss_pred             hhcccCC-CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHc
Confidence            3344444 569999999999999999999999999997776665331                                 


Q ss_pred             -----------------------------------------hhhc--------ccCCCCHHHHHHHHHHHHHccCCCCCC
Q psy17685        183 -----------------------------------------DWLK--------GLSYAPKKLGLLYEVNKILAHRPWLLN  213 (286)
Q Consensus       183 -----------------------------------------~wl~--------gl~~ip~KlraL~~~n~~Lah~Pw~I~  213 (286)
                                                               +|+.        .-..+++|.|.|..++.+.+..-..--
T Consensus       141 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~aP~~~~~~~~~~fGdi~~r~~L~~k~ReLitia~l~a~g~~~ql  220 (269)
T 4g9q_A          141 GIGQDQLAAVESTPLPLDEEAEAQRATTVGNQFGSVAPGLVQYTTDYLFRDLWLRPDLAPRDRSLVTIAALISVGQVEQI  220 (269)
T ss_dssp             TCCGGGSCCSSCCCCCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTTTGGGCTTSCHHHHHHHHHHHHHHTTCGGGH
T ss_pred             CCCCCccccCcccccchhHHHHHHHHHHHHHHHHHhCHHHHHHHHHHhhhhHHhccCccHhHHHHHHHHHHHHCCChHHH
Confidence                                                     0000        014589999999999999997655445


Q ss_pred             HHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHH
Q psy17685        214 PSHLQKLTKNGWSLGELCHALVLLVNFHSLASFV  247 (286)
Q Consensus       214 ~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv  247 (286)
                      +-|+...++.|-|.+||.+++..++.|--..+..
T Consensus       221 ~~Hi~~Al~~G~T~eEi~Evi~~~a~y~G~P~a~  254 (269)
T 4g9q_A          221 TFHLNKALDNGLSEEQAAEVITHLAFYAGWPNAM  254 (269)
T ss_dssp             HHHHHHHHHTTCCHHHHHHHHHHHHHHHCHHHHH
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHhCCHHHHH
Confidence            6888888889999999999999999985443333

>3bjx_A Halocarboxylic acid dehalogenase DEHI; plasmid, hydrolase; 2.30A {Pseudomonas putida}

Probab=96.76  E-value=0.0011  Score=62.50  Aligned_cols=103  Identities=16%  Similarity=0.109  Sum_probs=73.9

Q ss_pred             hhccCCChhhhhccccccc----cchhhHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHH
Q psy17685         94 LKEFHHSEKSQLYSDDTFL----QKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLIN  169 (286)
Q Consensus        94 L~~~~~~Ek~q~Lf~eaf~----GrVpNV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~  169 (286)
                      +.+-..|..++.+|.|+..    ..|+|++|+++.+|.+|+..|+..+-+| ..+.+-..-++ |-+. |..|.  ||+ 
T Consensus        25 v~e~eAs~ev~~VydDIr~T~~vp~Vn~~wRalA~~P~fL~~aW~~lKp~m-~t~~~e~~a~e-lr~a-s~~~~--~~i-   98 (311)
T 3bjx_A           25 LSQLDVSGEMESTYEDIRLTLRVPWVAFGCRVLATFPGYLPLAWRRSAEAL-ITRYAEQAADE-LRER-SLLNI--GPL-   98 (311)
T ss_dssp             CCTTTCCHHHHHHHHHHHHHHTCSSCCHHHHHHTTSTTHHHHHHHHHTTGG-GBHHHHHHHHH-HHHH-TCCCC--CSC-
T ss_pred             CChhhcCHHHHHHHHHHHHHhCCCchhHHHHHHhcCchHHHHHHHHHHHHh-cchhHHHHHHH-HHHH-hcccC--CCC-
Confidence            3345677888899999865    8999999999999999999999989888 33333222222 2222 33333  444 


Q ss_pred             HHHHHHHhccCChhhhcccCCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHH
Q psy17685        170 LQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASF  246 (286)
Q Consensus       170 ~H~a~f~~~gGDp~wl~gl~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~f  246 (286)
                                                                  ..+-.+|++.|||.+|+-++..++..|+..|.-
T Consensus        99 --------------------------------------------~~~t~alra~G~t~ae~~el~avv~~fn~~Np~  131 (311)
T 3bjx_A           99 --------------------------------------------PNLKERLYAAGFDDGEIEKVRRVLYAFNYGNPK  131 (311)
T ss_dssp             --------------------------------------------CCHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------------------------------------------CCchHHHHHcCCCHHHHHHHHHHHHHHHhhhHH
Confidence                                                        334456677899999999999999998888764

>4g9q_A 4-carboxymuconolactone decarboxylase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.77A {Sinorhizobium meliloti}

Probab=91.06  E-value=0.78  Score=42.07  Aligned_cols=64  Identities=11%  Similarity=0.082  Sum_probs=52.7

Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy17685        189 SYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGV  252 (286)
Q Consensus       189 ~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~Gi  252 (286)
                      ..++.|.|.|..++...|..-+.-=+.|+...++.|.|..||.+++..++.|--..+...++++
T Consensus        69 ~~Ld~k~R~Litla~l~A~g~~~~l~~H~~~Al~~G~T~~EI~Evl~q~~~Y~G~P~a~~a~~~  132 (269)
T 4g9q_A           69 PGLNRRDRSLVTIAALIARGEAPALTYYADQALENGVKPSEISETITHLAYYSGWGKAMATVGP  132 (269)
T ss_dssp             TTSCHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHTTCCHHHHHHHHHHHHHHTCHHHHHTTHHH
T ss_pred             CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence            5699999999999999998766555688888888999999999999998888655555555433

>2af7_A Gamma-carboxymuconolactone decarboxylase; O26336_metth, NESG, TT747, structural genomics, PSI, protein structure initiative; 2.81A {Methanothermobacterthermautotrophicus} SCOP: a.152.1.2

Probab=87.77  E-value=1.3  Score=35.11  Aligned_cols=65  Identities=14%  Similarity=0.091  Sum_probs=52.9

Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy17685        189 SYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVN  253 (286)
Q Consensus       189 ~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~Gi~  253 (286)
                      ..+|+|.|.|..++...+..-..--..|+...++.|.|..||.+++.+++.+....+...+..+-
T Consensus        49 ~~L~~k~reLi~la~~~~~gc~~cl~~H~~~a~~~G~t~~ei~e~~~~~~~~~G~p~~~~a~~~~  113 (125)
T 2af7_A           49 GVLDLKTRELLTLAALTVLRADDQLKSHVRGALNAGCSKDEIIEVMIQMAVYAGFPAAINAVLAA  113 (125)
T ss_dssp             CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence            35999999999999999986554556899999999999999999999988876666666555443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	286
d2oyoa1	186	a.152.1.3 (A:10-195) Uncharacterized protein Dgeo_	1e-07
d2ouwa1	134	a.152.1.4 (A:1-134) Hypothetical protein Rru_A0301	0.002
d1vkea_	118	a.152.1.2 (A:) Hypothetical protein TM1620 {Thermo	0.002

>d2oyoa1 a.152.1.3 (A:10-195) Uncharacterized protein Dgeo_1446 {Deinococcus geothermalis [TaxId: 68909]} Length = 186

class: All alpha proteins
fold: AhpD-like
superfamily: AhpD-like
family: Atu0492-like
domain: Uncharacterized protein Dgeo 1446
species: Deinococcus geothermalis [TaxId: 68909]

 Score = 48.7 bits (115), Expect = 1e-07
 Identities = 20/144 (13%), Positives = 49/144 (34%), Gaps = 6/144 (4%)

Query: 115 LDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEE 174
           + +V +    +      +    N ++  +G L+   R  +A++ +G ++C Y        
Sbjct: 32  VPNVFRAQAVNGEQFLAWWNYFNLLLNKEGYLTNAERELVAVVVSGVNRCLYCAVSHGAA 91

Query: 175 FLSQGGDQDWLKGL------SYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLG 228
                GD      +      +   ++   L    + L   P  +  + L+ L   G    
Sbjct: 92  LREFLGDPQKADAVAVNWRHADLTEREQALAAYAEKLTRHPAEVTAADLEPLRAVGLDDH 151

Query: 229 ELCHALVLLVNFHSLASFVFACGV 252
           ++   + ++  F+       A G 
Sbjct: 152 QIMELVQVIGMFNLTNRVSSALGF 175

>d2ouwa1 a.152.1.4 (A:1-134) Hypothetical protein Rru_A0301 {Rhodospirillum rubrum [TaxId: 1085]} Length = 134

class: All alpha proteins
fold: AhpD-like
superfamily: AhpD-like
family: TTHA0727-like
domain: Hypothetical protein Rru A0301
species: Rhodospirillum rubrum [TaxId: 1085]

 Score = 35.4 bits (81), Expect = 0.002
 Identities = 12/72 (16%), Positives = 26/72 (36%)

Query: 114 KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKE 173
            ++++ + +   P  L         +M G+G L    R  I +  +  + CSY  +    
Sbjct: 33  FVNNIWRGLANDPALLKRTWEQVKTVMVGEGALDPLTREMIYLAVSTANSCSYCAHSHTA 92

Query: 174 EFLSQGGDQDWL 185
              ++G      
Sbjct: 93  AARAKGMTPAQH 104

>d1vkea_ a.152.1.2 (A:) Hypothetical protein TM1620 {Thermotoga maritima [TaxId: 2336]} Length = 118

class: All alpha proteins
fold: AhpD-like
superfamily: AhpD-like
family: CMD-like
domain: Hypothetical protein TM1620
species: Thermotoga maritima [TaxId: 2336]

 Score = 35.3 bits (81), Expect = 0.002
 Identities = 9/63 (14%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 121 VMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGG 180
           V+         F    + + R  G L  + +  + ++A+   +C   I       + +G 
Sbjct: 14  VLSRGTLNTKRFFNLDSAVYR-PGKLDVKTKELMGLVASTVLRCDDCIRYHLVRCVQEGA 72

Query: 181 DQD 183
             +
Sbjct: 73  SDE 75

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	286
d2pfxa1	190	Uncharacterized protein TM1040_2465 {Silicibacter	100.0
d2oyoa1	186	Uncharacterized protein Dgeo_1446 {Deinococcus geo	99.97
d2prra1	190	Uncharacterized protein Reut_A2532 {Ralstonia eutr	99.97
d2o4da1	144	Hypothetical protein PA0269 {Pseudomonas aeruginos	99.86
d2gmya1	147	Hypothetical protein Atu0492 {Agrobacterium tumefa	99.81
d2ouwa1	134	Hypothetical protein Rru_A0301 {Rhodospirillum rub	99.76
d2cwqa1	117	Hypothetical protein TTHA0727 {Thermus thermophilu	99.28
d1vkea_	118	Hypothetical protein TM1620 {Thermotoga maritima [	98.96
d2q0ta1	257	Hypothetical protein Bxeno_B2006 {Burkholderia xen	98.91
d1knca_	174	Antioxidant defense protein AhpD {Mycobacterium tu	98.04
d2q0ta1	257	Hypothetical protein Bxeno_B2006 {Burkholderia xen	96.57
d2af7a1	119	Gamma-carboxymuconolactone decarboxylase, CMD {Arc	94.01
d2af7a1	119	Gamma-carboxymuconolactone decarboxylase, CMD {Arc	93.38

>d2pfxa1 a.152.1.3 (A:1-190) Uncharacterized protein TM1040_2465 {Silicibacter sp. tm1040 [TaxId: 292414]}

class: All alpha proteins
fold: AhpD-like
superfamily: AhpD-like
family: Atu0492-like
domain: Uncharacterized protein TM1040 2465
species: Silicibacter sp. tm1040 [TaxId: 292414]

Probab=100.00  E-value=2.5e-34  Score=248.29  Aligned_cols=175  Identities=14%  Similarity=0.151  Sum_probs=159.5

Q ss_pred             cCchhhhhhhhcc---CCChhhhhccccccc--cchhhHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhh
Q psy17685         85 MTSEEYNNVLKEF---HHSEKSQLYSDDTFL--QKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAA  159 (286)
Q Consensus        85 mTk~~~~s~L~~~---~~~Ek~q~Lf~eaf~--GrVpNV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaS  159 (286)
                      ||++.-++.++.+   +.+|+++.+|..+..  |+|||++++|+++|+.|++|+..++.+|+++|+||..+||+|++.||
T Consensus         1 ~~~~~~pt~~~lp~~d~~p~~~~~~~~~~~~~~G~vpN~~~~la~~P~~l~a~~~~~~~~~~~~~~L~~~~rEli~l~vS   80 (190)
T d2pfxa1           1 MTKPKEPTALDLPMADPLPDETQKYFEICQEKLGMVPNVLKAYAFNVEKLNAFTAMYNDLMLGESQLSKLEREMIAVVVS   80 (190)
T ss_dssp             CSCCCSSCSSCCCCCSSCCHHHHHHHHHHHHHHSSCCHHHHHHTTSHHHHHHHHHHHHHHHHSSCSSCHHHHHHHHHHHH
T ss_pred             CCCCCCCcCCCCCCCCCCCHHHHHHHHHHHHHhCCCcHHHHHHHcCHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHH
Confidence            4555555555544   778999999988766  99999999999999999999999999999999999999999999999


Q ss_pred             ccCCcchHHHHHHHHHHhccCChhhhcc------cCCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHH
Q psy17685        160 GRHQCSYLINLQKEEFLSQGGDQDWLKG------LSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHA  233 (286)
Q Consensus       160 a~n~C~Ycv~~H~a~f~~~gGDp~wl~g------l~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~A  233 (286)
                      ..|+|.||+.+|+...+..|++++..+.      -...++|+|++++|+..+++.|+.|+++|++.|+++|||++||+++
T Consensus        81 ~~n~C~YC~~~H~~~~~~~g~~~~~~~~i~~~~~~~~~~~~e~all~~a~~l~~~~~~v~d~~~~~L~~~G~sd~eI~el  160 (190)
T d2pfxa1          81 SINKCFYCLVAHGAAVRQLSGDPQLGEMLVMNYRVAPLDARQRVMLDFAAKMTRASAEIEEADREVLRSHGFNDRDIWDI  160 (190)
T ss_dssp             HHHTCHHHHHHHHHHHHHHHTCHHHHHHHHHCGGGSCCCHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHTTCCHHHHHHH
T ss_pred             HHhCCcHHHHHHHHHHHHhcCChhhhhhHHhhcccchhhHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHCCCCHHHHHHH
Confidence            9999999999999999999999976542      2458999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcCCC
Q psy17685        234 LVLLVNFHSLASFVFACGVNEELDSL  259 (286)
Q Consensus       234 v~Ila~fhsl~~fv~G~Gi~pe~D~~  259 (286)
                      +.++++||++||+..++|+.|+.+..
T Consensus       161 ~~~ia~~~~~nr~~~~lgv~pd~e~~  186 (190)
T d2pfxa1         161 ANVTGFFNMTNRVASATAMMPNAEYH  186 (190)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCGGGG
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCHHHH
Confidence            99999999999999999999876644

>d2oyoa1 a.152.1.3 (A:10-195) Uncharacterized protein Dgeo_1446 {Deinococcus geothermalis [TaxId: 68909]}

class: All alpha proteins
fold: AhpD-like
superfamily: AhpD-like
family: Atu0492-like
domain: Uncharacterized protein Dgeo 1446
species: Deinococcus geothermalis [TaxId: 68909]

Probab=99.97  E-value=1.3e-31  Score=229.23  Aligned_cols=161  Identities=13%  Similarity=0.122  Sum_probs=151.2

Q ss_pred             CCChhhhhccccccc--cchhhHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHH
Q psy17685         98 HHSEKSQLYSDDTFL--QKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEF  175 (286)
Q Consensus        98 ~~~Ek~q~Lf~eaf~--GrVpNV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f  175 (286)
                      ..||+++.++..+..  |+|||++++|+++|+.+++|+.+++.+|+.+|.||..+||+|++.||..|+|.||+.+|+...
T Consensus        13 ~~~~~~~~~~~~~~~~~G~vpn~~~~la~~P~~l~~~~~~~~~l~~~~~~L~~~~rEli~l~vs~~n~C~YC~~~H~~~a   92 (186)
T d2oyoa1          13 QVPEGVRKLWAKAEANIGFVPNVFRAQAVNGEQFLAWWNYFNLLLNKEGYLTNAERELVAVVVSGVNRCLYCAVSHGAAL   92 (186)
T ss_dssp             GSCHHHHHHHHHHHHHHSSCCTHHHHGGGSHHHHHHHHHHHHHHHTSCCSSCHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHHHHHcCCCHHHHHHHHcCHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence            557888988887655  999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhccCChhhhcc------cCCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHh
Q psy17685        176 LSQGGDQDWLKG------LSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFA  249 (286)
Q Consensus       176 ~~~gGDp~wl~g------l~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G  249 (286)
                      +..|++++....      -+..++|++++++|+..+|..|+.+++++++.|++.|||+.||++++.++++|+++|++..+
T Consensus        93 ~~~g~~~~~~~~~~~~~~~~~~~~~e~a~l~~a~~lt~~~~~v~~~~~~~l~~~g~~~~~ivel~~~ia~~~~~nr~~~~  172 (186)
T d2oyoa1          93 REFLGDPQKADAVAVNWRHADLTEREQALAAYAEKLTRHPAEVTAADLEPLRAVGLDDHQIMELVQVIGMFNLTNRVSSA  172 (186)
T ss_dssp             HHHHTCHHHHHHHHHCGGGSCCCHHHHHHHHHHHHHHHCGGGCCGGGGHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhccccchhhhHHHhcccccchHHHHHHHHHHHHHHHhhhcccCHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999987652      24689999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcCC
Q psy17685        250 CGVNEELDS  258 (286)
Q Consensus       250 ~Gi~pe~D~  258 (286)
                      +|+.||.+.
T Consensus       173 lgi~~d~e~  181 (186)
T d2oyoa1         173 LGFVPNPEY  181 (186)
T ss_dssp             TTCCCCHHH
T ss_pred             cCCCCCHHH
Confidence            999988763

>d2prra1 a.152.1.3 (A:5-194) Uncharacterized protein Reut_A2532 {Ralstonia eutropha [TaxId: 106590]}

class: All alpha proteins
fold: AhpD-like
superfamily: AhpD-like
family: Atu0492-like
domain: Uncharacterized protein Reut A2532
species: Ralstonia eutropha [TaxId: 106590]

Probab=99.97  E-value=3.5e-31  Score=226.64  Aligned_cols=160  Identities=11%  Similarity=0.125  Sum_probs=149.6

Q ss_pred             CCChhhhhccccccc--cchhhHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHH
Q psy17685         98 HHSEKSQLYSDDTFL--QKLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEF  175 (286)
Q Consensus        98 ~~~Ek~q~Lf~eaf~--GrVpNV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f  175 (286)
                      ..+++++.++.....  |+|||++++|+++|+.+++|+.+++.+++++|+||..+||+|++.+|..|+|.||+.+|....
T Consensus        14 ~~~~~~~~~~~~~~~~~G~vpn~~~~la~~P~~l~~~~~~~~~~~~~~~~L~~~~~Eli~l~vs~~n~c~YC~~~h~~~~   93 (190)
T d2prra1          14 ALPDDIRQRILEVQDKAGFVPNVFLTLAHRPDEFRAFFAYHDALMLKDGGLTKGEREMIVVATSAANQCLYCVVAHGAIL   93 (190)
T ss_dssp             GSCHHHHHHHHHHHHHHSSCCHHHHHHTTSHHHHHHHHHHHHHHHSSCSSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHhCCCHHHHHHHHhCHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence            567888888888766  999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhccCChhhhcc------cCCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHh
Q psy17685        176 LSQGGDQDWLKG------LSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFA  249 (286)
Q Consensus       176 ~~~gGDp~wl~g------l~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G  249 (286)
                      +..|++++..+.      -+..++|++++++++..++..|+.|+++++++|+++|||++||++++.++++|+++|++..+
T Consensus        94 ~~~g~~~~~~~~i~~~~~~~~~~~~~~a~l~~a~~~~~~~~~v~d~~~~~L~~~g~s~~eivel~~~va~~~~~nr~~~~  173 (190)
T d2prra1          94 RIYEKKPLVADQVAVNYLKADIPPRQRAMLDFALKVCKASHEVNEADFEALREHGFTDEDAWDIAAITAFFGLSNRMANT  173 (190)
T ss_dssp             HHHHTCTTHHHHHHHHGGGSSCCHHHHHHHHHHHHHHHHGGGCCHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHcccchhhHHHHHhccccccccHHHHHHHHHHHHHHHhccCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999877653      35689999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcC
Q psy17685        250 CGVNEELD  257 (286)
Q Consensus       250 ~Gi~pe~D  257 (286)
                      +||.||.+
T Consensus       174 l~i~~d~e  181 (190)
T d2prra1         174 IGMRPNDE  181 (190)
T ss_dssp             HTCCCCHH
T ss_pred             hCCCCChH
Confidence            99976654

>d2o4da1 a.152.1.3 (A:2-145) Hypothetical protein PA0269 {Pseudomonas aeruginosa [TaxId: 287]}

class: All alpha proteins
fold: AhpD-like
superfamily: AhpD-like
family: Atu0492-like
domain: Hypothetical protein PA0269
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.86  E-value=1e-21  Score=161.46  Aligned_cols=131  Identities=15%  Similarity=0.220  Sum_probs=119.2

Q ss_pred             HhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCChhhhccc------CCCCHHH
Q psy17685        122 MGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGL------SYAPKKL  195 (286)
Q Consensus       122 la~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp~wl~gl------~~ip~Kl  195 (286)
                      ..+.|+.+++|..+++.++.  |.||+.+||+|++.+|..|+|.||+.+|+...+..|.+++-.+.+      +..++|+
T Consensus         7 ~~~sP~~~~~~~~l~~~l~~--~~L~~~~~Eli~l~vs~~n~C~YC~~~H~~~a~~~G~~~~~i~~l~~~~~~~~~~~~e   84 (144)
T d2o4da1           7 AKASPDAYAAMLGLEKALAK--AGLERPLIELVYLRTSQINGCAYCVNMHANDARKAGETEQRLQALCVWQETPYFTPRE   84 (144)
T ss_dssp             HHHCHHHHHHHHHHHHHHHH--SSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHGGGGGGCSCSCHHH
T ss_pred             HHhCHHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHcCChHHHHhHHHHHHHhhhhhhHHHHHhccccCCCCCHHH
Confidence            44689999999999998874  569999999999999999999999999999999999999766533      3478999


Q ss_pred             HHHHHHHHHHcc-CCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q psy17685        196 GLLYEVNKILAH-RPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVNEE  255 (286)
Q Consensus       196 raL~~~n~~Lah-~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~Gi~pe  255 (286)
                      |++++|+..+|. .+-.+++++++.|+ .+||++||++++.++++||++|+|..++|+.||
T Consensus        85 ~a~l~~a~~lt~~~~~~v~d~~~~~l~-~~fsd~~i~el~~~ia~~~~~nr~~~~l~~~pE  144 (144)
T d2o4da1          85 RAALAWTEQLARLSQGALPHGLLDELR-EHFDDKEIAELTLAVSAINAWNRFGVGMGMQPE  144 (144)
T ss_dssp             HHHHHHHHHHHTGGGSCCCTTHHHHHT-TTSCHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHHHHHHHHhccccCCCHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            999999999985 66789999999987 679999999999999999999999999999997

>d2gmya1 a.152.1.3 (A:2-148) Hypothetical protein Atu0492 {Agrobacterium tumefaciens [TaxId: 358]}

class: All alpha proteins
fold: AhpD-like
superfamily: AhpD-like
family: Atu0492-like
domain: Hypothetical protein Atu0492
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.81  E-value=5.1e-20  Score=151.24  Aligned_cols=133  Identities=12%  Similarity=0.202  Sum_probs=117.4

Q ss_pred             HhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCChhhhccc------CCCCHHH
Q psy17685        122 MGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGL------SYAPKKL  195 (286)
Q Consensus       122 la~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp~wl~gl------~~ip~Kl  195 (286)
                      +++.|+.+++|..++..+.  +|+||..+||+|.+.+|..|+|.||+.+|....+..|.+++..+.+      ...++|+
T Consensus         7 ~~~sP~~l~~~~~l~~~l~--~~~L~~~~~Eli~l~vs~~ngC~YC~~~h~~~a~~~G~~~~~i~ai~~~~~~~~~~~~e   84 (147)
T d2gmya1           7 AKASPEAFKAVMALENYVQ--SSGLEHRFIHLIKLRASIINGCAFCVDMHVKESRHDGLSEQWINLMSVWRESPVYTEQE   84 (147)
T ss_dssp             HHHCHHHHHHHHHHHHHHH--TSSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHGGGGGGGCTTSCHHH
T ss_pred             HHhCHHHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccchHHHHHHHhcccCCCCCHHH
Confidence            5668999999999988875  4679999999999999999999999999999999999998766433      3478999


Q ss_pred             HHHHHHHHHHccCC-CCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCCCcC
Q psy17685        196 GLLYEVNKILAHRP-WLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVNEELD  257 (286)
Q Consensus       196 raL~~~n~~Lah~P-w~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~Gi~pe~D  257 (286)
                      +++++++..++..| -.+++++.+.|. .+||++||++++.++++||+.|+|..|+|..+..+
T Consensus        85 ~a~l~~a~~~~~~~~~~~~d~~~~~l~-~~fs~~eivel~~~i~~~n~~Nr~~~al~~~~p~~  146 (147)
T d2gmya1          85 RALLGWVDAVTKIAETGAPDDAFETLR-AHFSDEEIVKITVAIGAINTWNRIAVGFRSQHPVE  146 (147)
T ss_dssp             HHHHHHHHHHHTHHHHCCCHHHHHHHH-HHSCHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred             HHHHHHHHHHhhcCCCCCCHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence            99999999999866 457777777776 68999999999999999999999999999877654

>d2ouwa1 a.152.1.4 (A:1-134) Hypothetical protein Rru_A0301 {Rhodospirillum rubrum [TaxId: 1085]}

class: All alpha proteins
fold: AhpD-like
superfamily: AhpD-like
family: TTHA0727-like
domain: Hypothetical protein Rru A0301
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=99.76  E-value=1.3e-18  Score=141.59  Aligned_cols=112  Identities=15%  Similarity=0.182  Sum_probs=101.8

Q ss_pred             hhhhccccccc--c--chhhHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHh
Q psy17685        102 KSQLYSDDTFL--Q--KLDHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLS  177 (286)
Q Consensus       102 k~q~Lf~eaf~--G--rVpNV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~  177 (286)
                      +++.++.++..  |  +|||++++|+++|+.+++|+..++.++..+|.||..+||+|++.+|..|+|.||+.+|..    
T Consensus        17 e~~~i~~~i~~~~g~~~vpN~~~~la~~P~~l~~~~~~~~~~~~~~~~L~~~~kEli~l~vS~~n~C~YC~~~H~~----   92 (134)
T d2ouwa1          17 EVKAVFDDIRATRGSDFVNNIWRGLANDPALLKRTWEQVKTVMVGEGALDPLTREMIYLAVSTANSCSYCAHSHTA----   92 (134)
T ss_dssp             HHHHHHHHHHHHHSSSCCCHHHHHHTTSHHHHHHHHHHHHHHHSSSSSSCHHHHHHHHHHHHHHTTCHHHHHHHHH----
T ss_pred             HHHHHHHHHHHHhCCCCCCHHHHHHccCHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHcCChHHHHHHHH----
Confidence            36777777655  4  899999999999999999999999999999999999999999999999999999999985    


Q ss_pred             ccCChhhhcccCCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCCCcC
Q psy17685        178 QGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFACGVNEELD  257 (286)
Q Consensus       178 ~gGDp~wl~gl~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~Gi~pe~D  257 (286)
                                                               .+++.|-|.++|.+++.+.++++..++++.|.++..+.+
T Consensus        93 -----------------------------------------~a~~~G~s~e~I~e~~a~~~~~~~~~~l~~~~~~~vD~~  131 (134)
T d2ouwa1          93 -----------------------------------------AARAKGMTPAQHAEVLAIIGLAAQTNALVTAMQIPVDEA  131 (134)
T ss_dssp             -----------------------------------------HHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCCCGG
T ss_pred             -----------------------------------------HHHHcCCCHHHHHHHHHHHHHHhhhHHHHHHhcCCCCch
Confidence                                                     455689999999999999999999999999998887765


Q ss_pred             C
Q psy17685        258 S  258 (286)
Q Consensus       258 ~  258 (286)
                      .
T Consensus       132 ~  132 (134)
T d2ouwa1         132 F  132 (134)
T ss_dssp             G
T ss_pred             h
Confidence            3

>d2cwqa1 a.152.1.4 (A:1-117) Hypothetical protein TTHA0727 {Thermus thermophilus [TaxId: 274]}

class: All alpha proteins
fold: AhpD-like
superfamily: AhpD-like
family: TTHA0727-like
domain: Hypothetical protein TTHA0727
species: Thermus thermophilus [TaxId: 274]

Probab=99.28  E-value=4.8e-12  Score=101.32  Aligned_cols=92  Identities=18%  Similarity=0.139  Sum_probs=82.0

Q ss_pred             c-chhhHHHHHh-cCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCChhhhcccCC
Q psy17685        113 Q-KLDHVTQVMG-YHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSY  190 (286)
Q Consensus       113 G-rVpNV~~vla-~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp~wl~gl~~  190 (286)
                      | .+||.+..|+ .+|+.++.|...+...|..+|.|+..+||+|++.+|..++|.||+..|                   
T Consensus        17 G~~~P~~~~~mae~~P~~l~~~~~~~~~~~~~~g~Ld~k~reLI~la~s~a~gc~~c~~~h-------------------   77 (117)
T d2cwqa1          17 GEGLPRAIPLLAEKAPGLLLEHGRSWTYAMPEKGALDEKTRTLILLGIALATGSEACVKAM-------------------   77 (117)
T ss_dssp             GGGCCTHHHHHHHHCHHHHHHHHHHHHHHSCTTCSSCHHHHHHHHHHHHHHHTCHHHHHHH-------------------
T ss_pred             hhhccHHHHHHHHhChHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCChHHHHHH-------------------
Confidence            7 6999999999 699999999999999999999999999999999999999999999999                   


Q ss_pred             CCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHh
Q psy17685        191 APKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFA  249 (286)
Q Consensus       191 ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G  249 (286)
                                                +...++.|-|.+||.+++.|..++.....++.+
T Consensus        78 --------------------------~~~A~~~G~t~eEI~Eal~ia~~~~g~~~~~~a  110 (117)
T d2cwqa1          78 --------------------------AHRAKRLGLSKEALLETLKIARQAQANAVLGHA  110 (117)
T ss_dssp             --------------------------HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             --------------------------HHHHHHcCCCHHHHHHHHHHHHHhccchHHHHH
Confidence                                      455556788888888888888888877776654

>d1vkea_ a.152.1.2 (A:) Hypothetical protein TM1620 {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: AhpD-like
superfamily: AhpD-like
family: CMD-like
domain: Hypothetical protein TM1620
species: Thermotoga maritima [TaxId: 2336]

Probab=98.96  E-value=1.3e-09  Score=87.08  Aligned_cols=66  Identities=14%  Similarity=0.267  Sum_probs=58.2

Q ss_pred             hhHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCCh
Q psy17685        116 DHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQ  182 (286)
Q Consensus       116 pNV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp  182 (286)
                      .+.-++|+..|+.+++|+.+++.++. +|.||...||+|++.+|+.++|.||+..|....+..|-.+
T Consensus         9 ~~~~~~~~~~p~~~k~F~~~~~~v~~-~g~Ld~k~keLi~la~s~~~~c~~c~~~H~~~A~~~G~t~   74 (118)
T d1vkea_           9 ELNEKVLSRGTLNTKRFFNLDSAVYR-PGKLDVKTKELMGLVASTVLRCDDCIRYHLVRCVQEGASD   74 (118)
T ss_dssp             HHHHHC-CCSCHHHHHHHHHHHHTTS-CSSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCH
T ss_pred             HHHHHHHccCcHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHhCChHHHHHHHHHHHHcCCCH
Confidence            44568999999999999999999996 6999999999999999999999999999998877666544

>d2q0ta1 a.152.1.1 (A:1-257) Hypothetical protein Bxeno_B2006 {Burkholderia xenovorans [TaxId: 36873]}

class: All alpha proteins
fold: AhpD-like
superfamily: AhpD-like
family: AhpD
domain: Hypothetical protein Bxeno B2006
species: Burkholderia xenovorans [TaxId: 36873]

Probab=98.91  E-value=3.3e-09  Score=94.39  Aligned_cols=136  Identities=15%  Similarity=0.149  Sum_probs=106.7

Q ss_pred             cch-hhHHHHHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccCCcchH--HHHHHHHHHhccCC--------
Q psy17685        113 QKL-DHVTQVMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRHQCSYL--INLQKEEFLSQGGD--------  181 (286)
Q Consensus       113 GrV-pNV~~vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n~C~Yc--v~~H~a~f~~~gGD--------  181 (286)
                      |.+ ||...+++..|+++++|.++.+.++ .+|.|+...|++|++.+++.++|.||  +..|...-+..|-.        
T Consensus        22 G~~~~~~~~l~~~dP~~~~~~~~~~~~~~-~~g~L~~k~keLi~la~~~a~~~~~~~~~~~h~~~al~~G~t~~ei~E~l  100 (257)
T d2q0ta1          22 GKASPEWDSLVRLDPRFVDAYLKFAGVPQ-RRNHLDDKTRAFIALAADACATQLYAPGVARHIERALSFGATREELIEVL  100 (257)
T ss_dssp             SSCCHHHHHHHHHCHHHHHHHHHHHHHHH-HHCSSCHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred             CCcchHHHHHHHcCHHHHHHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHcCCCHHHHHHHH
Confidence            554 8889999999999999999987766 56899999999999999999999999  88897666655433        


Q ss_pred             ---------------------------------------------------------------hhhhcc----------c
Q psy17685        182 ---------------------------------------------------------------QDWLKG----------L  188 (286)
Q Consensus       182 ---------------------------------------------------------------p~wl~g----------l  188 (286)
                                                                                     |++.+.          -
T Consensus       101 ~~~~~~G~~~~~~~~~~~~ev~~e~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~  180 (257)
T d2q0ta1         101 ELVSTIGIHTSNVGVPVLLEVLEEEGLRKGAPPLDERRQKLKAEFETNRGYWHPTWEGLLELDPDLFEAYVEFSSVPWRT  180 (257)
T ss_dssp             HHHGGGGGHHHHHHHHHHHHHHHHTTSCCSCCCCCHHHHHHHHHHHHHHSCCCHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcChhHHHHHHHHHHHHHHHcCCCCCCCCCcchhhHHHHHHHHHhccccHHHHHHHhcCHHHHHHHHHHHHHHhcc
Confidence                                                                           222211          1


Q ss_pred             CCCCHHHHHHHHHHHHHccCCC-C-CCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhc
Q psy17685        189 SYAPKKLGLLYEVNKILAHRPW-L-LNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFAC  250 (286)
Q Consensus       189 ~~ip~KlraL~~~n~~Lah~Pw-~-I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~  250 (286)
                      ..+|+|.|.|..++...+...- . --..|++..++.|.|.+||.+++.++++. ...+...|+
T Consensus       181 ~~L~~k~reLi~la~~aa~~~~~~~~l~~Hi~~al~~G~t~eEi~eal~~~~~~-G~~~~~~~~  243 (257)
T d2q0ta1         181 GVLSPKIKEFMYCAFDASATHLYVPGLKLHIRNALRYGATAEELMELLEIVSVT-GIHGAELGA  243 (257)
T ss_dssp             CCSCHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHGGG-GGHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHc-ChHHHHHHH
Confidence            3599999999999988875431 1 13679999999999999999999877654 555555554

>d1knca_ a.152.1.1 (A:) Antioxidant defense protein AhpD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All alpha proteins
fold: AhpD-like
superfamily: AhpD-like
family: AhpD
domain: Antioxidant defense protein AhpD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.04  E-value=5e-06  Score=70.24  Aligned_cols=62  Identities=11%  Similarity=0.087  Sum_probs=51.4

Q ss_pred             CCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCChhhhcccCCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHH
Q psy17685        143 DGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWLKGLSYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTK  222 (286)
Q Consensus       143 ~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp~wl~gl~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~  222 (286)
                      .|+|++..+|+|++.+|+.|+|.||+..|.                                             +.+++
T Consensus       108 ~~gldk~~~ELi~LavS~~ngC~~Ci~~H~---------------------------------------------~~a~~  142 (174)
T d1knca_         108 NPGIPKANFELWSFAVSAINGCSHCLVAHE---------------------------------------------HTLRT  142 (174)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHTCHHHHHHHH---------------------------------------------HHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHcCChHHHHHHH---------------------------------------------HHHHH
Confidence            578999999999999999999999999998                                             44555


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHh
Q psy17685        223 NGWSLGELCHALVLLVNFHSLASFVFA  249 (286)
Q Consensus       223 ~gWS~~ELv~Av~Ila~fhsl~~fv~G  249 (286)
                      .|.|.+||.+++-|.+.++.+.+.+.+
T Consensus       143 ~G~t~eeI~eai~iaavi~g~~~~l~a  169 (174)
T d1knca_         143 VGVDREAIFEALKAAAIVSGVAQALAT  169 (174)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhHHHHHHHH
Confidence            677778888888888888777766543

>d2q0ta1 a.152.1.1 (A:1-257) Hypothetical protein Bxeno_B2006 {Burkholderia xenovorans [TaxId: 36873]}

class: All alpha proteins
fold: AhpD-like
superfamily: AhpD-like
family: AhpD
domain: Hypothetical protein Bxeno B2006
species: Burkholderia xenovorans [TaxId: 36873]

Probab=96.57  E-value=0.0018  Score=56.57  Aligned_cols=72  Identities=11%  Similarity=0.123  Sum_probs=58.3

Q ss_pred             cchhhHHH-HHhcCcHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHhhccC--CcchHHHHHHHHHHhccCChhhh
Q psy17685        113 QKLDHVTQ-VMGYHPTYLNIFLRTQNYIMRGDGPLSYEYRHYIAIMAAGRH--QCSYLINLQKEEFLSQGGDQDWL  185 (286)
Q Consensus       113 GrVpNV~~-vla~~P~yL~~f~~~~~~Lm~~~g~Lp~~eReyIAImaSa~n--~C~Ycv~~H~a~f~~~gGDp~wl  185 (286)
                      |+++.... .....|++++.|....... .++|.|+..+||+|++.+++..  +|.+|+..|...-+..|-.++-+
T Consensus       150 g~~~~~~~~~~~~~P~~~~~~~~~~~~~-~~~~~L~~k~reLi~la~~aa~~~~~~~~l~~Hi~~al~~G~t~eEi  224 (257)
T d2q0ta1         150 GYWHPTWEGLLELDPDLFEAYVEFSSVP-WRTGVLSPKIKEFMYCAFDASATHLYVPGLKLHIRNALRYGATAEEL  224 (257)
T ss_dssp             SCCCHHHHHHHHHCHHHHHHHHHHHHHH-HHHCCSCHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHTTCCHHHH
T ss_pred             ccccHHHHHHHhcCHHHHHHHHHHHHHH-hccCCCCHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcCCCHHHH
Confidence            88777665 4457999999999876555 5679999999999988876554  57889999999999999887544

>d2af7a1 a.152.1.2 (A:1-119) Gamma-carboxymuconolactone decarboxylase, CMD {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: All alpha proteins
fold: AhpD-like
superfamily: AhpD-like
family: CMD-like
domain: Gamma-carboxymuconolactone decarboxylase, CMD
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=94.01  E-value=0.031  Score=43.13  Aligned_cols=44  Identities=16%  Similarity=0.202  Sum_probs=40.3

Q ss_pred             CCCCCCHHHHHHHHHHhhccCCcchHHHHHHHHHHhccCChhhh
Q psy17685        142 GDGPLSYEYRHYIAIMAAGRHQCSYLINLQKEEFLSQGGDQDWL  185 (286)
Q Consensus       142 ~~g~Lp~~eReyIAImaSa~n~C~Ycv~~H~a~f~~~gGDp~wl  185 (286)
                      +++.|+..+|++|++.+.+..+|.+|+..|-..-+..|-.++-+
T Consensus        47 ~r~~Ld~k~r~Li~la~l~a~g~~~~l~~H~~~Al~~G~t~eEi   90 (119)
T d2af7a1          47 SRGVLDLKTRELLTLAALTVLRADDQLKSHVRGALNAGCSKDEI   90 (119)
T ss_dssp             TCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHCCCCHHHH
Confidence            46899999999999999999999999999999999998887655

>d2af7a1 a.152.1.2 (A:1-119) Gamma-carboxymuconolactone decarboxylase, CMD {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: All alpha proteins
fold: AhpD-like
superfamily: AhpD-like
family: CMD-like
domain: Gamma-carboxymuconolactone decarboxylase, CMD
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.38  E-value=0.097  Score=40.16  Aligned_cols=62  Identities=15%  Similarity=0.120  Sum_probs=50.5

Q ss_pred             CCCCHHHHHHHHHHHHHccCCCCCCHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHHhc
Q psy17685        189 SYAPKKLGLLYEVNKILAHRPWLLNPSHLQKLTKNGWSLGELCHALVLLVNFHSLASFVFAC  250 (286)
Q Consensus       189 ~~ip~KlraL~~~n~~Lah~Pw~I~~~di~~L~~~gWS~~ELv~Av~Ila~fhsl~~fv~G~  250 (286)
                      ..+|.|.|.|..++...+.+--.--..|++..++.|+|.+||.+++..++.|--..+...++
T Consensus        49 ~~Ld~k~r~Li~la~l~a~g~~~~l~~H~~~Al~~G~t~eEi~e~~~~~~~y~G~P~a~~a~  110 (119)
T d2af7a1          49 GVLDLKTRELLTLAALTVLRADDQLKSHVRGALNAGCSKDEIIEVMIQMAVYAGFPAAINAV  110 (119)
T ss_dssp             CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHccHHHHHHHH
Confidence            67999999999999999876433335788888889999999999999999986655555554