Psyllid ID: psy17740

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380----
Protein Sequence
MNSTPPRTPSPLLSTTSIPVSVIMKVNKDGTCIPDPFGIREMKPKQIKDISLKKMLNVQDMRKKCVQMNNEETSYNILKSLKYKMSDRKEMIFVESKDTNRDKETSEEAANHETKNACVNTKSTCVPLEASENEAFQANIQMDASTTCADMTSFVPALPRSQNLNIAQSISNGFPDMLPNPNPSSPSYGPGPQTVIFTGGSFIPVDKSSPLFIFDKKPVNSVKSNCPSFLFFAQPPRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVAFNMMVTNLPHPVPA
Secondary Structure (PSIPRED)
ccccccccccccccccccccEEEEEEccccccccccccccccccccccccHHHHccccccHHHHHHHcccccccHHHHHccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccHHHHHHHcccccccccccccccccccccccHHHccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccEEcccccccccccccccccccccEEEEEEccccccccccccccccccccccEEEEEEEccccccccccccccccEEcccccEEEEEEEEcccccccccccccccEccccccEEcccccEEcccccccccccccccEccccHHHHHHHHcccccccccccccccccccccccccccEccccHcEEcccccccccccccEEccccccccEEccHHHHHHHHHHHHccccEEccccccccEEccHHHHHHHHccccccccEEccccccEEccHHHHHHHHHHHHccccccccHccccEccccHHHHHHHHcccccccEccc
Coil and Loop (DISEMBL)
mnstpprtpspllsttsipvSVIMKVnkdgtcipdpfgiremkpkqikDISLKKMLNVQDMRKKCVQMNNEETSYNILKSLKYKMSDRKEMIFVeskdtnrdketseEAANhetknacvntkstcvpleasenEAFQANIQmdasttcadmtsfvpalprsqnlniaqsisngfpdmlpnpnpsspsygpgpqtviftggsfipvdkssplfifdkkpvnsvksncpsflffaqpprenkeivtsnkikksnkpatndprrrifecnyencgknyfksshLKAHMRthtgerpflcqwtgcgrrfsrsdelsrhkrthtgekkfgcsicnrrfmrsdHLAKHVkrhskdgaitpsnigtpsnvLRNANVAFNMMVtnlphpvpa
Flexible Loop (DISEMBL)
mnstpprtpspllsttsipvsVIMKVNKDgtcipdpfgiremkpkqiKDISLKKMLNVQDMRKKCvqmnneetsyNILKSLKYKMSDRKEMIFveskdtnrdketseeaanhetknacvnTKSTCVPLEASENEAFQANIQMDASTTCADMTSFVPALPRSQNLNIAQSISNGFPDMLPNPNPSSPSYGPGPQTVIFTGGSFIPVDKSSPLFIFDKKPVNSVKSNCPSFlffaqpprenkeivtsnkikksnkpatndprrrIFECNYENCGKNYFKSSHLKAHMRTHTgerpflcqwtgcgrrfsrsdelsrhkrthtgekkfgcsicnrrfMRSDHLAKHVkrhskdgaitpsnigtpsnVLRNANVAFNMMVTNLPHPVPA
Low Complexity Region (SEG)
MNstpprtpspllsttsIPVSVIMKVNKDGTCIPDPFGIREMKPKQIKDISLKKMLNVQDMRKKCVQMNNEETSYNILKSLKYKMSDRKEMIFVESKDTNRDKETSEEAANHETKNACVNTKSTCVPLEASENEAFQANIQMDASTTCADMTSFVPALPRSQNLNIAQSISNGFPDMLpnpnpsspsygpgpQTVIFTGGSFIPVDKSSPLFIFDKKPVNSVKSNCPSFLFFAQPPRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVAFNMMVTNLPHPVPA
Disordered region (IsUnstruct)
*****************IPVSVIMKVNKDGTCIPDPFGIREM****IKDISLKKMLNVQDMRKKCVQ******SYNILKSLKY****************************************************************CA****F***************************************TVIFTGGSFIPVDKSSPLFIFDKKPVNSVKSNCPSFLFFA****************************RIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRF*****************KFGCSICNRRFMRS**************************VLRNANVAFNMMV*********
Disordered Region (DISOPRED)
***TPPR*****************************************************************************************************************************************************************************************************************************************************************ECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHV*****************************************
Disordered Region (DISEMBL)
************LSTTSIPVSVIMKVNKDGTCIPDPFGIREMKPKQIKDISLKKMLNVQDMRKKCVQMNNEETSYNILKSLKYKMSDRKEMIFVESK******************NACVNTKSTCVPLEASENEAFQANIQMDASTTCADMTSFVPALPRSQNLNIAQSISNGFPDMLPNPNPSSPSYGPGPQTVIFTGGSFIPVDKSSPLFIFDKKPVNSVKSNCPSFLFFAQPPRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVAFNMMVTNLPHPVPA
Disordered Region (DISPRO)
****************************DGTCIPDPF***********DISLKKMLNVQDMRKKCVQMNNEETSYNILKSLKYKMSDRKEMIFVESKDTNRDKETSEEAANHETKNACVNTKSTCVPLEASENEAFQANIQMDASTTCADMTSFVPALPRSQNLNIAQSISNGFPDMLPNPNPSSPSYGPGPQTVIFTGGSFIPVDKSSPLFIFDKKPVNSVKSNCPSFLFFAQPPRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVAFNMMVTNLPHPVPA
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNSTPPRTPSPLLSTTSIPVSVIMKVNKDGTCIPDPFGIREMKPKQIKDISLKKMLNVQDMRKKCVQMNNEETSYNILKSLKYKMSDRKEMIFVESKDTNRDKETSEEAANHETKNACVNTKSTCVPLEASENEAFQANIQMDASTTCADMTSFVPALPRSQNLNIAQSISNGFPDMLPNPNPSSPSYGPGPQTVIFTGGSFIPVDKSSPLFIFDKKPVNSVKSNCPSFLFFAQPPRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVAFNMMVTNLPHPVPA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	384	2.2.26 [Sep-21-2011]
O08876	480	Krueppel-like factor 10 O	yes	N/A	0.236	0.189	0.688	7e-37
O89091	479	Krueppel-like factor 10 O	yes	N/A	0.236	0.189	0.688	1e-36
Q8K1S5	502	Krueppel-like factor 11 O	no	N/A	0.236	0.181	0.677	1e-36
Q13118	480	Krueppel-like factor 10 O	yes	N/A	0.218	0.175	0.688	1e-36
O14901	512	Krueppel-like factor 11 O	no	N/A	0.236	0.177	0.666	1e-35
O89090	784	Transcription factor Sp1	no	N/A	0.369	0.181	0.443	2e-35
P08047	785	Transcription factor Sp1	no	N/A	0.330	0.161	0.526	5e-35
Q01714	786	Transcription factor Sp1	no	N/A	0.320	0.156	0.531	6e-35
Q02446	784	Transcription factor Sp4	no	N/A	0.239	0.117	0.623	1e-34
Q62445	782	Transcription factor Sp4	no	N/A	0.226	0.111	0.643	3e-34

>sp|O08876|KLF10_RAT Krueppel-like factor 10 OS=Rattus norvegicus GN=Klf10 PE=2 SV=1

 Score =  155 bits (391), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 64/93 (68%), Positives = 74/93 (79%)

Query: 254 PATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSR 313
           P  +  R R   C++  CGK YFKSSHLKAH+RTHTGE+PF C W GC RRF+RSDELSR
Sbjct: 359 PQIDSSRVRSHICSHPGCGKTYFKSSHLKAHVRTHTGEKPFSCSWKGCERRFARSDELSR 418

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
           H+RTHTGEKKF C +C+RRFMRSDHL KH +RH
Sbjct: 419 HRRTHTGEKKFACPMCDRRFMRSDHLTKHARRH 451

Transcriptional repressor involved in the regulation of cell growth. Inhibits cell growth.
Rattus norvegicus (taxid: 10116)

>sp|O89091|KLF10_MOUSE Krueppel-like factor 10 OS=Mus musculus GN=Klf10 PE=2 SV=1

 Score =  154 bits (389), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 64/93 (68%), Positives = 74/93 (79%)

Query: 254 PATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSR 313
           P  +  R R   C++  CGK YFKSSHLKAH+RTHTGE+PF C W GC RRF+RSDELSR
Sbjct: 358 PQIDSSRVRSHICSHPGCGKTYFKSSHLKAHVRTHTGEKPFSCSWKGCERRFARSDELSR 417

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
           H+RTHTGEKKF C +C+RRFMRSDHL KH +RH
Sbjct: 418 HRRTHTGEKKFACPMCDRRFMRSDHLTKHARRH 450

Transcriptional repressor involved in the regulation of cell growth. Inhibits cell growth.

Mus musculus (taxid: 10090)

>sp|Q8K1S5|KLF11_MOUSE Krueppel-like factor 11 OS=Mus musculus GN=Klf11 PE=2 SV=3

 Score =  154 bits (388), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 63/93 (67%), Positives = 75/93 (80%)

Query: 254 PATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSR 313
           P  +  RRR + CN+  C K YFKSSHLKAH+RTHTGE+PF C W GC ++F+RSDELSR
Sbjct: 374 PQVDFSRRRNYVCNFPGCRKTYFKSSHLKAHLRTHTGEKPFTCSWDGCDKKFARSDELSR 433

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
           H+RTHTGEKKF C +C+RRFMRSDHL KH +RH
Sbjct: 434 HRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRH 466

Transcription factor. Activates the epsilon- and gamma-globin gene promoters and, to a much lower degree, the beta-globin gene and represses promoters containing SP1-like binding sites inhibiting cell growth (By similarity). Represses transcription of SMAD7 which enhances TGF-beta signaling. Induces apoptosis.

Mus musculus (taxid: 10090)

>sp|Q13118|KLF10_HUMAN Krueppel-like factor 10 OS=Homo sapiens GN=KLF10 PE=1 SV=1

 Score =  154 bits (388), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 64/93 (68%), Positives = 73/93 (78%)

Query: 254 PATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSR 313
           P  +  R R   C++  CGK YFKSSHLKAH RTHTGE+PF C W GC RRF+RSDELSR
Sbjct: 359 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSR 418

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
           H+RTHTGEKKF C +C+RRFMRSDHL KH +RH
Sbjct: 419 HRRTHTGEKKFACPMCDRRFMRSDHLTKHARRH 451

Transcriptional repressor involved in the regulation of cell growth. Inhibits cell growth. Binds to the consensus sequence 5'-GGTGTG-3'.

Homo sapiens (taxid: 9606)

>sp|O14901|KLF11_HUMAN Krueppel-like factor 11 OS=Homo sapiens GN=KLF11 PE=1 SV=2

 Score =  151 bits (381), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 62/93 (66%), Positives = 75/93 (80%)

Query: 254 PATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSR 313
           P  +  RRR + C++  C K YFKSSHLKAH+RTHTGE+PF C W GC ++F+RSDELSR
Sbjct: 384 PQVDFSRRRNYVCSFPGCRKTYFKSSHLKAHLRTHTGEKPFNCSWDGCDKKFARSDELSR 443

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
           H+RTHTGEKKF C +C+RRFMRSDHL KH +RH
Sbjct: 444 HRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRH 476

Transcription factor. Activates the epsilon- and gamma-globin gene promoters and, to a much lower degree, the beta-globin gene and represses promoters containing SP1-like binding inhibiting cell growth. Represses transcription of SMAD7 which enhances TGF-beta signaling. Induces apoptosis.

Homo sapiens (taxid: 9606)

>sp|O89090|SP1_MOUSE Transcription factor Sp1 OS=Mus musculus GN=Sp1 PE=1 SV=2

 Score =  150 bits (378), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/176 (44%), Positives = 99/176 (56%), Gaps = 34/176 (19%)

Query: 237 RENKEIVTSNKIKKSNKPATNDP-RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFL 295
           R  +E  T    K S   A+ DP +++   C+ + CGK Y K+SHL+AH+R HTGERPF+
Sbjct: 599 RTRREACTCPYCKDSEGRASGDPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGERPFM 658

Query: 296 CQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH--------- 346
           C W+ CG+RF+RSDEL RHKRTHTGEKKF C  C +RFMRSDHL+KH+K H         
Sbjct: 659 CNWSYCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGPGV 718

Query: 347 -------------SKDGAITPSNIGT----------PSNVLRNANVAFNMM-VTNL 378
                          +G  TPS + T          P  + R AN   N+M VT L
Sbjct: 719 ALSVGTLPLDSGAGSEGTATPSALITTNMVAMEAICPEGIARLANSGINVMQVTEL 774

Transcription factor that can activate or repress transcription in response to physiological and pathological stimuli. Binds with high affinity to GC-rich motifs and regulates the expression of a large number of genes involved in a variety of processes such as cell growth, apoptosis, differentiation and immune responses. Highly regulated by post-translational modifications (phosphorylations, sumoylation, proteolytic cleavage, glycosylation and acetylation). Binds also the PDGFR-alpha G-box promoter. May have a role in modulating the cellular response to DNA damage. Implicated in chromatin remodeling. Plays a role in the recruitment of SMARCA4/BRG1 on the c-FOS promoter Plays an essential role in the regulation of FE65 gene expression.

Mus musculus (taxid: 10090)

>sp|P08047|SP1_HUMAN Transcription factor Sp1 OS=Homo sapiens GN=SP1 PE=1 SV=3

 Score =  149 bits (375), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 70/133 (52%), Positives = 89/133 (66%), Gaps = 6/133 (4%)

Query: 233 AQPP---RENKEIVTSNKIKKSNKPATNDP-RRRIFECNYENCGKNYFKSSHLKAHMRTH 288
           AQP    R  +E  T    K S    + DP +++   C+ + CGK Y K+SHL+AH+R H
Sbjct: 591 AQPQAGRRTRREACTCPYCKDSEGRGSGDPGKKKQHICHIQGCGKVYGKTSHLRAHLRWH 650

Query: 289 TGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS- 347
           TGERPF+C W+ CG+RF+RSDEL RHKRTHTGEKKF C  C +RFMRSDHL+KH+K H  
Sbjct: 651 TGERPFMCTWSYCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQN 710

Query: 348 -KDGAITPSNIGT 359
            K G     ++GT
Sbjct: 711 KKGGPGVALSVGT 723

Transcription factor that can activate or repress transcription in response to physiological and pathological stimuli. Binds with high affinity to GC-rich motifs and regulates the expression of a large number of genes involved in a variety of processes such as cell growth, apoptosis, differentiation and immune responses. Highly regulated by post-translational modifications (phosphorylations, sumoylation, proteolytic cleavage, glycosylation and acetylation). Binds also the PDGFR-alpha G-box promoter. May have a role in modulating the cellular response to DNA damage. Implicated in chromatin remodeling. Plays a role in the recruitment of SMARCA4/BRG1 on the c-FOS promoter. Plays an essential role in the regulation of FE65 gene expression. In complex with ATF7IP, maintains telomerase activity in cancer cells by inducing TERT and TERC gene expression.

Homo sapiens (taxid: 9606)

>sp|Q01714|SP1_RAT Transcription factor Sp1 OS=Rattus norvegicus GN=Sp1 PE=1 SV=2

 Score =  148 bits (374), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 67/126 (53%), Positives = 86/126 (68%), Gaps = 3/126 (2%)

Query: 237 RENKEIVTSNKIKKSNKPATNDP-RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFL 295
           R  +E  T    K S    + DP +++   C+ + CGK Y K+SHL+AH+R HTGERPF+
Sbjct: 599 RTRREACTCPYCKDSEGRGSGDPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGERPFM 658

Query: 296 CQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS--KDGAIT 353
           C W+ CG+RF+RSDEL RHKRTHTGEKKF C  C +RFMRSDHL+KH+K H   K G   
Sbjct: 659 CNWSYCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGPGV 718

Query: 354 PSNIGT 359
             ++GT
Sbjct: 719 ALSVGT 724

Transcription factor that can activate or repress transcription in response to physiological and pathological stimuli. Binds with high affinity to GC-rich motifs and regulates the expression of a large number of genes involved in a variety of processes such as cell growth, apoptosis, differentiation and immune responses. Highly regulated by post-translational modifications (phosphorylations, sumoylation, proteolytic cleavage, glycosylation and acetylation). Binds also the PDGFR-alpha G-box promoter. May have a role in modulating the cellular response to DNA damage. Implicated in chromatin remodeling. Plays an essential role in the regulation of FE65 gene expression (By similarity). Plays a role in the recruitment of SMARCA4/BRG1 on the c-FOS promoter.

Rattus norvegicus (taxid: 10116)

>sp|Q02446|SP4_HUMAN Transcription factor Sp4 OS=Homo sapiens GN=SP4 PE=1 SV=2

 Score =  147 bits (371), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 58/93 (62%), Positives = 75/93 (80%), Gaps = 1/93 (1%)

Query: 255 ATNDP-RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSR 313
            +N+P +++   C+ E CGK Y K+SHL+AH+R HTGERPF+C W  CG+RF+RSDEL R
Sbjct: 637 GSNEPGKKKQHICHIEGCGKVYGKTSHLRAHLRWHTGERPFICNWMFCGKRFTRSDELQR 696

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
           H+RTHTGEK+F C  C++RFMRSDHL+KHVK H
Sbjct: 697 HRRTHTGEKRFECPECSKRFMRSDHLSKHVKTH 729

Binds to GT and GC boxes promoters elements. Probable transcriptional activator.

Homo sapiens (taxid: 9606)

>sp|Q62445|SP4_MOUSE Transcription factor Sp4 OS=Mus musculus GN=Sp4 PE=2 SV=2

 Score =  146 bits (368), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 56/87 (64%), Positives = 71/87 (81%)

Query: 260 RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHT 319
           +++   C+ E CGK Y K+SHL+AH+R HTGERPF+C W  CG+RF+RSDEL RH+RTHT
Sbjct: 641 KKKQHVCHIEGCGKVYGKTSHLRAHLRWHTGERPFICNWMFCGKRFTRSDELQRHRRTHT 700

Query: 320 GEKKFGCSICNRRFMRSDHLAKHVKRH 346
           GEK+F C  C++RFMRSDHL+KHVK H
Sbjct: 701 GEKRFECPECSKRFMRSDHLSKHVKTH 727

Binds to GT and GC boxes promoters elements. Probable transcriptional activator. Required for normal male reproductive behavior.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	384
321476261	482	putative KLF11 [Daphnia pulex]	0.786	0.626	0.384	1e-44
242011176	307	transforming growth factor-beta-inducibl	0.695	0.869	0.374	2e-44
357611812	328	hypothetical protein KGM_22205 [Danaus p	0.247	0.289	0.821	1e-42
312379063	703	hypothetical protein AND_09163 [Anophele	0.257	0.140	0.767	3e-42
345495953	320	PREDICTED: hypothetical protein LOC10067	0.265	0.318	0.735	4e-42
170061299	390	cabut [Culex quinquefasciatus] gi|167879	0.25	0.246	0.793	5e-42
157113811	421	zinc finger protein [Aedes aegypti] gi|1	0.234	0.213	0.822	1e-41
383864530	373	PREDICTED: uncharacterized protein LOC10	0.236	0.243	0.721	2e-41
195470280	428	cabut [Drosophila yakuba] gi|194173537|g	0.296	0.266	0.652	4e-41
195350117	428	cabut [Drosophila sechellia] gi|19412336	0.239	0.214	0.760	1e-40

>gi|321476261|gb|EFX87222.1| putative KLF11 [Daphnia pulex]

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/356 (38%), Positives = 184/356 (51%), Gaps = 54/356 (15%)

Query: 14  STTSIPVSVIMKVNKDGTCIP---DPFGIREMKPKQIKDISLKKMLNVQDMRKKCVQMNN 70
           S TS+PVSVIM   KDGT  P        +E   ++ +D   K M       ++ + + N
Sbjct: 108 SVTSMPVSVIMIGKKDGTAEPVQQQQQQQQEFNHEEAQDNKEKLMGGPALPGRQIIFVEN 167

Query: 71  EETSYNILKSLKYKMSDRKEMIFVESKDTNRDKETSEEAANHETKNACVNTK------ST 124
           + T+ + L++  +      E IFV +KDTNR+   + E  NH+      N        S+
Sbjct: 168 KNTNRH-LRNAHFG----TEQIFVANKDTNRE---AREITNHKPPPNNNNNNINNNENSS 219

Query: 125 CVPLEASENEAFQANIQMDASTTCADMTSFVPALPRSQNLNIAQSISNGFPDMLPNPNPS 184
            V ++      F   + M A+T+         A+P    + IA       P ++ N    
Sbjct: 220 DVFVQQFSVSRFVPEMTMPATTS--------QAIPIKSPVAIA-------PKLMLN---- 260

Query: 185 SPSYGPGPQTVIFTGGSFIPVDKSSPLFIFDKKPVNSVKSNCPSFLFFAQPPRENKEIVT 244
             S   G   VI  G S   V    PL       + S+ +N  + LF A  P +N   +T
Sbjct: 261 --SAALGNCNVI-NGSSATRVIPVVPLGATGAD-IGSMGANGAT-LFLA--PCDNNGQIT 313

Query: 245 SNKIKKSNKPATN-----------DPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERP 293
              +  +  P+             D RRRI+EC +E CGKNYFKSSHLKAHMRTHTGE+P
Sbjct: 314 HFVLTTAGIPSMTLIAPNKMEREVDKRRRIYECQFEGCGKNYFKSSHLKAHMRTHTGEKP 373

Query: 294 FLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKD 349
           F+C W GC RRFSRSDELSRHKRTHTGEKKF C +C RRFMRSDHL KHV+RH+++
Sbjct: 374 FVCSWDGCDRRFSRSDELSRHKRTHTGEKKFSCPVCQRRFMRSDHLTKHVRRHARE 429

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242011176|ref|XP_002426331.1| transforming growth factor-beta-inducible early growth response protein, putative [Pediculus humanus corporis] gi|212510408|gb|EEB13593.1| transforming growth factor-beta-inducible early growth response protein, putative [Pediculus humanus corporis]

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/342 (37%), Positives = 174/342 (50%), Gaps = 75/342 (21%)

Query: 24  MKVNKDGTCIPDP-------FGIREMK---PKQ--IKDISLKKMLNVQDMRKKCVQMNNE 71
           MK++KDGT    P       F + E     P++  IKDI+ +K +N +  +       NE
Sbjct: 1   MKIHKDGTLSSKPIDDIDLSFSMDEKHQSNPRENIIKDINNEKNVNCEVKKDYSRNEWNE 60

Query: 72  -ETSYNILKSLKYKMSDRKEMIFVESKDTNRDKETSEEAANHETKNACVNTKSTCVPLEA 130
            + S NILKSLKYK++  K+ +  ++    +D  T+E   +   +  C  T+++   LE 
Sbjct: 61  LDNSINILKSLKYKLNLIKKEVLGDNNGKKKDVVTNETTKDGSVE-ICSTTETSKKRLEN 119

Query: 131 SENEAFQANIQMDASTTCADMTSFVPALPRSQNLNIAQSISNGFPDMLPNPNPSSPSYGP 190
             N+      +   +TTCA+                                  +P    
Sbjct: 120 CNNK------KTVKTTTCAN----------------------------------NPLVTI 139

Query: 191 GPQTVIFTGGSFIPVDKSSPLFIFDKKPVNSVKSNCPSFLFFAQPPRENKEIVTSNKIKK 250
            P+ V  T G  I +            P N +  N P  +F A P         SN I +
Sbjct: 140 APKPVFLTSGKLISIS-----------PSNIIVGNQPVVVFAAAP-------TPSNLIPQ 181

Query: 251 SNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDE 310
              P   D R+RIF+C +  C KNYFKSSHLKAHMRTHTGE+PF CQW GC R+FSRSDE
Sbjct: 182 ---PPLPDKRQRIFKCQHLGCTKNYFKSSHLKAHMRTHTGEKPFSCQWEGCNRQFSRSDE 238

Query: 311 LSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAI 352
           LSRHKRTHTGEKKF C++C+ +FMRSDHL KH KRH++ G+I
Sbjct: 239 LSRHKRTHTGEKKFVCNVCSMKFMRSDHLTKHSKRHTRTGSI 280

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357611812|gb|EHJ67660.1| hypothetical protein KGM_22205 [Danaus plexippus]

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 78/95 (82%), Positives = 85/95 (89%)

Query: 260 RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHT 319
           RRR++EC+Y  CGKNYFKSSHLKAH RTHTGERPF C W+GC RRFSRSDELSRHKRTHT
Sbjct: 211 RRRLYECSYPGCGKNYFKSSHLKAHARTHTGERPFKCGWSGCERRFSRSDELSRHKRTHT 270

Query: 320 GEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITP 354
           GEKKFGC +CNRRFMRSDHLAKHVKRH+K+ A  P
Sbjct: 271 GEKKFGCRVCNRRFMRSDHLAKHVKRHAKERAPAP 305

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312379063|gb|EFR25463.1| hypothetical protein AND_09163 [Anopheles darlingi]

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 76/99 (76%), Positives = 85/99 (85%)

Query: 253 KPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELS 312
           +P     RRRI+EC++ NCGKNYFKSSHLKAH R HTGERPF C+W  CGRRFSRSDELS
Sbjct: 489 QPGGKVERRRIYECDHPNCGKNYFKSSHLKAHQRIHTGERPFNCKWPDCGRRFSRSDELS 548

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGA 351
           RHKRTHTGEKKF C +C+RRFMRSDHL+KHVKRH+KDG 
Sbjct: 549 RHKRTHTGEKKFVCHVCDRRFMRSDHLSKHVKRHNKDGG 587

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345495953|ref|XP_003427609.1| PREDICTED: hypothetical protein LOC100678159 [Nasonia vitripennis]

 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 75/102 (73%), Positives = 87/102 (85%)

Query: 260 RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHT 319
           RRR++EC +  CGKNYFKSSHLKAH RTHTGERPF C +  CGRRFSRSDELSRHKRTHT
Sbjct: 190 RRRVYECEHPGCGKNYFKSSHLKAHTRTHTGERPFPCPYEDCGRRFSRSDELSRHKRTHT 249

Query: 320 GEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPS 361
           GEKKF C++C RRFMRSDHLAKHVKRH++D  +  +N G+P+
Sbjct: 250 GEKKFACAVCQRRFMRSDHLAKHVKRHARDRGVNAANNGSPA 291

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170061299|ref|XP_001866174.1| cabut [Culex quinquefasciatus] gi|167879575|gb|EDS42958.1| cabut [Culex quinquefasciatus]

 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 77/97 (79%), Positives = 84/97 (86%), Gaps = 1/97 (1%)

Query: 254 PATNDP-RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELS 312
           PA   P RRRI+EC + NCGKNYFKSSHLKAH R HTGERPF+C+W  CGRRFSRSDELS
Sbjct: 258 PAPQKPERRRIYECEHPNCGKNYFKSSHLKAHQRIHTGERPFICKWADCGRRFSRSDELS 317

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKD 349
           RHKRTHTGEKKF C +C RRFMRSDHL+KHVKRH+KD
Sbjct: 318 RHKRTHTGEKKFVCPVCQRRFMRSDHLSKHVKRHNKD 354

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157113811|ref|XP_001652097.1| zinc finger protein [Aedes aegypti] gi|108877535|gb|EAT41760.1| AAEL006609-PA [Aedes aegypti]

 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 74/90 (82%), Positives = 81/90 (90%)

Query: 260 RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHT 319
           RRRI+EC + NCGKNYFKSSHLKAH R HTGERPF+C+W  CGRRFSRSDELSRHKRTHT
Sbjct: 290 RRRIYECEHPNCGKNYFKSSHLKAHQRIHTGERPFICKWPDCGRRFSRSDELSRHKRTHT 349

Query: 320 GEKKFGCSICNRRFMRSDHLAKHVKRHSKD 349
           GEKKF C +C RRFMRSDHL+KHVKRH+KD
Sbjct: 350 GEKKFVCPVCQRRFMRSDHLSKHVKRHNKD 379

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383864530|ref|XP_003707731.1| PREDICTED: uncharacterized protein LOC100877144 [Megachile rotundata]

 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 75/104 (72%), Positives = 87/104 (83%)

Query: 260 RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHT 319
           RRR++EC +  CGKNYFKSSHLKAH RTHTGERPF C +  C RRFSRSDELSRHKRTHT
Sbjct: 236 RRRVYECEHPGCGKNYFKSSHLKAHTRTHTGERPFSCPYKDCSRRFSRSDELSRHKRTHT 295

Query: 320 GEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNV 363
           GEKKF C++C RRFMRSDHLAKHVKRH++D + + S  G P++V
Sbjct: 296 GEKKFACTVCQRRFMRSDHLAKHVKRHARDRSSSVSGNGVPTSV 339

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195470280|ref|XP_002087436.1| cabut [Drosophila yakuba] gi|194173537|gb|EDW87148.1| cabut [Drosophila yakuba]

 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 77/118 (65%), Positives = 96/118 (81%), Gaps = 4/118 (3%)

Query: 234 QPPRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERP 293
           +PP  ++E +T+ +I  +   AT   R RI+EC++ +CGKNYFKSSHLKAH R HTGERP
Sbjct: 237 KPPTMSEEKLTT-RITAAQAAAT---RSRIYECSFPDCGKNYFKSSHLKAHQRVHTGERP 292

Query: 294 FLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGA 351
           F+C+W  C +RFSRSDELSRHKRTHTGEKKF CS+C ++FMRSDHL+KHVKRH+KD A
Sbjct: 293 FICKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKRHNKDKA 350

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195350117|ref|XP_002041588.1| cabut [Drosophila sechellia] gi|194123361|gb|EDW45404.1| cabut [Drosophila sechellia]

 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 70/92 (76%), Positives = 82/92 (89%)

Query: 260 RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHT 319
           R RI+EC++ +CGKNYFKSSHLKAH R HTGERPF+C+W  C +RFSRSDELSRHKRTHT
Sbjct: 259 RSRIYECSFPDCGKNYFKSSHLKAHQRVHTGERPFICKWENCDKRFSRSDELSRHKRTHT 318

Query: 320 GEKKFGCSICNRRFMRSDHLAKHVKRHSKDGA 351
           GEKKF CS+C ++FMRSDHL+KHVKRH+KD A
Sbjct: 319 GEKKFQCSVCQKKFMRSDHLSKHVKRHNKDKA 350

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	384
FB|FBgn0043364	428	cbt "cabut" [Drosophila melano	0.361	0.324	0.566	1.8e-42
MGI|MGI:2653368	502	Klf11 "Kruppel-like factor 11"	0.242	0.185	0.677	1.1e-38
UNIPROTKB|G3MWM1	505	KLF11 "Uncharacterized protein	0.252	0.192	0.649	1.7e-38
RGD|1306646	501	Klf11 "Kruppel-like factor 11"	0.242	0.185	0.677	3.5e-38
UNIPROTKB|E9PTS6	501	Klf11 "Protein Klf11" [Rattus	0.242	0.185	0.677	3.5e-38
UNIPROTKB|F1NKT6	530	KLF11 "Uncharacterized protein	0.252	0.183	0.659	4.5e-38
UNIPROTKB|B4YSE7	480	KLF10 "Uncharacterized protein	0.242	0.193	0.698	1.5e-37
UNIPROTKB|E2R7L3	518	KLF11 "Uncharacterized protein	0.242	0.179	0.677	1.5e-37
UNIPROTKB|E2RSL9	479	KLF10 "Uncharacterized protein	0.242	0.194	0.698	1.9e-37
UNIPROTKB|O14901	512	KLF11 "Krueppel-like factor 11	0.242	0.181	0.666	1.9e-37

FB|FBgn0043364 cbt "cabut" [Drosophila melanogaster (taxid:7227)]

 Score = 427 (155.4 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
 Identities = 81/143 (56%), Positives = 107/143 (74%)

Query:   236 PRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFL 295
             P  ++E +T+ +I  +   AT   R RI+EC++ +CGKNYFKSSHLKAH R HTGERPF+
Sbjct:   239 PTMSEEKLTT-RITAAQAAAT---RSRIYECSFPDCGKNYFKSSHLKAHQRVHTGERPFI 294

Query:   296 CQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS 355
             C+W  C +RFSRSDELSRHKRTHTGEKKF CS+C ++FMRSDHL+KHVKRH+KD A   +
Sbjct:   295 CKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKRHNKDKANGVN 354

Query:   356 NIGTPSNVLRNANVAFNMMVTNL 378
                + +N   +A+VA ++   +L
Sbjct:   355 RHVSLANNNTSASVAASLCDASL 377

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISS

GO:0007423 "sensory organ development" evidence=IMP

GO:0035071 "salivary gland cell autophagic cell death" evidence=IEP

GO:0048102 "autophagic cell death" evidence=IEP

GO:0001736 "establishment of planar polarity" evidence=NAS

GO:0007390 "germ-band shortening" evidence=NAS

GO:0007391 "dorsal closure" evidence=IMP;NAS

GO:0048592 "eye morphogenesis" evidence=NAS

GO:0007254 "JNK cascade" evidence=NAS

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=ISS

GO:0048190 "wing disc dorsal/ventral pattern formation" evidence=IGI

GO:0090098 "positive regulation of decapentaplegic signaling pathway" evidence=IMP

GO:0007472 "wing disc morphogenesis" evidence=IMP

MGI|MGI:2653368 Klf11 "Kruppel-like factor 11" [Mus musculus (taxid:10090)]

 Score = 381 (139.2 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
 Identities = 63/93 (67%), Positives = 75/93 (80%)

Query:   254 PATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSR 313
             P  +  RRR + CN+  C K YFKSSHLKAH+RTHTGE+PF C W GC ++F+RSDELSR
Sbjct:   374 PQVDFSRRRNYVCNFPGCRKTYFKSSHLKAHLRTHTGEKPFTCSWDGCDKKFARSDELSR 433

Query:   314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
             H+RTHTGEKKF C +C+RRFMRSDHL KH +RH
Sbjct:   434 HRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRH 466

GO:0000115 "regulation of transcription involved in S phase of mitotic cell cycle" evidence=ISO

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=ISO

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IC

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=ISO

GO:0030097 "hemopoiesis" evidence=IMP

GO:0043065 "positive regulation of apoptotic process" evidence=ISO

GO:0044212 "transcription regulatory region DNA binding" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|G3MWM1 KLF11 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 375 (137.1 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
 Identities = 63/97 (64%), Positives = 77/97 (79%)

Query:   250 KSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSD 309
             +S  P  +  RRR + C++  C K YFKSSHLKAH+RTHTGE+PF C W GC ++F+RSD
Sbjct:   371 QSCAPQVDFSRRRNYVCHFPGCRKTYFKSSHLKAHLRTHTGEKPFGCSWDGCNKKFARSD 430

Query:   310 ELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
             ELSRH+RTHTGEKKF C +C+RRFMRSDHL KH +RH
Sbjct:   431 ELSRHRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRH 467

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

GO:0043065 "positive regulation of apoptotic process" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0000115 "regulation of transcription involved in S phase of mitotic cell cycle" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

RGD|1306646 Klf11 "Kruppel-like factor 11" [Rattus norvegicus (taxid:10116)]

 Score = 381 (139.2 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
 Identities = 63/93 (67%), Positives = 75/93 (80%)

Query:   254 PATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSR 313
             P  +  RRR + CN+  C K YFKSSHLKAH+RTHTGE+PF C W GC ++F+RSDELSR
Sbjct:   373 PQVDFSRRRNYVCNFPGCRKTYFKSSHLKAHLRTHTGEKPFTCSWDGCDKKFARSDELSR 432

Query:   314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
             H+RTHTGEKKF C +C+RRFMRSDHL KH +RH
Sbjct:   433 HRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRH 465

GO:0000115 "regulation of transcription involved in S phase of mitotic cell cycle" evidence=ISO

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=ISO

GO:0003674 "molecular_function" evidence=ND

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0005575 "cellular_component" evidence=ND

GO:0008285 "negative regulation of cell proliferation" evidence=ISO

GO:0043065 "positive regulation of apoptotic process" evidence=ISO

GO:0044212 "transcription regulatory region DNA binding" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO

GO:1901653 "cellular response to peptide" evidence=IEP

GO:0030097 "hemopoiesis" evidence=ISO

UNIPROTKB|E9PTS6 Klf11 "Protein Klf11" [Rattus norvegicus (taxid:10116)]

 Score = 381 (139.2 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
 Identities = 63/93 (67%), Positives = 75/93 (80%)

Query:   254 PATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSR 313
             P  +  RRR + CN+  C K YFKSSHLKAH+RTHTGE+PF C W GC ++F+RSDELSR
Sbjct:   373 PQVDFSRRRNYVCNFPGCRKTYFKSSHLKAHLRTHTGEKPFTCSWDGCDKKFARSDELSR 432

Query:   314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
             H+RTHTGEKKF C +C+RRFMRSDHL KH +RH
Sbjct:   433 HRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRH 465

GO:0000115 "regulation of transcription involved in S phase of mitotic cell cycle" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0043065 "positive regulation of apoptotic process" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

UNIPROTKB|F1NKT6 KLF11 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 382 (139.5 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
 Identities = 64/97 (65%), Positives = 76/97 (78%)

Query:   250 KSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSD 309
             +S  P  +  RRR + CN+  C K YFKSSHLKAH+RTHTGE+PF C W GC ++F+RSD
Sbjct:   390 QSCTPQMDFSRRRNYVCNFPGCKKTYFKSSHLKAHLRTHTGEKPFSCNWEGCDKKFARSD 449

Query:   310 ELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
             ELSRH+RTHTGEKKF C +C RRFMRSDHL KH +RH
Sbjct:   450 ELSRHRRTHTGEKKFACPVCERRFMRSDHLTKHTRRH 486

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000115 "regulation of transcription involved in S phase of mitotic cell cycle" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0043065 "positive regulation of apoptotic process" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

UNIPROTKB|B4YSE7 KLF10 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 381 (139.2 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
 Identities = 65/93 (69%), Positives = 74/93 (79%)

Query:   254 PATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSR 313
             P  +  R R   C++  CGK YFKSSHLKAHMRTHTGE+PF C W GC RRF+RSDELSR
Sbjct:   359 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHMRTHTGEKPFSCSWKGCERRFARSDELSR 418

Query:   314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
             H+RTHTGEKKF C +C+RRFMRSDHL KH +RH
Sbjct:   419 HRRTHTGEKKFACPMCDRRFMRSDHLTKHARRH 451

GO:0045672 "positive regulation of osteoclast differentiation" evidence=IEA

GO:0035019 "somatic stem cell maintenance" evidence=IEA

GO:0030282 "bone mineralization" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|E2R7L3 KLF11 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 378 (138.1 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
 Identities = 63/93 (67%), Positives = 75/93 (80%)

Query:   254 PATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSR 313
             P  +  RRR + CN+  C K YFKSSHLKAH+RTHTGE+PF C W GC ++F+RSDELSR
Sbjct:   390 PQVDFSRRRNYICNFPGCRKTYFKSSHLKAHLRTHTGEKPFNCNWDGCDKKFARSDELSR 449

Query:   314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
             H+RTHTGEKKF C +C+RRFMRSDHL KH +RH
Sbjct:   450 HRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRH 482

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

GO:0043065 "positive regulation of apoptotic process" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0000115 "regulation of transcription involved in S phase of mitotic cell cycle" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|E2RSL9 KLF10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 381 (139.2 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
 Identities = 65/93 (69%), Positives = 74/93 (79%)

Query:   254 PATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSR 313
             P  +  R R   C++  CGK YFKSSHLKAHMRTHTGE+PF C W GC RRF+RSDELSR
Sbjct:   358 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHMRTHTGEKPFSCSWKGCERRFARSDELSR 417

Query:   314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
             H+RTHTGEKKF C +C+RRFMRSDHL KH +RH
Sbjct:   418 HRRTHTGEKKFACPMCDRRFMRSDHLTKHARRH 450

GO:0045672 "positive regulation of osteoclast differentiation" evidence=IEA

GO:0035019 "somatic stem cell maintenance" evidence=IEA

GO:0030282 "bone mineralization" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|O14901 KLF11 "Krueppel-like factor 11" [Homo sapiens (taxid:9606)]

 Score = 374 (136.7 bits), Expect = 1.9e-37, Sum P(2) = 1.9e-37
 Identities = 62/93 (66%), Positives = 75/93 (80%)

Query:   254 PATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSR 313
             P  +  RRR + C++  C K YFKSSHLKAH+RTHTGE+PF C W GC ++F+RSDELSR
Sbjct:   384 PQVDFSRRRNYVCSFPGCRKTYFKSSHLKAHLRTHTGEKPFNCSWDGCDKKFARSDELSR 443

Query:   314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
             H+RTHTGEKKF C +C+RRFMRSDHL KH +RH
Sbjct:   444 HRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRH 476

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=TAS

GO:0006366 "transcription from RNA polymerase II promoter" evidence=TAS

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IDA

GO:0000115 "regulation of transcription involved in S phase of mitotic cell cycle" evidence=IDA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0043065 "positive regulation of apoptotic process" evidence=IDA

GO:0008285 "negative regulation of cell proliferation" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	384
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	6e-05
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	7e-04

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 39.3 bits (92), Expect = 6e-05
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 2/28 (7%)

Query: 280 HLKAHMRTHTGERPFLCQWTGCGRRFSR 307
           +L+ HMRTHTGE+P+ C    CG+ FS 
Sbjct: 1   NLRRHMRTHTGEKPYKC--PVCGKSFSS 26

Length = 26

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 36.2 bits (84), Expect = 7e-04
 Identities = 13/24 (54%), Positives = 16/24 (66%)

Query: 310 ELSRHKRTHTGEKKFGCSICNRRF 333
            L RH RTHTGEK + C +C + F
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSF 24

Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	384
KOG2462|consensus	279		99.95
KOG2462|consensus	279		99.81
KOG3576|consensus	267		99.69
KOG1074|consensus	958		99.6
KOG3623|consensus	1007		99.53
KOG3623|consensus	1007		99.42
KOG1074|consensus	958		99.41
KOG3608|consensus	467		99.39
KOG3576|consensus	267		99.39
KOG3608|consensus	467		99.36
PLN03086	567	PRLI-interacting factor K; Provisional	98.9
PHA00733	128	hypothetical protein	98.79
PHA00733	128	hypothetical protein	98.7
PHA02768	55	hypothetical protein; Provisional	98.59
PLN03086	567	PRLI-interacting factor K; Provisional	98.52
PHA02768	55	hypothetical protein; Provisional	98.49
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.43
KOG3993|consensus	500		98.08
PHA00616	44	hypothetical protein	98.05
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.99
KOG3993|consensus	500		97.8
PHA00732	79	hypothetical protein	97.74
PHA00732	79	hypothetical protein	97.7
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.59
PHA00616	44	hypothetical protein	97.57
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.53
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.49
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.22
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.85
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.83
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.73
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.5
smart00355	26	ZnF_C2H2 zinc finger.	96.38
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.31
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.11
COG5048	467	FOG: Zn-finger [General function prediction only]	95.87
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	95.72
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.48
PRK04860	160	hypothetical protein; Provisional	95.27
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	94.93
PRK04860	160	hypothetical protein; Provisional	94.75
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	94.41
COG5048	467	FOG: Zn-finger [General function prediction only]	94.08
COG5236	493	Uncharacterized conserved protein, contains RING Z	94.04
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	93.94
KOG2231|consensus	669		93.45
KOG2231|consensus	669		93.4
smart00355	26	ZnF_C2H2 zinc finger.	92.97
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	92.56
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	92.43
KOG4173|consensus	253		91.87
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	91.67
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	91.31
KOG4173|consensus	253		88.66
KOG1146|consensus	1406		87.79
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	87.56
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	87.15
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	85.56
KOG2893|consensus	341		83.94
KOG2785|consensus	390		83.86

>KOG2462|consensus

Probab=99.95  E-value=3.6e-28  Score=227.83  Aligned_cols=139  Identities=32%  Similarity=0.502  Sum_probs=131.3

Q ss_pred             ccccCCCCCCCccccchhhhhccCCCCCCCCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCCh
Q psy17740        229 FLFFAQPPRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRS  308 (384)
Q Consensus       229 ~~~~~qcp~c~k~~~t~~~lk~h~~~~~~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~  308 (384)
                      .....+|+.|++.+.+...|.+|...+.....++.|.|.+  |||.|.+...|++|+|+|+  -+++|.+  |||.|.+.
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~--C~K~YvSmpALkMHirTH~--l~c~C~i--CGKaFSRP  200 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKY--CGKVYVSMPALKMHIRTHT--LPCECGI--CGKAFSRP  200 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccccccccccCCC--CCceeeehHHHhhHhhccC--CCccccc--ccccccch
Confidence            3455699999999999999999999999988899999966  9999999999999999998  5688966  99999999


Q ss_pred             HHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchhhHHHHHHH
Q psy17740        309 DELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVAFNM  373 (384)
Q Consensus       309 ~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~~~hl~~  373 (384)
                      |.|+.|+|+|||||||.|+.|+|+|+.+++|+.||++|.+.+.|.|..|+|.|.+...|++|++.
T Consensus       201 WLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  201 WLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             HHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999864

>KOG2462|consensus

Probab=99.81  E-value=6.7e-21  Score=179.00  Aligned_cols=104  Identities=34%  Similarity=0.598  Sum_probs=97.7

Q ss_pred             CCCCCCCccccchhhhhccCCCCCCCCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHH
Q psy17740        233 AQPPRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELS  312 (384)
Q Consensus       233 ~qcp~c~k~~~t~~~lk~h~~~~~~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~  312 (384)
                      -+|+.|++.|++...++.|.+.+.     -++.|.+  |||.|.+...|+.|+|+|+|||||.|++  |+|+|+.+++|+
T Consensus       162 ~~C~~C~K~YvSmpALkMHirTH~-----l~c~C~i--CGKaFSRPWLLQGHiRTHTGEKPF~C~h--C~kAFADRSNLR  232 (279)
T KOG2462|consen  162 FSCKYCGKVYVSMPALKMHIRTHT-----LPCECGI--CGKAFSRPWLLQGHIRTHTGEKPFSCPH--CGKAFADRSNLR  232 (279)
T ss_pred             ccCCCCCceeeehHHHhhHhhccC-----CCccccc--ccccccchHHhhcccccccCCCCccCCc--ccchhcchHHHH
Confidence            389999999999999999998776     3578866  9999999999999999999999999976  999999999999


Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHH
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKR  345 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~  345 (384)
                      .||++|.+.|+|+|..|+|.|++.+.|.+|...
T Consensus       233 AHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  233 AHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             HHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            999999999999999999999999999999764

>KOG3576|consensus

Probab=99.69  E-value=7.4e-17  Score=145.44  Aligned_cols=111  Identities=27%  Similarity=0.582  Sum_probs=100.1

Q ss_pred             CCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHH
Q psy17740        260 RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHL  339 (384)
Q Consensus       260 ~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L  339 (384)
                      ....|.|.+  |+|.|....-|.+|++.|...+.|-|.+  |||+|....+|++|+|+|+|.+||+|..|+|+|..+..|
T Consensus       114 d~d~ftCrv--CgK~F~lQRmlnrh~kch~~vkr~lct~--cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsl  189 (267)
T KOG3576|consen  114 DQDSFTCRV--CGKKFGLQRMLNRHLKCHSDVKRHLCTF--CGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSL  189 (267)
T ss_pred             CCCeeeeeh--hhhhhhHHHHHHHHhhhccHHHHHHHhh--ccCcccchhhhhhhhccccCccccchhhhhHHHHhhccH
Confidence            356899977  9999999999999999999999999977  999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcC-----------CCCCCCCCCCCCccchhhHHHHHHHH
Q psy17740        340 AKHVKRHSK-----------DGAITPSNIGTPSNVLRNANVAFNMM  374 (384)
Q Consensus       340 ~~H~r~H~~-----------e~~~~c~~Cg~~~~~~~~~~~hl~~~  374 (384)
                      ..|++.-||           ++.|.|..||.+.......-.|+..+
T Consensus       190 eshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~  235 (267)
T KOG3576|consen  190 ESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLH  235 (267)
T ss_pred             HHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhc
Confidence            999886554           47899999999988777766666654

>KOG1074|consensus

Probab=99.60  E-value=1.2e-15  Score=160.27  Aligned_cols=60  Identities=18%  Similarity=0.249  Sum_probs=55.2

Q ss_pred             ccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchhhHHHHHHHHhhcCCCCC
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVAFNMMVTNLPHPV  382 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~~~hl~~~~~~l~~~~  382 (384)
                      |-+|-+|-|...-++.|+.|.|+|+||++|+|++||..|....||+.||-.|...+++++
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~  664 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARV  664 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccc
Confidence            678999999999999999999999999999999999999999999999999998877664

>KOG3623|consensus

Probab=99.53  E-value=2e-14  Score=148.95  Aligned_cols=84  Identities=35%  Similarity=0.784  Sum_probs=78.4

Q ss_pred             CCCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCCh
Q psy17740        257 NDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRS  336 (384)
Q Consensus       257 ~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~  336 (384)
                      .......|.|..  |.|.|...+.|.||.-.|+|.+||+|.+  |.|+|..+.+|..|+|.|.|||||+|..|+|+|...
T Consensus       888 ~kte~gmyaCDq--CDK~FqKqSSLaRHKYEHsGqRPyqC~i--CkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHS  963 (1007)
T KOG3623|consen  888 AKTEDGMYACDQ--CDKAFQKQSSLARHKYEHSGQRPYQCII--CKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHS  963 (1007)
T ss_pred             ccCccccchHHH--HHHHHHhhHHHHHhhhhhcCCCCcccch--hhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccc
Confidence            344557899965  9999999999999999999999999977  999999999999999999999999999999999999


Q ss_pred             HHHHHHHH
Q psy17740        337 DHLAKHVK  344 (384)
Q Consensus       337 s~L~~H~r  344 (384)
                      ..+.+||.
T Consensus       964 GSYSQHMN  971 (1007)
T KOG3623|consen  964 GSYSQHMN  971 (1007)
T ss_pred             cchHhhhc
Confidence            99999986

>KOG3623|consensus

Probab=99.42  E-value=4.5e-14  Score=146.40  Aligned_cols=108  Identities=29%  Similarity=0.560  Sum_probs=59.5

Q ss_pred             cCCCCCCCccccchhhhhccCCCCCCCCCCceeecccCCCCCcccChhhHHHHHHhhcC-------------CCcccccc
Q psy17740        232 FAQPPRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTG-------------ERPFLCQW  298 (384)
Q Consensus       232 ~~qcp~c~k~~~t~~~lk~h~~~~~~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~-------------ekp~~C~~  298 (384)
                      ..+||+|.+.+.....++.|.+..+.. .+..|.|..  |..+|.....|.+||..|..             .+.|+|  
T Consensus       210 lltcpycdrgykrltslkeHikyrhek-ne~nfsC~l--CsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKC--  284 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEK-NEPNFSCML--CSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKC--  284 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhh-CCCCCcchh--hhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccc--
Confidence            345666666665555555555443332 223455643  66666666666666655531             234555  


Q ss_pred             CCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHH
Q psy17740        299 TGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVK  344 (384)
Q Consensus       299 ~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r  344 (384)
                      .+|||+|..+.+|+.|+|+|.|||||.|+.|+|+|.....+..||.
T Consensus       285 tECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  285 TECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             cccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            4466666666666666666666666666666666665555555553

>KOG1074|consensus

Probab=99.41  E-value=8.8e-14  Score=146.43  Aligned_cols=80  Identities=26%  Similarity=0.393  Sum_probs=69.0

Q ss_pred             cccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCC----CCCCCC---CCCCCccchhh
Q psy17740        294 FLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKD----GAITPS---NIGTPSNVLRN  366 (384)
Q Consensus       294 ~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e----~~~~c~---~Cg~~~~~~~~  366 (384)
                      .+|.+  |.+....+..|+.|.|+|+|||||+|.+|||+|.++.+|+.||-+|...    ..|.|.   +|-+.|.....
T Consensus       606 NqCii--C~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~  683 (958)
T KOG1074|consen  606 NQCII--CLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVT  683 (958)
T ss_pred             cceee--eeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccc
Confidence            37876  9999999999999999999999999999999999999999999999755    466788   88888887776


Q ss_pred             HHHHHHHHh
Q psy17740        367 ANVAFNMMV  375 (384)
Q Consensus       367 ~~~hl~~~~  375 (384)
                      +-.|+.+|.
T Consensus       684 lpQhIriH~  692 (958)
T KOG1074|consen  684 LPQHIRIHL  692 (958)
T ss_pred             ccceEEeec
Confidence            666665543

>KOG3608|consensus

Probab=99.39  E-value=1.5e-13  Score=132.86  Aligned_cols=136  Identities=20%  Similarity=0.395  Sum_probs=80.7

Q ss_pred             CCCCccccchhhhhccCCCCCCCCCCceeecccCCCCCcccChhhHHHHHHhhc--CCCccccccCCCCCccCChHHHHH
Q psy17740        236 PRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHT--GERPFLCQWTGCGRRFSRSDELSR  313 (384)
Q Consensus       236 p~c~k~~~t~~~lk~h~~~~~~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~--~ekp~~C~~~~Cgk~F~~~~~L~~  313 (384)
                      ..|.+.+.....|..|.+.+..   +|...|..  ||..|..+..|..|++..+  ...+|.|..  |.|.|+....|+.
T Consensus       183 ~~Ct~~~~~k~~LreH~r~Hs~---eKvvACp~--Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~--C~KrFaTeklL~~  255 (467)
T KOG3608|consen  183 AMCTKHMGNKYRLREHIRTHSN---EKVVACPH--CGELFRTKTKLFDHLRRQTELNTNSFQCAQ--CFKRFATEKLLKS  255 (467)
T ss_pred             hhhhhhhccHHHHHHHHHhcCC---CeEEecch--HHHHhccccHHHHHHHhhhhhcCCchHHHH--HHHHHhHHHHHHH
Confidence            3455566666666666654443   35666644  6666666666666665433  234566633  6666666666666


Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHH-HhcCCCCCCCCCCCCCccchhhHHHHHHHHhhcCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVK-RHSKDGAITPSNIGTPSNVLRNANVAFNMMVTNLPHP  381 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r-~H~~e~~~~c~~Cg~~~~~~~~~~~hl~~~~~~l~~~  381 (384)
                      |++.|.  .-|+|+.|.......+.|.+||+ .|..+++|+|..|++.|....+|++|+..|.. +.|.
T Consensus       256 Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~-~~y~  321 (467)
T KOG3608|consen  256 HVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSK-TVYQ  321 (467)
T ss_pred             HHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhccc-ccee
Confidence            666663  34666666666666666666655 35566666666666666666666666665552 4443

>KOG3576|consensus

Probab=99.39  E-value=4.5e-13  Score=121.18  Aligned_cols=109  Identities=27%  Similarity=0.467  Sum_probs=96.9

Q ss_pred             CCCCCCccccchhhhhccCCCCCCCCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHH
Q psy17740        234 QPPRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSR  313 (384)
Q Consensus       234 qcp~c~k~~~t~~~lk~h~~~~~~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~  313 (384)
                      .|..|++.|.-...+.+|.+.+...   +.|.|.+  |||.|....+|++|+|+|+|.+||+|..  |+|+|...-.|..
T Consensus       119 tCrvCgK~F~lQRmlnrh~kch~~v---kr~lct~--cgkgfndtfdlkrh~rthtgvrpykc~~--c~kaftqrcsles  191 (267)
T KOG3576|consen  119 TCRVCGKKFGLQRMLNRHLKCHSDV---KRHLCTF--CGKGFNDTFDLKRHTRTHTGVRPYKCSL--CEKAFTQRCSLES  191 (267)
T ss_pred             eeehhhhhhhHHHHHHHHhhhccHH---HHHHHhh--ccCcccchhhhhhhhccccCccccchhh--hhHHHHhhccHHH
Confidence            6999999999999999998876654   7799988  9999999999999999999999999955  9999999999999


Q ss_pred             HHhhhcC-----------CCccccCccCcccCChHHHHHHHHHhcCC
Q psy17740        314 HKRTHTG-----------EKKFGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       314 H~r~Htg-----------ekpf~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      |.+.-+|           +|-|.|+.||..-.+...+..|++.|+..
T Consensus       192 hl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  192 HLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             HHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence            9764333           46799999999999999999999998643

>KOG3608|consensus

Probab=99.36  E-value=3.8e-13  Score=130.12  Aligned_cols=145  Identities=23%  Similarity=0.348  Sum_probs=126.6

Q ss_pred             ccCCCCCCCccccchhhhhccCCCCCCCCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHH
Q psy17740        231 FFAQPPRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDE  310 (384)
Q Consensus       231 ~~~qcp~c~k~~~t~~~lk~h~~~~~~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~  310 (384)
                      -...||.|+.-|.+..++-.|.+...... ...|.|..  |.|.|.....|+.|++.|-.-  |+|+.  |+.+....+.
T Consensus       206 KvvACp~Cg~~F~~~tkl~DH~rRqt~l~-~n~fqC~~--C~KrFaTeklL~~Hv~rHvn~--ykCpl--Cdmtc~~~ss  278 (467)
T KOG3608|consen  206 KVVACPHCGELFRTKTKLFDHLRRQTELN-TNSFQCAQ--CFKRFATEKLLKSHVVRHVNC--YKCPL--CDMTCSSASS  278 (467)
T ss_pred             eEEecchHHHHhccccHHHHHHHhhhhhc-CCchHHHH--HHHHHhHHHHHHHHHHHhhhc--ccccc--cccCCCChHH
Confidence            44579999999999999999987766543 34899966  999999999999999998755  89977  9999999999


Q ss_pred             HHHHHh-hhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCC--CCCCccchhhHHHHHHHHhh---cCCCCCC
Q psy17740        311 LSRHKR-THTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSN--IGTPSNVLRNANVAFNMMVT---NLPHPVP  383 (384)
Q Consensus       311 L~~H~r-~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~--Cg~~~~~~~~~~~hl~~~~~---~l~~~~p  383 (384)
                      |.+|++ .|...|||+|..|.+.|.+.+.|.+|...|. +..|.|..  |...+.....+++||..+.+   ...|.|+
T Consensus       279 L~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH  356 (467)
T KOG3608|consen  279 LTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACH  356 (467)
T ss_pred             HHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeee
Confidence            999988 5888999999999999999999999999888 78999998  99999999999999988774   2455554

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.90  E-value=3.4e-09  Score=110.67  Aligned_cols=102  Identities=16%  Similarity=0.437  Sum_probs=84.2

Q ss_pred             ceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccC-------
Q psy17740        262 RIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFM-------  334 (384)
Q Consensus       262 k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~-------  334 (384)
                      +.+.|.+  |++.|. ...|..|++.|+  +++.|  + ||+.| .+..|..|++.|..++++.|.+|++.|.       
T Consensus       452 ~H~~C~~--Cgk~f~-~s~LekH~~~~H--kpv~C--p-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d  522 (567)
T PLN03086        452 NHVHCEK--CGQAFQ-QGEMEKHMKVFH--EPLQC--P-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMD  522 (567)
T ss_pred             cCccCCC--CCCccc-hHHHHHHHHhcC--CCccC--C-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccc
Confidence            4467855  999996 688999999985  78999  5 99765 5689999999999999999999999995       


Q ss_pred             ---ChHHHHHHHHHhcCCCCCCCCCCCCCccchhhHHHHHHHH
Q psy17740        335 ---RSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVAFNMM  374 (384)
Q Consensus       335 ---~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~~~hl~~~  374 (384)
                         ....|..|+..+ |.+.+.|..||+.+ ..+++..|+...
T Consensus       523 ~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~V-rlrdm~~H~~~~  563 (567)
T PLN03086        523 VRDRLRGMSEHESIC-GSRTAPCDSCGRSV-MLKEMDIHQIAV  563 (567)
T ss_pred             hhhhhhhHHHHHHhc-CCcceEccccCCee-eehhHHHHHHHh
Confidence               245899999985 88999999999874 456667776543

>PHA00733 hypothetical protein

Probab=98.79  E-value=4.7e-09  Score=90.42  Aligned_cols=85  Identities=22%  Similarity=0.430  Sum_probs=67.5

Q ss_pred             CCCCceeecccCCCCCcccChhhHHHH--HH---hhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcc
Q psy17740        258 DPRRRIFECNYENCGKNYFKSSHLKAH--MR---THTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRR  332 (384)
Q Consensus       258 ~~~~k~f~C~~e~Cgk~F~~~s~L~~H--~r---~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~  332 (384)
                      .+..+.+.|.+  |.+.|.....|..|  ++   .+.+.++|.|..  |++.|.....|..|++.|  +.+|.|..|++.
T Consensus        35 ~~~~~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~--Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~  108 (128)
T PHA00733         35 TPEQKRLIRAV--VKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPL--CLMPFSSSVSLKQHIRYT--EHSKVCPVCGKE  108 (128)
T ss_pred             ChhhhhHHHHH--HhhhccChhhhcchHHHHhhcccCCCCCccCCC--CCCcCCCHHHHHHHHhcC--CcCccCCCCCCc
Confidence            45567888966  98888877666655  22   234578999954  999999999999999877  457999999999


Q ss_pred             cCChHHHHHHHHHhcC
Q psy17740        333 FMRSDHLAKHVKRHSK  348 (384)
Q Consensus       333 F~~~s~L~~H~r~H~~  348 (384)
                      |.....|.+|+...|+
T Consensus       109 F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        109 FRNTDSTLDHVCKKHN  124 (128)
T ss_pred             cCCHHHHHHHHHHhcC
Confidence            9999999999987765

>PHA00733 hypothetical protein

Probab=98.70  E-value=1.6e-08  Score=87.15  Aligned_cols=92  Identities=12%  Similarity=0.098  Sum_probs=71.9

Q ss_pred             hhHHHHHHhhcCCCccccccCCCCCccCChHHHHHH--Hh---hhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCC
Q psy17740        279 SHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRH--KR---THTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAIT  353 (384)
Q Consensus       279 s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H--~r---~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~  353 (384)
                      ..|.++-..-...+++.|.+  |.+.|.....|..|  ++   .+.+.++|.|+.|++.|.....|..|++.|  +..|.
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~  101 (128)
T PHA00733         26 EELKRYHSLTPEQKRLIRAV--VKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKV  101 (128)
T ss_pred             HHhhhhhcCChhhhhHHHHH--HhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCcc
Confidence            33443333333467899976  99988887777666  22   334588999999999999999999999987  45799


Q ss_pred             CCCCCCCccchhhHHHHHHHH
Q psy17740        354 PSNIGTPSNVLRNANVAFNMM  374 (384)
Q Consensus       354 c~~Cg~~~~~~~~~~~hl~~~  374 (384)
                      |..|++.|.....|..|+..+
T Consensus       102 C~~CgK~F~~~~sL~~H~~~~  122 (128)
T PHA00733        102 CPVCGKEFRNTDSTLDHVCKK  122 (128)
T ss_pred             CCCCCCccCCHHHHHHHHHHh
Confidence            999999999999999987654

>PHA02768 hypothetical protein; Provisional

Probab=98.59  E-value=2.6e-08  Score=72.68  Aligned_cols=42  Identities=24%  Similarity=0.546  Sum_probs=22.8

Q ss_pred             cccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHH
Q psy17740        294 FLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHL  339 (384)
Q Consensus       294 ~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L  339 (384)
                      |.|+  .||+.|.+..+|..|+++|+  ++|+|..|++.|.+.+.|
T Consensus         6 y~C~--~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECP--ICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcc--hhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            4553  25555555555555555555  455555555555554443

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.52  E-value=1.2e-07  Score=99.32  Aligned_cols=100  Identities=18%  Similarity=0.373  Sum_probs=81.5

Q ss_pred             CCCCCCccccchhhhhccCCCCCCCCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCC------
Q psy17740        234 QPPRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSR------  307 (384)
Q Consensus       234 qcp~c~k~~~t~~~lk~h~~~~~~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~------  307 (384)
                      .|+.|++.|. ...+..|...++     +++.|  + ||+.+ ....|..|++.|...+++.|.+  |++.|..      
T Consensus       455 ~C~~Cgk~f~-~s~LekH~~~~H-----kpv~C--p-Cg~~~-~R~~L~~H~~thCp~Kpi~C~f--C~~~v~~g~~~~d  522 (567)
T PLN03086        455 HCEKCGQAFQ-QGEMEKHMKVFH-----EPLQC--P-CGVVL-EKEQMVQHQASTCPLRLITCRF--CGDMVQAGGSAMD  522 (567)
T ss_pred             cCCCCCCccc-hHHHHHHHHhcC-----CCccC--C-CCCCc-chhHHHhhhhccCCCCceeCCC--CCCccccCccccc
Confidence            5788888885 566788877653     57899  4 99765 6689999999999999999987  9999952      


Q ss_pred             ----hHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhc
Q psy17740        308 ----SDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS  347 (384)
Q Consensus       308 ----~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~  347 (384)
                          ...|..|+..+ |.+++.|..||+.|..+ .|..|+-..|
T Consensus       523 ~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~~h  564 (567)
T PLN03086        523 VRDRLRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIAVH  564 (567)
T ss_pred             hhhhhhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHHhh
Confidence                35899998886 89999999999999886 6777876533

>PHA02768 hypothetical protein; Provisional

Probab=98.49  E-value=5.6e-08  Score=70.97  Aligned_cols=40  Identities=20%  Similarity=0.483  Sum_probs=25.1

Q ss_pred             cccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchh
Q psy17740        324 FGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLR  365 (384)
Q Consensus       324 f~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~  365 (384)
                      |.|++||+.|.+.++|..|+++|+  ++|+|..|++.|....
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s   45 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTG   45 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccc
Confidence            566666666666666666666665  4666666666655433

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.43  E-value=1.1e-07  Score=59.14  Aligned_cols=25  Identities=52%  Similarity=1.035  Sum_probs=18.5

Q ss_pred             HHHHHHhhhcCCCccccCccCcccC
Q psy17740        310 ELSRHKRTHTGEKKFGCSICNRRFM  334 (384)
Q Consensus       310 ~L~~H~r~Htgekpf~C~~C~k~F~  334 (384)
                      +|.+|++.|+|++||.|++|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4677777777777777777777775

...

>KOG3993|consensus

Probab=98.08  E-value=7.5e-07  Score=88.73  Aligned_cols=82  Identities=27%  Similarity=0.555  Sum_probs=61.4

Q ss_pred             eeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcC----------------------
Q psy17740        263 IFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTG----------------------  320 (384)
Q Consensus       263 ~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htg----------------------  320 (384)
                      -|.|..  |...|.....|.+|....--..-|+|  ++|+|.|.-..+|..|.|-|.-                      
T Consensus       267 dyiCqL--CK~kYeD~F~LAQHrC~RIV~vEYrC--PEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~  342 (500)
T KOG3993|consen  267 DYICQL--CKEKYEDAFALAQHRCPRIVHVEYRC--PECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEV  342 (500)
T ss_pred             HHHHHH--HHHhhhhHHHHhhccCCeeEEeeecC--CcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhh
Confidence            478876  88888888888888754433344888  6688888888888888887731                      


Q ss_pred             -----------CCccccCccCcccCChHHHHHHHHHhcC
Q psy17740        321 -----------EKKFGCSICNRRFMRSDHLAKHVKRHSK  348 (384)
Q Consensus       321 -----------ekpf~C~~C~k~F~~~s~L~~H~r~H~~  348 (384)
                                 +.-|.|.+|+|.|.+...|+.|+.+|+.
T Consensus       343 ~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  343 QEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             hhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence                       1247888888888888888888777764

>PHA00616 hypothetical protein

Probab=98.05  E-value=1.9e-06  Score=60.04  Aligned_cols=33  Identities=18%  Similarity=0.405  Sum_probs=21.8

Q ss_pred             ccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      ||+|..||+.|..++.|..|++.|||++++.|.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            466666666666666666666666666666553

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.99  E-value=3.3e-06  Score=52.48  Aligned_cols=26  Identities=58%  Similarity=1.310  Sum_probs=23.3

Q ss_pred             hHHHHHHhhcCCCccccccCCCCCccCC
Q psy17740        280 HLKAHMRTHTGERPFLCQWTGCGRRFSR  307 (384)
Q Consensus       280 ~L~~H~r~H~~ekp~~C~~~~Cgk~F~~  307 (384)
                      +|.+||++|+++++|.|+.  |++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~--C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPY--CGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESS--SSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCC--CcCeeCc
Confidence            5899999999999999965  9999964

...

>KOG3993|consensus

Probab=97.80  E-value=4.6e-06  Score=83.21  Aligned_cols=82  Identities=17%  Similarity=0.351  Sum_probs=69.4

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhc-------------------------
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS-------------------------  347 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~-------------------------  347 (384)
                      .|.|.+  |.-.|.....|.+|.-.-....-|+|++|+|.|.-..+|..|.|-|.                         
T Consensus       267 dyiCqL--CK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~e  344 (500)
T KOG3993|consen  267 DYICQL--CKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQE  344 (500)
T ss_pred             HHHHHH--HHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhh
Confidence            399987  99999999999999664444456999999999999999999998763                         


Q ss_pred             --------CCCCCCCCCCCCCccchhhHHHHHHHHhh
Q psy17740        348 --------KDGAITPSNIGTPSNVLRNANVAFNMMVT  376 (384)
Q Consensus       348 --------~e~~~~c~~Cg~~~~~~~~~~~hl~~~~~  376 (384)
                              .+..|.|..|+|.|.+...|++|.-.|+.
T Consensus       345 a~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  345 AERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             ccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence                    12468999999999999999999666655

>PHA00732 hypothetical protein

Probab=97.74  E-value=2e-05  Score=62.26  Aligned_cols=38  Identities=32%  Similarity=0.590  Sum_probs=18.4

Q ss_pred             CCCccCChHHHHHHHhh-hcCCCccccCccCcccCChHHHHHHHH
Q psy17740        301 CGRRFSRSDELSRHKRT-HTGEKKFGCSICNRRFMRSDHLAKHVK  344 (384)
Q Consensus       301 Cgk~F~~~~~L~~H~r~-Htgekpf~C~~C~k~F~~~s~L~~H~r  344 (384)
                      |++.|.+...|.+|++. |.+   +.|+.|++.|.   .|..|++
T Consensus         7 Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~   45 (79)
T PHA00732          7 CGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFY   45 (79)
T ss_pred             CCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---Chhhhhc
Confidence            55555555555555542 332   34555555554   2444543

>PHA00732 hypothetical protein

Probab=97.70  E-value=2.8e-05  Score=61.48  Aligned_cols=44  Identities=23%  Similarity=0.332  Sum_probs=37.3

Q ss_pred             ccccCccCcccCChHHHHHHHHH-hcCCCCCCCCCCCCCccchhhHHHHHH
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVKR-HSKDGAITPSNIGTPSNVLRNANVAFN  372 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r~-H~~e~~~~c~~Cg~~~~~~~~~~~hl~  372 (384)
                      ||.|..|++.|.+...|..|++. |.+   +.|..||+.|.   .++.|+.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~   45 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFY   45 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---Chhhhhc
Confidence            68999999999999999999985 553   57999999987   5677763

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.59  E-value=2.7e-05  Score=75.33  Aligned_cols=54  Identities=26%  Similarity=0.733  Sum_probs=38.1

Q ss_pred             CCccccccCCCCCccCChHHHHHHHhh-h------------------cCCCccccCccCcccCChHHHHHHHH
Q psy17740        291 ERPFLCQWTGCGRRFSRSDELSRHKRT-H------------------TGEKKFGCSICNRRFMRSDHLAKHVK  344 (384)
Q Consensus       291 ekp~~C~~~~Cgk~F~~~~~L~~H~r~-H------------------tgekpf~C~~C~k~F~~~s~L~~H~r  344 (384)
                      +|||+|++.+|.|.+.....|+.|+.- |                  ...|||+|++|+|+|+....|+.|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            466666666666666666666666542 2                  12489999999999999999998865

>PHA00616 hypothetical protein

Probab=97.57  E-value=2.9e-05  Score=54.17  Aligned_cols=33  Identities=21%  Similarity=0.462  Sum_probs=18.0

Q ss_pred             cccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        294 FLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       294 ~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      |+|.  .||+.|..+..|.+|++.|+|+++|.|+.
T Consensus         2 YqC~--~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          2 YQCL--RCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             Cccc--hhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            5552  35555555555555555555555555543

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.53  E-value=5.3e-05  Score=45.23  Aligned_cols=23  Identities=35%  Similarity=0.996  Sum_probs=18.7

Q ss_pred             cccCccCcccCChHHHHHHHHHh
Q psy17740        324 FGCSICNRRFMRSDHLAKHVKRH  346 (384)
Q Consensus       324 f~C~~C~k~F~~~s~L~~H~r~H  346 (384)
                      |.|+.|++.|.++..|.+|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            67888888888888888888775

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.49  E-value=0.00016  Score=52.74  Aligned_cols=50  Identities=32%  Similarity=0.750  Sum_probs=32.4

Q ss_pred             cccccCCCCCccCChHHHHHHHh-hhcCC-CccccCccCcccCChHHHHHHHHHhcC
Q psy17740        294 FLCQWTGCGRRFSRSDELSRHKR-THTGE-KKFGCSICNRRFMRSDHLAKHVKRHSK  348 (384)
Q Consensus       294 ~~C~~~~Cgk~F~~~~~L~~H~r-~Htge-kpf~C~~C~k~F~~~s~L~~H~r~H~~  348 (384)
                      |.|++  |++. .....|..|.. .|..+ +.+.|++|...+.  .+|.+|+..+|+
T Consensus         3 f~CP~--C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    3 FTCPY--CGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             cCCCC--CCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            67766  7774 44567777744 45543 4577888877544  377778776653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.22  E-value=0.00025  Score=42.06  Aligned_cols=24  Identities=33%  Similarity=0.877  Sum_probs=17.6

Q ss_pred             cccCccCcccCChHHHHHHHHHhc
Q psy17740        324 FGCSICNRRFMRSDHLAKHVKRHS  347 (384)
Q Consensus       324 f~C~~C~k~F~~~s~L~~H~r~H~  347 (384)
                      |.|++|++.|.+...|..|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            678888888888888888888764

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.85  E-value=0.00044  Score=42.85  Aligned_cols=26  Identities=27%  Similarity=0.640  Sum_probs=20.5

Q ss_pred             ccccCccCcccCChHHHHHHHHHhcC
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVKRHSK  348 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r~H~~  348 (384)
                      +|.|..|++.|.....|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            57888888888888888888877653

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.83  E-value=0.00073  Score=54.25  Aligned_cols=73  Identities=21%  Similarity=0.485  Sum_probs=21.9

Q ss_pred             ecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHH
Q psy17740        265 ECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVK  344 (384)
Q Consensus       265 ~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r  344 (384)
                      +|.+  |+..|.....|..||...++...-      ....+.....+..+.+.-. ...+.|..|++.|.....|..||+
T Consensus         1 ~C~~--C~~~f~~~~~l~~H~~~~H~~~~~------~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~   71 (100)
T PF12756_consen    1 QCLF--CDESFSSVDDLLQHMKKKHGFDIP------DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMR   71 (100)
T ss_dssp             ---------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHH
T ss_pred             Cccc--cccccccccccccccccccccccc------ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHc
Confidence            4755  999999999999999875543211      1122223344444443222 236999999999999999999999


Q ss_pred             Hh
Q psy17740        345 RH  346 (384)
Q Consensus       345 ~H  346 (384)
                      .+
T Consensus        72 ~~   73 (100)
T PF12756_consen   72 SK   73 (100)
T ss_dssp             HT
T ss_pred             Cc
Confidence            75

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.73  E-value=0.0021  Score=46.81  Aligned_cols=50  Identities=38%  Similarity=0.786  Sum_probs=38.9

Q ss_pred             eeecccCCCCCcccChhhHHHHHHh-hcCC-CccccccCCCCCccCChHHHHHHHhhhc
Q psy17740        263 IFECNYENCGKNYFKSSHLKAHMRT-HTGE-RPFLCQWTGCGRRFSRSDELSRHKRTHT  319 (384)
Q Consensus       263 ~f~C~~e~Cgk~F~~~s~L~~H~r~-H~~e-kp~~C~~~~Cgk~F~~~~~L~~H~r~Ht  319 (384)
                      .|.|++  |++ ..+...|..|... |..+ +.+.|++  |...+.  .+|.+|+..++
T Consensus         2 ~f~CP~--C~~-~~~~~~L~~H~~~~H~~~~~~v~CPi--C~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPY--CGK-GFSESSLVEHCEDEHRSESKNVVCPI--CSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCC--CCC-ccCHHHHHHHHHhHCcCCCCCccCCC--chhhhh--hHHHHHHHHhc
Confidence            488977  999 5667899999876 6554 5699977  998655  49999988765

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.50  E-value=0.002  Score=38.28  Aligned_cols=23  Identities=48%  Similarity=1.008  Sum_probs=12.9

Q ss_pred             eecccCCCCCcccChhhHHHHHHhh
Q psy17740        264 FECNYENCGKNYFKSSHLKAHMRTH  288 (384)
Q Consensus       264 f~C~~e~Cgk~F~~~s~L~~H~r~H  288 (384)
                      |.|.  .|++.|.....|.+|++.|
T Consensus         1 y~C~--~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCP--ICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEET--TTTEEESSHHHHHHHHHHH
T ss_pred             CCCC--CCCCccCCHHHHHHHHhHC
Confidence            4553  3666666666666666543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>smart00355 ZnF_C2H2 zinc finger

Probab=96.38  E-value=0.0034  Score=37.47  Aligned_cols=24  Identities=25%  Similarity=0.731  Sum_probs=18.6

Q ss_pred             cccCccCcccCChHHHHHHHHHhc
Q psy17740        324 FGCSICNRRFMRSDHLAKHVKRHS  347 (384)
Q Consensus       324 f~C~~C~k~F~~~s~L~~H~r~H~  347 (384)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            568888888888888888887664

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.31  E-value=0.00077  Score=65.48  Aligned_cols=52  Identities=19%  Similarity=0.368  Sum_probs=42.8

Q ss_pred             CCccccCc--cCcccCChHHHHHHHHH-h------------------cCCCCCCCCCCCCCccchhhHHHHHH
Q psy17740        321 EKKFGCSI--CNRRFMRSDHLAKHVKR-H------------------SKDGAITPSNIGTPSNVLRNANVAFN  372 (384)
Q Consensus       321 ekpf~C~~--C~k~F~~~s~L~~H~r~-H------------------~~e~~~~c~~Cg~~~~~~~~~~~hl~  372 (384)
                      +|||+|++  |.|.|.....|+.|+.- |                  ..+++|.|..|+|.++.+.-|+=|..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            59999987  99999999999999864 3                  12489999999999988777665543

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.11  E-value=0.0035  Score=45.00  Aligned_cols=33  Identities=21%  Similarity=0.406  Sum_probs=21.8

Q ss_pred             cCCCccccCccCcccCChHHHHHHHHHhcCCCC
Q psy17740        319 TGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGA  351 (384)
Q Consensus       319 tgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~  351 (384)
                      ..+.|-.|++|+..+.+..+|++|+.++|+.++
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            346778888888888888888888888877664

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.87  E-value=0.011  Score=58.71  Aligned_cols=113  Identities=28%  Similarity=0.465  Sum_probs=69.0

Q ss_pred             eeecccCCCCCcccChhhHHHHHH--hhcCC--CccccccCCCCCccCChHHHHHHHhhhcCCCccccCc----------
Q psy17740        263 IFECNYENCGKNYFKSSHLKAHMR--THTGE--RPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI----------  328 (384)
Q Consensus       263 ~f~C~~e~Cgk~F~~~s~L~~H~r--~H~~e--kp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~----------  328 (384)
                      .+.|  ..|...|.....|.+|.+  .|.++  +++.|++..|++.|.+...+.+|...|++.+++.|..          
T Consensus       289 ~~~~--~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (467)
T COG5048         289 PIKS--KQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPL  366 (467)
T ss_pred             CCCC--ccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccc
Confidence            4555  347777777777777777  67777  7777763347777777777777777776544333321          


Q ss_pred             ---------------------------cCcccCChHHHHHHHHHhcCCC--CCCCCCCCCCccchhhHHHHHHHHhhc
Q psy17740        329 ---------------------------CNRRFMRSDHLAKHVKRHSKDG--AITPSNIGTPSNVLRNANVAFNMMVTN  377 (384)
Q Consensus       329 ---------------------------C~k~F~~~s~L~~H~r~H~~e~--~~~c~~Cg~~~~~~~~~~~hl~~~~~~  377 (384)
                                                 |...+.+...+..|...|....  .+.+..|.+.+....++..|...+..+
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  444 (467)
T COG5048         367 LNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNH  444 (467)
T ss_pred             cCCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccC
Confidence                                       3344444444555544444433  555666666666666666666665554

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=95.72  E-value=0.0095  Score=35.02  Aligned_cols=18  Identities=56%  Similarity=1.053  Sum_probs=9.6

Q ss_pred             CCCcccChhhHHHHHHhh
Q psy17740        271 CGKNYFKSSHLKAHMRTH  288 (384)
Q Consensus       271 Cgk~F~~~s~L~~H~r~H  288 (384)
                      |++.|.....|..|++.|
T Consensus         6 C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    6 CGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             TS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCcHHHHHHHHHhh
Confidence            555555555555555544

...

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.48  E-value=0.011  Score=35.53  Aligned_cols=24  Identities=29%  Similarity=0.688  Sum_probs=17.1

Q ss_pred             cccCccCcccCChHHHHHHHHHhcC
Q psy17740        324 FGCSICNRRFMRSDHLAKHVKRHSK  348 (384)
Q Consensus       324 f~C~~C~k~F~~~s~L~~H~r~H~~  348 (384)
                      |+|+.|+.... ...|.+|++.|++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            67888887777 7788888887763

>PRK04860 hypothetical protein; Provisional

Probab=95.27  E-value=0.0095  Score=53.35  Aligned_cols=39  Identities=10%  Similarity=0.232  Sum_probs=29.8

Q ss_pred             ccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchh
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLR  365 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~  365 (384)
                      +|.|. |++   ....+++|.++|+++++|.|..|+..+....
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            57887 876   5667788888888888888888888766543

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=94.93  E-value=0.016  Score=35.73  Aligned_cols=24  Identities=46%  Similarity=0.945  Sum_probs=13.7

Q ss_pred             eecccCCCCCcccChhhHHHHHHhhc
Q psy17740        264 FECNYENCGKNYFKSSHLKAHMRTHT  289 (384)
Q Consensus       264 f~C~~e~Cgk~F~~~s~L~~H~r~H~  289 (384)
                      |.|..  |++.|.....|..|++.|.
T Consensus         2 ~~C~~--C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    2 FECDE--CGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             EEETT--TTEEESSHHHHHHHHCTTT
T ss_pred             CCCCc--cCCccCChhHHHHHhHHhc
Confidence            55533  6666666666666665553

>PRK04860 hypothetical protein; Provisional

Probab=94.75  E-value=0.019  Score=51.36  Aligned_cols=38  Identities=26%  Similarity=0.693  Sum_probs=27.7

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCCh
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRS  336 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~  336 (384)
                      +|.|  . |++   ....+.+|.++|+|+++|.|..|+..|...
T Consensus       119 ~Y~C--~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRC--K-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEc--C-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            4777  3 776   566777888888888888888888777543

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=94.41  E-value=0.019  Score=34.61  Aligned_cols=23  Identities=35%  Similarity=0.872  Sum_probs=17.8

Q ss_pred             cccCccCcccCChHHHHHHHHHh
Q psy17740        324 FGCSICNRRFMRSDHLAKHVKRH  346 (384)
Q Consensus       324 f~C~~C~k~F~~~s~L~~H~r~H  346 (384)
                      |.|..|++.|.....|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            56888888888888888887643

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.08  E-value=0.14  Score=50.79  Aligned_cols=128  Identities=24%  Similarity=0.356  Sum_probs=93.7

Q ss_pred             cCCCCCCCccccchhhhhccCCCCCCCCCC--ceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCC-------
Q psy17740        232 FAQPPRENKEIVTSNKIKKSNKPATNDPRR--RIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCG-------  302 (384)
Q Consensus       232 ~~qcp~c~k~~~t~~~lk~h~~~~~~~~~~--k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cg-------  302 (384)
                      ...|..|...|.....+..|... ..+..+  +++.|.+..|++.|.+...+.+|...|.+..++.|.+..|.       
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~-~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRS-VNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             CCCCccccCCccccccccccccc-cccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            45788899999888888888874 233334  89999744699999999999999999988776666554333       


Q ss_pred             ----------------------------CccCChHHHHHHHhhhcCCC--ccccCccCcccCChHHHHHHHHHhcCCCCC
Q psy17740        303 ----------------------------RRFSRSDELSRHKRTHTGEK--KFGCSICNRRFMRSDHLAKHVKRHSKDGAI  352 (384)
Q Consensus       303 ----------------------------k~F~~~~~L~~H~r~Htgek--pf~C~~C~k~F~~~s~L~~H~r~H~~e~~~  352 (384)
                                                  ..+.+...+..|...|...+  .+.|..|.+.|.....+..|++.|.....+
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  447 (467)
T COG5048         368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPL  447 (467)
T ss_pred             CCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCce
Confidence                                        34444444444444454444  466788999999999999999999887777


Q ss_pred             CCCCCCCC
Q psy17740        353 TPSNIGTP  360 (384)
Q Consensus       353 ~c~~Cg~~  360 (384)
                      .|..++.-
T Consensus       448 ~~~~~~~~  455 (467)
T COG5048         448 LCSILKSF  455 (467)
T ss_pred             eecccccc
Confidence            66555443

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=94.04  E-value=0.037  Score=54.65  Aligned_cols=78  Identities=31%  Similarity=0.572  Sum_probs=39.1

Q ss_pred             eecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCC---Ccc------CChHHHHHHHhhhcCCCcc----ccCccC
Q psy17740        264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCG---RRF------SRSDELSRHKRTHTGEKKF----GCSICN  330 (384)
Q Consensus       264 f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cg---k~F------~~~~~L~~H~r~Htgekpf----~C~~C~  330 (384)
                      |.|....|..+......|+.|.+..++.  +.|..  |-   +.|      .++..|..|......+.-|    .|.+|.
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~--C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~  227 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSE--CIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCK  227 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHh--hhcCcccCccceeeeecccccccccCCccccCcCCCchhhhcc
Confidence            5666555666655566666666653332  33422  32   122      2334455554332222112    366666


Q ss_pred             cccCChHHHHHHHHH
Q psy17740        331 RRFMRSDHLAKHVKR  345 (384)
Q Consensus       331 k~F~~~s~L~~H~r~  345 (384)
                      ..|...+.|..|+|.
T Consensus       228 ~~FYdDDEL~~HcR~  242 (493)
T COG5236         228 IYFYDDDELRRHCRL  242 (493)
T ss_pred             ceecChHHHHHHHHh
Confidence            666666666666664

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=93.94  E-value=0.026  Score=45.05  Aligned_cols=74  Identities=12%  Similarity=0.227  Sum_probs=22.0

Q ss_pred             ccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchhhHHHHHHHH
Q psy17740        295 LCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVAFNMM  374 (384)
Q Consensus       295 ~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~~~hl~~~  374 (384)
                      +|.+  |+..|.....|..|+...++...   . ....+.....+..+++.-. ...+.|..|++.|.....+..||..+
T Consensus         1 ~C~~--C~~~f~~~~~l~~H~~~~H~~~~---~-~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLF--CDESFSSVDDLLQHMKKKHGFDI---P-DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccc--ccccccccccccccccccccccc---c-ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            4866  99999999999999876554321   1 1122224444545544322 13689999999999999999999875


Q ss_pred             h
Q psy17740        375 V  375 (384)
Q Consensus       375 ~  375 (384)
                      .
T Consensus        74 ~   74 (100)
T PF12756_consen   74 H   74 (100)
T ss_dssp             T
T ss_pred             c
Confidence            4

>KOG2231|consensus

Probab=93.45  E-value=0.1  Score=56.08  Aligned_cols=47  Identities=34%  Similarity=0.701  Sum_probs=29.3

Q ss_pred             ccccCCCCCccCChHHHHHHHhhhcCCCccccCccC------cccCChHHHHHHHHHhc
Q psy17740        295 LCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICN------RRFMRSDHLAKHVKRHS  347 (384)
Q Consensus       295 ~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~------k~F~~~s~L~~H~r~H~  347 (384)
                      .|.+  |...|.....|.+|++.++    |.|.+|.      .-|.....|..|-+.+|
T Consensus       184 ~C~~--C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  184 LCKF--CHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             cchh--hhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC
Confidence            4655  7777777777777776543    4555552      34555666777766554

>KOG2231|consensus

Probab=93.40  E-value=0.066  Score=57.57  Aligned_cols=98  Identities=22%  Similarity=0.334  Sum_probs=54.3

Q ss_pred             eecccCCCCCcccChhhHHHHHHh-hcCC---------CccccccCCCCCccCChHHHHHHHhhhc-CCCc----cccCc
Q psy17740        264 FECNYENCGKNYFKSSHLKAHMRT-HTGE---------RPFLCQWTGCGRRFSRSDELSRHKRTHT-GEKK----FGCSI  328 (384)
Q Consensus       264 f~C~~e~Cgk~F~~~s~L~~H~r~-H~~e---------kp~~C~~~~Cgk~F~~~~~L~~H~r~Ht-gekp----f~C~~  328 (384)
                      ..|.+  | ..|.....|+.|++. |-..         +-|.|    +.+. .....|.+|++.-. +++-    -.|.+
T Consensus       116 ~~~~~--c-~~~~s~~~Lk~H~~~~H~~~~c~lC~~~~kif~~----e~k~-Yt~~el~~h~~~gd~d~~s~rGhp~C~~  187 (669)
T KOG2231|consen  116 KECLH--C-TEFKSVENLKNHMRDQHKLHLCSLCLQNLKIFIN----ERKL-YTRAELNLHLMFGDPDDESCRGHPLCKF  187 (669)
T ss_pred             CCCcc--c-cchhHHHHHHHHHHHhhhhhccccccccceeeee----eeeh-ehHHHHHHHHhcCCCccccccCCccchh
Confidence            35644  7 677777788888753 4322         22322    3333 34566667755322 1221    34777


Q ss_pred             cCcccCChHHHHHHHHHhcCCCCCCCCCCC------CCccchhhHHHHHHH
Q psy17740        329 CNRRFMRSDHLAKHVKRHSKDGAITPSNIG------TPSNVLRNANVAFNM  373 (384)
Q Consensus       329 C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg------~~~~~~~~~~~hl~~  373 (384)
                      |...|.....|.+|++.+|.    .|..|+      --|+...+|+.|+..
T Consensus       188 C~~~fld~~el~rH~~~~h~----~chfC~~~~~~neyy~~~~dLe~HfR~  234 (669)
T KOG2231|consen  188 CHERFLDDDELYRHLRFDHE----FCHFCDYKTGQNEYYNDYDDLEEHFRK  234 (669)
T ss_pred             hhhhhccHHHHHHhhcccee----heeecCcccccchhcccchHHHHHhhh
Confidence            88888888888888776543    344443      233344555555543

>smart00355 ZnF_C2H2 zinc finger

Probab=92.97  E-value=0.092  Score=30.96  Aligned_cols=18  Identities=44%  Similarity=0.899  Sum_probs=9.9

Q ss_pred             CCCccCChHHHHHHHhhh
Q psy17740        301 CGRRFSRSDELSRHKRTH  318 (384)
Q Consensus       301 Cgk~F~~~~~L~~H~r~H  318 (384)
                      |++.|.....|..|++.|
T Consensus         6 C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        6 CGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CcchhCCHHHHHHHHHHh
Confidence            555555555555555544

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=92.56  E-value=0.032  Score=34.57  Aligned_cols=22  Identities=32%  Similarity=0.810  Sum_probs=16.6

Q ss_pred             cccCccCcccCChHHHHHHHHH
Q psy17740        324 FGCSICNRRFMRSDHLAKHVKR  345 (384)
Q Consensus       324 f~C~~C~k~F~~~s~L~~H~r~  345 (384)
                      |.|..|++.|.....|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6778888888888787777653

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=92.43  E-value=0.19  Score=36.22  Aligned_cols=31  Identities=23%  Similarity=0.478  Sum_probs=16.1

Q ss_pred             CceeecccCCCCCcccChhhHHHHHHhhcCCCc
Q psy17740        261 RRIFECNYENCGKNYFKSSHLKAHMRTHTGERP  293 (384)
Q Consensus       261 ~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp  293 (384)
                      ..+..|..  |+..+.+..+|++|+..+++.+|
T Consensus        22 ~~PatCP~--C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATCPI--CGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE-TT--T--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCCc--chhhccchhhHHHHHHHHhcccC
Confidence            45666733  77777777777777766665543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG4173|consensus

Probab=91.87  E-value=0.083  Score=48.74  Aligned_cols=83  Identities=27%  Similarity=0.553  Sum_probs=65.7

Q ss_pred             CCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhh-h---------cCCCccccC
Q psy17740        258 DPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRT-H---------TGEKKFGCS  327 (384)
Q Consensus       258 ~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~-H---------tgekpf~C~  327 (384)
                      ..+...|.|.+.+|.+.|....+...|..+-++   -.|.+  |.+.|.....|..|+.- |         -|...|+|-
T Consensus        74 ~~~~~~~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~--C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~Cl  148 (253)
T KOG4173|consen   74 KPRVPAFACQVAGCCQVFDALDDYEHHYHTLHG---NSCSF--CKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCL  148 (253)
T ss_pred             ccccccccccccchHHHHhhhhhHHHhhhhccc---chhHH--HHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHH
Confidence            344567899999999999988888888876444   37855  99999999999999753 3         245569994


Q ss_pred             --ccCcccCChHHHHHHHHH
Q psy17740        328 --ICNRRFMRSDHLAKHVKR  345 (384)
Q Consensus       328 --~C~k~F~~~s~L~~H~r~  345 (384)
                        .|+..|.+....++|+-.
T Consensus       149 vEgCt~KFkT~r~RkdH~I~  168 (253)
T KOG4173|consen  149 VEGCTEKFKTSRDRKDHMIR  168 (253)
T ss_pred             HHhhhhhhhhhhhhhhHHHH
Confidence              599999999999999754

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=91.67  E-value=0.15  Score=31.22  Aligned_cols=21  Identities=48%  Similarity=0.933  Sum_probs=15.0

Q ss_pred             cccCccCcccCChHHHHHHHHH
Q psy17740        324 FGCSICNRRFMRSDHLAKHVKR  345 (384)
Q Consensus       324 f~C~~C~k~F~~~s~L~~H~r~  345 (384)
                      ..|+.||+.| ..+.|.+|++.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4688888888 55677777654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=91.31  E-value=0.14  Score=30.81  Aligned_cols=22  Identities=32%  Similarity=0.880  Sum_probs=13.3

Q ss_pred             eecccCCCCCcccChhhHHHHHHh
Q psy17740        264 FECNYENCGKNYFKSSHLKAHMRT  287 (384)
Q Consensus       264 f~C~~e~Cgk~F~~~s~L~~H~r~  287 (384)
                      |.|.+  |++.|.....|..|++.
T Consensus         1 ~~C~~--C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDI--CNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETT--TTEEESSHHHHHHHHTT
T ss_pred             CCCCC--CCCCcCCHHHHHHHHCc
Confidence            45644  66666666666666654

>KOG4173|consensus

Probab=88.66  E-value=0.26  Score=45.52  Aligned_cols=81  Identities=23%  Similarity=0.395  Sum_probs=63.4

Q ss_pred             CccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHH----------hcCCCCCCC--CCCCC
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKR----------HSKDGAITP--SNIGT  359 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~----------H~~e~~~~c--~~Cg~  359 (384)
                      ..|.|.+.+|-..|...+++..|..+-+|.   .|.+|.+.|.+...|..|+.-          -.|..+|.|  ..|+-
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            458899999999999999999886554433   799999999999999999753          235678888  57888


Q ss_pred             CccchhhHHHHHHHHh
Q psy17740        360 PSNVLRNANVAFNMMV  375 (384)
Q Consensus       360 ~~~~~~~~~~hl~~~~  375 (384)
                      .|+..+.=+.|+-.+.
T Consensus       155 KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  155 KFKTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhhhHHHHhc
Confidence            8887777777765443

>KOG1146|consensus

Probab=87.79  E-value=1.2  Score=51.24  Aligned_cols=104  Identities=20%  Similarity=0.377  Sum_probs=63.4

Q ss_pred             ceeecccCCCCCcccChhhHHHHHHh-hcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHH
Q psy17740        262 RIFECNYENCGKNYFKSSHLKAHMRT-HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLA  340 (384)
Q Consensus       262 k~f~C~~e~Cgk~F~~~s~L~~H~r~-H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~  340 (384)
                      +.|.|..  |+..|+....|..|||. |....--.|.+      +...-.+.+-...-.+-++|.|..|...|....+|.
T Consensus       464 kt~~cpk--c~~~yk~a~~L~vhmRskhp~~~~~~c~~------gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Ls  535 (1406)
T KOG1146|consen  464 KTLKCPK--CNWHYKLAQTLGVHMRSKHPESQSAYCKA------GQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLS  535 (1406)
T ss_pred             ccccCCc--cchhhhhHHHhhhcccccccccchhHhHh------ccccccccccccccCCCCcccceeeeeeeecchHHH
Confidence            6677744  88888888888888876 33322222322      111111111011112346888999999999988998


Q ss_pred             HHHHH--hcCC-----------------------------------------CCCCCCCCCCCccchhhHHHHHHH
Q psy17740        341 KHVKR--HSKD-----------------------------------------GAITPSNIGTPSNVLRNANVAFNM  373 (384)
Q Consensus       341 ~H~r~--H~~e-----------------------------------------~~~~c~~Cg~~~~~~~~~~~hl~~  373 (384)
                      +||..  |..+                                         -.+.|..|++-.+..++++.|+..
T Consensus       536 ihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmts  611 (1406)
T KOG1146|consen  536 IHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTA  611 (1406)
T ss_pred             HHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhcccccccc
Confidence            88763  3211                                         134788888888888888888754

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=87.56  E-value=0.39  Score=28.61  Aligned_cols=17  Identities=35%  Similarity=0.640  Sum_probs=7.6

Q ss_pred             CCCccCChHHHHHHHhhh
Q psy17740        301 CGRRFSRSDELSRHKRTH  318 (384)
Q Consensus       301 Cgk~F~~~~~L~~H~r~H  318 (384)
                      |+.... ...|.+|++.|
T Consensus         6 C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    6 CSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             SS-EES-HHHHHHHHHHH
T ss_pred             CCCcCC-HHHHHHHHHhh
Confidence            544444 44455554443

>smart00451 ZnF_U1 U1-like zinc finger

Probab=87.15  E-value=0.41  Score=31.00  Aligned_cols=23  Identities=30%  Similarity=0.625  Sum_probs=19.7

Q ss_pred             ccccCccCcccCChHHHHHHHHH
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVKR  345 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r~  345 (384)
                      +|.|..|++.|.....+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999988899999763

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=85.56  E-value=0.22  Score=30.69  Aligned_cols=22  Identities=36%  Similarity=0.839  Sum_probs=12.8

Q ss_pred             eecccCCCCCcccChhhHHHHHHh
Q psy17740        264 FECNYENCGKNYFKSSHLKAHMRT  287 (384)
Q Consensus       264 f~C~~e~Cgk~F~~~s~L~~H~r~  287 (384)
                      |.|..  |++.|.....|..|+++
T Consensus         2 ~~C~~--C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDA--CDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTT--TTBBBSSHHHHHCCTTS
T ss_pred             CCccc--CCCCcCCHHHHHHHHcc
Confidence            45533  66666666666666554

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2893|consensus

Probab=83.94  E-value=0.32  Score=45.94  Aligned_cols=42  Identities=24%  Similarity=0.557  Sum_probs=26.9

Q ss_pred             CCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHH-Hhhh
Q psy17740        271 CGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRH-KRTH  318 (384)
Q Consensus       271 Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H-~r~H  318 (384)
                      |++.|-...-|.+|++..+    |+|.+  |.|...+--.|..| |.+|
T Consensus        16 cnrefddekiliqhqkakh----fkchi--chkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   16 CNREFDDEKILIQHQKAKH----FKCHI--CHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             cccccchhhhhhhhhhhcc----ceeee--ehhhhccCCCceeehhhhh
Confidence            7777777777777666533    67755  76666666666666 4455

>KOG2785|consensus

Probab=83.86  E-value=2.4  Score=42.77  Aligned_cols=53  Identities=11%  Similarity=0.090  Sum_probs=41.4

Q ss_pred             ccccCccCcccCChHHHHHHHHHhcCC-----------------------CCCCCCCCC---CCccchhhHHHHHHHHh
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVKRHSKD-----------------------GAITPSNIG---TPSNVLRNANVAFNMMV  375 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r~H~~e-----------------------~~~~c~~Cg---~~~~~~~~~~~hl~~~~  375 (384)
                      |-.|-+|++.|..-..-..||..|||=                       .-|.|-.|.   +.|..+...++||..-.
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~K~  244 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRDKG  244 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhhcc
Confidence            577999999999988888999988762                       244566666   88888888888887543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	384
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		2e-30
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-29
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-29
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-22
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		2e-20
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		5e-09
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		1e-17
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		3e-17
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		3e-17
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-17
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		5e-17
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		7e-17
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		8e-17
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-16
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		9e-16
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-15
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		3e-14
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		1e-13
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-12
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-12
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		4e-12
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		4e-12
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		7e-12
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		4e-11
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		9e-11
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		2e-09
1sp2_A	31	Nmr Structure Of A Zinc Finger Domain From Transcri		2e-09
2j7j_A	85	Invariance Of The Zinc Finger Module: A Comparison		3e-09
1un6_B	87	The Crystal Structure Of A Zinc Finger - Rna Comple		3e-09
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		5e-09
2ent_A	48	Solution Structure Of The Second C2h2-Type Zinc Fin		8e-09
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		2e-08
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		3e-08
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		7e-08
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		2e-07
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		4e-06
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		4e-06
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		7e-05
1va1_A	37	Solution Structure Of Transcription Factor Sp1 Dna		9e-05
2eme_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
1u86_A	35	321-Tw-322 Insertion Mutant Of The Third Zinc Finge		6e-04
1bhi_A	38	Structure Of Transactivation Domain Of Cre-Bp1ATF-2		7e-04
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		8e-04

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score =  129 bits (324), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/87 (65%), Positives = 66/87 (75%)
Query: 260 RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHT 319
           +RRI  C+Y  C K Y KSSHLKAH+RTHTGE+P+ C W GC  RF+RSDEL+RH R HT
Sbjct: 12  KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHT 71
Query: 320 GEKKFGCSICNRRFMRSDHLAKHVKRH 346
           G K F C +CNR F RSDHLA H+KRH
Sbjct: 72  GAKPFQCGVCNRSFSRSDHLALHMKRH 98

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score =  127 bits (318), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/87 (62%), Positives = 64/87 (73%)
Query: 260 RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHT 319
           R     C+Y  CGK Y KSSHLKAH+RTHTGE+P+ C W GCG +F+RSDEL+RH R HT
Sbjct: 3   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 62
Query: 320 GEKKFGCSICNRRFMRSDHLAKHVKRH 346
           G + F C  C+R F RSDHLA H+KRH
Sbjct: 63  GHRPFQCQKCDRAFSRSDHLALHMKRH 89

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/87 (62%), Positives = 64/87 (73%)
Query: 260 RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHT 319
           R     C+Y  CGK Y KSSHLKAH+RTHTGE+P+ C W GCG +F+RSDEL+RH R HT
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 320 GEKKFGCSICNRRFMRSDHLAKHVKRH 346
           G + F C  C+R F RSDHLA H+KRH
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 48/87 (55%), Positives = 58/87 (66%)
Query: 261 RRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTG 320
           +R F C Y  C K YFK SHL+ H R HTGE+P+ C +  C RRFSRSD+L RH+R HTG
Sbjct: 4   KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63
Query: 321 EKKFGCSICNRRFMRSDHLAKHVKRHS 347
            K F C  C R+F RSDHL  H + H+
Sbjct: 64  VKPFQCKTCQRKFSRSDHLKTHTRTHT 90

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/68 (64%), Positives = 51/68 (75%)
Query: 251 SNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDE 310
           S+ P  +  R R   C++  CGK YFKSSHLKAH RTHTGE+PF C W GC RRF+RSDE
Sbjct: 5   SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64
Query: 311 LSRHKRTH 318
           LSRH+RTH
Sbjct: 65  LSRHRRTH 72

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI--CNRRFMRSDHLAKHVKRH 346
           R  +C   GCG+ + +S  L  H RTHTGEK F CS   C RRF RSD L++H + H
Sbjct: 16  RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 39/76 (51%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 271 CGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICN 330
           CGK++ +SS+L+ H RTHTGE+P+ C    CG+ FS+S +L +H+RTHTGEK + C  C 
Sbjct: 10  CGKSFSQSSNLQKHQRTHTGEKPYKC--PECGKSFSQSSDLQKHQRTHTGEKPYKCPECG 67
Query: 331 RRFMRSDHLAKHVKRH 346
           + F RSDHL++H + H
Sbjct: 68  KSFSRSDHLSRHQRTH 83

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/85 (50%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
           R + C  E+C + +  SS+L  H+R HTG++PF C+   C R FSRSD L+ H RTHTGE
Sbjct: 3   RPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGE 60
Query: 322 KKFGCSICNRRFMRSDHLAKHVKRH 346
           K F C IC R+F RSD   +H K H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
           R + C  E+C + + +S+ L  H+R HTG++PF C+   C R FSRSD L+ H RTHTGE
Sbjct: 3   RPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGE 60
Query: 322 KKFGCSICNRRFMRSDHLAKHVKRH 346
           K F C IC R+F RSD   +H K H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
           R + C  E+C + + +S+ L  H+R HTG++PF C+   C R FSRSD L+ H RTHTGE
Sbjct: 3   RPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGE 60
Query: 322 KKFGCSICNRRFMRSDHLAKHVKRH 346
           K F C IC R+F RSD   +H K H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
           R + C  E+C + + +S  L  H+R HTG++PF C+   C R FSRSD L+ H RTHTGE
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGE 60
Query: 322 KKFGCSICNRRFMRSDHLAKHVKRH 346
           K F C IC R+F RSD   +H K H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 84.7 bits (208), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
           R + C  E+C + + +S  L  H+R HTG++PF C+   C R FSRSD L+ H RTHTGE
Sbjct: 2   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGE 59
Query: 322 KKFGCSICNRRFMRSDHLAKHVKRH 346
           K F C IC R+F RSD   +H K H
Sbjct: 60  KPFACDICGRKFARSDERKRHTKIH 84

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
           R + C  E+C + + +S  L  H+R HTG++PF C+   C R FSRSD L+ H RTHTGE
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGE 60
Query: 322 KKFGCSICNRRFMRSDHLAKHVKRH 346
           K F C IC R+F RSD   +H K H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
           R + C  E+C + + +S  L  H+R HTG++PF C+   C R FSRSD L+ H RTHTGE
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGE 60
Query: 322 KKFGCSICNRRFMRSDHLAKHVKRH 346
           K F C IC R+F RSD   +H K H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 63/114 (55%), Gaps = 10/114 (8%)
Query: 241 EIVTSNKIKKSNKPATNDPRRRIFECNYENC---GKNYFKSSHLKAHMRTHTGERPFLCQ 297
           E+VT   ++    P  N+       C +E C   GK++     L  H+R HTGE+PF C 
Sbjct: 40  ELVTHVTMEHVGGPEQNN-----HVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCP 94
Query: 298 WTGCGRRFSRSDELSRHKRTHTGEKKFGCSI--CNRRFMRSDHLAKHVKRHSKD 349
           + GCG+ F+RS+ L  HKRTHTGEK F C    C+RRF  S    KH+  H+ D
Sbjct: 95  FPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSD 148

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 255 ATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRH 314
           A  +P  + + C    CGK++ +S HL  H RTHTGE+P+ C    CG+ FS   +L+RH
Sbjct: 13  AALEPGEKPYAC--PECGKSFSRSDHLAEHQRTHTGEKPYKCPE--CGKSFSDKKDLTRH 68
Query: 315 KRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVAFNMM 374
           +RTHTGEK + C  C + F +  +L  H + H+ +        G   + L +        
Sbjct: 69  QRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTH 128
Query: 375 VTNLPHPVP 383
               P+  P
Sbjct: 129 TGEKPYKCP 137

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
           RP+ C    C RRFSRSDEL+RH R HTG+K F C IC R F RSDHL  H++ H+
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 256 TNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHK 315
           T+ PR  +       CGK + +SS LK H   HTGE+PF C + GCG+RFS    L  H 
Sbjct: 29  THGPRVHV----CAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHV 84
Query: 316 RTHTGEKKFGCSI--CNRRFMRSDHLAKHVKRHSK 348
           R HTG++ + C    CN++F +S +L  H+  H+K
Sbjct: 85  RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
           R + C  E+C + + + ++L  H+R HTG++PF C+   C R FS+   L+ H RTHTGE
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRI--CMRNFSQQASLNAHIRTHTGE 60
Query: 322 KKFGCSICNRRFMRSDHLAKHVKRH 346
           K F C IC R+F       +H K H
Sbjct: 61  KPFACDICGRKFATLHTRTRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
           R + C  E+C + + + ++L  H+R HTG++PF C+   C R FS+   L++H RTHTGE
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRI--CMRNFSQHTGLNQHIRTHTGE 60
Query: 322 KKFGCSICNRRFMRSDHLAKHVKRH 346
           K F C IC R+F       +H K H
Sbjct: 61  KPFACDICGRKFATLHTRDRHTKIH 85

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 261 RRIFECNYENCGKNY--FKSSH-LKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRT 317
           R+ F C++  C +    FK+ + L  HMR HTGE+P  C + GC + +SR + L  H R+
Sbjct: 32  RKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRS 91
Query: 318 HTGEKKFGCSI--CNRRFMRSDHLAKHVKR 345
           HTGEK + C    C++ F  +   AKH  R
Sbjct: 92  HTGEKPYMCEHEGCSKAFSNASDRAKHQNR 121

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 266 CNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFG 325
           C++ +CG  Y K+  L+AH+  HTGE+PF C+  GC + F+    L+RH  THTGEK F 
Sbjct: 6   CSFADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFT 65
Query: 326 CSI--CNRRFMRSDHLAKHVKR 345
           C    C+ RF    ++ KH  R
Sbjct: 66  CDSDGCDLRFTTKANMKKHFNR 87

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           + C++ +CG  Y K+  L+AH+  HTGE+PF C+  GC + F+    L+RH  THTGEK 
Sbjct: 13  YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKN 72
Query: 324 FGCSI--CNRRFMRSDHLAKHVKR 345
           F C    C+ RF    ++ KH  R
Sbjct: 73  FTCDSDGCDLRFTTKANMKKHFNR 96

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 269 ENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE--KKFGC 326
           E CGK +    HL  H  +H+GE+P+ C    CG RF R D +S H R+H G   K + C
Sbjct: 11  EICGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 327 SICNRRFMRSDHLAKHVKR 345
             C + F R DHL  H+K+
Sbjct: 69  QSCGKGFSRPDHLNGHIKQ 87

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           F+C    CGK++ +SS L  H+  H+  RP+ CQ+  CG+RF +  ++ +H   HTGEK 
Sbjct: 2   FDCKI--CGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKP 57
Query: 324 FGCSICNRRFMRSDHLAKHVKRHS 347
             C +C + F +S +L  H ++H+
Sbjct: 58  HKCQVCGKAFSQSSNLITHSRKHT 81

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKH 342
           +PF C+   C R FSRSD L+ H RTHTGEK F C IC R+F RSD   +H
Sbjct: 2   KPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 50

>pdb|1SP2|A Chain A, Nmr Structure Of A Zinc Finger Domain From Transcription Factor Sp1f2, Minimized Average Structure Length = 31

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/31 (77%), Positives = 28/31 (90%)
Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
           RPF+C W+ CG+RF+RSDEL RHKRTHTGEK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>pdb|2J7J|A Chain A, Invariance Of The Zinc Finger Module: A Comparison Of The Free Structure With Those In Nucleic-Acid Complexes Length = 85

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 263 IFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTG-- 320
           ++ C++ENCGK + K + LK H  +HT + P+ C   GC +RFS    L RH++ H G  
Sbjct: 1   MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60
Query: 321 -EKKFGCSICNR 331
            +K   CS   +
Sbjct: 61  CKKDDSCSFVGK 72

>pdb|1UN6|B Chain B, The Crystal Structure Of A Zinc Finger - Rna Complex Reveals Two Modes Of Molecular Recognition Length = 87

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 263 IFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTG-- 320
           ++ C++ENCGK + K + LK H  +HT + P+ C   GC +RFS    L RH++ H G  
Sbjct: 1   MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60
Query: 321 -EKKFGCSICNR 331
            +K   CS   +
Sbjct: 61  CKKDDSCSFVGK 72

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           F C +  CG+++ KS +L  H RTHT ERP+ C    C + F R D L  H+  H+ EK 
Sbjct: 18  FICKF--CGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKP 73
Query: 324 FGCSICNRRFMRSDHLAKHVKRHSKDGAITPSN 356
           F C  C + F +S  LA H   H +  + T ++
Sbjct: 74  FKCQECGKGFCQSRTLAVHKTLHMQTSSPTAAS 106

>pdb|2ENT|A Chain A, Solution Structure Of The Second C2h2-Type Zinc Finger Domain From Human Krueppel-Like Factor 15 Length = 48

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/37 (67%), Positives = 29/37 (78%)
Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           E+PF C W GCG RFSRSDELSRH+R+H+G K  G S
Sbjct: 10  EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
           +++ C    CGK++   S    HM  H G RP+ C    CG++F     L  H + HTG 
Sbjct: 9   KLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGI 63
Query: 322 KKFGCSICNRRFMRSDHLAKHV 343
           K + C+IC +RFM  D   +HV
Sbjct: 64  KPYECNICAKRFMWRDSFHRHV 85

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 301 CGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDG 350
           CG+ FS S +LS+H+RTHTGEK + C  C + F++  HL  H + H+  G
Sbjct: 24  CGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSG 73

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 269 ENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI 328
           E CGK + +   LK HMR HTG +P+ C+   C    + S  L++H R H+ E+ F C I
Sbjct: 12  EVCGKCFSRKDKLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 329 CNRRFMRSDHLAKHVKRHSKD 349
           C      S  L  H++ H+ D
Sbjct: 70  CPYASRNSSQLTVHLRSHTGD 90

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 294 FLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKR 345
           F+C+   C R F+R + L RH R+HT EK + C +CNR F R D L +H ++
Sbjct: 3   FVCEV--CTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQK 52

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
           E+P+ C    CG+ FSRS  L +H+R HTGEK + C  C + F ++  L  H + H+
Sbjct: 12  EKPYGC--VECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT 66

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 44/107 (41%), Gaps = 30/107 (28%)
Query: 271 CGKNYFKSSHLKAHMRTHTGERPFLCQWTG-----------------------------C 301
           C K +    +LK H R HTGE+PF C   G                             C
Sbjct: 13  CHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVC 72
Query: 302 GRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKH-VKRHS 347
              F R  EL  H  +HTGE  + CS C+++FM+   L  H +K HS
Sbjct: 73  QETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 CGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICN 330
           C ++Y   + L+ H   H+ E+ + C++  C + F  ++  ++H+  HTGE+++ C  C 
Sbjct: 28  CKRSYVCLTSLRRHFNIHSWEKKYPCRY--CEKVFPLAEYRTKHEIHHTGERRYQCLACG 85
Query: 331 RRFMRSDHLAKHVKR-HSKD 349
           + F+    ++ H+K  HS+D
Sbjct: 86  KSFINYQFMSSHIKSVHSQD 105

>pdb|1VA1|A Chain A, Solution Structure Of Transcription Factor Sp1 Dna Binding Domain (Zinc Finger 1) Length = 37

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/36 (52%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 258 DP-RRRIFECNYENCGKNYFKSSHLKAHMRTHTGER 292
           DP +++   C+ + CGK Y K+SHL+AH+R HTGER
Sbjct: 2   DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>pdb|2EME|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 725- 757) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           E+P++C +  CG+ F  S EL RH+R HTGEK  G S
Sbjct: 10  EKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPSGPS 44

>pdb|1U86|A Chain A, 321-Tw-322 Insertion Mutant Of The Third Zinc Finger Of Bklf Length = 35

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 289 TGERPFLCQWTGCGRRFSRSDELSRHKRTH 318
           TG +PF C W  C R FSRSD L+ H++ H
Sbjct: 3   TGIKPFQCTWPDCDRSFSRSDHLALHRKRH 32

>pdb|1BHI|A Chain A, Structure Of Transactivation Domain Of Cre-Bp1ATF-2, Nmr, 20 Structures Length = 38

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFG 325
           ++PFLC   GCG+RF+  D L+ HK  H    KFG
Sbjct: 4   DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG 38

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 269 ENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
           + C  ++    +L +H   HTGE+P+ C    CG +F+R   L  H R H+GEK
Sbjct: 21  DRCQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEK 72

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	384
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-58
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-23
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-56
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-46
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-17
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-40
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-24
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-08
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-38
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-32
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-20
2epa_A	72	Krueppel-like factor 10; transforming growth facto	8e-37
2epa_A	72	Krueppel-like factor 10; transforming growth facto	4e-26
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-34
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-24
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-20
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-33
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-31
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-25
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	9e-22
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-12
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	7e-32
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-27
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-27
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-26
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-20
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-31
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-29
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-24
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-19
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-30
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-28
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-27
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-13
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-29
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-18
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-17
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-29
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-21
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-28
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-18
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-18
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-28
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-11
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-27
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-18
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-27
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-20
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-18
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-26
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-18
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-26
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-23
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-21
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-26
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-25
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-18
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-16
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-25
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-24
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-24
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-21
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-18
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-09
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-25
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-21
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-20
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-24
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-19
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-23
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-19
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-22
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-19
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-08
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	9e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-21
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-18
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-21
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-20
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-20
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-19
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-19
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-16
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-19
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-19
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	2e-17
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	5e-08
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-16
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-10
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	1e-16
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	4e-13
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	5e-16
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	8e-16
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	7e-08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	4e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-15
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-15
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-15
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-09
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-15
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-15
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-15
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-15
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-15
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-09
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-15
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-15
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-15
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-15
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-15
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-15
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-07
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-15
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-15
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-15
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-15
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-09
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	5e-15
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-10
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-15
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-15
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-09
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-15
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-07
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-15
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-15
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-14
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-14
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-14
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-14
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-14
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-14
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-08
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-14
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-14
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-14
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-14
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-14
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-14
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-14
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-14
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-14
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-14
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-07
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-14
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-14
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-14
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-14
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	8e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	6e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-14
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-09
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-14
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-14
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-09
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-14
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-14
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-14
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-14
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-14
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-14
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-14
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-14
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-14
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-07
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-14
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-14
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-14
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-14
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-14
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-14
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-14
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-14
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-08
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-14
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-14
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-14
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-14
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-14
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-07
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-14
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-14
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-14
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-08
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-14
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-14
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-14
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-14
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-14
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-08
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-13
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-08
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	6e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-13
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-06
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-13
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-06
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-13
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-08
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-13
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	9e-08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-13
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-13
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-13
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-09
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	9e-07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	4e-13
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-08
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-13
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-12
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	9e-08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	3e-11
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	7e-11
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-10
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	5e-07
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	4e-04
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	4e-10
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	2e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	8e-10
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	9e-07
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	1e-09
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	5e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-09
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-09
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	8e-08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	8e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	5e-09
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-06
1ard_A	29	Yeast transcription factor ADR1; transcription reg	6e-09
1ard_A	29	Yeast transcription factor ADR1; transcription reg	3e-06
1ard_A	29	Yeast transcription factor ADR1; transcription reg	4e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	6e-09
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	7e-07
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	9e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	8e-09
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	9e-08
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	2e-06
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	3e-05
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic} Len	9e-06
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	5e-05
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	9e-05
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	5e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	3e-04

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score =  182 bits (464), Expect = 8e-58
 Identities = 58/97 (59%), Positives = 68/97 (70%)

Query: 250 KSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSD 309
            S     +  +RRI  C+Y  C K Y KSSHLKAH+RTHTGE+P+ C W GC  RF+RSD
Sbjct: 2   SSGSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSD 61

Query: 310 ELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
           EL+RH R HTG K F C +CNR F RSDHLA H+KRH
Sbjct: 62  ELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 93.1 bits (232), Expect = 1e-23
 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHT 319
           ++C +E C   + +S  L  H R HTG +PF C    C R FSRSD L+ H + H 
Sbjct: 46  YKCTWEGCDWRFARSDELTRHYRKHTGAKPFQC--GVCNRSFSRSDHLALHMKRHQ 99

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score =  179 bits (456), Expect = 1e-56
 Identities = 54/87 (62%), Positives = 64/87 (73%)

Query: 260 RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHT 319
           R     C+Y  CGK Y KSSHLKAH+RTHTGE+P+ C W GCG +F+RSDEL+RH R HT
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 320 GEKKFGCSICNRRFMRSDHLAKHVKRH 346
           G + F C  C+R F RSDHLA H+KRH
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score =  151 bits (384), Expect = 5e-46
 Identities = 28/83 (33%), Positives = 41/83 (49%)

Query: 263 IFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
           ++ C++ENCGK + K + LK H  +HT + P+ C   GC +RFS    L RH++ H G  
Sbjct: 1   MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60

Query: 323 KFGCSICNRRFMRSDHLAKHVKR 345
                 C+          KHV  
Sbjct: 61  CKKDDSCSFVGKTWTLYLKHVAE 83

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 76.1 bits (188), Expect = 1e-17
 Identities = 13/56 (23%), Positives = 18/56 (32%), Gaps = 3/56 (5%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSR-HKRTH 318
           +EC +E C K +   S LK H + H G          C           +     H
Sbjct: 32  YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD--SCSFVGKTWTLYLKHVAECH 85

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score =  137 bits (346), Expect = 1e-40
 Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 2/71 (2%)

Query: 277 KSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRS 336
             ++L  ++      RP+ C    C RRFSRSDEL+RH R HTG+K F C IC R F RS
Sbjct: 5   PMNNLLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRS 62

Query: 337 DHLAKHVKRHS 347
           DHL  H++ H+
Sbjct: 63  DHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 93.1 bits (232), Expect = 6e-24
 Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 249 KKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRS 308
             +N      P+ R + C  E+C + + +S  L  H+R HTG++PF C    C R FSRS
Sbjct: 5   PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRS 62

Query: 309 DELSRHKRTHT 319
           D L+ H RTHT
Sbjct: 63  DHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 49.2 bits (118), Expect = 3e-08
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 4/46 (8%)

Query: 304 RFSRSDELSRHKRTHTGEKKFGCSI--CNRRFMRSDHLAKHVKRHS 347
                + L  +       + + C +  C+RRF RSD L +H++ H+
Sbjct: 2   EPHPMNNLLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHT 45

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  133 bits (338), Expect = 1e-38
 Identities = 47/83 (56%), Positives = 55/83 (66%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           F C Y  C K YFK SHL+ H R HTGE+P+ C +  C RRFSRSD+L RH+R HTG K 
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 324 FGCSICNRRFMRSDHLAKHVKRH 346
           F C  C R+F RSDHL  H + H
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTH 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  116 bits (294), Expect = 3e-32
 Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 4/85 (4%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           ++C++++C + + +S  LK H R HTG +PF C    C R+FSRSD L  H RTHTGEK 
Sbjct: 37  YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQC--KTCQRKFSRSDHLKTHTRTHTGEKP 94

Query: 324 FGCSI--CNRRFMRSDHLAKHVKRH 346
           F C    C ++F RSD L +H   H
Sbjct: 95  FSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 83.7 bits (208), Expect = 6e-20
 Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 2/60 (3%)

Query: 289 TGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI--CNRRFMRSDHLAKHVKRH 346
           + +RPF+C + GC +R+ +   L  H R HTGEK + C    C RRF RSD L +H +RH
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score =  127 bits (320), Expect = 8e-37
 Identities = 44/70 (62%), Positives = 51/70 (72%)

Query: 249 KKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRS 308
             S+ P  +  R R   C++  CGK YFKSSHLKAH RTHTGE+PF C W GC RRF+RS
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62

Query: 309 DELSRHKRTH 318
           DELSRH+RTH
Sbjct: 63  DELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 99.0 bits (247), Expect = 4e-26
 Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 278 SSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI--CNRRFMR 335
           SS         +  R  +C   GCG+ + +S  L  H RTHTGEK F CS   C RRF R
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 336 SDHLAKHVKRH 346
           SD L++H + H
Sbjct: 62  SDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 44.7 bits (106), Expect = 1e-06
 Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 308 SDELSRHKRTHTGEKKFGCSI--CNRRFMRSDHLAKHVKRHS 347
           S   S  +   +  +   CS   C + + +S HL  H + H+
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHT 43

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score =  121 bits (306), Expect = 2e-34
 Identities = 41/83 (49%), Positives = 52/83 (62%), Gaps = 2/83 (2%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           + C  E+C + + +S  L  H+R HTG++PF C    C R FSRSD L+ H RTHTGEK 
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 324 FGCSICNRRFMRSDHLAKHVKRH 346
           F C IC R+F RSD   +H K H
Sbjct: 63  FACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 94.5 bits (236), Expect = 3e-24
 Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 4/59 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
           F+C    C +N+ +S HL  H+RTHTGE+PF C    CGR+F+RSDE  RH + H  +K
Sbjct: 35  FQC--RICMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 84.8 bits (211), Expect = 1e-20
 Identities = 31/56 (55%), Positives = 37/56 (66%)

Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
           ERP+ C    C RRFS+S  L+RH R HTG+K F C IC R F RSDHL  H++ H
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 57

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  121 bits (305), Expect = 2e-33
 Identities = 33/87 (37%), Positives = 55/87 (63%), Gaps = 3/87 (3%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHK-RTHTGEK 322
            +C +E C K+Y +  +LK H+R+HTGE+P++C+  GC + FS + + ++H+ RTH+ EK
Sbjct: 68  HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK 127

Query: 323 KFGCSI--CNRRFMRSDHLAKHVKRHS 347
            + C +  C +R+     L KHVK   
Sbjct: 128 PYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  115 bits (290), Expect = 3e-31
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 2/83 (2%)

Query: 265 ECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKF 324
                   + +     L  HMR HTGE+P  C + GC + +SR + L  H R+HTGEK +
Sbjct: 39  WGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPY 98

Query: 325 GC--SICNRRFMRSDHLAKHVKR 345
            C    C++ F  +   AKH  R
Sbjct: 99  MCEHEGCSKAFSNASDRAKHQNR 121

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 98.4 bits (246), Expect = 5e-25
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 10/91 (10%)

Query: 264 FECNYENCGKNYFKSSHLKAHM---RTHTGERPFLCQWTGC---GRRFSRSDELSRHKRT 317
                + C + +     L  H+     H   + F+C W GC    R F     L  H R 
Sbjct: 4   CRW--DGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 318 HTGEKKFGCSI--CNRRFMRSDHLAKHVKRH 346
           HTGEK   C+   C + + R ++L  H++ H
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRLENLKTHLRSH 92

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 89.6 bits (223), Expect = 9e-22
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 264 FECNYENCGKNYFKSSHLKAHM-RTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTG 320
           + C +E C K +  +S    H  RTH+ E+P++C+  GC +R++    L +H +T  G
Sbjct: 98  YMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 63.4 bits (155), Expect = 3e-12
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 10/65 (15%)

Query: 291 ERPFLCQWTGCGRRFSRSDELSRH---KRTHTGEKKF-----GCSICNRRFMRSDHLAKH 342
           E    C+W GC + F   ++L  H   +  H   K+F     GCS   R F     L  H
Sbjct: 1   ETD--CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH 58

Query: 343 VKRHS 347
           ++RH+
Sbjct: 59  MRRHT 63

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  118 bits (297), Expect = 7e-32
 Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           + C++ +CG  Y K+  L+AH+  HTGE+PF C+  GC + F+    L+RH  THTGEK 
Sbjct: 13  YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKN 72

Query: 324 FGCS--ICNRRFMRSDHLAKHVKRH 346
           F C    C+ RF    ++ KH  R 
Sbjct: 73  FTCDSDGCDLRFTTKANMKKHFNRF 97

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  106 bits (267), Expect = 1e-27
 Identities = 28/82 (34%), Positives = 40/82 (48%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           + C++ENCGK + K + LK H  +HT + P+ C   GC +RFS    L RH++ H G   
Sbjct: 105 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 164

Query: 324 FGCSICNRRFMRSDHLAKHVKR 345
                C+          KHV  
Sbjct: 165 KKDDSCSFVGKTWTLYLKHVAE 186

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  105 bits (265), Expect = 3e-27
 Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 4/87 (4%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           F C  E C K +    HL  H  THTGE+ F C   GC  RF+    + +H       K 
Sbjct: 43  FPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKI 102

Query: 324 --FGCSI--CNRRFMRSDHLAKHVKRH 346
             + C    C + F + + L  H   H
Sbjct: 103 CVYVCHFENCGKAFKKHNQLKVHQFSH 129

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  102 bits (256), Expect = 5e-26
 Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 4/87 (4%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGER--PFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
           F C+ + C   +   +++K H       +   ++C +  CG+ F + ++L  H+ +HT +
Sbjct: 73  FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ 132

Query: 322 KKFGCS--ICNRRFMRSDHLAKHVKRH 346
             + C    C++RF     L +H K H
Sbjct: 133 LPYECPHEGCDKRFSLPSRLKRHEKVH 159

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 86.1 bits (214), Expect = 4e-20
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS--ICNRRFMRSDHLA 340
                    + ++C +  CG  ++++ +L  H   HTGEK F C    C + F    HL 
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 341 KHVKRH 346
           +H   H
Sbjct: 62  RHSLTH 67

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  116 bits (292), Expect = 1e-31
 Identities = 42/97 (43%), Positives = 54/97 (55%), Gaps = 4/97 (4%)

Query: 253 KPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELS 312
            P  N+      EC     GK++     L  H+R HTGE+PF C + GCG+ F+RS+ L 
Sbjct: 52  GPEQNNHVCYWEECP--REGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLK 109

Query: 313 RHKRTHTGEKKFGCSI--CNRRFMRSDHLAKHVKRHS 347
            HKRTHTGEK F C    C+RRF  S    KH+  H+
Sbjct: 110 IHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT 146

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  109 bits (275), Expect = 4e-29
 Identities = 29/64 (45%), Positives = 40/64 (62%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           F C +  CGK + +S +LK H RTHTGE+PF C++ GC RRF+ S +  +H   HT +K 
Sbjct: 91  FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS 150

Query: 324 FGCS 327
              S
Sbjct: 151 GPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 97.4 bits (243), Expect = 1e-24
 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 11/92 (11%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPF----LCQWTGC---GRRFSRSDELSRHKR 316
                ++C + +     L  H+       P     +C W  C   G+ F    +L  H R
Sbjct: 26  RPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83

Query: 317 THTGEKKFGCSI--CNRRFMRSDHLAKHVKRH 346
            HTGEK F C    C + F RS++L  H + H
Sbjct: 84  VHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 83.1 bits (206), Expect = 2e-19
 Identities = 13/87 (14%), Positives = 21/87 (24%), Gaps = 11/87 (12%)

Query: 270 NCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKF----- 324
           + G +        +       +         C R FS   EL  H               
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHV 59

Query: 325 ----GCSICNRRFMRSDHLAKHVKRHS 347
                C    + F     L  H++ H+
Sbjct: 60  CYWEECPREGKSFKAKYKLVNHIRVHT 86

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  112 bits (284), Expect = 1e-30
 Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 4/85 (4%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
             C    CGK + +SS LK H   HTGE+PF C + GCG+RFS    L  H R HTG++ 
Sbjct: 35  HVCA--ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP 92

Query: 324 FGCSI--CNRRFMRSDHLAKHVKRH 346
           + C    CN++F +S +L  H+  H
Sbjct: 93  YVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  104 bits (263), Expect = 8e-28
 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 5/85 (5%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
             C ++ C K +  +S ++ H+ TH G R  +C    CG+ F  S +L RH+  HTGEK 
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVC--AECGKAFVESSKLKRHQLVHTGEKP 62

Query: 324 FGCSI--CNRRFMRSDHLAKHVKRH 346
           F C+   C +RF    +L  HV+ H
Sbjct: 63  FQCTFEGCGKRFSLDFNLRTHVRIH 87

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  102 bits (257), Expect = 8e-27
 Identities = 24/61 (39%), Positives = 38/61 (62%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           F+C +E CGK +    +L+ H+R HTG+RP++C + GC ++F++S  L  H  TH   K 
Sbjct: 63  FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN 122

Query: 324 F 324
            
Sbjct: 123 N 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 65.6 bits (161), Expect = 2e-13
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
            R   C   GC + F  +  + +H  TH G +   C+ C + F+ S  L +H   H
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVH 57

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score =  108 bits (273), Expect = 1e-29
 Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 5/83 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           F+C    C +N+ +S HL  H+RTHTGE+PF C    CGR+F+RSDE  RH+        
Sbjct: 4   FQC--RICMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRHRDIQH-ILP 58

Query: 324 FGCSICNRRFMRSDHLAKHVKRH 346
                      ++ HL   V R 
Sbjct: 59  ILEDKVEELLSKNYHLENEVARL 81

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 77.2 bits (191), Expect = 5e-18
 Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 8/62 (12%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHK---RTHTG 320
           F C  + CG+ + +S   K H        P L          S++  L       +   G
Sbjct: 32  FAC--DICGRKFARSDERKRHRDIQH-ILPILE--DKVEELLSKNYHLENEVARLKKLVG 86

Query: 321 EK 322
           E+
Sbjct: 87  ER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 74.5 bits (184), Expect = 6e-17
 Identities = 29/55 (52%), Positives = 33/55 (60%), Gaps = 2/55 (3%)

Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
           +PF C    C R FSRSD L+ H RTHTGEK F C IC R+F RSD   +H    
Sbjct: 2   KPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ 54

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score =  108 bits (272), Expect = 1e-29
 Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 264 FECNYENCGKNYFKSSHLKAHMR-THTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
             C++  CG+ +    +L  H +  H  ++ F C    CG+ F+    L  H + H+  +
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 323 KFGCSICNRRF 333
            + C       
Sbjct: 68  DYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 85.7 bits (213), Expect = 4e-21
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 288 HTGERPFLCQWTGCGRRFSRSDELSRHKR-THTGEKKFGCS--ICNRRFMRSDHLAKHVK 344
            +G     C + GCGR FS    L+ HK+  H  +K F C    C + F    HL +H+K
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 345 RHS 347
            HS
Sbjct: 62  LHS 64

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score =  106 bits (266), Expect = 2e-28
 Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 6/84 (7%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE-- 321
             C    CGK +    HL  H  +H+GE+P+ C    CG RF R D +S H R+H G   
Sbjct: 8   VACE--ICGKIFRDVYHLNRHKLSHSGEKPYSC--PVCGLRFKRKDRMSYHVRSHDGSVG 63

Query: 322 KKFGCSICNRRFMRSDHLAKHVKR 345
           K + C  C + F R DHL  H+K+
Sbjct: 64  KPYICQSCGKGFSRPDHLNGHIKQ 87

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 79.5 bits (197), Expect = 1e-18
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)

Query: 288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
            +G     C    CG+ F     L+RHK +H+GEK + C +C  RF R D ++ HV+ H
Sbjct: 2   SSGSSGVAC--EICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH 58

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 78.3 bits (194), Expect = 3e-18
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGE--RPFLCQWTGCGRRFSRSDELSRH-KRTHTG 320
           + C    CG  + +   +  H+R+H G   +P++C    CG+ FSR D L+ H K+ H+G
Sbjct: 36  YSCP--VCGLRFKRKDRMSYHVRSHDGSVGKPYIC--QSCGKGFSRPDHLNGHIKQVHSG 91

Query: 321 EK 322
             
Sbjct: 92  PS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 10/30 (33%), Positives = 13/30 (43%)

Query: 318 HTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
            +G     C IC + F    HL +H   HS
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHS 31

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score =  103 bits (259), Expect = 4e-28
 Identities = 27/45 (60%), Positives = 33/45 (73%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+PF C W GCG RFSRSDELSRH+R+H+G K  G S
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 57.7 bits (140), Expect = 2e-11
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQ 297
           F C +  CG  + +S  L  H R+H+G +P    
Sbjct: 13  FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score =  102 bits (258), Expect = 2e-27
 Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 4/83 (4%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           F+C    CGK++ +SS L  H+  H+  RP+ CQ+  CG+RF +  ++ +H   HTGEK 
Sbjct: 2   FDCK--ICGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKP 57

Query: 324 FGCSICNRRFMRSDHLAKHVKRH 346
             C +C + F +S +L  H ++H
Sbjct: 58  HKCQVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 77.8 bits (193), Expect = 2e-18
 Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 4/57 (7%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTG 320
           + C Y  CGK + + S +K H   HTGE+P  CQ   CG+ FS+S  L  H R HTG
Sbjct: 30  YPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQV--CGKAFSQSSNLITHSRKHTG 82

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  102 bits (256), Expect = 5e-27
 Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
            +C    CGK + +   LK HMR HTG +P+ C+   C    + S  L++H R H+ E+ 
Sbjct: 9   HKCEV--CGKCFSRKDKLKTHMRCHTGVKPYKCK--TCDYAAADSSSLNKHLRIHSDERP 64

Query: 324 FGCSICNRRFMRSDHLAKHVKRH 346
           F C IC      S  L  H++ H
Sbjct: 65  FKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 84.8 bits (211), Expect = 1e-20
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 4/63 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           ++C    C      SS L  H+R H+ ERPF CQ   C      S +L+ H R+HTG+  
Sbjct: 37  YKCK--TCDYAAADSSSLNKHLRIHSDERPFKCQI--CPYASRNSSQLTVHLRSHTGDSG 92

Query: 324 FGC 326
              
Sbjct: 93  PSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 78.6 bits (195), Expect = 2e-18
 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 287 THTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
           +     P  C+   CG+ FSR D+L  H R HTG K + C  C+     S  L KH++ H
Sbjct: 2   SSGSSGPHKCE--VCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH 59

Query: 347 S 347
           S
Sbjct: 60  S 60

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score =  100 bits (251), Expect = 1e-26
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 280 HLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE--KKFGCSICNRRFMRSD 337
              +  RTH+GE+P+ C    C  RF++S  +  H      E   KF C  C+    R  
Sbjct: 2   SSGSSGRTHSGEKPYEC--YICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKS 59

Query: 338 HLAKHVKRH 346
            L  H+++ 
Sbjct: 60  DLGVHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 77.2 bits (191), Expect = 4e-18
 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 7/62 (11%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGE--RPFLCQWTGCGRRFSRSDELSRHKRT-HTG 320
           +EC    C   + +S  +K H+     E    F C    C    +R  +L  H R  H+ 
Sbjct: 16  YECYI--CHARFTQSGTMKMHILQKHTENVAKFHC--PHCDTVIARKSDLGVHLRKQHSY 71

Query: 321 EK 322
             
Sbjct: 72  SG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 3/32 (9%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRT-HTGERPF 294
           F C +  C     + S L  H+R  H+   P 
Sbjct: 46  FHCPH--CDTVIARKSDLGVHLRKQHSYSGPS 75

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 99.8 bits (250), Expect = 4e-26
 Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 4/83 (4%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           F C    CG+++ KS +L  H RTHT ERP+ C    C + F R D L  H+  H+ EK 
Sbjct: 18  FICK--FCGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKP 73

Query: 324 FGCSICNRRFMRSDHLAKHVKRH 346
           F C  C + F +S  LA H   H
Sbjct: 74  FKCQECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 93.3 bits (233), Expect = 1e-23
 Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)

Query: 278 SSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSD 337
           SS           ++ F+C+   CGR F++S  L  H+RTHT E+ + C IC++ F R D
Sbjct: 2   SSGSSGGRLPSKTKKEFICK--FCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQD 59

Query: 338 HLAKHVKRHS 347
           HL  H   HS
Sbjct: 60  HLRDHRYIHS 69

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 85.6 bits (213), Expect = 8e-21
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           + C+   C K + +  HL+ H   H+ E+PF CQ   CG+ F +S  L+ HK  H     
Sbjct: 46  YTCD--ICHKAFRRQDHLRDHRYIHSKEKPFKCQ--ECGKGFCQSRTLAVHKTLHMQTSS 101

Query: 324 FGCS 327
              +
Sbjct: 102 PTAA 105

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 99.9 bits (250), Expect = 6e-26
 Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 7/85 (8%)

Query: 264 FECNYENCGKNYFKSSHLKAHMR---THTGERPFLCQWTGCGRRFSRSDELSRHKRTHTG 320
           FEC    CGK YF+  +L  H      +  E+ F C  + C   F R  EL  H  +HTG
Sbjct: 36  FECP--KCGKCYFRKENLLEHEARNCMNRSEQVFTC--SVCQETFRRRMELRLHMVSHTG 91

Query: 321 EKKFGCSICNRRFMRSDHLAKHVKR 345
           E  + CS C+++FM+   L  H+ +
Sbjct: 92  EMPYKCSSCSQQFMQKKDLQSHMIK 116

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 98.7 bits (247), Expect = 2e-25
 Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 7/86 (8%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKR---THTG 320
            EC    C K +    +LK H R HTGE+PF C    CG+ + R + L  H+     +  
Sbjct: 8   VECP--TCHKKFLSKYYLKVHNRKHTGEKPFEC--PKCGKCYFRKENLLEHEARNCMNRS 63

Query: 321 EKKFGCSICNRRFMRSDHLAKHVKRH 346
           E+ F CS+C   F R   L  H+  H
Sbjct: 64  EQVFTCSVCQETFRRRMELRLHMVSH 89

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 79.1 bits (196), Expect = 2e-18
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 5/60 (8%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHK-RTHTGEK 322
           F C+   C + + +   L+ HM +HTGE P+ C  + C ++F +  +L  H  + H+G  
Sbjct: 67  FTCS--VCQETFRRRMELRLHMVSHTGEMPYKC--SSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 73.3 bits (181), Expect = 3e-16
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKH 342
            +G     C    C ++F     L  H R HTGEK F C  C + + R ++L +H
Sbjct: 2   SSGSSGVEC--PTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH 54

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  100 bits (252), Expect = 2e-25
 Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 4/83 (4%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           + C    CGK++ +S HL  H RTHTGE+P+ C    CG+ FS   +L+RH+RTHTGEK 
Sbjct: 22  YACP--ECGKSFSRSDHLAEHQRTHTGEKPYKCPE--CGKSFSDKKDLTRHQRTHTGEKP 77

Query: 324 FGCSICNRRFMRSDHLAKHVKRH 346
           + C  C + F +  +L  H + H
Sbjct: 78  YKCPECGKSFSQRANLRAHQRTH 100

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 98.7 bits (247), Expect = 1e-24
 Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 4/83 (4%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           + C    CGK++ + +HL+AH RTHTGE+P+ C    CG+ FSR D L  H+RTHTGEK 
Sbjct: 106 YACP--ECGKSFSQLAHLRAHQRTHTGEKPYKC--PECGKSFSREDNLHTHQRTHTGEKP 161

Query: 324 FGCSICNRRFMRSDHLAKHVKRH 346
           + C  C + F R D L  H + H
Sbjct: 162 YKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 98.7 bits (247), Expect = 1e-24
 Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 4/83 (4%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           ++C    CGK++ + ++L+AH RTHTGE+P+ C    CG+ FS+   L  H+RTHTGEK 
Sbjct: 78  YKCP--ECGKSFSQRANLRAHQRTHTGEKPYAC--PECGKSFSQLAHLRAHQRTHTGEKP 133

Query: 324 FGCSICNRRFMRSDHLAKHVKRH 346
           + C  C + F R D+L  H + H
Sbjct: 134 YKCPECGKSFSREDNLHTHQRTH 156

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 89.4 bits (223), Expect = 2e-21
 Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 276 FKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMR 335
           F SS   A      GE+P+ C    CG+ FSRSD L+ H+RTHTGEK + C  C + F  
Sbjct: 4   FGSSSSVAQAALEPGEKPYAC--PECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61

Query: 336 SDHLAKHVKRH 346
              L +H + H
Sbjct: 62  KKDLTRHQRTH 72

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 81.7 bits (203), Expect = 2e-18
 Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 4/59 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
           ++C    CGK++ +  +L  H RTHTGE+P+ C    CG+ FSR D L+ H+RTHTG+K
Sbjct: 134 YKCP--ECGKSFSREDNLHTHQRTHTGEKPYKC--PECGKSFSRRDALNVHQRTHTGKK 188

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 54.0 bits (131), Expect = 7e-09
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 305 FSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              S           GEK + C  C + F RSDHLA+H + H
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTH 44

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 45.5 bits (109), Expect = 5e-06
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERP 293
           ++C    CGK++ +   L  H RTHTG++ 
Sbjct: 162 YKCP--ECGKSFSRRDALNVHQRTHTGKKT 189

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 96.7 bits (242), Expect = 6e-25
 Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 5/80 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           + C    CGK++   S    HM  H G RP+ C    CG++F     L  H + HTG K 
Sbjct: 11  YPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGC--GVCGKKFKMKHHLVGHMKIHTGIKP 65

Query: 324 FGCSICNRRFMRSDHLAKHV 343
           + C+IC +RFM  D   +HV
Sbjct: 66  YECNICAKRFMWRDSFHRHV 85

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 87.9 bits (219), Expect = 1e-21
 Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 6/77 (7%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           + C    CGK +    HL  HM+ HTG +P+ C    C +RF   D    H+   +  K 
Sbjct: 38  YGCG--VCGKKFKMKHHLVGHMKIHTGIKPYECNI--CAKRFMWRDSF--HRHVTSCTKS 91

Query: 324 FGCSICNRRFMRSDHLA 340
           +  +   +    +   +
Sbjct: 92  YEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 83.6 bits (208), Expect = 4e-20
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)

Query: 285 MRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVK 344
               +G++ + CQ   CG+ F+   +  RH   H G + +GC +C ++F    HL  H+K
Sbjct: 2   SSGSSGDKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 58

Query: 345 RHS 347
            H+
Sbjct: 59  IHT 61

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 93.8 bits (234), Expect = 3e-24
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 286 RTHTGERPFLCQWTGCGRRFSRSDELSRHKRT--HTGEKKFGCSICNRRFMRSDHLAKHV 343
            T  GE  + C    C R ++      RH  T      K + C  C + F R D++  HV
Sbjct: 3   FTKEGEHTYRC--KVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

Query: 344 KRHSK 348
           K   K
Sbjct: 61  KIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 78.7 bits (195), Expect = 8e-19
 Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 6/61 (9%)

Query: 262 RIFECNYENCGKNYFKSSHLKAHMRT--HTGERPFLCQWTGCGRRFSRSDELSRHKRTHT 319
             + C    C + Y   S+   H  T      + + C +  C + F+R D ++ H +   
Sbjct: 9   HTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIH 64

Query: 320 G 320
            
Sbjct: 65  K 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 8/36 (22%), Positives = 15/36 (41%)

Query: 315 KRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDG 350
           + T  GE  + C +C+R +    +  +H     K  
Sbjct: 2   EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRN 37

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 91.7 bits (229), Expect = 2e-23
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 278 SSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSD 337
             H   H      ++P+ C    C   F     L+ HK  HTGEK + C+IC  +F R  
Sbjct: 2   GHHHHHHSHMTHSDKPYKCD--RCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPA 59

Query: 338 HLAKHVKRH 346
           +L  H + H
Sbjct: 60  NLKTHTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 81.3 bits (202), Expect = 1e-19
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 4/59 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
           ++C+   C  ++    +L +H   HTGE+P+ C    CG +F+R   L  H R H+GEK
Sbjct: 18  YKCD--RCQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPF 294
           + CN   CG  + + ++LK H R H+GE+P+
Sbjct: 46  YRCN--ICGAQFNRPANLKTHTRIHSGEKPY 74

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 88.7 bits (221), Expect = 3e-22
 Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 277 KSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRS 336
            S             R + C    CG+ FS S +LS+H+RTHTGEK + C  C + F++ 
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQR 59

Query: 337 DHLAKH 342
            HL  H
Sbjct: 60  SHLIGH 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 80.6 bits (200), Expect = 2e-19
 Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 4/59 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
           ++C+   CGK++  SS L  H RTHTGE+P+ C    CG+ F +   L  H R HTG  
Sbjct: 19  YKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCD--ECGKAFIQRSHLIGHHRVHTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 48.6 bits (117), Expect = 5e-08
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 308 SDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
           S    R +      +++ C  C + F  S  L+KH + H
Sbjct: 3   SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 41

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.1 bits (108), Expect = 9e-07
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPF 294
           ++C+   CGK + + SHL  H R HTG  P 
Sbjct: 47  YKCD--ECGKAFIQRSHLIGHHRVHTGSGPS 75

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 85.6 bits (213), Expect = 2e-21
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 5/60 (8%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRH-KRTHTGEK 322
           F C    C + + +  HLK H R+HT E+P+ C    C R F+R D L RH ++ H+G  
Sbjct: 3   FVCE--VCTRAFARQEHLKRHYRSHTNEKPYPC--GLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 76.8 bits (190), Expect = 4e-18
 Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)

Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKR 345
           R F+C    C R F+R + L RH R+HT EK + C +CNR F R D L +H ++
Sbjct: 1   RSFVC--EVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQK 52

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 85.3 bits (212), Expect = 6e-21
 Identities = 14/74 (18%), Positives = 28/74 (37%), Gaps = 8/74 (10%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGE----RPFLCQWTGCGRRFSRSDELSRHKRTHT 319
           + C++  C K + +   L  H + +         F+C  + CG+ F+R + ++RH     
Sbjct: 16  YACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVC--SKCGKTFTRRNTMARHADNCA 71

Query: 320 GEKKFGCSICNRRF 333
           G             
Sbjct: 72  GPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 83.0 bits (206), Expect = 4e-20
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 6/71 (8%)

Query: 280 HLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE----KKFGCSICNRRFMR 335
              +  RTHTGE+P+ C  + C + F +   L  H + +         F CS C + F R
Sbjct: 2   SSGSSGRTHTGEKPYAC--SHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTR 59

Query: 336 SDHLAKHVKRH 346
            + +A+H    
Sbjct: 60  RNTMARHADNC 70

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 82.2 bits (204), Expect = 5e-20
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 4/64 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
            +C+   C  +    + L+ H R H  +RPF C    C     +   LS+H +   G+  
Sbjct: 10  EKCS--ECSYSCSSKAALRIHERIHCTDRPFKC--NYCSFDTKQPSNLSKHMKKFHGDMS 65

Query: 324 FGCS 327
              S
Sbjct: 66  GPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 81.0 bits (201), Expect = 1e-19
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 286 RTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKR 345
            + +   P  C  + C    S    L  H+R H  ++ F C+ C+    +  +L+KH+K+
Sbjct: 2   SSGSSGHPEKC--SECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK 59

Query: 346 H 346
            
Sbjct: 60  F 60

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 81.3 bits (201), Expect = 1e-19
 Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 5/77 (6%)

Query: 288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHT---GEKKFGCSICNRRFMRSDHLAKHVK 344
            +G     C+   CG    +   L+ H+R H       +F C  C +RF + D +A H  
Sbjct: 2   SSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRS 59

Query: 345 RHSKDGAITPSNIGTPS 361
           +      + P     PS
Sbjct: 60  KSHPALLLAPQESSGPS 76

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 73.2 bits (180), Expect = 1e-16
 Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 7/66 (10%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHT---GERPFLCQWTGCGRRFSRSDELSRHKRTHTG 320
            +C    CG    + + L  H R H        F C++  CG+RF + D ++ H+     
Sbjct: 8   LQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHP 63

Query: 321 EKKFGC 326
                 
Sbjct: 64  ALLLAP 69

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 40.5 bits (95), Expect = 5e-05
 Identities = 9/34 (26%), Positives = 12/34 (35%), Gaps = 2/34 (5%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQ 297
           F C +  CGK + K   + AH            Q
Sbjct: 39  FPCEF--CGKRFEKPDSVAAHRSKSHPALLLAPQ 70

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 81.0 bits (201), Expect = 2e-19
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 281 LKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLA 340
                  H+GE+P+ C    CG+ FSRS  L +H+R HTGEK + C  C + F ++  L 
Sbjct: 2   SSGSSGIHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLI 59

Query: 341 KHVKRHS 347
            H + H+
Sbjct: 60  NHQRIHT 66

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 80.2 bits (199), Expect = 2e-19
 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           + C    CGK + +SS L  H R HTGE+P+ C    CG+ FS++  L  H+R HT    
Sbjct: 15  YGCV--ECGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSGPS 70

Query: 324 FG 325
            G
Sbjct: 71  SG 72

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 74.2 bits (183), Expect = 2e-17
 Identities = 24/31 (77%), Positives = 28/31 (90%)

Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
           RPF+C W+ CG+RF+RSDEL RHKRTHTGEK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 47.6 bits (114), Expect = 5e-08
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGER 292
           F C +  CGK + +S  L+ H RTHTGE+
Sbjct: 3   FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 72.2 bits (178), Expect = 1e-16
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + +GERP+ C    CG+ F R   L  H + H  EK  G S
Sbjct: 3   SGSSGSGERPYGC--NECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 9e-10
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           + CN   CGKN+ + SHL  H++ H  E+    
Sbjct: 13  YGCN--ECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
              + +GE+ +GC+ C + F R  HL +H+KRH 
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHF 36

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 71.6 bits (176), Expect = 1e-16
 Identities = 19/33 (57%), Positives = 20/33 (60%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
             R  TG K F C  C+R F RSDHLA H KRH
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 62.0 bits (151), Expect = 4e-13
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTH 318
             R  TG +PF C    C R FSRSD L+ H++ H
Sbjct: 2   STRGSTGIKPFQC--PDCDRSFSRSDHLALHRKRH 34

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 70.1 bits (172), Expect = 5e-16
 Identities = 17/36 (47%), Positives = 26/36 (72%)

Query: 257 NDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGER 292
           +  +++   C+ + CGK Y K+SHL+AH+R HTGER
Sbjct: 2   DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.9 bits (172), Expect = 8e-16
 Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+ + C+   CG+ FSR+  L +H+R H+GEK  G S
Sbjct: 2   SSGSSGTGEKLYNCK--ECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 7e-08
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           + C    CGK++ ++  L  H R H+GE+P   
Sbjct: 13  YNCK--ECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
              + TGEK + C  C + F R+  L KH + HS
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHS 36

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 69.1 bits (170), Expect = 2e-15
 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGER + C  + CG+ F+R   L  H+R HTGEK  G S
Sbjct: 3   SGSSGTGERHYEC--SECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           +EC+   CGK + + S L  H R HTGE+P   
Sbjct: 13  YECS--ECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGE+ + CS C + F R   L  H + H
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.8 bits (169), Expect = 2e-15
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+PF C+   CG  FS S  L +H R+H      G S
Sbjct: 2   SSGSSGTGEKPFQCK--ECGMNFSWSCSLFKHLRSHERTDPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.4 bits (116), Expect = 4e-08
 Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           F+C    CG N+  S  L  H+R+H    P   
Sbjct: 13  FQCK--ECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.3 bits (108), Expect = 4e-07
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
              + TGEK F C  C   F  S  L KH++ H 
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHE 36

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 70.4 bits (172), Expect = 2e-15
 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 7/69 (10%)

Query: 266 CNYENCGKNYFKSSHLKAHM-RTHTGERP---FLCQWTGCGRR---FSRSDELSRHKRTH 318
              ++C + +     L  H+   H G       +C W  C R    F    +L  H R H
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 319 TGEKKFGCS 327
           TGEK    S
Sbjct: 86  TGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 52.7 bits (126), Expect = 4e-09
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 3/44 (6%)

Query: 256 TNDPRRRIFECNYENC---GKNYFKSSHLKAHMRTHTGERPFLC 296
              P +    C +E C   GK++     L  H+R HTGE+    
Sbjct: 50  VGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 51.5 bits (123), Expect = 1e-08
 Identities = 14/72 (19%), Positives = 22/72 (30%), Gaps = 11/72 (15%)

Query: 287 THTGERPFLCQWTGCGRRFSRSDELSRH-KRTHTGEKKF--------GCSICNRRFMRSD 337
               +     +   C R FS   EL  H    H G  +          C    + F    
Sbjct: 19  IDEAQLSRPKK--SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKY 76

Query: 338 HLAKHVKRHSKD 349
            L  H++ H+ +
Sbjct: 77  KLVNHIRVHTGE 88

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 2e-15
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P++C    CG+ F +   L+RH+R HTGEK  G S
Sbjct: 2   SSGSSGTGEKPYIC--NECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 8e-09
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           + CN   CGK++ + SHL  H R HTGE+P   
Sbjct: 13  YICN--ECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TGEK + C+ C + F++  HL +H + H
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 2e-15
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGE+P+ C    CG+ F  S  L++H R HT E   G S
Sbjct: 3   SGSSGTGEKPYSC--NVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 9e-09
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           + CN   CGK +  S+HL  H+R HT E     
Sbjct: 13  YSCN--VCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK + C++C + F+ S HL +H++ H
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.7 bits (169), Expect = 2e-15
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+PF C    CG+ F     L+RH   HT EK  G S
Sbjct: 2   SSGSSGTGEKPFKC--DICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           F+C+   CGK++   S L  H   HT E+P   
Sbjct: 13  FKCD--ICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TGEK F C IC + F     L +H   H
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 2e-15
 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGE P+ C    CG+ FSR  +L  H+RTH GEK  G S
Sbjct: 3   SGSSGTGENPYEC--HECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           +EC+   CGK + +   L +H RTH GE+P   
Sbjct: 13  YECH--ECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGE  + C  C + F R   L  H + H
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   +  GE+P+ C  + CG+ FS    L  H RTH+GEK  G S
Sbjct: 2   SSGSSGAGEKPYGC--SECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 7e-09
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           + C+   CGK +   S+L  HMRTH+GE+P   
Sbjct: 13  YGCS--ECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
               +  GEK +GCS C + F    +L  H++ HS
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHS 36

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TG+RP+ C    CG+ F     L  H+R+HTGEK  G S
Sbjct: 3   SGSSGTGQRPYEC--IECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           +EC    CGK +   S L  H R+HTGE+P   
Sbjct: 13  YECI--ECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 8/34 (23%), Positives = 14/34 (41%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TG++ + C  C + F     L  H + H
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + +GE+PF C+   CG+ F  + +   H+R+H+GEK  G S
Sbjct: 2   SSGSSGSGEKPFKCE--ECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 5/39 (12%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCG 302
           F+C    CGK ++ +S   +H R+H+GE+P        G
Sbjct: 13  FKCE--ECGKGFYTNSQCYSHQRSHSGEKPSGPS---SG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.9 bits (107), Expect = 6e-07
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
              + +GEK F C  C + F  +     H + HS
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHS 36

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+PF C    CG+ FSR   L+ H + HTGEK  G S
Sbjct: 2   SSGSSGTGEKPFKC--VECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           F+C    CGK + + S L  H + HTGE+P   
Sbjct: 13  FKCV--ECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK F C  C + F R   L  H K H
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+PF C    CG+ FS    L++H+R HTGEK  G S
Sbjct: 2   SSGSSGTGEKPFDC--IDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           F+C   +CGK +     L  H R HTGE+P   
Sbjct: 13  FDCI--DCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TGEK F C  C + F     L +H + H
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 68.3 bits (168), Expect = 3e-15
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+PF C  + C + F+    L  H+RTHTGEK  G S
Sbjct: 2   SSGSSGTGEKPFEC--SECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           FEC+   C K +   S+L  H RTHTGE+P   
Sbjct: 13  FECS--ECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 2e-07
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK F CS C + F    +L  H + H
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.9 bits (167), Expect = 3e-15
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE PF+C  + CG+ F+    L  H++ HTGE+  G S
Sbjct: 2   SSGSSGTGENPFIC--SECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           F C+   CGK +   ++L  H + HTGERP   
Sbjct: 13  FICS--ECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 9e-07
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TGE  F CS C + F    +L  H K H
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.9 bits (167), Expect = 4e-15
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + +GE+P+ C    CG+ + R  +L  H+R HTGEK  G S
Sbjct: 2   SSGSSGSGEKPYKC--VECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++C    CGK Y +   L  H R HTGE+    
Sbjct: 13  YKCV--ECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + +GEK + C  C + + R   L  H + H
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.5 bits (166), Expect = 5e-15
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P++C    CG+ F+    L +H++ HT +K  G S
Sbjct: 2   SSGSSGTGEKPYIC--AECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           + C    CGK +   S+L  H + HT ++P   
Sbjct: 13  YICA--ECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TGEK + C+ C + F    +L KH K H
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 67.5 bits (166), Expect = 5e-15
 Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGE+PF C    CG+ FS S +L+ H+R HTGEK  G S
Sbjct: 3   SGSSGTGEKPFECA--ECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           FEC    CGK++  SS L  H R HTGE+P   
Sbjct: 13  FECA--ECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK F C+ C + F  S  LA H + H
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.6 bits (166), Expect = 5e-15
 Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + +GE+P+ C    CG+ FS+   LS H+RTHTGEK  G S
Sbjct: 2   SSGSSGSGEKPYGC--NECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           + CN   CGK + + S L AH RTHTGE+P   
Sbjct: 13  YGCN--ECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + +GEK +GC+ C + F +   L+ H + H
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 67.8 bits (165), Expect = 5e-15
 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 4/60 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           + C  E CG    K S LK H+RTHT  RP+ C    C   F     L++H ++    KK
Sbjct: 2   YIC--EECGIRXKKPSMLKKHIRTHTDVRPYHCT--YCNFSFKTKGNLTKHMKSKAHSKK 57

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 54.7 bits (131), Expect = 2e-10
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 301 CGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
           CG R  +   L +H RTHT  + + C+ CN  F    +L KH+K  +
Sbjct: 7   CGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.5 bits (166), Expect = 5e-15
 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + +GE+P++C    CG+ F  S EL RH+R HTGEK  G S
Sbjct: 3   SGSSGSGEKPYVCD--YCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           + C+Y  CGK +  S+ L  H R HTGE+P   
Sbjct: 13  YVCDY--CGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + +GEK + C  C + F  S  L +H + H
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.2 bits (165), Expect = 8e-15
 Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + +GE+PF C+   CG+RF+++  L  H+R HTGEK  G S
Sbjct: 3   SGSSGSGEKPFQCE--ECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.9 bits (120), Expect = 9e-09
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           F+C    CGK + ++SHL +H R HTGE+P   
Sbjct: 13  FQCE--ECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.2 bits (113), Expect = 9e-08
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + +GEK F C  C +RF ++ HL  H + H
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 67.1 bits (165), Expect = 8e-15
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + + E+P+ C+   CG+ ++R   L  H+R H GEK  G S
Sbjct: 2   SSGSSGSVEKPYKCE--DCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++C   +CGK Y +  +L  H R H GE+    
Sbjct: 13  YKCE--DCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 8/33 (24%), Positives = 15/33 (45%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + + EK + C  C + + R  +L  H + H
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 9e-15
 Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + +GE+PF C+   CG+RF+++ +L  H+R HTGEK  G S
Sbjct: 3   SGSSGSGEKPFKCE--ECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           F+C    CGK + ++S L +H R HTGE+P   
Sbjct: 13  FKCE--ECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 8e-08
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + +GEK F C  C +RF ++  L  H + H
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 66.8 bits (164), Expect = 9e-15
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TG +P+ C  + C + FS   +L  H+R+HTG K  G S
Sbjct: 2   SSGSSGTGVKPYGC--SQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           + C+   C K +   S L  H R+HTG +P   
Sbjct: 13  YGCS--QCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TG K +GCS C + F     L  H + H
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P+ C  + CG+ F +  +L  H+R HTGE   G S
Sbjct: 2   SSGSSGTGEKPYEC--SDCGKSFIKKSQLHVHQRIHTGENPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           +EC+  +CGK++ K S L  H R HTGE P   
Sbjct: 13  YECS--DCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TGEK + CS C + F++   L  H + H
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGERP  C    CG+ F +S  L +H+R HTGEK  G S
Sbjct: 3   SGSSGTGERPHKCN--ECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
            +CN   CGK++ +S+HL  H R HTGE+P   
Sbjct: 13  HKCN--ECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKH 342
               + TGE+   C+ C + F++S HL +H
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQH 31

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGE+P+ C  + CG+ F+R   L  H+++HTGE+  G S
Sbjct: 3   SGSSGTGEKPYKC--SDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++C+  +CGK + + S L  H ++HTGER    
Sbjct: 13  YKCS--DCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK + CS C + F R   L  H + H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P+ C+   C + F++   L++H++THTGEK  G S
Sbjct: 2   SSGSSGTGEKPYECK--VCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 6e-09
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           +EC    C K + + +HL  H +THTGE+P   
Sbjct: 13  YECK--VCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK + C +C++ F +  HLA+H K H
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P  C  T CG+ F    +L  H+RTH  +K  G S
Sbjct: 2   SSGSSGTGEKPCKC--TECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
            +C    CGK +   S L  H RTH  ++    
Sbjct: 13  CKCT--ECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK   C+ C + F     L  H + H
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + +GE+PF C+   CG+ F ++  L+ H R HTGEK  G S
Sbjct: 2   SSGSSGSGEKPFKCK--ECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           F+C    CGK + ++ HL +H+R HTGE+P   
Sbjct: 13  FKCK--ECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + +GEK F C  C + F ++ HLA H++ H
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 1e-14
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TG + F C  T CG+ F+R   LS H++ HTGEK  G S
Sbjct: 2   SSGSSGTGGKHFEC--TECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           FEC    CGK + + S L  H + HTGE+P   
Sbjct: 13  FECT--ECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 312 SRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
                + TG K F C+ C + F R   L+ H K H
Sbjct: 1   GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 1e-14
 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGE+PF C    CG+ +++   L++H+R HTGEK  G S
Sbjct: 3   SGSSGTGEKPFKC--GECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           F+C    CGK+Y +  HL  H R HTGE+P   
Sbjct: 13  FKCG--ECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-07
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK F C  C + + +  HL +H + H
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 1e-14
 Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P+ C    CG+ F+++  L+RH+R HTG K  G S
Sbjct: 2   SSGSSGTGEKPYKCN--ECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++CN   CGK + ++SHL  H R HTG +P   
Sbjct: 13  YKCN--ECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TGEK + C+ C + F ++ HLA+H + H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 66.4 bits (163), Expect = 1e-14
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P+ C+   CG+ F    +L  H   HTGEK  G S
Sbjct: 2   SSGSSGTGEKPYKCE--ECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++C    CGK +     L  H   HTGE+P   
Sbjct: 13  YKCE--ECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TGEK + C  C + F+    L  H   H
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 1e-14
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGERP++C  T CG+ F+    L +H++ HTGEK  G S
Sbjct: 2   SSGSSGTGERPYIC--TVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQ 297
           + C    CGK +   S+L  H + HTGE+P    
Sbjct: 13  YICT--VCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 5e-07
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGE+ + C++C + F    +L KH K H
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 2e-14
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              +  GE+ + C    CG+ FS+S  L  H+R HTGEK  G S
Sbjct: 3   SGSSGMGEKCYKCD--VCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++C+   CGK + +SSHL+ H R HTGE+P   
Sbjct: 13  YKCD--VCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              +  GEK + C +C + F +S HL  H + H
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGER + C  + CG+ F +   LS H+R H GEK  G S
Sbjct: 3   SGSSGTGERHYEC--SECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           +EC+   CGK + + S L  H R H GE+P   
Sbjct: 13  YECS--ECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TGE+ + CS C + F++   L+ H + H
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGE+P+ C+   CG+ FS++  L +H+R HTGEK  G S
Sbjct: 3   SGSSGTGEKPYECK--ECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           +EC    CGK + +++HL  H R HTGE+P   
Sbjct: 13  YECK--ECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK + C  C + F ++ HL +H + H
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + +GE+P+ C  + CG+ F R   L+ H+R HTG +  G S
Sbjct: 3   SGSSGSGEKPYKC--SECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++C+   CGK + + +HL  H R HTG RP   
Sbjct: 13  YKCS--ECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 9e-08
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + +GEK + CS C + F R  HL +H + H
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P+ C    CG+ F+++  L+RH+  HTGEK  G S
Sbjct: 2   SSGSSGTGEKPYKCN--ECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++CN   CGK + ++SHL  H   HTGE+P   
Sbjct: 13  YKCN--ECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TGEK + C+ C + F ++ HLA+H   H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P+ C    CG+ F+++  L RH+  HTGEK  G S
Sbjct: 2   SSGSSGTGEKPYKCN--ECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 3e-08
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++CN   CGK + ++SHL  H   HTGE+P   
Sbjct: 13  YKCN--ECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK + C+ C + F ++ HL +H   H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P+ C    CG+ F R+  L+RH+  HTGEK  G S
Sbjct: 2   SSGSSGTGEKPYKC--HECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 3e-08
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++C+   CGK + ++SHL  H   HTGE+P   
Sbjct: 13  YKCH--ECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 7e-08
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK + C  C + F R+ HLA+H   H
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
               +  GE+P+ C+   CG RF     L  H R HTG  
Sbjct: 1   GSSGSSGGEKPYPCE--ICGTRFRHLQTLKSHLRIHTGSG 38

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPF 294
           + C    CG  +     LK+H+R HTG  P 
Sbjct: 12  YPCEI--CGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              +  GEK + C IC  RF     L  H++ H
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 2e-14
 Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P+ C    CG+ F++   L++H+R HTGEK  G S
Sbjct: 2   SSGSSGTGEKPYRC--GECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 8e-08
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           + C    CGK + + ++L  H R HTGE+P   
Sbjct: 13  YRCG--ECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK + C  C + F +  +L +H + H
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 65.6 bits (161), Expect = 2e-14
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGC 326
           +   + TG +P++C    CG+ F     L  H RTHTGE     
Sbjct: 2   SSGSSGTGMKPYVC--NECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           + CN   CGK +   S+L  H RTHTGE     
Sbjct: 13  YVCN--ECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.4 bits (106), Expect = 8e-07
 Identities = 9/34 (26%), Positives = 15/34 (44%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TG K + C+ C + F    +L  H + H
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 2e-14
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P+ C+   CG+ F    +L  H+R HTGEK  G S
Sbjct: 2   SSGSSGTGEKPYNCE--ECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           + C    CGK +   S L+ H R HTGE+P   
Sbjct: 13  YNCE--ECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 5e-07
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK + C  C + F+    L +H + H
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 65.6 bits (161), Expect = 2e-14
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
              +  GE+P+ C+   CG RF +   L  H   HTG  
Sbjct: 2   SSGSSGGEKPYKCE--TCGARFVQVAHLRAHVLIHTGSG 38

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPF 294
           ++C  E CG  + + +HL+AH+  HTG  P 
Sbjct: 12  YKC--ETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              +  GEK + C  C  RF++  HL  HV  H
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGE+ + C    CG+ FSR+ +LS+H++ HTGEK  G S
Sbjct: 3   SGSSGTGEKRYKCN--ECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 47.5 bits (114), Expect = 7e-08
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++CN   CGK + ++S L  H + HTGE+P   
Sbjct: 13  YKCN--ECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK++ C+ C + F R+  L++H K H
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TG++PF C  T CG+ F     L  H+R HTGEK    S
Sbjct: 2   SSGSSGTGQKPFEC--THCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           FEC   +CGK++    +L  H R HTGE+    
Sbjct: 13  FECT--HCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TG+K F C+ C + F    +L  H + H
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGE+P+ C  + CG+ FS    LS H+R H+G+K  G S
Sbjct: 3   SGSSGTGEKPYEC--SVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 6e-08
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           +EC+   CGK +     L  H R H+G++P   
Sbjct: 13  YECS--VCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
               + TGEK + CS+C + F     L+ H + HS
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHS 36

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              +  GER   C  + CG+ F ++    +H+R HTGEK  G S
Sbjct: 3   SGSSGHGERGHRC--SDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.8 bits (107), Expect = 5e-07
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
             C+  +CGK + ++S+   H R HTGE+P   
Sbjct: 13  HRCS--DCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 8/34 (23%), Positives = 17/34 (50%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               +  GE+   CS C + F+++ +  +H + H
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + +GE+P+ C    CG+ F+++  L+ H R HTGEK  G S
Sbjct: 2   SSGSSGSGEKPYKCN--ECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-08
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++CN   CGK + ++SHL  H R HTGE+P   
Sbjct: 13  YKCN--ECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + +GEK + C+ C + F ++ HL  H + H
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P+ C    CG+ F+    L  H++ HTGEK  G S
Sbjct: 2   SSGSSGTGEKPYRC--AECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 2e-07
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           + C    CGK +   S+L  H + HTGE+P   
Sbjct: 13  YRCA--ECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK + C+ C + F    +L  H K H
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGC 326
           +   + TGE+P+ C    C + F+    L  H+RTHTGE     
Sbjct: 2   SSGSSGTGEKPYEC--NECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.6 bits (122), Expect = 6e-09
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           +ECN   C K +   S+L  H RTHTGE     
Sbjct: 13  YECN--ECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TGEK + C+ C + F    +L  H + H
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P+ C  + CG+ F+    L  H++ HTGE+  G S
Sbjct: 2   SSGSSGTGEKPYKC--SDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 7e-08
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++C+  +CGK++   S L+ H + HTGER    
Sbjct: 13  YKCS--DCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TGEK + CS C + F     L  H K H
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGE+P+ C    CG+ FS++ +L+RH+R HTGEK  G S
Sbjct: 3   SGSSGTGEKPYKCN--ECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++CN   CGK + ++S L  H R HTGE+P   
Sbjct: 13  YKCN--ECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK + C+ C + F ++  LA+H + H
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 3e-14
 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TG++P+ C    CG+ F+++  L+RH+  HTGEK  G S
Sbjct: 2   SSGSSGTGKKPYKCN--ECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++CN   CGK + ++SHL  H   HTGE+P   
Sbjct: 13  YKCN--ECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 5e-07
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TG+K + C+ C + F ++ HLA+H   H
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.3 bits (160), Expect = 3e-14
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   +  GE+P+ C  + CG+ FS S  L++H  THT EK  G S
Sbjct: 2   SSGSSGEGEKPYQC--SECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++C+   CGK++  S  L  H  THT E+P   
Sbjct: 13  YQCS--ECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              +  GEK + CS C + F  S  L +H   H
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 65.3 bits (160), Expect = 3e-14
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P+ C+   CG+ F  +  L +H+R H+GEK  G S
Sbjct: 2   SSGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           + C    CGK++  +S L  H R H+GE+P   
Sbjct: 13  YNCK--ECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
               + TGEK + C  C + F  +  L KH + HS
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHS 36

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 3e-14
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P+ C    C + F     L+ H+R HTGEK  G S
Sbjct: 2   SSGSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 1e-07
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQ 297
           ++C+   C K++   S L  H R HTGE+P    
Sbjct: 13  YKCD--VCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TGEK + C +C++ F     L  H + H
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.3 bits (160), Expect = 3e-14
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGE+P  C+   CG+ FS + +L  H+R HTGE   G S
Sbjct: 3   SGSSGTGEKPHECR--ECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 7e-08
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
            EC    CGK++  +S L  H R HTGE P   
Sbjct: 13  HECR--ECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK   C  C + F  +  L  H + H
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 3e-14
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGE+P+ C    C + FS    L++H+R H+GEK  G S
Sbjct: 3   SGSSGTGEKPYEC--DVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           +EC+   C K +   + L  H R H+GE+P   
Sbjct: 13  YECD--VCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
              + TGEK + C +C + F     L +H + HS
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHS 36

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.3 bits (160), Expect = 4e-14
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGE+P+ C  + CG+ F++  +L  H++ HTGEK  G S
Sbjct: 3   SGSSGTGEKPYEC--SICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           +EC+   CGK++ K S L  H + HTGE+P   
Sbjct: 13  YECS--ICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK + CSIC + F +   L  H + H
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 4e-14
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P+ C+   CG+ ++    L  H++ HTGE+  G S
Sbjct: 2   SSGSSGTGEKPYKCE--KCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 9e-08
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++C    CGK Y    +L  H + HTGERP   
Sbjct: 13  YKCE--KCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TGEK + C  C + +    +L  H K H
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 4e-14
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   +  G++ F C    C + F++S  L+ H+R HTGEK  G S
Sbjct: 2   SSGSSGAGKKLFKC--NECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           F+CN   C K + +SS L  H R HTGE+P   
Sbjct: 13  FKCN--ECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              +  G+K F C+ C + F +S  L  H + H
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 4e-14
 Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TG +P+ C    CG+ FS++ +L+RH+R HTGEK  G S
Sbjct: 2   SSGSSGTGGKPYQCN--ECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++CN   CGK + ++S L  H R HTGE+P   
Sbjct: 13  YQCN--ECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TG K + C+ C + F ++  LA+H + H
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.9 bits (159), Expect = 4e-14
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TG +P++C    CG+ FS    L+ H+  HTGEK  G S
Sbjct: 2   SSGSSGTGVKPYMCN--ECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           + CN   CGK +   S L  H   HTGE+P   
Sbjct: 13  YMCN--ECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 9/34 (26%), Positives = 13/34 (38%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TG K + C+ C + F     L  H   H
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.9 bits (159), Expect = 4e-14
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P+ C    CG+ F  +   ++H+R HTG++  G S
Sbjct: 2   SSGSSGTGEKPYKC--MECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++C    CGK +  +S    H R HTG+RP   
Sbjct: 13  YKCM--ECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TGEK + C  C + F  +    +H + H
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.9 bits (159), Expect = 5e-14
 Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + +G++P+ C+   C + F +   L++HKR HTGE+  G S
Sbjct: 2   SSGSSGSGKKPYECK--ECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           +EC    C K + +  HL  H R HTGER    
Sbjct: 13  YECK--ECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 8e-07
 Identities = 9/35 (25%), Positives = 19/35 (54%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
               + +G+K + C  C + F++  HL +H + H+
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHT 36

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 5e-14
 Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGE+P+ C    CG+ F  +  LSRH+R HTGEK  G S
Sbjct: 3   SGSSGTGEKPYKC--NECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 4e-08
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++CN   CGK +  +S+L  H R HTGE+P   
Sbjct: 13  YKCN--ECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 10/34 (29%), Positives = 19/34 (55%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK + C+ C + F  + +L++H + H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 5e-14
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGE+P+ CQ   CG+ F  S  L +H   H+GE+  G S
Sbjct: 3   SGSSGTGEKPYKCQ--VCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++C    CGK +  SSHL  H   H+GERP   
Sbjct: 13  YKCQ--VCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
               + TGEK + C +C + F  S HL +H   HS
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHS 36

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.9 bits (159), Expect = 5e-14
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + +GERPF C    CG+ F R   L+ H R H+ EK  G S
Sbjct: 3   SGSSGSGERPFKCN--ECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           F+CN   CGK + + SHL  H+R H+ E+    
Sbjct: 13  FKCN--ECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
               + +GE+ F C+ C + F R  HLA H++ HS
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHS 36

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 64.9 bits (159), Expect = 5e-14
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + +  +   C    CGR F+    L++H+R HTGEK  G S
Sbjct: 3   SGSSGSSTKSHQC--HECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
            +C+   CG+ +   SHL  H R HTGE+P   
Sbjct: 13  HQCH--ECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 9/34 (26%), Positives = 13/34 (38%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + +  K   C  C R F    HL +H + H
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.9 bits (159), Expect = 5e-14
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGE+P+ C    CG+ F     L+ H+ TH+GEK  G S
Sbjct: 3   SGSSGTGEKPYKCN--ECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++CN   CGK +   S L  H  TH+GE+P   
Sbjct: 13  YKCN--ECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK + C+ C + F     LA H   H
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 6e-14
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P+ C    CG+ F     L+ H+  HTGEK  G S
Sbjct: 2   SSGSSGTGEKPYKC--NECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++CN   CGK +   S+L  H   HTGE+P   
Sbjct: 13  YKCN--ECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              + TGEK + C+ C + F    +L  H   H
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 6e-14
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   + TGE+P+ C    CG+ F+++  L+ H+R HTG K  G S
Sbjct: 2   SSGSSGTGEKPYKC--NECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++CN   CGK + ++SHL  H R HTG +P   
Sbjct: 13  YKCN--ECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK + C+ C + F ++ HLA H + H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 8e-14
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + TGE+P+ C    CG+ FS    L+ H+  HTG+K  G S
Sbjct: 3   SGSSGTGEKPYEC--NQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           +ECN   CGK +   S L  H   HTG++P   
Sbjct: 13  YECN--QCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + TGEK + C+ C + F     L  H   H
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 64.1 bits (157), Expect = 1e-13
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGC 326
           +   + +GE+P+ C    CG+ F     L  H+RTH G      
Sbjct: 2   SSGSSGSGEKPYEC--NECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.3 bits (116), Expect = 3e-08
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           +ECN   CGK +   S L  H RTH G      
Sbjct: 13  YECN--ECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
               + +GEK + C+ C + F+    L  H + H
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   +  GE+ + C+   C   FS++  L  H+  H GEK  G S
Sbjct: 2   SSGSSGMGEKTWKCR--ECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++C    C   + ++S L+ H   H GE+P   
Sbjct: 13  WKCR--ECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              +  GEK + C  C+  F ++  L  H   H
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 63.7 bits (156), Expect = 1e-13
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKR-THTGEKKFGCS 327
           +   + TG++P+ C    CG+ F ++  L RH R  HTGEK  G S
Sbjct: 2   SSGSSGTGKKPYEC--IECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)

Query: 264 FECNYENCGKNYFKSSHLKAHMR-THTGERPFLC 296
           +EC    CGK + +++ L  H R  HTGE+P   
Sbjct: 13  YECI--ECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKH 342
              + TG+K + C  C + F+++  L +H
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRH 31

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 63.3 bits (155), Expect = 2e-13
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGC 326
           +   + TGE P+ C    CG+ FSR D+L  H++TH+G+     
Sbjct: 2   SSGSSGTGENPYEC--CECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.1 bits (113), Expect = 8e-08
 Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           +EC    CGK + +   L +H +TH+G+     
Sbjct: 13  YECC--ECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
              + TGE  + C  C + F R D L  H K HS
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHS 36

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 63.0 bits (154), Expect = 2e-13
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
               +  GE+P+ C    CG+ FS+   L  H R HTG  
Sbjct: 1   GSSGSSGGEKPYRCD--QCGKAFSQKGSLIVHIRVHTGSG 38

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 47.2 bits (113), Expect = 9e-08
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPF 294
           + C+   CGK + +   L  H+R HTG  P 
Sbjct: 12  YRCD--QCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              +  GEK + C  C + F +   L  H++ H
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 62.6 bits (153), Expect = 3e-13
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
           +   +  G  P+ C    C + FS    L  H+R HT EK  G S
Sbjct: 2   SSGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           ++C+   C K++     L  H R HT E+P   
Sbjct: 13  YKCS--QCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 8/33 (24%), Positives = 12/33 (36%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
              +  G   + CS C + F     L  H + H
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 62.6 bits (153), Expect = 3e-13
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              + +GE+   C    CG+ F     L  H+R H GEK  G S
Sbjct: 3   SGSSGSGEKSHTCD--ECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
             C+   CGKN+   S L+ H R H GE+    
Sbjct: 13  HTCD--ECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 9/34 (26%), Positives = 13/34 (38%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
              + +GEK   C  C + F     L  H + H 
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHM 36

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 62.6 bits (153), Expect = 4e-13
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRH-KRTHTGEKKFGCSICNRRF 333
           +   + +  +P++CQ   CG+ FSR D L+ H K+ HT E+   C +     
Sbjct: 2   SSGSSGSVGKPYICQ--SCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 52.2 bits (126), Expect = 2e-09
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 5/44 (11%)

Query: 264 FECNYENCGKNYFKSSHLKAHM-RTHTGERPFLCQWTGCGRRFS 306
           + C  ++CGK + +  HL  H+ + HT ERP  CQ        S
Sbjct: 13  YIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKCQ--VWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 44.5 bits (106), Expect = 9e-07
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKR-HS 347
              + +  K + C  C + F R DHL  H+K+ H+
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHT 37

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 62.1 bits (152), Expect = 4e-13
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 286 RTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGC 326
              +GE P+ C  + CG+ F+R D+L  H+RTH GE     
Sbjct: 3   SGSSGENPYEC--SECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           +EC+   CGK + +   L +H RTH GE     
Sbjct: 11  YECS--ECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 315 KRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
               +GE  + CS C + F R D L  H + H+
Sbjct: 2   SSGSSGENPYECSECGKAFNRKDQLISHQRTHA 34

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 61.8 bits (151), Expect = 6e-13
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 286 RTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS 327
              +GE+PF C  + C + FS    L  H++TH  EK  G S
Sbjct: 3   SGSSGEKPFGC--SCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           F C+   C K +   S+L  H +TH  E+P   
Sbjct: 11  FGCS--CCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.7 bits (91), Expect = 8e-05
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 315 KRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
               +GEK FGCS C + F    +L  H + H+
Sbjct: 2   SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHA 34

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 60.7 bits (148), Expect = 2e-12
 Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGC 326
              + T  + + C    CG+ F+R   L+RH++ HT +     
Sbjct: 3   SGSSGTDSKSYNCN--ECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.2 bits (113), Expect = 9e-08
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
              + T  K + C+ C + F R  HL +H K H+
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHT 36

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           + CN   CGK + +  HL  H + HT +     
Sbjct: 13  YNCN--ECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 56.9 bits (138), Expect = 3e-11
 Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 286 RTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGC 326
              +GE+P+ C    C   FS ++ L +H++ HT +     
Sbjct: 3   SGSSGEKPYSC--AECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.1 bits (102), Expect = 2e-06
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 315 KRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
               +GEK + C+ C   F  ++ L +H K H+
Sbjct: 2   SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHT 34

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 6/33 (18%), Positives = 13/33 (39%), Gaps = 2/33 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
           + C    C + +  ++ L  H + HT +     
Sbjct: 11  YSCA--ECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 58.2 bits (140), Expect = 7e-11
 Identities = 13/81 (16%), Positives = 23/81 (28%), Gaps = 3/81 (3%)

Query: 277 KSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRS 336
             S  K +    TG   F C+   C   +    EL+ H    TG  +      +    + 
Sbjct: 3   SGSSGKLYGSIFTGASKFRCKD--CSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKR 59

Query: 337 DHLAKHVKRHSKDGAITPSNI 357
               +       +G      +
Sbjct: 60  WSKPRKRSLLEMEGKEDAQKV 80

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 51.7 bits (123), Expect = 1e-08
 Identities = 16/89 (17%), Positives = 24/89 (26%), Gaps = 5/89 (5%)

Query: 262 RIFECNYENCGKNYFKSSHLKAHMRT--HTGERPFLCQWTG-CGRRFSRSDELSRHKRTH 318
             F C  ++C   Y     L  HM    H  +                R   L   +   
Sbjct: 18  SKFRC--KDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKE 75

Query: 319 TGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
             +K   C  C   F     L+ H+ +  
Sbjct: 76  DAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 41.3 bits (96), Expect = 6e-05
 Identities = 9/39 (23%), Positives = 13/39 (33%)

Query: 306 SRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVK 344
           S       +    TG  KF C  C+  +     L  H+ 
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 54.2 bits (131), Expect = 3e-10
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
               +  GE P+LC    CG+ F++   L+ H+R+ +   
Sbjct: 1   GSSGSSGGETPYLCG--QCGKSFTQRGSLAVHQRSCSQSG 38

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 45.0 bits (107), Expect = 5e-07
 Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 2/31 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPF 294
           + C    CGK++ +   L  H R+ +   P 
Sbjct: 12  YLCG--QCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 9/34 (26%), Positives = 14/34 (41%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
              +  GE  + C  C + F +   LA H +  S
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCS 35

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 Length = 33

 Score = 53.4 bits (128), Expect = 4e-10
 Identities = 16/28 (57%), Positives = 19/28 (67%)

Query: 323 KFGCSICNRRFMRSDHLAKHVKRHSKDG 350
           KF C  C +RFMRSDHL+KH+  H   G
Sbjct: 2   KFACPECPKRFMRSDHLSKHITLHELLG 29

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 Length = 33

 Score = 37.2 bits (86), Expect = 2e-04
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 294 FLCQWTGCGRRFSRSDELSRHKRTHTGEKK 323
           F C    C +RF RSD LS+H   H    +
Sbjct: 3   FACP--ECPKRFMRSDHLSKHITLHELLGE 30

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 53.0 bits (128), Expect = 8e-10
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 286 RTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
              +G+R + CQ   CG+ F +   L+ H+R HTG  
Sbjct: 3   SGSSGQRVYECQ--ECGKSFRQKGSLTLHERIHTGSG 37

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 44.1 bits (105), Expect = 9e-07
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPF 294
           +EC    CGK++ +   L  H R HTG  P 
Sbjct: 11  YECQ--ECGKSFRQKGSLTLHERIHTGSGPS 39

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A Length = 29

 Score = 52.2 bits (125), Expect = 1e-09
 Identities = 14/27 (51%), Positives = 16/27 (59%)

Query: 323 KFGCSICNRRFMRSDHLAKHVKRHSKD 349
           KF C  C +RFMRSDHL  H+  H   
Sbjct: 2   KFACPECPKRFMRSDHLTLHILLHENK 28

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A Length = 29

 Score = 36.0 bits (83), Expect = 5e-04
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 294 FLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
           F C    C +RF RSD L+ H   H  +K
Sbjct: 3   FACP--ECPKRFMRSDHLTLHILLHENKK 29

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 53.5 bits (128), Expect = 1e-09
 Identities = 20/80 (25%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 277 KSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRS 336
            S       + H G+R   C  + CG  F R   LSR K          C  C +   + 
Sbjct: 2   SSGSSGKRQKIHLGDRSQKC--SKCGIIFIRRSTLSRRK-------TPMCEKCRKDSCQE 52

Query: 337 DHLAKHVKRHSKDGAITPSN 356
             L K     S      PS+
Sbjct: 53  AALNKDEGNESGKKTSGPSS 72

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 51.5 bits (123), Expect = 3e-09
 Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 286 RTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICN 330
            +    +   C+   CG+ F     L+RHK +H+GEK +     +
Sbjct: 5   SSGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 47.6 bits (113), Expect = 8e-08
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 254 PATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLC 296
             ++   R+   C    CGK +    HL  H  +H+GE+P+  
Sbjct: 3   SGSSGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSS 43

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 36.1 bits (83), Expect = 8e-04
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 316 RTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
            +    K+  C IC + F    HL +H   HS
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHS 36

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 50.6 bits (121), Expect = 5e-09
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
           +   +  GE PF C  + C R F++ + L +H+RTH  + 
Sbjct: 2   SSGSSGAGENPFKC--SKCDRVFTQRNYLVQHERTHARKS 39

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.1 bits (104), Expect = 1e-06
 Identities = 11/35 (31%), Positives = 19/35 (54%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
               +  GE  F CS C+R F + ++L +H + H+
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHA 36

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 50.0 bits (120), Expect = 6e-09
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
           R F+C+   C R F+R + L RH R+HT EK
Sbjct: 1   RSFVCEV--CTRAFARQEHLKRHYRSHTNEK 29

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 42.3 bits (100), Expect = 3e-06
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 322 KKFGCSICNRRFMRSDHLAKHVKRHSKD 349
           + F C +C R F R +HL +H + H+ +
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNE 28

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 39.2 bits (92), Expect = 4e-05
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGER 292
           R F C    C + + +  HLK H R+HT E+
Sbjct: 1   RSFVCEV--CTRAFARQEHLKRHYRSHTNEK 29

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 53.0 bits (126), Expect = 6e-09
 Identities = 17/69 (24%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 278 SSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSD 337
            S     +        F+C    C   FS S  L +H R     K   C +C + F  +D
Sbjct: 59  ESSYLYRLLASKAISQFVCPL--CLMPFSSSVSLKQHIRYTEHTKV--CPVCKKEFTSTD 114

Query: 338 HLAKHVKRH 346
               HV + 
Sbjct: 115 SALDHVCKK 123

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 47.2 bits (111), Expect = 7e-07
 Identities = 14/86 (16%), Positives = 24/86 (27%), Gaps = 2/86 (2%)

Query: 266 CNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSR--HKRTHTGEKK 323
            N++    +       + H  T   +R                DE S            +
Sbjct: 15  SNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQ 74

Query: 324 FGCSICNRRFMRSDHLAKHVKRHSKD 349
           F C +C   F  S  L +H++     
Sbjct: 75  FVCPLCLMPFSSSVSLKQHIRYTEHT 100

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 41.1 bits (95), Expect = 9e-05
 Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 5/51 (9%)

Query: 271 CGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRH-KRTHTG 320
           C   +  S  LK H+R    E   +C    C + F+ +D    H  + H  
Sbjct: 80  CLMPFSSSVSLKQHIRYT--EHTKVCPV--CKKEFTSTDSALDHVCKKHNI 126

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 52.2 bits (124), Expect = 8e-09
 Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 7/103 (6%)

Query: 253 KPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELS 312
             A+    + +++C    C           +H R        +C +  C  RF   +   
Sbjct: 6   SGASPVENKEVYQCRL--CNAKLSSLLEQGSHERLC--RNAAVCPY--CSLRFFSPELKQ 59

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS 355
            H  +    KK  C  C R F  S  + +H         + P+
Sbjct: 60  EH-ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPT 101

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 32

 Score = 46.9 bits (111), Expect = 9e-08
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHT 319
           +RP+ C   GC + F R+ +L RHK++H 
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 47

 Score = 43.3 bits (102), Expect = 2e-06
 Identities = 9/32 (28%), Positives = 20/32 (62%)

Query: 261 RRIFECNYENCGKNYFKSSHLKAHMRTHTGER 292
            + FEC +  C K + +  ++++H++TH  +R
Sbjct: 16  DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 47

 Score = 40.2 bits (94), Expect = 3e-05
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
           ++ F C + GC + F R   +  H +TH  ++
Sbjct: 16  DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic} Length = 32

 Score = 41.2 bits (96), Expect = 9e-06
 Identities = 13/21 (61%), Positives = 16/21 (76%)

Query: 324 FGCSICNRRFMRSDHLAKHVK 344
           F C  C +RFMRSD L+KH+K
Sbjct: 3   FACPACPKRFMRSDALSKHIK 23

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 38

 Score = 39.3 bits (91), Expect = 5e-05
 Identities = 17/35 (48%), Positives = 22/35 (62%)

Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFG 325
           ++PFLC   GCG+RF+  D L+ HK  H    KFG
Sbjct: 4   DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG 38

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 75

 Score = 39.6 bits (92), Expect = 9e-05
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 5/74 (6%)

Query: 278 SSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSD 337
           SS    H  T    R  +CQ   C    S    L  H+  + G +   C  C R  +  D
Sbjct: 2   SSGSSGHEETECPLRLAVCQH--CDLELSILK-LKEHE-DYCGARTELCGNCGRNVLVKD 57

Query: 338 HLAKHVKRHSKDGA 351
            L  H +   ++G+
Sbjct: 58  -LKTHPEVCGREGS 70

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 45

 Score = 38.7 bits (89), Expect = 1e-04
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 318 HTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS 355
            +GEK + C +C  RF R D ++ HV+ H  DG++  S
Sbjct: 5   SSGEKPYSCPVCGLRFKRKDRMSYHVRSH--DGSVGKS 40

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 45

 Score = 36.8 bits (84), Expect = 5e-04
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTG 320
            +GE+P+ C    CG RF R D +S H R+H G
Sbjct: 5   SSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDG 35

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 56/425 (13%), Positives = 128/425 (30%), Gaps = 127/425 (29%)

Query: 36  PFGI------REMKPKQIKDISLKKMLN-----VQDMRKKCVQMNNEETSYNILKS-LKY 83
            F I          P+ +    L+ +         +   +    +N +   + +++ L+ 
Sbjct: 181 DFKIFWLNLKNCNSPETV----LEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRR 236

Query: 84  KMSDRKE----MIF--VESKD-------------TNRDKE---------TSEEAANH--- 112
            +  +      ++   V++               T R K+         T+  + +H   
Sbjct: 237 LLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296

Query: 113 -----ETKN---ACVNTKSTCVPLEASENEAFQANIQMDASTTCADMTSFVPALPRSQNL 164
                E K+     ++ +   +P E       + +I        A+      A     N 
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI-------IAESIRDGLA--TWDNW 347

Query: 165 ------NIAQSISNGFPDMLPNPNPSSPSYGPGPQTVIFTGGSFIPVDKSSPLFIF--DK 216
                  +   I +   ++L  P      +    +  +F   + IP   +  L +   D 
Sbjct: 348 KHVNCDKLTTIIESSL-NVL-EPAEYRKMF---DRLSVFPPSAHIP---TILLSLIWFDV 399

Query: 217 KP--VNSVKSNCPSFLFFAQPPRENK----EIVTSNKIKKSNKPATNDPRRRIFEC---- 266
               V  V +    +    + P+E+      I    K+K  N+ A +   R I +     
Sbjct: 400 IKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH---RSIVDHYNIP 456

Query: 267 ---NYENCGK----NYFKSSHLKAHMRT--HTGE-----RPFL-CQW---------TGCG 302
              + ++        YF  SH+  H++   H          FL  ++         T   
Sbjct: 457 KTFDSDDLIPPYLDQYF-YSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWN 515

Query: 303 RRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSN 362
              S  + L + K      K + C    +     + +   + +  ++   +       ++
Sbjct: 516 ASGSILNTLQQLKFY----KPYICDNDPKYERLVNAILDFLPKIEENLICSKY-----TD 566

Query: 363 VLRNA 367
           +LR A
Sbjct: 567 LLRIA 571

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae} Length = 64

 Score = 37.7 bits (87), Expect = 3e-04
 Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 8/61 (13%)

Query: 266 CNYENCGKNYFKSSHLKAHM-RTHTGER------PFLCQWTGCGRRFSRSDELSRH-KRT 317
           C ++ C ++      L+ H+ + H  +       P  C W  C      +  +  H    
Sbjct: 4   CKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ 63

Query: 318 H 318
           H
Sbjct: 64  H 64

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	384
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.89
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.88
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.88
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.88
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.85
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.84
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.84
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.84
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.83
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.82
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.81
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.8
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.78
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.78
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.78
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.78
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.77
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.75
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.74
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.74
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.74
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.74
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.7
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.7
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.7
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.69
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.68
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.68
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.68
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.66
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.64
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.64
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.64
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.64
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.63
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.63
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.62
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.62
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.62
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.61
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.6
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.59
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.59
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.54
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.53
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.52
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.52
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.51
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.5
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.48
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.47
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.43
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.42
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.42
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.41
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.41
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.4
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.4
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.39
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.38
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.38
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.37
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.36
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.36
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.35
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.35
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.35
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.3
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.28
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.27
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.26
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.24
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.23
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.21
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.18
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.18
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.18
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.17
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.16
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.16
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.16
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.15
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.15
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.14
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.13
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.12
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.11
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.11
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.11
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.1
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.1
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.07
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.03
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.03
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.03
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.01
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.0
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.0
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.0
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.99
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.99
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.99
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.99
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.98
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.98
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.98
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.97
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.97
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.97
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.97
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.97
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.96
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.94
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.92
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.91
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.91
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.91
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.9
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.9
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.89
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.89
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.88
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.88
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.87
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.87
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.85
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.85
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.85
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.85
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.85
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.84
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.83
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.83
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.82
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.81
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.81
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.81
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.79
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.79
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.78
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.78
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.72
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.71
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.71
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.71
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.68
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.67
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.65
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.59
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.55
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.53
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.52
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.51
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.5
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.47
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.45
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.43
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.42
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.4
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.34
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.32
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.29
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.29
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.28
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.25
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.24
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.21
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.2
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.18
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.18
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.17
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.17
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.14
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.12
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.12
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.12
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.11
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.09
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.07
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.05
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.05
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.05
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.03
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.28
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.27
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.01
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.0
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.98
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.96
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.95
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.94
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.92
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.92
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.89
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.87
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.05
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.77
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.72
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.69
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.67
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.65
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.63
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.61
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.57
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.54
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.53
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.47
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.56
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.42
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.55
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.41
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.38
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.33
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.32
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.06
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.89
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.6
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.6
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	93.16
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	92.7
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	91.75
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	91.73
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	82.1
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	81.03

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.89  E-value=1.8e-23  Score=187.34  Aligned_cols=143  Identities=29%  Similarity=0.581  Sum_probs=86.2

Q ss_pred             CCCCCCccccchhhhhccCCCCCCCCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHH
Q psy17740        234 QPPRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSR  313 (384)
Q Consensus       234 qcp~c~k~~~t~~~lk~h~~~~~~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~  313 (384)
                      +|+.|++.|.....|..|...+..   .++|.|..  |++.|.....|..|++.|.++++|.|.+  |++.|.....|..
T Consensus        23 ~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~   95 (190)
T 2i13_A           23 ACPECGKSFSRSDHLAEHQRTHTG---EKPYKCPE--CGKSFSDKKDLTRHQRTHTGEKPYKCPE--CGKSFSQRANLRA   95 (190)
T ss_dssp             --------CCSSHHHHHGGGCC------CCEECTT--TCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHH
T ss_pred             cCCCCccccCCHHHHHHHHHHcCC---CCCccCCC--cCchhCCHHHHHHHHHhcCCCCCccCcc--cCCccCCHHHHHH
Confidence            566677777766666666654332   35566644  6666666666666666666666666644  6666666666666


Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchhhHHHHHHHHhhcCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVAFNMMVTNLPHPVP  383 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~~~hl~~~~~~l~~~~p  383 (384)
                      |++.|+++++|.|.+|++.|.+...|..|+++|+++++|.|..||+.|.....|..|+..|....++.|+
T Consensus        96 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  165 (190)
T 2i13_A           96 HQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP  165 (190)
T ss_dssp             HHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT
T ss_pred             HHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECC
Confidence            6666666666666666666666666666666666666666666666666666666666666555555554

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.88  E-value=1e-23  Score=188.89  Aligned_cols=137  Identities=31%  Similarity=0.614  Sum_probs=126.6

Q ss_pred             CCCCCCccccchhhhhccCCCCCCCCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHH
Q psy17740        234 QPPRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSR  313 (384)
Q Consensus       234 qcp~c~k~~~t~~~lk~h~~~~~~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~  313 (384)
                      +|+.|++.|.....|..|...+..   .++|.|..  |++.|.....|..|++.|.++++|.|.+  |++.|.....|..
T Consensus        51 ~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~  123 (190)
T 2i13_A           51 KCPECGKSFSDKKDLTRHQRTHTG---EKPYKCPE--CGKSFSQRANLRAHQRTHTGEKPYACPE--CGKSFSQLAHLRA  123 (190)
T ss_dssp             ECTTTCCEESSHHHHHHHHHHHHC---CCCEECTT--TCCEESCHHHHHHHHHHHHTCCCEECTT--TCCEESSHHHHHH
T ss_pred             cCCCcCchhCCHHHHHHHHHhcCC---CCCccCcc--cCCccCCHHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHH
Confidence            799999999999999999876543   47899965  9999999999999999999999999965  9999999999999


Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchhhHHHHHHHHhhc
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVAFNMMVTN  377 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~~~hl~~~~~~  377 (384)
                      |++.|+++++|.|.+|++.|.+...|..|+++|+++++|.|..||+.|.....|+.|+..|...
T Consensus       124 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  187 (190)
T 2i13_A          124 HQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGK  187 (190)
T ss_dssp             HHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC---
T ss_pred             HHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCC
Confidence            9999999999999999999999999999999999999999999999999999999999877654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.88  E-value=4.6e-23  Score=170.09  Aligned_cols=115  Identities=43%  Similarity=0.820  Sum_probs=108.3

Q ss_pred             CCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHH
Q psy17740        260 RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHL  339 (384)
Q Consensus       260 ~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L  339 (384)
                      ++++|.|.+++|++.|.....|..|++.|.++++|.|.+..|++.|.....|..|++.|+++++|.|.+|++.|.+...|
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            45789997667999999999999999999999999997447999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCC--CCCCCCccchhhHHHHHHHH
Q psy17740        340 AKHVKRHSKDGAITP--SNIGTPSNVLRNANVAFNMM  374 (384)
Q Consensus       340 ~~H~r~H~~e~~~~c--~~Cg~~~~~~~~~~~hl~~~  374 (384)
                      ..|+++|+++++|.|  ..||+.|.....|..|+..|
T Consensus        83 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           83 KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            999999999999999  89999999999999998754

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=2.4e-23  Score=179.84  Aligned_cols=143  Identities=24%  Similarity=0.412  Sum_probs=129.3

Q ss_pred             cCCCCCCCccccchhhhhccCCCCCCCCCCceeecccCC---CCCcccChhhHHHHHHhhcCCCccccccCCCCCccCCh
Q psy17740        232 FAQPPRENKEIVTSNKIKKSNKPATNDPRRRIFECNYEN---CGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRS  308 (384)
Q Consensus       232 ~~qcp~c~k~~~t~~~lk~h~~~~~~~~~~k~f~C~~e~---Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~  308 (384)
                      ..+|+.|++.|.+...|..|....+.....++|.|.+.+   |++.|.....|.+|++.|.++++|.|.+..|++.|...
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~   82 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRL   82 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSH
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCH
Confidence            357999999999999999998754445566889997533   45999999999999999999999999755799999999


Q ss_pred             HHHHHHHhhhcCCCccccCc--cCcccCChHHHHHHH-HHhcCCCCCCCCC--CCCCccchhhHHHHHHHH
Q psy17740        309 DELSRHKRTHTGEKKFGCSI--CNRRFMRSDHLAKHV-KRHSKDGAITPSN--IGTPSNVLRNANVAFNMM  374 (384)
Q Consensus       309 ~~L~~H~r~Htgekpf~C~~--C~k~F~~~s~L~~H~-r~H~~e~~~~c~~--Cg~~~~~~~~~~~hl~~~  374 (384)
                      ..|..|++.|+++++|.|++  |++.|.+...|..|+ +.|.++++|.|..  ||+.|.....|..|+..|
T Consensus        83 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h  153 (155)
T 2gli_A           83 ENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV  153 (155)
T ss_dssp             HHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             HHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhh
Confidence            99999999999999999998  999999999999999 7899999999998  999999999999998865

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.85  E-value=1e-21  Score=175.94  Aligned_cols=138  Identities=22%  Similarity=0.360  Sum_probs=101.7

Q ss_pred             CCCCccccchhhhhccCCCCCCCCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHH
Q psy17740        236 PRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHK  315 (384)
Q Consensus       236 p~c~k~~~t~~~lk~h~~~~~~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~  315 (384)
                      +.|++.|.....|..|.+.+..   +++|.|.++.|++.|.....|.+|++.|.++++|.|.+..|++.|.....|.+|+
T Consensus        18 ~~C~~~f~~~~~L~~H~~~h~~---~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~   94 (190)
T 1tf6_A           18 ADCGAAYNKNWKLQAHLCKHTG---EKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHF   94 (190)
T ss_dssp             TTTCCBCSSHHHHHHHHHHHHC---CCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHH
T ss_pred             CCCcchhCCHHHHHHHHHhcCC---CCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHH
Confidence            6788888877777777655433   3567774444888888888888888888888888885224888888888888887


Q ss_pred             -hhh-cCCCcccc--CccCcccCChHHHHHHHHHhcCCCCCCCCC--CCCCccchhhHHHHHHHHhh
Q psy17740        316 -RTH-TGEKKFGC--SICNRRFMRSDHLAKHVKRHSKDGAITPSN--IGTPSNVLRNANVAFNMMVT  376 (384)
Q Consensus       316 -r~H-tgekpf~C--~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~--Cg~~~~~~~~~~~hl~~~~~  376 (384)
                       +.| .++++|.|  ..|++.|.+...|..|+++|+++++|.|..  ||+.|.....|..|+..|..
T Consensus        95 ~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A           95 NRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             HTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             HHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence             556 35677888  778888888888888888888888888866  88888887788777765543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.84  E-value=4.3e-21  Score=159.82  Aligned_cols=114  Identities=30%  Similarity=0.547  Sum_probs=103.7

Q ss_pred             CceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc--cCcccCChHH
Q psy17740        261 RRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI--CNRRFMRSDH  338 (384)
Q Consensus       261 ~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~--C~k~F~~~s~  338 (384)
                      .++|.|.++.|++.|.....|..|++.| ++++|.|.+  |++.|.....|..|++.|+++++|.|.+  |++.|.+...
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~   79 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN   79 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTT--TCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHH
Confidence            4689997667999999999999999999 889999965  9999999999999999999999999986  9999999999


Q ss_pred             HHHHHHHhcCCCCCCCC--CCCCCccchhhHHHHHHHHhhc
Q psy17740        339 LAKHVKRHSKDGAITPS--NIGTPSNVLRNANVAFNMMVTN  377 (384)
Q Consensus       339 L~~H~r~H~~e~~~~c~--~Cg~~~~~~~~~~~hl~~~~~~  377 (384)
                      |..|+++|+++++|.|.  .||+.|.....|..|+..|...
T Consensus        80 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~  120 (124)
T 1ubd_C           80 LRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA  120 (124)
T ss_dssp             HHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC--
T ss_pred             HHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHccc
Confidence            99999999999999995  5999999999999999988653

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.84  E-value=1.7e-21  Score=167.19  Aligned_cols=102  Identities=21%  Similarity=0.509  Sum_probs=93.9

Q ss_pred             CCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHH
Q psy17740        259 PRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDH  338 (384)
Q Consensus       259 ~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~  338 (384)
                      .++++|.|..  ||+.|.....|.+|+++|.++++|.|.+  |++.|.....|..|+++|+|+++|.|++|++.|.+...
T Consensus        18 ~Gek~y~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~   93 (133)
T 2lt7_A           18 DGRVYYICIV--CKRSYVCLTSLRRHFNIHSWEKKYPCRY--CEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQF   93 (133)
T ss_dssp             TTEEEEEETT--TCCEESCHHHHHHHHHHHHCCSCEECSS--SSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHH
T ss_pred             CCCcCeECCC--CCCCcCCHHHHHHHHHHcCCCCCeeCCc--cCeecccccchhhhccccCCCccccCCCCCCCcCCHHH
Confidence            4678999965  9999999999999999999999999965  99999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCC------CCCCCCCCCCccch
Q psy17740        339 LAKHVKRHSKDG------AITPSNIGTPSNVL  364 (384)
Q Consensus       339 L~~H~r~H~~e~------~~~c~~Cg~~~~~~  364 (384)
                      |..|+++|++++      .|.|..|++.|...
T Consensus        94 L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           94 MSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            999999998764      57899999877643

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=6.5e-21  Score=158.03  Aligned_cols=110  Identities=28%  Similarity=0.512  Sum_probs=103.5

Q ss_pred             CCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhh---hcCCCccccCccCcccCCh
Q psy17740        260 RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRT---HTGEKKFGCSICNRRFMRS  336 (384)
Q Consensus       260 ~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~---Htgekpf~C~~C~k~F~~~  336 (384)
                      +.++|.|..  |++.|.....|.+|++.|.++++|.|.+  |++.|.....|.+|++.   |.++++|.|.+|++.|.+.
T Consensus         4 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~   79 (124)
T 2dlq_A            4 GSSGVECPT--CHKKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRR   79 (124)
T ss_dssp             CCSSCCCTT--TCCCCSSHHHHHHHHHHHSSCCSCBCTT--TCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSH
T ss_pred             CCCCCCCCC--CCCcCCCHHHHHHHHHhCCCCCCeECCC--CCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCH
Confidence            457899965  9999999999999999999999999966  99999999999999985   5788999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCCCCccchhhHHHHHHH
Q psy17740        337 DHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVAFNM  373 (384)
Q Consensus       337 s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~~~hl~~  373 (384)
                      ..|..|+++|+++++|.|..|++.|.....|..|+..
T Consensus        80 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  116 (124)
T 2dlq_A           80 MELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK  116 (124)
T ss_dssp             HHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999874

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.83  E-value=9e-21  Score=169.68  Aligned_cols=135  Identities=19%  Similarity=0.403  Sum_probs=121.0

Q ss_pred             CC--CCCCccccchhhhhccCCCCCCCCCCceeecccCCCCCcccChhhHHHHH-Hhh-cCCCccccccCCCCCccCChH
Q psy17740        234 QP--PRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHM-RTH-TGERPFLCQWTGCGRRFSRSD  309 (384)
Q Consensus       234 qc--p~c~k~~~t~~~lk~h~~~~~~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~-r~H-~~ekp~~C~~~~Cgk~F~~~~  309 (384)
                      .|  +.|++.|.....|..|.+.+..   +++|.|.++.|++.|.....|.+|+ +.| .++++|.|.+..|++.|....
T Consensus        44 ~C~~~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~  120 (190)
T 1tf6_A           44 PCKEEGCEKGFTSLHHLTRHSLTHTG---EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHN  120 (190)
T ss_dssp             CCSSTTCCCCCSSHHHHHHHHTTTTT---CCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHH
T ss_pred             cCCCCCCChhhCCHHHHHHHHHHccC---CCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHH
Confidence            57  8899999999999999876554   4789997446999999999999999 567 478899994334999999999


Q ss_pred             HHHHHHhhhcCCCccccCc--cCcccCChHHHHHHHHHhcCCCCCCCCC---CCCCccchhhHHHHHHHH
Q psy17740        310 ELSRHKRTHTGEKKFGCSI--CNRRFMRSDHLAKHVKRHSKDGAITPSN---IGTPSNVLRNANVAFNMM  374 (384)
Q Consensus       310 ~L~~H~r~Htgekpf~C~~--C~k~F~~~s~L~~H~r~H~~e~~~~c~~---Cg~~~~~~~~~~~hl~~~  374 (384)
                      .|..|++.|+++++|.|++  |++.|.+...|.+|+++|++   |.|..   |++.|.....|..|+..|
T Consensus       121 ~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h  187 (190)
T 1tf6_A          121 QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAEC  187 (190)
T ss_dssp             HHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTC
T ss_pred             HHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccHHHHHHHHHhh
Confidence            9999999999999999988  99999999999999999988   88999   999999999999998765

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.82  E-value=2.6e-20  Score=161.14  Aligned_cols=119  Identities=35%  Similarity=0.622  Sum_probs=61.1

Q ss_pred             CCCCCCccccchhhhhccCCCCCCCCCC------ceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCC
Q psy17740        234 QPPRENKEIVTSNKIKKSNKPATNDPRR------RIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSR  307 (384)
Q Consensus       234 qcp~c~k~~~t~~~lk~h~~~~~~~~~~------k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~  307 (384)
                      .|..|++.|.....|..|.+..+.....      ..|.|..  |++.|.....|..|++.|+++++|.|.+.+|++.|..
T Consensus        27 ~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  104 (155)
T 2rpc_A           27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR  104 (155)
T ss_dssp             SCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTT--SSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESC
T ss_pred             ccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCC--cccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCC
Confidence            4555555555555555554432221111      1144532  5555555555555555555555555533335555555


Q ss_pred             hHHHHHHHhhhcCCCccccCc--cCcccCChHHHHHHHHHhcCCCCCCC
Q psy17740        308 SDELSRHKRTHTGEKKFGCSI--CNRRFMRSDHLAKHVKRHSKDGAITP  354 (384)
Q Consensus       308 ~~~L~~H~r~Htgekpf~C~~--C~k~F~~~s~L~~H~r~H~~e~~~~c  354 (384)
                      ...|.+|++.|+++++|.|.+  |++.|.+...|.+|+++|+++++|.|
T Consensus       105 ~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c  153 (155)
T 2rpc_A          105 SENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS  153 (155)
T ss_dssp             HHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCS
T ss_pred             HHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCC
Confidence            555555555555555555554  55555555555555555555555554

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.81  E-value=4.8e-20  Score=159.47  Aligned_cols=121  Identities=21%  Similarity=0.366  Sum_probs=110.6

Q ss_pred             CCCceeecccCCCCCcccChhhHHHHHHh-hcCCCc--------cccccCCCCCccCChHHHHHHHhhhcCCCccccCc-
Q psy17740        259 PRRRIFECNYENCGKNYFKSSHLKAHMRT-HTGERP--------FLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI-  328 (384)
Q Consensus       259 ~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~-H~~ekp--------~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~-  328 (384)
                      .....|.|..  |++.|.....|.+|++. |.+..+        |.|.+  |++.|.....|..|++.|+++++|.|.+ 
T Consensus        21 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~   96 (155)
T 2rpc_A           21 EAQLSRPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKPFPCPFP   96 (155)
T ss_dssp             TTCCSSSCCC--CCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTT--SSCCCSSHHHHHHHTHHHHCCCSEECSCT
T ss_pred             hhhccccccc--CCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCC--cccccCCHHHHHHHHHhcCCCCcccCCcC
Confidence            3456789955  99999999999999998 777655        88965  9999999999999999999999999998 


Q ss_pred             -cCcccCChHHHHHHHHHhcCCCCCCCCC--CCCCccchhhHHHHHHHHhhcCCCCCC
Q psy17740        329 -CNRRFMRSDHLAKHVKRHSKDGAITPSN--IGTPSNVLRNANVAFNMMVTNLPHPVP  383 (384)
Q Consensus       329 -C~k~F~~~s~L~~H~r~H~~e~~~~c~~--Cg~~~~~~~~~~~hl~~~~~~l~~~~p  383 (384)
                       |++.|.+...|.+|+++|+++++|.|..  |++.|.....|..|+..|....+++|.
T Consensus        97 ~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           97 GCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             TTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence             9999999999999999999999999997  999999999999999988887888775

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.80  E-value=3.9e-20  Score=153.99  Aligned_cols=113  Identities=36%  Similarity=0.697  Sum_probs=100.0

Q ss_pred             CCC--CCCccccchhhhhccCCCCCCCCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHH
Q psy17740        234 QPP--RENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDEL  311 (384)
Q Consensus       234 qcp--~c~k~~~t~~~lk~h~~~~~~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L  311 (384)
                      .|+  .|++.|.....|..|.+.+    ..++|.|..  |++.|.....|..|++.|.++++|.|.+..|++.|.....|
T Consensus         7 ~C~~~~C~~~f~~~~~l~~H~~~h----~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            7 ACPHKGCTKMFRDNSAMRKHLHTH----GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG----SCCCEECTT--TCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             cCCCCCCcCccCCHHHHHHHHHHc----CCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            576  8999999999999998765    457899965  99999999999999999999999999755799999999999


Q ss_pred             HHHHhhhcCCCccccC--ccCcccCChHHHHHHHHHhcCCCCC
Q psy17740        312 SRHKRTHTGEKKFGCS--ICNRRFMRSDHLAKHVKRHSKDGAI  352 (384)
Q Consensus       312 ~~H~r~Htgekpf~C~--~C~k~F~~~s~L~~H~r~H~~e~~~  352 (384)
                      .+|++.|+++++|.|+  .|++.|.+...|..|+++|++++++
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            9999999999999996  5999999999999999999998765

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.78  E-value=2e-19  Score=141.07  Aligned_cols=88  Identities=48%  Similarity=0.941  Sum_probs=81.7

Q ss_pred             CceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHH
Q psy17740        261 RRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLA  340 (384)
Q Consensus       261 ~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~  340 (384)
                      +++|.|.++.|++.|.....|.+|++.|.++++|.|.+  |++.|.....|..|++.|+++++|.|.+|++.|.+...|.
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   79 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK   79 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCC--CCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHH
Confidence            46899976679999999999999999999999999965  9999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCC
Q psy17740        341 KHVKRHSKDG  350 (384)
Q Consensus       341 ~H~r~H~~e~  350 (384)
                      .|+++|++++
T Consensus        80 ~H~~~H~~~k   89 (90)
T 1a1h_A           80 RHTKIHLRQK   89 (90)
T ss_dssp             HHHGGGGC--
T ss_pred             HHHHHhcccC
Confidence            9999999875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=2.4e-19  Score=154.64  Aligned_cols=119  Identities=22%  Similarity=0.458  Sum_probs=107.6

Q ss_pred             eeecccCCCCCcccChhhHHHHHH---hhcCCCccccccCCC---CCccCChHHHHHHHhhhcCCCccccCc--cCcccC
Q psy17740        263 IFECNYENCGKNYFKSSHLKAHMR---THTGERPFLCQWTGC---GRRFSRSDELSRHKRTHTGEKKFGCSI--CNRRFM  334 (384)
Q Consensus       263 ~f~C~~e~Cgk~F~~~s~L~~H~r---~H~~ekp~~C~~~~C---gk~F~~~~~L~~H~r~Htgekpf~C~~--C~k~F~  334 (384)
                      .|.|  +.|++.|.....|..|++   .|.++++|.|.+.+|   ++.|.....|.+|++.|+++++|.|.+  |++.|.
T Consensus         3 ~~~C--~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   80 (155)
T 2gli_A            3 DCRW--DGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYS   80 (155)
T ss_dssp             BCCB--TTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCS
T ss_pred             cCCc--CCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCccc
Confidence            4566  669999999999999998   688999999976444   599999999999999999999999985  999999


Q ss_pred             ChHHHHHHHHHhcCCCCCCCCC--CCCCccchhhHHHHH-HHHhhcCCCCCC
Q psy17740        335 RSDHLAKHVKRHSKDGAITPSN--IGTPSNVLRNANVAF-NMMVTNLPHPVP  383 (384)
Q Consensus       335 ~~s~L~~H~r~H~~e~~~~c~~--Cg~~~~~~~~~~~hl-~~~~~~l~~~~p  383 (384)
                      +...|..|+++|+++++|.|..  ||+.|.....|..|+ ..|....++.|+
T Consensus        81 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  132 (155)
T 2gli_A           81 RLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCK  132 (155)
T ss_dssp             SHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECC
T ss_pred             CHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            9999999999999999999998  999999999999998 677776777775

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.78  E-value=1.2e-18  Score=141.22  Aligned_cols=92  Identities=38%  Similarity=0.754  Sum_probs=86.7

Q ss_pred             CCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHH
Q psy17740        259 PRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDH  338 (384)
Q Consensus       259 ~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~  338 (384)
                      ..+++|.|..  |++.|.....|.+|++.|.++++|.|.+  |++.|.....|.+|++.|+++++|.|.+|++.|.+...
T Consensus        13 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   88 (106)
T 2ee8_A           13 KTKKEFICKF--CGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRT   88 (106)
T ss_dssp             CCCCCCBCSS--SCCBCSSHHHHHHHHHHHCCSCCCBCSS--SCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHH
T ss_pred             CCCcCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCCC--ccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHH
Confidence            3457899965  9999999999999999999999999966  99999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCC
Q psy17740        339 LAKHVKRHSKDGAITP  354 (384)
Q Consensus       339 L~~H~r~H~~e~~~~c  354 (384)
                      |..|+++|+++++|.+
T Consensus        89 L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           89 LAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHHHHTTSCCCCCC
T ss_pred             HHHHHHHhCCCCCCcC
Confidence            9999999999998865

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.78  E-value=1e-18  Score=139.71  Aligned_cols=91  Identities=63%  Similarity=1.156  Sum_probs=85.0

Q ss_pred             CCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChH
Q psy17740        258 DPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSD  337 (384)
Q Consensus       258 ~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s  337 (384)
                      ....+.|.|.+++|++.|.....|..|++.|.++++|.|.+..|++.|.....|.+|++.|+++++|.|.+|++.|.+..
T Consensus        10 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   89 (100)
T 2ebt_A           10 LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSD   89 (100)
T ss_dssp             CCSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHH
T ss_pred             cccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHH
Confidence            34567899987789999999999999999999999999975579999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcC
Q psy17740        338 HLAKHVKRHSK  348 (384)
Q Consensus       338 ~L~~H~r~H~~  348 (384)
                      .|..|+++|++
T Consensus        90 ~l~~H~~~H~~  100 (100)
T 2ebt_A           90 HLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhCC
Confidence            99999999974

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.77  E-value=2.4e-19  Score=147.65  Aligned_cols=108  Identities=39%  Similarity=0.799  Sum_probs=99.0

Q ss_pred             CCCC--CCccccchhhhhccCCCCCCCCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHH
Q psy17740        234 QPPR--ENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDEL  311 (384)
Q Consensus       234 qcp~--c~k~~~t~~~lk~h~~~~~~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L  311 (384)
                      .|+.  |++.|.....|..|.+.+..   .++|.|.++.|++.|.....|..|++.|.++++|.|.+  |++.|.....|
T Consensus         8 ~C~~~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l   82 (119)
T 2jp9_A            8 MCAYPGCNKRYFKLSHLQMHSRKHTG---EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT--CQRKFSRSDHL   82 (119)
T ss_dssp             CCCSTTSCCCBSCHHHHHHHHHHHHT---TCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHH
T ss_pred             eCCCCCCcchhCCHHHHHHHHHhhCC---CCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCc--cCchhCCHHHH
Confidence            5775  99999999999999875543   47899975579999999999999999999999999965  99999999999


Q ss_pred             HHHHhhhcCCCcccc--CccCcccCChHHHHHHHHHh
Q psy17740        312 SRHKRTHTGEKKFGC--SICNRRFMRSDHLAKHVKRH  346 (384)
Q Consensus       312 ~~H~r~Htgekpf~C--~~C~k~F~~~s~L~~H~r~H  346 (384)
                      .+|++.|+++++|.|  +.|++.|.+...|.+|+++|
T Consensus        83 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           83 KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            999999999999999  89999999999999999987

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=2e-18  Score=137.13  Aligned_cols=90  Identities=33%  Similarity=0.676  Sum_probs=84.2

Q ss_pred             CCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHH
Q psy17740        259 PRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDH  338 (384)
Q Consensus       259 ~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~  338 (384)
                      ...++|.|..  |++.|.....|..|++.|.++++|.|.+  |++.|.....|.+|++.|+++++|.|.+|++.|.+...
T Consensus         4 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   79 (96)
T 2dmd_A            4 GSSGPHKCEV--CGKCFSRKDKLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQ   79 (96)
T ss_dssp             CCCCCCCBTT--TTBCCCCHHHHHHHGGGCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHH
T ss_pred             CCCcCeECCC--CCCccCCHHHHHHHHHhcCCCCCEeCCC--CCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHH
Confidence            3457899965  9999999999999999999999999965  99999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCC
Q psy17740        339 LAKHVKRHSKDGAI  352 (384)
Q Consensus       339 L~~H~r~H~~e~~~  352 (384)
                      |..|+++|++++..
T Consensus        80 l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           80 LTVHLRSHTGDSGP   93 (96)
T ss_dssp             HHHHHTTCCSCCCC
T ss_pred             HHHHHHHhcCCCCC
Confidence            99999999998754

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=1.9e-18  Score=143.05  Aligned_cols=110  Identities=34%  Similarity=0.646  Sum_probs=99.0

Q ss_pred             CCCCCCCccccchhhhhccCCCCCCCCCCceeecccCCCCCcccChhhHHHHHHh---hcCCCccccccCCCCCccCChH
Q psy17740        233 AQPPRENKEIVTSNKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRT---HTGERPFLCQWTGCGRRFSRSD  309 (384)
Q Consensus       233 ~qcp~c~k~~~t~~~lk~h~~~~~~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~---H~~ekp~~C~~~~Cgk~F~~~~  309 (384)
                      .+|+.|++.|.....|..|.+.+..   +++|.|..  |++.|.....|.+|++.   |.++++|.|.+  |++.|....
T Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~~~~   80 (124)
T 2dlq_A            8 VECPTCHKKFLSKYYLKVHNRKHTG---EKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTCSV--CQETFRRRM   80 (124)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHHHHSS---CCSCBCTT--TCCBCSSHHHHHHHHHHCCCCSCCCCEECSS--SCCEESSHH
T ss_pred             CCCCCCCCcCCCHHHHHHHHHhCCC---CCCeECCC--CCchhcCHHHHHHHHhhhhcCCCCCCeECCC--CCCccCCHH
Confidence            3799999999999999999875543   47899965  99999999999999996   57889999966  999999999


Q ss_pred             HHHHHHhhhcCCCccccCccCcccCChHHHHHHHHH-hcCC
Q psy17740        310 ELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKR-HSKD  349 (384)
Q Consensus       310 ~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~-H~~e  349 (384)
                      .|.+|++.|+++++|.|.+|++.|.+...|.+|++. |.++
T Consensus        81 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           81 ELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            999999999999999999999999999999999985 5554

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.74  E-value=4.9e-19  Score=151.82  Aligned_cols=94  Identities=19%  Similarity=0.271  Sum_probs=87.9

Q ss_pred             HHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCC
Q psy17740        281 LKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTP  360 (384)
Q Consensus       281 L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~  360 (384)
                      +..|.++|.|+++|.|.+  |++.|.....|.+|+++|+++++|.|.+|++.|.+...|..|+++|+++++|.|..||+.
T Consensus        10 ~~h~~~~h~Gek~y~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~   87 (133)
T 2lt7_A           10 DDHYELIVDGRVYYICIV--CKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKS   87 (133)
T ss_dssp             SSEEEEEETTEEEEEETT--TCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCE
T ss_pred             HhhceeecCCCcCeECCC--CCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCC
Confidence            344566799999999965  999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccchhhHHHHHHHHhh
Q psy17740        361 SNVLRNANVAFNMMVT  376 (384)
Q Consensus       361 ~~~~~~~~~hl~~~~~  376 (384)
                      |.....|..|+..|-.
T Consensus        88 F~~~~~L~~H~~~hh~  103 (133)
T 2lt7_A           88 FINYQFMSSHIKSVHS  103 (133)
T ss_dssp             ESSHHHHHHHHHHHTC
T ss_pred             cCCHHHHHHHhHHhcC
Confidence            9999999999988754

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.74  E-value=3.5e-18  Score=131.48  Aligned_cols=82  Identities=38%  Similarity=0.922  Sum_probs=77.3

Q ss_pred             eeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHH
Q psy17740        263 IFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKH  342 (384)
Q Consensus       263 ~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H  342 (384)
                      +|.|..  |++.|.....|..|++.|.++++|.|.+  |++.|.....|.+|++.|+++++|.|.+|++.|.+...|..|
T Consensus         1 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   76 (82)
T 2kmk_A            1 SFDCKI--CGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITH   76 (82)
T ss_dssp             CEECSS--SCCEESSHHHHHHHHHHHHTCCCEECSS--SCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHH
T ss_pred             CccCCC--CcccccCchhHHHHHHHcCCCCCeeCCc--CChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHH
Confidence            488955  9999999999999999999999999965  999999999999999999999999999999999999999999


Q ss_pred             HHHhcC
Q psy17740        343 VKRHSK  348 (384)
Q Consensus       343 ~r~H~~  348 (384)
                      +++|+|
T Consensus        77 ~~~H~g   82 (82)
T 2kmk_A           77 SRKHTG   82 (82)
T ss_dssp             HHHHC-
T ss_pred             HHhhCC
Confidence            999975

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.74  E-value=2.7e-18  Score=134.32  Aligned_cols=87  Identities=61%  Similarity=1.190  Sum_probs=81.6

Q ss_pred             CceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHH
Q psy17740        261 RRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLA  340 (384)
Q Consensus       261 ~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~  340 (384)
                      .+.|.|.+++|++.|.....|..|++.|.++++|.|.+..|++.|.....|.+|++.|+++++|.|.+|++.|.....|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            46799987789999999999999999999999999975579999999999999999999999999999999999999999


Q ss_pred             HHHHHhc
Q psy17740        341 KHVKRHS  347 (384)
Q Consensus       341 ~H~r~H~  347 (384)
                      .|+++|.
T Consensus        83 ~H~~~H~   89 (89)
T 2wbs_A           83 LHMKRHF   89 (89)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhhC
Confidence            9999883

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=3.7e-17  Score=129.49  Aligned_cols=86  Identities=41%  Similarity=0.811  Sum_probs=79.3

Q ss_pred             CCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCC--CccccCccCcccCChH
Q psy17740        260 RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE--KKFGCSICNRRFMRSD  337 (384)
Q Consensus       260 ~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htge--kpf~C~~C~k~F~~~s  337 (384)
                      ++++|.|..  |++.|.....|.+|++.|.++++|.|.+  |++.|.....|.+|++.|+++  ++|.|.+|++.|.+..
T Consensus         4 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~   79 (95)
T 2yt9_A            4 GSSGVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPD   79 (95)
T ss_dssp             CCSCEECSS--SCCEESSSHHHHHHHHHSCSSCSEECSS--SCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHH
T ss_pred             CCCCeECCC--CCCccCChHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHH
Confidence            457899965  9999999999999999999999999965  999999999999999999997  8999999999999999


Q ss_pred             HHHHHHH-HhcCC
Q psy17740        338 HLAKHVK-RHSKD  349 (384)
Q Consensus       338 ~L~~H~r-~H~~e  349 (384)
                      .|..|++ .|.++
T Consensus        80 ~L~~H~~~~H~~~   92 (95)
T 2yt9_A           80 HLNGHIKQVHSGP   92 (95)
T ss_dssp             HHHHHHHHTSCCC
T ss_pred             HHHHHHHHhcCCC
Confidence            9999996 67654

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=2.5e-17  Score=134.02  Aligned_cols=90  Identities=21%  Similarity=0.432  Sum_probs=82.5

Q ss_pred             CCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHH
Q psy17740        259 PRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDH  338 (384)
Q Consensus       259 ~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~  338 (384)
                      ..+++|.|..  |++.|.....|..|++.|.  ++|.|.+  |++.|.....|.+|++ |+++++|.|.+|++.|.+...
T Consensus        12 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~--~~~~C~~--C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~   84 (107)
T 1wjp_A           12 ENKEVYQCRL--CNAKLSSLLEQGSHERLCR--NAAVCPY--CSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFS   84 (107)
T ss_dssp             CCCCCCBCTT--TCCBCSSHHHHHHHHHHHH--HSBCCTT--TCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHH
T ss_pred             CCCcCeECCC--CCCccCCHHHHHHHHHHCC--CCccCCC--CCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHH
Confidence            4567899965  9999999999999999994  7899966  9999999999999996 999999999999999999999


Q ss_pred             HHHHHH-HhcCCCCCCCC
Q psy17740        339 LAKHVK-RHSKDGAITPS  355 (384)
Q Consensus       339 L~~H~r-~H~~e~~~~c~  355 (384)
                      |.+|++ .|.++++|.+.
T Consensus        85 L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           85 IWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHHcCCCCCCCCC
Confidence            999997 89999988764

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=9.5e-19  Score=144.00  Aligned_cols=103  Identities=18%  Similarity=0.276  Sum_probs=84.4

Q ss_pred             hhhhccCCCCCCCCCCceeecccCCCCCcccChhhHHHHHHh--hcCCCccc-cccCCCCCcc--CChHHHHHHHhhhcC
Q psy17740        246 NKIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRT--HTGERPFL-CQWTGCGRRF--SRSDELSRHKRTHTG  320 (384)
Q Consensus       246 ~~lk~h~~~~~~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~--H~~ekp~~-C~~~~Cgk~F--~~~~~L~~H~r~Htg  320 (384)
                      ..|..|.+.+.   .+++|.|..  |++.|.....|..|++.  |.+.+++. |.+  |++.|  .....|.+|++.|++
T Consensus         5 ~~l~~H~~~H~---~~~~~~C~~--C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~--C~~~f~f~~~~~l~~H~~~H~~   77 (115)
T 2dmi_A            5 SSGKLYGSIFT---GASKFRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETDNN--NPKRWSKPRKRSLLEMEGKEDA   77 (115)
T ss_dssp             CCCCCCCCCCC---CCCSEEBSS--SSCEESSHHHHHHHHHHTCCCBCSCCCCCCC--CCSCCSSCCCCCCCCCCCSCCC
T ss_pred             hhhhhheeeeC---CCCCEECCc--cCchhcCHHHHHHHHHHhCccccCCCccCCC--CCcccccccHHHHHHHhhccCC
Confidence            34556665443   457899955  99999999999999998  77777655 855  99988  899999999999999


Q ss_pred             CCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        321 EKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       321 ekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      +++|.|.+|++.|.+...|.+|+++|+........
T Consensus        78 ~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           78 QKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             CSSCBCSSSCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             CcceECCCCCCccCCHHHHHHHHHHhCCcccCCCC
Confidence            99999999999999999999999998876655443

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=4.6e-17  Score=132.79  Aligned_cols=87  Identities=36%  Similarity=0.801  Sum_probs=81.0

Q ss_pred             CCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChH
Q psy17740        258 DPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSD  337 (384)
Q Consensus       258 ~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s  337 (384)
                      ..++++|.| .  |++.|.....|.+|++.|.++++|.|.+  |++.|.....|.+|++.|+++++|.|.+|++.|.+..
T Consensus         5 h~~~k~~~C-~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   79 (110)
T 2csh_A            5 SSGDKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRD   79 (110)
T ss_dssp             CCCCCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHH
T ss_pred             CCCCCCEec-c--CCCccCCHHHHHHHHHHcCCCcCccCCC--CCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHH
Confidence            345688999 6  9999999999999999999999999966  9999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCC
Q psy17740        338 HLAKHVKRHSKD  349 (384)
Q Consensus       338 ~L~~H~r~H~~e  349 (384)
                      .|.+|++.|+..
T Consensus        80 ~l~~H~~~~~~~   91 (110)
T 2csh_A           80 SFHRHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHcccc
Confidence            999999998753

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.68  E-value=9.4e-17  Score=129.90  Aligned_cols=94  Identities=31%  Similarity=0.581  Sum_probs=87.6

Q ss_pred             hcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchhhH
Q psy17740        288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNA  367 (384)
Q Consensus       288 H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~  367 (384)
                      ...+++|.|.+  |++.|.....|.+|++.|+++++|.|.+|++.|.+...|..|+++|+++++|.|..|++.|.....|
T Consensus        12 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L   89 (106)
T 2ee8_A           12 SKTKKEFICKF--CGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTL   89 (106)
T ss_dssp             CCCCCCCBCSS--SCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHH
T ss_pred             cCCCcCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHH
Confidence            35678899966  9999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCCCCC
Q psy17740        368 NVAFNMMVTNLPHPVP  383 (384)
Q Consensus       368 ~~hl~~~~~~l~~~~p  383 (384)
                      ..|+..|....+++.+
T Consensus        90 ~~H~~~H~~~~~~~~~  105 (106)
T 2ee8_A           90 AVHKTLHMQTSSPTAA  105 (106)
T ss_dssp             HHHHHHTTSCCCCCCC
T ss_pred             HHHHHHhCCCCCCcCC
Confidence            9999999887776654

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.68  E-value=3.4e-17  Score=128.26  Aligned_cols=87  Identities=37%  Similarity=0.665  Sum_probs=80.8

Q ss_pred             CCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchhhHHH
Q psy17740        290 GERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANV  369 (384)
Q Consensus       290 ~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~~~  369 (384)
                      |+++|.|.+..|++.|.....|.+|++.|.++++|.|.+|++.|.+...|..|+++|+++++|.|..||+.|.....|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            47899997557999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhh
Q psy17740        370 AFNMMVT  376 (384)
Q Consensus       370 hl~~~~~  376 (384)
                      |+..|..
T Consensus        81 H~~~H~~   87 (90)
T 1a1h_A           81 HTKIHLR   87 (90)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhcc
Confidence            9987653

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=3.4e-17  Score=134.66  Aligned_cols=105  Identities=17%  Similarity=0.180  Sum_probs=95.1

Q ss_pred             hhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhh--hcCCCccc-cCccCccc--CChHHHHHHHHHhcCCCCC
Q psy17740        278 SSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRT--HTGEKKFG-CSICNRRF--MRSDHLAKHVKRHSKDGAI  352 (384)
Q Consensus       278 ~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~--Htgekpf~-C~~C~k~F--~~~s~L~~H~r~H~~e~~~  352 (384)
                      ...|.+|++.|+++++|.|.+  |++.|.....|..|++.  |.+++++. |.+|++.|  .....|..|+++|+++++|
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~   81 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL   81 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSS--SSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSC
T ss_pred             chhhhhheeeeCCCCCEECCc--cCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcce
Confidence            356788999999999999965  99999999999999998  87787755 99999999  8999999999999999999


Q ss_pred             CCCCCCCCccchhhHHHHHHHHhhcCCCCCCC
Q psy17740        353 TPSNIGTPSNVLRNANVAFNMMVTNLPHPVPA  384 (384)
Q Consensus       353 ~c~~Cg~~~~~~~~~~~hl~~~~~~l~~~~p~  384 (384)
                      .|..||+.|.....|+.|+..|.....++.|+
T Consensus        82 ~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~~~  113 (115)
T 2dmi_A           82 KCMYCGHSFESLQDLSVHMIKTKHYQKVSGPS  113 (115)
T ss_dssp             BCSSSCCBCSSHHHHHHHHHHTTTTTCSCCCC
T ss_pred             ECCCCCCccCCHHHHHHHHHHhCCcccCCCCC
Confidence            99999999999999999999987766666654

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.66  E-value=1.1e-16  Score=123.56  Aligned_cols=82  Identities=35%  Similarity=0.734  Sum_probs=74.7

Q ss_pred             eeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc---cCcccCChHHH
Q psy17740        263 IFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI---CNRRFMRSDHL  339 (384)
Q Consensus       263 ~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~---C~k~F~~~s~L  339 (384)
                      +|.|.|+.|++.|.....|..|++.|.++++|.|.+.+|++.|.....|.+|++.|++   |.|..   |++.|.+...|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            4788666699999999999999999999999999555599999999999999999998   99999   99999999999


Q ss_pred             HHHHHHhc
Q psy17740        340 AKHVKRHS  347 (384)
Q Consensus       340 ~~H~r~H~  347 (384)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99999885

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.6e-16  Score=129.53  Aligned_cols=87  Identities=21%  Similarity=0.448  Sum_probs=83.7

Q ss_pred             hhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchhh
Q psy17740        287 THTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRN  366 (384)
Q Consensus       287 ~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~  366 (384)
                      .|+++++|.| .  |++.|.....|.+|++.|.++++|.|.+|++.|.+...|.+|+++|+++++|.|..|++.|.....
T Consensus         4 ~h~~~k~~~C-~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   80 (110)
T 2csh_A            4 GSSGDKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDS   80 (110)
T ss_dssp             CCCCCCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHH
T ss_pred             CCCCCCCEec-c--CCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHH
Confidence            5889999999 6  999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhh
Q psy17740        367 ANVAFNMMVT  376 (384)
Q Consensus       367 ~~~hl~~~~~  376 (384)
                      |..|+..|..
T Consensus        81 l~~H~~~~~~   90 (110)
T 2csh_A           81 FHRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHccc
Confidence            9999988765

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.3e-16  Score=126.53  Aligned_cols=87  Identities=29%  Similarity=0.471  Sum_probs=82.1

Q ss_pred             hcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchhhH
Q psy17740        288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNA  367 (384)
Q Consensus       288 H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~  367 (384)
                      +.++++|.|.+  |++.|.....|..|++.|+++++|.|.+|++.|.....|..|+++|+++++|.|..|++.|.....|
T Consensus         3 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   80 (96)
T 2dmd_A            3 SGSSGPHKCEV--CGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQL   80 (96)
T ss_dssp             CCCCCCCCBTT--TTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHH
T ss_pred             CCCCcCeECCC--CCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHH
Confidence            56789999966  9999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhh
Q psy17740        368 NVAFNMMVT  376 (384)
Q Consensus       368 ~~hl~~~~~  376 (384)
                      ..|+..|..
T Consensus        81 ~~H~~~h~~   89 (96)
T 2dmd_A           81 TVHLRSHTG   89 (96)
T ss_dssp             HHHHTTCCS
T ss_pred             HHHHHHhcC
Confidence            999877644

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=3.2e-16  Score=120.01  Aligned_cols=72  Identities=21%  Similarity=0.575  Sum_probs=42.0

Q ss_pred             ceeecccCCCCCcccChhhHHHHHH-hhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCccc
Q psy17740        262 RIFECNYENCGKNYFKSSHLKAHMR-THTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRF  333 (384)
Q Consensus       262 k~f~C~~e~Cgk~F~~~s~L~~H~r-~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F  333 (384)
                      ++|.|.+++|++.|.....|.+|++ .|.++++|.|.++.|++.|.....|.+|+++|+++++|.|.+|++.|
T Consensus         6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            4555655556666666666666665 45556666663333666666666666666666666666666666555

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.64  E-value=1.1e-16  Score=118.70  Aligned_cols=58  Identities=34%  Similarity=0.840  Sum_probs=45.9

Q ss_pred             CCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCC
Q psy17740        291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       291 ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      ||||.|..  ||+.|.....|.+|+++|+|++||.|.+||+.|.+.+.|.+|+++|+|+.
T Consensus         2 EKpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNF--CGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCC--CCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            67888844  88888888888888888888888888888888888888888888887764

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=7.4e-17  Score=131.26  Aligned_cols=95  Identities=15%  Similarity=0.168  Sum_probs=87.1

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNV  363 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~  363 (384)
                      +++.|.++++|.|.+  |++.|.....|..|++.|  +++|.|.+|++.|.....|..|++ |+++++|.|..|++.|..
T Consensus         7 ~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~   81 (107)
T 1wjp_A            7 GASPVENKEVYQCRL--CNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKS   81 (107)
T ss_dssp             CCCCCCCCCCCBCTT--TCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSS
T ss_pred             cCcccCCCcCeECCC--CCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCC
Confidence            456789999999966  999999999999999999  479999999999999999999996 999999999999999999


Q ss_pred             hhhHHHHHH-HHhhcCCCCCC
Q psy17740        364 LRNANVAFN-MMVTNLPHPVP  383 (384)
Q Consensus       364 ~~~~~~hl~-~~~~~l~~~~p  383 (384)
                      ...|..|+. .|....++++.
T Consensus        82 ~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           82 SFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHHHHHcCCCCCCCCC
Confidence            999999997 78777777754

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.63  E-value=3.5e-16  Score=120.11  Aligned_cols=81  Identities=25%  Similarity=0.451  Sum_probs=77.4

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchhhHHHHHH
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVAFN  372 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~~~hl~  372 (384)
                      ||.|.+  |++.|.....|..|++.|.++++|.|..|++.|.....|..|++.|+++++|.|..||+.|.....|..|+.
T Consensus         1 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A            1 SFDCKI--CGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             CEECSS--SCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHH
T ss_pred             CccCCC--CcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHH
Confidence            589965  999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             HHh
Q psy17740        373 MMV  375 (384)
Q Consensus       373 ~~~  375 (384)
                      .|.
T Consensus        79 ~H~   81 (82)
T 2kmk_A           79 KHT   81 (82)
T ss_dssp             HHC
T ss_pred             hhC
Confidence            763

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=8.6e-16  Score=121.56  Aligned_cols=85  Identities=28%  Similarity=0.554  Sum_probs=79.8

Q ss_pred             cCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCC--CCCCCCCCCCCccchhh
Q psy17740        289 TGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKD--GAITPSNIGTPSNVLRN  366 (384)
Q Consensus       289 ~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e--~~~~c~~Cg~~~~~~~~  366 (384)
                      .++++|.|.+  |++.|.....|.+|++.|+++++|.|.+|++.|.+...|..|++.|+++  ++|.|..|++.|.....
T Consensus         3 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~   80 (95)
T 2yt9_A            3 SGSSGVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDH   80 (95)
T ss_dssp             CCCSCEECSS--SCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHH
T ss_pred             CCCCCeECCC--CCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHH
Confidence            5788999965  9999999999999999999999999999999999999999999999997  89999999999999999


Q ss_pred             HHHHHH-HHh
Q psy17740        367 ANVAFN-MMV  375 (384)
Q Consensus       367 ~~~hl~-~~~  375 (384)
                      |..|+. .|.
T Consensus        81 L~~H~~~~H~   90 (95)
T 2yt9_A           81 LNGHIKQVHS   90 (95)
T ss_dssp             HHHHHHHTSC
T ss_pred             HHHHHHHhcC
Confidence            999986 443

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.62  E-value=1.1e-15  Score=121.87  Aligned_cols=86  Identities=28%  Similarity=0.552  Sum_probs=81.1

Q ss_pred             CCCccccccCCCCCccCChHHHHHHHhhhcCCCccccC--ccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchhhH
Q psy17740        290 GERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS--ICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNA  367 (384)
Q Consensus       290 ~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~--~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~  367 (384)
                      ..++|.|.++.|++.|.....|..|++.|+++++|.|.  .|++.|.....|.+|+++|+++++|.|..|++.|.....|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            45789998778999999999999999999999999996  6999999999999999999999999999999999999999


Q ss_pred             HHHHHHHh
Q psy17740        368 NVAFNMMV  375 (384)
Q Consensus       368 ~~hl~~~~  375 (384)
                      ..|+..|.
T Consensus        92 ~~H~~~H~   99 (100)
T 2ebt_A           92 ALHMKRHQ   99 (100)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            99998874

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=7e-16  Score=118.12  Aligned_cols=74  Identities=34%  Similarity=0.646  Sum_probs=70.3

Q ss_pred             cCCCccccccCCCCCccCChHHHHHHHh-hhcCCCccccCc--cCcccCChHHHHHHHHHhcCCCCCCCCCCCCCcc
Q psy17740        289 TGERPFLCQWTGCGRRFSRSDELSRHKR-THTGEKKFGCSI--CNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSN  362 (384)
Q Consensus       289 ~~ekp~~C~~~~Cgk~F~~~~~L~~H~r-~Htgekpf~C~~--C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~  362 (384)
                      +++++|.|.+..|++.|.....|.+|++ .|.++++|.|.+  |++.|.+...|.+|+++|+++++|.|..||+.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            5788999988889999999999999999 799999999999  9999999999999999999999999999999873

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=2.8e-16  Score=121.94  Aligned_cols=80  Identities=29%  Similarity=0.578  Sum_probs=72.1

Q ss_pred             hHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCC----CccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        280 HLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE----KKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       280 ~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htge----kpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      .|.+|+++|.++++|.|.+  |++.|.....|.+|++.|+++    ++|.|.+|++.|.+...|..|+++|++++++.|.
T Consensus         2 s~~~H~~~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~   79 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGE   79 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCC
T ss_pred             CcccccceecCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccC
Confidence            3567899999999999965  999999999999999887765    7899999999999999999999999999999999


Q ss_pred             CCCCCc
Q psy17740        356 NIGTPS  361 (384)
Q Consensus       356 ~Cg~~~  361 (384)
                      .||..+
T Consensus        80 ~~~~~~   85 (86)
T 1x6h_A           80 NSGPSS   85 (86)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            998764

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=5.9e-16  Score=124.74  Aligned_cols=83  Identities=12%  Similarity=0.166  Sum_probs=75.0

Q ss_pred             CCcccChhhHHHHHHhhcCCCccccccCCCCCccC-ChHHHHHHHhhhcC-CCccccCccCcccCChHHHHHHHHHhcCC
Q psy17740        272 GKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFS-RSDELSRHKRTHTG-EKKFGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       272 gk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~-~~~~L~~H~r~Htg-ekpf~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      ...+.....+..|++.|.++++|.|.+  |++.|. ....|.+|++.|++ +++|.|.+|++.|.+...|.+|+++|+++
T Consensus         3 s~s~~~~~~~~~h~~~h~~~~~~~C~~--C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~   80 (98)
T 2gqj_A            3 SGSSGPGGPEEQWQRAIHERGEAVCPT--CNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA   80 (98)
T ss_dssp             CCCCCCCCSCSHHHHTTTTTSCCCCTT--TCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred             CCCCCCCCcHHHHHHHhccCCCcCCCC--CCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence            445666677889999999999999965  999999 99999999999999 99999999999999999999999999999


Q ss_pred             CCCCCCC
Q psy17740        350 GAITPSN  356 (384)
Q Consensus       350 ~~~~c~~  356 (384)
                      +++....
T Consensus        81 kp~~~~~   87 (98)
T 2gqj_A           81 KPSDAEA   87 (98)
T ss_dssp             CSSCCCC
T ss_pred             CCCCCCC
Confidence            8866543

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.59  E-value=9.8e-16  Score=119.62  Aligned_cols=84  Identities=27%  Similarity=0.590  Sum_probs=78.9

Q ss_pred             CCccccccCCCCCccCChHHHHHHHhhhcCCCccccC--ccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchhhHH
Q psy17740        291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS--ICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNAN  368 (384)
Q Consensus       291 ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~--~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~~  368 (384)
                      .++|.|.+.+|++.|.....|..|++.|.++++|.|+  .|++.|.....|..|+++|+++++|.|..||+.|.....|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            4679997777999999999999999999999999997  59999999999999999999999999999999999999999


Q ss_pred             HHHHHH
Q psy17740        369 VAFNMM  374 (384)
Q Consensus       369 ~hl~~~  374 (384)
                      .|+..|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            998654

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.59  E-value=2e-16  Score=124.28  Aligned_cols=83  Identities=39%  Similarity=0.715  Sum_probs=75.7

Q ss_pred             CceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHH
Q psy17740        261 RRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLA  340 (384)
Q Consensus       261 ~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~  340 (384)
                      +++|.|..  |++.|.....|..|+++|.++++|.|.+  |++.|.....|.+|++.|++ .+|.|..|++.|.....|.
T Consensus         1 ek~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~   75 (88)
T 1llm_C            1 MKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLE   75 (88)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCC--CCCccCCHHHHHHHHHHcCCCCCccCCC--CCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhH
Confidence            36899965  9999999999999999999999999965  99999999999999999885 8899999999999999999


Q ss_pred             HHHHHhcC
Q psy17740        341 KHVKRHSK  348 (384)
Q Consensus       341 ~H~r~H~~  348 (384)
                      .|++.+++
T Consensus        76 ~H~~~~h~   83 (88)
T 1llm_C           76 NEVARLKK   83 (88)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99987653

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.54  E-value=5e-15  Score=114.17  Aligned_cols=79  Identities=20%  Similarity=0.447  Sum_probs=73.8

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhhcCCCccccCc--cCcccCChHHHHHHHHHhcCCCCCCCCC---CCCCccchhhH
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI--CNRRFMRSDHLAKHVKRHSKDGAITPSN---IGTPSNVLRNA  367 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~--C~k~F~~~s~L~~H~r~H~~e~~~~c~~---Cg~~~~~~~~~  367 (384)
                      ||.|.|..|++.|.....|..|++.|+++++|.|++  |++.|.+...|.+|+++|++   |.|..   |++.|.....|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            588955569999999999999999999999999998  99999999999999999998   99999   99999999999


Q ss_pred             HHHHHHH
Q psy17740        368 NVAFNMM  374 (384)
Q Consensus       368 ~~hl~~~  374 (384)
                      ..|+..|
T Consensus        78 ~~H~~~h   84 (85)
T 2j7j_A           78 LKHVAEC   84 (85)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhc
Confidence            9998764

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.53  E-value=7.8e-16  Score=120.91  Aligned_cols=86  Identities=35%  Similarity=0.566  Sum_probs=80.0

Q ss_pred             CCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchhhHHHH
Q psy17740        291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVA  370 (384)
Q Consensus       291 ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~~~h  370 (384)
                      +++|.|.+  |++.|.....|.+|++.|+++++|.|.+|++.|.+...|..|+++|++ .+|.|..|++.|.....|..|
T Consensus         1 ek~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H   77 (88)
T 1llm_C            1 MKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENE   77 (88)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCC--CCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHH
Confidence            57899965  999999999999999999999999999999999999999999999985 789999999999999999999


Q ss_pred             HHHHhhcCC
Q psy17740        371 FNMMVTNLP  379 (384)
Q Consensus       371 l~~~~~~l~  379 (384)
                      +..+....+
T Consensus        78 ~~~~h~~~~   86 (88)
T 1llm_C           78 VARLKKLVG   86 (88)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHHhc
Confidence            988876543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=9e-15  Score=111.89  Aligned_cols=64  Identities=39%  Similarity=0.830  Sum_probs=31.4

Q ss_pred             cCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCC
Q psy17740        289 TGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITP  354 (384)
Q Consensus       289 ~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c  354 (384)
                      .++++|.|.+  |++.|.....|.+|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|
T Consensus        14 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECCC--CCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3444455533  555555555555555555544555555555555555555555555555444443

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.52  E-value=1.1e-14  Score=107.86  Aligned_cols=58  Identities=41%  Similarity=0.810  Sum_probs=54.1

Q ss_pred             CceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCC
Q psy17740        261 RRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK  322 (384)
Q Consensus       261 ~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgek  322 (384)
                      +|+|.|..  ||+.|.....|.+|+++|++++||.|..  ||+.|.....|.+|+++|+|++
T Consensus         2 EKpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~~--C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNF--CGKTYRDASGLSRHRRAHLGYRPRSCPE--CGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHHHHHTCCCEECTT--TCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCC--CCCEeCCHHHHHHHHHHhCCCcCeECCC--CCCCcCCHHHHHHHhCccCCCC
Confidence            58999965  9999999999999999999999999955  9999999999999999999975

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=2.8e-14  Score=115.18  Aligned_cols=78  Identities=14%  Similarity=0.217  Sum_probs=70.5

Q ss_pred             CCcccChhhHHHHHHhhcCCCccccccCCCCCcc-CChHHHHHHHhhhcCCCccccCccCcccCChHHHHHH-HHHhcCC
Q psy17740        272 GKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRF-SRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKH-VKRHSKD  349 (384)
Q Consensus       272 gk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F-~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H-~r~H~~e  349 (384)
                      ...|.....|..|++.|.++++|.|..  |++.| .....|..|++.| ++++|.|.+|++.|.+...|..| +++|+++
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPT--CQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTT--TCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCC--CCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            456777889999999999999999955  99999 9999999999999 99999999999999999999999 8888764


Q ss_pred             CCCC
Q psy17740        350 GAIT  353 (384)
Q Consensus       350 ~~~~  353 (384)
                       +|.
T Consensus        90 -p~~   92 (96)
T 2ctd_A           90 -PSG   92 (96)
T ss_dssp             -SSC
T ss_pred             -CCC
Confidence             444

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.50  E-value=2.4e-14  Score=108.71  Aligned_cols=64  Identities=33%  Similarity=0.726  Sum_probs=50.1

Q ss_pred             hhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCC
Q psy17740        287 THTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAI  352 (384)
Q Consensus       287 ~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~  352 (384)
                      .+.++++|.|..  |++.|.....|.+|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|
T Consensus        11 ~~~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDR--CQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTT--SSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCC--CCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            356777788854  8888888888888888888888888888888888888888888888877765

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=1.8e-14  Score=108.91  Aligned_cols=64  Identities=39%  Similarity=0.782  Sum_probs=58.5

Q ss_pred             HHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCC
Q psy17740        285 MRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       285 ~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      .++|.++++|.|.+  |++.|.....|.+|++.|+++++|.|.+|++.|.+...|.+|+++|+++.
T Consensus         6 ~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            6 SGIHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCTTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CcccCCCCCccCCC--CCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            45789999999965  99999999999999999999999999999999999999999999998764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=3.9e-14  Score=106.33  Aligned_cols=64  Identities=25%  Similarity=0.461  Sum_probs=57.1

Q ss_pred             hhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCC
Q psy17740        287 THTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAI  352 (384)
Q Consensus       287 ~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~  352 (384)
                      .|.++++|.|.+  |++.|.....|.+|++.|+++++|.|.+|++.|.+...|.+|+++|+++++.
T Consensus         3 s~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSE--CSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            477889999965  9999999999999999999999999999999999999999999999988764

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=2.6e-14  Score=109.35  Aligned_cols=68  Identities=31%  Similarity=0.628  Sum_probs=60.8

Q ss_pred             HHHHHHhhcCCCccccccCCCCCccCChHHHHHHHh-hhcCC-CccccCccCcccCChHHHHHHHHHhcCCC
Q psy17740        281 LKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKR-THTGE-KKFGCSICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       281 L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r-~Htge-kpf~C~~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      |.+|+++|.++++|.|.+  |++.|.....|.+|++ .|.++ ++|.|.+|++.|.+...|.+|+++|++..
T Consensus         3 ~~~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCCCCCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             CCccccccCCCCCeECCC--cCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            457899999999999965  9999999999999997 67775 89999999999999999999999977543

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.42  E-value=3.2e-14  Score=119.24  Aligned_cols=82  Identities=23%  Similarity=0.351  Sum_probs=62.9

Q ss_pred             CceeecccCCCCCccc------ChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccC
Q psy17740        261 RRIFECNYENCGKNYF------KSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFM  334 (384)
Q Consensus       261 ~k~f~C~~e~Cgk~F~------~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~  334 (384)
                      .+.+.|.+  |++.|.      ....|..|+ .|+++++|.|.+  |++.|.....|.+|++.|  +++|.|.+|++.|.
T Consensus        39 ~~~~~c~~--~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~  111 (129)
T 2wbt_A           39 QKRLIRAI--VKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPL--CLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFT  111 (129)
T ss_dssp             HHHHHHHH--HHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTT--TCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCS
T ss_pred             hCcccchh--hhcccCCCcccCCHHHHHHHH-HhCCCCCeECCC--CCcccCCHhHHHHHHHHC--CCCCCCCCCCcccC
Confidence            45566754  665554      556666666 577888888855  888888888888888888  78888888888888


Q ss_pred             ChHHHHHHHHHhcCC
Q psy17740        335 RSDHLAKHVKRHSKD  349 (384)
Q Consensus       335 ~~s~L~~H~r~H~~e  349 (384)
                      +...|.+|+++|+++
T Consensus       112 ~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A          112 STDSALDHVCKKHNI  126 (129)
T ss_dssp             SHHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHHHCCc
Confidence            888888888888875

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=2.3e-13  Score=103.95  Aligned_cols=64  Identities=42%  Similarity=0.824  Sum_probs=59.9

Q ss_pred             CCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCcccc
Q psy17740        259 PRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGC  326 (384)
Q Consensus       259 ~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C  326 (384)
                      ..+++|.|..  |++.|.....|.+|++.|.++++|.|.+  |++.|.....|.+|+++|++++||+|
T Consensus        14 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCDE--CGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCSCSEECSS--SCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECCC--CCcccCCHHHHHHHHHHcCCCcCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3467899965  9999999999999999999999999966  99999999999999999999999998

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.41  E-value=1.8e-13  Score=98.14  Aligned_cols=57  Identities=37%  Similarity=0.704  Sum_probs=47.2

Q ss_pred             CCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcC
Q psy17740        290 GERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSK  348 (384)
Q Consensus       290 ~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~  348 (384)
                      |+++|.|.+  |++.|.....|..|++.|+++++|.|.+|++.|.+...|..|+++|++
T Consensus         1 g~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSY--CGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTT--TCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCC--CcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            467899955  999999999999999999999999999999999999999999998874

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.41  E-value=1.7e-14  Score=120.89  Aligned_cols=113  Identities=12%  Similarity=0.073  Sum_probs=86.1

Q ss_pred             CCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCcc------CChHHHHHHHhhhcCCCccccCccCc
Q psy17740        258 DPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRF------SRSDELSRHKRTHTGEKKFGCSICNR  331 (384)
Q Consensus       258 ~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F------~~~~~L~~H~r~Htgekpf~C~~C~k  331 (384)
                      +.+.++|.|.+.++...|.....+..|. ....++.+.|.+  |++.|      .....|..|+ .|+++++|.|.+|++
T Consensus         7 ~~~~k~~~~~~k~~~~~~s~ee~~~~~~-l~~~~~~~~c~~--~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k   82 (129)
T 2wbt_A            7 DSGSKKYLSNHKGIFIHVTLEELKRYHQ-LTPEQKRLIRAI--VKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLM   82 (129)
T ss_dssp             CTTCCGGGGCSSCEEEECCHHHHHHHTT-SCHHHHHHHHHH--HHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCC
T ss_pred             cccccccccccCCeeeeecHHhhhcccc-CChhhCcccchh--hhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCc
Confidence            4456789887755555554333222222 123356678865  76554      4677777777 699999999999999


Q ss_pred             ccCChHHHHHHHHHhcCCCCCCCCCCCCCccchhhHHHHHHHHhh
Q psy17740        332 RFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVAFNMMVT  376 (384)
Q Consensus       332 ~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~~~hl~~~~~  376 (384)
                      .|.+...|..|+++|  +++|.|..||+.|.....|+.|+..|..
T Consensus        83 ~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~  125 (129)
T 2wbt_A           83 PFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHN  125 (129)
T ss_dssp             EESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred             ccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCC
Confidence            999999999999999  8999999999999999999999987643

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=1.3e-13  Score=102.03  Aligned_cols=62  Identities=32%  Similarity=0.642  Sum_probs=56.2

Q ss_pred             HHhhcCCCccccccCCCCCccCChHHHHHHHhh-h-cCCCccccCccCcccCChHHHHHHHHHhcC
Q psy17740        285 MRTHTGERPFLCQWTGCGRRFSRSDELSRHKRT-H-TGEKKFGCSICNRRFMRSDHLAKHVKRHSK  348 (384)
Q Consensus       285 ~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~-H-tgekpf~C~~C~k~F~~~s~L~~H~r~H~~  348 (384)
                      +++|.++++|.|..  |++.|.....|.+|++. | .++++|.|++|++.|.+...|..|+++|++
T Consensus         2 ~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTT--TCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCC--CcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            35789999999965  99999999999999988 7 589999999999999999999999999986

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=9.5e-14  Score=113.78  Aligned_cols=70  Identities=26%  Similarity=0.470  Sum_probs=43.5

Q ss_pred             CCCCCceeecccCCCCCcccChhhHHHHHH-hh---cCCCccccccCCCCCccCChHHHHHH-HhhhcCCCccccCccC
Q psy17740        257 NDPRRRIFECNYENCGKNYFKSSHLKAHMR-TH---TGERPFLCQWTGCGRRFSRSDELSRH-KRTHTGEKKFGCSICN  330 (384)
Q Consensus       257 ~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r-~H---~~ekp~~C~~~~Cgk~F~~~~~L~~H-~r~Htgekpf~C~~C~  330 (384)
                      +..++++|.|..  |++.|.....|.+|++ .|   .++++|.|..  ||+.|..+..|.+| ++.|+|++||.|.++.
T Consensus        12 ~~~gekpy~C~~--Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~--Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           12 NKKVEGGYECKY--CTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVE--CNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCCCSSEECSS--CSCEESCHHHHHHHHHHHCSSCCCSCCEEETT--TTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             cCCCCcCcCCCC--CCCccCCHHHHHHHHHhhCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            344556666643  6666666666666665 36   4466666643  66666666666666 5666666666666543

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=7.5e-13  Score=102.35  Aligned_cols=79  Identities=20%  Similarity=0.466  Sum_probs=68.4

Q ss_pred             hhccCCCCCCCCCCceeecccCCCCCcccChhhHHHHHHhhcCC----CccccccCCCCCccCChHHHHHHHhhhcCCCc
Q psy17740        248 IKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGE----RPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK  323 (384)
Q Consensus       248 lk~h~~~~~~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~e----kp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekp  323 (384)
                      ++.|.+.+.   .+++|.|..  |++.|.....|.+|++.|++.    ++|.|.+  |++.|.....|.+|++.|+++++
T Consensus         3 ~~~H~~~H~---~~k~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~   75 (86)
T 1x6h_A            3 SGSSGRTHT---GEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARHADNCAGPDG   75 (86)
T ss_dssp             TTCCSTTCC---CCCCEECSS--SSCEESSHHHHHHHHHHTTCSSCCCCCEECSS--SCCEESCHHHHHHHHHHCCCCCS
T ss_pred             cccccceec---CCCCCcCCC--CCCccCCHHHHHHHHHHhcCCcCCCcceECCC--CCChhCCHHHHHHHHHHccCCCC
Confidence            344555443   458899965  999999999999999987765    7899965  99999999999999999999999


Q ss_pred             cccCccCccc
Q psy17740        324 FGCSICNRRF  333 (384)
Q Consensus       324 f~C~~C~k~F  333 (384)
                      |.|..|+..|
T Consensus        76 ~~~~~~~~~~   85 (86)
T 1x6h_A           76 VEGENSGPSS   85 (86)
T ss_dssp             CCCCCCCCCC
T ss_pred             cccCCCCCCC
Confidence            9999999876

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=9.5e-14  Score=104.76  Aligned_cols=67  Identities=49%  Similarity=0.946  Sum_probs=52.1

Q ss_pred             HHHHHH-hhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhc
Q psy17740        281 LKAHMR-THTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS  347 (384)
Q Consensus       281 L~~H~r-~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~  347 (384)
                      |..|+. .|.++++|.|.+..|++.|.....|.+|++.|+++++|.|.+|++.|.+...|.+|+++|+
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            334444 4777888888644688888888888888888888888888888888888888888888774

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=1.4e-13  Score=110.72  Aligned_cols=79  Identities=14%  Similarity=0.069  Sum_probs=71.4

Q ss_pred             CCCccCChHHHHHHHhhhcCCCccccCccCcccC-ChHHHHHHHHHhcC-CCCCCCCCCCCCccchhhHHHHHHHHhhcC
Q psy17740        301 CGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFM-RSDHLAKHVKRHSK-DGAITPSNIGTPSNVLRNANVAFNMMVTNL  378 (384)
Q Consensus       301 Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~-~~s~L~~H~r~H~~-e~~~~c~~Cg~~~~~~~~~~~hl~~~~~~l  378 (384)
                      +...+.....+.+|++.|.++++|.|.+|++.|. +...|.+|+++|++ +++|.|..|++.|.....|+.|+..|....
T Consensus         2 ss~s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~k   81 (98)
T 2gqj_A            2 SSGSSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAK   81 (98)
T ss_dssp             CCCCCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSC
T ss_pred             CCCCCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCC
Confidence            4456777788899999999999999999999999 99999999999999 999999999999999999999997776544


Q ss_pred             C
Q psy17740        379 P  379 (384)
Q Consensus       379 ~  379 (384)
                      +
T Consensus        82 p   82 (98)
T 2gqj_A           82 P   82 (98)
T ss_dssp             S
T ss_pred             C
Confidence            3

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=6.5e-13  Score=107.07  Aligned_cols=81  Identities=12%  Similarity=0.110  Sum_probs=73.0

Q ss_pred             CCccCChHHHHHHHhhhcCCCccccCccCccc-CChHHHHHHHHHhcCCCCCCCCCCCCCccchhhHHHH-HHHHhhcCC
Q psy17740        302 GRRFSRSDELSRHKRTHTGEKKFGCSICNRRF-MRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVA-FNMMVTNLP  379 (384)
Q Consensus       302 gk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F-~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~~~h-l~~~~~~l~  379 (384)
                      ...|.....|..|++.|.++++|.|.+|++.| .+...|..|+++| ++++|.|..||+.|.....|+.| +..|...+.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            45678889999999999999999999999999 9999999999999 99999999999999999999999 887766555


Q ss_pred             CCCC
Q psy17740        380 HPVP  383 (384)
Q Consensus       380 ~~~p  383 (384)
                      +|.+
T Consensus        92 ~~~~   95 (96)
T 2ctd_A           92 GPSS   95 (96)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            5543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.36  E-value=8.9e-13  Score=99.87  Aligned_cols=63  Identities=33%  Similarity=0.808  Sum_probs=58.1

Q ss_pred             CCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCcc
Q psy17740        258 DPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKF  324 (384)
Q Consensus       258 ~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf  324 (384)
                      ....++|.|..  |++.|.....|.+|++.|.++++|.|.+  |++.|.+...|.+|++.|++++||
T Consensus        12 ~~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDR--CQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTT--SSCCBSCHHHHHHHHHHHCCCCSEECTT--TCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCCCCeECCC--CCceeCCHHHHHHHHHHcCCCCCEECCC--CCchhCCHHHHHHHHHhcCCCCCC
Confidence            34567899965  9999999999999999999999999965  999999999999999999999986

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.36  E-value=6.9e-13  Score=94.99  Aligned_cols=56  Identities=32%  Similarity=0.715  Sum_probs=46.5

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCC
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      ||.|..  |++.|.....|..|++.|+++++|.|.+|++.|.+...|.+|+++|++++
T Consensus         1 p~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEE--CGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTT--TCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCC--CcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            578854  88888888888888888888888888888888888888888888887765

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.35  E-value=5.1e-13  Score=105.82  Aligned_cols=60  Identities=27%  Similarity=0.572  Sum_probs=36.5

Q ss_pred             hcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHH-HhcCC
Q psy17740        288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVK-RHSKD  349 (384)
Q Consensus       288 H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r-~H~~e  349 (384)
                      +...++|.|.+  |++.|.++..|.+|+++|++++||.|.+|++.|.+...|.+|++ .|.++
T Consensus        23 ~~~~~~h~C~~--Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           23 SASAECHLCPV--CGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CCCCTTEECTT--SCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCEECCC--CCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            44555566643  66666666666666666666666666666666666666666653 34443

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=6.6e-13  Score=108.71  Aligned_cols=70  Identities=20%  Similarity=0.355  Sum_probs=63.8

Q ss_pred             hcCCCccccccCCCCCccCChHHHHHHHh-hh---cCCCccccCccCcccCChHHHHHH-HHHhcCCCCCCCCCCCC
Q psy17740        288 HTGERPFLCQWTGCGRRFSRSDELSRHKR-TH---TGEKKFGCSICNRRFMRSDHLAKH-VKRHSKDGAITPSNIGT  359 (384)
Q Consensus       288 H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r-~H---tgekpf~C~~C~k~F~~~s~L~~H-~r~H~~e~~~~c~~Cg~  359 (384)
                      ..|+++|.|..  |++.|..+..|.+|++ .|   .++++|.|.+||+.|.+...|..| +++|+++++|.|..+..
T Consensus        13 ~~gekpy~C~~--Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           13 KKVEGGYECKY--CTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCCCSSEECSS--CSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCCCcCcCCCC--CCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            46899999955  9999999999999998 59   668999999999999999999999 89999999999987654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=7.6e-13  Score=101.16  Aligned_cols=66  Identities=26%  Similarity=0.558  Sum_probs=55.7

Q ss_pred             hhcCCCccccccCCCCCccCChHHHHHHHhhhcC---CCccccCccCcccCChHHHHHHHHH-hcCCCCCCC
Q psy17740        287 THTGERPFLCQWTGCGRRFSRSDELSRHKRTHTG---EKKFGCSICNRRFMRSDHLAKHVKR-HSKDGAITP  354 (384)
Q Consensus       287 ~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htg---ekpf~C~~C~k~F~~~s~L~~H~r~-H~~e~~~~c  354 (384)
                      .|+++++|.|.+  |++.|.....|.+|++.|++   +++|.|.+|++.|.+...|.+|++. |.++.+...
T Consensus         1 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A            1 GSSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             CCCSCCCEECSS--SCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCCCCcCeECCC--CCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            378899999965  99999999999999999986   8899999999999999999999965 555555443

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=4.6e-15  Score=111.28  Aligned_cols=71  Identities=28%  Similarity=0.395  Sum_probs=61.3

Q ss_pred             hhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        278 SSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       278 ~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      ...|..|++.|.++++|.|.+  |++.|.....|..       +++|.|.+|++.|.+...|..|+++|+++++|.|..|
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSK--CGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSS--SCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCc--ccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            456778888999999999955  9999988888765       7889999999999999999999999999999998877

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=2.2e-12  Score=97.24  Aligned_cols=64  Identities=22%  Similarity=0.369  Sum_probs=60.1

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchhhHHHHHHHHhhc
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVAFNMMVTN  377 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~~~hl~~~~~~  377 (384)
                      +.++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|++.|.....|..|+..|...
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            4568999999999999999999999999999999999999999999999999999999988654

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=2.9e-12  Score=92.79  Aligned_cols=56  Identities=48%  Similarity=0.966  Sum_probs=44.5

Q ss_pred             CccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHH-HHhcCC
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHV-KRHSKD  349 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~-r~H~~e  349 (384)
                      ++|.|.+  |++.|.....|.+|++.|+++++|.|.+|++.|.+...|.+|+ +.|.++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCC--CccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            4688854  8888888888888888888888888888888888888888886 466554

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=6e-12  Score=94.22  Aligned_cols=63  Identities=24%  Similarity=0.504  Sum_probs=57.7

Q ss_pred             CCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCcc
Q psy17740        258 DPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKF  324 (384)
Q Consensus       258 ~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf  324 (384)
                      ...+++|.|..  |++.|.....|.+|++.|.++++|.|.+  |++.|.....|.+|++.|+++++.
T Consensus         4 ~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            4 GSSGHPEKCSE--CSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSCSEECSS--SSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCEeCCC--CCCccCCHHHHHHHHHHHhCCCCC
Confidence            34568999965  9999999999999999999999999966  999999999999999999998874

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.24  E-value=1.3e-11  Score=97.31  Aligned_cols=55  Identities=27%  Similarity=0.462  Sum_probs=36.5

Q ss_pred             CCCccCChHHHHHHHhh-hcCCCc--------cccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        301 CGRRFSRSDELSRHKRT-HTGEKK--------FGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       301 Cgk~F~~~~~L~~H~r~-Htgekp--------f~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      |++.|.....|.+|++. |.++++        |.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus        31 C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           31 CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             CCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            55555555555555554 555544        77777777777777777777777777777764

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=1.8e-12  Score=98.98  Aligned_cols=65  Identities=25%  Similarity=0.437  Sum_probs=59.2

Q ss_pred             HHHHHhhhcCCCccccCccCcccCChHHHHHHHH-HhcCC-CCCCCCCCCCCccchhhHHHHHHHHh
Q psy17740        311 LSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVK-RHSKD-GAITPSNIGTPSNVLRNANVAFNMMV  375 (384)
Q Consensus       311 L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r-~H~~e-~~~~c~~Cg~~~~~~~~~~~hl~~~~  375 (384)
                      |.+|+++|+++++|.|.+|++.|.+...|.+|++ .|.++ ++|.|..|++.|.....|..|+..+.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H   69 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH   69 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhC
Confidence            4579999999999999999999999999999998 56664 89999999999999999999998653

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.21  E-value=2.5e-11  Score=95.73  Aligned_cols=63  Identities=27%  Similarity=0.352  Sum_probs=56.8

Q ss_pred             ceeecccCCCCCcccChhhHHHHHHh-hcCCCc--------cccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        262 RIFECNYENCGKNYFKSSHLKAHMRT-HTGERP--------FLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       262 k~f~C~~e~Cgk~F~~~s~L~~H~r~-H~~ekp--------~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      ..|.|.  .|++.|.....|.+|++. |.++++        |.|..  |++.|.....|.+|+++|+++++|.|..
T Consensus        24 ~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           24 LSRPKK--SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             SSSSCC--CCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSS--TTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             CCCccc--ccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            456784  599999999999999998 998887        99955  9999999999999999999999999963

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.18  E-value=1.1e-11  Score=93.12  Aligned_cols=60  Identities=70%  Similarity=1.265  Sum_probs=39.0

Q ss_pred             CCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhh
Q psy17740        259 PRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTH  318 (384)
Q Consensus       259 ~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~H  318 (384)
                      ...++|.|.+++|++.|.....|.+|++.|+++++|.|.+..|++.|.....|.+|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            344567775555777777777777777777767777774434666666666666666654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=9.7e-12  Score=94.92  Aligned_cols=63  Identities=14%  Similarity=0.155  Sum_probs=56.6

Q ss_pred             hhcCCCccccCccCcccCChHHHHHHHHHhcC---CCCCCCCCCCCCccchhhHHHHH-HHHhhcCC
Q psy17740        317 THTGEKKFGCSICNRRFMRSDHLAKHVKRHSK---DGAITPSNIGTPSNVLRNANVAF-NMMVTNLP  379 (384)
Q Consensus       317 ~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~---e~~~~c~~Cg~~~~~~~~~~~hl-~~~~~~l~  379 (384)
                      .|+++++|.|.+|++.|.+...|.+|+++|++   +++|.|..||+.|.....|..|+ ..|....+
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            48899999999999999999999999999996   89999999999999999999999 45554433

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.18  E-value=2.3e-11  Score=86.92  Aligned_cols=56  Identities=36%  Similarity=0.742  Sum_probs=52.2

Q ss_pred             eeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCC
Q psy17740        263 IFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK  322 (384)
Q Consensus       263 ~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgek  322 (384)
                      +|.|..  |++.|.....|..|++.|.++++|.|.+  |++.|.....|.+|++.|++++
T Consensus         1 p~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEE--CGIRXKKPSMLKKHIRTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTT--TCCBCSSHHHHHHHHHHTSSCCCEECSS--SSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCC--CcCcCCCHHHHHHHHHhcCCCCCccCCC--CCchhcCHHHHHHHHHHhcccC
Confidence            478955  9999999999999999999999999965  9999999999999999999876

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.17  E-value=2.1e-11  Score=87.16  Aligned_cols=56  Identities=36%  Similarity=0.737  Sum_probs=49.5

Q ss_pred             CceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcC
Q psy17740        261 RRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTG  320 (384)
Q Consensus       261 ~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htg  320 (384)
                      +++|.|..  |++.|.....|..|++.|+++++|.|.+  |++.|.....|.+|++.|++
T Consensus         2 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSY--CGKFFRSNYYLNIHLRTHTGEKPYKCEF--CEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTT--TCCBCSCHHHHHHHHHHHHCCCCEECSS--SSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCC--CcchhCChHHHHHHHHHcCCCCCcCCCC--CcchhCCHHHHHHHHHHhcC
Confidence            46899965  9999999999999999999999999965  99999999999999999874

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.16  E-value=3.9e-11  Score=94.91  Aligned_cols=60  Identities=25%  Similarity=0.562  Sum_probs=53.8

Q ss_pred             CCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHH-hhhcCCC
Q psy17740        259 PRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHK-RTHTGEK  322 (384)
Q Consensus       259 ~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~-r~Htgek  322 (384)
                      ...+.|.|..  ||+.|.....|.+|+++|+++++|.|.+  |++.|.+...|.+|+ +.|.+|.
T Consensus        24 ~~~~~h~C~~--Cgk~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           24 ASAECHLCPV--CGESFASKGAQERHLRLLHAAQVFPCKY--CPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCCTTEECTT--SCCEESSHHHHHHHHHTTSCSSSEECTT--SSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCEECCC--CCCCcCcHHHHhhhhhhccCCCccCCCC--CCCEeCCHHHHHHhCcccCcCCC
Confidence            3457899965  9999999999999999999999999966  999999999999996 5788774

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.16  E-value=1.2e-11  Score=84.98  Aligned_cols=45  Identities=29%  Similarity=0.571  Sum_probs=32.9

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      +|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466677777777777777777777777777777777777777665

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.16  E-value=4.2e-11  Score=89.91  Aligned_cols=59  Identities=47%  Similarity=0.957  Sum_probs=54.4

Q ss_pred             hcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc--cCcccCChHHHHHHHHHh
Q psy17740        288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI--CNRRFMRSDHLAKHVKRH  346 (384)
Q Consensus       288 H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~--C~k~F~~~s~L~~H~r~H  346 (384)
                      +...++|.|.+.+|++.|.....|.+|++.|+++++|.|.+  |++.|.+...|.+|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            56778999977679999999999999999999999999975  999999999999999876

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=1.3e-11  Score=90.95  Aligned_cols=61  Identities=15%  Similarity=0.268  Sum_probs=55.8

Q ss_pred             HhhhcCCCccccCccCcccCChHHHHHHHHH-h-cCCCCCCCCCCCCCccchhhHHHHHHHHh
Q psy17740        315 KRTHTGEKKFGCSICNRRFMRSDHLAKHVKR-H-SKDGAITPSNIGTPSNVLRNANVAFNMMV  375 (384)
Q Consensus       315 ~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~-H-~~e~~~~c~~Cg~~~~~~~~~~~hl~~~~  375 (384)
                      +++|+++++|.|..|++.|.+...|..|++. | .++++|.|..||+.|.....|..|+..+-
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            4579999999999999999999999999998 6 58899999999999999999999988763

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=5.2e-11  Score=89.50  Aligned_cols=60  Identities=47%  Similarity=0.935  Sum_probs=54.7

Q ss_pred             CCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhc
Q psy17740        258 DPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHT  319 (384)
Q Consensus       258 ~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Ht  319 (384)
                      ..+.++|.|.++.|++.|.....|.+|++.|.++++|.|.+  |++.|.....|.+|++.|+
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHTTCC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCC--CCchhCCHHHHHHHHHhcC
Confidence            44568899976679999999999999999999999999965  9999999999999999885

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.6e-11  Score=84.06  Aligned_cols=45  Identities=31%  Similarity=0.485  Sum_probs=31.8

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      +|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366667777777777777777777777777777777777777665

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.8e-11  Score=90.85  Aligned_cols=58  Identities=21%  Similarity=0.498  Sum_probs=42.2

Q ss_pred             cCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccC-ccCcccCChHHHHHHHHHhcCCC
Q psy17740        289 TGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS-ICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       289 ~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~-~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      .++++|.|.+  |++.|. ...|..|++. ++++||.|. .|++.|..+..|..|+++|....
T Consensus         6 C~~~~~~C~~--C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            6 SGKRTQPCTY--CTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCCCEEECSS--SCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             CCCCCeeccc--cCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            4566777744  777777 7777777777 777777777 77777777777777777776544

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.4e-11  Score=84.41  Aligned_cols=45  Identities=33%  Similarity=0.544  Sum_probs=31.4

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      +|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            356667777777777777777777777777777777777776655

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.4e-11  Score=84.34  Aligned_cols=44  Identities=30%  Similarity=0.579  Sum_probs=31.0

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777665

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.5e-11  Score=84.32  Aligned_cols=45  Identities=33%  Similarity=0.516  Sum_probs=31.6

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466667777777777777777777777777777777777777655

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.3e-11  Score=84.65  Aligned_cols=45  Identities=29%  Similarity=0.555  Sum_probs=32.9

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366677777777777777777777777777777777777777665

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.4e-11  Score=84.47  Aligned_cols=45  Identities=24%  Similarity=0.388  Sum_probs=32.4

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366677777777777777777777777777777777777777665

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=2e-11  Score=82.87  Aligned_cols=44  Identities=32%  Similarity=0.579  Sum_probs=31.4

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45667777777777777777777777777777777777777665

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.5e-11  Score=84.33  Aligned_cols=45  Identities=27%  Similarity=0.508  Sum_probs=32.1

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      +|++.|+++++|.|.+|++.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            366667777777777777777777777777777777777777665

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.3e-11  Score=84.70  Aligned_cols=44  Identities=32%  Similarity=0.561  Sum_probs=27.8

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.13  E-value=2.3e-11  Score=83.50  Aligned_cols=44  Identities=34%  Similarity=0.528  Sum_probs=29.4

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666666666666666666666666666666666666666655

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1.6e-11  Score=84.22  Aligned_cols=45  Identities=27%  Similarity=0.556  Sum_probs=32.0

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      +|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            366667777777777777777777777777777777777777665

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.13  E-value=1.4e-11  Score=84.56  Aligned_cols=45  Identities=31%  Similarity=0.591  Sum_probs=29.4

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      +|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            355666666666666666666666666666666666666666554

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.8e-11  Score=83.00  Aligned_cols=45  Identities=31%  Similarity=0.566  Sum_probs=31.3

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      +|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356667777777777777777777777777777777777776655

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.12  E-value=1.5e-11  Score=84.41  Aligned_cols=44  Identities=25%  Similarity=0.415  Sum_probs=25.0

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            45555555555555555555555555555555555555555544

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.7e-11  Score=84.20  Aligned_cols=45  Identities=33%  Similarity=0.704  Sum_probs=32.7

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      +|++.|+++++|.|.+|++.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            466677777777777777777777777777777777777777665

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.6e-11  Score=84.13  Aligned_cols=44  Identities=27%  Similarity=0.459  Sum_probs=27.1

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55556666666666666666666666666666666666666554

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.5e-11  Score=84.18  Aligned_cols=44  Identities=32%  Similarity=0.557  Sum_probs=28.8

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666666666666666666666666666666666666666555

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.1e-11  Score=83.59  Aligned_cols=44  Identities=30%  Similarity=0.563  Sum_probs=24.8

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            44555555555555555555555555555555555555555544

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.1e-11  Score=82.77  Aligned_cols=45  Identities=31%  Similarity=0.544  Sum_probs=31.7

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      +|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            356667777777777777777777777777777777777777665

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.7e-11  Score=83.89  Aligned_cols=44  Identities=30%  Similarity=0.582  Sum_probs=26.5

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55556666666666666666666666666666666666665554

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.11  E-value=1.3e-11  Score=84.47  Aligned_cols=44  Identities=30%  Similarity=0.496  Sum_probs=25.3

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555555544

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.6e-11  Score=83.16  Aligned_cols=44  Identities=30%  Similarity=0.470  Sum_probs=26.6

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666554

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.3e-11  Score=82.84  Aligned_cols=44  Identities=25%  Similarity=0.449  Sum_probs=33.3

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56677777777777777777777777777777777777777665

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.5e-11  Score=84.31  Aligned_cols=44  Identities=32%  Similarity=0.594  Sum_probs=29.9

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56666666666676677666666666667666666666666655

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.1e-11  Score=83.50  Aligned_cols=44  Identities=27%  Similarity=0.507  Sum_probs=26.5

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55556666666666666666666666666666666666666554

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.9e-11  Score=83.94  Aligned_cols=44  Identities=32%  Similarity=0.555  Sum_probs=24.1

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555555555555555555555555555555555555555444

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.7e-11  Score=83.16  Aligned_cols=44  Identities=23%  Similarity=0.377  Sum_probs=25.3

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44555555555555555555555555555555555555555544

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.9e-11  Score=83.01  Aligned_cols=44  Identities=32%  Similarity=0.576  Sum_probs=25.7

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45555555566666666666666666666555655555555544

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.9e-11  Score=82.88  Aligned_cols=44  Identities=32%  Similarity=0.591  Sum_probs=28.6

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666666666666666666666666666666666666666554

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.2e-11  Score=83.47  Aligned_cols=44  Identities=27%  Similarity=0.527  Sum_probs=26.1

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            45555566666666666666666666666666666666655554

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=1.7e-11  Score=83.89  Aligned_cols=44  Identities=25%  Similarity=0.412  Sum_probs=27.1

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55556666666666666666666666666666666666666554

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.4e-11  Score=83.27  Aligned_cols=44  Identities=34%  Similarity=0.585  Sum_probs=27.1

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55556666666666666666666666666666666666666554

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2.9e-11  Score=82.77  Aligned_cols=45  Identities=29%  Similarity=0.466  Sum_probs=29.7

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            355666666666666666666666666666666666666666655

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=1.8e-11  Score=84.05  Aligned_cols=44  Identities=25%  Similarity=0.449  Sum_probs=26.6

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55556666666666666666666666666666666666666554

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=3.7e-11  Score=82.36  Aligned_cols=44  Identities=23%  Similarity=0.303  Sum_probs=30.7

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|..|+++|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56666777777777777777777777777777777777776655

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=2.7e-11  Score=83.06  Aligned_cols=44  Identities=27%  Similarity=0.469  Sum_probs=24.7

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555555555555555555555555555555555555555544

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2e-11  Score=83.72  Aligned_cols=45  Identities=29%  Similarity=0.504  Sum_probs=28.3

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      +|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            355666666666666666666666666666666666666666543

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.4e-11  Score=83.30  Aligned_cols=45  Identities=27%  Similarity=0.573  Sum_probs=32.8

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|+++++|.|..|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            366677777777777777777777777777777777777777665

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=3.6e-11  Score=82.39  Aligned_cols=44  Identities=27%  Similarity=0.503  Sum_probs=28.9

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666655

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.09  E-value=2.8e-11  Score=82.84  Aligned_cols=44  Identities=32%  Similarity=0.533  Sum_probs=25.2

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555555544

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.2e-11  Score=82.16  Aligned_cols=44  Identities=25%  Similarity=0.445  Sum_probs=31.4

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777665

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.07  E-value=1.1e-10  Score=84.38  Aligned_cols=56  Identities=43%  Similarity=0.943  Sum_probs=51.1

Q ss_pred             ceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHH-hhhcCC
Q psy17740        262 RIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHK-RTHTGE  321 (384)
Q Consensus       262 k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~-r~Htge  321 (384)
                      ++|.|..  |++.|.....|.+|++.|+++++|.|.+  |++.|.+...|.+|+ +.|.++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSCSEECTT--TCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCC--CccccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHHHHHHcCCc
Confidence            4689955  9999999999999999999999999965  999999999999996 688765

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.5e-11  Score=82.50  Aligned_cols=44  Identities=30%  Similarity=0.589  Sum_probs=26.0

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55555556666666666666666666666666665555555544

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.8e-11  Score=82.98  Aligned_cols=44  Identities=27%  Similarity=0.458  Sum_probs=28.5

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666555

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.07  E-value=4.4e-11  Score=82.05  Aligned_cols=44  Identities=23%  Similarity=0.441  Sum_probs=27.2

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=6e-11  Score=81.38  Aligned_cols=44  Identities=32%  Similarity=0.590  Sum_probs=32.3

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677777777777777777777777777777777777777654

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.06  E-value=3.3e-11  Score=85.92  Aligned_cols=51  Identities=16%  Similarity=0.270  Sum_probs=37.5

Q ss_pred             CCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCC
Q psy17740        302 GRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAI  352 (384)
Q Consensus       302 gk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~  352 (384)
                      ++.|.....|..|++.|+++++|.|.+|++.|.....|..|+++|+++++|
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            456666777777777777777777777777777777777777777777665

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1.7e-11  Score=84.04  Aligned_cols=44  Identities=30%  Similarity=0.558  Sum_probs=22.6

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555444

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.06  E-value=3.6e-11  Score=82.52  Aligned_cols=45  Identities=42%  Similarity=0.744  Sum_probs=41.7

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSS--SCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788899999999965  99999999999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.4e-11  Score=82.54  Aligned_cols=45  Identities=40%  Similarity=0.707  Sum_probs=41.5

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.....|.+|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCC--cCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            4788899999999965  99999999999999999999999999988

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.05  E-value=4.1e-11  Score=82.12  Aligned_cols=45  Identities=31%  Similarity=0.500  Sum_probs=41.8

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|.++++|.|..  |++.|.....|.+|++.|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSS--SCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCC--CCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            4788999999999955  99999999999999999999999999988

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.6e-11  Score=82.29  Aligned_cols=45  Identities=44%  Similarity=0.691  Sum_probs=41.5

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCC--CChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4788899999999965  99999999999999999999999999988

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.4e-11  Score=81.84  Aligned_cols=45  Identities=36%  Similarity=0.671  Sum_probs=41.7

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.....|.+|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSS--SCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCc--cChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4788999999999965  99999999999999999999999999988

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.9e-11  Score=81.12  Aligned_cols=44  Identities=25%  Similarity=0.533  Sum_probs=25.9

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHH-HhcCCCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVK-RHSKDGAITPSNI  357 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r-~H~~e~~~~c~~C  357 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|++ +|+++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4555555566666666666666666666655 5655555555544

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.9e-11  Score=81.31  Aligned_cols=45  Identities=38%  Similarity=0.716  Sum_probs=41.8

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTT--TCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCC--CCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            4788899999999965  99999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.1e-11  Score=82.01  Aligned_cols=45  Identities=40%  Similarity=0.634  Sum_probs=41.7

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTT--TCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788899999999965  99999999999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.04  E-value=5.8e-11  Score=81.45  Aligned_cols=44  Identities=45%  Similarity=0.721  Sum_probs=40.9

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      |+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSS--SCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCc--cCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            778899999999965  99999999999999999999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.8e-11  Score=81.79  Aligned_cols=45  Identities=33%  Similarity=0.652  Sum_probs=41.6

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSS--SCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCC--CChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788999999999965  99999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.04  E-value=3.7e-11  Score=82.24  Aligned_cols=45  Identities=36%  Similarity=0.572  Sum_probs=41.6

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4788899999999965  99999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.04  E-value=4.1e-11  Score=82.11  Aligned_cols=45  Identities=42%  Similarity=0.713  Sum_probs=41.3

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSS--SCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCC--CcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4788899999999965  99999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.6e-11  Score=81.32  Aligned_cols=45  Identities=40%  Similarity=0.650  Sum_probs=41.6

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|+++|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTT--TTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCC--CCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            4788899999999965  99999999999999999999999999988

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.8e-11  Score=82.17  Aligned_cols=45  Identities=38%  Similarity=0.694  Sum_probs=41.5

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETT--TTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCC--cChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788899999999965  99999999999999999999999999988

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.1e-11  Score=81.52  Aligned_cols=45  Identities=44%  Similarity=0.839  Sum_probs=41.7

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.....|.+|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSS--SCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCC--CChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4788999999999965  99999999999999999999999999988

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.7e-11  Score=81.49  Aligned_cols=45  Identities=40%  Similarity=0.645  Sum_probs=41.3

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      .|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSS--SCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3788899999999965  99999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.9e-11  Score=82.21  Aligned_cols=45  Identities=38%  Similarity=0.648  Sum_probs=41.2

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.....|.+|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788899999999965  99999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.5e-11  Score=81.08  Aligned_cols=44  Identities=45%  Similarity=0.686  Sum_probs=41.1

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      |+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTT--TCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCC--CCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            778899999999965  99999999999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.3e-11  Score=80.95  Aligned_cols=44  Identities=34%  Similarity=0.603  Sum_probs=41.1

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      |+++|+++++|.|.+  |++.|.+...|.+|+++|+++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSS--SCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcc--cCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            678899999999955  99999999999999999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.1e-11  Score=81.01  Aligned_cols=44  Identities=41%  Similarity=0.633  Sum_probs=41.1

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      |+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSS--SCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCc--cChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            778899999999965  99999999999999999999999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7e-11  Score=80.94  Aligned_cols=45  Identities=40%  Similarity=0.678  Sum_probs=41.5

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSS--SCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCc--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788899999999965  99999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.5e-11  Score=81.45  Aligned_cols=45  Identities=44%  Similarity=0.733  Sum_probs=41.4

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      .|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSS--SCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCC--CCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            3788899999999965  99999999999999999999999999988

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.03  E-value=7.9e-11  Score=78.96  Aligned_cols=41  Identities=27%  Similarity=0.595  Sum_probs=28.5

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITP  354 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c  354 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            45666777777777777777777777777777777766666

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=5.5e-11  Score=80.70  Aligned_cols=44  Identities=36%  Similarity=0.555  Sum_probs=40.2

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      |+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSS--SSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            677899999999965  99999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.8e-11  Score=82.28  Aligned_cols=45  Identities=40%  Similarity=0.767  Sum_probs=41.1

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTT--TCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCC--CCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4788899999999965  99999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.3e-11  Score=82.02  Aligned_cols=45  Identities=44%  Similarity=0.718  Sum_probs=41.0

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSS--SCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            4778899999999965  99999999999999999999999999987

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.7e-11  Score=80.61  Aligned_cols=43  Identities=33%  Similarity=0.546  Sum_probs=33.0

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      +|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            3667777777778877888888777787887777777777775

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=4.6e-11  Score=81.87  Aligned_cols=45  Identities=38%  Similarity=0.694  Sum_probs=41.1

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSS--SCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCc--CCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            4778899999999965  99999999999999999999999999987

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.3e-10  Score=77.77  Aligned_cols=41  Identities=24%  Similarity=0.541  Sum_probs=31.0

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITP  354 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c  354 (384)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            56677777777777777777777777777777777777766

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.1e-10  Score=80.14  Aligned_cols=42  Identities=24%  Similarity=0.514  Sum_probs=32.0

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            667777777777777777777777777777777777777775

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7.3e-11  Score=80.73  Aligned_cols=45  Identities=44%  Similarity=0.793  Sum_probs=41.9

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.....|.+|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTT--TCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4788999999999965  99999999999999999999999999988

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.5e-11  Score=80.51  Aligned_cols=44  Identities=34%  Similarity=0.700  Sum_probs=33.4

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSN  356 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~  356 (384)
                      +|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46677777777888778888887777888877777777777753

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.02  E-value=1.1e-10  Score=79.96  Aligned_cols=43  Identities=35%  Similarity=0.604  Sum_probs=33.4

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      +|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677777778888888888888888888888888877777775

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=4.4e-11  Score=82.07  Aligned_cols=45  Identities=33%  Similarity=0.567  Sum_probs=41.4

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.....|.+|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSS--SCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCc--CCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4788899999999965  99999999999999999999999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=6.9e-11  Score=80.96  Aligned_cols=44  Identities=39%  Similarity=0.631  Sum_probs=40.9

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      |+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSS--SCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCC--ccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            778899999999965  99999999999999999999999999988

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=4.6e-11  Score=81.75  Aligned_cols=45  Identities=33%  Similarity=0.539  Sum_probs=41.4

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.....|.+|++.|+++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDE--CGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTT--TCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCC--cCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4788899999999955  99999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7.4e-11  Score=80.82  Aligned_cols=45  Identities=38%  Similarity=0.720  Sum_probs=41.4

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSS--SCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4788899999999965  99999999999999999999999999987

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.3e-10  Score=79.62  Aligned_cols=42  Identities=26%  Similarity=0.632  Sum_probs=31.8

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566777777777777777777777777777777777777774

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.02  E-value=7.3e-11  Score=80.74  Aligned_cols=45  Identities=38%  Similarity=0.680  Sum_probs=41.6

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      .|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSS--SCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCc--cccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4788999999999965  99999999999999999999999999988

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7.5e-11  Score=80.77  Aligned_cols=45  Identities=36%  Similarity=0.691  Sum_probs=41.1

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|.++++|.|.+  |++.|.+...|.+|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSE--CGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCC--CCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            4778899999999965  99999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7.1e-11  Score=80.91  Aligned_cols=45  Identities=42%  Similarity=0.731  Sum_probs=41.1

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTT--TCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4778899999999965  99999999999999999999999999987

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.7e-11  Score=80.10  Aligned_cols=43  Identities=30%  Similarity=0.615  Sum_probs=30.1

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      +|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3566677777777777777777777777777777777777664

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8.7e-11  Score=80.56  Aligned_cols=43  Identities=33%  Similarity=0.721  Sum_probs=34.8

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      +|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677788888888888888888888888888888888888775

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.4e-10  Score=79.36  Aligned_cols=44  Identities=27%  Similarity=0.610  Sum_probs=33.8

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSN  356 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~  356 (384)
                      .|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36777777888888888888888888888888888777777753

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7.1e-11  Score=81.02  Aligned_cols=45  Identities=36%  Similarity=0.605  Sum_probs=41.3

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccc--cCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4788899999999965  99999999999999999999999999987

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=9.4e-11  Score=79.52  Aligned_cols=42  Identities=26%  Similarity=0.585  Sum_probs=32.5

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITP  354 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c  354 (384)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            466777777788888888888887788888877777777776

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=4.3e-11  Score=81.99  Aligned_cols=45  Identities=40%  Similarity=0.714  Sum_probs=41.7

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.....|.+|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTT--TCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788899999999965  99999999999999999999999999988

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=8.3e-11  Score=80.43  Aligned_cols=45  Identities=36%  Similarity=0.590  Sum_probs=41.1

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4778899999999955  99999999999999999999999999987

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=9.2e-11  Score=80.32  Aligned_cols=42  Identities=29%  Similarity=0.608  Sum_probs=27.3

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            556666666666666666666666666666666666666654

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.7e-11  Score=81.04  Aligned_cols=45  Identities=40%  Similarity=0.748  Sum_probs=41.2

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.....|.+|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSS--SCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCc--CCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4778899999999955  99999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=9.6e-11  Score=80.23  Aligned_cols=44  Identities=36%  Similarity=0.677  Sum_probs=40.4

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      |+++|.++++|.|.+  |++.|.....|.+|++.|+++++|.|.+|
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCC--CCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            678899999999965  99999999999999999999999999987

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.3e-10  Score=79.60  Aligned_cols=42  Identities=31%  Similarity=0.619  Sum_probs=28.1

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            556666666666666666666666666666666666666664

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1e-10  Score=80.23  Aligned_cols=43  Identities=33%  Similarity=0.667  Sum_probs=27.7

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      +|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3556666666666666666666666666666666666666664

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.1e-10  Score=80.03  Aligned_cols=42  Identities=31%  Similarity=0.612  Sum_probs=29.3

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      |++.|+++++|.|.+|++.|.+...|..|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            566677777777777777777777777777777777766664

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.2e-10  Score=79.67  Aligned_cols=42  Identities=29%  Similarity=0.613  Sum_probs=29.5

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            566677777777777777777777777777777777766664

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.3e-10  Score=79.53  Aligned_cols=42  Identities=33%  Similarity=0.537  Sum_probs=29.2

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            566666777777777777777777777777777777766664

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=9.8e-11  Score=80.18  Aligned_cols=45  Identities=27%  Similarity=0.389  Sum_probs=40.8

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      .|+++|.++++|.|.+  |++.|.....|.+|++.|+++++|+|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRE--CGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTT--TCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccc--cChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3678899999999965  99999999999999999999999999987

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.1e-10  Score=79.98  Aligned_cols=43  Identities=33%  Similarity=0.567  Sum_probs=32.2

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4667777777777777777777777777777777777777764

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.7e-11  Score=81.03  Aligned_cols=45  Identities=38%  Similarity=0.673  Sum_probs=41.0

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSS--SCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788899999999965  99999999999999999999999999876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=8.6e-11  Score=80.71  Aligned_cols=44  Identities=34%  Similarity=0.665  Sum_probs=40.5

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      |+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTT--TTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            678899999999965  99999999999999999999999999987

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2e-10  Score=78.74  Aligned_cols=43  Identities=28%  Similarity=0.556  Sum_probs=33.0

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3667777777788888888888888888887778777777775

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=9.5e-11  Score=80.26  Aligned_cols=45  Identities=42%  Similarity=0.799  Sum_probs=41.8

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETT--TTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788999999999965  99999999999999999999999999988

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.4e-10  Score=79.35  Aligned_cols=42  Identities=33%  Similarity=0.638  Sum_probs=29.0

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            566666777777777777777777777777777776666664

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.99  E-value=1.1e-10  Score=79.95  Aligned_cols=45  Identities=33%  Similarity=0.480  Sum_probs=40.9

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3678899999999965  99999999999999999999999999987

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.4e-10  Score=79.25  Aligned_cols=43  Identities=33%  Similarity=0.584  Sum_probs=30.4

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      +|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3566677777777777777777777777777777777777664

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1.7e-10  Score=77.96  Aligned_cols=42  Identities=24%  Similarity=0.527  Sum_probs=31.1

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITP  354 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c  354 (384)
                      +|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            366677777777777777777777777777777777777766

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.98  E-value=3e-10  Score=77.43  Aligned_cols=42  Identities=31%  Similarity=0.669  Sum_probs=30.4

Q ss_pred             hhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCC
Q psy17740        317 THTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIG  358 (384)
Q Consensus       317 ~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg  358 (384)
                      .|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            466777777777777777777777777777777777777765

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=9.9e-11  Score=80.06  Aligned_cols=43  Identities=28%  Similarity=0.589  Sum_probs=29.7

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3566677777777777777777777777777777777766664

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.5e-10  Score=79.22  Aligned_cols=43  Identities=28%  Similarity=0.527  Sum_probs=29.4

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      +|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3566666777777777777777777777777777776666664

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.3e-10  Score=79.70  Aligned_cols=42  Identities=36%  Similarity=0.654  Sum_probs=27.1

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            455666666666666666666666666666666666666664

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=7.7e-11  Score=80.72  Aligned_cols=44  Identities=34%  Similarity=0.659  Sum_probs=40.6

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      |+++|.++++|.|..  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         3 H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETT--TTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCC--CCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            778899999999955  99999999999999999999999999988

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.6e-10  Score=78.18  Aligned_cols=41  Identities=22%  Similarity=0.458  Sum_probs=28.3

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITP  354 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c  354 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            56666666777777777777777777777766766666665

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.7e-10  Score=79.04  Aligned_cols=43  Identities=35%  Similarity=0.698  Sum_probs=34.5

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|+++++|.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677788888888888888888888888888888888887775

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.7e-10  Score=79.05  Aligned_cols=42  Identities=31%  Similarity=0.657  Sum_probs=28.3

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            556666666666666666666666666666666666666664

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=9e-11  Score=80.36  Aligned_cols=45  Identities=44%  Similarity=0.725  Sum_probs=40.8

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         2 ~h~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETT--TTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCC--CCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            4778899999999965  99999999999999999999999999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.1e-10  Score=80.09  Aligned_cols=44  Identities=39%  Similarity=0.663  Sum_probs=39.7

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      |+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSS--SCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcc--cCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            677899999999955  99999999999999999999999999987

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.2e-10  Score=78.79  Aligned_cols=41  Identities=32%  Similarity=0.598  Sum_probs=30.2

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITP  354 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c  354 (384)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            66677777777777777777777777777777777777766

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.4e-10  Score=77.75  Aligned_cols=41  Identities=32%  Similarity=0.631  Sum_probs=31.5

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITP  354 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c  354 (384)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56677777777787788888777777778777777777765

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.97  E-value=3.3e-10  Score=80.73  Aligned_cols=46  Identities=33%  Similarity=0.675  Sum_probs=25.5

Q ss_pred             hcCCCccccccCCCCCccCChHHHHHHHh-hhcCCCccccCccCcccCC
Q psy17740        288 HTGERPFLCQWTGCGRRFSRSDELSRHKR-THTGEKKFGCSICNRRFMR  335 (384)
Q Consensus       288 H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r-~Htgekpf~C~~C~k~F~~  335 (384)
                      |.++++|.|.+  |++.|.....|.+|++ .|+++++|.|.+|++.|.+
T Consensus         7 ~~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCC--CCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            44555555533  5555555555555554 5555555555555555543

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.97  E-value=2e-10  Score=76.83  Aligned_cols=41  Identities=24%  Similarity=0.498  Sum_probs=31.0

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITP  354 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c  354 (384)
                      |++.|+++++|.|.+|++.|.+...|..|+++|+++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56677777777777777777777777777777777777765

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.5e-10  Score=79.34  Aligned_cols=45  Identities=40%  Similarity=0.638  Sum_probs=41.4

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHh-hhcCCCccccCcc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKR-THTGEKKFGCSIC  329 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r-~Htgekpf~C~~C  329 (384)
                      .|+++|.++++|.|.+  |++.|.....|.+|++ .|+++++|.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSS--SCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCc--cCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            3778899999999965  9999999999999999 9999999999988

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.7e-10  Score=79.02  Aligned_cols=43  Identities=28%  Similarity=0.558  Sum_probs=25.1

Q ss_pred             HhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        315 KRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       315 ~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      ++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3455555666666666666666666666666666666655544

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=7.7e-11  Score=78.90  Aligned_cols=41  Identities=24%  Similarity=0.573  Sum_probs=25.1

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITP  354 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c  354 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            45556666666666666666666666666666666665554

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.6e-10  Score=79.01  Aligned_cols=42  Identities=31%  Similarity=0.652  Sum_probs=25.6

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            555566666666666666666666666666666666666554

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.2e-10  Score=78.46  Aligned_cols=43  Identities=30%  Similarity=0.529  Sum_probs=28.0

Q ss_pred             HhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        315 KRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       315 ~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      ++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|..|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3456666666666666666666666666666666666666655

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.6e-10  Score=77.48  Aligned_cols=41  Identities=29%  Similarity=0.615  Sum_probs=26.4

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITP  354 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c  354 (384)
                      |+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45566666666666666666666666666666666666654

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.3e-10  Score=79.64  Aligned_cols=43  Identities=35%  Similarity=0.569  Sum_probs=33.8

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677788888888888888888888888888888888877774

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.5e-10  Score=79.18  Aligned_cols=43  Identities=28%  Similarity=0.509  Sum_probs=30.9

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      +|++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3666777777777777777777777777777777777777764

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.1e-10  Score=78.63  Aligned_cols=44  Identities=41%  Similarity=0.690  Sum_probs=39.5

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      |+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSS--SCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCc--CCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            678899999999965  99999999999999999999999999875

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.2e-10  Score=78.49  Aligned_cols=42  Identities=31%  Similarity=0.635  Sum_probs=25.4

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445566666666666666666666666666666666665553

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=5.6e-10  Score=79.48  Aligned_cols=47  Identities=23%  Similarity=0.398  Sum_probs=44.0

Q ss_pred             hhcCCCccccCccCcccCChHHHHHHHH-HhcCCCCCCCCCCCCCccc
Q psy17740        317 THTGEKKFGCSICNRRFMRSDHLAKHVK-RHSKDGAITPSNIGTPSNV  363 (384)
Q Consensus       317 ~Htgekpf~C~~C~k~F~~~s~L~~H~r-~H~~e~~~~c~~Cg~~~~~  363 (384)
                      .|.++++|.|.+|++.|.+...|.+|++ +|+++++|.|..||+.|..
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            5788999999999999999999999997 8999999999999999864

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=4.1e-10  Score=76.38  Aligned_cols=41  Identities=17%  Similarity=0.332  Sum_probs=31.2

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITP  354 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c  354 (384)
                      |++.|+++++|.|.+|++.|.+...|..|+++|+++++|.|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            56677777777777777777777777777777777777776

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=2.1e-10  Score=78.63  Aligned_cols=42  Identities=26%  Similarity=0.418  Sum_probs=27.7

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcC-CCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSK-DGAITPS  355 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~-e~~~~c~  355 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|++ +++|.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            55666666666666666666666666666666666 6666664

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=2.5e-10  Score=77.40  Aligned_cols=41  Identities=24%  Similarity=0.483  Sum_probs=26.7

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITP  354 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c  354 (384)
                      |++.|+++++|.|.+|++.|.+...|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            55666666666666666666666666666666666666665

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=7.4e-10  Score=81.98  Aligned_cols=59  Identities=20%  Similarity=0.459  Sum_probs=52.6

Q ss_pred             CCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCc
Q psy17740        260 RRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK  323 (384)
Q Consensus       260 ~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekp  323 (384)
                      ..++|.|..  |++.|. ...|..|+++ +++++|.|.. .|++.|..+..|..|++.|...++
T Consensus         7 ~~~~~~C~~--C~k~f~-~~~L~~H~~~-~~~~p~~C~~-~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            7 GKRTQPCTY--CTKEFV-FDTIQSHQYQ-CPRLPVACPN-QCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCEEECSS--SCCEEE-HHHHHHHHHH-CSSSEEECTT-CCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCeeccc--cCCccC-HHHHHHHHHH-cCCcCccCCc-ccCcccccHHHHHHHHHhhcccCc
Confidence            457899965  999999 9999999999 9999999950 499999999999999999987654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=2.8e-11  Score=90.34  Aligned_cols=69  Identities=22%  Similarity=0.390  Sum_probs=58.9

Q ss_pred             hhhccCCCCCCCCCCceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCcccc
Q psy17740        247 KIKKSNKPATNDPRRRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGC  326 (384)
Q Consensus       247 ~lk~h~~~~~~~~~~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C  326 (384)
                      .|..|.+.+   .++++|.|..  |++.|.....|..       +++|.|..  |++.|.....|.+|++.|+++++|.|
T Consensus         5 ~l~~H~~~h---~~~~~~~C~~--C~k~f~~~~~l~~-------~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~~C   70 (73)
T 2ctu_A            5 SSGKRQKIH---LGDRSQKCSK--CGIIFIRRSTLSR-------RKTPMCEK--CRKDSCQEAALNKDEGNESGKKTSGP   70 (73)
T ss_dssp             SCCCCCCCC---CCCSEEECSS--SCCEEECCCCCCC-------SSSCCCHH--HHHTCSCCCSSCCCSSCCCCCCCSSC
T ss_pred             hHHHHHHHh---CCCCCeeCCc--ccchhCCHHHhCc-------CCCCCCCC--CChhhcCHHHHHHHHHhhcCCCCCCC
Confidence            345555543   3458999965  9999999998886       78999966  99999999999999999999999999


Q ss_pred             Ccc
Q psy17740        327 SIC  329 (384)
Q Consensus       327 ~~C  329 (384)
                      .+|
T Consensus        71 ~~C   73 (73)
T 2ctu_A           71 SSG   73 (73)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            988

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=6.6e-10  Score=76.16  Aligned_cols=41  Identities=24%  Similarity=0.544  Sum_probs=32.0

Q ss_pred             HhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        315 KRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       315 ~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      ++.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            45677778888888888888888888888888888777775

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.9e-10  Score=76.60  Aligned_cols=42  Identities=21%  Similarity=0.467  Sum_probs=30.5

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITP  354 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c  354 (384)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|+++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            366677777777777777777777777777777777777665

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.5e-10  Score=77.37  Aligned_cols=42  Identities=26%  Similarity=0.540  Sum_probs=32.8

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITP  354 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c  354 (384)
                      +|+++|+++++|.|.+|++.|.+...|.+|+++|+++++|.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            467777778888888888888888888888888887777776

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.91  E-value=5e-10  Score=77.57  Aligned_cols=41  Identities=24%  Similarity=0.447  Sum_probs=20.9

Q ss_pred             hcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCC
Q psy17740        318 HTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIG  358 (384)
Q Consensus       318 Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg  358 (384)
                      |.++++|.|.+|++.|.+...|.+|+++|+++++|.|..||
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            34444555555555555555555555555555555555554

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.7e-10  Score=77.74  Aligned_cols=42  Identities=43%  Similarity=0.673  Sum_probs=19.6

Q ss_pred             hhhcCCCccccC--ccCcccCChHHHHHHHHHhcCCCCCCCCCC
Q psy17740        316 RTHTGEKKFGCS--ICNRRFMRSDHLAKHVKRHSKDGAITPSNI  357 (384)
Q Consensus       316 r~Htgekpf~C~--~C~k~F~~~s~L~~H~r~H~~e~~~~c~~C  357 (384)
                      +.|+++++|.|.  .|++.|.+...|.+|+++|+++++|.|..|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            344444444444  444444444444444444444444444433

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.90  E-value=3.9e-11  Score=88.35  Aligned_cols=53  Identities=17%  Similarity=0.401  Sum_probs=35.1

Q ss_pred             HHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHH
Q psy17740        282 KAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHL  339 (384)
Q Consensus       282 ~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L  339 (384)
                      ..|++.|+++++|.|..  ||+.|.....|.   +.|+++++|.|.+|++.|....++
T Consensus         3 ~~h~~~H~~~k~~~C~~--C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPV--CSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCSSSCCSSSEEECSS--SCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhHHHHcCCCCCccCCC--CCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            34666677777777744  777777666664   567777777777777777655443

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.89  E-value=4.2e-10  Score=75.32  Aligned_cols=42  Identities=38%  Similarity=0.745  Sum_probs=37.6

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccC
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS  327 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~  327 (384)
                      |+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSE--CGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSS--SCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCC--cChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            567899999999955  999999999999999999999999985

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.9e-10  Score=77.13  Aligned_cols=44  Identities=43%  Similarity=0.801  Sum_probs=39.8

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCS--SCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4788899999999965  9999999999999999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.2e-10  Score=76.86  Aligned_cols=44  Identities=39%  Similarity=0.707  Sum_probs=39.5

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSS--SCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCC--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788899999999955  9999999999999999999999999974

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.88  E-value=4.1e-10  Score=80.10  Aligned_cols=52  Identities=19%  Similarity=0.158  Sum_probs=48.2

Q ss_pred             CCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccc
Q psy17740        272 GKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFG  325 (384)
Q Consensus       272 gk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~  325 (384)
                      ++.|.....|..|++.|+++++|.|..  |++.|.....|.+|+++|+|++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPI--CYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTT--TCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCC--CCcccCCHHHHHHHHHHhccCCCCC
Confidence            577888899999999999999999965  9999999999999999999999874

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=3.7e-10  Score=77.16  Aligned_cols=44  Identities=39%  Similarity=0.694  Sum_probs=38.2

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|+++++|.|.+  |++.|.....|.+|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTT--SCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccc--cCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            4778889999999955  9999999999999999999999999864

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.6e-10  Score=76.85  Aligned_cols=44  Identities=43%  Similarity=0.826  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSS--SCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4788899999999965  9999999999999999999999999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.4e-10  Score=76.87  Aligned_cols=43  Identities=40%  Similarity=0.670  Sum_probs=37.9

Q ss_pred             HHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        285 MRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       285 ~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         4 ~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSS--SCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcc--cCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45788999999955  99999999999999999999999999887

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.5e-10  Score=76.38  Aligned_cols=44  Identities=41%  Similarity=0.750  Sum_probs=39.3

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSS--SCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCC--CCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=4.9e-10  Score=76.74  Aligned_cols=43  Identities=42%  Similarity=0.714  Sum_probs=37.8

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      |+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|++
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSS--SCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            778899999999955  9999999999999999999999999864

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.87  E-value=9e-11  Score=86.39  Aligned_cols=53  Identities=15%  Similarity=0.251  Sum_probs=47.7

Q ss_pred             HHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchhh
Q psy17740        311 LSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRN  366 (384)
Q Consensus       311 L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~  366 (384)
                      |..|++.|+++++|.|++|++.|.....|.   ++|+++++|.|..||+.|....+
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTT
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcc
Confidence            456899999999999999999999988886   88999999999999999986654

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.87  E-value=5e-10  Score=76.68  Aligned_cols=44  Identities=48%  Similarity=0.774  Sum_probs=38.4

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999874

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.1e-10  Score=74.09  Aligned_cols=42  Identities=26%  Similarity=0.535  Sum_probs=37.7

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccC
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS  327 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~  327 (384)
                      |+++|.++++|.|.+  |++.|.+...|.+|+++|+++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTT--TCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCC--CCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567899999999965  999999999999999999999999884

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.87  E-value=1.6e-09  Score=73.15  Aligned_cols=40  Identities=25%  Similarity=0.448  Sum_probs=28.5

Q ss_pred             hhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        316 RTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       316 r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      +.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            3566777777777777777777777777777777777664

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6e-10  Score=76.19  Aligned_cols=44  Identities=41%  Similarity=0.766  Sum_probs=39.4

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSS--SCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCC--CCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.3e-10  Score=76.06  Aligned_cols=44  Identities=39%  Similarity=0.722  Sum_probs=39.0

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      .|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTT--TCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3778899999999955  9999999999999999999999999874

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.8e-10  Score=76.34  Aligned_cols=43  Identities=42%  Similarity=0.611  Sum_probs=38.6

Q ss_pred             HHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        285 MRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       285 ~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      +++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|.+|
T Consensus         4 ~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSS--SCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46789999999965  99999999999999999999999999987

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.6e-10  Score=76.43  Aligned_cols=44  Identities=43%  Similarity=0.692  Sum_probs=38.8

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSS--SCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCc--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999874

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.9e-10  Score=75.98  Aligned_cols=43  Identities=35%  Similarity=0.683  Sum_probs=38.5

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      |+++|.++++|.|.+  |++.|.+...|.+|+++|+++++|.|+.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCSS--SCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            678899999999955  9999999999999999999999999863

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.1e-10  Score=76.15  Aligned_cols=44  Identities=39%  Similarity=0.749  Sum_probs=38.4

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999874

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.2e-10  Score=76.09  Aligned_cols=44  Identities=41%  Similarity=0.656  Sum_probs=38.4

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      .|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSS--SCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCC--CCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            3778899999999965  9999999999999999999999999863

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6e-10  Score=76.05  Aligned_cols=44  Identities=43%  Similarity=0.827  Sum_probs=39.2

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|.++++|.|.+  |++.|.....|.+|++.|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSS--SCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCC--CChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            4778899999999955  9999999999999999999999999874

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.7e-10  Score=76.13  Aligned_cols=43  Identities=40%  Similarity=0.726  Sum_probs=38.9

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      |+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSS--SCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCC--CCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            678899999999965  9999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=5.9e-10  Score=76.11  Aligned_cols=44  Identities=43%  Similarity=0.690  Sum_probs=38.3

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSS--SCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3778899999999955  9999999999999999999999999864

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=4.7e-10  Score=76.82  Aligned_cols=44  Identities=39%  Similarity=0.742  Sum_probs=38.7

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSS--SCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEECcc--cCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999863

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.5e-10  Score=75.99  Aligned_cols=44  Identities=39%  Similarity=0.693  Sum_probs=39.4

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTT--TTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCc--CChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=5.9e-10  Score=76.11  Aligned_cols=44  Identities=41%  Similarity=0.747  Sum_probs=38.2

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      .|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTT--TCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCC--CCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3778899999999955  9999999999999999999999999874

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.85  E-value=1.2e-09  Score=74.41  Aligned_cols=42  Identities=36%  Similarity=0.698  Sum_probs=36.5

Q ss_pred             hhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccC
Q psy17740        287 THTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICN  330 (384)
Q Consensus       287 ~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~  330 (384)
                      .|+++++|.|..  |++.|.+...|.+|+++|+++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETT--TTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCC--CCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            578888999955  999999999999999999999999999886

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=8e-10  Score=76.01  Aligned_cols=46  Identities=59%  Similarity=1.033  Sum_probs=41.8

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCcc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSIC  329 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C  329 (384)
                      |.++|+++++|.|.++.|++.|.....|.+|++.|+++++|+|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4578999999999633699999999999999999999999999988

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7.4e-10  Score=75.80  Aligned_cols=44  Identities=41%  Similarity=0.704  Sum_probs=39.3

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSS--SCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=4.6e-10  Score=76.63  Aligned_cols=44  Identities=41%  Similarity=0.764  Sum_probs=38.6

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|.++++|.|.+  |++.|.....|.+|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSS--SCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999864

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7.2e-10  Score=74.81  Aligned_cols=43  Identities=35%  Similarity=0.637  Sum_probs=39.1

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccC
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS  327 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~  327 (384)
                      +|+++|+++++|.|.+  |++.|.....|.+|++.|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTT--TCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCC--CCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4788899999999965  999999999999999999999999985

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.85  E-value=1.2e-09  Score=75.63  Aligned_cols=42  Identities=29%  Similarity=0.586  Sum_probs=29.5

Q ss_pred             hcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCc
Q psy17740        288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNR  331 (384)
Q Consensus       288 H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k  331 (384)
                      |.++++|.|.+  |++.|.....|.+|+++|+++++|.|.+|++
T Consensus         7 ~~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETT--TTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCC--CCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            55666777744  7777777777777777777777777777764

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=8.9e-10  Score=75.40  Aligned_cols=44  Identities=36%  Similarity=0.623  Sum_probs=38.6

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTT--TCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3678899999999955  9999999999999999999999999874

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=8.2e-10  Score=74.53  Aligned_cols=43  Identities=35%  Similarity=0.639  Sum_probs=38.5

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccC
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS  327 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~  327 (384)
                      +|+++|.++++|.|.+  |++.|.....|.+|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTT--TCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCC--CCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4778899999999965  999999999999999999999999985

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.3e-10  Score=89.33  Aligned_cols=67  Identities=25%  Similarity=0.412  Sum_probs=58.7

Q ss_pred             hhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCC
Q psy17740        279 SHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       279 s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      ..|..|++.|.+++++.|.+  |++.|. ...|..|+ .|.++++|.|+.|++.|.+ ..|..|+++|.+++
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~--C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQH--CDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSS--SCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHHHBTTBS
T ss_pred             hHHHhhCcccCCCcccCCcc--cChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHHHccCCc
Confidence            45778888899999999966  999994 89999999 8999999999999998885 89999999988764

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=5e-10  Score=74.84  Aligned_cols=41  Identities=34%  Similarity=0.651  Sum_probs=38.1

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCcccc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGC  326 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C  326 (384)
                      |+++|.++++|.|.+  |++.|.....|.+|++.|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTT--TTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCC--ccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            778899999999965  99999999999999999999999988

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=4.8e-10  Score=76.76  Aligned_cols=44  Identities=39%  Similarity=0.640  Sum_probs=38.3

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETT--TTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcc--cChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999863

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=8.3e-10  Score=75.21  Aligned_cols=41  Identities=27%  Similarity=0.537  Sum_probs=27.1

Q ss_pred             HhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy17740        315 KRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPS  355 (384)
Q Consensus       315 ~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~  355 (384)
                      .+.|+++++|.|.+|++.|.+...|.+|+++|+++++|.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            34566666666666666666666666666666666666663

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.1e-09  Score=75.03  Aligned_cols=43  Identities=40%  Similarity=0.729  Sum_probs=38.2

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      |+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|+.
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTT--TCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            567899999999965  9999999999999999999999999863

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=6.7e-10  Score=75.10  Aligned_cols=43  Identities=37%  Similarity=0.710  Sum_probs=38.8

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccC
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS  327 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~  327 (384)
                      .|+++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETT--TTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCC--CCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3788899999999965  999999999999999999999999985

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=7.2e-10  Score=75.02  Aligned_cols=43  Identities=30%  Similarity=0.578  Sum_probs=38.3

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccC
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS  327 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~  327 (384)
                      +|+++|.++++|.|.+  |++.|.....|.+|++.|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSK--CDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSS--SSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCC--CCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4778899999999955  999999999999999999999999884

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.4e-09  Score=72.38  Aligned_cols=38  Identities=21%  Similarity=0.552  Sum_probs=22.3

Q ss_pred             hhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCC
Q psy17740        317 THTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITP  354 (384)
Q Consensus       317 ~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c  354 (384)
                      .|+++++|.|.+|++.|.+...|..|+++|+++++|.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            45555566666666666666666666655655555554

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.1e-09  Score=73.35  Aligned_cols=41  Identities=34%  Similarity=0.668  Sum_probs=37.5

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCcccc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGC  326 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C  326 (384)
                      |+++|.++++|.|..  |++.|.....|.+|++.|+++++|+|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSS--SCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCC--CCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            677899999999955  99999999999999999999999988

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=1.3e-09  Score=73.77  Aligned_cols=43  Identities=16%  Similarity=0.354  Sum_probs=38.8

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccC
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS  327 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~  327 (384)
                      +|+++|.++++|.|..  |++.|.....|.+|++.|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSK--CQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTT--TCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4788899999999955  999999999999999999999999985

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1e-09  Score=75.09  Aligned_cols=44  Identities=41%  Similarity=0.702  Sum_probs=38.9

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|.++++|.|.+  |++.|.+...|.+|+++|+++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSS--SCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999863

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.79  E-value=1.3e-09  Score=72.76  Aligned_cols=41  Identities=27%  Similarity=0.593  Sum_probs=36.0

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCcccc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGC  326 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C  326 (384)
                      |+++|.++++|.|.+  |++.|.....|.+|++.|+++++|.|
T Consensus         2 H~~~H~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSS--SCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCC--CCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            567888999999955  99999999999999999999999987

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=1.1e-09  Score=74.88  Aligned_cols=43  Identities=33%  Similarity=0.391  Sum_probs=38.1

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcC-CCccccCc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTG-EKKFGCSI  328 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htg-ekpf~C~~  328 (384)
                      |+++|.++++|.|.+  |++.|.....|.+|+++|++ +++|.|.+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNK--CEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSS--SCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CccccCCCCCEECcC--CCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            678899999999965  99999999999999999999 99999864

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=9.8e-10  Score=73.50  Aligned_cols=41  Identities=32%  Similarity=0.598  Sum_probs=36.6

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCcccc
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGC  326 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C  326 (384)
                      |+++|.++++|.|..  |++.|.....|.+|++.|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCET--CGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTT--TCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCC--cChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            667889999999955  99999999999999999999999987

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=6.5e-10  Score=75.98  Aligned_cols=43  Identities=40%  Similarity=0.617  Sum_probs=38.0

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccC
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS  327 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~  327 (384)
                      +|+++|+++++|.|.+  |++.|.....|.+|++.|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcc--cChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999965  999999999999999999999999886

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.1e-09  Score=74.63  Aligned_cols=44  Identities=39%  Similarity=0.694  Sum_probs=38.9

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +|+++|.++++|.|.+  |++.|.....|.+|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETT--TTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCC--CChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999965  9999999999999999999999999863

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=1.9e-09  Score=73.00  Aligned_cols=42  Identities=26%  Similarity=0.394  Sum_probs=37.1

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccC
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS  327 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~  327 (384)
                      |++.|.++++|.|..  |++.|.....|.+|+++|+++++|.|.
T Consensus         3 h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQE--CGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTT--TCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            567889999999955  999999999999999999999999884

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=3.6e-09  Score=72.38  Aligned_cols=42  Identities=38%  Similarity=0.612  Sum_probs=35.0

Q ss_pred             HHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        285 MRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       285 ~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      ++.|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|..
T Consensus         4 ~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSS--SCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCC--CCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            45688888899855  9999999899999988898888888863

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.1e-09  Score=72.01  Aligned_cols=43  Identities=30%  Similarity=0.567  Sum_probs=38.0

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccC
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS  327 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~  327 (384)
                      +|+++|+++++|.|.+  |++.|.....|.+|++.|+++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNE--CGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCC--CCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            4778899999999955  999999999999999999999999873

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.71  E-value=4.9e-09  Score=67.93  Aligned_cols=36  Identities=53%  Similarity=0.774  Sum_probs=29.8

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      |++.|+++++|.|.+|++.|.+...|.+|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            677888888888888888888888888888888764

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=1.6e-09  Score=73.22  Aligned_cols=43  Identities=26%  Similarity=0.507  Sum_probs=37.5

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccC
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCS  327 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~  327 (384)
                      +|+++|+++++|.|.+  |++.|.+...|.+|++.|+++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETT--TTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcc--cCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999955  999999999999999999999999873

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.71  E-value=7.8e-09  Score=69.74  Aligned_cols=41  Identities=29%  Similarity=0.464  Sum_probs=34.5

Q ss_pred             HhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        286 RTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       286 r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +.|+++++|.|..  |++.|.....|.+|++.|+++++|.|.+
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNE--CDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSS--SCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCC--CCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            4578888899955  9999999999999998999999988864

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=3.1e-09  Score=72.27  Aligned_cols=42  Identities=40%  Similarity=0.696  Sum_probs=33.7

Q ss_pred             HHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        285 MRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       285 ~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      .++|.++++|.|.+  |++.|.+...|.+|++.|+++++|.|++
T Consensus         4 ~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETT--TTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCC--CCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            35678888888855  8888888888888888888888888863

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=7.8e-09  Score=66.93  Aligned_cols=36  Identities=14%  Similarity=0.547  Sum_probs=30.0

Q ss_pred             hhhcCCCccccCccCcccCChHHHHHHHHHhcCCCC
Q psy17740        316 RTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGA  351 (384)
Q Consensus       316 r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~  351 (384)
                      +.|+++++|.|.+|++.|.+...|..|+++|+++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            568888888888888888888888888888887753

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.67  E-value=1.2e-08  Score=67.21  Aligned_cols=37  Identities=27%  Similarity=0.529  Sum_probs=25.8

Q ss_pred             hcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCC
Q psy17740        318 HTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITP  354 (384)
Q Consensus       318 Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c  354 (384)
                      |+++++|.|.+|++.|.+...|..|+++|+++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4566777777777777777777777777777776654

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1.2e-08  Score=67.86  Aligned_cols=39  Identities=33%  Similarity=0.654  Sum_probs=33.3

Q ss_pred             HhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCcccc
Q psy17740        286 RTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGC  326 (384)
Q Consensus       286 r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C  326 (384)
                      ++|.++++|.|.+  |++.|.....|.+|++.|+++++|.|
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQE--CGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSS--SCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCC--CCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            3588888999955  99999999999999989999988887

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.60  E-value=2.5e-08  Score=63.47  Aligned_cols=34  Identities=21%  Similarity=0.560  Sum_probs=27.3

Q ss_pred             hhcCCCccccCccCcccCChHHHHHHHHHhcCCC
Q psy17740        317 THTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       317 ~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      +|+++++|.|.+|++.|.+...|..|+++|++++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            3677888888888888888888888888887765

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.59  E-value=3.2e-08  Score=75.13  Aligned_cols=38  Identities=24%  Similarity=0.385  Sum_probs=17.6

Q ss_pred             cCCCccccccCCCCCccCChHHHHHHH-hhhcCCCcccc
Q psy17740        289 TGERPFLCQWTGCGRRFSRSDELSRHK-RTHTGEKKFGC  326 (384)
Q Consensus       289 ~~ekp~~C~~~~Cgk~F~~~~~L~~H~-r~Htgekpf~C  326 (384)
                      +++|||.|.+.+|+++|.+..+|.+|+ ++|++++||.|
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            444444444334444444444444443 34444444444

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.55  E-value=3.1e-08  Score=63.17  Aligned_cols=33  Identities=30%  Similarity=0.620  Sum_probs=25.4

Q ss_pred             hcCCCccccCccCcccCChHHHHHHHHHhcCCC
Q psy17740        318 HTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       318 Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      |+++++|.|.+|++.|.+...|.+|+++|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            667777888888888888778888877777665

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.53  E-value=7.4e-08  Score=73.10  Aligned_cols=43  Identities=16%  Similarity=0.271  Sum_probs=37.8

Q ss_pred             hhcCCCccccCc--cCcccCChHHHHHHH-HHhcCCCCCCCCCCCC
Q psy17740        317 THTGEKKFGCSI--CNRRFMRSDHLAKHV-KRHSKDGAITPSNIGT  359 (384)
Q Consensus       317 ~Htgekpf~C~~--C~k~F~~~s~L~~H~-r~H~~e~~~~c~~Cg~  359 (384)
                      .++|+|||+|.+  |+++|.+.++|.+|+ ++|+++++|.|..-+.
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~~~   66 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEVEE   66 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSCCC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccccc
Confidence            467899999976  999999999999998 6899999999976443

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.52  E-value=8.7e-10  Score=87.51  Aligned_cols=69  Identities=16%  Similarity=0.236  Sum_probs=49.7

Q ss_pred             HHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCc
Q psy17740        285 MRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPS  361 (384)
Q Consensus       285 ~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~  361 (384)
                      .++|+++++|.|.+  |++.|.....|.+|+++|+++++|+|..|.    +...|..|+++|.+  .+.....+.+|
T Consensus        17 ~~~H~~~kpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~~   85 (88)
T 1x6f_A           17 NGPRLQNSTYQCKH--CDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG--AFADFKQESGP   85 (88)
T ss_dssp             CCSCCCCSCEECSS--SCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC--SSSCCCCCCCC
T ss_pred             ccccCCCCCCcCCC--CCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc--ccccccccCCC
Confidence            45688888999955  999999999999999899888899887665    34556667777765  33334444443

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=6.3e-09  Score=79.80  Aligned_cols=66  Identities=14%  Similarity=0.099  Sum_probs=58.5

Q ss_pred             HHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchhhHHHHHHHHhhc
Q psy17740        309 DELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVAFNMMVTN  377 (384)
Q Consensus       309 ~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~~~hl~~~~~~  377 (384)
                      ..|..|++.|.++++|.|.+|++.|. ...|..|+ .|.++++|.|..|++.+. ...+..|+..+...
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            45778999999999999999999995 89999999 899999999999999876 48999998876654

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.50  E-value=5.1e-09  Score=83.00  Aligned_cols=51  Identities=12%  Similarity=0.312  Sum_probs=45.4

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccch
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVL  364 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~  364 (384)
                      |.++|+++++|.|.+|++.|.+...|..|+++|+++++|.|..|.....+.
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~~~~~~   66 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRKQLL   66 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSCCCCCC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhhHHHHH
Confidence            356799999999999999999999999999999999999999888765443

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=5.3e-08  Score=62.98  Aligned_cols=35  Identities=20%  Similarity=0.497  Sum_probs=28.7

Q ss_pred             hhhcCCCccccCccCcccCCh-HHHHHHHHHhcCCC
Q psy17740        316 RTHTGEKKFGCSICNRRFMRS-DHLAKHVKRHSKDG  350 (384)
Q Consensus       316 r~Htgekpf~C~~C~k~F~~~-s~L~~H~r~H~~e~  350 (384)
                      ++|+++++|.|.+|++.|.+. ..|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            467888888888888888888 88888888888753

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=7.9e-08  Score=61.54  Aligned_cols=34  Identities=18%  Similarity=0.453  Sum_probs=28.0

Q ss_pred             hhcCCCccccCccCcccCChHHHHHHHHHhcCCC
Q psy17740        317 THTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       317 ~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      .|+++++|.|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            4778888888888888888888888888887753

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=7.3e-08  Score=61.92  Aligned_cols=34  Identities=29%  Similarity=0.590  Sum_probs=27.6

Q ss_pred             hhcCCCccccCccCcccCChHHHHHHHHHhcCCC
Q psy17740        317 THTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       317 ~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      .|+++++|.|.+|++.|.+...|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            5778888888888888888888888888887653

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=9.4e-08  Score=63.83  Aligned_cols=32  Identities=19%  Similarity=0.292  Sum_probs=25.2

Q ss_pred             hcCCCccccCc--cCcccCChHHHHHHHHHhcCC
Q psy17740        318 HTGEKKFGCSI--CNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       318 Htgekpf~C~~--C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      |++++||+|.+  |+++|.+++.|.+|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56778888875  888888888888888888765

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.47  E-value=1.2e-07  Score=60.10  Aligned_cols=32  Identities=50%  Similarity=0.872  Sum_probs=23.1

Q ss_pred             CccccCccCcccCChHHHHHHHHHhcCCCCCC
Q psy17740        322 KKFGCSICNRRFMRSDHLAKHVKRHSKDGAIT  353 (384)
Q Consensus       322 kpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~  353 (384)
                      +||.|.+|++.|.....|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46777777777777777777777777777664

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=5e-08  Score=63.49  Aligned_cols=34  Identities=21%  Similarity=0.475  Sum_probs=28.4

Q ss_pred             hhhcCCCccccCccCcccCChHHHHHH-HHHhcCC
Q psy17740        316 RTHTGEKKFGCSICNRRFMRSDHLAKH-VKRHSKD  349 (384)
Q Consensus       316 r~Htgekpf~C~~C~k~F~~~s~L~~H-~r~H~~e  349 (384)
                      +.|++++||.|.+|++.|.+...|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            568888888888888888888888888 7888764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=1.2e-07  Score=60.62  Aligned_cols=34  Identities=26%  Similarity=0.581  Sum_probs=27.9

Q ss_pred             hhcCCCccccCccCcccCChHHHHHHHHHhcCCC
Q psy17740        317 THTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       317 ~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      .|+++++|.|.+|++.|.+...|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4677888888888888888888888888888764

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.45  E-value=1e-07  Score=62.00  Aligned_cols=35  Identities=34%  Similarity=0.626  Sum_probs=25.4

Q ss_pred             hcCCCccccC--ccCcccCChHHHHHHHHHhcCCCCC
Q psy17740        318 HTGEKKFGCS--ICNRRFMRSDHLAKHVKRHSKDGAI  352 (384)
Q Consensus       318 Htgekpf~C~--~C~k~F~~~s~L~~H~r~H~~e~~~  352 (384)
                      |+++++|.|.  .|++.|.+...|.+|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5667777777  4777777777777777777777665

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=6.8e-08  Score=62.05  Aligned_cols=33  Identities=21%  Similarity=0.515  Sum_probs=25.3

Q ss_pred             hhcCCCccccCccCcccCChHHHHHHHHHhcCC
Q psy17740        317 THTGEKKFGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       317 ~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      .|+++++|.|.+|++.|.+...|.+|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            467777788888888888888888888777765

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.42  E-value=1.3e-07  Score=62.03  Aligned_cols=37  Identities=22%  Similarity=0.453  Sum_probs=27.9

Q ss_pred             hcCCCccccccCCCCCccCChHHHHHHHhhhcCCCcccc
Q psy17740        288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGC  326 (384)
Q Consensus       288 H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C  326 (384)
                      |+++++|.|.+  |++.|.....|..|+++|+++++|.|
T Consensus         1 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSF--CKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTT--TCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCC--CCcccCCHHHHHHHHHHcCCCcccee
Confidence            56777888854  88888888888888888888887765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.40  E-value=1.4e-07  Score=61.28  Aligned_cols=37  Identities=43%  Similarity=0.907  Sum_probs=26.6

Q ss_pred             hcCCCccccccCCCCCccCChHHHHHHHhhhcCCCcc
Q psy17740        288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKF  324 (384)
Q Consensus       288 H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf  324 (384)
                      |+++++|.|.++.|++.|.+...|.+|++.|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5667777775335777777777777777777777765

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=2.1e-07  Score=59.67  Aligned_cols=34  Identities=26%  Similarity=0.582  Sum_probs=27.2

Q ss_pred             hhcCCCccccCccCcccCChHHHHHHHHHhcCCC
Q psy17740        317 THTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       317 ~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      .|.++++|.|.+|++.|.+...|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4667888888888888888888888888887753

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.34  E-value=1.7e-07  Score=64.91  Aligned_cols=35  Identities=23%  Similarity=0.562  Sum_probs=25.6

Q ss_pred             hhcCCCccccCccCcccCChHHHHHHHH-HhcCCCC
Q psy17740        317 THTGEKKFGCSICNRRFMRSDHLAKHVK-RHSKDGA  351 (384)
Q Consensus       317 ~Htgekpf~C~~C~k~F~~~s~L~~H~r-~H~~e~~  351 (384)
                      +|+++++|.|.+|++.|.+...|.+|++ +|+++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4777888888888888888888888888 7776643

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.32  E-value=1.9e-07  Score=60.19  Aligned_cols=36  Identities=44%  Similarity=0.753  Sum_probs=32.1

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      |+++|.++++|.|..  |++.|.....|.+|++.|+++
T Consensus         2 H~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCC--CCcccCcHHHHHHHHHHhccC
Confidence            678899999999955  999999999999999999874

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=1.4e-07  Score=60.78  Aligned_cols=36  Identities=22%  Similarity=0.474  Sum_probs=29.6

Q ss_pred             HhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCc
Q psy17740        286 RTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK  323 (384)
Q Consensus       286 r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekp  323 (384)
                      ++|.++++|.|.+  |++.|.....|.+|++.|++++|
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPV--CEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETT--TTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCC--CCCccCCHHHHHHHHHHHcCCCC
Confidence            4688888888855  88888888888888888888764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=3.7e-07  Score=60.87  Aligned_cols=34  Identities=21%  Similarity=0.312  Sum_probs=23.0

Q ss_pred             hcCCCccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       288 H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      |++++||.|.+..|++.|.++..|.+|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            5667777774334777777777777777777664

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.29  E-value=3.9e-07  Score=59.12  Aligned_cols=34  Identities=24%  Similarity=0.571  Sum_probs=26.4

Q ss_pred             hhcCCCccccCc--cCcccCChHHHHHHHHHhcCCC
Q psy17740        317 THTGEKKFGCSI--CNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       317 ~Htgekpf~C~~--C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      .|+++++|.|.+  |++.|.+.+.|.+|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            367788888874  8888888888888888887753

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.29  E-value=9.2e-08  Score=65.85  Aligned_cols=38  Identities=24%  Similarity=0.493  Sum_probs=27.7

Q ss_pred             HHHhhhcCCCccccC--ccCcccCChHHHHHHHHHhcCCC
Q psy17740        313 RHKRTHTGEKKFGCS--ICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       313 ~H~r~Htgekpf~C~--~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      .|...|+++++|.|.  .|++.|.+.+.|.+|+++|++++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            445567777888885  58888888888888888777653

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.28  E-value=1e-06  Score=65.58  Aligned_cols=55  Identities=18%  Similarity=0.541  Sum_probs=42.9

Q ss_pred             eecccCCCCCcccChhhHHHHHH-hhcCCC------ccccccCCCCCccCChHHHHHHHhhh
Q psy17740        264 FECNYENCGKNYFKSSHLKAHMR-THTGER------PFLCQWTGCGRRFSRSDELSRHKRTH  318 (384)
Q Consensus       264 f~C~~e~Cgk~F~~~s~L~~H~r-~H~~ek------p~~C~~~~Cgk~F~~~~~L~~H~r~H  318 (384)
                      |.|.|..|++.|.....|..|+. .|.+.+      .|.|.|.+|++.+.....|..|++..
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            56888888888888888888874 676655      68888888888887778888887754

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.25  E-value=9.9e-08  Score=65.69  Aligned_cols=40  Identities=23%  Similarity=0.571  Sum_probs=31.8

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCC
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK  322 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgek  322 (384)
                      .|+..|.++++|.|.|..|++.|.+...|.+|++.|++++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3455688888999964469999999999999988888764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.24  E-value=6e-07  Score=56.80  Aligned_cols=34  Identities=26%  Similarity=0.573  Sum_probs=26.4

Q ss_pred             hcCCCccccccCCCCCccCChHHHHHHHhhhcCCCc
Q psy17740        288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK  323 (384)
Q Consensus       288 H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekp  323 (384)
                      |.++++|.|.+  |++.|.+...|.+|++.|++++|
T Consensus         2 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCAL--CLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSS--SCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCC--CcchhCCHHHHHHHHHHHcCCCC
Confidence            67778888854  88888888888888888877764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.21  E-value=7.5e-07  Score=56.54  Aligned_cols=35  Identities=31%  Similarity=0.695  Sum_probs=27.3

Q ss_pred             hhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCc
Q psy17740        287 THTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKK  323 (384)
Q Consensus       287 ~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekp  323 (384)
                      +|.++++|.|.+  |++.|.....|.+|++.|++++|
T Consensus         1 ~H~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRI--CLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSS--SCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHHcCCCCC
Confidence            367788888854  88888888888888888887764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.20  E-value=1.5e-06  Score=65.16  Aligned_cols=42  Identities=17%  Similarity=0.382  Sum_probs=30.4

Q ss_pred             hhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCC
Q psy17740        317 THTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGT  359 (384)
Q Consensus       317 ~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~  359 (384)
                      .|.+++||.|.+|++.|.+...|.+|+++|+++. ..+..++.
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~~   48 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYIDL   48 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCCC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-cccccccC
Confidence            3667788888888888888888888888888753 34455544

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.18  E-value=8.3e-07  Score=53.69  Aligned_cols=29  Identities=28%  Similarity=0.666  Sum_probs=22.5

Q ss_pred             CCccccCccCcccCChHHHHHHHHHhcCC
Q psy17740        321 EKKFGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       321 ekpf~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      +++|.|..|++.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            46778888888888888888888877765

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.18  E-value=1.3e-06  Score=52.58  Aligned_cols=28  Identities=36%  Similarity=0.975  Sum_probs=22.4

Q ss_pred             CccccCccCcccCChHHHHHHHHHhcCC
Q psy17740        322 KKFGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       322 kpf~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      ++|.|.+|++.|.+...|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4678888888888888888888888765

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.17  E-value=6.4e-07  Score=59.08  Aligned_cols=26  Identities=23%  Similarity=0.396  Sum_probs=20.0

Q ss_pred             hcCCCccccCccCcccCChHHHHHHH
Q psy17740        318 HTGEKKFGCSICNRRFMRSDHLAKHV  343 (384)
Q Consensus       318 Htgekpf~C~~C~k~F~~~s~L~~H~  343 (384)
                      +.|++||.|.+|+++|.+.++|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            45677788888888888877777777

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.17  E-value=1.3e-06  Score=55.26  Aligned_cols=32  Identities=38%  Similarity=0.527  Sum_probs=21.4

Q ss_pred             CccccccCCCCCccCChHHHHHHHhhhcCCCccc
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFG  325 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~  325 (384)
                      ++|.|..  |++.|.....|..|+++|+++++|.
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPE--CPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSS--SCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCC--CCchhCCHHHHHHHHHHhCCCCCCC
Confidence            3566743  7777777777777777777776664

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.14  E-value=1.2e-06  Score=56.80  Aligned_cols=35  Identities=31%  Similarity=0.759  Sum_probs=23.5

Q ss_pred             hcCCCccccccCCCCCccCChHHHHHHHhhhcCCC
Q psy17740        288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK  322 (384)
Q Consensus       288 H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgek  322 (384)
                      |+++++|.|.+..|++.|.....|.+|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            56677777743357777777777777777776653

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.12  E-value=1e-06  Score=53.20  Aligned_cols=28  Identities=50%  Similarity=0.946  Sum_probs=20.9

Q ss_pred             CccccCccCcccCChHHHHHHHHHhcCC
Q psy17740        322 KKFGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       322 kpf~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            4677777777777777777777777765

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.12  E-value=1.4e-06  Score=52.24  Aligned_cols=29  Identities=34%  Similarity=0.753  Sum_probs=23.0

Q ss_pred             CccccCccCcccCChHHHHHHHHHhcCCC
Q psy17740        322 KKFGCSICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       322 kpf~C~~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      ++|.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            46888888888888888888888887753

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.12  E-value=1.9e-06  Score=52.02  Aligned_cols=29  Identities=28%  Similarity=0.557  Sum_probs=23.0

Q ss_pred             CccccCccCcccCChHHHHHHHHHhcCCC
Q psy17740        322 KKFGCSICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       322 kpf~C~~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      ++|.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            46788888888888888888888887764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.11  E-value=1.6e-06  Score=52.11  Aligned_cols=29  Identities=28%  Similarity=0.652  Sum_probs=23.1

Q ss_pred             CccccCccCcccCChHHHHHHHHHhcCCC
Q psy17740        322 KKFGCSICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       322 kpf~C~~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      ++|.|.+|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            46888888888888888888888887753

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.09  E-value=1.1e-07  Score=59.80  Aligned_cols=30  Identities=47%  Similarity=0.800  Sum_probs=15.8

Q ss_pred             ccccCccCcccCChHHHHHHHHHhcCCCCC
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVKRHSKDGAI  352 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r~H~~e~~~  352 (384)
                      ||.|.+|++.|.+.+.|.+|+++|+++++|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            455555555555555555555555555443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.07  E-value=1.8e-06  Score=51.47  Aligned_cols=27  Identities=37%  Similarity=0.769  Sum_probs=21.7

Q ss_pred             CCccccCccCcccCChHHHHHHHHHhc
Q psy17740        321 EKKFGCSICNRRFMRSDHLAKHVKRHS  347 (384)
Q Consensus       321 ekpf~C~~C~k~F~~~s~L~~H~r~H~  347 (384)
                      +++|.|..|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            467888888888888888888888774

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.05  E-value=2.3e-06  Score=53.07  Aligned_cols=28  Identities=29%  Similarity=0.797  Sum_probs=18.3

Q ss_pred             CccccC--ccCcccCChHHHHHHHHHhcCC
Q psy17740        322 KKFGCS--ICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       322 kpf~C~--~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      ++|.|.  .|++.|.+...|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            566666  5666666666666666666654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=2.3e-06  Score=54.49  Aligned_cols=34  Identities=32%  Similarity=0.615  Sum_probs=25.2

Q ss_pred             hhcCCCccccccCCCCCccCChHHHHHHHhhhcCCC
Q psy17740        287 THTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK  322 (384)
Q Consensus       287 ~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgek  322 (384)
                      +|.++++|.|.+  |++.|.....|.+|++.|++++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQ--CSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSS--SSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCC--CCcccCCHHHHHHHHHHccCCC
Confidence            467777788854  8888888888888877777653

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.05  E-value=1.5e-06  Score=52.13  Aligned_cols=28  Identities=25%  Similarity=0.735  Sum_probs=20.6

Q ss_pred             CCccccCccCcccCChHHHHHHHHHhcC
Q psy17740        321 EKKFGCSICNRRFMRSDHLAKHVKRHSK  348 (384)
Q Consensus       321 ekpf~C~~C~k~F~~~s~L~~H~r~H~~  348 (384)
                      +++|.|.+|++.|.+...|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4577777777777777777777777653

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=1.8e-06  Score=55.17  Aligned_cols=34  Identities=21%  Similarity=0.405  Sum_probs=25.4

Q ss_pred             hhcCCCccccccCCCCCccCChHHHHHHHhhhcCCC
Q psy17740        287 THTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK  322 (384)
Q Consensus       287 ~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgek  322 (384)
                      .|.++++|.|.+  |++.|.....|.+|++.|++++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHI--CERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSS--SCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCC--CCCccCCHHHHHHHHHHhcCCC
Confidence            467777888854  8888888888888888777653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=1.6e-06  Score=55.73  Aligned_cols=34  Identities=29%  Similarity=0.645  Sum_probs=25.7

Q ss_pred             hhcCCCccccccCCCCCccCCh-HHHHHHHhhhcCCC
Q psy17740        287 THTGERPFLCQWTGCGRRFSRS-DELSRHKRTHTGEK  322 (384)
Q Consensus       287 ~H~~ekp~~C~~~~Cgk~F~~~-~~L~~H~r~Htgek  322 (384)
                      +|.++++|.|..  |++.|... ..|.+|++.|++++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPY--CDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSS--SSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCC--CChhhccCHHHHHHHHHhcCCCC
Confidence            577778888854  88888887 78888888877653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=2.1e-06  Score=54.84  Aligned_cols=34  Identities=26%  Similarity=0.550  Sum_probs=25.6

Q ss_pred             hhcCCCccccccCCCCCccCChHHHHHHHhhhcCCC
Q psy17740        287 THTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK  322 (384)
Q Consensus       287 ~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgek  322 (384)
                      .|.++++|.|.+  |++.|.....|.+|++.|++++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSL--CEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSS--SSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCC--CCchhCCHHHHHHHHHHhccCC
Confidence            467778888854  8888888888888888877653

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.03  E-value=2.5e-06  Score=52.61  Aligned_cols=28  Identities=39%  Similarity=0.928  Sum_probs=17.4

Q ss_pred             CccccC--ccCcccCChHHHHHHHHHhcCC
Q psy17740        322 KKFGCS--ICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       322 kpf~C~--~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      +||.|.  .|++.|.+...|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            356665  6666666666666666666654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.28  E-value=6.7e-07  Score=54.33  Aligned_cols=29  Identities=31%  Similarity=0.682  Sum_probs=22.7

Q ss_pred             CCccccCccCcccCChHHHHHHHHHhcCC
Q psy17740        321 EKKFGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       321 ekpf~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      +++|.|..|++.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            36788888888888888888888887765

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.27  E-value=7.1e-07  Score=54.06  Aligned_cols=28  Identities=29%  Similarity=0.745  Sum_probs=21.8

Q ss_pred             CccccCccCcccCChHHHHHHHHHhcCC
Q psy17740        322 KKFGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       322 kpf~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      ++|.|.+|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4678888888888888888888887765

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=3.8e-06  Score=53.40  Aligned_cols=34  Identities=29%  Similarity=0.687  Sum_probs=25.7

Q ss_pred             hhcCCCccccccCCCCCccCChHHHHHHHhhhcCCC
Q psy17740        287 THTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK  322 (384)
Q Consensus       287 ~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgek  322 (384)
                      .|.++++|.|..  |++.|.....|.+|++.|++++
T Consensus         3 ~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDM--CGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTT--TCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCc--CCCCcCchHHHHHHHHHhcCCC
Confidence            367778888854  8888888888888888887764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.00  E-value=1.5e-06  Score=52.05  Aligned_cols=27  Identities=19%  Similarity=0.516  Sum_probs=20.7

Q ss_pred             CCccccCccCcccCChHHHHHHHHHhc
Q psy17740        321 EKKFGCSICNRRFMRSDHLAKHVKRHS  347 (384)
Q Consensus       321 ekpf~C~~C~k~F~~~s~L~~H~r~H~  347 (384)
                      ++||.|.+|++.|.....|.+|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            467888888888888888888877763

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.98  E-value=2.7e-06  Score=50.42  Aligned_cols=26  Identities=27%  Similarity=0.815  Sum_probs=17.8

Q ss_pred             ccccCccCcccCChHHHHHHHHHhcC
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVKRHSK  348 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r~H~~  348 (384)
                      +|.|.+|++.|.+...|.+|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46677777777777777777777665

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.96  E-value=5.4e-06  Score=50.99  Aligned_cols=29  Identities=76%  Similarity=1.535  Sum_probs=17.2

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      ||.|.+..||+.|.....|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            56664224666666666666666666654

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.95  E-value=2.2e-06  Score=55.46  Aligned_cols=34  Identities=18%  Similarity=0.349  Sum_probs=27.0

Q ss_pred             HhhcCCCccccccCCCCCccCChHHHHHH-HhhhcCC
Q psy17740        286 RTHTGERPFLCQWTGCGRRFSRSDELSRH-KRTHTGE  321 (384)
Q Consensus       286 r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H-~r~Htge  321 (384)
                      ++|+++++|.|..  |++.|.....|.+| ++.|+++
T Consensus         2 ~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQ--CHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSS--SSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCC--CCcccCCHHHHHHHHHHHccCc
Confidence            4678888888844  88888888888888 7888764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.94  E-value=5.3e-06  Score=52.87  Aligned_cols=32  Identities=31%  Similarity=0.668  Sum_probs=21.2

Q ss_pred             hcCCCccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       288 H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      |.++++|.|.+  |++.|.....|.+|++.|+++
T Consensus         4 ~~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEY--CNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTT--TCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCC--CCceeCCHHHHHHHHHHhCCC
Confidence            55666677744  777777777777777666655

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.92  E-value=8.4e-06  Score=50.40  Aligned_cols=30  Identities=40%  Similarity=0.985  Sum_probs=17.7

Q ss_pred             CccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      ++|.|.+..|++.|.....|.+|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            456664224666666666666666666654

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.92  E-value=1.6e-05  Score=59.08  Aligned_cols=54  Identities=20%  Similarity=0.505  Sum_probs=48.3

Q ss_pred             cccccCCCCCccCChHHHHHHH-hhhcCCC------ccccC--ccCcccCChHHHHHHHHHhc
Q psy17740        294 FLCQWTGCGRRFSRSDELSRHK-RTHTGEK------KFGCS--ICNRRFMRSDHLAKHVKRHS  347 (384)
Q Consensus       294 ~~C~~~~Cgk~F~~~~~L~~H~-r~Htgek------pf~C~--~C~k~F~~~s~L~~H~r~H~  347 (384)
                      |.|.|.+|++.|.+...|..|+ +.|.+.+      .|.|.  .|++.+.....|..|++..|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            6799999999999999999997 5798766      79997  79999999999999999764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.89  E-value=5.1e-06  Score=57.28  Aligned_cols=35  Identities=29%  Similarity=0.719  Sum_probs=26.4

Q ss_pred             hhcCCCccccccCCCCCccCChHHHHHHHh-hhcCCCc
Q psy17740        287 THTGERPFLCQWTGCGRRFSRSDELSRHKR-THTGEKK  323 (384)
Q Consensus       287 ~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r-~Htgekp  323 (384)
                      +|+++++|.|.+  |++.|.....|.+|++ .|+++..
T Consensus         1 ~Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCC--cCcccCCHHHHHHHhhhhcCCCCC
Confidence            478888888855  8888888888888888 8887643

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.87  E-value=4.5e-06  Score=50.59  Aligned_cols=28  Identities=46%  Similarity=0.912  Sum_probs=18.6

Q ss_pred             CccccCccCcccCChHHHHHH-HHHhcCC
Q psy17740        322 KKFGCSICNRRFMRSDHLAKH-VKRHSKD  349 (384)
Q Consensus       322 kpf~C~~C~k~F~~~s~L~~H-~r~H~~e  349 (384)
                      ++|.|..|++.|.+...|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            356777777777777777777 4666654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.05  E-value=2.2e-06  Score=50.56  Aligned_cols=26  Identities=38%  Similarity=0.936  Sum_probs=20.6

Q ss_pred             CccccCccCcccCChHHHHHHHHHhc
Q psy17740        322 KKFGCSICNRRFMRSDHLAKHVKRHS  347 (384)
Q Consensus       322 kpf~C~~C~k~F~~~s~L~~H~r~H~  347 (384)
                      +||.|.+||+.|.+...|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            46888888888888888888887763

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.77  E-value=1.7e-06  Score=54.21  Aligned_cols=31  Identities=39%  Similarity=0.592  Sum_probs=21.2

Q ss_pred             CccccccCCCCCccCChHHHHHHHhhhcCCCcc
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKF  324 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf  324 (384)
                      ++|.|..  |++.|.....|.+|+++|+++++|
T Consensus         1 kp~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPA--CPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSS--SCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCC--CCcccCCHHHHHHHHHHHccCCCC
Confidence            3567743  777777777777777777777665

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.72  E-value=1.3e-05  Score=52.78  Aligned_cols=32  Identities=31%  Similarity=0.625  Sum_probs=22.4

Q ss_pred             hcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       288 H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      +.+++||.|.  .||+.|.++.+|.+|+       ||.|..
T Consensus         3 ~~gekp~~C~--~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCL--PCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEET--TTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECC--CCCCccCCHhHccCcC-------CeECcC
Confidence            4567777774  4777777777777776       666654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.69  E-value=3.8e-05  Score=57.43  Aligned_cols=32  Identities=22%  Similarity=0.492  Sum_probs=17.9

Q ss_pred             hcCCCccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       288 H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      |.+++||.|..  |++.|.+...|.+|+++|+++
T Consensus         8 ~~~ekpy~C~~--CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            8 LREAGILPCGL--CGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCCTT--TCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCccCcCCCC--CCCccCCHHHHHhhhhhhCCC
Confidence            44555555533  566665555555565555554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.67  E-value=2.6e-05  Score=46.78  Aligned_cols=28  Identities=39%  Similarity=0.928  Sum_probs=14.5

Q ss_pred             CccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      ++|.|..  |++.|.....|..|++.|+++
T Consensus         2 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDY--CGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTT--TCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCC--CCcccCCHHHHHHHHHHhccC
Confidence            4455533  555555555555555555543

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.65  E-value=3.6e-05  Score=45.92  Aligned_cols=27  Identities=48%  Similarity=1.009  Sum_probs=16.0

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      +|.|..  |++.|.....|..|++.|+++
T Consensus         2 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEV--CTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTT--TCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCC--CCcccCCHHHHHHHHHHhcCC
Confidence            456633  666666666666666666554

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.63  E-value=1.8e-05  Score=47.28  Aligned_cols=27  Identities=30%  Similarity=0.570  Sum_probs=18.7

Q ss_pred             CccccC--ccCcccCChHHHHHHHHHhcC
Q psy17740        322 KKFGCS--ICNRRFMRSDHLAKHVKRHSK  348 (384)
Q Consensus       322 kpf~C~--~C~k~F~~~s~L~~H~r~H~~  348 (384)
                      ++|.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            356777  777777777777777777653

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.61  E-value=3e-05  Score=46.39  Aligned_cols=27  Identities=41%  Similarity=0.720  Sum_probs=14.2

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      +|.|..  |++.|.....|..|++.|+++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPE--CPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSS--SSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCC--CCchhCCHHHHHHHHHHhcCC
Confidence            455532  555555555555555555544

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.57  E-value=4.9e-05  Score=45.49  Aligned_cols=28  Identities=29%  Similarity=0.617  Sum_probs=16.5

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhhcCCC
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTHTGEK  322 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~Htgek  322 (384)
                      +|.|..  |++.|.....|..|++.|++++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQY--CEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSS--SSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCC--CCCccCCHHHHHHHHHHHccCC
Confidence            456633  6666666666666666665543

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.54  E-value=4.3e-05  Score=45.36  Aligned_cols=27  Identities=22%  Similarity=0.646  Sum_probs=15.1

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      +|.|..  |++.|.....|..|++.|+++
T Consensus         2 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPH--CDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSS--CCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCC--CCcccCCHHHHHHHHHHhccC
Confidence            455533  566665555555565555554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.53  E-value=4.1e-05  Score=45.56  Aligned_cols=27  Identities=48%  Similarity=1.042  Sum_probs=13.2

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      +|.|..  |++.|.....|..|++.|+++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRE--CGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTT--TSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCC--CCCccCChhHHHHHHHHhcCC
Confidence            444532  555555555555555555443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.47  E-value=6e-05  Score=44.78  Aligned_cols=26  Identities=46%  Similarity=1.012  Sum_probs=14.6

Q ss_pred             CccccccCCCCCccCChHHHHHHHhhhc
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRTHT  319 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~Ht  319 (384)
                      ++|.|..  |++.|.....|..|++.|+
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSV--CGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSS--SCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCC--CCcccCCHHHHHHHHHhcC
Confidence            4555533  6666666666666655554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.56  E-value=2e-05  Score=47.38  Aligned_cols=27  Identities=44%  Similarity=0.931  Sum_probs=14.9

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      +|.|..  |++.|.....|..|++.|+++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVM--CGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            455533  555555555555555555544

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.42  E-value=7.6e-05  Score=44.41  Aligned_cols=27  Identities=33%  Similarity=0.929  Sum_probs=13.8

Q ss_pred             eeecccCCCCCcccChhhHHHHHHhhc
Q psy17740        263 IFECNYENCGKNYFKSSHLKAHMRTHT  289 (384)
Q Consensus       263 ~f~C~~e~Cgk~F~~~s~L~~H~r~H~  289 (384)
                      +|.|.++.|++.|.....|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            345542245555555555555555554

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.55  E-value=2.1e-05  Score=47.44  Aligned_cols=28  Identities=46%  Similarity=1.035  Sum_probs=15.6

Q ss_pred             CccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      ++|.|..  |++.|.....|..|++.|+++
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIH--CQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4555533  666666666666665555544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.41  E-value=9.5e-05  Score=43.38  Aligned_cols=26  Identities=38%  Similarity=0.842  Sum_probs=16.2

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhhcC
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTHTG  320 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~Htg  320 (384)
                      +|.|..  |++.|.....|.+|++.|++
T Consensus         1 ~~~C~~--C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGL--CERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSS--SCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCC--CCCcCCCHHHHHHHHHHcCC
Confidence            356643  66777666666666666654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.38  E-value=8.8e-05  Score=43.78  Aligned_cols=25  Identities=36%  Similarity=0.810  Sum_probs=12.0

Q ss_pred             CccccccCCCCCccCChHHHHHHHhhh
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRTH  318 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~H  318 (384)
                      ++|.|..  ||+.|.....|..|++.|
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSL--CPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSS--SSCEESSHHHHHHHHHHC
T ss_pred             cCccCCC--cChhhCCHHHHHHHHHHc
Confidence            3445522  555555555555554444

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.33  E-value=7.1e-05  Score=44.45  Aligned_cols=25  Identities=24%  Similarity=0.577  Sum_probs=12.9

Q ss_pred             CccccccCCCCCccCChHHHHHHHhhh
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRTH  318 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~H  318 (384)
                      ++|.|..  ||+.|.....|.+|++.|
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPL--CRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETT--TTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCC--CCcccCCHHHHHHHHHhc
Confidence            4455532  555555555555555544

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.32  E-value=0.00013  Score=43.85  Aligned_cols=27  Identities=41%  Similarity=0.943  Sum_probs=17.5

Q ss_pred             ccccccCCCCCccCChHHHHHH-HhhhcCC
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRH-KRTHTGE  321 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H-~r~Htge  321 (384)
                      +|.|..  |++.|.....|..| ++.|+++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGL--CNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTT--TCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcc--cCcccCChHHHHHHHHHHccCC
Confidence            566643  77777777777777 5666655

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.06  E-value=0.0001  Score=43.02  Aligned_cols=24  Identities=46%  Similarity=1.154  Sum_probs=12.4

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhh
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTH  318 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~H  318 (384)
                      +|.|..  ||+.|.....|..|++.|
T Consensus         2 p~~C~~--C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCER--CGKRFVQSSQLANHIRHH   25 (26)
Confidence            455533  555555555555555544

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.89  E-value=0.0015  Score=54.68  Aligned_cols=28  Identities=29%  Similarity=0.566  Sum_probs=19.4

Q ss_pred             hhcCCCccccCccCcccCChHHHHHHHH
Q psy17740        317 THTGEKKFGCSICNRRFMRSDHLAKHVK  344 (384)
Q Consensus       317 ~Htgekpf~C~~C~k~F~~~s~L~~H~r  344 (384)
                      .|+|+++|.|..|++.|.+...|..|++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            4666677777777777777777777754

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.60  E-value=0.0036  Score=52.57  Aligned_cols=77  Identities=18%  Similarity=0.354  Sum_probs=53.4

Q ss_pred             ceeecccCCCCCcccChhhHHHHH--HhhcCC-Ccccccc----CCCCCccCChHHHHHHHhhhcCCCccccCccCcccC
Q psy17740        262 RIFECNYENCGKNYFKSSHLKAHM--RTHTGE-RPFLCQW----TGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFM  334 (384)
Q Consensus       262 k~f~C~~e~Cgk~F~~~s~L~~H~--r~H~~e-kp~~C~~----~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~  334 (384)
                      +++.|.+  |+..|.+...+..|.  +.|... +.|.+..    ..=++.|....    +...+.+.+.|.|..|++.|.
T Consensus        31 ~~~~C~~--C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~  104 (127)
T 1zu1_A           31 SDTQCKV--CSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFS  104 (127)
T ss_dssp             CSSEETT--TTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECS
T ss_pred             CCCcCcC--CCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeC
Confidence            5689977  999999999999999  556543 4444421    00022332211    233456678899999999999


Q ss_pred             ChHHHHHHHH
Q psy17740        335 RSDHLAKHVK  344 (384)
Q Consensus       335 ~~s~L~~H~r  344 (384)
                      +...|..|..
T Consensus       105 s~~~~~~H~~  114 (127)
T 1zu1_A          105 SPVVAESHYI  114 (127)
T ss_dssp             SHHHHHHHHT
T ss_pred             CHHHHHHHHC
Confidence            9999999975

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.60  E-value=0.013  Score=51.01  Aligned_cols=85  Identities=18%  Similarity=0.294  Sum_probs=55.2

Q ss_pred             ceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHH
Q psy17740        262 RIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAK  341 (384)
Q Consensus       262 k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~  341 (384)
                      -...|...+|+..+. ...|..|.. .-..++..|+  +|+..+ ....|..|+...-..+...|+.|+..|.. ..|..
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~--~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~  154 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCP--QCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEI  154 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECT--TTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHH
T ss_pred             cccCCCCCCCCceec-HhHHHHHHh-cCCceeeECC--CCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHh
Confidence            345676567877654 456667763 3445667784  588777 45667788777777777788888877755 46778


Q ss_pred             HHHHhcCCCCC
Q psy17740        342 HVKRHSKDGAI  352 (384)
Q Consensus       342 H~r~H~~e~~~  352 (384)
                      |+..+.|+..+
T Consensus       155 H~~~~~~~~~~  165 (170)
T 3hcs_A          155 HDQNCPLALEH  165 (170)
T ss_dssp             HHTTCCC----
T ss_pred             HHHhCcChhhh
Confidence            88777776544

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=93.16  E-value=0.021  Score=47.70  Aligned_cols=29  Identities=31%  Similarity=0.465  Sum_probs=22.7

Q ss_pred             hhcCCCccccccCCCCCccCChHHHHHHHhh
Q psy17740        287 THTGERPFLCQWTGCGRRFSRSDELSRHKRT  317 (384)
Q Consensus       287 ~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~  317 (384)
                      -|+|+++|.|.+  |++.|.+...|..|+++
T Consensus        44 d~tGekpfyC~~--C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLA--CARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETT--TTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEccc--CcchhCCHHHHHHHHhh
Confidence            477888888855  88888888888888764

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.70  E-value=0.1  Score=36.00  Aligned_cols=24  Identities=25%  Similarity=0.438  Sum_probs=17.4

Q ss_pred             CccccCccCcccCChHHHHHHHHH
Q psy17740        322 KKFGCSICNRRFMRSDHLAKHVKR  345 (384)
Q Consensus       322 kpf~C~~C~k~F~~~s~L~~H~r~  345 (384)
                      .+|.|+.|++.|.....|+.||+-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            456777777777777777777774

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=91.75  E-value=0.1  Score=45.16  Aligned_cols=82  Identities=16%  Similarity=0.308  Sum_probs=61.0

Q ss_pred             CCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCCCCCCCCCCCCCccchhhHHHH
Q psy17740        291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKDGAITPSNIGTPSNVLRNANVA  370 (384)
Q Consensus       291 ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~~~~~~~~~h  370 (384)
                      .....|+..+|+..+. ...|..|.. .-..++..|+.|+..+ .+..|..|+...-..+...|..|+..+. ...+..|
T Consensus        80 ~l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H  155 (170)
T 3hcs_A           80 SLMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIH  155 (170)
T ss_dssp             TSEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHH
T ss_pred             hcccCCCCCCCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhH
Confidence            3457787668988766 456778874 3345778999999988 5568999998877888889999998764 4666777


Q ss_pred             HHHHhh
Q psy17740        371 FNMMVT  376 (384)
Q Consensus       371 l~~~~~  376 (384)
                      .+....
T Consensus       156 ~~~~~~  161 (170)
T 3hcs_A          156 DQNCPL  161 (170)
T ss_dssp             HTTCCC
T ss_pred             HHhCcC
Confidence            655444

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=91.73  E-value=0.11  Score=43.40  Aligned_cols=77  Identities=10%  Similarity=0.091  Sum_probs=53.2

Q ss_pred             CCccccccCCCCCccCChHHHHHHH--hhhcCC-CccccCcc------CcccCChHHHHHHHHHhcCCCCCCCCCCCCCc
Q psy17740        291 ERPFLCQWTGCGRRFSRSDELSRHK--RTHTGE-KKFGCSIC------NRRFMRSDHLAKHVKRHSKDGAITPSNIGTPS  361 (384)
Q Consensus       291 ekp~~C~~~~Cgk~F~~~~~L~~H~--r~Htge-kpf~C~~C------~k~F~~~s~L~~H~r~H~~e~~~~c~~Cg~~~  361 (384)
                      .+++.|.+  |+..|.+...+..|.  +.|... +.|.+..+      ++.|....    |...+.+.+.|.|..|...|
T Consensus        30 ~~~~~C~~--C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f  103 (127)
T 1zu1_A           30 FSDTQCKV--CSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTF  103 (127)
T ss_dssp             BCSSEETT--TTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEEC
T ss_pred             CCCCcCcC--CCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEe
Confidence            46789976  999999999999998  566532 34444211      22332211    22345677899999999999


Q ss_pred             cchhhHHHHHHH
Q psy17740        362 NVLRNANVAFNM  373 (384)
Q Consensus       362 ~~~~~~~~hl~~  373 (384)
                      +....+..|+..
T Consensus       104 ~s~~~~~~H~~g  115 (127)
T 1zu1_A          104 SSPVVAESHYIG  115 (127)
T ss_dssp             SSHHHHHHHHTS
T ss_pred             CCHHHHHHHHCC
Confidence            999988888764

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=82.10  E-value=1.1  Score=30.83  Aligned_cols=22  Identities=23%  Similarity=0.478  Sum_probs=11.3

Q ss_pred             eeecccCCCCCcccChhhHHHHHH
Q psy17740        263 IFECNYENCGKNYFKSSHLKAHMR  286 (384)
Q Consensus       263 ~f~C~~e~Cgk~F~~~s~L~~H~r  286 (384)
                      .|.|  +.|+..|.....|+.||+
T Consensus        12 ~~~C--PrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           12 RKIC--PRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCC--TTTCCCCSSHHHHHHHHH
T ss_pred             ceeC--CcccccccchHHHHhhhh
Confidence            4455  335555555555555554

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=81.03  E-value=1.2  Score=28.50  Aligned_cols=25  Identities=28%  Similarity=0.479  Sum_probs=18.2

Q ss_pred             ccccCccCcccCChHHHHHHHHHhc
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVKRHS  347 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r~H~  347 (384)
                      .|.|++|.+.|.....|..|-...|
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            3778888888888888888855433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	384
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	1e-13
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-06
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.004
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-13
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-09
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	3e-13
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-10
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-12
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-07
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	9e-12
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	6e-10
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-11
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	1e-08
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	4e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-11
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-10
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-11
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-09
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.001
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-11
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-05
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	1e-10
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	3e-09
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	0.001
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-10
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	2e-10
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-10
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-09
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	3e-10
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	1e-09
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	2e-09
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	6e-09
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	5e-09
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-08
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	6e-09
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	5e-06
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	5e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	6e-09
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	6e-08
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.002
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-08
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-07
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	8e-08
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-06
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-04
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	1e-05
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	2e-04
d1bhia_	38	g.37.1.1 (A:) Transactivation domain of cre-bp1/at	2e-05
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	4e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	5e-04
d1tf3a2	30	g.37.1.1 (A:41-70) Transcription factor IIIA, TFII	5e-04
d1tf3a2	30	g.37.1.1 (A:41-70) Transcription factor IIIA, TFII	0.003
d2epqa1	32	g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [	5e-04
d1tf3a1	31	g.37.1.1 (A:1-40) Transcription factor IIIA, TFIII	0.002
d2glia2	33	g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo	0.002
d2j7ja1	28	g.37.1.1 (A:1-28) Transcription factor IIIA, TFIII	0.002

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.0 bits (153), Expect = 1e-13
 Identities = 9/47 (19%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 276 FKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
                +  +++    ++ F C + GC + F R   +  H +TH  ++
Sbjct: 2   LPRGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.8 bits (98), Expect = 2e-06
 Identities = 9/31 (29%), Positives = 20/31 (64%)

Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGER 292
           + FEC +  C K + +  ++++H++TH  +R
Sbjct: 17  KTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.0 bits (75), Expect = 0.004
 Identities = 8/41 (19%), Positives = 19/41 (46%), Gaps = 3/41 (7%)

Query: 311 LSRHKRTHTGEKKFGCSIC--NRRFMRSDHLAKHVKRHSKD 349
           + ++ +    +K F C      + F R  ++  H++ H +D
Sbjct: 7   IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (152), Expect = 1e-13
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
                   R + C    CG+ FS S +LS+H+RTHTGE
Sbjct: 3   SEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (121), Expect = 2e-09
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query: 313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
           R +      +++ C  C + F  S  L+KH + H+
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (92), Expect = 2e-05
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGE 291
           ++C+   CGK++  SS L  H RTHTGE
Sbjct: 13  YKCD--ECGKSFSHSSDLSKHRRTHTGE 38

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.3 bits (149), Expect = 3e-13
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQW 298
           F C    CGK++    HLK HM+ H+  R ++C++
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (129), Expect = 2e-10
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 294 FLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGC 326
           F C    CG+ F+    L  H + H+  + + C
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (140), Expect = 4e-12
 Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 2/34 (5%)

Query: 288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
           H+GE+P+ C    CG+ FSRS  L +H+R HTGE
Sbjct: 2   HSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 13/30 (43%), Positives = 19/30 (63%)

Query: 318 HTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
           H+GEK +GC  C + F RS  L +H + H+
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHT 31

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (105), Expect = 3e-07
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGE 291
           + C    CGK + +SS L  H R HTGE
Sbjct: 8   YGCVE--CGKAFSRSSILVQHQRVHTGE 33

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 9e-12
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
           ++ + CQ   CG+ F+   +  RH   H G + +GC +C ++F    HL  H+K H
Sbjct: 1   DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (125), Expect = 6e-10
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTH 318
           + C    CGK++   S    HM  H G RP+ C    CG++F     L  H + H
Sbjct: 4   YPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH 53

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.8 bits (135), Expect = 2e-11
 Identities = 12/31 (38%), Positives = 20/31 (64%)

Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
           +RP+ C   GC + F R+ +L RHK++H  +
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.7 bits (114), Expect = 1e-08
 Identities = 7/30 (23%), Positives = 16/30 (53%)

Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGE 291
           R + C++  C K + ++  L  H ++H  +
Sbjct: 2   RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.4 bits (82), Expect = 4e-04
 Identities = 8/30 (26%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 321 EKKFGCSI--CNRRFMRSDHLAKHVKRHSK 348
           ++ + C    C++ F+R+  L +H K H +
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (135), Expect = 2e-11
 Identities = 24/31 (77%), Positives = 28/31 (90%)

Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
           RPF+C W+ CG+RF+RSDEL RHKRTHTGEK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (127), Expect = 3e-10
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGER 292
           F C +  CGK + +S  L+ H RTHTGE+
Sbjct: 3   FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.9 bits (135), Expect = 2e-11
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTG 320
             R  TG +PF C    C R FSRSD L+ H++ H  
Sbjct: 2   STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.7 bits (119), Expect = 3e-09
 Identities = 19/33 (57%), Positives = 20/33 (60%)

Query: 314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
             R  TG K F C  C+R F RSDHLA H KRH
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.3 bits (79), Expect = 0.001
 Identities = 8/27 (29%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTG 290
           F+C   +C +++ +S HL  H + H  
Sbjct: 12  FQCP--DCDRSFSRSDHLALHRKRHML 36

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (135), Expect = 2e-11
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 286 RTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
           RTHTGE+P+ C    C + F +   L  H + +    
Sbjct: 1   RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (113), Expect = 2e-08
 Identities = 15/32 (46%), Positives = 20/32 (62%)

Query: 316 RTHTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
           RTHTGEK + CS C++ F +   L  H KR+ 
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 5e-05
 Identities = 5/28 (17%), Positives = 12/28 (42%), Gaps = 2/28 (7%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGE 291
           + C++  C K + +   L  H + +   
Sbjct: 9   YACSH--CDKTFRQKQLLDMHFKRYHDP 34

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (129), Expect = 1e-10
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHT 319
           RP++C + GC ++F++S  L  H  TH 
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.7 bits (119), Expect = 3e-09
 Identities = 10/28 (35%), Positives = 19/28 (67%)

Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHT 289
           R + C ++ C K + +S++LK+H+ TH 
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 0.001
 Identities = 8/28 (28%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 322 KKFGCSI--CNRRFMRSDHLAKHVKRHS 347
           + + C    CN++F +S +L  H+  H+
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (129), Expect = 1e-10
 Identities = 13/30 (43%), Positives = 19/30 (63%)

Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
           +P  C + GC + +SR + L  H R+HTGE
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (129), Expect = 2e-10
 Identities = 13/28 (46%), Positives = 20/28 (71%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGE 291
            +C +E C K+Y +  +LK H+R+HTGE
Sbjct: 3   HKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (127), Expect = 3e-10
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 286 RTHTGERPFLCQWTGCGRRFSRSDELSRHK-RTHTGE 321
           RTH+GE+P+ C    C  RF++S  +  H  + HT  
Sbjct: 1   RTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (121), Expect = 2e-09
 Identities = 13/31 (41%), Positives = 20/31 (64%)

Query: 316 RTHTGEKKFGCSICNRRFMRSDHLAKHVKRH 346
           RTH+GEK + C IC+ RF +S  +  H+ + 
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 0.001
 Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 3/29 (10%)

Query: 264 FECNYENCGKNYFKSSHLKAH-MRTHTGE 291
           +EC    C   + +S  +K H ++ HT  
Sbjct: 9   YECYI--CHARFTQSGTMKMHILQKHTEN 35

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.3 bits (126), Expect = 3e-10
 Identities = 17/29 (58%), Positives = 20/29 (68%)

Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTG 320
           RP+ C    C RRFSRS +L+RH R HTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.2 bits (123), Expect = 1e-09
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTG 290
           + C  E+C + + +S+ L  H+R HTG
Sbjct: 3   YACPVESCDRRFSRSADLTRHIRIHTG 29

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (120), Expect = 2e-09
 Identities = 15/30 (50%), Positives = 19/30 (63%)

Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
           +PF C + GCG+RFS    L  H R HTG+
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (117), Expect = 6e-09
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGE 291
           F+C +E CGK +    +L+ H+R HTG+
Sbjct: 3   FQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (118), Expect = 5e-09
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)

Query: 289 TGERPFLCQWTGCGRRFSRSDELSRH-KRTHTGEKKFGCSI 328
           +  +P++CQ   CG+ FSR D L+ H K+ HT E+   C +
Sbjct: 1   SVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (113), Expect = 2e-08
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)

Query: 264 FECNYENCGKNYFKSSHLKAHMR-THTGERPFLCQ 297
           + C    CGK + +  HL  H++  HT ERP  CQ
Sbjct: 6   YICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 319 TGEKKFGCSICNRRFMRSDHLAKHVKRH 346
           +  K + C  C + F R DHL  H+K+ 
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQV 28

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.0 bits (117), Expect = 6e-09
 Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 2/34 (5%)

Query: 288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
            +G+RPF      C   F+     +RH + HT  
Sbjct: 2   SSGKRPF--VCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (96), Expect = 5e-06
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 318 HTGEKKFGCSICNRRFMRSDHLAKHVKRHS 347
            +G++ F C IC   F    + A+H+K H+
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHT 31

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.1 bits (81), Expect = 5e-04
 Identities = 4/26 (15%), Positives = 9/26 (34%)

Query: 266 CNYENCGKNYFKSSHLKAHMRTHTGE 291
                C   +   ++   H++ HT  
Sbjct: 8   FVCRICLSAFTTKANCARHLKVHTDT 33

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 48.8 bits (117), Expect = 6e-09
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
           R F+C+   C R F+R + L RH R+HT EK
Sbjct: 1   RSFVCEV--CTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 46.1 bits (110), Expect = 6e-08
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGER 292
           F C    C + + +  HLK H R+HT E+
Sbjct: 3   FVCEV--CTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 33.0 bits (76), Expect = 0.002
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query: 322 KKFGCSICNRRFMRSDHLAKHVKRHS 347
           + F C +C R F R +HL +H + H+
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHT 26

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (114), Expect = 2e-08
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEK 322
           + F C    C +RF RSD LS+H +TH  +K
Sbjct: 1   KKFACPE--CPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (105), Expect = 2e-07
 Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTGER 292
           F C    C K + +S HL  H++TH  ++
Sbjct: 3   FACPE--CPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.002
 Identities = 17/26 (65%), Positives = 20/26 (76%)

Query: 322 KKFGCSICNRRFMRSDHLAKHVKRHS 347
           KKF C  C +RFMRSDHL+KH+K H 
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQ 26

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.7 bits (109), Expect = 8e-08
 Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 2/30 (6%)

Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTG 320
           ++PF C+   C R FSRSD L+ H RTHTG
Sbjct: 1   QKPFQCRI--CMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 2/27 (7%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHTG 290
           F+C    C +N+ +S HL  H+RTHTG
Sbjct: 4   FQCRI--CMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.7 bits (83), Expect = 2e-04
 Identities = 14/27 (51%), Positives = 18/27 (66%)

Query: 321 EKKFGCSICNRRFMRSDHLAKHVKRHS 347
           +K F C IC R F RSDHL  H++ H+
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHT 27

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.8 bits (93), Expect = 1e-05
 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 2/28 (7%)

Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTH 318
           E+PF C    CGR+F+RSDE  RH + H
Sbjct: 1   EKPFACDI--CGRKFARSDERKRHTKIH 26

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.0 bits (83), Expect = 2e-04
 Identities = 14/28 (50%), Positives = 17/28 (60%)

Query: 321 EKKFGCSICNRRFMRSDHLAKHVKRHSK 348
           EK F C IC R+F RSD   +H K H +
Sbjct: 1   EKPFACDICGRKFARSDERKRHTKIHLR 28

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (91), Expect = 2e-05
 Identities = 17/35 (48%), Positives = 22/35 (62%)

Query: 291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFG 325
           ++PFLC   GCG+RF+  D L+ HK  H    KFG
Sbjct: 4   DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG 38

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (82), Expect = 4e-04
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHT 319
           +P+ C    CG+ FS++  L  H+R HT
Sbjct: 1   KPYKCLE--CGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (81), Expect = 5e-04
 Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%)

Query: 264 FECNYENCGKNYFKSSHLKAHMRTHT 289
           ++C    CGK + ++S L  H R HT
Sbjct: 3   YKCL--ECGKAFSQNSGLINHQRIHT 26

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

 Score = 35.0 bits (80), Expect = 5e-04
 Identities = 14/30 (46%), Positives = 19/30 (63%)

Query: 292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGE 321
           +PF C+  GC + F+    L+RH  THTGE
Sbjct: 1   KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

 Score = 32.7 bits (74), Expect = 0.003
 Identities = 13/30 (43%), Positives = 15/30 (50%)

Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGE 291
           + F C  E C K +    HL  H  THTGE
Sbjct: 1   KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 5e-04
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 321 EKKFGCSICNRRFMRSDHLAKHVKRHSKDGAIT 353
           EK + C +C  RF R D ++ HV+ H  DG++ 
Sbjct: 1   EKPYSCPVCGLRFKRKDRMSYHVRSH--DGSVG 31

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

 Score = 33.4 bits (76), Expect = 0.002
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 262 RIFECNYENCGKNYFKSSHLKAHMRTHTGE 291
           + + C++ +CG  Y K+  L+AH+  HTGE
Sbjct: 2   KRYICSFADCGAAYNKNWKLQAHLSKHTGE 31

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 3/31 (9%)

Query: 264 FECNYENCGKNY--FKSSH-LKAHMRTHTGE 291
           F C++  C +    FK+ + L  HMR HTGE
Sbjct: 3   FVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 33

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

 Score = 33.2 bits (75), Expect = 0.002
 Identities = 12/27 (44%), Positives = 19/27 (70%)

Query: 263 IFECNYENCGKNYFKSSHLKAHMRTHT 289
           ++ C++ENCGK + K + LK H  +HT
Sbjct: 1   MYVCHFENCGKAFKKHNQLKVHQFSHT 27

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	384
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.5
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.33
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.15
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.06
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.03
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.02
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.99
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.95
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.94
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.94
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.94
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.9
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.87
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.86
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.86
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.84
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.83
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.8
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.77
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.7
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.7
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.68
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.68
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.67
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.64
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.64
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.62
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.59
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.58
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.57
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.54
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.51
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.5
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.47
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.46
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.45
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.43
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.38
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.37
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.08
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.05
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.01
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.83
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.73
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.63
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.59
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.56
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.49
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.46
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.45
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.43
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.4
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.36
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.35
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.27
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.26
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.24
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.11
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.06
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.97
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.95
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.88
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.88
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.81
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.77
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.75
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.58
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.57
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.55
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.53
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.49
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.39
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.38
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.29
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.26
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.16
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.01
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	95.79
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.76
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.58
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.52
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.39
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	95.19
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	95.13
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.09
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	94.81
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.22
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.15
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.98
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	93.62
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	93.51
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.39
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.27
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	92.98
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	92.4
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	91.72
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	91.64
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	91.51
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	89.2
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	89.2
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	88.54
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	87.41
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	86.59
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	86.19
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	85.42
d1y0jb1	36	U-shaped transcription factor, different fingers {	82.89
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	80.4

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=5.1e-15  Score=105.26  Aligned_cols=53  Identities=32%  Similarity=0.871  Sum_probs=43.6

Q ss_pred             CCccccccCCCCCccCChHHHHHHHhhhcCCCccccCccCcccCChHHHHHHHHHh
Q psy17740        291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRH  346 (384)
Q Consensus       291 ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H  346 (384)
                      ||+|.|  . ||+.|..+..|.+|+++|+|++||.|.+||++|.+.+.|.+|+++|
T Consensus         1 EK~y~C--~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC--Q-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC--T-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC--C-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            577888  3 8888888888888888888888888888888888888888888776

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=4.7e-13  Score=94.84  Aligned_cols=53  Identities=34%  Similarity=0.838  Sum_probs=50.0

Q ss_pred             CceeecccCCCCCcccChhhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhh
Q psy17740        261 RRIFECNYENCGKNYFKSSHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTH  318 (384)
Q Consensus       261 ~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~H  318 (384)
                      +|+|.|  + ||+.|.....|..|+++|++++||.|..  ||+.|.....|.+|+++|
T Consensus         1 EK~y~C--~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~--C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC--Q-CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC--T-TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC--C-CCCeECCHHHhHHHhhccccccCCcCCC--cCCEecCHHHHHHHHhcC
Confidence            479999  4 9999999999999999999999999955  999999999999999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=3.2e-12  Score=84.31  Aligned_cols=37  Identities=24%  Similarity=0.640  Sum_probs=31.6

Q ss_pred             HHHhhhcCCCccccCccCcccCChHHHHHHHHHhcCC
Q psy17740        313 RHKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       313 ~H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      +|+++|+++|||.|.+|||+|.+.++|.+|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4788888888888888888888888888888888875

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=3.3e-11  Score=76.68  Aligned_cols=33  Identities=39%  Similarity=0.847  Sum_probs=28.6

Q ss_pred             hhcCCCccccCccCcccCChHHHHHHHHHhcCC
Q psy17740        317 THTGEKKFGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       317 ~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      +|+|+|||+|.+||++|.+.+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            488888888888888888888888888888875

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=5e-11  Score=77.51  Aligned_cols=34  Identities=44%  Similarity=0.798  Sum_probs=30.2

Q ss_pred             hhhcCCCccccCccCcccCChHHHHHHHHHhcCC
Q psy17740        316 RTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       316 r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      |+|+|||||+|.+||++|.+.+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5789999999999999999999999999998865

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=3.8e-11  Score=78.56  Aligned_cols=35  Identities=54%  Similarity=0.824  Sum_probs=29.7

Q ss_pred             HHhhhcCCCccccCccCcccCChHHHHHHHHHhcC
Q psy17740        314 HKRTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSK  348 (384)
Q Consensus       314 H~r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~  348 (384)
                      |.|.|+|||||+|.+|+++|.++++|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67888888888888888888888888888888853

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.1e-10  Score=77.02  Aligned_cols=35  Identities=31%  Similarity=0.618  Sum_probs=21.4

Q ss_pred             CCccccCccCcccCChHHHHHHHH-HhcCCCCCCCC
Q psy17740        321 EKKFGCSICNRRFMRSDHLAKHVK-RHSKDGAITPS  355 (384)
Q Consensus       321 ekpf~C~~C~k~F~~~s~L~~H~r-~H~~e~~~~c~  355 (384)
                      +|||+|.+||++|.+.++|.+|++ +|+++++|.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            456666666666666666666654 46666666654

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.4e-10  Score=75.26  Aligned_cols=34  Identities=38%  Similarity=0.831  Sum_probs=28.6

Q ss_pred             hhhcCCCccccCccCcccCChHHHHHHHHHhcCC
Q psy17740        316 RTHTGEKKFGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       316 r~Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      |+|+|||||+|++|++.|.++++|++|++.|+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            5789999999999999999999999998766554

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.94  E-value=1.5e-10  Score=74.61  Aligned_cols=32  Identities=31%  Similarity=0.685  Sum_probs=27.3

Q ss_pred             hcCCCccccCccCcccCChHHHHHHHHHhcCC
Q psy17740        318 HTGEKKFGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       318 Htgekpf~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      |+|+|||+|.+|++.|.++++|.+|+++|+.+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68888888888888888888888888888764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.6e-10  Score=74.95  Aligned_cols=33  Identities=39%  Similarity=0.921  Sum_probs=16.6

Q ss_pred             eecccCCCCCcccChhhHHHHHHhhcCCCcccc
Q psy17740        264 FECNYENCGKNYFKSSHLKAHMRTHTGERPFLC  296 (384)
Q Consensus       264 f~C~~e~Cgk~F~~~s~L~~H~r~H~~ekp~~C  296 (384)
                      |.|.+++||+.|.+..+|++|+++|+|++||.|
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeC
Confidence            444444455555555555555555555555554

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2.1e-10  Score=74.38  Aligned_cols=35  Identities=26%  Similarity=0.698  Sum_probs=33.4

Q ss_pred             cccccCCCCCccCChHHHHHHHhhhcCCCccccCc
Q psy17740        294 FLCQWTGCGRRFSRSDELSRHKRTHTGEKKFGCSI  328 (384)
Q Consensus       294 ~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf~C~~  328 (384)
                      |.|.+++|++.|.++.+|++|+++|+|+|||+|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            78999999999999999999999999999999974

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.90  E-value=6e-11  Score=81.68  Aligned_cols=37  Identities=24%  Similarity=0.616  Sum_probs=19.7

Q ss_pred             HHHHhhhcCCCccccCc--cCcccCChHHHHHHHHHhcCC
Q psy17740        312 SRHKRTHTGEKKFGCSI--CNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       312 ~~H~r~Htgekpf~C~~--C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      .+|++ |+|++||.|.+  |++.|.+.++|.+|+++|+|+
T Consensus         8 ~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           8 DKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             cchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            33443 55555555544  555555555555555555554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.87  E-value=4.3e-10  Score=68.72  Aligned_cols=28  Identities=50%  Similarity=1.020  Sum_probs=23.9

Q ss_pred             CCccccCccCcccCChHHHHHHHHHhcC
Q psy17740        321 EKKFGCSICNRRFMRSDHLAKHVKRHSK  348 (384)
Q Consensus       321 ekpf~C~~C~k~F~~~s~L~~H~r~H~~  348 (384)
                      ||||+|.+|+++|.++++|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6788888888888888888888888876

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.86  E-value=5.7e-10  Score=68.80  Aligned_cols=29  Identities=34%  Similarity=0.929  Sum_probs=21.7

Q ss_pred             CccccCccCcccCChHHHHHHHHHhcCCC
Q psy17740        322 KKFGCSICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       322 kpf~C~~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      |||.|.+|+++|.+.+.|.+|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57777777777777777777777777764

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=6.5e-10  Score=73.25  Aligned_cols=36  Identities=42%  Similarity=0.923  Sum_probs=24.0

Q ss_pred             CCCccccccCCCCCccCChHHHHHHHh-hhcCCCccccC
Q psy17740        290 GERPFLCQWTGCGRRFSRSDELSRHKR-THTGEKKFGCS  327 (384)
Q Consensus       290 ~ekp~~C~~~~Cgk~F~~~~~L~~H~r-~Htgekpf~C~  327 (384)
                      .+|||.|..  ||+.|....+|.+|++ +|+|+|||+|+
T Consensus         2 ~~Kpy~C~~--Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCC--CCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            356677733  7777777777777754 57777777765

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=2.5e-10  Score=75.04  Aligned_cols=37  Identities=43%  Similarity=0.846  Sum_probs=34.1

Q ss_pred             HHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        283 AHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       283 ~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      +|+++|++++||.|.  .||+.|...++|.+|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~--~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCD--ECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCS--SSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecC--CCCceeeCHHHHHHhCccCCCC
Confidence            588899999999995  4999999999999999999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.83  E-value=1.3e-10  Score=79.90  Aligned_cols=43  Identities=21%  Similarity=0.586  Sum_probs=39.2

Q ss_pred             hhHHHHHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcCCC
Q psy17740        279 SHLKAHMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGEK  322 (384)
Q Consensus       279 s~L~~H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htgek  322 (384)
                      ..|.+|++ |.+++||.|.|++|++.|.++++|.+|+++|+|+|
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            45677875 99999999998899999999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.3e-09  Score=67.19  Aligned_cols=29  Identities=59%  Similarity=1.111  Sum_probs=22.7

Q ss_pred             CccccCccCcccCChHHHHHHHHHhcCCC
Q psy17740        322 KKFGCSICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       322 kpf~C~~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      |||.|.+||++|.+++.|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            57788888888888888888888887764

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.9e-09  Score=67.38  Aligned_cols=31  Identities=77%  Similarity=1.521  Sum_probs=17.8

Q ss_pred             CccccccCCCCCccCChHHHHHHHhhhcCCC
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEK  322 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~Htgek  322 (384)
                      +||.|++++|++.|.+.++|.+|+++|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            3555555555555555555555555555553

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=4.5e-09  Score=65.08  Aligned_cols=28  Identities=43%  Similarity=0.983  Sum_probs=12.4

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhhcC
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTHTG  320 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~Htg  320 (384)
                      ||.|.+++|++.|.++++|++|+++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            3444444444444444444444444444

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=3.9e-09  Score=66.87  Aligned_cols=33  Identities=55%  Similarity=1.078  Sum_probs=29.4

Q ss_pred             hhcCCCccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        287 THTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       287 ~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      +|++++||.|.  .||++|..++.|.+|+++|+||
T Consensus         1 IHTgekpy~C~--~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCV--ECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECS--SSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCC--CCCCEeCchHHhHhhccccCCC
Confidence            48999999994  4999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=3.8e-09  Score=65.50  Aligned_cols=26  Identities=50%  Similarity=0.985  Sum_probs=9.9

Q ss_pred             cccccCCCCCccCChHHHHHHHhhhc
Q psy17740        294 FLCQWTGCGRRFSRSDELSRHKRTHT  319 (384)
Q Consensus       294 ~~C~~~~Cgk~F~~~~~L~~H~r~Ht  319 (384)
                      |.|.+++|++.|.+.++|++|+|+|+
T Consensus         3 ~~C~~~gCgk~F~~~~~L~~H~r~HT   28 (30)
T d1ubdc3           3 FQCTFEGCGKRFSLDFNLRTHVRIHT   28 (30)
T ss_dssp             EECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             ccCCCCCCCceECcHHHcCccccccC
Confidence            33333333333333333333333333

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.68  E-value=2.8e-09  Score=69.48  Aligned_cols=35  Identities=46%  Similarity=0.792  Sum_probs=32.1

Q ss_pred             HHHhhcCCCccccccCCCCCccCChHHHHHHHhhhcC
Q psy17740        284 HMRTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTG  320 (384)
Q Consensus       284 H~r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htg  320 (384)
                      |.|+|+|+|||.|..  |++.|.++++|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~--C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCC--CCCEecCHHHHHHHHhcCcC
Confidence            678999999999955  99999999999999999974

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=4.6e-09  Score=65.60  Aligned_cols=31  Identities=48%  Similarity=0.971  Sum_probs=29.5

Q ss_pred             ceeecccCCCCCcccChhhHHHHHHhhcCCC
Q psy17740        262 RIFECNYENCGKNYFKSSHLKAHMRTHTGER  292 (384)
Q Consensus       262 k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ek  292 (384)
                      ++|.|.+++||+.|.+.++|++|+++|+|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            5899999999999999999999999999986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=6.5e-09  Score=67.25  Aligned_cols=34  Identities=35%  Similarity=0.752  Sum_probs=30.6

Q ss_pred             HhhcCCCccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        286 RTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       286 r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      |+|+|++||.|..  ||++|..++.|.+|+++|+++
T Consensus         1 R~HTgekPy~C~~--C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCC--CCCCcCCHhHHHHhCcccCCC
Confidence            5799999999955  999999999999999999865

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=7.2e-09  Score=64.21  Aligned_cols=30  Identities=40%  Similarity=0.970  Sum_probs=28.7

Q ss_pred             ceeecccCCCCCcccChhhHHHHHHhhcCC
Q psy17740        262 RIFECNYENCGKNYFKSSHLKAHMRTHTGE  291 (384)
Q Consensus       262 k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~e  291 (384)
                      |+|.|.+++||+.|.+.++|++|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            589999999999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=6.9e-09  Score=61.88  Aligned_cols=26  Identities=27%  Similarity=0.650  Sum_probs=23.0

Q ss_pred             CccccCccCcccCChHHHHHHHHHhc
Q psy17740        322 KKFGCSICNRRFMRSDHLAKHVKRHS  347 (384)
Q Consensus       322 kpf~C~~C~k~F~~~s~L~~H~r~H~  347 (384)
                      |||+|.+|||+|.+++.|.+|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68999999999999999999999885

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=1.3e-08  Score=62.92  Aligned_cols=28  Identities=25%  Similarity=0.750  Sum_probs=26.8

Q ss_pred             CccccCc--cCcccCChHHHHHHHHHhcCC
Q psy17740        322 KKFGCSI--CNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       322 kpf~C~~--C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      |||+|.+  |+++|.+.++|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6999999  999999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.58  E-value=1.4e-08  Score=65.17  Aligned_cols=32  Identities=34%  Similarity=0.793  Sum_probs=27.1

Q ss_pred             hcCCCccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        288 HTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       288 H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      |+|+|||.|.+  |++.|.++.+|.+|+++|+.+
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHccccCCc
Confidence            68888999965  999999999999998888764

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.57  E-value=1.5e-08  Score=62.23  Aligned_cols=29  Identities=52%  Similarity=1.030  Sum_probs=19.9

Q ss_pred             CccccccCCCCCccCChHHHHHHHhhhcCCC
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEK  322 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~Htgek  322 (384)
                      +||.|.+  |++.|.++++|.+|+++|+|||
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCC--CCCCCCCchHcccccCcccCCC
Confidence            4677744  7777777777777777777764

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=1.4e-08  Score=65.61  Aligned_cols=34  Identities=38%  Similarity=0.761  Sum_probs=28.8

Q ss_pred             HhhcCCCccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        286 RTHTGERPFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       286 r~H~~ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      |+|+|++||.|.+  |++.|.++++|++|++.++++
T Consensus         1 R~HTgekP~~C~~--C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCC--CcccccchHHHHHHcccccCC
Confidence            5799999999966  999999999999997665443

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.51  E-value=1.7e-08  Score=61.87  Aligned_cols=27  Identities=56%  Similarity=1.069  Sum_probs=12.6

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhhc
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTHT  319 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~Ht  319 (384)
                      ||.|.+++|++.|.+.++|.+|+++|+
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccC
Confidence            444444444444444444444444444

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.50  E-value=3.7e-08  Score=61.78  Aligned_cols=29  Identities=41%  Similarity=1.045  Sum_probs=15.5

Q ss_pred             CCccccccCCCCCccCChHHHHHHHhhhc
Q psy17740        291 ERPFLCQWTGCGRRFSRSDELSRHKRTHT  319 (384)
Q Consensus       291 ekp~~C~~~~Cgk~F~~~~~L~~H~r~Ht  319 (384)
                      |+||.|.+++|++.|.+.++|++|+++|+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            34555555555555555555555555554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=4.2e-08  Score=60.20  Aligned_cols=29  Identities=48%  Similarity=0.903  Sum_probs=19.4

Q ss_pred             CccccccCCCCCccCChHHHHHHHhhhcCCC
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGEK  322 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~Htgek  322 (384)
                      |||.|.+  ||+.|.++++|.+|+++|+|||
T Consensus         1 Kpy~C~~--C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPE--CPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTT--TTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCc--CCCeecchHHhhhhcCccCCcC
Confidence            4667744  7777777777777777777664

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.46  E-value=3e-08  Score=60.30  Aligned_cols=28  Identities=61%  Similarity=1.121  Sum_probs=18.0

Q ss_pred             CCccccccCCCCCccCChHHHHHHHhhhcC
Q psy17740        291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTG  320 (384)
Q Consensus       291 ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htg  320 (384)
                      ||||+|..  |++.|.++++|.+|+++|+|
T Consensus         1 EKPy~C~~--C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRI--CMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCC--CcCEecccccccccCCCccC
Confidence            46666633  66666666666666666665

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=3e-08  Score=60.21  Aligned_cols=26  Identities=38%  Similarity=1.026  Sum_probs=11.8

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhh
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTH  318 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~H  318 (384)
                      ||.|.+++|||.|.+.++|++|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            44444444444444444444444444

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.43  E-value=4e-08  Score=60.21  Aligned_cols=29  Identities=38%  Similarity=0.870  Sum_probs=27.7

Q ss_pred             ceeecccCCCCCcccChhhHHHHHHhhcC
Q psy17740        262 RIFECNYENCGKNYFKSSHLKAHMRTHTG  290 (384)
Q Consensus       262 k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~  290 (384)
                      |+|.|.+++|++.|.+.++|++|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            58999999999999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=5.3e-08  Score=59.09  Aligned_cols=28  Identities=36%  Similarity=0.867  Sum_probs=26.7

Q ss_pred             ceeecccCCCCCcccChhhHHHHHHhhc
Q psy17740        262 RIFECNYENCGKNYFKSSHLKAHMRTHT  289 (384)
Q Consensus       262 k~f~C~~e~Cgk~F~~~s~L~~H~r~H~  289 (384)
                      ++|.|.+++|||.|.+.++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5899999999999999999999999995

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.37  E-value=9.7e-08  Score=59.80  Aligned_cols=31  Identities=23%  Similarity=0.629  Sum_probs=28.8

Q ss_pred             CceeecccCCCCCcccChhhHHHHHHhhcCC
Q psy17740        261 RRIFECNYENCGKNYFKSSHLKAHMRTHTGE  291 (384)
Q Consensus       261 ~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~e  291 (384)
                      +++|.|.+++|++.|.+.++|++|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            4789999999999999999999999999864

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.08  E-value=6.6e-07  Score=52.68  Aligned_cols=27  Identities=52%  Similarity=0.963  Sum_probs=22.0

Q ss_pred             CCccccCccCcccCChHHHHHHHHHhc
Q psy17740        321 EKKFGCSICNRRFMRSDHLAKHVKRHS  347 (384)
Q Consensus       321 ekpf~C~~C~k~F~~~s~L~~H~r~H~  347 (384)
                      |+||.|.+||+.|+++...++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            578888888888888888888888774

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=8.3e-07  Score=52.66  Aligned_cols=25  Identities=40%  Similarity=0.990  Sum_probs=12.6

Q ss_pred             CccccccCCCCCccCChHHHHHHHhhh
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRTH  318 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~H  318 (384)
                      |||+|  .+|||.|..++.|.+|+|+|
T Consensus         1 KPy~C--~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKC--LECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEEC--SSSCCEESSHHHHHHHHHHH
T ss_pred             CCccC--CCCcCeeccCcccccCccCC
Confidence            34555  33555555555555555554

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=9.7e-07  Score=50.40  Aligned_cols=19  Identities=58%  Similarity=1.046  Sum_probs=9.7

Q ss_pred             CCCccCChHHHHHHHhhhc
Q psy17740        301 CGRRFSRSDELSRHKRTHT  319 (384)
Q Consensus       301 Cgk~F~~~~~L~~H~r~Ht  319 (384)
                      |++.|.+++.|+.|+|.|+
T Consensus         7 c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           7 CGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             TTBCCCCHHHHHHHGGGCC
T ss_pred             hhhHhcchhHHHHHhhccC
Confidence            5555555555555555544

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=4.5e-06  Score=47.58  Aligned_cols=26  Identities=31%  Similarity=0.760  Sum_probs=17.8

Q ss_pred             ccccCccCcccCChHHHHHHHHHhcC
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVKRHSK  348 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r~H~~  348 (384)
                      |.+|+.|++.|++++.|+.|||.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            35677777777777777777776654

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=9.2e-06  Score=48.46  Aligned_cols=29  Identities=38%  Similarity=0.878  Sum_probs=22.4

Q ss_pred             CCccccCccCcccCChHHHHHHHHHhcCC
Q psy17740        321 EKKFGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       321 ekpf~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      |+||.|++|+.+|.+++.+..|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            57788888888888888888888877653

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=9.9e-06  Score=47.28  Aligned_cols=29  Identities=34%  Similarity=0.684  Sum_probs=24.3

Q ss_pred             CCccccCccCcccCChHHHHHHHHHhcCC
Q psy17740        321 EKKFGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       321 ekpf~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      ++||+|..|...-...+.|..|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57888888888888888888888888874

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.59  E-value=1.7e-05  Score=46.59  Aligned_cols=27  Identities=56%  Similarity=1.166  Sum_probs=23.0

Q ss_pred             CCccccccCCCCCccCChHHHHHHHhhhc
Q psy17740        291 ERPFLCQWTGCGRRFSRSDELSRHKRTHT  319 (384)
Q Consensus       291 ekp~~C~~~~Cgk~F~~~~~L~~H~r~Ht  319 (384)
                      ++||.|.+  ||+.|++.+..++|.+.|.
T Consensus         1 EkPf~C~~--CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDI--CGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccch--hhhhhhcchhhhhhhhhcc
Confidence            57899966  9999999999999988884

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.56  E-value=2.5e-05  Score=46.42  Aligned_cols=29  Identities=31%  Similarity=0.705  Sum_probs=20.1

Q ss_pred             ceeecccCCCCCcccChhhHHHHHHhhcC
Q psy17740        262 RIFECNYENCGKNYFKSSHLKAHMRTHTG  290 (384)
Q Consensus       262 k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~  290 (384)
                      ++|.|.+++|++.|...+.|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            46777777777777777777777776543

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=2.3e-05  Score=47.73  Aligned_cols=24  Identities=42%  Similarity=0.905  Sum_probs=13.3

Q ss_pred             CCCcccChhhHHHHHHhhcCCCcc
Q psy17740        271 CGKNYFKSSHLKAHMRTHTGERPF  294 (384)
Q Consensus       271 Cgk~F~~~s~L~~H~r~H~~ekp~  294 (384)
                      ||+.|....+|.+|..+|.+++||
T Consensus        11 cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1          11 CGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             TTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             HHHHHHHHHHHHhhhcccCCCCCC
Confidence            555555555555555555555554

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.46  E-value=3.1e-05  Score=45.26  Aligned_cols=26  Identities=42%  Similarity=1.011  Sum_probs=13.2

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhh
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTH  318 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~H  318 (384)
                      ||.|++.+|++.|...+.|++|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            45555555555555555555554444

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.45  E-value=4e-05  Score=45.00  Aligned_cols=30  Identities=43%  Similarity=0.759  Sum_probs=20.1

Q ss_pred             ceeecccCCCCCcccChhhHHHHHHhhcCC
Q psy17740        262 RIFECNYENCGKNYFKSSHLKAHMRTHTGE  291 (384)
Q Consensus       262 k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~e  291 (384)
                      ++|.|..++|.|.|....+|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            356666667777777777777776666654

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.43  E-value=4.6e-05  Score=44.50  Aligned_cols=28  Identities=36%  Similarity=0.651  Sum_probs=26.0

Q ss_pred             ceeecccCCCCCcccChhhHHHHHHhhc
Q psy17740        262 RIFECNYENCGKNYFKSSHLKAHMRTHT  289 (384)
Q Consensus       262 k~f~C~~e~Cgk~F~~~s~L~~H~r~H~  289 (384)
                      .+|.|.+++|++.|...+.|++|.+.|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            4799999999999999999999999883

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=3.4e-05  Score=47.01  Aligned_cols=30  Identities=40%  Similarity=0.834  Sum_probs=20.7

Q ss_pred             ccccccCCCCCccCChHHHHHHHhhhcCCCcc
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKRTHTGEKKF  324 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r~Htgekpf  324 (384)
                      ...|..  ||+.|....+|.+|...|.||+||
T Consensus         5 ~~~ce~--cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEI--CGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETT--TTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHH--HHHHHHHHHHHHhhhcccCCCCCC
Confidence            345644  777777777777777777777776

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=7.3e-05  Score=43.71  Aligned_cols=26  Identities=27%  Similarity=0.589  Sum_probs=19.2

Q ss_pred             cccCccCcccCChHHHHHHHHHhcCC
Q psy17740        324 FGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       324 f~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      |.|++||......+.|+.|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            66777777777777777777777765

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=5.7e-05  Score=44.86  Aligned_cols=28  Identities=29%  Similarity=0.893  Sum_probs=16.9

Q ss_pred             CccccccCCCCCccCChHHHHHHHhhhc
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRTHT  319 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~Ht  319 (384)
                      +||.|.+.+|++++...+.|+.|++.++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            4566666666666666666666666544

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.27  E-value=6.7e-05  Score=44.02  Aligned_cols=30  Identities=47%  Similarity=0.943  Sum_probs=25.9

Q ss_pred             CccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      +||.|.+.+|.|+|....+|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            578888888999999999999998888875

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=5.1e-05  Score=43.97  Aligned_cols=22  Identities=45%  Similarity=0.901  Sum_probs=11.7

Q ss_pred             CCCCCccCChHHHHHHHhhhcC
Q psy17740        299 TGCGRRFSRSDELSRHKRTHTG  320 (384)
Q Consensus       299 ~~Cgk~F~~~~~L~~H~r~Htg  320 (384)
                      .+|||+|...+.|++|+..|+|
T Consensus         6 ~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           6 AECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             TTTCCEESSHHHHHHHGGGTSC
T ss_pred             HHHhHHHHHHHHHHHHhhcccC
Confidence            3355555555555555555554

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=7.2e-05  Score=44.50  Aligned_cols=28  Identities=50%  Similarity=1.064  Sum_probs=16.7

Q ss_pred             CCccccccCCCCCccCChHHHHHHHhhhcC
Q psy17740        291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTG  320 (384)
Q Consensus       291 ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htg  320 (384)
                      ++||.|++  |+..|.+++.+..|.|.|.|
T Consensus         1 ekp~~cpi--c~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccch--HHHHhhccccceEeeecccC
Confidence            35666644  66666666666666666654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.11  E-value=0.0002  Score=40.86  Aligned_cols=25  Identities=24%  Similarity=0.713  Sum_probs=13.8

Q ss_pred             ccCccCcccCChHHHHHHHHHhcCC
Q psy17740        325 GCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       325 ~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      +|+.|.+.|.++..|+.|-+.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            3555555555555555555555554

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00016  Score=44.60  Aligned_cols=28  Identities=50%  Similarity=1.042  Sum_probs=15.1

Q ss_pred             cccccCCCC---CccCChHHHHHHHhhhcCC
Q psy17740        294 FLCQWTGCG---RRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       294 ~~C~~~~Cg---k~F~~~~~L~~H~r~Htge  321 (384)
                      |.|.|.+|.   +.|...+.|..|+|.|+||
T Consensus         3 y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           3 FVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             eEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            555555553   2355555555555555553

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00024  Score=41.05  Aligned_cols=25  Identities=28%  Similarity=0.650  Sum_probs=15.9

Q ss_pred             ccCccCcccCChHHHHHHHHHhcCC
Q psy17740        325 GCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       325 ~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      .|.+|||+|...+.|++|+..|+|+
T Consensus         4 vc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccCC
Confidence            5666666666666666666666653

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.0002  Score=45.85  Aligned_cols=26  Identities=46%  Similarity=0.970  Sum_probs=23.6

Q ss_pred             cCCCccccCccCcccCChHHHHHHHH
Q psy17740        319 TGEKKFGCSICNRRFMRSDHLAKHVK  344 (384)
Q Consensus       319 tgekpf~C~~C~k~F~~~s~L~~H~r  344 (384)
                      +|-|||.|..|+|.|.+++.+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            47799999999999999999999964

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00022  Score=43.98  Aligned_cols=30  Identities=37%  Similarity=0.772  Sum_probs=26.4

Q ss_pred             ceeecccCCCCC---cccChhhHHHHHHhhcCC
Q psy17740        262 RIFECNYENCGK---NYFKSSHLKAHMRTHTGE  291 (384)
Q Consensus       262 k~f~C~~e~Cgk---~F~~~s~L~~H~r~H~~e  291 (384)
                      +.|.|.|.+|.+   .|.....|..|||.|+||
T Consensus         1 k~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           1 KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             SCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            358999999965   499999999999999986

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00017  Score=43.22  Aligned_cols=26  Identities=38%  Similarity=1.082  Sum_probs=11.9

Q ss_pred             ccccccCCCCCccCChHHHHHHH-hhh
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHK-RTH  318 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~-r~H  318 (384)
                      ||.|.+++|.|.|...+.-..|+ |+|
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTH   28 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTH   28 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             CccccCCChhhhhcchhhhhhhccccc
Confidence            44444444444444444444443 444

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.00035  Score=40.27  Aligned_cols=26  Identities=35%  Similarity=0.658  Sum_probs=21.9

Q ss_pred             CccccCccCcccCChHHHHHHHHHhc
Q psy17740        322 KKFGCSICNRRFMRSDHLAKHVKRHS  347 (384)
Q Consensus       322 kpf~C~~C~k~F~~~s~L~~H~r~H~  347 (384)
                      +||+|..|...-...+.|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68888888888888888888888885

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.00055  Score=40.13  Aligned_cols=26  Identities=31%  Similarity=0.623  Sum_probs=20.6

Q ss_pred             CccccCccCcccCChHHHHHHHHHhc
Q psy17740        322 KKFGCSICNRRFMRSDHLAKHVKRHS  347 (384)
Q Consensus       322 kpf~C~~C~k~F~~~s~L~~H~r~H~  347 (384)
                      +||+|.+|....+..++|+.|+++-|
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            57888888888888888888887644

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.75  E-value=0.00033  Score=39.34  Aligned_cols=23  Identities=30%  Similarity=0.918  Sum_probs=15.9

Q ss_pred             cccCccCcccCChHHHHHHHHHh
Q psy17740        324 FGCSICNRRFMRSDHLAKHVKRH  346 (384)
Q Consensus       324 f~C~~C~k~F~~~s~L~~H~r~H  346 (384)
                      |+|..|.++|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            56677777777777777776666

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.00088  Score=39.02  Aligned_cols=21  Identities=52%  Similarity=0.706  Sum_probs=10.7

Q ss_pred             CCCcccChhhHHHHHHhhcCC
Q psy17740        271 CGKNYFKSSHLKAHMRTHTGE  291 (384)
Q Consensus       271 Cgk~F~~~s~L~~H~r~H~~e  291 (384)
                      ||......+-|+.|+|+|+++
T Consensus         7 Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           7 CGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             TCCBCSSHHHHHHHHHHTSSC
T ss_pred             cCcccCCHHHHHHHHHHhcCC
Confidence            555555555555555555444

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.57  E-value=0.00084  Score=38.21  Aligned_cols=26  Identities=42%  Similarity=0.745  Sum_probs=18.3

Q ss_pred             ccccCCCCCccCChHHHHHHHhhhcCCC
Q psy17740        295 LCQWTGCGRRFSRSDELSRHKRTHTGEK  322 (384)
Q Consensus       295 ~C~~~~Cgk~F~~~~~L~~H~r~Htgek  322 (384)
                      +|  +.|.+.|.+++-|+-|.|.|+||+
T Consensus         2 qc--p~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 EC--PTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CC--TTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cC--cchHHHHHHhHhhhhccccccCCC
Confidence            46  347777777777777777777764

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.00054  Score=40.94  Aligned_cols=30  Identities=33%  Similarity=0.664  Sum_probs=26.7

Q ss_pred             ceeecccCCCCCcccChhhHHHHH-HhhcCC
Q psy17740        262 RIFECNYENCGKNYFKSSHLKAHM-RTHTGE  291 (384)
Q Consensus       262 k~f~C~~e~Cgk~F~~~s~L~~H~-r~H~~e  291 (384)
                      ++|.|.+++|.|.|...++-..|+ |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            589999999999999999999997 788653

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.0007  Score=42.65  Aligned_cols=29  Identities=48%  Similarity=1.101  Sum_probs=19.9

Q ss_pred             CCccccccCCCCCccCChHHHHHHHhhhc
Q psy17740        291 ERPFLCQWTGCGRRFSRSDELSRHKRTHT  319 (384)
Q Consensus       291 ekp~~C~~~~Cgk~F~~~~~L~~H~r~Ht  319 (384)
                      +|||.|..++|+..|.+.++|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            56777766677777777777777766653

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.00077  Score=39.11  Aligned_cols=28  Identities=50%  Similarity=0.846  Sum_probs=17.2

Q ss_pred             CCccccccCCCCCccCChHHHHHHHhhhcC
Q psy17740        291 ERPFLCQWTGCGRRFSRSDELSRHKRTHTG  320 (384)
Q Consensus       291 ekp~~C~~~~Cgk~F~~~~~L~~H~r~Htg  320 (384)
                      ++||+|.+  |...-...+.|.-|+|.|+|
T Consensus         1 erpfkcql--csy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQI--CPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeee--cccccCCchheEEeeecccC
Confidence            35666644  66666666666666666665

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.39  E-value=0.00093  Score=42.25  Aligned_cols=29  Identities=31%  Similarity=0.772  Sum_probs=20.7

Q ss_pred             CccccCccCcccCChHHHHHHHHHhcCCC
Q psy17740        322 KKFGCSICNRRFMRSDHLAKHVKRHSKDG  350 (384)
Q Consensus       322 kpf~C~~C~k~F~~~s~L~~H~r~H~~e~  350 (384)
                      +.|.|.+|++.|.+...|--||+.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            45777777777777777777777776543

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.38  E-value=0.00066  Score=40.56  Aligned_cols=23  Identities=39%  Similarity=0.969  Sum_probs=18.0

Q ss_pred             ccccCccCcccCChHHHHHHHHH
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVKR  345 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r~  345 (384)
                      ||.|.+|++.|++++.|-+|...
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            67888888888888888888654

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.0012  Score=38.52  Aligned_cols=28  Identities=29%  Similarity=0.639  Sum_probs=23.7

Q ss_pred             CccccCccCcccCChHHHHHHHHHhcCC
Q psy17740        322 KKFGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       322 kpf~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      +||+|.+|...-.+.++|..|++.-|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            5899999998888999999998876654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.26  E-value=0.0016  Score=37.91  Aligned_cols=29  Identities=34%  Similarity=0.710  Sum_probs=22.1

Q ss_pred             CCccccCccCcccCChHHHHHHHHHhcCC
Q psy17740        321 EKKFGCSICNRRFMRSDHLAKHVKRHSKD  349 (384)
Q Consensus       321 ekpf~C~~C~k~F~~~s~L~~H~r~H~~e  349 (384)
                      +.-|.|..|...|.++-.|+.||-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            44577888888888888888888888764

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.16  E-value=0.0019  Score=40.56  Aligned_cols=29  Identities=28%  Similarity=0.677  Sum_probs=27.4

Q ss_pred             CceeecccCCCCCcccChhhHHHHHHhhc
Q psy17740        261 RRIFECNYENCGKNYFKSSHLKAHMRTHT  289 (384)
Q Consensus       261 ~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~  289 (384)
                      +|+|.|..++|+..|....+|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            68999999999999999999999999886

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.01  E-value=0.0027  Score=36.94  Aligned_cols=29  Identities=34%  Similarity=0.836  Sum_probs=21.9

Q ss_pred             CceeecccCCCCCcccChhhHHHHHHhhcCC
Q psy17740        261 RRIFECNYENCGKNYFKSSHLKAHMRTHTGE  291 (384)
Q Consensus       261 ~k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~e  291 (384)
                      +..|.|..  |...|++.-.|+.||-+|+|+
T Consensus         2 eqvftcs~--cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSV--CQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSS--SCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHH--HHHHHHHHHhheeeeecccCC
Confidence            35677865  888888888888888888764

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.79  E-value=0.0024  Score=37.19  Aligned_cols=23  Identities=35%  Similarity=0.761  Sum_probs=20.9

Q ss_pred             ccccCccCcccCChHHHHHHHHH
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVKR  345 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r~  345 (384)
                      ||.|..|...|.++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68899999999999999999985

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.76  E-value=0.0021  Score=38.33  Aligned_cols=26  Identities=46%  Similarity=1.022  Sum_probs=19.8

Q ss_pred             ccccccCCCCCccCChHHHHHHH-hhhcC
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHK-RTHTG  320 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~-r~Htg  320 (384)
                      ||.|.+  |++.|.+.+.|.+|. +.|.|
T Consensus         1 Pf~C~~--C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGL--CNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHTTTSCC
T ss_pred             Cccccc--ccchhhHHHHHHHHHHHHhcC
Confidence            678855  888888888888884 45654

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.58  E-value=0.0029  Score=37.46  Aligned_cols=28  Identities=39%  Similarity=0.891  Sum_probs=15.1

Q ss_pred             eeecccCCCCCcccChhhHHHHHHhhcC
Q psy17740        263 IFECNYENCGKNYFKSSHLKAHMRTHTG  290 (384)
Q Consensus       263 ~f~C~~e~Cgk~F~~~s~L~~H~r~H~~  290 (384)
                      .|.|.++.|+..|.....|..|+..|+|
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            4555555555555555555555555554

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.52  E-value=0.0042  Score=36.75  Aligned_cols=30  Identities=30%  Similarity=0.825  Sum_probs=28.2

Q ss_pred             CccccccCCCCCccCChHHHHHHHhhhcCC
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRTHTGE  321 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~Htge  321 (384)
                      +.|.|.+++|+..|...+.|..|+-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            569999999999999999999999999986

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.39  E-value=0.005  Score=35.08  Aligned_cols=26  Identities=46%  Similarity=0.966  Sum_probs=20.0

Q ss_pred             eecccCCCCCcccChhhHHHHHHhhc
Q psy17740        264 FECNYENCGKNYFKSSHLKAHMRTHT  289 (384)
Q Consensus       264 f~C~~e~Cgk~F~~~s~L~~H~r~H~  289 (384)
                      |.|.+++|++.|+....|+-|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            66777788888888888888877765

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.19  E-value=0.0075  Score=37.96  Aligned_cols=29  Identities=28%  Similarity=0.783  Sum_probs=18.5

Q ss_pred             ceeecccCCCCCcccChhhHHHHHHhhcCCC
Q psy17740        262 RIFECNYENCGKNYFKSSHLKAHMRTHTGER  292 (384)
Q Consensus       262 k~f~C~~e~Cgk~F~~~s~L~~H~r~H~~ek  292 (384)
                      +.|.|.+  |++.|.+-..|--||+.|..++
T Consensus         4 r~~~C~~--C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSF--CKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTT--TCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCC--CCCccCCcccccchHhhhcchH
Confidence            4566754  7777777777777776665443

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=95.13  E-value=0.0084  Score=33.46  Aligned_cols=24  Identities=42%  Similarity=0.891  Sum_probs=16.0

Q ss_pred             cccccCCCCCccCChHHHHHHHhhhc
Q psy17740        294 FLCQWTGCGRRFSRSDELSRHKRTHT  319 (384)
Q Consensus       294 ~~C~~~~Cgk~F~~~~~L~~H~r~Ht  319 (384)
                      |+|..  |.+.|..++.|.+|+|.|.
T Consensus         1 ykcgl--cersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGL--CERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGTC
T ss_pred             Ccccc--hHHHHHHHHHHHHHHHhhc
Confidence            46644  7777777777777777663

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.09  E-value=0.0082  Score=34.28  Aligned_cols=23  Identities=30%  Similarity=0.806  Sum_probs=18.3

Q ss_pred             ccccCccCcccCChHHHHHHHHH
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVKR  345 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r~  345 (384)
                      ||+|..||+.|.++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            67888888888888888888654

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.81  E-value=0.013  Score=34.19  Aligned_cols=24  Identities=33%  Similarity=0.714  Sum_probs=16.4

Q ss_pred             CccccccCCCCCccCChHHHHHHHhh
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRT  317 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~  317 (384)
                      +||.|.+  |....+..++|+.|+++
T Consensus         1 kpy~cqy--c~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQY--CEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHH
T ss_pred             CCccccc--cccccccchhhhhhhhc
Confidence            4677755  77777777777777664

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.22  E-value=0.015  Score=33.22  Aligned_cols=26  Identities=31%  Similarity=0.724  Sum_probs=16.5

Q ss_pred             CccccccCCCCCccCChHHHHHHHhhhc
Q psy17740        292 RPFLCQWTGCGRRFSRSDELSRHKRTHT  319 (384)
Q Consensus       292 kp~~C~~~~Cgk~F~~~~~L~~H~r~Ht  319 (384)
                      +||+|.+  |...-...+.|+.|+|.|.
T Consensus         2 kp~kck~--cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKT--CDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSS--SCCEESSHHHHHHHHHHSC
T ss_pred             CCccccc--ccchhcchhhHhhhhhccc
Confidence            4666644  6666666666666666663

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.15  E-value=0.013  Score=33.37  Aligned_cols=26  Identities=31%  Similarity=0.943  Sum_probs=18.5

Q ss_pred             cccccCCCCCccCChHHHHHHHhhhc
Q psy17740        294 FLCQWTGCGRRFSRSDELSRHKRTHT  319 (384)
Q Consensus       294 ~~C~~~~Cgk~F~~~~~L~~H~r~Ht  319 (384)
                      |.|.+.+|++.|..-..|+-|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            56777777777777777777766664

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.98  E-value=0.017  Score=32.13  Aligned_cols=22  Identities=32%  Similarity=0.816  Sum_probs=16.6

Q ss_pred             ccccCccCcccCChHHHHHHHH
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVK  344 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r  344 (384)
                      ||+|..|...|..+..|..||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6777777777777777777764

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.62  E-value=0.022  Score=33.02  Aligned_cols=22  Identities=27%  Similarity=0.884  Sum_probs=10.8

Q ss_pred             ccccccCCCCCccCChHHHHHHHh
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKR  316 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r  316 (384)
                      ||.|.+  |...|..+.+|..||+
T Consensus         1 py~C~~--CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTY--CNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHH
T ss_pred             Ccccce--eeeeEeeccchhHhhh
Confidence            344533  5555555555555544

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.51  E-value=0.021  Score=36.24  Aligned_cols=26  Identities=38%  Similarity=0.873  Sum_probs=22.5

Q ss_pred             cCCCccccccCCCCCccCChHHHHHHHh
Q psy17740        289 TGERPFLCQWTGCGRRFSRSDELSRHKR  316 (384)
Q Consensus       289 ~~ekp~~C~~~~Cgk~F~~~~~L~~H~r  316 (384)
                      +|.|||.|.+  |+|.|-..+.+.+|..
T Consensus         1 TGiKPYeC~~--C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNI--CAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSS--SCCEESCHHHHHHHHH
T ss_pred             CCCCceeccc--hhhhhhhHHHHHHhhh
Confidence            4789999955  9999999999999964

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.39  E-value=0.022  Score=32.62  Aligned_cols=25  Identities=24%  Similarity=0.324  Sum_probs=15.6

Q ss_pred             ccccCccCcccCChHHHHHHHHHhc
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVKRHS  347 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r~H~  347 (384)
                      |-+|+.|..+...+..|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            3456666666666666666666663

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.27  E-value=0.025  Score=32.46  Aligned_cols=24  Identities=29%  Similarity=0.682  Sum_probs=19.0

Q ss_pred             ecccCCCCCcccChhhHHHHHHhh
Q psy17740        265 ECNYENCGKNYFKSSHLKAHMRTH  288 (384)
Q Consensus       265 ~C~~e~Cgk~F~~~s~L~~H~r~H  288 (384)
                      .|.+.+|+|.|+..+.++.|+.+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            477778888888888888888776

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.98  E-value=0.032  Score=36.64  Aligned_cols=25  Identities=24%  Similarity=0.695  Sum_probs=23.0

Q ss_pred             ccccCccCcccCChHHHHHHHHHhc
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVKRHS  347 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r~H~  347 (384)
                      -|.|..|+|.|.....|++|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4889999999999999999999885

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.40  E-value=0.045  Score=31.21  Aligned_cols=23  Identities=30%  Similarity=0.754  Sum_probs=16.9

Q ss_pred             ccccCccCcccCChHHHHHHHHH
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVKR  345 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r~  345 (384)
                      .|+|+.|+-...+++.|+.|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            36777777777777777777764

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.72  E-value=0.056  Score=30.97  Aligned_cols=24  Identities=29%  Similarity=0.744  Sum_probs=19.8

Q ss_pred             ccccCCCCCccCChHHHHHHHhhh
Q psy17740        295 LCQWTGCGRRFSRSDELSRHKRTH  318 (384)
Q Consensus       295 ~C~~~~Cgk~F~~~~~L~~H~r~H  318 (384)
                      .|++.+|+|.|...+.++.|+.+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            577788888888888888888776

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.64  E-value=0.064  Score=29.86  Aligned_cols=22  Identities=36%  Similarity=0.881  Sum_probs=13.7

Q ss_pred             cccCccCcccCChHHHHHHHHH
Q psy17740        324 FGCSICNRRFMRSDHLAKHVKR  345 (384)
Q Consensus       324 f~C~~C~k~F~~~s~L~~H~r~  345 (384)
                      |.|++|-+.|.+++++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            4566666666666666666554

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.51  E-value=0.055  Score=32.80  Aligned_cols=26  Identities=31%  Similarity=0.713  Sum_probs=20.5

Q ss_pred             ccccCccCcccCChHHHHHHHHHhcC
Q psy17740        323 KFGCSICNRRFMRSDHLAKHVKRHSK  348 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~r~H~~  348 (384)
                      .|.|..|||.|.++..+.+|-....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48888899999988888888765544

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.20  E-value=0.11  Score=30.02  Aligned_cols=22  Identities=32%  Similarity=0.827  Sum_probs=11.5

Q ss_pred             ccccccCCCCCccCChHHHHHHHh
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKR  316 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r  316 (384)
                      ||+|.+  |..--.+.++|..|++
T Consensus         2 PFkC~~--CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           2 PFKCNY--CSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             SEECSS--SSCEESSHHHHHHHHH
T ss_pred             Ccccce--ecccccCcchHHHHHH
Confidence            455544  5555555555555544

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.20  E-value=0.14  Score=29.52  Aligned_cols=23  Identities=22%  Similarity=0.674  Sum_probs=15.4

Q ss_pred             ecccCCCCCcccChhhHHHHHHh
Q psy17740        265 ECNYENCGKNYFKSSHLKAHMRT  287 (384)
Q Consensus       265 ~C~~e~Cgk~F~~~s~L~~H~r~  287 (384)
                      .|.+++||+.|.....|.-|.+.
T Consensus         2 ~cdf~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCchhhhccHHHHHhHHHH
Confidence            36666777777777777666653

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.54  E-value=0.15  Score=29.30  Aligned_cols=23  Identities=43%  Similarity=0.924  Sum_probs=18.2

Q ss_pred             ccccCCCCCccCChHHHHHHHhh
Q psy17740        295 LCQWTGCGRRFSRSDELSRHKRT  317 (384)
Q Consensus       295 ~C~~~~Cgk~F~~~~~L~~H~r~  317 (384)
                      .|.+++||+.|....-|.-|.+.
T Consensus         2 ~cdf~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCchhhhccHHHHHhHHHH
Confidence            47788888888888888877653

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.41  E-value=0.17  Score=28.09  Aligned_cols=22  Identities=27%  Similarity=0.850  Sum_probs=16.3

Q ss_pred             cccccCCCCCccCChHHHHHHHhh
Q psy17740        294 FLCQWTGCGRRFSRSDELSRHKRT  317 (384)
Q Consensus       294 ~~C~~~~Cgk~F~~~~~L~~H~r~  317 (384)
                      |.|++  |-+.|.+++++..|.+.
T Consensus         2 ypcp~--cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPF--CFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTT--TCCEESCHHHHHHHHHH
T ss_pred             cCCch--hhHHhccccCceEEEEE
Confidence            56765  88888888888877653

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.59  E-value=0.24  Score=27.99  Aligned_cols=22  Identities=36%  Similarity=0.916  Sum_probs=17.0

Q ss_pred             ccccccCCCCCccCChHHHHHHHh
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKR  316 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r  316 (384)
                      ||+|  ..||+.+.++.+|..|..
T Consensus         1 pf~c--~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFEC--PKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBC--TTTCCBCSSHHHHHHHHH
T ss_pred             CCcc--ccchhhhhhHhHHHHHHH
Confidence            5788  458888888888888854

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.19  E-value=0.29  Score=27.86  Aligned_cols=24  Identities=29%  Similarity=0.491  Sum_probs=16.4

Q ss_pred             cccccCCCCCccCChHHHHHHHhhhc
Q psy17740        294 FLCQWTGCGRRFSRSDELSRHKRTHT  319 (384)
Q Consensus       294 ~~C~~~~Cgk~F~~~~~L~~H~r~Ht  319 (384)
                      -+|  +.|..+..++..|+.|.|.|.
T Consensus         3 ekc--~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           3 EKC--SECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             EEC--SSSSCEESSHHHHHHHHGGGC
T ss_pred             ccC--cccccccCcHHHHHHhhcccc
Confidence            456  557777777777777777664

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.42  E-value=0.24  Score=27.35  Aligned_cols=22  Identities=27%  Similarity=0.841  Sum_probs=16.0

Q ss_pred             ccccccCCCCCccCChHHHHHHHh
Q psy17740        293 PFLCQWTGCGRRFSRSDELSRHKR  316 (384)
Q Consensus       293 p~~C~~~~Cgk~F~~~~~L~~H~r  316 (384)
                      ||+|  ..|...|-.+..|..|+-
T Consensus         2 pykc--sscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKC--SSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEEC--SSSCCEESSHHHHHHHHH
T ss_pred             CCcc--cHHHHHHHHHHHHHHHHH
Confidence            6777  558888888877777753

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=82.89  E-value=0.6  Score=27.81  Aligned_cols=21  Identities=29%  Similarity=0.572  Sum_probs=14.4

Q ss_pred             ccccCccCcccCChHHHHHHH
Q psy17740        323 KFGCSICNRRFMRSDHLAKHV  343 (384)
Q Consensus       323 pf~C~~C~k~F~~~s~L~~H~  343 (384)
                      .|.|.-||-+|...+.|..|+
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            466777777777777776663

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=80.40  E-value=0.94  Score=25.96  Aligned_cols=25  Identities=20%  Similarity=0.634  Sum_probs=15.2

Q ss_pred             eeecccCCCCCcccChhhHHHHHHh
Q psy17740        263 IFECNYENCGKNYFKSSHLKAHMRT  287 (384)
Q Consensus       263 ~f~C~~e~Cgk~F~~~s~L~~H~r~  287 (384)
                      .|.|...+|.-.|..+.+++.|...
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnr   26 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNR   26 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHH
T ss_pred             CccccCCCcceEEeehHHHHHHHhh
Confidence            4566656666666666666666543