Psyllid ID: psy17712


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290---
MAENPVKYFFAGGVGGILTVLVGHPFDTVKVRLQTMSTEKPQYKGTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETAKVYSGPVDVVRKLVRQHGVTSVFKGLCATLLRDIPANGAYFVTYETIKNFLADRSTSPSGEKKSVSMLSTIFAGGCAGIMYWVVGMPADVLKSRLQTAPEGTYPNGVRSVLSTTLRNEGPGALYKGAIPVFLRAFPANAACFLGVEYTLSLLNKFS
ccccHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccHHHHHHHHHHHHcccccccHHHHHHHHcccccEEHHcHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHccccccccccccHHHHHHHHHHHHccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHcc
ccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccccHHHHHHHHHHHccccEEcccccHHHHcHccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHcccccccccccHHHHHHHHHHHccccEEEccccHHHHHHcHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccHHHHHHHHHHHccccHEEccccHHHHHHcHHHHHHHHHHHHHHHHHHccc
MAENPVKYFFAGGVGGILTVLVGHPFDTVKVRLQTmstekpqykgtfdCFTKIVRNESAVglykgmgapitgvaPIFALSflgygagkkvltnenndkLAHWQYFVagsfsgittaaitapGERIKCLLQIqsnetakvysgpVDVVRKLVRQHGVTSVFKGLCATLlrdipangayFVTYETIKNFladrstspsgekksVSMLSTIFAGGCAGIMYWVVGMPADVLKSRlqtapegtypngvRSVLSTTlrnegpgalykgaipvflrafpanaacFLGVEYTLSLLNKFS
MAENPVKYFFAGGVGGILTVLVGHPFDTVKVRLQtmstekpqykgtfdcFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETAKVYSGPVDVVRKLVRQHGVTSVFKGLCATLLRDIPANGAYFVTYETIKNFladrstspsgekKSVSMLSTIFAGGCAGIMYWVVGMPADVLKSRLQtapegtypngvrSVLSTTLRNEGPGALYKGAIPVFLRAFPANAACFLGVEYTLSLLNKFS
MAENPVKYFFAggvggiltvlvgHPFDTVKVRLQTMSTEKPQYKGTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETAKVYSGPVDVVRKLVRQHGVTSVFKGLCATLLRDIPANGAYFVTYETIKNFLADRSTSPSGEKKSVSMLSTIFAGGCAGIMYWVVGMPADVLKSRLQTAPEGTYPNGVRSVLSTTLRNEGPGALYKGAIPVFLRAFPANAACFLGVEYTLSLLNKFS
*****VKYFFAGGVGGILTVLVGHPFDTVKVRLQTMSTEKPQYKGTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETAKVYSGPVDVVRKLVRQHGVTSVFKGLCATLLRDIPANGAYFVTYETIKNFLA**************MLSTIFAGGCAGIMYWVVGMPADVLKSRLQTAPEGTYPNGVRSVLSTTLRNEGPGALYKGAIPVFLRAFPANAACFLGVEYTLSLLN***
***NPVKYFFAGGVGGILTVLVGHPFDTVKVRLQTMS***PQYKGTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTN****KLAHWQYFVAGSFSGITTAAITAPGERIKCL****************DVVRKLVRQHGVTSVFKGLCATLLRDIPANGAYFVTYETIKNFL****************LSTIFAGGCAGIMYWVVGMPADVLKSRLQTAPEGTYPNGVRSVLSTTLRNEGPGALYKGAIPVFLRAFPANAACFLGVEYTLSLLNKF*
MAENPVKYFFAGGVGGILTVLVGHPFDTVKVRLQTMSTEKPQYKGTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETAKVYSGPVDVVRKLVRQHGVTSVFKGLCATLLRDIPANGAYFVTYETIKNFLADR**********VSMLSTIFAGGCAGIMYWVVGMPADVLKSRLQTAPEGTYPNGVRSVLSTTLRNEGPGALYKGAIPVFLRAFPANAACFLGVEYTLSLLNKFS
**ENPVKYFFAGGVGGILTVLVGHPFDTVKVRLQTMSTEKPQYKGTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETAKVYSGPVDVVRKLVRQHGVTSVFKGLCATLLRDIPANGAYFVTYETIKNFLADRSTSPSGEKKSVSMLSTIFAGGCAGIMYWVVGMPADVLKSRLQTAPEGTYPNGVRSVLSTTLRNEGPGALYKGAIPVFLRAFPANAACFLGVEYTLSLLNKFS
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiii
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooo
ooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoo
ooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooo
oooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAENPVKYFFAGGVGGILTVLVGHPFDTVKVRLQTMSTEKPQYKGTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETAKVYSGPVDVVRKLVRQHGVTSVFKGLCATLLRDIPANGAYFVTYETIKNFLADRSTSPSGEKKSVSMLSTIFAGGCAGIMYWVVGMPADVLKSRLQTAPEGTYPNGVRSVLSTTLRNEGPGALYKGAIPVFLRAFPANAACFLGVEYTLSLLNKFS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query293 2.2.26 [Sep-21-2011]
Q9VQG4306 Congested-like trachea pr yes N/A 0.955 0.915 0.557 7e-89
Q9Z2Z6301 Mitochondrial carnitine/a yes N/A 0.955 0.930 0.517 6e-79
O43772301 Mitochondrial carnitine/a yes N/A 0.962 0.936 0.506 6e-79
Q8HXY2301 Mitochondrial carnitine/a N/A N/A 0.962 0.936 0.506 3e-78
Q27257312 Protein dif-1 OS=Caenorha yes N/A 0.952 0.894 0.518 8e-78
P97521301 Mitochondrial carnitine/a yes N/A 0.962 0.936 0.5 2e-77
Q08DK7298 Mitochondrial carnitine/a no N/A 0.914 0.899 0.402 4e-49
Q12289327 Mitochondrial carnitine c yes N/A 0.945 0.847 0.388 3e-48
Q8N8R3303 Mitochondrial carnitine/a no N/A 0.914 0.884 0.391 1e-46
Q5HZE0306 Mitochondrial carnitine/a no N/A 0.924 0.885 0.376 2e-46
>sp|Q9VQG4|COLT_DROME Congested-like trachea protein OS=Drosophila melanogaster GN=colt PE=2 SV=1 Back     alignment and function desciption
 Score =  327 bits (838), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 164/294 (55%), Positives = 203/294 (69%), Gaps = 14/294 (4%)

Query: 4   NPVKYFFAGGVGGILTVLVGHPFDTVKVRLQTMST----EKPQYKGTFDCFTKIVRNESA 59
           NPVK F  GG GGI  VL GHP DT+KVRLQTM      E+P Y+GTFDC  K ++NE  
Sbjct: 14  NPVKSFLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTIKNEGV 73

Query: 60  VGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAIT 119
            GLYKGM AP+TGVAPIFA+ F GY  GK++     + KL + Q FVAGSFSG+ +  I 
Sbjct: 74  RGLYKGMSAPLTGVAPIFAMCFAGYALGKRLQQRGEDAKLTYPQIFVAGSFSGLFSTLIM 133

Query: 120 APGERIKCLLQIQSNETA-KVYSGPVDVVRKLVRQHGVTSVFKGLCATLLRDIPANGAYF 178
           APGERIK LLQ Q  +   + Y+G +D   KL ++ G+ SVFKG CAT+LRD+PANG YF
Sbjct: 134 APGERIKVLLQTQQGQGGERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPANGLYF 193

Query: 179 VTYETIKNFLADRSTSPSGEKKSVSMLSTIFAGGCAGIMYWVVGMPADVLKSRLQTAPEG 238
           + YE +++    +S     E   +S  STIFAGG AG+ YW++GMPADVLKSRLQ+APEG
Sbjct: 194 LVYEALQDVAKSKS-----ETGQISTASTIFAGGVAGMAYWILGMPADVLKSRLQSAPEG 248

Query: 239 TYPNGVRSVLSTTLRNEGPGALYKGAIPVFLRAFPANAACFLGVEYTLSLLNKF 292
           TY +G+RSV    +  +GP ALY+G  P+ LRAFPANAACF G+E    L NKF
Sbjct: 249 TYKHGIRSVFKDLIVKDGPLALYRGVTPIMLRAFPANAACFFGIE----LANKF 298




Putative mitochondrial carrier of unknown solute specificity. Required for gas-filling of the tracheal system at hatching time of the embryo and for normal epithelial morphogenesis of the wings.
Drosophila melanogaster (taxid: 7227)
>sp|Q9Z2Z6|MCAT_MOUSE Mitochondrial carnitine/acylcarnitine carrier protein OS=Mus musculus GN=Slc25a20 PE=1 SV=1 Back     alignment and function description
>sp|O43772|MCAT_HUMAN Mitochondrial carnitine/acylcarnitine carrier protein OS=Homo sapiens GN=SLC25A20 PE=1 SV=1 Back     alignment and function description
>sp|Q8HXY2|MCAT_MACFA Mitochondrial carnitine/acylcarnitine carrier protein OS=Macaca fascicularis GN=SLC25A20 PE=2 SV=1 Back     alignment and function description
>sp|Q27257|DIF1_CAEEL Protein dif-1 OS=Caenorhabditis elegans GN=dif-1 PE=2 SV=1 Back     alignment and function description
>sp|P97521|MCAT_RAT Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus GN=Slc25a20 PE=1 SV=1 Back     alignment and function description
>sp|Q08DK7|MCATL_BOVIN Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Bos taurus GN=SLC25A29 PE=2 SV=1 Back     alignment and function description
>sp|Q12289|CRC1_YEAST Mitochondrial carnitine carrier OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CRC1 PE=1 SV=1 Back     alignment and function description
>sp|Q8N8R3|MCATL_HUMAN Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Homo sapiens GN=SLC25A29 PE=2 SV=2 Back     alignment and function description
>sp|Q5HZE0|MCATL_RAT Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Rattus norvegicus GN=Slc25a29 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query293
91075930298 PREDICTED: similar to mitochondrial carn 0.979 0.963 0.612 1e-97
156547917295 PREDICTED: congested-like trachea protei 0.965 0.959 0.591 5e-95
321460769299 hypothetical protein DAPPUDRAFT_231481 [ 0.962 0.943 0.580 3e-92
357629861298 mitochondrial carnitine/acylcarnitine tr 0.972 0.956 0.569 1e-91
158295347301 AGAP006104-PA [Anopheles gambiae str. PE 0.976 0.950 0.581 3e-91
389611335298 congested-like trachea [Papilio polytes] 0.962 0.946 0.575 2e-90
170032103301 mitochondrial carnitine/acylcarnitine ca 0.982 0.956 0.562 2e-90
66529899290 PREDICTED: congested-like trachea protei 0.952 0.962 0.568 3e-90
350424766296 PREDICTED: congested-like trachea protei 0.965 0.956 0.552 9e-90
340724732296 PREDICTED: congested-like trachea protei 0.948 0.939 0.557 2e-89
>gi|91075930|ref|XP_967309.1| PREDICTED: similar to mitochondrial carnitine/acylcarnitine carrier protein [Tribolium castaneum] gi|270014645|gb|EFA11093.1| hypothetical protein TcasGA2_TC004690 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  362 bits (929), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 183/299 (61%), Positives = 213/299 (71%), Gaps = 12/299 (4%)

Query: 1   MAE-NPVKYFFAGGVGGILTVLVGHPFDTVKVRLQTMST----EKPQYKGTFDCFTKIVR 55
           MAE  P++YF  GG GGI TV+VGHP DT+KVRLQTM      EKP Y GT DC    VR
Sbjct: 1   MAEIGPIQYFICGGFGGICTVVVGHPLDTIKVRLQTMPIPKPGEKPLYSGTLDCLKTTVR 60

Query: 56  NESAVGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITT 115
           NE   GLYKGMGAP+ GVAPIFA+SF+GYG GKK+    +    ++ QYF AG+FSGI T
Sbjct: 61  NEGIRGLYKGMGAPLLGVAPIFAISFMGYGVGKKIFGPGDGQHYSYLQYFTAGAFSGIFT 120

Query: 116 AAITAPGERIKCLLQIQSNETA-KVYSGPVDVVRKLVRQHGVTSVFKGLCATLLRDIPAN 174
             I APGERIKCLLQIQ   T  K YSGPVDVV+KL ++ G+ S+++G  ATLLRDIPA+
Sbjct: 121 TTIMAPGERIKCLLQIQQASTGPKTYSGPVDVVKKLYKEGGIRSIYRGSGATLLRDIPAS 180

Query: 175 GAYFVTYETIKNFLADRSTSPSGEKKSVSMLSTIFAGGCAGIMYWVVGMPADVLKSRLQT 234
           G YF+TYE IK+++ D        K+S S+L TIFAGG AGI  W VGMP DVLKSRLQT
Sbjct: 181 GMYFLTYEAIKDYITDHG------KESPSILGTIFAGGAAGIANWAVGMPPDVLKSRLQT 234

Query: 235 APEGTYPNGVRSVLSTTLRNEGPGALYKGAIPVFLRAFPANAACFLGVEYTLSLLNKFS 293
           APEGTYPNG+R V    +  EGPGALYKG  PV LRAFPANAACF+G E   + L   S
Sbjct: 235 APEGTYPNGIRDVFKKLMLTEGPGALYKGITPVLLRAFPANAACFVGFELCKTFLAYLS 293




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156547917|ref|XP_001604306.1| PREDICTED: congested-like trachea protein-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|321460769|gb|EFX71808.1| hypothetical protein DAPPUDRAFT_231481 [Daphnia pulex] Back     alignment and taxonomy information
>gi|357629861|gb|EHJ78379.1| mitochondrial carnitine/acylcarnitine translocase [Danaus plexippus] Back     alignment and taxonomy information
>gi|158295347|ref|XP_316164.4| AGAP006104-PA [Anopheles gambiae str. PEST] gi|157015993|gb|EAA11277.4| AGAP006104-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|389611335|dbj|BAM19279.1| congested-like trachea [Papilio polytes] Back     alignment and taxonomy information
>gi|170032103|ref|XP_001843922.1| mitochondrial carnitine/acylcarnitine carrier protein [Culex quinquefasciatus] gi|170072223|ref|XP_001870128.1| mitochondrial carnitine/acylcarnitine carrier protein [Culex quinquefasciatus] gi|167868464|gb|EDS31847.1| mitochondrial carnitine/acylcarnitine carrier protein [Culex quinquefasciatus] gi|167871871|gb|EDS35254.1| mitochondrial carnitine/acylcarnitine carrier protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|66529899|ref|XP_624739.1| PREDICTED: congested-like trachea protein-like [Apis mellifera] Back     alignment and taxonomy information
>gi|350424766|ref|XP_003493905.1| PREDICTED: congested-like trachea protein-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|340724732|ref|XP_003400735.1| PREDICTED: congested-like trachea protein-like [Bombus terrestris] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query293
FB|FBgn0019830306 colt "congested-like trachea" 0.955 0.915 0.534 3.4e-77
ZFIN|ZDB-GENE-040426-1869300 slc25a20 "solute carrier famil 0.965 0.943 0.522 1.9e-74
UNIPROTKB|E1C175301 SLC25A20 "Uncharacterized prot 0.955 0.930 0.517 5.3e-72
UNIPROTKB|F1SKK1301 SLC25A20 "Uncharacterized prot 0.955 0.930 0.503 1.6e-70
UNIPROTKB|E2RSN2301 SLC25A20 "Uncharacterized prot 0.955 0.930 0.496 1.8e-69
UNIPROTKB|Q3SZA4301 SLC25A20 "Uncharacterized prot 0.955 0.930 0.493 3.8e-69
MGI|MGI:1928738301 Slc25a20 "solute carrier famil 0.955 0.930 0.496 6.3e-69
UNIPROTKB|O43772301 SLC25A20 "Mitochondrial carnit 0.962 0.936 0.482 1e-68
UNIPROTKB|Q66HP8301 Slc25a20 "Mitochondrial carnit 0.962 0.936 0.479 4.4e-68
RGD|621443301 Slc25a20 "solute carrier famil 0.962 0.936 0.476 1.5e-67
FB|FBgn0019830 colt "congested-like trachea" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
 Identities = 157/294 (53%), Positives = 198/294 (67%)

Query:     4 NPVKYFFAXXXXXXXXXXXXHPFDTVKVRLQTMST----EKPQYKGTFDCFTKIVRNESA 59
             NPVK F              HP DT+KVRLQTM      E+P Y+GTFDC  K ++NE  
Sbjct:    14 NPVKSFLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQPLYRGTFDCAAKTIKNEGV 73

Query:    60 VGLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAIT 119
              GLYKGM AP+TGVAPIFA+ F GY  GK++     + KL + Q FVAGSFSG+ +  I 
Sbjct:    74 RGLYKGMSAPLTGVAPIFAMCFAGYALGKRLQQRGEDAKLTYPQIFVAGSFSGLFSTLIM 133

Query:   120 APGERIKCLLQIQSNETA-KVYSGPVDVVRKLVRQHGVTSVFKGLCATLLRDIPANGAYF 178
             APGERIK LLQ Q  +   + Y+G +D   KL ++ G+ SVFKG CAT+LRD+PANG YF
Sbjct:   134 APGERIKVLLQTQQGQGGERKYNGMIDCAGKLYKEGGLRSVFKGSCATMLRDLPANGLYF 193

Query:   179 VTYETIKNFLADRSTSPSGEKKSVSMLSTIFAGGCAGIMYWVVGMPADVLKSRLQTAPEG 238
             + YE +++    +S S +G+   +S  STIFAGG AG+ YW++GMPADVLKSRLQ+APEG
Sbjct:   194 LVYEALQDVA--KSKSETGQ---ISTASTIFAGGVAGMAYWILGMPADVLKSRLQSAPEG 248

Query:   239 TYPNGVRSVLSTTLRNEGPGALYKGAIPVFLRAFPANAACFLGVEYTLSLLNKF 292
             TY +G+RSV    +  +GP ALY+G  P+ LRAFPANAACF G+E    L NKF
Sbjct:   249 TYKHGIRSVFKDLIVKDGPLALYRGVTPIMLRAFPANAACFFGIE----LANKF 298


GO:0005215 "transporter activity" evidence=ISS;NAS
GO:0005740 "mitochondrial envelope" evidence=ISS;NAS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0005476 "carnitine:acyl carnitine antiporter activity" evidence=ISS
GO:0015879 "carnitine transport" evidence=ISS
GO:0006844 "acyl carnitine transport" evidence=ISS
GO:0006911 "phagocytosis, engulfment" evidence=IMP
ZFIN|ZDB-GENE-040426-1869 slc25a20 "solute carrier family 25 (carnitine/acylcarnitine translocase), member 20" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1C175 SLC25A20 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1SKK1 SLC25A20 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2RSN2 SLC25A20 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q3SZA4 SLC25A20 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1928738 Slc25a20 "solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|O43772 SLC25A20 "Mitochondrial carnitine/acylcarnitine carrier protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q66HP8 Slc25a20 "Mitochondrial carnitine/acylcarnitine carrier protein" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|621443 Slc25a20 "solute carrier family 25 (carnitine/acylcarnitine translocase), member 20" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q27257DIF1_CAEELNo assigned EC number0.51890.95220.8942yesN/A
Q8HXY2MCAT_MACFANo assigned EC number0.50680.96240.9368N/AN/A
Q12289CRC1_YEASTNo assigned EC number0.38850.94530.8470yesN/A
Q10248YD1K_SCHPONo assigned EC number0.33560.90780.8926yesN/A
Q93XM7MCAT_ARATHNo assigned EC number0.39600.94190.92yesN/A
O43772MCAT_HUMANNo assigned EC number0.50680.96240.9368yesN/A
Q9Z2Z6MCAT_MOUSENo assigned EC number0.51700.95560.9302yesN/A
P97521MCAT_RATNo assigned EC number0.50.96240.9368yesN/A
Q54BM3MCFG_DICDINo assigned EC number0.36640.95560.9333yesN/A
Q9VQG4COLT_DROMENo assigned EC number0.55780.95560.9150yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-26
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-25
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-20
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 8e-15
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 5e-14
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 4e-07
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 7e-07
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 98.5 bits (246), Expect = 4e-26
 Identities = 30/91 (32%), Positives = 48/91 (52%)

Query: 102 WQYFVAGSFSGITTAAITAPGERIKCLLQIQSNETAKVYSGPVDVVRKLVRQHGVTSVFK 161
               +AG  +G   A +T P + +K  LQ  +   ++ Y G +D  +K+ ++ G+  ++K
Sbjct: 6   LASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLYK 65

Query: 162 GLCATLLRDIPANGAYFVTYETIKNFLADRS 192
           GL   LLR  PA   YF TYET+K  L  + 
Sbjct: 66  GLLPNLLRVAPAAAIYFGTYETLKKLLLKKL 96


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 293
KOG0764|consensus299 100.0
KOG0752|consensus320 100.0
KOG0758|consensus297 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0753|consensus317 100.0
KOG0759|consensus286 100.0
KOG0760|consensus302 100.0
KOG0762|consensus311 100.0
KOG0757|consensus319 100.0
KOG0754|consensus294 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0761|consensus361 100.0
KOG0751|consensus694 100.0
KOG0768|consensus323 100.0
KOG0749|consensus298 100.0
KOG0036|consensus463 100.0
KOG0756|consensus299 100.0
KOG0766|consensus297 100.0
KOG0755|consensus320 100.0
KOG0765|consensus333 100.0
KOG0769|consensus308 100.0
KOG0770|consensus353 100.0
KOG0767|consensus333 100.0
KOG0763|consensus301 100.0
KOG0750|consensus304 100.0
KOG0764|consensus 299 100.0
KOG0752|consensus320 100.0
KOG0753|consensus317 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0762|consensus311 100.0
KOG0768|consensus323 100.0
KOG0760|consensus 302 100.0
KOG0757|consensus319 100.0
KOG0759|consensus286 99.98
KOG0758|consensus297 99.98
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0754|consensus294 99.97
KOG0770|consensus 353 99.97
KOG0751|consensus694 99.96
KOG0765|consensus333 99.95
KOG0761|consensus361 99.95
KOG0769|consensus 308 99.95
KOG0750|consensus304 99.95
KOG0756|consensus299 99.95
KOG0767|consensus 333 99.95
KOG0749|consensus298 99.94
KOG1519|consensus297 99.93
KOG0763|consensus301 99.93
KOG0036|consensus463 99.93
KOG0766|consensus 297 99.93
KOG0755|consensus320 99.93
KOG2745|consensus321 99.89
KOG2954|consensus427 99.78
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.78
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.73
KOG2745|consensus321 99.71
KOG1519|consensus297 99.67
KOG2954|consensus427 98.71
>KOG0764|consensus Back     alignment and domain information
Probab=100.00  E-value=1.1e-61  Score=381.89  Aligned_cols=288  Identities=29%  Similarity=0.463  Sum_probs=257.2

Q ss_pred             CCchhHHHHHHhHHHHhhhhhcCchhhhhhhhccCC---CCCCCCCChHHHHHHHHHhhccchhcccccccccchhHHHH
Q psy17712          2 AENPVKYFFAGGVGGILTVLVGHPFDTVKVRLQTMS---TEKPQYKGTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFA   78 (293)
Q Consensus         2 ~~~~~~~~~~g~~a~~~~~~~~~Pld~ik~~~q~~~---~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~   78 (293)
                      ......++++|..+|+++++++||||++|+|+|++.   ...+.|++....++.|+|.||++|||||+.|+++++.++++
T Consensus         2 ~~~~~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWg   81 (299)
T KOG0764|consen    2 VDVQWEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGRTSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWG   81 (299)
T ss_pred             cccchhhhhhhhhhhhhhhhhccchhHhhhhhhhccCccccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHH
Confidence            345567889999999999999999999999999983   25678999999999999999999999999999999999999


Q ss_pred             HHHHhhHHHHhhhcccCCCc-cchHHHHHHhhhhhhhhhhhcchhhHHHHHHhhccccC-CcccCCHHHHHHHHHHhhcc
Q psy17712         79 LSFLGYGAGKKVLTNENNDK-LAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNET-AKVYSGPVDVVRKLVRQHGV  156 (293)
Q Consensus        79 ~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~a~~~~~~~~~Pld~ik~r~q~~~~~~-~~~~~~~~~~~~~i~~~~G~  156 (293)
                      ++|.+||..|.++.+..+.. .+...++.+++.||+++.+++||++++|+|++.+.... ...|++.++++++++++||+
T Consensus        82 iYF~~Y~~~K~~~~~~~~~~~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~~~~~Y~~~f~a~rki~k~EG~  161 (299)
T KOG0764|consen   82 LYFFFYDFLKSFITEGFNSGLLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNVQSTAYKGMFDALRKIYKEEGF  161 (299)
T ss_pred             HHHHHHHHHHHHHhcCCCcccchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhcccccccccccHHHHHHHHHHHHhH
Confidence            99999999999997654444 37888999999999999999999999999999988754 34899999999999999999


Q ss_pred             chhccchhhHHhhhcccchhHHHHHHHHHHHhhcCCCCCCCCCccchhHHHHHHHHHHHHHHHHhhcchhHHHHHHhhCC
Q psy17712        157 TSVFKGLCATLLRDIPANGAYFVTYETIKNFLADRSTSPSGEKKSVSMLSTIFAGGCAGIMYWVVGMPADVLKSRLQTAP  236 (293)
Q Consensus       157 ~gly~G~~~~~l~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~is~P~d~i~~r~q~~~  236 (293)
                      +|||+|+.|.++. +...+++|..||.+|.++.+..+.+.  +...+....++.+.++.++|+.++||++|+|+|||.++
T Consensus       162 rgLY~GlVP~L~G-vshgAiQF~~YE~lK~~~~~~~~~~~--d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~~  238 (299)
T KOG0764|consen  162 RGLYKGLVPGLLG-VSHGAIQFPAYEELKLRKNRKQGRST--DNHLSNLDYIALASLSKVFASTLTYPHQVLRTRLQDQS  238 (299)
T ss_pred             HHHHhhhhhHhhh-hchhhhhhhhHHHHHHHHHHhcCCCc--ccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHHHhcc
Confidence            9999999999995 55889999999999999975332211  34556677777777999999999999999999999996


Q ss_pred             CC-CCCCCHHHHHHHHHHhhCccccccchhhhhhhhhcchhhHHHHHHHHHHHhhhcC
Q psy17712        237 EG-TYPNGVRSVLSTTLRNEGPGALYKGAIPVFLRAFPANAACFLGVEYTLSLLNKFS  293 (293)
Q Consensus       237 ~~-~~~~~~~~~~~~i~~~eG~~gly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (293)
                      .. .| .+.++++++++++||++|||||+.++++|..|.+.++|+.||.++++|..++
T Consensus       239 ~~~~~-~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~ITF~vyEnv~~~L~~~~  295 (299)
T KOG0764|consen  239 DNPRY-RGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACITFLVYENVKHFLVTHR  295 (299)
T ss_pred             cCccc-ccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceeeeehHHHHHHHHhccc
Confidence            43 45 8999999999999999999999999999999999999999999999988753



>KOG0752|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-19
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 2e-12
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 2e-06
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 76/268 (28%), Positives = 112/268 (41%), Gaps = 17/268 (6%) Query: 25 PFDTVKVRLQTMSTEK--------PQYKGTFDCFTKIVRNESAVGLYKGMGAPITGVAPI 76 P DT KVRLQ + QY+G +VR E LY G+ A + Sbjct: 21 PLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMS- 79 Query: 77 FALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNET 136 FA +G K + ++ +AGS +G A+ P + +K Q Q+ Sbjct: 80 FASVRIGLYDSVKQFYTKGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAG 139 Query: 137 A-KVYSGPVDVVRKLVRQHGVTSVFKGLCATLLRDIPANGAYFVTYETIKNFLADRSTSP 195 + Y V+ + + R+ G+ ++KG + R+ N A VTY+ IK+ L + Sbjct: 140 GGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMT 199 Query: 196 SGEKKSVSMLSTIFAGGCAGIMYWVVGMPADVLKSRLQTAPEGTYPNGVRSVLSTTLRNE 255 + S AG C V+ P DV+K+R + G Y + L T LR E Sbjct: 200 --DDLPCHFTSAFGAGFCTT----VIASPVDVVKTRYMNSALGQYHSAGHCAL-TMLRKE 252 Query: 256 GPGALYKGAIPVFLRAFPANAACFLGVE 283 GP A YKG +P FLR N F+ E Sbjct: 253 GPRAFYKGFMPSFLRLGSWNVVMFVTYE 280
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-71
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 6e-34
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 8e-17
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 9e-10
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 5e-56
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-32
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-11
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  221 bits (565), Expect = 2e-71
 Identities = 76/293 (25%), Positives = 117/293 (39%), Gaps = 17/293 (5%)

Query: 9   FFAGGVGGILTVLVGHPFDTVKVRLQT--------MSTEKPQYKGTFDCFTKIVRNESAV 60
           F   G    +  L+  P DT KVRLQ          +    QY+G       +VR E   
Sbjct: 5   FLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPR 64

Query: 61  GLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAITA 120
            LY G+ A +       ++    Y + K+  T   ++        +AGS +G    A+  
Sbjct: 65  SLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTK-GSEHAGIGSRLLAGSTTGALAVAVAQ 123

Query: 121 PGERIKCLLQIQSN-ETAKVYSGPVDVVRKLVRQHGVTSVFKGLCATLLRDIPANGAYFV 179
           P + +K   Q Q+     + Y   V+  + + R+ G+  ++KG    + R+   N A  V
Sbjct: 124 PTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELV 183

Query: 180 TYETIKNFLADRSTSPSGEKKSVSMLSTIFAGGCAGIMYWVVGMPADVLKSRLQTAPEGT 239
           TY+ IK+ L   +           +     +   AG    V+  P DV+K+R   +  G 
Sbjct: 184 TYDLIKDTLLKANLMTDD------LPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQ 237

Query: 240 YPNGVRSVLSTTLRNEGPGALYKGAIPVFLRAFPANAACFLGVEYTLSLLNKF 292
           Y +       T LR EGP A YKG +P FLR    N   F+  E     L   
Sbjct: 238 Y-HSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAA 289


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query293
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=1.2e-58  Score=393.80  Aligned_cols=277  Identities=27%  Similarity=0.415  Sum_probs=251.7

Q ss_pred             HHHHHHhHHHHhhhhhcCchhhhhhhhccCCCC--------CCCCCChHHHHHHHHHhhccchhcccccccccchhHHHH
Q psy17712          7 KYFFAGGVGGILTVLVGHPFDTVKVRLQTMSTE--------KPQYKGTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFA   78 (293)
Q Consensus         7 ~~~~~g~~a~~~~~~~~~Pld~ik~~~q~~~~~--------~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~   78 (293)
                      .++++|++|++++.+++||+|++|+|+|++...        ...|++..+.+++++++||+++||||+.+++++.++..+
T Consensus         3 ~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~   82 (303)
T 2lck_A            3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFAS   82 (303)
T ss_dssp             CHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHH
T ss_pred             hhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHH
Confidence            478999999999999999999999999998742        346899999999999999999999999999999999999


Q ss_pred             HHHHhhHHHHhhhcccCCCccchHHHHHHhhhhhhhhhhhcchhhHHHHHHhhcccc-CCcccCCHHHHHHHHHHhhccc
Q psy17712         79 LSFLGYGAGKKVLTNENNDKLAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNE-TAKVYSGPVDVVRKLVRQHGVT  157 (293)
Q Consensus        79 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~Pld~ik~r~q~~~~~-~~~~~~~~~~~~~~i~~~~G~~  157 (293)
                      ++|.+||.+++.+.+..+ ..+....+++|++||+++.++++|+|++|+|+|++... ....|++.++++++++++||++
T Consensus        83 i~f~~ye~~k~~~~~~~~-~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~  161 (303)
T 2lck_A           83 VRIGLYDSVKQFYTKGSE-HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIR  161 (303)
T ss_dssp             HTTTHHHHHHHHHSCCCS-SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHH
T ss_pred             HHHHHHHHHHHHHhcCCc-CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChh
Confidence            999999999998865422 35677889999999999999999999999999998642 3457899999999999999999


Q ss_pred             hhccchhhHHhhhcccchhHHHHHHHHHHHhhcCCCCCCCCCccchhHHHHHHHHHHHHHHHHhhcchhHHHHHHhhCCC
Q psy17712        158 SVFKGLCATLLRDIPANGAYFVTYETIKNFLADRSTSPSGEKKSVSMLSTIFAGGCAGIMYWVVGMPADVLKSRLQTAPE  237 (293)
Q Consensus       158 gly~G~~~~~l~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~is~P~d~i~~r~q~~~~  237 (293)
                      |||||+.|.+++.+|+.+++|.+||.+++.+.+..      ....+....+++|++||++++++++|+|+||+|||.+..
T Consensus       162 glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~------~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~  235 (303)
T 2lck_A          162 GLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKAN------LMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL  235 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTT------SCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred             hhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc------CCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccc
Confidence            99999999999999999999999999999886532      223456678999999999999999999999999999987


Q ss_pred             CCCCCCHHHHHHHHHHhhCccccccchhhhhhhhhcchhhHHHHHHHHHHHhhh
Q psy17712        238 GTYPNGVRSVLSTTLRNEGPGALYKGAIPVFLRAFPANAACFLGVEYTLSLLNK  291 (293)
Q Consensus       238 ~~~~~~~~~~~~~i~~~eG~~gly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (293)
                      ..| .++++|+++|+++||++|||||+.|+++|.+|.++++|.+||.+|+.+.+
T Consensus       236 ~~y-~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~  288 (303)
T 2lck_A          236 GQY-HSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMA  288 (303)
T ss_dssp             SSC-CSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred             ccc-CCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            778 89999999999999999999999999999999999999999999987653



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 293
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-33
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 6e-17
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 9e-17
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score =  121 bits (304), Expect = 2e-33
 Identities = 62/294 (21%), Positives = 112/294 (38%), Gaps = 24/294 (8%)

Query: 6   VKYFFAGGVGGILTVLVGHPFDTVKVRLQTMSTEK-----PQYKGTFDCFTKIVRNESAV 60
           +K F AGGV   ++     P + VK+ LQ     K      QYKG  DC  +I + +  +
Sbjct: 7   LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 66

Query: 61  GLYKGMGAPITGVAPIFALSFLGYGAGKKVLTNENNDKLAHWQYFV----AGSFSGITTA 116
             ++G  A +    P  AL+F      K++     +     W+YF     +G  +G T+ 
Sbjct: 67  SFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSL 126

Query: 117 AITAPGERIKCLL--QIQSNETAKVYSGPVDVVRKLVRQHGVTSVFKGLCATLLRDIPAN 174
               P +  +  L   +      + ++G  + + K+ +  G+  +++G   ++   I   
Sbjct: 127 CFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYR 186

Query: 175 GAYFVTYETIKNFLADRSTSPSGEKKSVSMLSTIFAGGCAGIMYWVVGMPADVLKSRLQT 234
            AYF  Y+T K  L D             ++ +         +  +V  P D ++ R+  
Sbjct: 187 AAYFGVYDTAKGMLPDPKNVH--------IIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM 238

Query: 235 ----APEGTYPNGVRSVLSTTLRNEGPGALYKGAIPVFLRAFPANAACFLGVEY 284
                       G         ++EGP A +KGA    LR     A   +  + 
Sbjct: 239 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDE 291


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query293
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.97
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=1.2e-52  Score=353.78  Aligned_cols=271  Identities=23%  Similarity=0.371  Sum_probs=241.3

Q ss_pred             hhHHHHHHhHHHHhhhhhcCchhhhhhhhccCCC-----CCCCCCChHHHHHHHHHhhccchhcccccccccchhHHHHH
Q psy17712          5 PVKYFFAGGVGGILTVLVGHPFDTVKVRLQTMST-----EKPQYKGTFDCFTKIVRNESAVGLYKGMGAPITGVAPIFAL   79 (293)
Q Consensus         5 ~~~~~~~g~~a~~~~~~~~~Pld~ik~~~q~~~~-----~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~   79 (293)
                      ..++|++|++|++++.+++||||+||+|+|++..     ....+++..+.+++++++||+++||+|+.+.+++..+.+.+
T Consensus         6 ~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~   85 (292)
T d1okca_           6 FLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQAL   85 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcccch
Confidence            4689999999999999999999999999998764     23457899999999999999999999999999999999999


Q ss_pred             HHHhhHHHHhhhcccCCCc----cchHHHHHHhhhhhhhhhhhcchhhHHHHHHhhcccc--CCcccCCHHHHHHHHHHh
Q psy17712         80 SFLGYGAGKKVLTNENNDK----LAHWQYFVAGSFSGITTAAITAPGERIKCLLQIQSNE--TAKVYSGPVDVVRKLVRQ  153 (293)
Q Consensus        80 ~f~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~a~~~~~~~~~Pld~ik~r~q~~~~~--~~~~~~~~~~~~~~i~~~  153 (293)
                      +|.+++.+++.+.......    ......+.+|..|++++.++++|+|++|+|+|.+...  ....+.+..+++++++++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (292)
T d1okca_          86 NFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKS  165 (292)
T ss_dssp             HHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHHhhhc
Confidence            9999999999887643322    2345668899999999999999999999999998653  455788999999999999


Q ss_pred             hccchhccchhhHHhhhcccchhHHHHHHHHHHHhhcCCCCCCCCCccchhHHHHHHHHHHHHHHHHhhcchhHHHHHHh
Q psy17712        154 HGVTSVFKGLCATLLRDIPANGAYFVTYETIKNFLADRSTSPSGEKKSVSMLSTIFAGGCAGIMYWVVGMPADVLKSRLQ  233 (293)
Q Consensus       154 ~G~~gly~G~~~~~l~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~is~P~d~i~~r~q  233 (293)
                      ||+++||+|+.+++++++++.+++|..||.+++.+.+        .........++++++++.+++++++|+|+||+|||
T Consensus       166 ~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~--------~~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q  237 (292)
T d1okca_         166 DGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPD--------PKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMM  237 (292)
T ss_dssp             HCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCG--------GGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhhhccccccccceehHhhhhhhhccchhhhccc--------ccccchHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence            9999999999999999999999999999999987654        34456678899999999999999999999999999


Q ss_pred             hCCCC-----CCCCCHHHHHHHHHHhhCccccccchhhhhhhhhcchhhHHHHHHHH
Q psy17712        234 TAPEG-----TYPNGVRSVLSTTLRNEGPGALYKGAIPVFLRAFPANAACFLGVEYT  285 (293)
Q Consensus       234 ~~~~~-----~~~~~~~~~~~~i~~~eG~~gly~G~~~~~~~~~~~~~~~~~~~~~~  285 (293)
                      .+...     .| .++++|++++++|||++|||||+.|+++|..+ .+++|.+||++
T Consensus       238 ~~~~~~~~~~~y-~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~l  292 (292)
T d1okca_         238 MQSGRKGADIMY-TGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEI  292 (292)
T ss_dssp             TTTTCCGGGCSC-SSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHTC
T ss_pred             hcCCCCCCCCCC-CCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhcC
Confidence            98754     35 79999999999999999999999999999765 68999999963



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure