Psyllid ID: psy17779

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-
Protein Sequence
MCGLPLGGSLDPYWSNLALEYFKSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYTSVIL
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEccccccccccHHcHHHHHHHHHHHHHccccccEEccccccEEccHHHHHHHHHHccccccEEccccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHccHccccEcccccccccccccccc
Coil and Loop (DISEMBL)
mcglplggsldpywSNLALEYFKSHEQSMkaknqrpkkfncphcnvafsnngqlkghirihtgerpykcdaencgksftrneeltrhkrihsglrpypcthcgkkfgrkdhLKKHlrthfpqpryvscypymyggytsvil
Flexible Loop (DISEMBL)
mcglplggsldpYWSNLALEYFKSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTgerpykcdaencgksftrneeltrhkrihsglrpypcthcGKKFGRKDHLKKHlrthfpqpryvscypyMYGGYTSVIL
Low Complexity Region (SEG)
MCGLPLGGSLDPYWSNLALEYFKSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYTSVIL
Disordered region (IsUnstruct)
*******GSLDPYWSNLALEYF****************FNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYTSVI*
Disordered Region (DISOPRED)
*CGLPLGGSLDPYWSNLALEYFKSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYTSVIL
Disordered Region (DISEMBL)
MCGLPLGGSLDPYWSNLALEYFKSH***********KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYTSVIL
Disordered Region (DISPRO)
*CGLPLGGSLDPYWSNLALEYFKSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYG*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCGLPLGGSLDPYWSNLALEYFKSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYTSVIL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	141	2.2.26 [Sep-21-2011]
O89090	784	Transcription factor Sp1	no	N/A	0.425	0.076	0.486	4e-20
Q5E9U0	613	Transcription factor Sp2	no	N/A	0.645	0.148	0.451	8e-20
Q9D2H6	612	Transcription factor Sp2	no	N/A	0.645	0.148	0.451	1e-19
Q02086	613	Transcription factor Sp2	no	N/A	0.645	0.148	0.451	1e-19
Q9UDV7	671	Zinc finger protein 282 O	no	N/A	0.659	0.138	0.453	2e-19
A0MS83	808	Zinc finger protein 148 O	no	N/A	0.758	0.132	0.394	4e-19
Q96BV0	537	Zinc finger protein 775 O	yes	N/A	0.645	0.169	0.494	4e-19
P18714	675	Gastrula zinc finger prot	N/A	N/A	0.602	0.125	0.511	4e-19
Q8BI73	538	Zinc finger protein 775 O	no	N/A	0.808	0.211	0.408	7e-19
Q9EPW2	415	Krueppel-like factor 15 O	no	N/A	0.574	0.195	0.487	1e-18

>sp|O89090|SP1_MOUSE Transcription factor Sp1 OS=Mus musculus GN=Sp1 PE=1 SV=2

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/76 (48%), Positives = 50/76 (65%)

Query: 44  CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCG 103
           C   +     L+ H+R HTGERP+ C+   CGK FTR++EL RHKR H+G + + C  C 
Sbjct: 634 CGKVYGKTSHLRAHLRWHTGERPFMCNWSYCGKRFTRSDELQRHKRTHTGEKKFACPECP 693

Query: 104 KKFGRKDHLKKHLRTH 119
           K+F R DHL KH++TH
Sbjct: 694 KRFMRSDHLSKHIKTH 709

Transcription factor that can activate or repress transcription in response to physiological and pathological stimuli. Binds with high affinity to GC-rich motifs and regulates the expression of a large number of genes involved in a variety of processes such as cell growth, apoptosis, differentiation and immune responses. Highly regulated by post-translational modifications (phosphorylations, sumoylation, proteolytic cleavage, glycosylation and acetylation). Binds also the PDGFR-alpha G-box promoter. May have a role in modulating the cellular response to DNA damage. Implicated in chromatin remodeling. Plays a role in the recruitment of SMARCA4/BRG1 on the c-FOS promoter Plays an essential role in the regulation of FE65 gene expression.
Mus musculus (taxid: 10090)

>sp|Q5E9U0|SP2_BOVIN Transcription factor Sp2 OS=Bos taurus GN=SP2 PE=2 SV=1

 Score = 95.5 bits (236), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 2/93 (2%)

Query: 30  KAKNQRPKKFNC--PHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRH 87
           ++  Q  KK  C  P C   F     L+ H+R+HTGERP+ C+   CGK FTR++EL RH
Sbjct: 516 RSGEQGKKKHVCHIPDCGKTFRKTSLLRAHVRLHTGERPFVCNWFFCGKRFTRSDELQRH 575

Query: 88  KRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHF 120
            R H+G + + C  C K+F R DHL KH +TH 
Sbjct: 576 ARTHTGDKRFECAQCQKRFMRSDHLTKHYKTHL 608

Binds to GC box promoters elements and selectively activates mRNA synthesis from genes that contain functional recognition sites.

Bos taurus (taxid: 9913)

>sp|Q9D2H6|SP2_MOUSE Transcription factor Sp2 OS=Mus musculus GN=Sp2 PE=2 SV=2

 Score = 95.1 bits (235), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 2/93 (2%)

Query: 30  KAKNQRPKKFNC--PHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRH 87
           ++  Q  KK  C  P C   F     L+ H+R+HTGERP+ C+   CGK FTR++EL RH
Sbjct: 515 RSGEQGKKKHVCHIPDCGKTFRKTSLLRAHVRLHTGERPFVCNWFFCGKRFTRSDELQRH 574

Query: 88  KRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHF 120
            R H+G + + C  C K+F R DHL KH +TH 
Sbjct: 575 ARTHTGDKRFECAQCQKRFMRSDHLTKHYKTHL 607

Binds to GC box promoters elements and selectively activates mRNA synthesis from genes that contain functional recognition sites.

Mus musculus (taxid: 10090)

>sp|Q02086|SP2_HUMAN Transcription factor Sp2 OS=Homo sapiens GN=SP2 PE=1 SV=3

 Score = 94.7 bits (234), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 2/93 (2%)

Query: 30  KAKNQRPKKFNC--PHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRH 87
           ++  Q  KK  C  P C   F     L+ H+R+HTGERP+ C+   CGK FTR++EL RH
Sbjct: 516 RSGEQGKKKHVCHIPDCGKTFRKTSLLRAHVRLHTGERPFVCNWFFCGKRFTRSDELQRH 575

Query: 88  KRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHF 120
            R H+G + + C  C K+F R DHL KH +TH 
Sbjct: 576 ARTHTGDKRFECAQCQKRFMRSDHLTKHYKTHL 608

Binds to GC box promoters elements and selectively activates mRNA synthesis from genes that contain functional recognition sites.

Homo sapiens (taxid: 9606)

>sp|Q9UDV7|ZN282_HUMAN Zinc finger protein 282 OS=Homo sapiens GN=ZNF282 PE=2 SV=3

 Score = 94.4 bits (233), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/97 (45%), Positives = 57/97 (58%), Gaps = 4/97 (4%)

Query: 27  QSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTR 86
             M  + +RP  + C  C   +S    L+ H R+HTGERP++C    CGKSF R + L +
Sbjct: 564 HQMTHRGERP--YKCSECEKTYSRKEHLQNHQRLHTGERPFQCAL--CGKSFIRKQNLLK 619

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQP 123
           H+RIH+G RPY C  CGK F  K+ LK HLR H   P
Sbjct: 620 HQRIHTGERPYTCGECGKSFRYKESLKDHLRVHSGGP 656

Binds to the U5 repressive element (U5RE) of the human T cell leukemia virus type I long terminal repeat. It recognizes the 5'-TCCACCCC-3' sequence as a core motif and exerts a strong repressive effect on HTLV-I LTR-mediated expression.

Homo sapiens (taxid: 9606)

>sp|A0MS83|ZN148_DANRE Zinc finger protein 148 OS=Danio rerio GN=znf148 PE=2 SV=2

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 2/109 (1%)

Query: 33  NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHS 92
           +Q PK   C HCN AF  N  L+ H+ IHTGE+P++C+   C   F +   L RH++IH+
Sbjct: 174 HQNPKSHICEHCNAAFRTNYHLQRHVFIHTGEKPFQCN--QCDMRFIQKYLLQRHEKIHT 231

Query: 93  GLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYTSVIL 141
           G +P+ C  CG KF +K H+++H RTH  +  Y   Y + +   T  +L
Sbjct: 232 GEKPFRCDECGMKFIQKYHMERHKRTHSGEKPYQCDYCHQFFSRTDRVL 280

Involved in transcriptional regulation. Represses the transcription of a number of genes. Required for primitive and definitive hematopoiesis during embryonic development.

Danio rerio (taxid: 7955)

>sp|Q96BV0|ZN775_HUMAN Zinc finger protein 775 OS=Homo sapiens GN=ZNF775 PE=2 SV=2

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 46/93 (49%), Positives = 58/93 (62%), Gaps = 2/93 (2%)

Query: 36  PKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLR 95
           P++F C  C  +F+    L  H RIHTGERPY C    CG+ F++   LTRH R H+G R
Sbjct: 278 PRQFICNECGKSFTWWSSLNIHQRIHTGERPYACP--ECGRRFSQKPNLTRHLRNHTGER 335

Query: 96  PYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC 128
           P+PC HCG+ F +K HL KHLRTH P  +   C
Sbjct: 336 PHPCPHCGRGFRQKQHLLKHLRTHLPGAQAAPC 368

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P18714|ZG20_XENLA Gastrula zinc finger protein xFG20-1 OS=Xenopus laevis PE=3 SV=2

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 45/88 (51%), Positives = 59/88 (67%), Gaps = 3/88 (3%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
           K F+C  C+  FSN  QL+ H+R+HTGE+PY C  E CGKSF     L  H+R H+G +P
Sbjct: 116 KPFSCTECDKTFSNKAQLEKHLRVHTGEKPYSC--EQCGKSFAHKCVLDSHQRTHTGDKP 173

Query: 97  YPCTHCGKKFGRKDHLKKHLRTH-FPQP 123
           + CT CGKKF ++ +L KHL+TH   QP
Sbjct: 174 FSCTECGKKFSQRGNLHKHLKTHKLDQP 201

May be involved in transcriptional regulation.

Xenopus laevis (taxid: 8355)

>sp|Q8BI73|ZN775_MOUSE Zinc finger protein 775 OS=Mus musculus GN=Znf775 PE=2 SV=1

 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 66/120 (55%), Gaps = 6/120 (5%)

Query: 13  YWSNLALEYFKSHEQSMKAKNQ----RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYK 68
            W  L   ++  H     A ++      ++F C  C  +F+    L  H RIHTGERPY 
Sbjct: 249 VWLGLCRSWWGQHGVRTTAHSRLGPSEQRQFICNDCGKSFTWWSSLNIHQRIHTGERPYA 308

Query: 69  CDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC 128
           C    CG+ F++   LTRH R H+G RP+PC+HCG+ F +K HL KHLRTH P  +   C
Sbjct: 309 CP--ECGRCFSQKPNLTRHLRNHTGERPHPCSHCGRSFRQKQHLLKHLRTHLPGAQAARC 366

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q9EPW2|KLF15_MOUSE Krueppel-like factor 15 OS=Mus musculus GN=Klf15 PE=2 SV=1

 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 1/82 (1%)

Query: 42  PHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
           P C+  ++ +  LK H+R HTGE+P+ C    CG  F+R++EL+RH+R HSG++PY C  
Sbjct: 325 PGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPYQCPV 384

Query: 102 CGKKFGRKDHLKKHLRTH-FPQ 122
           C KKF R DHL KH++ H FP+
Sbjct: 385 CEKKFARSDHLSKHIKVHRFPR 406

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	141
195451027	284	GK13762 [Drosophila willistoni] gi|19416	0.907	0.450	0.628	8e-47
195036202	288	GH18734 [Drosophila grimshawi] gi|193893	0.886	0.434	0.635	5e-46
194743628	300	GF16814 [Drosophila ananassae] gi|190627	0.907	0.426	0.628	7e-46
195400138	295	GJ14181 [Drosophila virilis] gi|19414223	0.886	0.423	0.635	8e-46
195156806	292	GL12325 [Drosophila persimilis] gi|19845	0.907	0.438	0.621	8e-46
195110447	291	GI22886 [Drosophila mojavensis] gi|19391	0.886	0.429	0.635	8e-46
195568159	297	GD19684 [Drosophila simulans] gi|1941980	0.907	0.430	0.628	1e-44
195343395	297	GM10707 [Drosophila sechellia] gi|194133	0.907	0.430	0.628	1e-44
194898460	300	GG11643 [Drosophila erecta] gi|190650513	0.907	0.426	0.628	1e-44
195497044	295	GE25358 [Drosophila yakuba] gi|194182035	0.907	0.433	0.621	6e-44

>gi|195451027|ref|XP_002072737.1| GK13762 [Drosophila willistoni] gi|194168822|gb|EDW83723.1| GK13762 [Drosophila willistoni]

 Score =  191 bits (485), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 88/140 (62%), Positives = 108/140 (77%), Gaps = 12/140 (8%)

Query: 7   GGSLDPYWSNLALEYF------KSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRI 60
           G ++DP+   L  + +       +  ++M A+ QRPKKF CPHC+VAFSNNGQLKGHIRI
Sbjct: 144 GFAMDPFTLGLMEQEYARVMAEDAQLKAMNARKQRPKKFKCPHCDVAFSNNGQLKGHIRI 203

Query: 61  HTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHF 120
           HTGERP+KCD + CGK+FTRNEELTRHKRIH+GLRPYPC+ CGKKFGR+DHLKKH++TH 
Sbjct: 204 HTGERPFKCDVDTCGKTFTRNEELTRHKRIHTGLRPYPCSACGKKFGRRDHLKKHMKTHM 263

Query: 121 PQPR------YVSCYPYMYG 134
           PQ R      +V  YPY+YG
Sbjct: 264 PQERQLAPAIFVPMYPYLYG 283

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195036202|ref|XP_001989560.1| GH18734 [Drosophila grimshawi] gi|193893756|gb|EDV92622.1| GH18734 [Drosophila grimshawi]

 Score =  188 bits (478), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 87/137 (63%), Positives = 106/137 (77%), Gaps = 12/137 (8%)

Query: 10  LDPYWSNLALEYF------KSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTG 63
           +DP+   L  + +       +  +++ A+ QRPKKF CPHC+VAFSNNGQLKGHIRIHTG
Sbjct: 151 MDPFTIGLMEQEYARVMAEDAQLKALNARKQRPKKFKCPHCDVAFSNNGQLKGHIRIHTG 210

Query: 64  ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQP 123
           ERP+KCD E CGK+FTRNEELTRHKRIHSGLRPYPC+ CGKKFGR+DHLKKH++TH PQ 
Sbjct: 211 ERPFKCDVETCGKTFTRNEELTRHKRIHSGLRPYPCSACGKKFGRRDHLKKHMKTHMPQE 270

Query: 124 R------YVSCYPYMYG 134
           R      ++  YPY+YG
Sbjct: 271 RQLGPAIFMPMYPYLYG 287

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194743628|ref|XP_001954302.1| GF16814 [Drosophila ananassae] gi|190627339|gb|EDV42863.1| GF16814 [Drosophila ananassae]

 Score =  188 bits (477), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 88/140 (62%), Positives = 106/140 (75%), Gaps = 12/140 (8%)

Query: 7   GGSLDPYWSNLALEYF------KSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRI 60
           G  +DP+   L  + +       +  +++ A+ QRPKKF CPHC+VAFSNNGQLKGHIRI
Sbjct: 160 GFGMDPFTLGLMEQEYARVMAEDAQLKALNARKQRPKKFKCPHCDVAFSNNGQLKGHIRI 219

Query: 61  HTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHF 120
           HTGERP+KCD + CGK+FTRNEELTRHKRIHSGLRPYPC  CGKKFGR+DHLKKH++TH 
Sbjct: 220 HTGERPFKCDVDTCGKTFTRNEELTRHKRIHSGLRPYPCNACGKKFGRRDHLKKHMKTHM 279

Query: 121 PQPR------YVSCYPYMYG 134
           PQ R      +V  YPY+YG
Sbjct: 280 PQERQLGPAIFVPMYPYLYG 299

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195400138|ref|XP_002058675.1| GJ14181 [Drosophila virilis] gi|194142235|gb|EDW58643.1| GJ14181 [Drosophila virilis]

 Score =  188 bits (477), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 87/137 (63%), Positives = 106/137 (77%), Gaps = 12/137 (8%)

Query: 10  LDPYWSNLALEYF------KSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTG 63
           +DP+   L  + +       +  +++ A+ QRPKKF CPHC+VAFSNNGQLKGHIRIHTG
Sbjct: 158 MDPFTLGLMEQEYARVMAEDAQLKALNARKQRPKKFKCPHCDVAFSNNGQLKGHIRIHTG 217

Query: 64  ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQP 123
           ERP+KCD E CGK+FTRNEELTRHKRIHSGLRPYPC+ CGKKFGR+DHLKKH++TH PQ 
Sbjct: 218 ERPFKCDVETCGKTFTRNEELTRHKRIHSGLRPYPCSACGKKFGRRDHLKKHMKTHMPQE 277

Query: 124 R------YVSCYPYMYG 134
           R      ++  YPY+YG
Sbjct: 278 RQLGQAIFMPMYPYLYG 294

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195156806|ref|XP_002019287.1| GL12325 [Drosophila persimilis] gi|198454488|ref|XP_001359609.2| GA22020 [Drosophila pseudoobscura pseudoobscura] gi|194115878|gb|EDW37921.1| GL12325 [Drosophila persimilis] gi|198132816|gb|EAL28759.2| GA22020 [Drosophila pseudoobscura pseudoobscura]

 Score =  188 bits (477), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 87/140 (62%), Positives = 107/140 (76%), Gaps = 12/140 (8%)

Query: 7   GGSLDPYWSNLALEYF------KSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRI 60
           G  +DP+   L  + +       +  +++ A+ QRPKKF CPHC+VAFSNNGQLKGHIRI
Sbjct: 152 GFGMDPFTLGLMEQEYARVMAEDAQLKALNARKQRPKKFKCPHCDVAFSNNGQLKGHIRI 211

Query: 61  HTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHF 120
           HTGERP+KCD + CGK+FTRNEELTRHKRIH+GLRPYPC+ CGKKFGR+DHLKKH++TH 
Sbjct: 212 HTGERPFKCDVDTCGKTFTRNEELTRHKRIHTGLRPYPCSACGKKFGRRDHLKKHMKTHM 271

Query: 121 PQPR------YVSCYPYMYG 134
           PQ R      +V  YPY+YG
Sbjct: 272 PQERQLGPAIFVPMYPYLYG 291

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195110447|ref|XP_001999791.1| GI22886 [Drosophila mojavensis] gi|193916385|gb|EDW15252.1| GI22886 [Drosophila mojavensis]

 Score =  188 bits (477), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 87/137 (63%), Positives = 106/137 (77%), Gaps = 12/137 (8%)

Query: 10  LDPYWSNLALEYF------KSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTG 63
           +DP+   L  + +       +  +++ A+ QRPKKF CPHC+VAFSNNGQLKGHIRIHTG
Sbjct: 154 MDPFTLGLMEQEYARVMAEDAQLKALNARKQRPKKFKCPHCDVAFSNNGQLKGHIRIHTG 213

Query: 64  ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQP 123
           ERP+KCD E CGK+FTRNEELTRHKRIHSGLRPYPC+ CGKKFGR+DHLKKH++TH PQ 
Sbjct: 214 ERPFKCDVETCGKTFTRNEELTRHKRIHSGLRPYPCSACGKKFGRRDHLKKHMKTHMPQE 273

Query: 124 R------YVSCYPYMYG 134
           R      ++  YPY+YG
Sbjct: 274 RQLGPAIFMPMYPYLYG 290

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195568159|ref|XP_002102085.1| GD19684 [Drosophila simulans] gi|194198012|gb|EDX11588.1| GD19684 [Drosophila simulans]

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 88/140 (62%), Positives = 106/140 (75%), Gaps = 12/140 (8%)

Query: 7   GGSLDPYWSNLALEYFK---SHEQSMKAKN---QRPKKFNCPHCNVAFSNNGQLKGHIRI 60
           G  +DP+   L  + +    + +  +KA N   QRPKKF CP+C+VAFSNNGQLKGHIRI
Sbjct: 157 GFGMDPFTMGLMEQEYARVMAEDAQLKALNSRKQRPKKFKCPNCDVAFSNNGQLKGHIRI 216

Query: 61  HTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHF 120
           HTGERP+KCD   CGK+FTRNEELTRHKRIH+GLRPYPC+ CGKKFGR+DHLKKH++TH 
Sbjct: 217 HTGERPFKCDVNTCGKTFTRNEELTRHKRIHTGLRPYPCSACGKKFGRRDHLKKHMKTHM 276

Query: 121 PQPR------YVSCYPYMYG 134
           PQ R      +V  YPY+YG
Sbjct: 277 PQERQLGPSIFVPMYPYLYG 296

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195343395|ref|XP_002038283.1| GM10707 [Drosophila sechellia] gi|194133304|gb|EDW54820.1| GM10707 [Drosophila sechellia]

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 88/140 (62%), Positives = 106/140 (75%), Gaps = 12/140 (8%)

Query: 7   GGSLDPYWSNLALEYFK---SHEQSMKAKN---QRPKKFNCPHCNVAFSNNGQLKGHIRI 60
           G  +DP+   L  + +    + +  +KA N   QRPKKF CP+C+VAFSNNGQLKGHIRI
Sbjct: 157 GFGMDPFTMGLMEQEYARVMAEDAQLKALNSRKQRPKKFKCPNCDVAFSNNGQLKGHIRI 216

Query: 61  HTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHF 120
           HTGERP+KCD   CGK+FTRNEELTRHKRIH+GLRPYPC+ CGKKFGR+DHLKKH++TH 
Sbjct: 217 HTGERPFKCDVNTCGKTFTRNEELTRHKRIHTGLRPYPCSACGKKFGRRDHLKKHMKTHM 276

Query: 121 PQPR------YVSCYPYMYG 134
           PQ R      +V  YPY+YG
Sbjct: 277 PQERQLGPSIFVPMYPYLYG 296

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194898460|ref|XP_001978810.1| GG11643 [Drosophila erecta] gi|190650513|gb|EDV47768.1| GG11643 [Drosophila erecta]

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 88/140 (62%), Positives = 107/140 (76%), Gaps = 12/140 (8%)

Query: 7   GGSLDPYWSNLALEYFK---SHEQSMKAKN---QRPKKFNCPHCNVAFSNNGQLKGHIRI 60
           G  +DP+  +L  + +    + +  +KA N   QRPKKF CP+C+VAFSNNGQLKGHIRI
Sbjct: 160 GFGMDPFTMSLMEQEYARVMAEDAQLKALNSRKQRPKKFKCPNCDVAFSNNGQLKGHIRI 219

Query: 61  HTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHF 120
           HTGERP+KCD   CGK+FTRNEELTRHKRIH+GLRPYPC+ CGKKFGR+DHLKKH++TH 
Sbjct: 220 HTGERPFKCDVNTCGKTFTRNEELTRHKRIHTGLRPYPCSACGKKFGRRDHLKKHMKTHM 279

Query: 121 PQPR------YVSCYPYMYG 134
           PQ R      +V  YPY+YG
Sbjct: 280 PQERQLGPSIFVPMYPYLYG 299

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195497044|ref|XP_002095934.1| GE25358 [Drosophila yakuba] gi|194182035|gb|EDW95646.1| GE25358 [Drosophila yakuba]

 Score =  181 bits (460), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 87/140 (62%), Positives = 105/140 (75%), Gaps = 12/140 (8%)

Query: 7   GGSLDPYWSNLALEYFK---SHEQSMKAKN---QRPKKFNCPHCNVAFSNNGQLKGHIRI 60
           G  +DP+   L  + +    + +  +KA N   QRPKKF CP+C+VAFSNNGQLKGHIRI
Sbjct: 155 GFGMDPFTMGLMEQEYARVMAEDAQLKALNSRKQRPKKFKCPNCDVAFSNNGQLKGHIRI 214

Query: 61  HTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHF 120
           HTGERP+KCD   CGK+FTRNEELTRHKRIH+GLRPYPC+ CGKKFGR+DHLKKH++TH 
Sbjct: 215 HTGERPFKCDVSTCGKTFTRNEELTRHKRIHTGLRPYPCSACGKKFGRRDHLKKHMKTHM 274

Query: 121 PQPR------YVSCYPYMYG 134
           P  R      +V  YPY+YG
Sbjct: 275 PMERQLGPSIFVPMYPYLYG 294

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	141
FB|FBgn0261434	297	hkb "huckebein" [Drosophila me	0.907	0.430	0.635	1e-45
UNIPROTKB|Q26364	296	hkb "Hkb protein" [Drosophila	0.907	0.432	0.635	1e-45
UNIPROTKB|E1BNM7	640	ZNF398 "Uncharacterized protei	0.624	0.137	0.510	8.3e-23
ZFIN|ZDB-GENE-071004-66	346	zgc:173816 "zgc:173816" [Danio	0.716	0.291	0.462	1e-22
ZFIN|ZDB-GENE-080219-37	339	zgc:171604 "zgc:171604" [Danio	0.723	0.300	0.444	1.3e-22
UNIPROTKB|F1MP77	833	F1MP77 "Uncharacterized protei	0.617	0.104	0.571	1.5e-22
UNIPROTKB|H9L1H6	738	LOC100858045 "Uncharacterized	0.602	0.115	0.529	1.6e-22
UNIPROTKB|F1NVC4	275	LOC419834 "Uncharacterized pro	0.638	0.327	0.489	2.1e-22
UNIPROTKB|H9L1H7	869	LOC100858045 "Uncharacterized	0.602	0.097	0.529	2.1e-22
UNIPROTKB|I3L7P6	634	ZNF398 "Uncharacterized protei	0.645	0.143	0.494	2.1e-22

FB|FBgn0261434 hkb "huckebein" [Drosophila melanogaster (taxid:7227)]

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 89/140 (63%), Positives = 106/140 (75%)

Query:     7 GGSLDPYWSNLA-LEYFK--SHEQSMKAKN---QRPKKFNCPHCNVAFSNNGQLKGHIRI 60
             G  +DP+   L   EY +  + +  +KA N   QRPKKF CP+C+VAFSNNGQLKGHIRI
Sbjct:   157 GFGMDPFTMGLMEQEYARVMAEDAQLKALNSRKQRPKKFKCPNCDVAFSNNGQLKGHIRI 216

Query:    61 HTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHF 120
             HTGERP+KCD   CGK+FTRNEELTRHKRIH+GLRPYPC+ CGKKFGR+DHLKKH++TH 
Sbjct:   217 HTGERPFKCDVNTCGKTFTRNEELTRHKRIHTGLRPYPCSACGKKFGRRDHLKKHMKTHM 276

Query:   121 PQPR------YVSCYPYMYG 134
             PQ R      +V  Y Y+YG
Sbjct:   277 PQERQLGPSIFVPMYSYLYG 296

GO:0007375 "anterior midgut invagination" evidence=NAS

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0007374 "posterior midgut invagination" evidence=NAS

GO:0005634 "nucleus" evidence=ISS;IDA

GO:0007417 "central nervous system development" evidence=IGI

GO:0008354 "germ cell migration" evidence=IMP;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0008134 "transcription factor binding" evidence=IPI

GO:0006351 "transcription, DNA-dependent" evidence=NAS

GO:0009948 "anterior/posterior axis specification" evidence=TAS

GO:0007369 "gastrulation" evidence=NAS

GO:0008293 "torso signaling pathway" evidence=TAS

GO:0007362 "terminal region determination" evidence=TAS

GO:0001708 "cell fate specification" evidence=TAS

GO:0007435 "salivary gland morphogenesis" evidence=IGI;IMP;TAS

GO:0007499 "ectoderm and mesoderm interaction" evidence=NAS

GO:0001706 "endoderm formation" evidence=TAS

GO:0035239 "tube morphogenesis" evidence=IMP

GO:0016044 "cellular membrane organization" evidence=IMP;TAS

GO:0007431 "salivary gland development" evidence=TAS

GO:0007419 "ventral cord development" evidence=TAS

GO:0007400 "neuroblast fate determination" evidence=TAS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0010001 "glial cell differentiation" evidence=IMP

GO:0007492 "endoderm development" evidence=IMP

GO:0046331 "lateral inhibition" evidence=IMP

UNIPROTKB|Q26364 hkb "Hkb protein" [Drosophila sp. (taxid:7242)]

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 89/140 (63%), Positives = 106/140 (75%)

Query:     7 GGSLDPYWSNLA-LEYFK--SHEQSMKAKN---QRPKKFNCPHCNVAFSNNGQLKGHIRI 60
             G  +DP+   L   EY +  + +  +KA N   QRPKKF CP+C+VAFSNNGQLKGHIRI
Sbjct:   156 GFGMDPFTMGLMEQEYARVMAEDAQLKALNSRKQRPKKFKCPNCDVAFSNNGQLKGHIRI 215

Query:    61 HTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHF 120
             HTGERP+KCD   CGK+FTRNEELTRHKRIH+GLRPYPC+ CGKKFGR+DHLKKH++TH 
Sbjct:   216 HTGERPFKCDVNTCGKTFTRNEELTRHKRIHTGLRPYPCSACGKKFGRRDHLKKHMKTHM 275

Query:   121 PQPR------YVSCYPYMYG 134
             PQ R      +V  Y Y+YG
Sbjct:   276 PQERQLGPSIFVPMYSYLYG 295

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0001706 "endoderm formation" evidence=TAS

GO:0001708 "cell fate specification" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=NAS

GO:0007362 "terminal region determination" evidence=TAS

GO:0007369 "gastrulation" evidence=NAS

GO:0007374 "posterior midgut invagination" evidence=NAS

GO:0007400 "neuroblast fate determination" evidence=TAS

GO:0007417 "central nervous system development" evidence=IGI

GO:0007419 "ventral cord development" evidence=TAS

GO:0007431 "salivary gland development" evidence=TAS

GO:0007435 "salivary gland morphogenesis" evidence=IGI;IMP;TAS

GO:0007492 "endoderm development" evidence=IMP

GO:0007499 "ectoderm and mesoderm interaction" evidence=NAS

GO:0008134 "transcription factor binding" evidence=IPI

GO:0008293 "torso signaling pathway" evidence=TAS

GO:0008354 "germ cell migration" evidence=IMP;TAS

GO:0009948 "anterior/posterior axis specification" evidence=TAS

GO:0010001 "glial cell differentiation" evidence=IMP

GO:0016044 "cellular membrane organization" evidence=IMP;TAS

GO:0035239 "tube morphogenesis" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0046331 "lateral inhibition" evidence=IMP

UNIPROTKB|E1BNM7 ZNF398 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 257 (95.5 bits), Expect = 8.3e-23, Sum P(2) = 8.3e-23
 Identities = 47/92 (51%), Positives = 58/92 (63%)

Query:    34 QRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
             +RP  F+CP C + F+ +  L  H  IHTGERPY C   +C KSF R E L  H+R+H+G
Sbjct:   478 ERP--FSCPQCGIDFNGHSALIRHQMIHTGERPYPCT--DCSKSFMRKEHLLNHRRLHTG 533

Query:    94 LRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRY 125
              RP+ CTHCGK F RK HL KH R H  +  Y
Sbjct:   534 ERPFSCTHCGKSFIRKHHLMKHQRIHTGERPY 565

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-071004-66 zgc:173816 "zgc:173816" [Danio rerio (taxid:7955)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 50/108 (46%), Positives = 70/108 (64%)

Query:    18 ALEYFKSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKS 77
             A+E  K H+  M    ++P K  C HCN  FS+ G LK H R HTGE+PYKC   +C K 
Sbjct:   133 AVE-LKRHQ--MNHTGEKPYK--CSHCNKRFSHTGHLKTHERNHTGEKPYKCS--HCDKR 185

Query:    78 FTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRY 125
             F+++E L RH+RIH+G +PY C+HC K+F + ++LK+H R H  +  Y
Sbjct:   186 FSQSENLKRHERIHTGEKPYKCSHCDKRFSQPENLKRHERIHTGEKPY 233

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-080219-37 zgc:171604 "zgc:171604" [Danio rerio (taxid:7955)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 48/108 (44%), Positives = 65/108 (60%)

Query:    24 SHEQSM---KAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTR 80
             SH+Q++   K  +   K F C HC   F   G LK H R+H GERPY C  + CGKSF+ 
Sbjct:   153 SHKQNLEIHKTIHTGEKPFACQHCGKRFGQMGNLKVHFRVHFGERPYTC--QQCGKSFSH 210

Query:    81 NEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC 128
                L  HK+IH+G +P+ C HCGK+F +  +LK H+R HF +  Y +C
Sbjct:   211 KHNLEIHKKIHTGEKPFACQHCGKRFSQMSNLKVHIRVHFGERPY-TC 257

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1MP77 F1MP77 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 272 (100.8 bits), Expect = 1.5e-22, P = 1.5e-22
 Identities = 52/91 (57%), Positives = 58/91 (63%)

Query:    34 QRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
             +RP K  C  CN AF     L  H R+HTGERPYKC    CGK+F R   L+ H+RIH+G
Sbjct:   747 ERPHK--CKDCNKAFHRRSLLTQHQRVHTGERPYKCT--ECGKAFGRYSTLSTHQRIHTG 802

Query:    94 LRPYPCTHCGKKFGRKDHLKKHLRTHFPQPR 124
              RPY CT CGK F R DHL KHLRTH  Q R
Sbjct:   803 ERPYKCTACGKAFSRSDHLSKHLRTHTRQKR 833

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|H9L1H6 LOC100858045 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 271 (100.5 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 45/85 (52%), Positives = 56/85 (65%)

Query:    35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGL 94
             R + F CP C  +F ++  LK H RIHTG+RP++C    CGKSF R+ +LTRHK IH+G 
Sbjct:   453 RERPFQCPECGKSFKSSSALKRHQRIHTGQRPFQCPCSECGKSFKRSSQLTRHKHIHTGW 512

Query:    95 RPYPCTHCGKKFGRKDHLKKHLRTH 119
             RPY C+ CGK F R  HL  H R H
Sbjct:   513 RPYMCSECGKSFKRSSHLTCHQRIH 537

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1NVC4 LOC419834 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 45/92 (48%), Positives = 60/92 (65%)

Query:    30 KAKNQRPKKFNCPH--CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRH 87
             KA     +   CPH  C+  ++ +  LK HIR HTGE+PY C   +CG  F+R++EL+RH
Sbjct:   183 KAPTAPLRVHKCPHPGCSKVYTKSSHLKAHIRRHTGEKPYSCAWPDCGWRFSRSDELSRH 242

Query:    88 KRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
             KR HSG++PY C  C K+F R DHL KH+R H
Sbjct:   243 KRSHSGVKPYQCAACQKRFARSDHLAKHVRIH 274

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|H9L1H7 LOC100858045 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 271 (100.5 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 45/85 (52%), Positives = 56/85 (65%)

Query:    35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGL 94
             R + F CP C  +F ++  LK H RIHTG+RP++C    CGKSF R+ +LTRHK IH+G 
Sbjct:   503 RERPFQCPECGKSFKSSSALKRHQRIHTGQRPFQCPCSECGKSFKRSSQLTRHKHIHTGW 562

Query:    95 RPYPCTHCGKKFGRKDHLKKHLRTH 119
             RPY C+ CGK F R  HL  H R H
Sbjct:   563 RPYMCSECGKSFKRSSHLTCHQRIH 587

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|I3L7P6 ZNF398 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 254 (94.5 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
 Identities = 48/97 (49%), Positives = 59/97 (60%)

Query:    34 QRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
             +RP  F+CP C + F+ +  L  H  IHTGERPY C   +C KSF R E L  H+R+H+G
Sbjct:   472 ERP--FSCPQCGIDFNGHSALIRHQMIHTGERPYPCP--DCSKSFMRKEHLLNHRRLHTG 527

Query:    94 LRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRY--VSC 128
              RP+ C HCGK F RK HL KH R H  +  Y   SC
Sbjct:   528 ERPFSCAHCGKSFIRKHHLMKHQRIHTGERPYPCASC 564

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	141
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	6e-06
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	3e-05
COG5189	423	COG5189, SFP1, Putative transcriptional repressor	2e-04
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	5e-04
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	6e-04
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.002
pfam00096	22	pfam00096, zf-C2H2, Zinc finger, C2H2 type	0.004

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 44.3 bits (104), Expect = 6e-06
 Identities = 28/69 (40%), Positives = 42/69 (60%)

Query: 24 SHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEE 83
          + + ++K+ +  P+  +CP+C  +FS    L  HIR HTGE+P +C    C KSF+R  E
Sbjct: 19 TPKSTLKSLSNAPRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLE 78

Query: 84 LTRHKRIHS 92
          L+RH R H 
Sbjct: 79 LSRHLRTHH 87

Length = 467

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 42.4 bits (99), Expect = 3e-05
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 6/90 (6%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIR--IHTGE--RPYKCDAENCGKSFTRNEELTRHKRIHS 92
                  CN++FS +  L  H+R   H+GE  +P+ C    CGK F+RN+ L RH  +H+
Sbjct: 288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHT 347

Query: 93  GLRPYPC--THCGKKFGRKDHLKKHLRTHF 120
            + P      +   KF    + +       
Sbjct: 348 SISPAKEKLLNSSSKFSPLLNNEPPQSLQQ 377

Length = 467

>gnl|CDD|227516 COG5189, SFP1, Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

 Score = 39.7 bits (92), Expect = 2e-04
 Identities = 21/99 (21%), Positives = 32/99 (32%), Gaps = 24/99 (24%)

Query: 45  NVAFSNNGQL----KGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKR----------- 89
           N   ++ G+        +      +PYKC  E C K +     L  H             
Sbjct: 324 NGKLAHGGERNIDTPSRMLKVKDGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHEN 383

Query: 90  --------IHSGLRPYPCTHCGKKFGRKDHLKKHLRTHF 120
                     +  +PY C  C K++   + LK H R H 
Sbjct: 384 PSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYH-RKHS 421

Length = 423

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 38.5 bits (89), Expect = 5e-04
 Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 65  RPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH--CGKKFGRKDHLKKHLRTHFPQ 122
           RP  C   NC  SF+R E LTRH R H+G +P  C++  C K F R   L +HLRTH   
Sbjct: 32  RPDSCP--NCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHHNN 89

Query: 123 PRYVSCYP 130
           P  ++   
Sbjct: 90  PSDLNSKS 97

Length = 467

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 35.1 bits (81), Expect = 6e-04
 Identities = 13/26 (50%), Positives = 15/26 (57%)

Query: 83  ELTRHKRIHSGLRPYPCTHCGKKFGR 108
            L RH R H+G +PY C  CGK F  
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 33.5 bits (77), Expect = 0.002
 Identities = 16/27 (59%), Positives = 20/27 (74%), Gaps = 2/27 (7%)

Query: 54 LKGHIRIHTGERPYKCDAENCGKSFTR 80
          L+ H+R HTGE+PYKC    CGKSF+ 
Sbjct: 2  LRRHMRTHTGEKPYKCP--VCGKSFSS 26

Length = 26

>gnl|CDD|200998 pfam00096, zf-C2H2, Zinc finger, C2H2 type

 Score = 32.7 bits (75), Expect = 0.004
 Identities = 14/21 (66%), Positives = 16/21 (76%)

Query: 99  CTHCGKKFGRKDHLKKHLRTH 119
           C  CGK F RK +LK+HLRTH
Sbjct: 2   CPDCGKSFSRKSNLKRHLRTH 22

The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter. Length = 22

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	141
KOG2462|consensus	279		99.91
KOG2462|consensus	279		99.85
KOG1074|consensus	958		99.54
KOG3576|consensus	267		99.53
KOG3623|consensus	1007		99.5
KOG3623|consensus	1007		99.43
KOG3576|consensus	267		99.42
KOG3608|consensus	467		99.4
KOG3608|consensus	467		99.27
KOG1074|consensus	958		98.96
PHA00733	128	hypothetical protein	98.94
PHA00733	128	hypothetical protein	98.75
PLN03086	567	PRLI-interacting factor K; Provisional	98.71
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.7
PHA02768	55	hypothetical protein; Provisional	98.66
PHA02768	55	hypothetical protein; Provisional	98.66
PLN03086	567	PRLI-interacting factor K; Provisional	98.48
PHA00616	44	hypothetical protein	98.37
PHA00616	44	hypothetical protein	98.32
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.21
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.92
PHA00732	79	hypothetical protein	97.83
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.82
PHA00732	79	hypothetical protein	97.76
KOG3993|consensus	500		97.75
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.68
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.68
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.61
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.55
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.55
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.44
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.41
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.26
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.14
smart00355	26	ZnF_C2H2 zinc finger.	96.92
smart00355	26	ZnF_C2H2 zinc finger.	96.9
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.86
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.62
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.27
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.2
KOG3993|consensus	500		96.11
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.94
COG5189	423	SFP1 Putative transcriptional repressor regulating	95.83
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.68
PRK04860	160	hypothetical protein; Provisional	94.71
PRK04860	160	hypothetical protein; Provisional	94.51
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.88
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.2
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	91.54
COG5048	467	FOG: Zn-finger [General function prediction only]	87.98
KOG1146|consensus	1406		86.48
KOG4173|consensus	253		85.11
KOG2231|consensus	669		84.67
KOG4173|consensus	253		82.22
KOG2893|consensus	341		81.05
COG4049	65	Uncharacterized protein containing archaeal-type C	80.05

>KOG2462|consensus

Probab=99.91  E-value=2.1e-25  Score=148.95  Aligned_cols=123  Identities=29%  Similarity=0.543  Sum_probs=107.3

Q ss_pred             CCCchhhHHHHHHHHhhHHHHHhh-----cCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHh
Q psy17779          9 SLDPYWSNLALEYFKSHEQSMKAK-----NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEE   83 (141)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~   83 (141)
                      ..+.+.|..|++.+.+...+-.++     ....+.+.|++|++.|.+...|+.|+++|.  .+..|.  +||+.|...+-
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~--iCGKaFSRPWL  202 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECG--ICGKAFSRPWL  202 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccc--cccccccchHH
Confidence            356788889999888765443322     234677999999999999999999999998  567787  99999999999


Q ss_pred             HHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccccccccccccc
Q psy17779         84 LTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYT  137 (141)
Q Consensus        84 l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~  137 (141)
                      |+.|++.|+|||||.|..|+++|...++|+.|+++|.+.|+|.|-  -|.++|+
T Consensus       203 LQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~--~C~KsFs  254 (279)
T KOG2462|consen  203 LQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCP--RCGKSFA  254 (279)
T ss_pred             hhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCc--chhhHHH
Confidence            999999999999999999999999999999999999999999877  8888884

>KOG2462|consensus

Probab=99.85  E-value=3.8e-22  Score=133.41  Aligned_cols=106  Identities=32%  Similarity=0.609  Sum_probs=98.7

Q ss_pred             CchhhHHHHHHHHhhHHHHHhhcCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHH
Q psy17779         11 DPYWSNLALEYFKSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRI   90 (141)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~   90 (141)
                      -.+.|..|.+.|.+-.++..+.....-+++|.+||+.|.....|+.|+++|+|++||.|.  .|++.|.+.++|..||+.
T Consensus       160 ka~~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~--hC~kAFADRSNLRAHmQT  237 (279)
T KOG2462|consen  160 KAFSCKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCP--HCGKAFADRSNLRAHMQT  237 (279)
T ss_pred             ccccCCCCCceeeehHHHhhHhhccCCCcccccccccccchHHhhcccccccCCCCccCC--cccchhcchHHHHHHHHh
Confidence            467889999999988888777766667899999999999999999999999999999998  899999999999999999


Q ss_pred             hCCCCCeeCccchhccCChHHHHHHHHh
Q psy17779         91 HSGLRPYPCTHCGKKFGRKDHLKKHLRT  118 (141)
Q Consensus        91 h~~~~~~~C~~C~~~f~~~~~l~~H~~~  118 (141)
                      |.+.|+|.|..|++.|...+.|..|...
T Consensus       238 HS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  238 HSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             hcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            9999999999999999999999999875

>KOG1074|consensus

Probab=99.54  E-value=3.6e-15  Score=112.56  Aligned_cols=71  Identities=30%  Similarity=0.599  Sum_probs=57.0

Q ss_pred             ccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccccc--c---ccccccccc
Q psy17779         67 YKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCY--P---YMYGGYTSV  139 (141)
Q Consensus        67 ~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~--~---~~~~~~~~~  139 (141)
                      -.|.  +|.+...=.+.|+.|.+.|+||+||+|++|+++|....+|+.|+.+|....++--+-  +   -|-+.|+.+
T Consensus       606 NqCi--iC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~  681 (958)
T KOG1074|consen  606 NQCI--ICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNA  681 (958)
T ss_pred             ccee--eeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccc
Confidence            3465  798888889999999999999999999999999999999999999987654433221  2   455666554

>KOG3576|consensus

Probab=99.53  E-value=2.2e-15  Score=97.24  Aligned_cols=96  Identities=31%  Similarity=0.622  Sum_probs=80.7

Q ss_pred             CCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHH
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKK  114 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~  114 (141)
                      +...|.|..|++.|.-...|.+|++-|...+.+.|-  .||+.|.+.-+|++|++.|+|.+||+|..|+++|.+.-.|..
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct--~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsles  191 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCT--FCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLES  191 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHh--hccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHH
Confidence            345588999999999999999999988888888887  799999999999999999999999999999999999999998


Q ss_pred             HHHhhC-----------CCCCcccccccc
Q psy17779        115 HLRTHF-----------PQPRYVSCYPYM  132 (141)
Q Consensus       115 H~~~h~-----------~~~~~~~~~~~~  132 (141)
                      |.+.-+           ++|-|+|.++++
T Consensus       192 hl~kvhgv~~~yaykerr~kl~vcedcg~  220 (267)
T KOG3576|consen  192 HLKKVHGVQHQYAYKERRAKLYVCEDCGY  220 (267)
T ss_pred             HHHHHcCchHHHHHHHhhhheeeecccCC
Confidence            876533           356777775544

>KOG3623|consensus

Probab=99.50  E-value=7e-15  Score=109.77  Aligned_cols=83  Identities=35%  Similarity=0.809  Sum_probs=78.5

Q ss_pred             cCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHH
Q psy17779         33 NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHL  112 (141)
Q Consensus        33 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l  112 (141)
                      +.....|.|-.|++.|-..++|.+|.-.|.|.+||.|.  +|.+.|...-.|..|++.|.|||||.|.+|+++|+..+.+
T Consensus       889 kte~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~--iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSY  966 (1007)
T KOG3623|consen  889 KTEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCI--ICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSY  966 (1007)
T ss_pred             cCccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccc--hhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccch
Confidence            34456799999999999999999999999999999998  9999999999999999999999999999999999999999


Q ss_pred             HHHHH
Q psy17779        113 KKHLR  117 (141)
Q Consensus       113 ~~H~~  117 (141)
                      .+|+.
T Consensus       967 SQHMN  971 (1007)
T KOG3623|consen  967 SQHMN  971 (1007)
T ss_pred             Hhhhc
Confidence            99986

>KOG3623|consensus

Probab=99.43  E-value=1.5e-13  Score=102.80  Aligned_cols=110  Identities=28%  Similarity=0.655  Sum_probs=75.9

Q ss_pred             CCCCCchhhHHHHHHHHhhHHHHHhhcCC-CCccccCcchhccCChHHHHHHHHHhCCC-------------CCccccCC
Q psy17779          7 GGSLDPYWSNLALEYFKSHEQSMKAKNQR-PKKFNCPHCNVAFSNNGQLKGHIRIHTGE-------------RPYKCDAE   72 (141)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~C~~C~~~f~~~~~l~~h~~~h~~~-------------~~~~c~~~   72 (141)
                      .+-....+|..--+.+.+.++++..++.. +..|.|..|..+|.....|.+|+..|...             +-|+|.  
T Consensus       208 sqlltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCt--  285 (1007)
T KOG3623|consen  208 SQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCT--  285 (1007)
T ss_pred             hhhhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhcccccc--
Confidence            33444555665556666666666555443 34477888888888888888887766432             236775  


Q ss_pred             ccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHh
Q psy17779         73 NCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRT  118 (141)
Q Consensus        73 ~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  118 (141)
                      .|++.|...-.|+.|+++|.|||||.|..|+++|+..+.+..|+..
T Consensus       286 ECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  286 ECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             ccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            7888888888888888888888888888888888877777777643

>KOG3576|consensus

Probab=99.42  E-value=1.2e-13  Score=89.35  Aligned_cols=115  Identities=30%  Similarity=0.524  Sum_probs=99.3

Q ss_pred             CCCchhhHHHHHHHHhhHHHHHhh--cCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHH
Q psy17779          9 SLDPYWSNLALEYFKSHEQSMKAK--NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTR   86 (141)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~   86 (141)
                      ..+.+.|.+|++.|.....+-.++  +...+.|.|..||+.|..--.|++|+++|++.+||.|.  .|++.|...-+|..
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~--~c~kaftqrcsles  191 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCS--LCEKAFTQRCSLES  191 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchh--hhhHHHHhhccHHH
Confidence            356889999999998776665555  45678899999999999999999999999999999998  99999999999999


Q ss_pred             HHHHhCC-----------CCCeeCccchhccCChHHHHHHHHhhCCCCCc
Q psy17779         87 HKRIHSG-----------LRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRY  125 (141)
Q Consensus        87 h~~~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  125 (141)
                      |++.-+|           ++.|.|..||..-..+..+..|+..|+...|.
T Consensus       192 hl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Spa  241 (267)
T KOG3576|consen  192 HLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSPA  241 (267)
T ss_pred             HHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCHH
Confidence            9875444           46799999999999999999999998765554

>KOG3608|consensus

Probab=99.40  E-value=1.7e-12  Score=90.19  Aligned_cols=127  Identities=22%  Similarity=0.477  Sum_probs=108.3

Q ss_pred             CCCCchhhHHHHHHHHhhHHHHHhhcCCCCccccCcchhccCChHHHHHHHHH-hCCCCCccccCCccCcccCChHhHHH
Q psy17779          8 GSLDPYWSNLALEYFKSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRI-HTGERPYKCDAENCGKSFTRNEELTR   86 (141)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~~~c~~~~C~~~~~~~~~l~~   86 (141)
                      .+.++|.|..|.+.|.+.+.+..++...+..|+|+.|+-+....++|..|++. |...+||+|+  .|+..+...++|.+
T Consensus       233 l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd--~Cd~~c~~esdL~k  310 (467)
T KOG3608|consen  233 LNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCD--ECDTRCVRESDLAK  310 (467)
T ss_pred             hcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHHHHHHHHhhhccCCCcccc--chhhhhccHHHHHH
Confidence            35668999999999999999999998888889999999999999999999984 7788999998  89999999999999


Q ss_pred             HHHHhCCCCCeeCcc--chhccCChHHHHHHHHhhC-CC--CCccccccccccccccc
Q psy17779         87 HKRIHSGLRPYPCTH--CGKKFGRKDHLKKHLRTHF-PQ--PRYVSCYPYMYGGYTSV  139 (141)
Q Consensus        87 h~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~-~~--~~~~~~~~~~~~~~~~~  139 (141)
                      |...|. +..|.|..  |...+.+...+.+|.+.++ |.  .+|.|=  .|++.|++|
T Consensus       311 H~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH--~Cdr~ft~G  365 (467)
T KOG3608|consen  311 HVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACH--CCDRFFTSG  365 (467)
T ss_pred             HHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeee--cchhhhccc
Confidence            999887 55689987  8888888888999987754 33  455544  788888876

>KOG3608|consensus

Probab=99.27  E-value=8.3e-12  Score=86.85  Aligned_cols=96  Identities=29%  Similarity=0.571  Sum_probs=71.0

Q ss_pred             CccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHH-HhCCCCCeeCccchhccCChHHHHHH
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKR-IHSGLRPYPCTHCGKKFGRKDHLKKH  115 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~-~h~~~~~~~C~~C~~~f~~~~~l~~H  115 (141)
                      .+|.|..|.+.|..+-.|..|++.|-.  .|+|+  .|+.+....++|..|++ .|..+|||+|..|++.|.+.++|..|
T Consensus       236 n~fqC~~C~KrFaTeklL~~Hv~rHvn--~ykCp--lCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH  311 (467)
T KOG3608|consen  236 NSFQCAQCFKRFATEKLLKSHVVRHVN--CYKCP--LCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKH  311 (467)
T ss_pred             CchHHHHHHHHHhHHHHHHHHHHHhhh--ccccc--ccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHH
Confidence            345566666666666666666655543  46776  89988899999999987 57788999999999999999999999


Q ss_pred             HHhhCCCCCccccc-ccccccccc
Q psy17779        116 LRTHFPQPRYVSCY-PYMYGGYTS  138 (141)
Q Consensus       116 ~~~h~~~~~~~~~~-~~~~~~~~~  138 (141)
                      ..+|.  ++-+.|+ +-|..+++|
T Consensus       312 ~~~HS--~~~y~C~h~~C~~s~r~  333 (467)
T KOG3608|consen  312 VQVHS--KTVYQCEHPDCHYSVRT  333 (467)
T ss_pred             HHhcc--ccceecCCCCCcHHHHH
Confidence            99887  4545553 556655543

>KOG1074|consensus

Probab=98.96  E-value=1.5e-10  Score=88.16  Aligned_cols=85  Identities=36%  Similarity=0.715  Sum_probs=77.0

Q ss_pred             CCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCC----CeeCc---cchhccC
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLR----PYPCT---HCGKKFG  107 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~----~~~C~---~C~~~f~  107 (141)
                      ...+.+|..|-+...-.+.|+.|+++|+|++||+|.  +|++.|....+|+.|+..|....    ++.|.   +|-+.|.
T Consensus       602 ~TdPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCK--iCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kft  679 (958)
T KOG1074|consen  602 RTDPNQCIICLRVLSCPSALQMHYRTHTGERPFKCK--ICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFT  679 (958)
T ss_pred             cCCccceeeeeecccchhhhhhhhhcccCcCccccc--cccchhccccchhhcccccccCccccccccCCchhhhccccc
Confidence            346688999999999999999999999999999998  99999999999999999887653    47888   8999999


Q ss_pred             ChHHHHHHHHhhCC
Q psy17779        108 RKDHLKKHLRTHFP  121 (141)
Q Consensus       108 ~~~~l~~H~~~h~~  121 (141)
                      ..-.|.+|+++|.+
T Consensus       680 n~V~lpQhIriH~~  693 (958)
T KOG1074|consen  680 NAVTLPQHIRIHLG  693 (958)
T ss_pred             ccccccceEEeecC
Confidence            99999999999983

>PHA00733 hypothetical protein

Probab=98.94  E-value=1.4e-09  Score=67.03  Aligned_cols=84  Identities=21%  Similarity=0.360  Sum_probs=68.2

Q ss_pred             CCCCccccCcchhccCChHHHHHH--HH---HhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCC
Q psy17779         34 QRPKKFNCPHCNVAFSNNGQLKGH--IR---IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGR  108 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f~~~~~l~~h--~~---~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~  108 (141)
                      ...+++.|..|...|.....|..+  .+   .+.+.++|.|.  .|++.|.....|..|++.+  +.++.|..|++.|..
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~--~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~  111 (128)
T PHA00733         36 PEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCP--LCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRN  111 (128)
T ss_pred             hhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCC--CCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCC
Confidence            345678899999888877766655  21   23457789997  8999999999999999876  457999999999999


Q ss_pred             hHHHHHHHHhhCC
Q psy17779        109 KDHLKKHLRTHFP  121 (141)
Q Consensus       109 ~~~l~~H~~~h~~  121 (141)
                      ...|..|++..++
T Consensus       112 ~~sL~~H~~~~h~  124 (128)
T PHA00733        112 TDSTLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHHHHhcC
Confidence            9999999987653

>PHA00733 hypothetical protein

Probab=98.75  E-value=3.9e-08  Score=60.68  Aligned_cols=79  Identities=22%  Similarity=0.382  Sum_probs=60.9

Q ss_pred             CchhhHHHHHHHHhhHHHHHh-------hcCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHh
Q psy17779         11 DPYWSNLALEYFKSHEQSMKA-------KNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEE   83 (141)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~   83 (141)
                      ....|.++...+.+-..+...       ...+.++|.|..|++.|.+...|..|++.+  ..++.|.  .|++.|.....
T Consensus        39 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~--~CgK~F~~~~s  114 (128)
T PHA00733         39 KRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCP--VCGKEFRNTDS  114 (128)
T ss_pred             hhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCC--CCCCccCCHHH
Confidence            356777877766544333222       234578899999999999999999999876  3468897  99999999999


Q ss_pred             HHHHHHHhCC
Q psy17779         84 LTRHKRIHSG   93 (141)
Q Consensus        84 l~~h~~~h~~   93 (141)
                      |..|+...++
T Consensus       115 L~~H~~~~h~  124 (128)
T PHA00733        115 TLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHhcC
Confidence            9999886554

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.71  E-value=5.4e-08  Score=72.92  Aligned_cols=91  Identities=20%  Similarity=0.476  Sum_probs=72.9

Q ss_pred             CccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCC--------
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGR--------  108 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~--------  108 (141)
                      +.+.|..|++.|. ...|..|+..++  .++.|+   |+..+ ....|..|+..|..++++.|..|+..+..        
T Consensus       452 ~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp---Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~  524 (567)
T PLN03086        452 NHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP---CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVR  524 (567)
T ss_pred             cCccCCCCCCccc-hHHHHHHHHhcC--CCccCC---CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchh
Confidence            4467999999996 677999999875  688884   98654 66889999999999999999999998852        


Q ss_pred             --hHHHHHHHHhhCCCCCccccccccccccc
Q psy17779        109 --KDHLKKHLRTHFPQPRYVSCYPYMYGGYT  137 (141)
Q Consensus       109 --~~~l~~H~~~h~~~~~~~~~~~~~~~~~~  137 (141)
                        .+.|..|...+ |.+++.|  .-|.+.+.
T Consensus       525 d~~s~Lt~HE~~C-G~rt~~C--~~Cgk~Vr  552 (567)
T PLN03086        525 DRLRGMSEHESIC-GSRTAPC--DSCGRSVM  552 (567)
T ss_pred             hhhhhHHHHHHhc-CCcceEc--cccCCeee
Confidence              35789999986 8888876  46666553

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.70  E-value=1.3e-08  Score=45.18  Aligned_cols=25  Identities=52%  Similarity=1.133  Sum_probs=19.1

Q ss_pred             hHHHHHHHhCCCCCeeCccchhccC
Q psy17779         83 ELTRHKRIHSGLRPYPCTHCGKKFG  107 (141)
Q Consensus        83 ~l~~h~~~h~~~~~~~C~~C~~~f~  107 (141)
                      +|..|++.|++++||.|..|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            3667788888888888888887775

...

>PHA02768 hypothetical protein; Provisional

Probab=98.66  E-value=1.5e-08  Score=52.53  Aligned_cols=37  Identities=19%  Similarity=0.430  Sum_probs=18.5

Q ss_pred             ccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHH
Q psy17779         73 NCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDH  111 (141)
Q Consensus        73 ~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~  111 (141)
                      .||+.|...+.|..|++.|+  ++++|..|++.|.+.+.
T Consensus        10 ~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~   46 (55)
T PHA02768         10 ICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGE   46 (55)
T ss_pred             hhCCeeccHHHHHHHHHhcC--CcccCCcccceecccce
Confidence            45555555555555555544  34455555555544433

>PHA02768 hypothetical protein; Provisional

Probab=98.66  E-value=1.5e-08  Score=52.60  Aligned_cols=42  Identities=26%  Similarity=0.581  Sum_probs=35.1

Q ss_pred             cccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhH
Q psy17779         39 FNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEEL   84 (141)
Q Consensus        39 ~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l   84 (141)
                      |.|+.||+.|.....|..|++.|+  +++.|.  .|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~--~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLS--NCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCC--cccceeccccee
Confidence            789999999999999999999988  577786  888888766554

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.48  E-value=2.5e-07  Score=69.40  Aligned_cols=102  Identities=22%  Similarity=0.392  Sum_probs=76.4

Q ss_pred             CchhhHHHHHHHHhhHHHHHhhcCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCC----------
Q psy17779         11 DPYWSNLALEYFKSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTR----------   80 (141)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~----------   80 (141)
                      ..|.|..|++.|... .+..+...-.+++.|+ |+..+ ....|..|+..|...+++.|.  .|+..+..          
T Consensus       452 ~H~~C~~Cgk~f~~s-~LekH~~~~Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~--fC~~~v~~g~~~~d~~d~  526 (567)
T PLN03086        452 NHVHCEKCGQAFQQG-EMEKHMKVFHEPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCR--FCGDMVQAGGSAMDVRDR  526 (567)
T ss_pred             cCccCCCCCCccchH-HHHHHHHhcCCCccCC-CCCCc-chhHHHhhhhccCCCCceeCC--CCCCccccCccccchhhh
Confidence            356788888877533 3333333224789999 99765 568899999999999999998  89988842          


Q ss_pred             hHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhh
Q psy17779         81 NEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH  119 (141)
Q Consensus        81 ~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  119 (141)
                      ...|..|.... +.+++.|..|++.+... ++..|+-..
T Consensus       527 ~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~~  563 (567)
T PLN03086        527 LRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIAV  563 (567)
T ss_pred             hhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHHh
Confidence            34788998875 88999999999877665 567776553

>PHA00616 hypothetical protein

Probab=98.37  E-value=2.6e-07  Score=45.68  Aligned_cols=33  Identities=12%  Similarity=0.345  Sum_probs=26.7

Q ss_pred             ccccCcchhccCChHHHHHHHHHhCCCCCcccc
Q psy17779         38 KFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCD   70 (141)
Q Consensus        38 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   70 (141)
                      ||+|+.||+.|.....|..|++.|++++++.+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            578888888888888888888888888777664

>PHA00616 hypothetical protein

Probab=98.32  E-value=2.9e-07  Score=45.55  Aligned_cols=33  Identities=27%  Similarity=0.512  Sum_probs=26.2

Q ss_pred             CeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         96 PYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      ||.|..||..|...+.|..|++.|++++++-+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            577888888888888888888888888777654

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.21  E-value=1.2e-06  Score=38.83  Aligned_cols=26  Identities=27%  Similarity=0.536  Sum_probs=22.6

Q ss_pred             HHHHHHHhhCCCCCcccccccccccccc
Q psy17779        111 HLKKHLRTHFPQPRYVSCYPYMYGGYTS  138 (141)
Q Consensus       111 ~l~~H~~~h~~~~~~~~~~~~~~~~~~~  138 (141)
                      +|..|+++|++++||.|.  .|.++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~--~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCP--YCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEES--SSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCC--CCcCeeCc
Confidence            478999999999999987  88888864

...

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.92  E-value=7.3e-06  Score=35.03  Aligned_cols=23  Identities=43%  Similarity=1.001  Sum_probs=18.1

Q ss_pred             cccCcchhccCChHHHHHHHHHh
Q psy17779         39 FNCPHCNVAFSNNGQLKGHIRIH   61 (141)
Q Consensus        39 ~~C~~C~~~f~~~~~l~~h~~~h   61 (141)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56888888888888888887753

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00732 hypothetical protein

Probab=97.83  E-value=2e-05  Score=44.44  Aligned_cols=47  Identities=36%  Similarity=0.564  Sum_probs=34.9

Q ss_pred             ccccCcchhccCChHHHHHHHHH-hCCCCCccccCCccCcccCChHhHHHHHHHhC
Q psy17779         38 KFNCPHCNVAFSNNGQLKGHIRI-HTGERPYKCDAENCGKSFTRNEELTRHKRIHS   92 (141)
Q Consensus        38 ~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~   92 (141)
                      ||.|..|++.|.+...|..|++. |.+   +.|+  .|++.|.   .+..|.+.+.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~--~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCP--VCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccC--CCCCEeC---ChhhhhcccC
Confidence            47899999999999999999874 543   4676  8988886   4666765443

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.82  E-value=1.6e-05  Score=33.94  Aligned_cols=23  Identities=52%  Similarity=1.148  Sum_probs=17.3

Q ss_pred             eeCccchhccCChHHHHHHHHhh
Q psy17779         97 YPCTHCGKKFGRKDHLKKHLRTH  119 (141)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~h  119 (141)
                      |.|..|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56777888888888888887764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00732 hypothetical protein

Probab=97.76  E-value=2.8e-05  Score=43.90  Aligned_cols=46  Identities=30%  Similarity=0.608  Sum_probs=37.0

Q ss_pred             CccccCCccCcccCChHhHHHHHHH-hCCCCCeeCccchhccCChHHHHHHHHhh
Q psy17779         66 PYKCDAENCGKSFTRNEELTRHKRI-HSGLRPYPCTHCGKKFGRKDHLKKHLRTH  119 (141)
Q Consensus        66 ~~~c~~~~C~~~~~~~~~l~~h~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  119 (141)
                      ||.|.  .|++.|.....|..|++. |.+   +.|..|++.|.+   +..|..+.
T Consensus         1 py~C~--~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~~---l~~H~~~~   47 (79)
T PHA00732          1 MFKCP--ICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYRR---LNQHFYSQ   47 (79)
T ss_pred             CccCC--CCCCccCCHHHHHHHhhcccCC---CccCCCCCEeCC---hhhhhccc
Confidence            46787  899999999999999984 543   589999999984   67777543

>KOG3993|consensus

Probab=97.75  E-value=8.4e-06  Score=58.69  Aligned_cols=112  Identities=25%  Similarity=0.425  Sum_probs=56.2

Q ss_pred             CCchhhHHHHHHHHhhHHHHHhhcC--CCCccccCcchhccCChHHHHHHHHHhCCCCC-ccccCCccCcccCChHhHHH
Q psy17779         10 LDPYWSNLALEYFKSHEQSMKAKNQ--RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERP-YKCDAENCGKSFTRNEELTR   86 (141)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~-~~c~~~~C~~~~~~~~~l~~   86 (141)
                      ++.+.|-+|++.|..-=.+..+.=.  ...-|+|++|++.|+-..+|..|.+=|....- -.-.-+.-..........+.
T Consensus       265 iGdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~e  344 (500)
T KOG3993|consen  265 IGDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQE  344 (500)
T ss_pred             HHHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhh
Confidence            4556666666666543333222211  11226777777777777777776654321100 00000000000111111111


Q ss_pred             HHHH--hCCCCCeeCccchhccCChHHHHHHHHhhCC
Q psy17779         87 HKRI--HSGLRPYPCTHCGKKFGRKDHLKKHLRTHFP  121 (141)
Q Consensus        87 h~~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  121 (141)
                      -.+.  ...+-.|.|..|++.|.....|+.|+-+|..
T Consensus       345 a~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  345 AERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             ccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhc
Confidence            0110  1223469999999999999999999888763

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.68  E-value=3e-05  Score=34.44  Aligned_cols=26  Identities=38%  Similarity=0.947  Sum_probs=21.8

Q ss_pred             CeeCccchhccCChHHHHHHHHhhCC
Q psy17779         96 PYPCTHCGKKFGRKDHLKKHLRTHFP  121 (141)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~h~~  121 (141)
                      ||.|..|+..|....+|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            57888999999999999999887753

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.68  E-value=4.5e-05  Score=44.72  Aligned_cols=74  Identities=23%  Similarity=0.467  Sum_probs=22.1

Q ss_pred             ccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhh
Q psy17779         40 NCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH  119 (141)
Q Consensus        40 ~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  119 (141)
                      +|..|+..|.+...|..|+...++...-.      ...+.....+..+.+.... ..+.|..|+..|.....|..|++.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~------~~~l~~~~~~~~~~~~~~~-~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPD------QKYLVDPNRLLNYLRKKVK-ESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Ccccccccccccccccccccccccccccc------ccccccccccccccccccC-CCCCCCccCCCCcCHHHHHHHHcCc
Confidence            48899999999999999997655432111      1112223333333332222 2699999999999999999999975


Q ss_pred             C
Q psy17779        120 F  120 (141)
Q Consensus       120 ~  120 (141)
                      .
T Consensus        74 ~   74 (100)
T PF12756_consen   74 H   74 (100)
T ss_dssp             T
T ss_pred             c
Confidence            3

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.61  E-value=0.00021  Score=37.36  Aligned_cols=48  Identities=29%  Similarity=0.546  Sum_probs=27.4

Q ss_pred             cccCcchhccCChHHHHHHHHH-hCCC-CCccccCCccCcccCChHhHHHHHHHh
Q psy17779         39 FNCPHCNVAFSNNGQLKGHIRI-HTGE-RPYKCDAENCGKSFTRNEELTRHKRIH   91 (141)
Q Consensus        39 ~~C~~C~~~f~~~~~l~~h~~~-h~~~-~~~~c~~~~C~~~~~~~~~l~~h~~~h   91 (141)
                      |.|++|++ ..+...|..|... |..+ +.+.|+  +|...+.  .+|..|+..+
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CP--iC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCP--ICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCC--Cchhhhh--hHHHHHHHHh
Confidence            67777777 4455667777654 3332 345665  6765432  3566666544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.55  E-value=7.4e-05  Score=31.87  Aligned_cols=23  Identities=39%  Similarity=1.025  Sum_probs=15.7

Q ss_pred             cccCcchhccCChHHHHHHHHHh
Q psy17779         39 FNCPHCNVAFSNNGQLKGHIRIH   61 (141)
Q Consensus        39 ~~C~~C~~~f~~~~~l~~h~~~h   61 (141)
                      |.|+.|+..|.+...|..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            46777888888888888877665

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.55  E-value=8.7e-05  Score=31.65  Aligned_cols=24  Identities=46%  Similarity=1.050  Sum_probs=16.2

Q ss_pred             eeCccchhccCChHHHHHHHHhhC
Q psy17779         97 YPCTHCGKKFGRKDHLKKHLRTHF  120 (141)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~h~  120 (141)
                      |.|..|+..|.....|..|++.|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            567778888888888887777653

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.44  E-value=7.1e-05  Score=33.20  Aligned_cols=25  Identities=36%  Similarity=0.731  Sum_probs=18.9

Q ss_pred             ccccCcchhccCChHHHHHHHHHhC
Q psy17779         38 KFNCPHCNVAFSNNGQLKGHIRIHT   62 (141)
Q Consensus        38 ~~~C~~C~~~f~~~~~l~~h~~~h~   62 (141)
                      +|.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4678888888888888888876654

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.41  E-value=5.5e-05  Score=52.81  Aligned_cols=53  Identities=32%  Similarity=0.706  Sum_probs=39.5

Q ss_pred             CCccccCCccCcccCChHhHHHHHHHhC-------------------CCCCeeCccchhccCChHHHHHHHH
Q psy17779         65 RPYKCDAENCGKSFTRNEELTRHKRIHS-------------------GLRPYPCTHCGKKFGRKDHLKKHLR  117 (141)
Q Consensus        65 ~~~~c~~~~C~~~~~~~~~l~~h~~~h~-------------------~~~~~~C~~C~~~f~~~~~l~~H~~  117 (141)
                      +||+|+.+.|.+.+.+...|+.|+.-.+                   ..|||.|.+|++.++....|+-|+.
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            6677776677777777777776655322                   2489999999999999999987765

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.26  E-value=0.0012  Score=34.47  Aligned_cols=51  Identities=25%  Similarity=0.537  Sum_probs=38.5

Q ss_pred             CccccCCccCcccCChHhHHHHHHH-hCCC-CCeeCccchhccCChHHHHHHHHhhCC
Q psy17779         66 PYKCDAENCGKSFTRNEELTRHKRI-HSGL-RPYPCTHCGKKFGRKDHLKKHLRTHFP  121 (141)
Q Consensus        66 ~~~c~~~~C~~~~~~~~~l~~h~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~  121 (141)
                      .|.|+  .|++ ..+...|..|... |..+ +.+.|.+|...+.  .+|.+|+..+++
T Consensus         2 ~f~CP--~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCP--YCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCC--CCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            46787  8999 5667789999764 5543 5699999997655  488999988653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.14  E-value=0.00066  Score=34.49  Aligned_cols=35  Identities=20%  Similarity=0.424  Sum_probs=23.0

Q ss_pred             hCCCCCeeCccchhccCChHHHHHHHHhhCCCCCc
Q psy17779         91 HSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRY  125 (141)
Q Consensus        91 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  125 (141)
                      +..+.|-.|.+|+..+.+..+|++|+.+.++.||-
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~~   53 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKPG   53 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS--
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhcccCC
Confidence            34567888888988888888999998888887763

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.92  E-value=0.0012  Score=28.40  Aligned_cols=24  Identities=38%  Similarity=0.910  Sum_probs=16.7

Q ss_pred             cccCcchhccCChHHHHHHHHHhC
Q psy17779         39 FNCPHCNVAFSNNGQLKGHIRIHT   62 (141)
Q Consensus        39 ~~C~~C~~~f~~~~~l~~h~~~h~   62 (141)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            457777777777777777776543

>smart00355 ZnF_C2H2 zinc finger

Probab=96.90  E-value=0.0011  Score=28.50  Aligned_cols=24  Identities=54%  Similarity=1.079  Sum_probs=16.7

Q ss_pred             eeCccchhccCChHHHHHHHHhhC
Q psy17779         97 YPCTHCGKKFGRKDHLKKHLRTHF  120 (141)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~h~  120 (141)
                      +.|..|++.|...+.|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            356777777777777777777553

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.86  E-value=0.0012  Score=33.56  Aligned_cols=31  Identities=19%  Similarity=0.510  Sum_probs=15.2

Q ss_pred             CCCccccCcchhccCChHHHHHHHHHhCCCC
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGER   65 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   65 (141)
                      .+.|..|++|+..+.+..+|++|+...++.+
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            3445566666666666666666665555443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.62  E-value=0.0015  Score=28.21  Aligned_cols=23  Identities=35%  Similarity=0.897  Sum_probs=17.9

Q ss_pred             eeCccchhccCChHHHHHHHHhh
Q psy17779         97 YPCTHCGKKFGRKDHLKKHLRTH  119 (141)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~h  119 (141)
                      |.|..|+..|.....|..|.+.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            56788888888888888887754

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.27  E-value=0.0033  Score=26.84  Aligned_cols=23  Identities=43%  Similarity=0.957  Sum_probs=14.8

Q ss_pred             eeCccchhccCChHHHHHHHHhhC
Q psy17779         97 YPCTHCGKKFGRKDHLKKHLRTHF  120 (141)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~h~  120 (141)
                      |.|..|+.... ...|..|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56777777776 777777777654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.20  E-value=0.0028  Score=27.29  Aligned_cols=22  Identities=41%  Similarity=0.877  Sum_probs=14.7

Q ss_pred             cccCcchhccCChHHHHHHHHH
Q psy17779         39 FNCPHCNVAFSNNGQLKGHIRI   60 (141)
Q Consensus        39 ~~C~~C~~~f~~~~~l~~h~~~   60 (141)
                      |.|..|+..|.+...+..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566777777777777777653

>KOG3993|consensus

Probab=96.11  E-value=0.0027  Score=46.27  Aligned_cols=85  Identities=16%  Similarity=0.277  Sum_probs=55.1

Q ss_pred             CCccccCcchhccCChHHHHHHHHHhCCCCC--------c---------ccc---------------------------C
Q psy17779         36 PKKFNCPHCNVAFSNNGQLKGHIRIHTGERP--------Y---------KCD---------------------------A   71 (141)
Q Consensus        36 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~--------~---------~c~---------------------------~   71 (141)
                      ...|.|.+|++.|.....|+.|+.+|.....        +         .+.                           .
T Consensus       354 ~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sael~~p  433 (500)
T KOG3993|consen  354 SGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSAELELP  433 (500)
T ss_pred             CceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeeccccccCC
Confidence            3469999999999999999999876643100        0         000                           0


Q ss_pred             CccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhC
Q psy17779         72 ENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHF  120 (141)
Q Consensus        72 ~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  120 (141)
                      +.++..+.++..-..+.+....+..|.|+.|...|.....|.+|+...|
T Consensus       434 p~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~H  482 (500)
T KOG3993|consen  434 PYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCH  482 (500)
T ss_pred             CCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcC
Confidence            1333333333333333333444556889999999999999999988743

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.94  E-value=0.0059  Score=26.03  Aligned_cols=23  Identities=39%  Similarity=0.960  Sum_probs=13.6

Q ss_pred             cccCcchhccCChHHHHHHHHHhC
Q psy17779         39 FNCPHCNVAFSNNGQLKGHIRIHT   62 (141)
Q Consensus        39 ~~C~~C~~~f~~~~~l~~h~~~h~   62 (141)
                      |.|+.|+.... ...|..|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45777776666 667777776543

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=95.83  E-value=0.0031  Score=44.34  Aligned_cols=52  Identities=33%  Similarity=0.800  Sum_probs=43.0

Q ss_pred             CCccccCc--chhccCChHHHHHHHHH-h------C------------CCCCccccCCccCcccCChHhHHHHHH
Q psy17779         36 PKKFNCPH--CNVAFSNNGQLKGHIRI-H------T------------GERPYKCDAENCGKSFTRNEELTRHKR   89 (141)
Q Consensus        36 ~~~~~C~~--C~~~f~~~~~l~~h~~~-h------~------------~~~~~~c~~~~C~~~~~~~~~l~~h~~   89 (141)
                      ++||+|++  |.+.+.....|+-|+.. |      .            ..+||.|.  .|++.+.+...|+.|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCe--vC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCE--VCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceecc--ccchhhccCccceeccc
Confidence            59999998  99999999999999752 2      1            12789998  89999999999988854

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.68  E-value=0.0035  Score=27.67  Aligned_cols=22  Identities=32%  Similarity=0.892  Sum_probs=16.7

Q ss_pred             eeCccchhccCChHHHHHHHHh
Q psy17779         97 YPCTHCGKKFGRKDHLKKHLRT  118 (141)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~  118 (141)
                      |.|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5677888888888887777664

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=94.71  E-value=0.026  Score=36.25  Aligned_cols=35  Identities=20%  Similarity=0.371  Sum_probs=21.1

Q ss_pred             CeeCccchhccCChHHHHHHHHhhCCCCCcccccccccccc
Q psy17779         96 PYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGY  136 (141)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~  136 (141)
                      +|.|. |+.   ....+..|.++|.++++|.|.  .|.+.|
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~--~C~~~l  153 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCR--RCGETL  153 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECC--CCCcee
Confidence            46665 664   444556667777666666665  455444

>PRK04860 hypothetical protein; Provisional

Probab=94.51  E-value=0.031  Score=35.93  Aligned_cols=38  Identities=34%  Similarity=0.855  Sum_probs=31.2

Q ss_pred             CccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCCh
Q psy17779         66 PYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRK  109 (141)
Q Consensus        66 ~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~  109 (141)
                      +|.|   .|+.   ....+..|.++|.++++|.|..|+..|...
T Consensus       119 ~Y~C---~C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRC---KCQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEc---CCCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            5778   3765   556788999999999999999999887654

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.88  E-value=0.058  Score=23.30  Aligned_cols=20  Identities=50%  Similarity=1.110  Sum_probs=11.5

Q ss_pred             eCccchhccCChHHHHHHHHh
Q psy17779         98 PCTHCGKKFGRKDHLKKHLRT  118 (141)
Q Consensus        98 ~C~~C~~~f~~~~~l~~H~~~  118 (141)
                      .|..|++.| ....|..|+.+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHHh
Confidence            566666666 44455566543

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.20  E-value=0.085  Score=24.44  Aligned_cols=23  Identities=22%  Similarity=0.543  Sum_probs=18.6

Q ss_pred             CeeCccchhccCChHHHHHHHHh
Q psy17779         96 PYPCTHCGKKFGRKDHLKKHLRT  118 (141)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~  118 (141)
                      +|.|..|+..|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            47888888888888888888765

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=91.54  E-value=0.24  Score=28.55  Aligned_cols=72  Identities=21%  Similarity=0.416  Sum_probs=18.0

Q ss_pred             hHHHHHHHHhhHHHHHhhcCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHh
Q psy17779         15 SNLALEYFKSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH   91 (141)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h   91 (141)
                      |.+|...|.+...+..++...-. +..+. ...+.....+..+.... ....+.|.  .|+..|.+...|..|++.+
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~-~~~~~-~~~l~~~~~~~~~~~~~-~~~~~~C~--~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHG-FDIPD-QKYLVDPNRLLNYLRKK-VKESFRCP--YCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             --------------------------------------------------SSEEBS--SSS-EESSHHHHHHHHHHT
T ss_pred             ccccccccccccccccccccccc-ccccc-ccccccccccccccccc-cCCCCCCC--ccCCCCcCHHHHHHHHcCc
Confidence            56677777766666555532211 11111 11111222222222211 11256776  7888888888888888754

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=87.98  E-value=0.19  Score=36.69  Aligned_cols=60  Identities=40%  Similarity=0.680  Sum_probs=41.7

Q ss_pred             ccCcccCChHhHHHHHH--HhCCC--CCeeCc--cchhccCChHHHHHHHHhhCCCCCcccccccc
Q psy17779         73 NCGKSFTRNEELTRHKR--IHSGL--RPYPCT--HCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYM  132 (141)
Q Consensus        73 ~C~~~~~~~~~l~~h~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~  132 (141)
                      .|...|.....+..|.+  .|.++  +++.|.  .|+..|.+...+..|...|.+.++.......+
T Consensus       294 ~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (467)
T COG5048         294 QCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNS  359 (467)
T ss_pred             cccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccC
Confidence            56667777777777777  67777  777777  57777777777777777777666655544333

>KOG1146|consensus

Probab=86.48  E-value=0.18  Score=42.15  Aligned_cols=77  Identities=18%  Similarity=0.368  Sum_probs=46.4

Q ss_pred             cccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhC-----------------CCCCeeCcc
Q psy17779         39 FNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHS-----------------GLRPYPCTH  101 (141)
Q Consensus        39 ~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~-----------------~~~~~~C~~  101 (141)
                      +.|..|.+.+...-.+. |+   ....+|.|.  .|...|.....+..|.+.-.                 .-.+| |..
T Consensus      1261 ~~c~~~~~~~~~~~~~~-~l---~~~~~~~~~--~~~~~~~~~~~l~~~~~k~~~~~~~~~~~~~~~l~~~d~~~~-c~~ 1333 (1406)
T KOG1146|consen 1261 GECGAVDELLTPSFGIS-TL---DVTHRYLCR--QCKMAFDGEAPLTAHQRKFCFAGRGSGGSMPPPLRVPDCTYH-CLA 1333 (1406)
T ss_pred             chhhhccccccCcccee-ec---ccchhHHHH--HHHhhhcchhHHHHHHHHHHhccCccccCCCCcccCcccccc-chH
Confidence            45666666655544433 32   222345554  56666666666666653221                 12345 999


Q ss_pred             chhccCChHHHHHHHHhhCCC
Q psy17779        102 CGKKFGRKDHLKKHLRTHFPQ  122 (141)
Q Consensus       102 C~~~f~~~~~l~~H~~~h~~~  122 (141)
                      |...|+...+|..|+++-.++
T Consensus      1334 c~~~~~~~~alqihm~~~~~~ 1354 (1406)
T KOG1146|consen 1334 CEVLLSGREALQIHMRSSAHR 1354 (1406)
T ss_pred             HHhhcchhHHHHHHHHHhhhc
Confidence            999999999999998874433

>KOG4173|consensus

Probab=85.11  E-value=0.38  Score=32.08  Aligned_cols=78  Identities=24%  Similarity=0.484  Sum_probs=43.7

Q ss_pred             CCccccCc--chhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhC----------CCCCeeCcc--
Q psy17779         36 PKKFNCPH--CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHS----------GLRPYPCTH--  101 (141)
Q Consensus        36 ~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~----------~~~~~~C~~--  101 (141)
                      ...+.|+.  |...|........|..+.++.   .|.  .|.+.|.+.--|..|+.-++          |.-.|.|-+  
T Consensus        77 ~~~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs--~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEg  151 (253)
T KOG4173|consen   77 VPAFACQVAGCCQVFDALDDYEHHYHTLHGN---SCS--FCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEG  151 (253)
T ss_pred             cccccccccchHHHHhhhhhHHHhhhhcccc---hhH--HHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHh
Confidence            34456665  556666666555555433322   354  67777776666666654322          222366644  


Q ss_pred             chhccCChHHHHHHHHh
Q psy17779        102 CGKKFGRKDHLKKHLRT  118 (141)
Q Consensus       102 C~~~f~~~~~l~~H~~~  118 (141)
                      |+..|.+..+-..|+-.
T Consensus       152 Ct~KFkT~r~RkdH~I~  168 (253)
T KOG4173|consen  152 CTEKFKTSRDRKDHMIR  168 (253)
T ss_pred             hhhhhhhhhhhhhHHHH
Confidence            66667777666666654

>KOG2231|consensus

Probab=84.67  E-value=2.8  Score=33.18  Aligned_cols=65  Identities=25%  Similarity=0.500  Sum_probs=40.1

Q ss_pred             ChHHHHHHHHHhCC-CC----CccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc------hhccCChHHHHHHHHh
Q psy17779         50 NNGQLKGHIRIHTG-ER----PYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC------GKKFGRKDHLKKHLRT  118 (141)
Q Consensus        50 ~~~~l~~h~~~h~~-~~----~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C------~~~f~~~~~l~~H~~~  118 (141)
                      +...|..|+..-.. ++    ...|.  .|...|.....+..|++.++    +.|..|      +..|....+|..|.+.
T Consensus       161 t~~el~~h~~~gd~d~~s~rGhp~C~--~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~  234 (669)
T KOG2231|consen  161 TRAELNLHLMFGDPDDESCRGHPLCK--FCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRK  234 (669)
T ss_pred             hHHHHHHHHhcCCCccccccCCccch--hhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhh
Confidence            34456666653211 11    12454  78888888888888887543    445555      3456777788888776


Q ss_pred             hC
Q psy17779        119 HF  120 (141)
Q Consensus       119 h~  120 (141)
                      +|
T Consensus       235 ~H  236 (669)
T KOG2231|consen  235 GH  236 (669)
T ss_pred             cC
Confidence            54

>KOG4173|consensus

Probab=82.22  E-value=0.92  Score=30.35  Aligned_cols=55  Identities=25%  Similarity=0.497  Sum_probs=38.3

Q ss_pred             cccCcchhccCChHHHHHHHHH----------hCCCCCccccCCccCcccCChHhHHHHHHHhCC
Q psy17779         39 FNCPHCNVAFSNNGQLKGHIRI----------HTGERPYKCDAENCGKSFTRNEELTRHKRIHSG   93 (141)
Q Consensus        39 ~~C~~C~~~f~~~~~l~~h~~~----------h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~   93 (141)
                      ..|..|.+.|++...|..|+..          ..|...|.|-...|+..|.....-..|+-..+.
T Consensus       107 ~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  107 NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHHhcc
Confidence            3688888888888888777642          234445777767788888777777777665543

>KOG2893|consensus

Probab=81.05  E-value=0.65  Score=31.77  Aligned_cols=42  Identities=29%  Similarity=0.546  Sum_probs=23.8

Q ss_pred             ccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHH
Q psy17779         40 NCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRH   87 (141)
Q Consensus        40 ~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h   87 (141)
                      .|.+|.+.|...--|.+|++.    +.|+|-  +|-+.+.+...|..|
T Consensus        12 wcwycnrefddekiliqhqka----khfkch--ichkkl~sgpglsih   53 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA----KHFKCH--ICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeeecccccchhhhhhhhhhh----ccceee--eehhhhccCCCceee
Confidence            466666666666666666543    345565  566555444445544

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=80.05  E-value=1.1  Score=23.37  Aligned_cols=26  Identities=27%  Similarity=0.639  Sum_probs=14.2

Q ss_pred             CCCCeeCccchhccCChHHHHHHHHh
Q psy17779         93 GLRPYPCTHCGKKFGRKDHLKKHLRT  118 (141)
Q Consensus        93 ~~~~~~C~~C~~~f~~~~~l~~H~~~  118 (141)
                      ||.-+.|..|+..|...-++.+|...
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhH
Confidence            34445555566556555555555544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	141
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		4e-20
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-18
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-18
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-18
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		6e-18
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		4e-17
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		9e-16
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-15
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		2e-15
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		3e-15
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-15
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		3e-15
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-14
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-14
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		2e-13
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		3e-12
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-11
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-11
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		1e-10
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		5e-10
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		5e-10
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		1e-09
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-09
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		2e-09
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		2e-09
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		2e-09
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		6e-09
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-08
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		2e-08
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		7e-08
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		1e-07
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		1e-06
4gzn_C	60	Mouse Zfp57 Zinc Fingers In Complex With Methylated		2e-06
1un6_B	87	The Crystal Structure Of A Zinc Finger - Rna Comple		3e-06
2j7j_A	85	Invariance Of The Zinc Finger Module: A Comparison		3e-06
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		4e-06
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		3e-05
2ent_A	48	Solution Structure Of The Second C2h2-Type Zinc Fin		6e-05
2eoe_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		7e-05
2yu8_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2ytr_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2ytk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
1sp2_A	31	Nmr Structure Of A Zinc Finger Domain From Transcri		3e-04
2enf_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2eme_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2yti_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2el5_A	42	Solution Structure Of The 18th Zf-C2h2 Domain From		4e-04
2em1_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2en1_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2dlk_A	79	Solution Structure Of The First And The Second Zf-C		7e-04
2ytd_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-04

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 93.2 bits (230), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
           K + CP C  +FS +  L+ H R HTGE+PYKC    CGKSF+++ +L +H+R H+G +P
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCP--ECGKSFSQSSDLQKHQRTHTGEKP 60
Query: 97  YPCTHCGKKFGRKDHLKKHLRTH 119
           Y C  CGK F R DHL +H RTH
Sbjct: 61  YKCPECGKSFSRSDHLSRHQRTH 83

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
           K + CP C  +FS    L+ H R HTGE+PYKC    CGKSF+R + L  H+R H+G +P
Sbjct: 104 KPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP--ECGKSFSREDNLHTHQRTHTGEKP 161
Query: 97  YPCTHCGKKFGRKDHLKKHLRTH 119
           Y C  CGK F R+D L  H RTH
Sbjct: 162 YKCPECGKSFSRRDALNVHQRTH 184

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 44  CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCG 103
           C   ++ +  LK H+R HTGE+PY CD + CG  F R++ELTRH R H+G RP+ C  C 
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 73
Query: 104 KKFGRKDHLKKHLRTHF 120
           + F R DHL  H++ HF
Sbjct: 74  RAFSRSDHLALHMKRHF 90

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 44  CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCG 103
           C   ++ +  LK H+R HTGE+PY CD + CG  F R++ELTRH R H+G RP+ C  C 
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 72
Query: 104 KKFGRKDHLKKHLRTHF 120
           + F R DHL  H++ HF
Sbjct: 73  RAFSRSDHLALHMKRHF 89

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 86.3 bits (212), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 58/89 (65%)
Query: 31  AKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRI 90
           A  +RP     P CN  +     L+ H R HTGE+PY+CD ++C + F+R+++L RH+R 
Sbjct: 1   ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR 60
Query: 91  HSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
           H+G++P+ C  C +KF R DHLK H RTH
Sbjct: 61  HTGVKPFQCKTCQRKFSRSDHLKTHTRTH 89

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 49/78 (62%)
Query: 42  PHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
           P C   ++ +  LK H+R HTGE+PYKC  E C   F R++ELTRH R H+G +P+ C  
Sbjct: 21  PGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGV 80
Query: 102 CGKKFGRKDHLKKHLRTH 119
           C + F R DHL  H++ H
Sbjct: 81  CNRSFSRSDHLALHMKRH 98

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 6/91 (6%)
Query: 34  QRPKKFNCP--HCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH 91
           +RP  + CP   C+  FS +G L  HIRIHTG++P++C    C ++F+R++ LT H R H
Sbjct: 2   ERP--YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTH 57
Query: 92  SGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQ 122
           +G +P+ C  CG+KF R D  K+H + H  Q
Sbjct: 58  TGEKPFACDICGRKFARSDERKRHTKIHLRQ 88

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 6/91 (6%)
Query: 34  QRPKKFNCP--HCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH 91
           +RP  + CP   C+  FS + +L  HIRIHTG++P++C    C ++F+R++ LT H R H
Sbjct: 2   ERP--YACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTH 57
Query: 92  SGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQ 122
           +G +P+ C  CG+KF R D  K+H + H  Q
Sbjct: 58  TGEKPFACDICGRKFARSDERKRHTKIHLRQ 88

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 6/91 (6%)
Query: 34  QRPKKFNCP--HCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH 91
           +RP  + CP   C+  FS++  L  HIRIHTG++P++C    C ++F+R++ LT H R H
Sbjct: 2   ERP--YACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTH 57
Query: 92  SGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQ 122
           +G +P+ C  CG+KF R D  K+H + H  Q
Sbjct: 58  TGEKPFACDICGRKFARSDERKRHTKIHLRQ 88

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 6/91 (6%)
Query: 34  QRPKKFNCP--HCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH 91
           +RP  + CP   C+  FS + +L  HIRIHTG++P++C    C ++F+R++ LT H R H
Sbjct: 2   ERP--YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTH 57
Query: 92  SGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQ 122
           +G +P+ C  CG+KF R D  K+H + H  Q
Sbjct: 58  TGEKPFACDICGRKFARSDERKRHTKIHLRQ 88

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 6/91 (6%)
Query: 34  QRPKKFNCP--HCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH 91
           +RP  + CP   C+  FS +  L  HIRIHTG++P++C    C ++F+R++ LT H R H
Sbjct: 2   ERP--YACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTH 57
Query: 92  SGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQ 122
           +G +P+ C  CG+KF R D  K+H + H  Q
Sbjct: 58  TGEKPFACDICGRKFARSDERKRHTKIHLRQ 88

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 6/91 (6%)
Query: 34  QRPKKFNCP--HCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH 91
           +RP  + CP   C+  FS + +L  HIRIHTG++P++C    C ++F+R++ LT H R H
Sbjct: 1   ERP--YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTH 56
Query: 92  SGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQ 122
           +G +P+ C  CG+KF R D  K+H + H  Q
Sbjct: 57  TGEKPFACDICGRKFARSDERKRHTKIHLRQ 87

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 58/90 (64%), Gaps = 6/90 (6%)
Query: 33  NQRPKKFNCP--HCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRI 90
           ++RP  + CP   C+  FS + +L  HIRIHTG++P++C    C ++F+R++ LT H R 
Sbjct: 1   HERP--YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRT 56
Query: 91  HSGLRPYPCTHCGKKFGRKDHLKKHLRTHF 120
           H+G +P+ C  CG+KF R D  K+H + H 
Sbjct: 57  HTGEKPFACDICGRKFARSDERKRHTKIHL 86

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 36  PKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLR 95
           P+   C  C  AF  + +LK H  +HTGE+P++C  E CGK F+ +  L  H RIH+G R
Sbjct: 32  PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 91
Query: 96  PYPC--THCGKKFGRKDHLKKHLRTH 119
           PY C    C KKF +  +LK H+ TH
Sbjct: 92  PYVCPFDGCNKKFAQSTNLKSHILTH 117

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 65  RPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
           RPY C  E+C + F+R++ELTRH RIH+G +P+ C  C + F R DHL  H+RTH
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 40  NCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC 99
            CP    +F    +L  HIR+HTGE+P+ C    CGK F R+E L  HKR H+G +P+ C
Sbjct: 64  ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKC 123
Query: 100 TH--CGKKFGRKDHLKKHLRTH 119
               C ++F      KKH+  H
Sbjct: 124 EFEGCDRRFANSSDRKKHMHVH 145

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 34  QRPKKFNCP--HCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH 91
           +RP  + CP   C+  FS    L  HIRIHTG++P++C    C ++F++   L  H R H
Sbjct: 2   ERP--YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRI--CMRNFSQQASLNAHIRTH 57
Query: 92  SGLRPYPCTHCGKKFG----RKDHLKKHLR 117
           +G +P+ C  CG+KF     R  H K HLR
Sbjct: 58  TGEKPFACDICGRKFATLHTRTRHTKIHLR 87

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 10/90 (11%)
Query: 34  QRPKKFNCP--HCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH 91
           +RP  + CP   C+  FS    L  HIRIHTG++P++C    C ++F+++  L +H R H
Sbjct: 2   ERP--YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRI--CMRNFSQHTGLNQHIRTH 57
Query: 92  SGLRPYPCTHCGKKFG----RKDHLKKHLR 117
           +G +P+ C  CG+KF     R  H K HLR
Sbjct: 58  TGEKPFACDICGRKFATLHTRDRHTKIHLR 87

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 39  FNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYP 98
           F+C  C  +F  +  L  H+ IH+  RPY C  + CGK F +  ++ +H  IH+G +P+ 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPC--QYCGKRFHQKSDMKKHTFIHTGEKPHK 59
Query: 99  CTHCGKKFGRKDHLKKHLRTH 119
           C  CGK F +  +L  H R H
Sbjct: 60  CQVCGKAFSQSSNLITHSRKH 80

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 48  FSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH--CGKK 105
           F     L  H+R HTGE+P+KC  E C KS++R E L  H R H+G +PY C H  C K 
Sbjct: 49  FKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKA 108
Query: 106 FGRKDHLKKHL-RTHFPQPRYVSCYPYMYGGYTS 138
           F       KH  RTH  +  YV   P     YT 
Sbjct: 109 FSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTD 142

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
           K+F C  C   F+ +  L  H R HT ERPY CD   C K+F R + L  H+ IHS  +P
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKP 73
Query: 97  YPCTHCGKKFGRKDHLKKHLRTHF 120
           + C  CGK F +   L  H   H 
Sbjct: 74  FKCQECGKGFCQSRTLAVHKTLHM 97

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 44  CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH-- 101
           C  A++ N +L+ H+  HTGE+P+ C  E C K FT    LTRH   H+G + + C    
Sbjct: 11  CGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG 70
Query: 102 CGKKFGRKDHLKKHL 116
           C  +F  K ++KKH 
Sbjct: 71  CDLRFTTKANMKKHF 85

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 44  CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCG 103
           C  +F++  Q   H+ +H G RPY C    CGK F     L  H +IH+G++PY C  C 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECNICA 72
Query: 104 KKFGRKDHLKKHLRT 118
           K+F  +D   +H+ +
Sbjct: 73  KRFMWRDSFHRHVTS 87

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 37  KKFNCPH--CNVAFSNNGQLKGHI-RIHTGER-PYKCDAENCGKSFTRNEELTRHKRIHS 92
           K F C    C++ F+    +K H  R H  +   Y C  ENCGK+F ++ +L  H+  H+
Sbjct: 71  KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT 130
Query: 93  GLRPYPCTH--CGKKFGRKDHLKKHLRTHFPQP 123
              PY C H  C K+F     LK+H + H   P
Sbjct: 131 QQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 163

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 65  RPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
           R YKCD   CGKSF+ + +L++H+R H+G +PY C  CGK F ++ HL  H R H
Sbjct: 17  RRYKCD--ECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 64  ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQP 123
           E+PY C    CGK+F+R+  L +H+R+H+G +PY C  CGK F +   L  H R H   P
Sbjct: 12  EKPYGCV--ECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP 69

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 41  CPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
           C  C   FS   +LK H+R HTG +PYKC  + C  +   +  L +H RIHS  RP+ C 
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKC--KTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 101 HCGKKFGRKDHLKKHLRTH 119
            C         L  HLR+H
Sbjct: 69  ICPYASRNSSQLTVHLRSH 87

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 41  CPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGL--RPYP 98
           C  C   F +   L  H   H+GE+PY C    CG  F R + ++ H R H G   +PY 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 99  CTHCGKKFGRKDHLKKHLRTHFPQP 123
           C  CGK F R DHL  H++     P
Sbjct: 68  CQSCGKGFSRPDHLNGHIKQVHSGP 92

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
          K + C  C  +F   G L  H  +HTGE+PY+C+   CG  F R   L  H RIHSG +P
Sbjct: 16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKP 73

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 42 PHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH 91
          P C   +  +  LK H R HTGE+P+ C  + C + F R++EL+RH+R H
Sbjct: 23 PGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGL 94
          K F C  C   FS +  L  HIR HTGE+P+ CD   CG+ F R++E  RH+ I   L
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHRDIQHIL 57

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 29/107 (27%)
Query: 39  FNCPHCNVAFSNNGQLKGHIRIHTGERPYKC----------------DAENC-------- 74
             CP C+  F +   LK H R HTGE+P++C                +A NC        
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67
Query: 75  -----GKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHL 116
                 ++F R  EL  H   H+G  PY C+ C ++F +K  L+ H+
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHM 114

>pdb|4GZN|C Chain C, Mouse Zfp57 Zinc Fingers In Complex With Methylated Dna Length = 60

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 63  GERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQ 122
            ERP+ C+   CGK++     L+RH+R H G RP  C  CGK F  +  + +HL+ H  +
Sbjct: 1   SERPFFCNF--CGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK 58
Query: 123 P 123
           P
Sbjct: 59  P 59

>pdb|1UN6|B Chain B, The Crystal Structure Of A Zinc Finger - Rna Complex Reveals Two Modes Of Molecular Recognition Length = 87

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 44 CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC 99
          C  AF  + QLK H   HT + PY+C  E C K F+    L RH+++H+G   YPC
Sbjct: 9  CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPC 61

>pdb|2J7J|A Chain A, Invariance Of The Zinc Finger Module: A Comparison Of The Free Structure With Those In Nucleic-Acid Complexes Length = 85

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 44 CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC 99
          C  AF  + QLK H   HT + PY+C  E C K F+    L RH+++H+G   YPC
Sbjct: 9  CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPC 61

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 39 FNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRH-KRIHSG 93
          F C  C  AF+    LK H R HT E+PY C    C ++FTR + L RH ++IHSG
Sbjct: 3  FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSG 56

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 39  FNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYP 98
           + C  C  ++     L+ H  IH+ E+ Y C    C K F   E  T+H+  H+G R Y 
Sbjct: 23  YICIVCKRSYVCLTSLRRHFNIHSWEKKYPC--RYCEKVFPLAEYRTKHEIHHTGERRYQ 80
Query: 99  CTHCGKKFGRKDHLKKHLRTHFPQ 122
           C  CGK F     +  H+++   Q
Sbjct: 81  CLACGKSFINYQFMSSHIKSVHSQ 104

>pdb|2ENT|A Chain A, Solution Structure Of The Second C2h2-Type Zinc Finger Domain From Human Krueppel-Like Factor 15 Length = 48

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
          E+P+ C    CG  F+R++EL+RH+R HSG++P
Sbjct: 10 EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP 42

>pdb|2EOE|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 508- 540) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
          E+PYKC+   CGK FT+N  L  H+RIH+G++P
Sbjct: 10 EKPYKCN--ECGKVFTQNSHLANHQRIHTGVKP 40

>pdb|2YU8|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 648- 680) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
          E+PYKC+   CGK FT+N  L RH+R+H+G +P
Sbjct: 10 EKPYKCN--ECGKVFTQNSHLARHRRVHTGGKP 40

>pdb|2YTR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 760- 792) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 17/33 (51%), Positives = 26/33 (78%), Gaps = 2/33 (6%)
Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
          E+PYKC+   CGK+F++  +L RH+RIH+G +P
Sbjct: 10 EKPYKCN--ECGKAFSQTSKLARHQRIHTGEKP 40

>pdb|2YTK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 396- 428) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
          E+PYKC+   CGK FT+N  LT H RIH+G +P
Sbjct: 10 EKPYKCNE--CGKVFTQNSHLTNHWRIHTGEKP 40

>pdb|1SP2|A Chain A, Nmr Structure Of A Zinc Finger Domain From Transcription Factor Sp1f2, Minimized Average Structure Length = 31

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHSG 93
          RP+ C    CGK FTR++EL RHKR H+G
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTG 29

>pdb|2ENF|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 340- 372) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
          E+PYKC+   CGK FT+N  L RH+ IH+G +P
Sbjct: 10 EKPYKCN--ECGKVFTQNSHLVRHRGIHTGEKP 40

>pdb|2EME|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 725- 757) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
          E+PY CD   CGK+F  + EL RH+RIH+G +P
Sbjct: 10 EKPYVCD--YCGKAFGLSAELVRHQRIHTGEKP 40

>pdb|2YTI|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 564- 596) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
          E+PYKC+   CGK FT+N  L RH+ IH+G +P
Sbjct: 10 EKPYKCN--ECGKVFTQNSHLARHRGIHTGEKP 40

>pdb|2EL5|A Chain A, Solution Structure Of The 18th Zf-C2h2 Domain From Human Zinc Finger Protein 268 Length = 42

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 18/28 (64%)
Query: 92  SGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
           SG  PY C+ CGK F RKD L  H RTH
Sbjct: 6   SGENPYECSECGKAFNRKDQLISHQRTH 33

>pdb|2EM1|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 637- 667) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Query: 62 TGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
          +GE+PY C+   CGK+FT   +L  HK +H+G++P
Sbjct: 6  SGEKPYSCN--ECGKAFTFKSQLIVHKGVHTGVKP 38

>pdb|2EN1|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 563- 595) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/33 (51%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
          E+P+KC  E CGK FT+N +L  H+R+H+G +P
Sbjct: 10 EKPFKC--EECGKRFTQNSQLHSHQRVHTGEKP 40

>pdb|2DLK|A Chain A, Solution Structure Of The First And The Second Zf-C2h2 Domains Of Zinc Finger Protein 692 Length = 79

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 62  TGERPYKCDAENCGKSFTRNEELTRHKR---IHSGLRPYPCTHCGKKFGRKDHLKKHLRT 118
           +G     CD   CG+ F+  + L  HK+   IH      P   CGK F  K HLK+H++ 
Sbjct: 3   SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKL 62
Query: 119 HFPQPRYV 126
           H     Y+
Sbjct: 63  HSDTRDYI 70

>pdb|2YTD|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 426- 458) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
          E+PYKC    CGK+F R+  L  H+RIH+G RP
Sbjct: 10 EKPYKCS--ECGKAFHRHTHLNEHRRIHTGYRP 40

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	141
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-40
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-39
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-20
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-34
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-29
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-22
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-32
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	6e-24
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-19
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-04
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-32
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-26
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-20
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	9e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-31
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	9e-27
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	8e-21
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-19
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-12
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-30
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-23
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	9e-21
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-30
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-26
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-20
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	9e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	8e-30
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-14
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	8e-30
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-26
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-25
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-25
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-29
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-17
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-29
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-29
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-29
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-27
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-17
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-29
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-26
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-25
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-16
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-13
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-29
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-07
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-29
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-24
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-28
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-18
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-09
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-28
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-27
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-20
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-27
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-17
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-26
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-25
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-23
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-26
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-24
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-26
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-14
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	9e-26
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-19
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-25
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-20
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-25
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-19
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-24
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-23
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-23
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-17
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-22
2epa_A	72	Krueppel-like factor 10; transforming growth facto	6e-19
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-21
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-16
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-20
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-09
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	9e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-20
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-17
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-16
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-10
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-07
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-16
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-09
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-16
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-16
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-16
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-07
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-16
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-11
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-07
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-16
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-16
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-16
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-09
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-16
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-16
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	5e-16
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	6e-09
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-16
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-09
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-16
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-16
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-16
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-07
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-16
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-16
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-16
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-09
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	7e-16
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	7e-08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-16
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-09
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-16
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-09
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-16
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-09
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-16
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-16
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-07
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-16
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-16
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-10
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-16
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-15
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-15
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-07
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-15
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-09
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-15
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-09
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-15
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-15
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-07
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-15
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-15
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-15
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-09
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-15
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-15
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-15
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-09
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-08
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-15
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-15
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-09
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-15
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-15
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-15
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-15
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-15
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-15
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-09
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-15
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-15
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-09
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-15
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-15
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-15
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-15
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-09
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-15
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-09
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-15
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-15
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-15
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-15
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-08
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-14
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-14
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-14
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-14
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	9e-08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-07
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-14
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-10
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-14
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-09
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-14
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-09
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-14
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-14
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-09
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-14
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	3e-14
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	5e-09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-14
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-09
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-14
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-14
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-09
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-14
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	7e-14
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-07
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-14
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	9e-14
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-09
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	5e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-13
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	7e-08
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	4e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-13
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-13
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-13
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-13
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-08
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	7e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-13
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-09
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-13
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-13
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	6e-08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	5e-07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-13
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-13
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-13
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-12
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	8e-12
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	6e-06
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	6e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-11
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-10
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-11
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	8e-07
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	2e-11
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	5e-09
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-11
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-08
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	5e-11
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	3e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-11
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-10
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-10
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	8e-07
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	8e-05
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	9e-08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	5e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	1e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	3e-07
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	4e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	9e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	4e-06
1ard_A	29	Yeast transcription factor ADR1; transcription reg	6e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	2e-05
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	2e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	6e-05
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	7e-05
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	7e-04
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	4e-04
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	4e-04
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	5e-04
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic} Len	6e-04
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	7e-04
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	7e-04
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	9e-04

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score =  129 bits (327), Expect = 2e-40
 Identities = 38/89 (42%), Positives = 52/89 (58%)

Query: 32  KNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH 91
           K       +   C   ++ +  LK H+R HTGE+PY CD + CG  F R++ELTRH R H
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 92  SGLRPYPCTHCGKKFGRKDHLKKHLRTHF 120
           +G RP+ C  C + F R DHL  H++ HF
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHMKRHF 89

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score =  125 bits (317), Expect = 6e-39
 Identities = 37/88 (42%), Positives = 53/88 (60%)

Query: 32  KNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH 91
           + +R    + P C   ++ +  LK H+R HTGE+PYKC  E C   F R++ELTRH R H
Sbjct: 11  EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH 70

Query: 92  SGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
           +G +P+ C  C + F R DHL  H++ H
Sbjct: 71  TGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 79.6 bits (197), Expect = 1e-20
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 8/75 (10%)

Query: 47  AFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH--CGK 104
           +  ++G      RIH  + P       C K +T++  L  H R H+G +PY CT   C  
Sbjct: 2   SSGSSGPDLEKRRIHYCDYPG------CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDW 55

Query: 105 KFGRKDHLKKHLRTH 119
           +F R D L +H R H
Sbjct: 56  RFARSDELTRHYRKH 70

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  114 bits (287), Expect = 5e-34
 Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 2/85 (2%)

Query: 37  KKFNC--PHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGL 94
           + F C  P CN  +     L+ H R HTGE+PY+CD ++C + F+R+++L RH+R H+G+
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64

Query: 95  RPYPCTHCGKKFGRKDHLKKHLRTH 119
           +P+ C  C +KF R DHLK H RTH
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTRTH 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  102 bits (256), Expect = 3e-29
 Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 4/87 (4%)

Query: 35  RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGL 94
           +P + +   C   FS + QLK H R HTG +P++C  + C + F+R++ L  H R H+G 
Sbjct: 35  KPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQC--KTCQRKFSRSDHLKTHTRTHTGE 92

Query: 95  RPYPC--THCGKKFGRKDHLKKHLRTH 119
           +P+ C    C KKF R D L +H   H
Sbjct: 93  KPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 83.0 bits (206), Expect = 7e-22
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 62  TGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT--HCGKKFGRKDHLKKHLRTH 119
           + +RP+ C    C K + +   L  H R H+G +PY C    C ++F R D LK+H R H
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score =  107 bits (271), Expect = 5e-32
 Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 4/85 (4%)

Query: 37  KKFNCP--HCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGL 94
           + + CP   C+  FS +G L  HIRIHTG++P++C    C ++F+R++ LT H R H+G 
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGE 60

Query: 95  RPYPCTHCGKKFGRKDHLKKHLRTH 119
           +P+ C  CG+KF R D  K+H + H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 87.5 bits (218), Expect = 6e-24
 Identities = 28/56 (50%), Positives = 38/56 (67%)

Query: 64  ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
           ERPY C  E+C + F+++  LTRH RIH+G +P+ C  C + F R DHL  H+RTH
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 57

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 76.4 bits (189), Expect = 1e-19
 Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 2/57 (3%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
          K F C  C   FS +  L  HIR HTGE+P+ C  + CG+ F R++E  RH +IH  
Sbjct: 33 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRHTKIHLR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGER 65
          K F C  C   F+ + + K H +IH  ++
Sbjct: 61 KPFACDICGRKFARSDERKRHTKIHLRQK 89

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  109 bits (274), Expect = 6e-32
 Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 2/86 (2%)

Query: 36  PKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLR 95
           P+   C  C  AF  + +LK H  +HTGE+P++C  E CGK F+ +  L  H RIH+G R
Sbjct: 32  PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 91

Query: 96  PYPCTH--CGKKFGRKDHLKKHLRTH 119
           PY C    C KKF +  +LK H+ TH
Sbjct: 92  PYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 95.3 bits (238), Expect = 2e-26
 Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 7/89 (7%)

Query: 35  RPKKFNCPH--CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHS 92
            P+   CPH  C   F +N  ++ H+  H G R + C    CGK+F  + +L RH+ +H+
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVC--AECGKAFVESSKLKRHQLVHT 58

Query: 93  GLRPYPCTH--CGKKFGRKDHLKKHLRTH 119
           G +P+ CT   CGK+F    +L+ H+R H
Sbjct: 59  GEKPFQCTFEGCGKRFSLDFNLRTHVRIH 87

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 77.9 bits (193), Expect = 8e-20
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)

Query: 37  KKFNCPH--CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGL 94
           K F C    C   FS +  L+ H+RIHTG+RPY C  + C K F ++  L  H   H+  
Sbjct: 61  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA 120

Query: 95  RPY 97
           +  
Sbjct: 121 KNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 41.3 bits (98), Expect = 9e-06
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 37  KKFNCPH--CNVAFSNNGQLKGHIRIHTGERPYK 68
           + + CP   CN  F+ +  LK HI  H   +  +
Sbjct: 91  RPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  108 bits (271), Expect = 3e-31
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 2/82 (2%)

Query: 40  NCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC 99
            CP    +F    +L  HIR+HTGE+P+ C    CGK F R+E L  HKR H+G +P+ C
Sbjct: 64  ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKC 123

Query: 100 TH--CGKKFGRKDHLKKHLRTH 119
               C ++F      KKH+  H
Sbjct: 124 EFEGCDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 97.0 bits (242), Expect = 9e-27
 Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 9/93 (9%)

Query: 36  PKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA-------ENCGKSFTRNEELTRHK 88
                   C+  FS   +L  H+ +     P + +           GKSF    +L  H 
Sbjct: 23  QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI 82

Query: 89  RIHSGLRPYPCTH--CGKKFGRKDHLKKHLRTH 119
           R+H+G +P+PC    CGK F R ++LK H RTH
Sbjct: 83  RVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 81.6 bits (202), Expect = 8e-21
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 37  KKFNCPH--CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGL 94
           K F CP   C   F+ +  LK H R HTGE+P+KC+ E C + F  + +  +H  +H+  
Sbjct: 89  KPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSD 148

Query: 95  RPYPCT 100
           +  P +
Sbjct: 149 KSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 78.1 bits (193), Expect = 2e-19
 Identities = 17/85 (20%), Positives = 26/85 (30%), Gaps = 11/85 (12%)

Query: 44  CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPY------ 97
              +     Q      I   +       ++C ++F+   EL  H  +     P       
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 98  ---PCTHCGKKFGRKDHLKKHLRTH 119
               C   GK F  K  L  H+R H
Sbjct: 61  YWEECPREGKSFKAKYKLVNHIRVH 85

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 58.8 bits (143), Expect = 5e-12
 Identities = 9/47 (19%), Positives = 14/47 (29%)

Query: 73  NCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
           + G S    ++    K I       P   C + F     L  H+   
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTME 48

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 46.1 bits (110), Expect = 2e-07
 Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 37  KKFNCPH--CNVAFSNNGQLKGHIRIHTGERPYKCDA 71
           K F C    C+  F+N+   K H+ +HT ++      
Sbjct: 119 KPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSSG 155

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  104 bits (262), Expect = 2e-30
 Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 2/83 (2%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
               C  C   FS   +LK H+R HTG +PYKC  + C  +   +  L +H RIHS  RP
Sbjct: 7   GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKC--KTCDYAAADSSSLNKHLRIHSDERP 64

Query: 97  YPCTHCGKKFGRKDHLKKHLRTH 119
           + C  C         L  HLR+H
Sbjct: 65  FKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 85.9 bits (214), Expect = 3e-23
 Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 2/59 (3%)

Query: 61  HTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                P+KC  E CGK F+R ++L  H R H+G++PY C  C         L KHLR H
Sbjct: 3   SGSSGPHKC--EVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH 59

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 79.8 bits (198), Expect = 9e-21
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
          K + C  C+ A +++  L  H+RIH+ ERP+KC  + C  +   + +LT H R H+G   
Sbjct: 35 KPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC--QICPYASRNSSQLTVHLRSHTGDSG 92

Query: 97 YPC 99
             
Sbjct: 93 PSS 95

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score =  103 bits (259), Expect = 6e-30
 Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 2/83 (2%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
           K+F C  C   F+ +  L  H R HT ERPY C  + C K+F R + L  H+ IHS  +P
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHERTHTDERPYTC--DICHKAFRRQDHLRDHRYIHSKEKP 73

Query: 97  YPCTHCGKKFGRKDHLKKHLRTH 119
           + C  CGK F +   L  H   H
Sbjct: 74  FKCQECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 93.7 bits (234), Expect = 4e-26
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 54  LKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLK 113
             G       ++ + C  + CG+ FT++  L  H+R H+  RPY C  C K F R+DHL+
Sbjct: 5   SSGGRLPSKTKKEFIC--KFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLR 62

Query: 114 KHLRTH 119
            H   H
Sbjct: 63  DHRYIH 68

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 79.8 bits (198), Expect = 1e-20
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
           + + C  C+ AF     L+ H  IH+ E+P+KC  + CGK F ++  L  HK +H     
Sbjct: 44  RPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC--QECGKGFCQSRTLAVHKTLHMQTSS 101

Query: 97  YPCT 100
               
Sbjct: 102 PTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 43.6 bits (104), Expect = 9e-07
 Identities = 8/35 (22%), Positives = 11/35 (31%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
           K F C  C   F  +  L  H  +H         +
Sbjct: 72  KPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAAS 106

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score =  101 bits (255), Expect = 8e-30
 Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 2/74 (2%)

Query: 46  VAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKK 105
           +       L  ++      RPY C  E+C + F+R++ELTRH RIH+G +P+ C  C + 
Sbjct: 1   MEPHPMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRN 58

Query: 106 FGRKDHLKKHLRTH 119
           F R DHL  H+RTH
Sbjct: 59  FSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 61.6 bits (150), Expect = 6e-14
 Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)

Query: 24 SHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEE 83
          ++  +      RP       C+  FS + +L  HIRIHTG++P++C    C ++F+R++ 
Sbjct: 7  NNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDH 64

Query: 84 LTRHKRIHS 92
          LT H R H+
Sbjct: 65 LTTHIRTHT 73

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  105 bits (265), Expect = 8e-30
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 2/87 (2%)

Query: 35  RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGL 94
           +    +   C  A++ N +L+ H+  HTGE+P+ C  E C K FT    LTRH   H+G 
Sbjct: 11  KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 70

Query: 95  RPYPCTH--CGKKFGRKDHLKKHLRTH 119
           + + C    C  +F  K ++KKH    
Sbjct: 71  KNFTCDSDGCDLRFTTKANMKKHFNRF 97

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 96.5 bits (241), Expect = 3e-26
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 4/89 (4%)

Query: 35  RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG- 93
           +P       C   F++   L  H   HTGE+ + CD++ C   FT    + +H       
Sbjct: 41  KPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNI 100

Query: 94  -LRPYPCT--HCGKKFGRKDHLKKHLRTH 119
            +  Y C   +CGK F + + LK H  +H
Sbjct: 101 KICVYVCHFENCGKAFKKHNQLKVHQFSH 129

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 94.6 bits (236), Expect = 1e-25
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 34  QRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
                 +  +C  AF  + QLK H   HT + PY+C  E C K F+    L RH+++H+G
Sbjct: 102 ICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161

Query: 94  L---RPYPCTHCGKKFGRKDHLKKHLRTH 119
               +   C+  GK +    +LK     H
Sbjct: 162 YPCKKDDSCSFVGKTWT--LYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 93.4 bits (233), Expect = 5e-25
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 56  GHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH--CGKKFGRKDHLK 113
           G   +    + Y C   +CG ++ +N +L  H   H+G +P+PC    C K F    HL 
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 114 KHLRTH 119
           +H  TH
Sbjct: 62  RHSLTH 67

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score =  101 bits (255), Expect = 1e-29
 Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 39  FNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYP 98
           F+C  C  +F  +  L  H+ IH+  RPY C  + CGK F +  ++ +H  IH+G +P+ 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPC--QYCGKRFHQKSDMKKHTFIHTGEKPHK 59

Query: 99  CTHCGKKFGRKDHLKKHLRTH 119
           C  CGK F +  +L  H R H
Sbjct: 60  CQVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 71.3 bits (176), Expect = 1e-17
 Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
          + + C +C   F     +K H  IHTGE+P+KC  + CGK+F+++  L  H R H+G
Sbjct: 28 RPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC--QVCGKAFSQSSNLITHSRKHTG 82

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  104 bits (263), Expect = 1e-29
 Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 2/83 (2%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
           K + CP C  +FS +  L  H R HTGE+PYKC    CGKSF+  ++LTRH+R H+G +P
Sbjct: 20  KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCP--ECGKSFSDKKDLTRHQRTHTGEKP 77

Query: 97  YPCTHCGKKFGRKDHLKKHLRTH 119
           Y C  CGK F ++ +L+ H RTH
Sbjct: 78  YKCPECGKSFSQRANLRAHQRTH 100

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  104 bits (262), Expect = 2e-29
 Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 2/83 (2%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
           K + CP C  +FS    L+ H R HTGE+PY C    CGKSF++   L  H+R H+G +P
Sbjct: 76  KPYKCPECGKSFSQRANLRAHQRTHTGEKPYACP--ECGKSFSQLAHLRAHQRTHTGEKP 133

Query: 97  YPCTHCGKKFGRKDHLKKHLRTH 119
           Y C  CGK F R+D+L  H RTH
Sbjct: 134 YKCPECGKSFSREDNLHTHQRTH 156

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  104 bits (261), Expect = 3e-29
 Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 2/83 (2%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
           K + CP C  +FS    L+ H R HTGE+PYKC    CGKSF+R + L  H+R H+G +P
Sbjct: 104 KPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP--ECGKSFSREDNLHTHQRTHTGEKP 161

Query: 97  YPCTHCGKKFGRKDHLKKHLRTH 119
           Y C  CGK F R+D L  H RTH
Sbjct: 162 YKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 99.4 bits (249), Expect = 2e-27
 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 46  VAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKK 105
           ++   +        +  GE+PY C    CGKSF+R++ L  H+R H+G +PY C  CGK 
Sbjct: 1   ISEFGSSSSVAQAALEPGEKPYAC--PECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKS 58

Query: 106 FGRKDHLKKHLRTH 119
           F  K  L +H RTH
Sbjct: 59  FSDKKDLTRHQRTH 72

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 72.9 bits (180), Expect = 4e-17
 Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 2/60 (3%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
           K + CP C  +FS    L  H R HTGE+PYKC    CGKSF+R + L  H+R H+G + 
Sbjct: 132 KPYKCPECGKSFSREDNLHTHQRTHTGEKPYKC--PECGKSFSRRDALNVHQRTHTGKKT 189

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  103 bits (260), Expect = 2e-29
 Identities = 35/83 (42%), Positives = 42/83 (50%), Gaps = 3/83 (3%)

Query: 40  NCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC 99
            C      F     L  H+R HTGE+P+KC  E C KS++R E L  H R H+G +PY C
Sbjct: 41  GCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMC 100

Query: 100 TH--CGKKFGRKDHLKKH-LRTH 119
            H  C K F       KH  RTH
Sbjct: 101 EHEGCSKAFSNASDRAKHQNRTH 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 96.5 bits (241), Expect = 1e-26
 Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 5/88 (5%)

Query: 37  KKFNCPH--CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHK-RIHSG 93
           K   C    C  ++S    LK H+R HTGE+PY C+ E C K+F+   +  +H+ R HS 
Sbjct: 66  KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125

Query: 94  LRPYPCTH--CGKKFGRKDHLKKHLRTH 119
            +PY C    C K++     L+KH++T 
Sbjct: 126 EKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 93.8 bits (234), Expect = 1e-25
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 8/91 (8%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHI---RIHTGERPYKCDAENC---GKSFTRNEELTRHKRI 90
                  C+  F +  QL  HI    IH   + + C    C    + F     L  H R 
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 91  HSGLRPYPCTH--CGKKFGRKDHLKKHLRTH 119
           H+G +P+ CT   C K + R ++LK HLR+H
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRLENLKTHLRSH 92

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 69.2 bits (170), Expect = 4e-16
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 37  KKFNCPH--CNVAFSNNGQLKGHI-RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
           K + C H  C+ AFSN      H  R H+ E+PY C    C K +T    L +H +   G
Sbjct: 96  KPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 63.0 bits (154), Expect = 1e-13
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 10/64 (15%)

Query: 64  ERPYKCDAENCGKSFTRNEELTRH---KRIHSGLRPYPCTHCG-----KKFGRKDHLKKH 115
           E   +   + C + F   E+L  H   + IH   + + C   G     + F  +  L  H
Sbjct: 1   ETDCRW--DGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH 58

Query: 116 LRTH 119
           +R H
Sbjct: 59  MRRH 62

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score =  100 bits (252), Expect = 5e-29
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 6/86 (6%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
           K F C  C   FS +  L  HIR HTGE+P+ C  + CG+ F R++E  RH+ I     P
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRHRDIQHI-LP 58

Query: 97  YPCTHCGKKFGRKDHLKKH---LRTH 119
                  +   +  HL+     L+  
Sbjct: 59  ILEDKVEELLSKNYHLENEVARLKKL 84

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 43.6 bits (104), Expect = 6e-07
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 94  LRPYPCTHCGKKFGRKDHLKKHLRTH 119
           ++P+ C  C + F R DHL  H+RTH
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTH 26

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score =  100 bits (251), Expect = 7e-29
 Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG--L 94
               C  C   F +   L  H   H+GE+PY C    CG  F R + ++ H R H G   
Sbjct: 6   SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSC--PVCGLRFKRKDRMSYHVRSHDGSVG 63

Query: 95  RPYPCTHCGKKFGRKDHLKKHL-RTH 119
           +PY C  CGK F R DHL  H+ + H
Sbjct: 64  KPYICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 87.5 bits (218), Expect = 7e-24
 Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 2/59 (3%)

Query: 61  HTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
            +G     C  E CGK F     L RHK  HSG +PY C  CG +F RKD +  H+R+H
Sbjct: 2   SSGSSGVAC--EICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH 58

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 99.2 bits (248), Expect = 1e-28
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 1/81 (1%)

Query: 40  NCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC 99
           +  +C  AF  + QLK H   HT + PY+C  E C K F+    L RH+++H+G      
Sbjct: 5   HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 64

Query: 100 THCGKKFGRKDHLKKHL-RTH 119
             C           KH+   H
Sbjct: 65  DSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 73.4 bits (181), Expect = 2e-18
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 67  YKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH--CGKKFGRKDHLKKHLRTH 119
           Y C  ENCGK+F ++ +L  H+  H+   PY C H  C K+F     LK+H + H
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 56

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 49.2 bits (118), Expect = 5e-09
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 5/58 (8%)

Query: 37 KKFNCPH--CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRH-KRIH 91
            + CPH  C+  FS   +LK H ++H G    K   ++C           +H    H
Sbjct: 30 LPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD--DSCSFVGKTWTLYLKHVAECH 85

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  100 bits (251), Expect = 2e-28
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 5/86 (5%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKR---IHSG 93
               CP C+  F +   LK H R HTGE+P++C    CGK + R E L  H+    ++  
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECP--KCGKCYFRKENLLEHEARNCMNRS 63

Query: 94  LRPYPCTHCGKKFGRKDHLKKHLRTH 119
            + + C+ C + F R+  L+ H+ +H
Sbjct: 64  EQVFTCSVCQETFRRRMELRLHMVSH 89

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 96.0 bits (240), Expect = 7e-27
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 6/87 (6%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIR---IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
           K F CP C   +     L  H     ++  E+ + C    C ++F R  EL  H   H+G
Sbjct: 34  KPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCS--VCQETFRRRMELRLHMVSHTG 91

Query: 94  LRPYPCTHCGKKFGRKDHLKKH-LRTH 119
             PY C+ C ++F +K  L+ H ++ H
Sbjct: 92  EMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 80.2 bits (199), Expect = 1e-20
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 61  HTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
            +G    +C    C K F     L  H R H+G +P+ C  CGK + RK++L +H   +
Sbjct: 2   SSGSSGVECP--TCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARN 58

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 96.4 bits (241), Expect = 1e-27
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 4/70 (5%)

Query: 52  GQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG--LRPYPCTHCGKKFGRK 109
           G      R H+GE+PY+C    C   FT++  +  H        +  + C HC     RK
Sbjct: 1   GSSGSSGRTHSGEKPYECY--ICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARK 58

Query: 110 DHLKKHLRTH 119
             L  HLR  
Sbjct: 59  SDLGVHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 69.9 bits (172), Expect = 4e-17
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 5/64 (7%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGE--RPYKCDAENCGKSFTRNEELTRH-KRIHSG 93
          K + C  C+  F+ +G +K HI     E    + C   +C     R  +L  H ++ HS 
Sbjct: 14 KPYECYICHARFTQSGTMKMHILQKHTENVAKFHC--PHCDTVIARKSDLGVHLRKQHSY 71

Query: 94 LRPY 97
            P 
Sbjct: 72 SGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 43.3 bits (103), Expect = 7e-07
 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 35 RPKKFNCPHCNVAFSNNGQLKGHIR-IHTGERPY 67
             KF+CPHC+   +    L  H+R  H+   P 
Sbjct: 42 NVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 94.8 bits (237), Expect = 2e-26
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
           K + C  C  +F++  Q   H+ +H G RPY C    CGK F     L  H +IH+G++P
Sbjct: 9   KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCG--VCGKKFKMKHHLVGHMKIHTGIKP 65

Query: 97  YPCTHCGKKFGRKDHLKKHLRTH 119
           Y C  C K+F  +D    H    
Sbjct: 66  YECNICAKRFMWRDSF--HRHVT 86

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 92.1 bits (230), Expect = 1e-25
 Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 3/61 (4%)

Query: 59  RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRT 118
              +G++ Y C    CGKSFT   +  RH  +H GLRPY C  CGKKF  K HL  H++ 
Sbjct: 3   SGSSGDKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 59

Query: 119 H 119
           H
Sbjct: 60  H 60

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 86.0 bits (214), Expect = 4e-23
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 4/76 (5%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
           + + C  C   F     L GH++IHTG +PY+C+   C K F   +    H+ + S  + 
Sbjct: 36  RPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN--ICAKRFMWRDSF--HRHVTSCTKS 91

Query: 97  YPCTHCGKKFGRKDHL 112
           Y      +        
Sbjct: 92  YEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 52.1 bits (126), Expect = 7e-10
 Identities = 7/49 (14%), Positives = 15/49 (30%), Gaps = 4/49 (8%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELT 85
           K + C  C   F        H  + +  + Y+       ++ T     +
Sbjct: 64  KPYECNICAKRFMWRDSF--HRHVTSCTKSYEAA--KAEQNTTEASGPS 108

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 93.4 bits (233), Expect = 2e-26
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 35  RPKKFNCPHCNVAFSNNGQLKGHIRI-HTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
                + P C   FSN   L  H +  H  ++ + C    CGKSF   + L  H ++HS 
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65

Query: 94  LRPYPCTHCGKKFG 107
            R Y C   G   G
Sbjct: 66  TRDYICEFSGPSSG 79

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 88.0 bits (219), Expect = 3e-24
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 61  HTGERPYKCDAENCGKSFTRNEELTRHKRI-HSGLRPYPCTH--CGKKFGRKDHLKKHLR 117
            +G     CD   CG+ F+  + L  HK+  H   + + C    CGK F  K HLK+H++
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 118 TH 119
            H
Sbjct: 62  LH 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 92.6 bits (231), Expect = 3e-26
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 4/63 (6%)

Query: 59  RIHTGERPYKCDAENCGKSFTRNEELTRHKRI--HSGLRPYPCTHCGKKFGRKDHLKKHL 116
               GE  Y+C  + C + +T      RH        ++ YPC  C K+F RKD++  H+
Sbjct: 3   FTKEGEHTYRC--KVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

Query: 117 RTH 119
           +  
Sbjct: 61  KII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 63.3 bits (155), Expect = 1e-14
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 4/60 (6%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRI--HTGERPYKCDAENCGKSFTRNEELTRHKRIHSGL 94
            + C  C+  +++      H         + Y C    C K FTR + +T H +I   +
Sbjct: 9  HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPC--PFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 6/32 (18%), Positives = 11/32 (34%)

Query: 88  KRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
           +    G   Y C  C + +    +  +H  T 
Sbjct: 2   EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTS 33

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 34.8 bits (81), Expect = 8e-04
 Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 22 FKSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTG 63
          F  H  +   +N +   + CP C   F+    +  H++I   
Sbjct: 26 FCRHYVTSHKRNVKV--YPCPFCFKEFTRKDNMTAHVKIIHK 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 91.7 bits (229), Expect = 9e-26
 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 2/69 (2%)

Query: 51  NGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKD 110
           +G            R YKCD   CGKSF+ + +L++H+R H+G +PY C  CGK F ++ 
Sbjct: 3   SGSSGRSEWQQRERRRYKCD--ECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRS 60

Query: 111 HLKKHLRTH 119
           HL  H R H
Sbjct: 61  HLIGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 75.2 bits (186), Expect = 4e-19
 Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 2/61 (3%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
          +++ C  C  +FS++  L  H R HTGE+PYKCD   CGK+F +   L  H R+H+G  P
Sbjct: 17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCD--ECGKAFIQRSHLIGHHRVHTGSGP 74

Query: 97 Y 97
           
Sbjct: 75 S 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.3 bits (98), Expect = 4e-06
 Identities = 13/32 (40%), Positives = 15/32 (46%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYK 68
          K + C  C  AF     L GH R+HTG  P  
Sbjct: 45 KPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS 76

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 91.4 bits (228), Expect = 1e-25
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 54  LKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLK 113
              H  +   ++PYKC  + C  SF     L  HK +H+G +PY C  CG +F R  +LK
Sbjct: 5   HHHHSHMTHSDKPYKC--DRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 114 KHLRTH 119
            H R H
Sbjct: 63  THTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 76.7 bits (190), Expect = 8e-20
 Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
          K + C  C  +F   G L  H  +HTGE+PY+C    CG  F R   L  H RIHSG +P
Sbjct: 16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRC--NICGAQFNRPANLKTHTRIHSGEKP 73

Query: 97 Y 97
          Y
Sbjct: 74 Y 74

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 91.0 bits (227), Expect = 2e-25
 Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)

Query: 54  LKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLK 113
             G   IH+GE+PY C    CGK+F+R+  L +H+R+H+G +PY C  CGK F +   L 
Sbjct: 2   SSGSSGIHSGEKPYGC--VECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLI 59

Query: 114 KHLRTH 119
            H R H
Sbjct: 60  NHQRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 75.6 bits (187), Expect = 2e-19
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 2/61 (3%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
          K + C  C  AFS +  L  H R+HTGE+PYKC    CGK+F++N  L  H+RIH+    
Sbjct: 13 KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCL--ECGKAFSQNSGLINHQRIHTSGPS 70

Query: 97 Y 97
           
Sbjct: 71 S 71

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 89.5 bits (223), Expect = 1e-24
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)

Query: 52  GQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG----LRPYPCTHCGKKFG 107
           G      R HTGE+PY C   +C K+F + + L  H + +         + C+ CGK F 
Sbjct: 1   GSSGSSGRTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFT 58

Query: 108 RKDHLKKHLRTH 119
           R++ + +H    
Sbjct: 59  RRNTMARHADNC 70

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 86.0 bits (214), Expect = 2e-23
 Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 6/75 (8%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGE----RPYKCDAENCGKSFTRNEELTRHKRIHS 92
           K + C HC+  F     L  H + +         + C    CGK+FTR   + RH    +
Sbjct: 14  KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCS--KCGKTFTRRNTMARHADNCA 71

Query: 93  GLRPYPCTHCGKKFG 107
           G       + G   G
Sbjct: 72  GPDGVEGENSGPSSG 86

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 53.7 bits (130), Expect = 8e-11
 Identities = 12/46 (26%), Positives = 15/46 (32%), Gaps = 2/46 (4%)

Query: 33 NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSF 78
          N  P  F C  C   F+    +  H     G    +   EN G S 
Sbjct: 42 NFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEG--ENSGPSS 85

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 84.5 bits (210), Expect = 5e-23
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 59  RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRT 118
              +   P KC    C  S +    L  H+RIH   RP+ C +C     +  +L KH++ 
Sbjct: 2   SSGSSGHPEKCS--ECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK 59

Query: 119 H 119
            
Sbjct: 60  F 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 69.8 bits (172), Expect = 3e-17
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
               C  C+ + S+   L+ H RIH  +RP+KC+   C     +   L++H +   G   
Sbjct: 8   HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCN--YCSFDTKQPSNLSKHMKKFHGDMS 65

Query: 97  YPCT 100
            P +
Sbjct: 66  GPSS 69

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 82.8 bits (205), Expect = 2e-22
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 53  QLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH--CGKKFGRKD 110
              G     +  R + C    CGK++ ++  L  H R H+G +P+ C+   C ++F R D
Sbjct: 4   GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63

Query: 111 HLKKHLRTH 119
            L +H RTH
Sbjct: 64  ELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 74.3 bits (183), Expect = 6e-19
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 23 KSHEQSMKAKNQRPKKFNCPH--CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTR 80
           S     +  + R +   C H  C   +  +  LK H R HTGE+P+ C  + C + F R
Sbjct: 2  SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 81 NEELTRHKRIH 91
          ++EL+RH+R H
Sbjct: 62 SDELSRHRRTH 72

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 80.9 bits (200), Expect = 2e-21
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 5/71 (7%)

Query: 61  HTGERPYKCDAENCGKSFTRNEELTRHKRIHS---GLRPYPCTHCGKKFGRKDHLKKHLR 117
            +G    +C+   CG +  +   L  H+R H+       +PC  CGK+F + D +  H  
Sbjct: 2   SSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRS 59

Query: 118 THFPQPRYVSC 128
              P       
Sbjct: 60  KSHPALLLAPQ 70

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 68.6 bits (168), Expect = 1e-16
 Identities = 18/75 (24%), Positives = 23/75 (30%), Gaps = 6/75 (8%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRIHT---GERPYKCDAENCGKSFTRNEELTRHKRI-HS 92
               C  C         L  H R H        + C  E CGK F + + +  H+   H 
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPC--EFCGKRFEKPDSVAAHRSKSHP 63

Query: 93  GLRPYPCTHCGKKFG 107
            L   P    G   G
Sbjct: 64  ALLLAPQESSGPSSG 78

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 77.7 bits (192), Expect = 2e-20
 Identities = 18/44 (40%), Positives = 28/44 (63%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+P+ C    CG  F+R++EL+RH+R HSG++P   +
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 50.0 bits (120), Expect = 1e-09
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 87  HKRIHSGLRPYPCTH--CGKKFGRKDHLKKHLRTH 119
                +G +P+ CT   CG +F R D L +H R+H
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 39.6 bits (93), Expect = 9e-06
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          +P     P C   FS + +L  H R H+G +P    +
Sbjct: 11 KPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS 47

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 77.5 bits (192), Expect = 2e-20
 Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 3/56 (5%)

Query: 65  RPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHL-RTH 119
           R + C  E C ++F R E L RH R H+  +PYPC  C + F R+D L +H  + H
Sbjct: 1   RSFVC--EVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 70.6 bits (174), Expect = 1e-17
 Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRH-KRIHSG 93
          + F C  C  AF+    LK H R HT E+PY C    C ++FTR + L RH ++IHSG
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCG--LCNRAFTRRDLLIRHAQKIHSG 56

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 67.2 bits (165), Expect = 2e-16
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRH-KRIHSGLRPYPCTHCGKKF 106
                +  +PY C  ++CGK F+R + L  H K++H+  RP+ C       
Sbjct: 3   SGSSGSVGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 51.8 bits (125), Expect = 2e-10
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHI-RIHTGERPYKCDAENCGKSFT 79
          K + C  C   FS    L GHI ++HT ERP+KC  +      +
Sbjct: 11 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC--QVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 44.1 bits (105), Expect = 2e-07
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLR 117
                S  +PY C  CGK F R DHL  H++
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIK 33

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 3e-16
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                +GE+PYKC    CGK+F R+  L  H+RIH+G RP   +
Sbjct: 3   SGSSGSGEKPYKC--SECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 2e-09
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 SG +PY C+ CGK F R  HL +H R H
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-07
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C  C  AF  +  L  H RIHTG RP    +
Sbjct: 11 KPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS 45

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 66.8 bits (164), Expect = 3e-16
 Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+ YKC+   CGK F+RN +L++H++IH+G +P   + 
Sbjct: 3   SGSSGTGEKRYKCN--ECGKVFSRNSQLSQHQKIHTGEKPSGPSS 45

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G + Y C  CGK F R   L +H + H
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 44.0 bits (105), Expect = 2e-07
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K++ C  C   FS N QL  H +IHTGE+P   
Sbjct: 11 KRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 3e-16
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TG++PYKC    CGK FT+N  L RH+ IH+G +P   + 
Sbjct: 3   SGSSGTGKKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +PY C  CGK F +  HL +H   H
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 2e-07
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C  C   F+ N  L  H  IHTGE+P    +
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 3e-16
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+PY C+   CGK+F  +  L +H R+H+       + 
Sbjct: 3   SGSSGTGEKPYSCN--VCGKAFVLSAHLNQHLRVHTQETLSGPSS 45

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 5e-09
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C  CGK F    HL +HLR H
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-07
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K ++C  C  AF  +  L  H+R+HT E      +
Sbjct: 11 KPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.8 bits (164), Expect = 3e-16
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                +GERPY C+   CGK+F R+  L  H + H   +    +
Sbjct: 3   SGSSGSGERPYGCN--ECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 1e-11
 Identities = 17/33 (51%), Positives = 19/33 (57%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                SG RPY C  CGK FGR  HL +HL+ H
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 7/35 (20%), Positives = 14/35 (40%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          + + C  C   F  +  L  H++ H  E+     +
Sbjct: 11 RPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS 45

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 4e-16
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                +GE+PYKC    CGK FT+N  LT H RIH+G +P   + 
Sbjct: 3   SGSSGSGEKPYKC--NECGKVFTQNSHLTNHWRIHTGEKPSGPSS 45

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 2e-09
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 SG +PY C  CGK F +  HL  H R H
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 2e-07
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C   F+ N  L  H RIHTGE+P   
Sbjct: 11 KPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 4e-16
 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+PYKC+   CGK FT+N  L RH+ IH+G +P   + 
Sbjct: 3   SGSSGTGEKPYKCN--ECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +PY C  CGK F +  HL +H   H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 2e-07
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C  C   F+ N  L  H  IHTGE+P    +
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.3 bits (163), Expect = 4e-16
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+PYKC    CGK FT+N  L RH+ IH+G +P   + 
Sbjct: 3   SGSSGTGEKPYKC--NECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.2 bits (116), Expect = 4e-09
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C  CGK F +  HL +H   H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 3e-07
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C  C   F+ N  L  H  IHTGE+P    +
Sbjct: 11 KPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 4e-16
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+P+ C   +CGK+F+ +  L +H+RIH+G +P   + 
Sbjct: 3   SGSSGTGEKPFDCI--DCGKAFSDHIGLNQHRRIHTGEKPSGPSS 45

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +P+ C  CGK F     L +H R H
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-07
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K F+C  C  AFS++  L  H RIHTGE+P    +
Sbjct: 11 KPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS 45

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 5e-16
 Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+PY+CD   C K+F+ +  LT+H+R+HSG +P   + 
Sbjct: 3   SGSSGTGEKPYECD--VCRKAFSHHASLTQHQRVHSGEKPSGPSS 45

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-08
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +PY C  C K F     L +H R H
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH 35

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-07
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C  AFS++  L  H R+H+GE+P   
Sbjct: 11 KPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 5e-16
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+PY+C    CGK+F +   LT+H+RIH+G +P   + 
Sbjct: 3   SGSSGTGEKPYRCG--ECGKAFAQKANLTQHQRIHTGEKPSGPSS 45

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 6e-09
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C  CGK F +K +L +H R H
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C  AF+    L  H RIHTGE+P   
Sbjct: 11 KPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.4 bits (163), Expect = 5e-16
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGERP+KC+   CGKSF ++  L +H+RIH+G +P   + 
Sbjct: 3   SGSSGTGERPHKCN--ECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-09
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G RP+ C  CGK F +  HL +H R H
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 5e-07
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          +   C  C  +F  +  L  H RIHTGE+P    +
Sbjct: 11 RPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.1 bits (162), Expect = 5e-16
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+PYKC    CGK+F  N   T+H+R+H+G RP   + 
Sbjct: 3   SGSSGTGEKPYKC--MECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-08
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +PY C  CGK FG      +H R H
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.9 bits (107), Expect = 1e-07
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C  C  AF +N     H R+HTG+RP    +
Sbjct: 11 KPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 66.0 bits (162), Expect = 6e-16
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+P+KC    CGK F+R   L  H ++H+G +P   + 
Sbjct: 3   SGSSGTGEKPFKCV--ECGKGFSRRSALNVHHKLHTGEKPSGPSS 45

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +P+ C  CGK F R+  L  H + H
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 44.4 bits (106), Expect = 1e-07
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K F C  C   FS    L  H ++HTGE+P    +
Sbjct: 11 KPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS 45

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 6e-16
 Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+PYKC+   CGK FT+N  L RH+R+H+G +P   + 
Sbjct: 3   SGSSGTGEKPYKCN--ECGKVFTQNSHLARHRRVHTGGKPSGPSS 45

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +PY C  CGK F +  HL +H R H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C  C   F+ N  L  H R+HTG +P    +
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS 45

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 66.0 bits (162), Expect = 6e-16
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+PYKC  + CGK+F  +  L +H  +HSG RP   +
Sbjct: 3   SGSSGTGEKPYKC--QVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 9e-09
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C  CGK F    HL +H   H
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C  C  AF  +  L  H  +H+GERP    +
Sbjct: 11 KPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS 45

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 7e-16
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+PY C    CGK+FT    L +H++IH+  +P   + 
Sbjct: 3   SGSSGTGEKPYICA--ECGKAFTIRSNLIKHQKIHTKQKPSGPSS 45

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +PY C  CGK F  + +L KH + H
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-07
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C  AF+    L  H +IHT ++P   
Sbjct: 11 KPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 65.6 bits (161), Expect = 7e-16
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+P++C    CGKSF+ + +L  H+RIH+G +P   + 
Sbjct: 3   SGSSGTGEKPFEC--AECGKSFSISSQLATHQRIHTGEKPSGPSS 45

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 48.3 bits (116), Expect = 4e-09
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +P+ C  CGK F     L  H R H
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 45.6 bits (109), Expect = 5e-08
 Identities = 16/35 (45%), Positives = 20/35 (57%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K F C  C  +FS + QL  H RIHTGE+P    +
Sbjct: 11 KPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS 45

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 7e-16
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+ Y C  + CGKSF+R   L +H+R+HSG +P   +
Sbjct: 3   SGSSGTGEKLYNC--KECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G + Y C  CGK F R   L KH R H
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 7e-08
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K +NC  C  +FS    L  H R+H+GE+P    +
Sbjct: 11 KLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS 45

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 7e-16
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+PY+C    CGK+F+  + L+ H+RIHSG +P   + 
Sbjct: 3   SGSSGTGEKPYECS--VCGKAFSHRQSLSVHQRIHSGKKPSGPSS 45

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-09
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C+ CGK F  +  L  H R H
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-07
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C  AFS+   L  H RIH+G++P   
Sbjct: 11 KPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 7e-16
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+P+KC    CGKS+ +   LT+H+R+H+G +P   + 
Sbjct: 3   SGSSGTGEKPFKCG--ECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-09
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +P+ C  CGK + ++ HL +H R H
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K F C  C  +++    L  H R+HTGE+P    +
Sbjct: 11 KPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 8e-16
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                +GE+PY CD   CGK+F  + EL RH+RIH+G +P   + 
Sbjct: 3   SGSSGSGEKPYVCD--YCGKAFGLSAELVRHQRIHTGEKPSGPSS 45

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-09
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 SG +PY C +CGK FG    L +H R H
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-07
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C +C  AF  + +L  H RIHTGE+P    +
Sbjct: 11 KPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS 45

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 9e-16
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+P+KCD   CGKSF     L RH  +H+  +P   +
Sbjct: 3   SGSSGTGEKPFKCD--ICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-09
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +P+ C  CGK F  +  L +H   H
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-07
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K F C  C  +F    +L  H  +HT E+P    +
Sbjct: 11 KPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS 45

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 9e-16
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+PY+C+   CGK+F+    LT H+ IH+G +P   + 
Sbjct: 3   SGSSGTGEKPYECN--QCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 8e-09
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C  CGK F  +  L  H   H
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 5e-07
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C  AFS    L  H  IHTG++P   
Sbjct: 11 KPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 9e-16
 Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+PYKC+   CGK+F++  +L RH+RIH+G +P   + 
Sbjct: 3   SGSSGTGEKPYKCN--ECGKAFSQTSKLARHQRIHTGEKPSGPSS 45

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C  CGK F +   L +H R H
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C  C  AFS   +L  H RIHTGE+P    +
Sbjct: 11 KPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS 45

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 9e-16
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE PY+C    CGK+F+R  +L  H+R H+G +P   + 
Sbjct: 3   SGSSGTGENPYECH--ECGKAFSRKYQLISHQRTHAGEKPSGPSS 45

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 9e-10
 Identities = 15/34 (44%), Positives = 16/34 (47%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G  PY C  CGK F RK  L  H RTH
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
            + C  C  AFS   QL  H R H GE+P    +
Sbjct: 11 NPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS 45

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.6 bits (161), Expect = 9e-16
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                + E+PYKC  E+CGK + R   L  H+R+H G +    +
Sbjct: 3   SGSSGSVEKPYKC--EDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 4e-09
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                S  +PY C  CGK + R+ +L  H R H
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 3e-07
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C  C   ++    L  H R+H GE+     +
Sbjct: 11 KPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS 45

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 1e-15
 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+PYKCD   C KSF     LT H+RIH+G +P   +
Sbjct: 3   SGSSGTGEKPYKCD--VCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 4e-08
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +PY C  C K F     L  H R H
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C+ +F     L  H RIHTGE+P   
Sbjct: 11 KPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 1e-15
 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TG +PY+C+   CGK+F++  +L RH+R+H+G +P   + 
Sbjct: 3   SGSSGTGGKPYQCN--ECGKAFSQTSKLARHQRVHTGEKPSGPSS 45

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-08
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +PY C  CGK F +   L +H R H
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C  C  AFS   +L  H R+HTGE+P    +
Sbjct: 11 KPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 65.2 bits (160), Expect = 1e-15
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+PY+C    CGK+F++   L +H+R+H+G +P   + 
Sbjct: 3   SGSSGTGEKPYECK--ECGKAFSQTTHLIQHQRVHTGEKPSGPSS 45

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 47.9 bits (115), Expect = 6e-09
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C  CGK F +  HL +H R H
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 44.4 bits (106), Expect = 1e-07
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C  C  AFS    L  H R+HTGE+P    +
Sbjct: 11 KPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS 45

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 1e-15
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGER Y+C    CGK+F R   L  H+RIH+G +P   + 
Sbjct: 3   SGSSGTGERHYEC--SECGKAFARKSTLIMHQRIHTGEKPSGPSS 45

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-09
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G R Y C+ CGK F RK  L  H R H
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 6e-07
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          + + C  C  AF+    L  H RIHTGE+P   
Sbjct: 11 RHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.3 bits (160), Expect = 1e-15
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+PY+C    CGKSFT+  +L  H++IH+G +P   + 
Sbjct: 3   SGSSGTGEKPYECS--ICGKSFTKKSQLHVHQQIHTGEKPSGPSS 45

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-09
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C+ CGK F +K  L  H + H
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C  +F+   QL  H +IHTGE+P   
Sbjct: 11 KPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 1e-15
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TG +PY C    CGK+F+    LT H+ IH+G +P   + 
Sbjct: 3   SGSSGTGVKPYMC--NECGKAFSVYSSLTTHQVIHTGEKPSGPSS 45

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G++PY C  CGK F     L  H   H
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 5e-07
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C  AFS    L  H  IHTGE+P   
Sbjct: 11 KPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 65.2 bits (160), Expect = 1e-15
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+PYKC    CGK+F  +  LT H+ IH+G +P   +
Sbjct: 3   SGSSGTGEKPYKC--NECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-08
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +PY C  CGK F    +L  H   H
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C  AF  +  L  H  IHTGE+P   
Sbjct: 11 KPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.9 bits (159), Expect = 1e-15
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+PY+C   +CGKSF +  +L  H+RIH+G  P   + 
Sbjct: 3   SGSSGTGEKPYECS--DCGKSFIKKSQLHVHQRIHTGENPSGPSS 45

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.2 bits (113), Expect = 1e-08
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +PY C+ CGK F +K  L  H R H
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C  +F    QL  H RIHTGE P   
Sbjct: 11 KPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 1e-15
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TG + ++C    CGK+FTR   L+ H++IH+G +P   + 
Sbjct: 3   SGSSGTGGKHFECT--ECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 8e-09
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G + + CT CGK F RK  L  H + H
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K F C  C  AF+    L  H +IHTGE+P   
Sbjct: 11 KHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.9 bits (159), Expect = 2e-15
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+P++C    CGKSF+ N +L  H+RIH+G  P   + 
Sbjct: 3   SGSSGTGEKPHECR--ECGKSFSFNSQLIVHQRIHTGENPSGPSS 45

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +P+ C  CGK F     L  H R H
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 16/35 (45%), Positives = 18/35 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K   C  C  +FS N QL  H RIHTGE P    +
Sbjct: 11 KPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS 45

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 64.9 bits (159), Expect = 2e-15
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+PYKC  E CGK F    +L  H  +H+G +P   +
Sbjct: 3   SGSSGTGEKPYKC--EECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.8 bits (112), Expect = 2e-08
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +PY C  CGK F  +  L  H   H
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 2e-07
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C  C   F     L  H  +HTGE+P    +
Sbjct: 11 KPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS 45

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.9 bits (159), Expect = 2e-15
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+PY C  E CGK+F  + +L  H+RIH+G +P   +
Sbjct: 3   SGSSGTGEKPYNC--EECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 8e-09
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C  CGK F     L++H R H
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 8e-08
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K +NC  C  AF ++ QL+ H RIHTGE+P    +
Sbjct: 11 KPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS 45

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.8 bits (159), Expect = 2e-15
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+PY+C    CGK+FT    L  H++IH+G +P   + 
Sbjct: 3   SGSSGTGEKPYRC--AECGKAFTDRSNLFTHQKIHTGEKPSGPSS 45

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 2e-08
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C  CGK F  + +L  H + H
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-07
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C  AF++   L  H +IHTGE+P   
Sbjct: 11 KPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 2e-15
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGER Y+C    CGK+F +   L+ H+RIH G +P   + 
Sbjct: 3   SGSSGTGERHYECS--ECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 9e-09
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G R Y C+ CGK F +K  L  H R H
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          + + C  C  AF     L  H RIH GE+P   
Sbjct: 11 RHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.4 bits (158), Expect = 2e-15
 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+PYKC    CGK F RN  L RH+ IH+G +P   +
Sbjct: 3   SGSSGTGEKPYKC--HECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 3e-09
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C  CGK F R  HL +H   H
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.2 bits (103), Expect = 3e-07
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C   F  N  L  H  IHTGE+P   
Sbjct: 11 KPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 2e-15
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+PY C+   CGKSF +   L RH+RIH+G +P   +
Sbjct: 3   SGSSGTGEKPYICN--ECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 2e-09
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +PY C  CGK F +K HL +H R H
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-07
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C  +F     L  H RIHTGE+P   
Sbjct: 11 KPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 2e-15
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+PYKC  E CGK +     L  H+++H+G RP   +
Sbjct: 3   SGSSGTGEKPYKC--EKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +PY C  CGK +  K +L  H + H
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-07
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C   +++   L  H ++HTGERP   
Sbjct: 11 KPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.4 bits (158), Expect = 2e-15
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                +GE+P+KC    CGK+F +N  L  H RIH+G +P   +
Sbjct: 3   SGSSGSGEKPFKCK--ECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-09
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 SG +P+ C  CGK F +  HL  HLR H
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-08
 Identities = 16/35 (45%), Positives = 19/35 (54%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K F C  C  AF  N  L  H+RIHTGE+P    +
Sbjct: 11 KPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS 45

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 3e-15
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                 GE+ YKCD   CGK F+++  L  H+R+H+G +P   +
Sbjct: 3   SGSSGMGEKCYKCD--VCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 G + Y C  CGK+F +  HL+ H R H
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 8e-08
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C  C   FS +  L+ H R+HTGE+P    +
Sbjct: 11 KCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS 45

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.4 bits (158), Expect = 3e-15
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGERPY C    CGK+FT    L +H++IH+G +P   + 
Sbjct: 3   SGSSGTGERPYICT--VCGKAFTDRSNLIKHQKIHTGEKPSGPSS 45

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-09
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G RPY CT CGK F  + +L KH + H
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 3e-07
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          + + C  C  AF++   L  H +IHTGE+P   
Sbjct: 11 RPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.5 bits (158), Expect = 3e-15
 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+PYKC+   CGK F  N  L+RH+RIH+G +P   + 
Sbjct: 3   SGSSGTGEKPYKCN--ECGKVFRHNSYLSRHQRIHTGEKPSGPSS 45

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C  CGK F    +L +H R H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C   F +N  L  H RIHTGE+P   
Sbjct: 11 KPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 64.1 bits (157), Expect = 3e-15
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+PY C  + CGKSF     L +H+R+HSG +P   +
Sbjct: 3   SGSSGTGEKPYNC--KECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 48.3 bits (116), Expect = 5e-09
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C  CGK F     L KH R H
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH 35

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 44.5 bits (106), Expect = 1e-07
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K +NC  C  +F     L  H R+H+GE+P   
Sbjct: 11 KPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 64.1 bits (157), Expect = 3e-15
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                +GE+PYKC    CGK + R  +L  H+R+H+G +    +
Sbjct: 3   SGSSGSGEKPYKC--VECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 4e-09
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                SG +PY C  CGK + R+  L  H R H
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 8e-08
 Identities = 10/35 (28%), Positives = 15/35 (42%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C  C   +     L  H R+HTGE+     +
Sbjct: 11 KPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS 45

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 4e-15
 Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                +GE+P+KC  E CGK FT+N +L  H+R+H+G +P   +
Sbjct: 3   SGSSGSGEKPFKC--EECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 3e-09
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 SG +P+ C  CGK+F +   L  H R H
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 8e-08
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K F C  C   F+ N QL  H R+HTGE+P    +
Sbjct: 11 KPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS 45

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 4e-15
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 56  GHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                  G++ +KC+   C K+FT++  LT H+RIH+G +P   +
Sbjct: 2   SSGSSGAGKKLFKCN--ECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 5e-08
 Identities = 9/33 (27%), Positives = 13/33 (39%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G + + C  C K F +   L  H R H
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K F C  C   F+ +  L  H RIHTGE+P    +
Sbjct: 11 KLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS 45

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.7 bits (156), Expect = 4e-15
 Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+PYKC+   CGK FT+N  L  H+RIH+G++P   +
Sbjct: 3   SGSSGTGEKPYKCN--ECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 5e-09
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C  CGK F +  HL  H R H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 1e-07
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C  C   F+ N  L  H RIHTG +P    +
Sbjct: 11 KPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS 45

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 63.7 bits (156), Expect = 4e-15
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TG++P++C   +CGKSF     L  H+RIH+G +  P +
Sbjct: 3   SGSSGTGQKPFECT--HCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 49.5 bits (119), Expect = 1e-09
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +P+ CTHCGK F  K +L  H R H
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 46.8 bits (112), Expect = 2e-08
 Identities = 15/35 (42%), Positives = 17/35 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K F C HC  +F   G L  H RIHTGE+      
Sbjct: 11 KPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG 45

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 6e-15
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+PYKC   +CGKSFT    L  H++ H+G R    +
Sbjct: 3   SGSSGTGEKPYKC--SDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 2e-08
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +PY C+ CGK F  K  L+ H + H
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C  +F+   +L+ H + HTGER    
Sbjct: 11 KPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 7e-15
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+PYKC   +CGK+FTR   L  H++ H+G R    +
Sbjct: 3   SGSSGTGEKPYKCS--DCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-09
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C+ CGK F RK  L  H ++H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C  C  AF+    L  H + HTGER     +
Sbjct: 11 KPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS 45

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 63.3 bits (155), Expect = 7e-15
 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                +GE+P++C+   CGK FT+N  L  H+R+H+G +P   +
Sbjct: 3   SGSSGSGEKPFQCE--ECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 1e-09
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 SG +P+ C  CGK+F +  HL  H R H
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 3e-08
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K F C  C   F+ N  L  H R+HTGE+P    +
Sbjct: 11 KPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS 45

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 63.3 bits (155), Expect = 7e-15
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCG 103
                +GE+P+KC  E CGK F  N +   H+R HSG +P   +  G
Sbjct: 3   SGSSGSGEKPFKC--EECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.2 bits (113), Expect = 1e-08
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                SG +P+ C  CGK F        H R+H
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.9 bits (107), Expect = 8e-08
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 3/39 (7%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCG 75
          K F C  C   F  N Q   H R H+GE+P      + G
Sbjct: 11 KPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP---SSG 46

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 62.9 bits (154), Expect = 1e-14
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TG+RPY+C    CGK+F     L  H+R H+G +P   +
Sbjct: 3   SGSSGTGQRPYECI--ECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.5 bits (119), Expect = 2e-09
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G RPY C  CGK F  K  L  H R+H
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.5 bits (101), Expect = 7e-07
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          + + C  C  AF     L  H R HTGE+P   
Sbjct: 11 RPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 1e-14
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE P+ C    CGK FT    L  H++IH+G RP   +
Sbjct: 3   SGSSGTGENPFICS--ECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 2e-08
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G  P+ C+ CGK F  K +L  H + H
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 3e-07
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
            F C  C   F++   L  H +IHTGERP   
Sbjct: 11 NPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.5 bits (153), Expect = 1e-14
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+P++C    C K+F     L  H+R H+G +P   +
Sbjct: 3   SGSSGTGEKPFECS--ECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-09
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +P+ C+ C K F  K +L  H RTH
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 2e-07
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K F C  C  AF+    L  H R HTGE+P    +
Sbjct: 11 KPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS 45

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.6 bits (153), Expect = 1e-14
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                 GE+PY+C    CGKSF+ +  LT+H   H+  +P   +
Sbjct: 3   SGSSGEGEKPYQC--SECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 9e-08
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 G +PY C+ CGK F     L +H  TH
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-07
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C  C  +FS + +L  H   HT E+P    +
Sbjct: 11 KPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSS 45

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 2e-14
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+PY+C    C K+FT+   L +H++ H+G +P   +
Sbjct: 3   SGSSGTGEKPYECK--VCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 4e-10
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C  C K F +K HL +H +TH
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 2e-07
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C+ AF+    L  H + HTGE+P   
Sbjct: 11 KPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 62.2 bits (152), Expect = 2e-14
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                 GE+PY C    CGK+F+    L  H R HSG +P   +
Sbjct: 3   SGSSGAGEKPYGCS--ECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.9 bits (120), Expect = 1e-09
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C+ CGK F  K +L  H+RTH
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 5e-07
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K + C  C  AFS+   L  H+R H+GE+P    +
Sbjct: 11 KPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS 45

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 61.8 bits (151), Expect = 2e-14
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 56 GHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPY 97
          G      GE+PYKC  E CG  F +   L  H  IH+G  P 
Sbjct: 1  GSSGSSGGEKPYKC--ETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 48.7 bits (117), Expect = 3e-09
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 G +PY C  CG +F +  HL+ H+  H
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPY 67
          K + C  C   F     L+ H+ IHTG  P 
Sbjct: 10 KPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 2e-14
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+PYKC+   CGK+F     L  H+  HSG +P   +
Sbjct: 3   SGSSGTGEKPYKCN--ECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 7e-09
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +PY C  CGK F  +  L  H  TH
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C  AF     L  H   H+GE+P   
Sbjct: 11 KPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.8 bits (151), Expect = 2e-14
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                +GE+PY C+   CGK+F++   L+ H+R H+G +P   +
Sbjct: 3   SGSSGSGEKPYGCN--ECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 3e-09
 Identities = 15/33 (45%), Positives = 17/33 (51%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                SG +PY C  CGK F +K  L  H RTH
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 1e-06
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C   FS    L  H R HTGE+P   
Sbjct: 11 KPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 61.3 bits (150), Expect = 3e-14
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC 99
               TGE+PY+C+   C K+F     L  H+R H+G      
Sbjct: 3  SGSSGTGEKPYECN--ECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.2 bits (116), Expect = 4e-09
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +PY C  C K F  K +L  H RTH
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.1 bits (100), Expect = 8e-07
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C  AF+    L  H R HTGE     
Sbjct: 11 KPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 61.4 bits (150), Expect = 3e-14
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 56 GHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPY 97
          G      GE+PY+CD   CGK+F++   L  H R+H+G  P 
Sbjct: 1  GSSGSSGGEKPYRCD--QCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 47.9 bits (115), Expect = 5e-09
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 G +PY C  CGK F +K  L  H+R H
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 15/31 (48%), Positives = 17/31 (54%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPY 67
          K + C  C  AFS  G L  HIR+HTG  P 
Sbjct: 10 KPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 61.4 bits (150), Expect = 4e-14
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TG +PY C    C K+F+   +L  H+R H+G++P   +
Sbjct: 3   SGSSGTGVKPYGCS--QCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 49.1 bits (118), Expect = 2e-09
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G++PY C+ C K F  K  L  H R+H
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 3/39 (7%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCG 75
          K + C  C   FS   QL  H R HTG +P      + G
Sbjct: 11 KPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP---SSG 46

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 5e-14
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC 99
               +G++PY+C    C K+F +   L +HKR+H+G R    
Sbjct: 3  SGSSGSGKKPYECK--ECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 1e-08
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 SG +PY C  C K F +  HL +H R H
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 2e-07
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C   F   G L  H R+HTGER    
Sbjct: 11 KPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 5e-14
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                +GERP+KC+   CGK F R   L  H R+HS  +    +
Sbjct: 3   SGSSGSGERPFKCN--ECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 5e-09
 Identities = 17/34 (50%), Positives = 19/34 (55%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 SG RP+ C  CGK FGR+ HL  HLR H
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 4e-07
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          + F C  C   F     L GH+R+H+ E+     +
Sbjct: 11 RPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS 45

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 61.0 bits (149), Expect = 6e-14
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                 GER ++C   +CGK F +     +H+RIH+G +P   +
Sbjct: 3   SGSSGHGERGHRCS--DCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.2 bits (108), Expect = 7e-08
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                  G R + C+ CGK F +  +  +H R H
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 5e-06
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          +   C  C   F        H RIHTGE+P   
Sbjct: 11 RGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 61.6 bits (149), Expect = 7e-14
 Identities = 19/68 (27%), Positives = 24/68 (35%), Gaps = 9/68 (13%)

Query: 52  GQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDH 111
           G      +IH G+R  KC    CG  F R   L+R K          C  C K   ++  
Sbjct: 4   GSSGKRQKIHLGDRSQKC--SKCGIIFIRRSTLSRRK-------TPMCEKCRKDSCQEAA 54

Query: 112 LKKHLRTH 119
           L K     
Sbjct: 55  LNKDEGNE 62

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 45.0 bits (106), Expect = 2e-07
 Identities = 10/61 (16%), Positives = 18/61 (29%), Gaps = 9/61 (14%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP 96
          +   C  C + F             +  +   C  E C K   +   L + +   SG + 
Sbjct: 17 RSQKCSKCGIIFI-------RRSTLSRRKTPMC--EKCRKDSCQEAALNKDEGNESGKKT 67

Query: 97 Y 97
           
Sbjct: 68 S 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 39.6 bits (92), Expect = 2e-05
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 80  RNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKH 115
            +    + ++IH G R   C+ CG  F R+  L + 
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR 37

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 60.2 bits (147), Expect = 9e-14
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC 99
               TG +PY C+   CGK+F     L  H R H+G      
Sbjct: 3  SGSSGTGMKPYVCN--ECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.0 bits (118), Expect = 2e-09
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G++PY C  CGK F  K +L  H RTH
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.7 bits (99), Expect = 1e-06
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C  AF +   L  H R HTGE     
Sbjct: 11 KPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 60.3 bits (147), Expect = 9e-14
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC 99
               T  + Y C    CGK+FTR   LTRH++IH+       
Sbjct: 3  SGSSGTDSKSYNC--NECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.7 bits (117), Expect = 3e-09
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +  + Y C  CGK F R  HL +H + H
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 34.9 bits (81), Expect = 5e-04
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K +NC  C  AF+    L  H +IHT +     
Sbjct: 11 KSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 60.2 bits (147), Expect = 1e-13
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)

Query: 59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC 99
             +GE PY+C    CGK+F R ++L  H+R H+G      
Sbjct: 3  SGSSGENPYECS--ECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 44.8 bits (107), Expect = 7e-08
 Identities = 17/32 (53%), Positives = 18/32 (56%)

Query: 88  KRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
               SG  PY C+ CGK F RKD L  H RTH
Sbjct: 2   SSGSSGENPYECSECGKAFNRKDQLISHQRTH 33

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 42.9 bits (102), Expect = 4e-07
 Identities = 11/33 (33%), Positives = 13/33 (39%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
            + C  C  AF+   QL  H R H GE     
Sbjct: 9  NPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 60.3 bits (147), Expect = 1e-13
 Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                 GE+ +KC    C   F++   L  H+ +H G +P   +
Sbjct: 3   SGSSGMGEKTWKC--RECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 45.2 bits (108), Expect = 7e-08
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C++ FS    L+ H  +H GE+P   
Sbjct: 11 KTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 2e-07
 Identities = 7/33 (21%), Positives = 11/33 (33%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 G + + C  C   F +   L+ H   H
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 59.9 bits (146), Expect = 1e-13
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKR-IHSGLRPYPCT 100
                TG++PY+C    CGK+F +N  L RH R  H+G +P   +
Sbjct: 3   SGSSGTGKKPYECI--ECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRT 118
                +G +PY C  CGK F +   L +H R 
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRY 34

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 40.2 bits (95), Expect = 5e-06
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIR-IHTGERPYKCDA 71
          K + C  C  AF  N  L  H R  HTGE+P    +
Sbjct: 11 KPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS 46

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 59.9 bits (146), Expect = 1e-13
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC 99
               +GE+PY+C+   CGK+F     L  H+R H+G+     
Sbjct: 3  SGSSGSGEKPYECN--ECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.7 bits (117), Expect = 3e-09
 Identities = 15/34 (44%), Positives = 16/34 (47%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 SG +PY C  CGK F  K  L  H RTH
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 10/33 (30%), Positives = 11/33 (33%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K + C  C  AF     L  H R H G      
Sbjct: 11 KPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 59.5 bits (145), Expect = 2e-13
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                 G  PYKC    C KSF+    L  H+R+H+  +P   +
Sbjct: 3   SGSSGAGVNPYKCS--QCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 45.6 bits (109), Expect = 5e-08
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
            + C  C  +FS   +L  H R+HT E+P   
Sbjct: 11 NPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 45.2 bits (108), Expect = 7e-08
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G+ PY C+ C K F  K  L  H R H
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 2e-13
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH 101
                TGE+P++C  + CG +F+ +  L +H R H    P   + 
Sbjct: 3   SGSSGTGEKPFQC--KECGMNFSWSCSLFKHLRSHERTDPSGPSS 45

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 3e-09
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G +P+ C  CG  F     L KHLR+H
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K F C  C + FS +  L  H+R H    P    +
Sbjct: 11 KPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 59.4 bits (145), Expect = 2e-13
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC 99
               TGE PY+C    CGK F+R ++L  H++ HSG      
Sbjct: 3  SGSSGTGENPYECC--ECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 15/33 (45%), Positives = 17/33 (51%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                +G  PY C  CGK F RKD L  H +TH
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.8 bits (94), Expect = 8e-06
 Identities = 9/33 (27%), Positives = 13/33 (39%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
            + C  C   FS   QL  H + H+G+     
Sbjct: 11 NPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 2e-13
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                TGE+P KC    CGK+F    +L  H+R H   +    +
Sbjct: 3   SGSSGTGEKPCKCT--ECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 6e-08
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G +P  CT CGK F  K  L  H RTH
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 5e-07
 Identities = 10/35 (28%), Positives = 13/35 (37%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K   C  C  AF    QL  H R H  ++     +
Sbjct: 11 KPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSS 45

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 58.7 bits (143), Expect = 4e-13
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                +  + ++C    CG+ FT    L +H+RIH+G +P   +
Sbjct: 3   SGSSGSSTKSHQCH--ECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.0 bits (110), Expect = 3e-08
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 S  + + C  CG+ F  K HL +H R H
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 7e-06
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K   C  C   F+    L  H RIHTGE+P   
Sbjct: 11 KSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 58.3 bits (142), Expect = 6e-13
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 56 GHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPY 97
          G      GE+PY C  E CG  F   + L  H RIH+G  P 
Sbjct: 1  GSSGSSGGEKPYPC--EICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 49.0 bits (118), Expect = 2e-09
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 G +PYPC  CG +F     LK HLR H
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 45.2 bits (108), Expect = 6e-08
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPY 67
          K + C  C   F +   LK H+RIHTG  P 
Sbjct: 10 KPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 57.9 bits (141), Expect = 7e-13
 Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 59  RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
              +GE+P+ C    C K+F+    L  H++ H+  +P   +
Sbjct: 3   SGSSGEKPFGCS--CCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.4 bits (106), Expect = 1e-07
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K F C  C  AFS+   L  H + H  E+P    +
Sbjct: 9  KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS 43

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 43.7 bits (104), Expect = 2e-07
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 88  KRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
               SG +P+ C+ C K F  K +L  H +TH
Sbjct: 2   SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.4 bits (137), Expect = 3e-12
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 57  HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT 100
                +GE+ + CD   CGK+F     L  H+R+H G +    +
Sbjct: 3   SGSSGSGEKSHTCD--ECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 3e-07
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                SG + + C  CGK F     L+ H R H
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 10/35 (28%), Positives = 14/35 (40%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDA 71
          K   C  C   F     L+ H R+H GE+     +
Sbjct: 11 KSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS 45

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 55.3 bits (134), Expect = 8e-12
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPY 97
             +G+R Y+C    CGKSF +   LT H+RIH+G  P 
Sbjct: 3  SGSSGQRVYECQ--ECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 39.9 bits (94), Expect = 6e-06
 Identities = 14/32 (43%), Positives = 15/32 (46%)

Query: 88  KRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
               SG R Y C  CGK F +K  L  H R H
Sbjct: 2   SSGSSGQRVYECQECGKSFRQKGSLTLHERIH 33

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 39.9 bits (94), Expect = 6e-06
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPY 67
          + + C  C  +F   G L  H RIHTG  P 
Sbjct: 9  RVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 56.1 bits (135), Expect = 1e-11
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 7/74 (9%)

Query: 34  QRPKKFNCPHCNVAFSNNGQLKGHI-RIHTGERP---YKCDAENC---GKSFTRNEELTR 86
           +         C+  FS   +L  H+   H G      + C  E C   GKSF    +L  
Sbjct: 21  EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80

Query: 87  HKRIHSGLRPYPCT 100
           H R+H+G +  P +
Sbjct: 81  HIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 53.0 bits (127), Expect = 2e-10
 Identities = 17/69 (24%), Positives = 24/69 (34%), Gaps = 11/69 (15%)

Query: 60  IHTGERPYKCDAENCGKSFTRNEELTRH-KRIHSGLRPYP--------CTHCGKKFGRKD 110
           I   +       ++C ++F+   EL  H    H G             C   GK F  K 
Sbjct: 19  IDEAQLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKY 76

Query: 111 HLKKHLRTH 119
            L  H+R H
Sbjct: 77  KLVNHIRVH 85

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 54.6 bits (132), Expect = 2e-11
 Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 56 GHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPY 97
          G      GE PY C    CGKSFT+   L  H+R  S   P 
Sbjct: 1  GSSGSSGGETPYLCG--QCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 42.3 bits (100), Expect = 8e-07
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 G  PY C  CGK F ++  L  H R+ 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 38.4 bits (90), Expect = 2e-05
 Identities = 8/32 (25%), Positives = 12/32 (37%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYK 68
            + C  C  +F+  G L  H R  +   P  
Sbjct: 10 TPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 54.3 bits (131), Expect = 2e-11
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
             R  +G++P+ C  C + F R DHL  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 48.1 bits (115), Expect = 5e-09
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 56 GHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH 91
          G  R  TG +P++C   +C +SF+R++ L  H++ H
Sbjct: 1  GSTRGSTGIKPFQC--PDCDRSFSRSDHLALHRKRH 34

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 54.0 bits (129), Expect = 4e-11
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 67  YKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
           Y C  E CG    +   L +H R H+ +RPY CT+C   F  K +L KH+++ 
Sbjct: 2   YIC--EECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 47.8 bits (113), Expect = 1e-08
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 38 KFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
          K+ C  C +       LK HIR HT  RPY C    C  SF     LT+H +  + 
Sbjct: 1  KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCT--YCNFSFKTKGNLTKHMKSKAH 54

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 53.0 bits (128), Expect = 5e-11
 Identities = 17/31 (54%), Positives = 22/31 (70%)

Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHSGLR 95
          RP+ C    CGK FTR++EL RHKR H+G +
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 40.3 bits (95), Expect = 3e-06
 Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 2/27 (7%)

Query: 95  RPYPCTH--CGKKFGRKDHLKKHLRTH 119
           RP+ CT   CGK+F R D L++H RTH
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTH 27

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 55.2 bits (132), Expect = 6e-11
 Identities = 19/86 (22%), Positives = 30/86 (34%), Gaps = 3/86 (3%)

Query: 37  KKFNCPHCNVAFSNNGQLKGHIRI--HTGERPYKCDAEN-CGKSFTRNEELTRHKRIHSG 93
            KF C  C+ A+    +L  H+    H  +  ++ D  N    S  R   L   +     
Sbjct: 18  SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDA 77

Query: 94  LRPYPCTHCGKKFGRKDHLKKHLRTH 119
            +   C +CG  F     L  H+   
Sbjct: 78  QKVLKCMYCGHSFESLQDLSVHMIKT 103

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 52.5 bits (125), Expect = 6e-10
 Identities = 15/79 (18%), Positives = 24/79 (30%), Gaps = 7/79 (8%)

Query: 49  SNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRI-----HSGLRPYPCTHCG 103
           S+    K +  I TG   ++C  ++C  ++    ELT H                     
Sbjct: 2   SSGSSGKLYGSIFTGASKFRC--KDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKR 59

Query: 104 KKFGRKDHLKKHLRTHFPQ 122
               RK  L +       Q
Sbjct: 60  WSKPRKRSLLEMEGKEDAQ 78

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.9 bits (125), Expect = 2e-10
 Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC 99
             +GE+PY C    C ++F+ N  L +H+++H+       
Sbjct: 3  SGSSGEKPYSC--AECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.3 bits (100), Expect = 8e-07
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 88  KRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
               SG +PY C  C + F   + L +H + H
Sbjct: 2   SSGSSGEKPYSCAECKETFSDNNRLVQHQKMH 33

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.9 bits (86), Expect = 8e-05
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          K ++C  C   FS+N +L  H ++HT +     
Sbjct: 9  KPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 32

 Score = 44.6 bits (105), Expect = 9e-08
 Identities = 15/29 (51%), Positives = 19/29 (65%)

Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIHS 92
          +RPY CD   C K+F RN +L RHK+ H 
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 44.9 bits (106), Expect = 1e-07
 Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 59  RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC 102
                 +   C+   CGK F     L RHK  HSG +PY     
Sbjct: 5   SSGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 40.3 bits (94), Expect = 5e-06
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 28 SMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC 69
          S  +  +  K+  C  C   F +   L  H   H+GE+PY  
Sbjct: 2  SSGSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSS 43

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 36.1 bits (83), Expect = 2e-04
 Identities = 9/31 (29%), Positives = 12/31 (38%)

Query: 89  RIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +   C  CGK F    HL +H  +H
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSH 35

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.1 bits (104), Expect = 2e-07
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
                GE P+KC    C + FT+   L +H+R H+ 
Sbjct: 3  SGSSGAGENPFKCS--KCDRVFTQRNYLVQHERTHAR 37

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 42.2 bits (99), Expect = 1e-06
 Identities = 10/34 (29%), Positives = 19/34 (55%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
                 +G  P+ C+ C + F ++++L +H RTH
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 45.7 bits (107), Expect = 3e-07
 Identities = 13/76 (17%), Positives = 21/76 (27%), Gaps = 4/76 (5%)

Query: 44  CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCG 103
            N    +       +        + C    C   F+ +  L +H R         C  C 
Sbjct: 52  HNPQLLDESSYLYRLLASKAISQFVC--PLCLMPFSSSVSLKQHIRYTE--HTKVCPVCK 107

Query: 104 KKFGRKDHLKKHLRTH 119
           K+F   D    H+   
Sbjct: 108 KEFTSTDSALDHVCKK 123

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 39.9 bits (92), Expect = 4e-05
 Identities = 12/87 (13%), Positives = 22/87 (25%), Gaps = 4/87 (4%)

Query: 37  KKFNCPHCNVAFSNNGQ--LKGHIRIHTGERPYKCD--AENCGKSFTRNEELTRHKRIHS 92
           KK+   H  +      +   + H      +R  +                          
Sbjct: 11  KKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASK 70

Query: 93  GLRPYPCTHCGKKFGRKDHLKKHLRTH 119
            +  + C  C   F     LK+H+R  
Sbjct: 71  AISQFVCPLCLMPFSSSVSLKQHIRYT 97

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 43.4 bits (101), Expect = 1e-06
 Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 5/88 (5%)

Query: 28  SMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRH 87
           S  +  +  + + C  CN   S+  +   H R+        C    C   F   E    H
Sbjct: 6   SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVC--PYCSLRFFSPELKQEH 61

Query: 88  KRIHSGLRPYPCTHCGKKFGRKDHLKKH 115
           +      +   C  C + F     + +H
Sbjct: 62  ES-KCEYKKLTCLECMRTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 35.6 bits (81), Expect = 9e-04
 Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 4/57 (7%)

Query: 63  GERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
            +  Y+C    C    +   E   H+R+        C +C  +F   +  ++H    
Sbjct: 13  NKEVYQCRL--CNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHESKC 65

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 40.4 bits (95), Expect = 4e-06
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 95  RPYPCTHCGKKFGRKDHLKKHLRTH 119
           R + C  C + F R++HLK+H R+H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 34.6 bits (80), Expect = 6e-04
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHSG 93
          R + C+   C ++F R E L RH R H+ 
Sbjct: 1  RSFVCEV--CTRAFARQEHLKRHYRSHTN 27

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 38.5 bits (90), Expect = 2e-05
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 62 TGERPYKCDAENCGKSFTRNEELTRHKRIHSGLR 95
            ++ + C  + CGK + +   L  H R H+G R
Sbjct: 4  GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 35.8 bits (83), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 95  RPYPCTH--CGKKFGRKDHLKKHLRTH 119
           + + C    CGK +G+  HL+ HLR H
Sbjct: 7   KQHICHIQGCGKVYGKTSHLRAHLRWH 33

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 40.6 bits (94), Expect = 6e-05
 Identities = 8/59 (13%), Positives = 14/59 (23%), Gaps = 2/59 (3%)

Query: 34  QRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHS 92
           +          +   S +    G     +    Y+C    C        +L  H   H 
Sbjct: 148 KPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHV--CSAVLFSPLDLDAHVASHG 204

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 40.6 bits (94), Expect = 7e-05
 Identities = 9/49 (18%), Positives = 14/49 (28%)

Query: 71  AENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
           AE      +++          S    Y C  C         L  H+ +H
Sbjct: 155 AEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 37.5 bits (86), Expect = 7e-04
 Identities = 5/39 (12%), Positives = 10/39 (25%)

Query: 23  KSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIH 61
                 +         + C  C+    +   L  H+  H
Sbjct: 165 HPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 47

 Score = 35.2 bits (81), Expect = 4e-04
 Identities = 8/27 (29%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 95  RPYPCTH--CGKKFGRKDHLKKHLRTH 119
           + + C    C K F R+ +++ H++TH
Sbjct: 17  KTFECLFPGCTKTFKRRYNIRSHIQTH 43

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 Length = 33

 Score = 34.9 bits (80), Expect = 4e-04
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 97  YPCTHCGKKFGRKDHLKKHLRTHF 120
           + C  C K+F R DHL KH+  H 
Sbjct: 3   FACPECPKRFMRSDHLSKHITLHE 26

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 45

 Score = 34.9 bits (79), Expect = 5e-04
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 91  HSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
            SG +PY C  CG +F RKD +  H+R+H
Sbjct: 5   SSGEKPYSCPVCGLRFKRKDRMSYHVRSH 33

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic} Length = 32

 Score = 34.7 bits (79), Expect = 6e-04
 Identities = 11/24 (45%), Positives = 15/24 (62%)

Query: 97  YPCTHCGKKFGRKDHLKKHLRTHF 120
           + C  C K+F R D L KH++T F
Sbjct: 3   FACPACPKRFMRSDALSKHIKTAF 26

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 35.9 bits (82), Expect = 7e-04
 Identities = 14/84 (16%), Positives = 24/84 (28%), Gaps = 7/84 (8%)

Query: 22  FKSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRI-HTGER---PYKCDAENCGKS 77
              H    +   +    + C +C     +      H+   H        Y C    C   
Sbjct: 2   AHHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVE--CNFL 59

Query: 78  FTRNEELTRH-KRIHSGLRPYPCT 100
             R + L+ H  + H G   +  T
Sbjct: 60  TKRYDALSEHNLKYHPGEENFKLT 83

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A Length = 29

 Score = 34.5 bits (79), Expect = 7e-04
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 97  YPCTHCGKKFGRKDHLKKHLRTH 119
           + C  C K+F R DHL  H+  H
Sbjct: 3   FACPECPKRFMRSDHLTLHILLH 25

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens} Length = 30

 Score = 34.0 bits (77), Expect = 9e-04
 Identities = 14/29 (48%), Positives = 20/29 (68%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGER 65
          K + C HC   F++ G L+ H+RIHTGE+
Sbjct: 2  KPYVCIHCQRQFADPGALQRHVRIHTGEK 30

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	141
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.89
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.88
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.88
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.87
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.86
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.85
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.85
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.85
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.84
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.84
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.84
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.84
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.84
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.82
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.82
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.81
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.81
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.8
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.8
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.79
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.79
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.79
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.78
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.78
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.74
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.74
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.73
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.69
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.68
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.67
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.65
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.64
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.63
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.63
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.62
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.59
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.59
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.59
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.57
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.56
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.56
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.56
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.56
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.55
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.55
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.53
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.52
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.52
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.51
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.51
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.5
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.5
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.49
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.49
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.49
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.48
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.47
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.47
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.45
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.44
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.44
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.43
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.42
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.41
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.41
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.4
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.4
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.4
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.39
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.38
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.38
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.37
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.35
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.35
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.32
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.31
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.3
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.3
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.3
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.26
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.25
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.25
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.22
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.21
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.21
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.21
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.21
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.21
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.21
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.21
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.21
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.21
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.21
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.21
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.2
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.2
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.19
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.19
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.19
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.19
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.18
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.17
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.15
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.15
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.14
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.12
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.09
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.07
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.03
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.03
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.02
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.02
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.01
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.0
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.0
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.99
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.95
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.94
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.92
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.92
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.92
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.92
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.91
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.91
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.9
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.89
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.89
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.88
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.88
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.87
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.86
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.86
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.85
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.85
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.84
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.84
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.83
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.83
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.82
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.82
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.81
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.79
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.79
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.78
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.78
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.77
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.77
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.73
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.66
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.64
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.64
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.63
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.58
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.58
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.55
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.55
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.54
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.5
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.5
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.49
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.49
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.49
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.48
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.48
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.47
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.43
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.43
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.4
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.75
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.74
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.38
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.35
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.34
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.33
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.33
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.33
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.31
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.3
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.29
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.27
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.27
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.24
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.23
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.2
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.2
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.19
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.19
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.18
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.17
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.16
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.16
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.16
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.16
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.15
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.13
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.38
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.38
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.09
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.37
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.06
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.04
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.0
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.24
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.99
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.83
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.98
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.9
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.45
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.06
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.02
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.12
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	90.85
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	88.7
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	88.06
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	86.89

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.89  E-value=1.5e-23  Score=129.92  Aligned_cols=94  Identities=28%  Similarity=0.501  Sum_probs=88.8

Q ss_pred             hhcCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChH
Q psy17779         31 AKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKD  110 (141)
Q Consensus        31 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~  110 (141)
                      ....|+++|.|.+|++.|.....|..|+++|.++++|.|.  .|++.|.....|..|++.|++++||.|..|++.|...+
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~   92 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCR--YCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQ   92 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECS--SSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCC--ccCeecccccchhhhccccCCCccccCCCCCCCcCCHH
Confidence            3467899999999999999999999999999999999998  89999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhCCCCCcc
Q psy17779        111 HLKKHLRTHFPQPRYV  126 (141)
Q Consensus       111 ~l~~H~~~h~~~~~~~  126 (141)
                      .|..|+++|++++|+.
T Consensus        93 ~L~~H~~~hh~~~p~~  108 (133)
T 2lt7_A           93 FMSSHIKSVHSQDPSG  108 (133)
T ss_dssp             HHHHHHHHHTCCCTTS
T ss_pred             HHHHHhHHhcCCCCCC
Confidence            9999999999887654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.88  E-value=2e-22  Score=122.18  Aligned_cols=105  Identities=37%  Similarity=0.830  Sum_probs=95.7

Q ss_pred             CCCCccccCc--chhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHH
Q psy17779         34 QRPKKFNCPH--CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDH  111 (141)
Q Consensus        34 ~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~  111 (141)
                      .++++|.|.+  |++.|.....|..|++.|.+.++|.|.+..|++.|.....|..|++.|+++++|.|..|++.|.....
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            4578899997  99999999999999999999999999744699999999999999999999999999999999999999


Q ss_pred             HHHHHHhhCCCCCcccccccccccccc
Q psy17779        112 LKKHLRTHFPQPRYVSCYPYMYGGYTS  138 (141)
Q Consensus       112 l~~H~~~h~~~~~~~~~~~~~~~~~~~  138 (141)
                      |..|+++|+++++|.|..+.|.++|.+
T Consensus        82 l~~H~~~h~~~~~~~C~~~~C~~~f~~  108 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPSCQKKFAR  108 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTTCCCEESS
T ss_pred             HHHHHHHhcCCCCeeCCCCCCccccCC
Confidence            999999999999999744578888865

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.88  E-value=3.1e-23  Score=135.39  Aligned_cols=122  Identities=36%  Similarity=0.746  Sum_probs=57.6

Q ss_pred             CchhhHHHHHHHHhhHHHHHhh--cCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHH
Q psy17779         11 DPYWSNLALEYFKSHEQSMKAK--NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHK   88 (141)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~   88 (141)
                      .+|.|.+|+..|.....+..++  +.++++|.|..|++.|.....|..|+..|.+.++|.|.  .|++.|.....|..|+
T Consensus        20 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~   97 (190)
T 2i13_A           20 KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP--ECGKSFSQRANLRAHQ   97 (190)
T ss_dssp             -----------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHH
T ss_pred             CCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCc--ccCCccCCHHHHHHHH
Confidence            3566666666666555444333  23455566666666666666666666666555555554  4555555555555555


Q ss_pred             HHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccccccccccc
Q psy17779         89 RIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGY  136 (141)
Q Consensus        89 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~  136 (141)
                      +.|.++++|.|..|++.|.....|..|+++|+++++|.|.  .|.++|
T Consensus        98 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f  143 (190)
T 2i13_A           98 RTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP--ECGKSF  143 (190)
T ss_dssp             HHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEE
T ss_pred             HhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECC--CCCccc
Confidence            5555555555555555555555555555555555554443  344444

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.87  E-value=1.4e-22  Score=132.24  Aligned_cols=124  Identities=35%  Similarity=0.742  Sum_probs=112.0

Q ss_pred             CchhhHHHHHHHHhhHHHHHhh--cCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHH
Q psy17779         11 DPYWSNLALEYFKSHEQSMKAK--NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHK   88 (141)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~   88 (141)
                      .++.|.+|+..|.....+..++  +.++++|.|..|++.|.+...|..|++.|.+.++|.|.  .|++.|.....|..|+
T Consensus        48 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~  125 (190)
T 2i13_A           48 KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACP--ECGKSFSQLAHLRAHQ  125 (190)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECT--TTCCEESSHHHHHHHH
T ss_pred             CCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCC--CCCCccCCHHHHHHHH
Confidence            4678888988887766555443  55788999999999999999999999999999999998  8999999999999999


Q ss_pred             HHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccccccccccccc
Q psy17779         89 RIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYTS  138 (141)
Q Consensus        89 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~  138 (141)
                      +.|+++++|.|..|++.|.....|..|+++|++++||.|.  .|.++|.+
T Consensus       126 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~--~C~~~f~~  173 (190)
T 2i13_A          126 RTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP--ECGKSFSR  173 (190)
T ss_dssp             HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT--TTCCEESS
T ss_pred             HHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECC--CCCCccCC
Confidence            9999999999999999999999999999999999999976  78888865

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=3.4e-22  Score=126.41  Aligned_cols=127  Identities=36%  Similarity=0.547  Sum_probs=107.1

Q ss_pred             hhhHHHHHHHHhhHHHHHhh-----cCCCCccccCc-----chhccCChHHHHHHHHHhCCCCCccccCCccCcccCChH
Q psy17779         13 YWSNLALEYFKSHEQSMKAK-----NQRPKKFNCPH-----CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNE   82 (141)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~C~~-----C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~   82 (141)
                      +.|.+|+..|.+...+..++     +.+.++|.|.+     |++.|.+...|..|++.|.+.++|.|....|++.|....
T Consensus         4 ~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   83 (155)
T 2gli_A            4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLE   83 (155)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHH
T ss_pred             CCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHH
Confidence            45666666666665555443     45678888875     348999999999999999999999997335999999999


Q ss_pred             hHHHHHHHhCCCCCeeCcc--chhccCChHHHHHHH-HhhCCCCCccccccccccccccc
Q psy17779         83 ELTRHKRIHSGLRPYPCTH--CGKKFGRKDHLKKHL-RTHFPQPRYVSCYPYMYGGYTSV  139 (141)
Q Consensus        83 ~l~~h~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~~~~~~~~~~~~~~  139 (141)
                      .|..|++.|+++++|.|..  |++.|.....|..|+ ++|.++++|.|..+.|.++|.+.
T Consensus        84 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~  143 (155)
T 2gli_A           84 NLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDP  143 (155)
T ss_dssp             HHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSH
T ss_pred             HHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCH
Confidence            9999999999999999998  999999999999998 88999999998756699998763

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.85  E-value=4.2e-21  Score=114.23  Aligned_cols=92  Identities=37%  Similarity=0.717  Sum_probs=87.6

Q ss_pred             CCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHH
Q psy17779         34 QRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLK  113 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~  113 (141)
                      ..+++|.|..|++.|.....|..|++.|.+.++|.|.  .|++.|.....|..|++.|+++++|.|..|++.|.....|.
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   90 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCD--ICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLA   90 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCS--SSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC--CccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHH
Confidence            4567899999999999999999999999999999998  89999999999999999999999999999999999999999


Q ss_pred             HHHHhhCCCCCccc
Q psy17779        114 KHLRTHFPQPRYVS  127 (141)
Q Consensus       114 ~H~~~h~~~~~~~~  127 (141)
                      .|+++|+++++|..
T Consensus        91 ~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           91 VHKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHHTTSCCCCCC
T ss_pred             HHHHHhCCCCCCcC
Confidence            99999999999853

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=5.4e-21  Score=116.52  Aligned_cols=97  Identities=30%  Similarity=0.633  Sum_probs=45.5

Q ss_pred             CCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHH---hCCCCCeeCccchhccCChHHH
Q psy17779         36 PKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRI---HSGLRPYPCTHCGKKFGRKDHL  112 (141)
Q Consensus        36 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~---h~~~~~~~C~~C~~~f~~~~~l  112 (141)
                      .++|.|..|++.|.....|..|++.|.+.++|.|.  .|++.|.....|..|+..   +.++++|.|..|++.|.....|
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            5 SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECP--KCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCT--TTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECC--CCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            34444444444444444444444444444444444  444444444444444442   2344444444444444444444


Q ss_pred             HHHHHhhCCCCCcccccccccccc
Q psy17779        113 KKHLRTHFPQPRYVSCYPYMYGGY  136 (141)
Q Consensus       113 ~~H~~~h~~~~~~~~~~~~~~~~~  136 (141)
                      ..|+++|++++||.|.  .|.++|
T Consensus        83 ~~H~~~h~~~~~~~C~--~C~~~f  104 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCS--SCSQQF  104 (124)
T ss_dssp             HHHHHHHSSSCSEECS--SSCCEE
T ss_pred             HHHHHHcCCCCCccCC--Cccchh
Confidence            4444444444444433  344444

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.85  E-value=5.5e-22  Score=125.54  Aligned_cols=118  Identities=30%  Similarity=0.561  Sum_probs=98.1

Q ss_pred             CchhhHHHHHHHHhhHHHHHhh---cCCCCc--------cccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccC
Q psy17779         11 DPYWSNLALEYFKSHEQSMKAK---NQRPKK--------FNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFT   79 (141)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~   79 (141)
                      ..+.|.+|+..|.....+..++   +.+..+        |.|..|++.|.....|..|++.|.+.++|.|..+.|++.|.
T Consensus        24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  103 (155)
T 2rpc_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFA  103 (155)
T ss_dssp             CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEES
T ss_pred             cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccC
Confidence            4567788888887776665544   223332        78999999999999999999999999999997333999999


Q ss_pred             ChHhHHHHHHHhCCCCCeeCcc--chhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         80 RNEELTRHKRIHSGLRPYPCTH--CGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        80 ~~~~l~~h~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      ....|..|++.|+++++|.|..  |++.|.....|..|+++|++++||.|-
T Consensus       104 ~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          104 RSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            9999999999999999999997  999999999999999999999998753

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.84  E-value=2.1e-21  Score=126.69  Aligned_cols=130  Identities=25%  Similarity=0.458  Sum_probs=104.2

Q ss_pred             CCCchhh--HHHHHHHHhhHHHHHh--hcCCCCcccc--CcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChH
Q psy17779          9 SLDPYWS--NLALEYFKSHEQSMKA--KNQRPKKFNC--PHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNE   82 (141)
Q Consensus         9 ~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~C--~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~   82 (141)
                      ...++.|  .+|+..|.....+..+  .+.++++|.|  ..|++.|.+...|..|++.|.++++|.|..+.|++.|.+..
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   88 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKA   88 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHH
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHH
Confidence            3456777  5777777666555433  3557788999  78999999999999999999998999986446999999999


Q ss_pred             hHHHHH-HHh-CCCCCeeC--ccchhccCChHHHHHHHHhhCCCCCcccccccccccccc
Q psy17779         83 ELTRHK-RIH-SGLRPYPC--THCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYTS  138 (141)
Q Consensus        83 ~l~~h~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~  138 (141)
                      .|..|+ +.| .++++|.|  ..|++.|.....|..|+++|++++||.|....|.++|.+
T Consensus        89 ~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~  148 (190)
T 1tf6_A           89 NMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSL  148 (190)
T ss_dssp             HHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSS
T ss_pred             HHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcC
Confidence            999998 566 46788999  889999999999999999999999998764458888865

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=7.7e-21  Score=111.10  Aligned_cols=90  Identities=34%  Similarity=0.667  Sum_probs=85.8

Q ss_pred             CCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHH
Q psy17779         34 QRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLK  113 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~  113 (141)
                      .++++|.|..|++.|.....|..|++.|.+.++|.|.  .|++.|.....|..|++.|+++++|.|..|++.|.....|.
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCK--TCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECS--SSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCC--CCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            4678899999999999999999999999999999998  89999999999999999999999999999999999999999


Q ss_pred             HHHHhhCCCCCc
Q psy17779        114 KHLRTHFPQPRY  125 (141)
Q Consensus       114 ~H~~~h~~~~~~  125 (141)
                      .|+++|+++++.
T Consensus        82 ~H~~~h~~~~~p   93 (96)
T 2dmd_A           82 VHLRSHTGDSGP   93 (96)
T ss_dssp             HHHTTCCSCCCC
T ss_pred             HHHHHhcCCCCC
Confidence            999999998764

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.84  E-value=9.4e-22  Score=120.09  Aligned_cols=91  Identities=42%  Similarity=0.834  Sum_probs=52.6

Q ss_pred             CCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc--cchhccCChHHH
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT--HCGKKFGRKDHL  112 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~--~C~~~f~~~~~l  112 (141)
                      ++++|.|..|++.|.+...|..|++.|.+.++|.|....|++.|.....|..|++.|+++++|.|.  .|++.|...+.|
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L  110 (124)
T 1ubd_C           31 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNL  110 (124)
T ss_dssp             SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTT
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHH
Confidence            455566666666666666666666666666666664223666666666666666666666666663  366666666666


Q ss_pred             HHHHHhhCCCCCc
Q psy17779        113 KKHLRTHFPQPRY  125 (141)
Q Consensus       113 ~~H~~~h~~~~~~  125 (141)
                      ..|+++|++++++
T Consensus       111 ~~H~~~H~~~k~~  123 (124)
T 1ubd_C          111 KSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHHC-----
T ss_pred             HHHHHHHcccccC
Confidence            6666666665553

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.84  E-value=5.9e-21  Score=110.29  Aligned_cols=88  Identities=42%  Similarity=0.970  Sum_probs=80.5

Q ss_pred             CCCccccC--cchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHH
Q psy17779         35 RPKKFNCP--HCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHL  112 (141)
Q Consensus        35 ~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l  112 (141)
                      ++++|.|+  .|++.|.....|..|++.|.+.++|.|.  .|++.|.....|..|++.|+++++|.|..|++.|...+.|
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   78 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDER   78 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCC--CCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHH
Confidence            35789998  5999999999999999999999999998  8999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCCCC
Q psy17779        113 KKHLRTHFPQPR  124 (141)
Q Consensus       113 ~~H~~~h~~~~~  124 (141)
                      ..|+++|++++.
T Consensus        79 ~~H~~~H~~~k~   90 (90)
T 1a1h_A           79 KRHTKIHLRQKD   90 (90)
T ss_dssp             HHHHGGGGC---
T ss_pred             HHHHHHhcccCC
Confidence            999999998763

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.84  E-value=1e-20  Score=115.44  Aligned_cols=102  Identities=32%  Similarity=0.762  Sum_probs=91.7

Q ss_pred             CCCccccC--cchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCcc--chhccCChH
Q psy17779         35 RPKKFNCP--HCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH--CGKKFGRKD  110 (141)
Q Consensus        35 ~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~--C~~~f~~~~  110 (141)
                      ++++|.|+  .|++.|.+...|..|++.| +.++|.|.  .|++.|.....|..|++.|+++++|.|..  |++.|....
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   78 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCA--ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDF   78 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECT--TTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECC--CCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHH
Confidence            35679999  8999999999999999998 78899998  89999999999999999999999999986  999999999


Q ss_pred             HHHHHHHhhCCCCCccccccccccccccc
Q psy17779        111 HLKKHLRTHFPQPRYVSCYPYMYGGYTSV  139 (141)
Q Consensus       111 ~l~~H~~~h~~~~~~~~~~~~~~~~~~~~  139 (141)
                      .|..|+++|+++++|.|....|.++|.+.
T Consensus        79 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~  107 (124)
T 1ubd_C           79 NLRTHVRIHTGDRPYVCPFDGCNKKFAQS  107 (124)
T ss_dssp             HHHHHHHHHHCCCCCCCCSTTCCCCCSST
T ss_pred             HHHHHHHHhCCCCceECCCCCCCCccCCH
Confidence            99999999999999997544688888654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=2e-20  Score=113.97  Aligned_cols=112  Identities=26%  Similarity=0.467  Sum_probs=97.6

Q ss_pred             CCchhhHHHHHHHHhhHHHHHh--hcCCCCccccCcchhccCChHHHHHHHHH---hCCCCCccccCCccCcccCChHhH
Q psy17779         10 LDPYWSNLALEYFKSHEQSMKA--KNQRPKKFNCPHCNVAFSNNGQLKGHIRI---HTGERPYKCDAENCGKSFTRNEEL   84 (141)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~C~~C~~~f~~~~~l~~h~~~---h~~~~~~~c~~~~C~~~~~~~~~l   84 (141)
                      ..++.|.+|+..|.....+..+  .+.++++|.|..|++.|.+...|..|+..   +.+.++|.|.  .|++.|.....|
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~--~C~~~f~~~~~l   82 (124)
T 2dlq_A            5 SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCS--VCQETFRRRMEL   82 (124)
T ss_dssp             CSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECS--SSCCEESSHHHH
T ss_pred             CCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECC--CCCCccCCHHHH
Confidence            3468888888888776655544  35678899999999999999999999985   5678899998  899999999999


Q ss_pred             HHHHHHhCCCCCeeCccchhccCChHHHHHHHHh-hCCCC
Q psy17779         85 TRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRT-HFPQP  123 (141)
Q Consensus        85 ~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~  123 (141)
                      ..|++.|++++||.|..|++.|.....|..|++. |.+++
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            9999999999999999999999999999999985 66553

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.82  E-value=3e-20  Score=105.44  Aligned_cols=82  Identities=37%  Similarity=0.845  Sum_probs=78.5

Q ss_pred             ccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHH
Q psy17779         38 KFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLR  117 (141)
Q Consensus        38 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  117 (141)
                      ||.|..|++.|.....|..|++.|.+.++|.|.  .|++.|.....|..|++.|+++++|.|..|++.|...+.|..|++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQ--YCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECS--SSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCC--cCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHH
Confidence            588999999999999999999999999999998  899999999999999999999999999999999999999999999


Q ss_pred             hhCC
Q psy17779        118 THFP  121 (141)
Q Consensus       118 ~h~~  121 (141)
                      +|+|
T Consensus        79 ~H~g   82 (82)
T 2kmk_A           79 KHTG   82 (82)
T ss_dssp             HHC-
T ss_pred             hhCC
Confidence            9975

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=6.6e-20  Score=109.29  Aligned_cols=93  Identities=18%  Similarity=0.328  Sum_probs=85.6

Q ss_pred             cCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHH
Q psy17779         33 NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHL  112 (141)
Q Consensus        33 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l  112 (141)
                      +.++++|.|.+|++.|.....|..|++.|.  ++|.|.  .|++.|.....|..|+. |++++||.|..|++.|.....|
T Consensus        11 h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~--~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L   85 (107)
T 1wjp_A           11 VENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCP--YCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSI   85 (107)
T ss_dssp             CCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCT--TTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCC--CCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHH
Confidence            457789999999999999999999999984  689997  89999999999999996 9999999999999999999999


Q ss_pred             HHHHH-hhCCCCCcccccc
Q psy17779        113 KKHLR-THFPQPRYVSCYP  130 (141)
Q Consensus       113 ~~H~~-~h~~~~~~~~~~~  130 (141)
                      ..|++ +|.++++|.+..+
T Consensus        86 ~~H~~~~H~~~~~~~~~~p  104 (107)
T 1wjp_A           86 WRHQVEVHNQNNMAPTSGP  104 (107)
T ss_dssp             HHHHHHTSCCCCCCCCCCS
T ss_pred             HHHHHHHcCCCCCCCCCCC
Confidence            99997 8999999887644

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.81  E-value=1.8e-19  Score=113.94  Aligned_cols=104  Identities=30%  Similarity=0.573  Sum_probs=92.9

Q ss_pred             cCCCCccccCcchhccCChHHHHHHHHH-hCCCCC--------ccccCCccCcccCChHhHHHHHHHhCCCCCeeCcc--
Q psy17779         33 NQRPKKFNCPHCNVAFSNNGQLKGHIRI-HTGERP--------YKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH--  101 (141)
Q Consensus        33 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~--------~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~--  101 (141)
                      ..+..+|.|..|++.|.+...|..|++. |.+..+        +.|.  .|++.|.....|..|++.|+++++|.|..  
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~   97 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP--REGKSFKAKYKLVNHIRVHTGEKPFPCPFPG   97 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCT--TSSCCCSSHHHHHHHTHHHHCCCSEECSCTT
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCC--CcccccCCHHHHHHHHHhcCCCCcccCCcCC
Confidence            3456779999999999999999999997 666544        6787  89999999999999999999999999998  


Q ss_pred             chhccCChHHHHHHHHhhCCCCCcccccccccccccc
Q psy17779        102 CGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYTS  138 (141)
Q Consensus       102 C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~  138 (141)
                      |++.|.....|..|+++|+++++|.|..+.|.++|.+
T Consensus        98 C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~  134 (155)
T 2rpc_A           98 CGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFAN  134 (155)
T ss_dssp             TCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSS
T ss_pred             CCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCC
Confidence            9999999999999999999999999774468998865

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.80  E-value=2.9e-20  Score=112.58  Aligned_cols=106  Identities=34%  Similarity=0.746  Sum_probs=92.3

Q ss_pred             chhhHH--HHHHHHhhHHHHHh--hcCCCCccccC--cchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHH
Q psy17779         12 PYWSNL--ALEYFKSHEQSMKA--KNQRPKKFNCP--HCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELT   85 (141)
Q Consensus        12 ~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~   85 (141)
                      ++.|.+  |+..|.....+..+  .+.++++|.|.  .|++.|.+...|..|++.|.+.++|.|.  .|++.|.....|.
T Consensus         6 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~   83 (119)
T 2jp9_A            6 PFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCK--TCQRKFSRSDHLK   83 (119)
T ss_dssp             CBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHH
T ss_pred             eeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCC--ccCchhCCHHHHH
Confidence            566665  66666655444433  34577899999  7999999999999999999999999998  8999999999999


Q ss_pred             HHHHHhCCCCCeeC--ccchhccCChHHHHHHHHhh
Q psy17779         86 RHKRIHSGLRPYPC--THCGKKFGRKDHLKKHLRTH  119 (141)
Q Consensus        86 ~h~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  119 (141)
                      .|++.|+++++|.|  ..|++.|.....|..|+++|
T Consensus        84 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           84 THTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999999999  78999999999999999876

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=3.2e-19  Score=103.98  Aligned_cols=88  Identities=36%  Similarity=0.785  Sum_probs=82.1

Q ss_pred             CCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCC--CCeeCccchhccCChHH
Q psy17779         34 QRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGL--RPYPCTHCGKKFGRKDH  111 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~--~~~~C~~C~~~f~~~~~  111 (141)
                      .++++|.|..|++.|.....|..|++.|.+.++|.|.  .|++.|.....|..|++.|+++  ++|.|..|++.|.....
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~   80 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCP--VCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDH   80 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECS--SSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCC--CCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHH
Confidence            4678899999999999999999999999999999998  8999999999999999999987  89999999999999999


Q ss_pred             HHHHHH-hhCCCC
Q psy17779        112 LKKHLR-THFPQP  123 (141)
Q Consensus       112 l~~H~~-~h~~~~  123 (141)
                      |..|++ +|.++.
T Consensus        81 L~~H~~~~H~~~~   93 (95)
T 2yt9_A           81 LNGHIKQVHSGPS   93 (95)
T ss_dssp             HHHHHHHTSCCCS
T ss_pred             HHHHHHHhcCCCC
Confidence            999986 677653

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=5e-19  Score=111.73  Aligned_cols=104  Identities=27%  Similarity=0.475  Sum_probs=92.5

Q ss_pred             CCccccCcchhccCChHHHHHHHH---HhCCCCCccccC---CccCcccCChHhHHHHHHHhCCCCCeeCcc--chhccC
Q psy17779         36 PKKFNCPHCNVAFSNNGQLKGHIR---IHTGERPYKCDA---ENCGKSFTRNEELTRHKRIHSGLRPYPCTH--CGKKFG  107 (141)
Q Consensus        36 ~~~~~C~~C~~~f~~~~~l~~h~~---~h~~~~~~~c~~---~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~--C~~~f~  107 (141)
                      +.+|.|..|++.|.+...|..|++   .|.+.++|.|.+   ..|++.|.....|..|++.|++++||.|..  |++.|.
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   80 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYS   80 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCS
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCccc
Confidence            357899999999999999999998   577888999863   344589999999999999999999999985  999999


Q ss_pred             ChHHHHHHHHhhCCCCCccccccccccccccc
Q psy17779        108 RKDHLKKHLRTHFPQPRYVSCYPYMYGGYTSV  139 (141)
Q Consensus       108 ~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~  139 (141)
                      ....|..|+++|+++++|.|..+.|.++|.+.
T Consensus        81 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~  112 (155)
T 2gli_A           81 RLENLKTHLRSHTGEKPYMCEHEGCSKAFSNA  112 (155)
T ss_dssp             SHHHHHHHHHHTTTCCCEECCSTTCCCEESSS
T ss_pred             CHHHHHHHHHHcCCCCCeeCCCCCCCCccCCH
Confidence            99999999999999999998755699999764

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.79  E-value=9.6e-20  Score=118.79  Aligned_cols=125  Identities=28%  Similarity=0.517  Sum_probs=103.5

Q ss_pred             Cchhh--HHHHHHHHhhHHHHHhh--cCCCCccccC--cchhccCChHHHHHHH-HHh-CCCCCccccCCccCcccCChH
Q psy17779         11 DPYWS--NLALEYFKSHEQSMKAK--NQRPKKFNCP--HCNVAFSNNGQLKGHI-RIH-TGERPYKCDAENCGKSFTRNE   82 (141)
Q Consensus        11 ~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~C~--~C~~~f~~~~~l~~h~-~~h-~~~~~~~c~~~~C~~~~~~~~   82 (141)
                      .++.|  .+|+..|.....+..++  +.++++|.|.  .|++.|.+...|..|+ ..| .+..+|.|.+..|++.|....
T Consensus        41 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~  120 (190)
T 1tf6_A           41 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHN  120 (190)
T ss_dssp             CSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHH
T ss_pred             CCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHH
Confidence            35777  77888887776665444  5678899999  8999999999999999 556 357789993338999999999


Q ss_pred             hHHHHHHHhCCCCCeeCcc--chhccCChHHHHHHHHhhCCCCCccccccc-ccccccc
Q psy17779         83 ELTRHKRIHSGLRPYPCTH--CGKKFGRKDHLKKHLRTHFPQPRYVSCYPY-MYGGYTS  138 (141)
Q Consensus        83 ~l~~h~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~-~~~~~~~  138 (141)
                      .|..|++.|++++||.|..  |++.|...+.|..|+++|++   |.|..+. |...|.+
T Consensus       121 ~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~  176 (190)
T 1tf6_A          121 QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKT  176 (190)
T ss_dssp             HHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSC
T ss_pred             HHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCcccc
Confidence            9999999999999999988  99999999999999999988   4444212 8888865

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.79  E-value=7e-19  Score=103.36  Aligned_cols=88  Identities=41%  Similarity=0.903  Sum_probs=81.8

Q ss_pred             CCCCccccCc--chhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHH
Q psy17779         34 QRPKKFNCPH--CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDH  111 (141)
Q Consensus        34 ~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~  111 (141)
                      ...++|.|..  |++.|.....|..|++.|.+.++|.|.+..|++.|.....|..|++.|+++++|.|..|++.|.....
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   90 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDH   90 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHH
Confidence            4567799996  99999999999999999999999999644699999999999999999999999999999999999999


Q ss_pred             HHHHHHhhCC
Q psy17779        112 LKKHLRTHFP  121 (141)
Q Consensus       112 l~~H~~~h~~  121 (141)
                      |..|+++|++
T Consensus        91 l~~H~~~H~~  100 (100)
T 2ebt_A           91 LALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHCC
T ss_pred             HHHHHHHhCC
Confidence            9999999964

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.78  E-value=6.1e-19  Score=101.51  Aligned_cols=85  Identities=45%  Similarity=1.016  Sum_probs=79.6

Q ss_pred             CCccccCc--chhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHH
Q psy17779         36 PKKFNCPH--CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLK  113 (141)
Q Consensus        36 ~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~  113 (141)
                      .++|.|..  |++.|.....|..|++.|.+.++|.|.+..|++.|.....|..|++.|+++++|.|..|++.|...+.|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            46799999  9999999999999999999999999964469999999999999999999999999999999999999999


Q ss_pred             HHHHhhC
Q psy17779        114 KHLRTHF  120 (141)
Q Consensus       114 ~H~~~h~  120 (141)
                      .|+++|.
T Consensus        83 ~H~~~H~   89 (89)
T 2wbs_A           83 LHMKRHF   89 (89)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhhC
Confidence            9999883

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.78  E-value=7.4e-19  Score=105.12  Aligned_cols=86  Identities=34%  Similarity=0.820  Sum_probs=81.9

Q ss_pred             cCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHH
Q psy17779         33 NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHL  112 (141)
Q Consensus        33 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l  112 (141)
                      +.++++|.| .|++.|.....|..|++.|.+.++|.|.  .|++.|.....|..|++.|+++++|.|..|++.|.....|
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCG--VCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECT--TTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCC--CCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            467889999 9999999999999999999999999998  8999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCC
Q psy17779        113 KKHLRTHFP  121 (141)
Q Consensus       113 ~~H~~~h~~  121 (141)
                      ..|++.|+.
T Consensus        82 ~~H~~~~~~   90 (110)
T 2csh_A           82 HRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHccc
Confidence            999998864

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.74  E-value=2.8e-18  Score=91.80  Aligned_cols=58  Identities=41%  Similarity=0.960  Sum_probs=44.4

Q ss_pred             CCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCC
Q psy17779         64 ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        64 ~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      ++||.|.  .|++.|.....|..|+++|++++||.|..|+++|...+.|..|+++|+|++
T Consensus         2 EKpy~C~--~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCN--FCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECT--TTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCC--CCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            4677776  777777777777777777777778888888888888888888887777764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.74  E-value=2.3e-19  Score=111.03  Aligned_cols=96  Identities=24%  Similarity=0.354  Sum_probs=83.7

Q ss_pred             chhhHHHHHHHHhhHHHHHhh--cCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHH
Q psy17779         12 PYWSNLALEYFKSHEQSMKAK--NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKR   89 (141)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~   89 (141)
                      +|.|.+|+..|.....+..++  +.++++|.|.+|++.|.+...|..|+++|.++++|.|.  .|++.|.....|..|++
T Consensus        22 ~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~   99 (133)
T 2lt7_A           22 YYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCL--ACGKSFINYQFMSSHIK   99 (133)
T ss_dssp             EEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEES--SSCCEESSHHHHHHHHH
T ss_pred             CeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCC--CCCCCcCCHHHHHHHhH
Confidence            588999999888776665443  56889999999999999999999999999999999998  89999999999999999


Q ss_pred             HhCCCC------CeeCccchhccCCh
Q psy17779         90 IHSGLR------PYPCTHCGKKFGRK  109 (141)
Q Consensus        90 ~h~~~~------~~~C~~C~~~f~~~  109 (141)
                      .|++++      +|.|..|+..|...
T Consensus       100 ~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A          100 SVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HhcCCCCCCCCCCeecCCCCchhhhc
Confidence            988764      58899999877643

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.73  E-value=2e-18  Score=104.02  Aligned_cols=93  Identities=19%  Similarity=0.326  Sum_probs=82.3

Q ss_pred             hcCCCCccccCcchhccCChHHHHHHHHH--hCCCCCcc-ccCCccCccc--CChHhHHHHHHHhCCCCCeeCccchhcc
Q psy17779         32 KNQRPKKFNCPHCNVAFSNNGQLKGHIRI--HTGERPYK-CDAENCGKSF--TRNEELTRHKRIHSGLRPYPCTHCGKKF  106 (141)
Q Consensus        32 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~--h~~~~~~~-c~~~~C~~~~--~~~~~l~~h~~~h~~~~~~~C~~C~~~f  106 (141)
                      .+.++++|.|..|++.|.....|..|++.  |.+.+++. |.  .|+..|  .....|..|++.|++++||.|..|++.|
T Consensus        13 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~--~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f   90 (115)
T 2dmi_A           13 IFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDN--NNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSF   90 (115)
T ss_dssp             CCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCC--CCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBC
T ss_pred             eeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCC--CCCcccccccHHHHHHHhhccCCCcceECCCCCCcc
Confidence            35678899999999999999999999998  66666554 86  899988  8889999999999999999999999999


Q ss_pred             CChHHHHHHHHhhCCCCCcc
Q psy17779        107 GRKDHLKKHLRTHFPQPRYV  126 (141)
Q Consensus       107 ~~~~~l~~H~~~h~~~~~~~  126 (141)
                      .....|..|+++|+......
T Consensus        91 ~~~~~L~~H~~~hh~~~~~~  110 (115)
T 2dmi_A           91 ESLQDLSVHMIKTKHYQKVS  110 (115)
T ss_dssp             SSHHHHHHHHHHTTTTTCSC
T ss_pred             CCHHHHHHHHHHhCCcccCC
Confidence            99999999999988766544

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.69  E-value=2.9e-17  Score=87.79  Aligned_cols=58  Identities=33%  Similarity=0.731  Sum_probs=55.4

Q ss_pred             CCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCC
Q psy17779         36 PKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLR   95 (141)
Q Consensus        36 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~   95 (141)
                      ++||.|.+|++.|.....|..|+++|.++++|.|.  .|++.|.....|..|+++|++++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~--~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCP--ECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECT--TTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECC--CCCCCcCCHHHHHHHhCccCCCC
Confidence            68999999999999999999999999999999998  99999999999999999999874

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.68  E-value=8.1e-17  Score=91.64  Aligned_cols=80  Identities=35%  Similarity=0.686  Sum_probs=74.3

Q ss_pred             cccc--CcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCcc---chhccCChHHH
Q psy17779         38 KFNC--PHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH---CGKKFGRKDHL  112 (141)
Q Consensus        38 ~~~C--~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~---C~~~f~~~~~l  112 (141)
                      ||.|  ..|++.|.....|..|++.|.++++|.|..+.|++.|.....|..|++.|++   |.|..   |++.|.....|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            5889  8899999999999999999999999999722399999999999999999988   99999   99999999999


Q ss_pred             HHHHHhhC
Q psy17779        113 KKHLRTHF  120 (141)
Q Consensus       113 ~~H~~~h~  120 (141)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99999875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.67  E-value=6.7e-18  Score=97.16  Aligned_cols=82  Identities=34%  Similarity=0.654  Sum_probs=76.9

Q ss_pred             CCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHH
Q psy17779         36 PKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKH  115 (141)
Q Consensus        36 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H  115 (141)
                      +++|.|..|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|++.|++ .++.|..|++.|.....|..|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H   77 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD--ICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENE   77 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT--TTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCC--CCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHH
Confidence            47899999999999999999999999999999998  899999999999999999885 789999999999999999999


Q ss_pred             HHhhC
Q psy17779        116 LRTHF  120 (141)
Q Consensus       116 ~~~h~  120 (141)
                      ++.++
T Consensus        78 ~~~~h   82 (88)
T 1llm_C           78 VARLK   82 (88)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98754

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=2.2e-16  Score=88.79  Aligned_cols=72  Identities=31%  Similarity=0.636  Sum_probs=43.1

Q ss_pred             CCCccccCc--chhccCChHHHHHHHH-HhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhcc
Q psy17779         35 RPKKFNCPH--CNVAFSNNGQLKGHIR-IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKF  106 (141)
Q Consensus        35 ~~~~~~C~~--C~~~f~~~~~l~~h~~-~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f  106 (141)
                      ++++|.|..  |++.|.+...|..|++ .|.+.++|.|..+.|++.|.....|..|++.|++++||.|..|++.|
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            344555554  6666666666666665 46666666665222666666666666666666666666666666555

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=5.8e-16  Score=87.04  Aligned_cols=74  Identities=30%  Similarity=0.641  Sum_probs=67.5

Q ss_pred             CCCCCccccCCccCcccCChHhHHHHHH-HhCCCCCeeCcc--chhccCChHHHHHHHHhhCCCCCccccccccccccc
Q psy17779         62 TGERPYKCDAENCGKSFTRNEELTRHKR-IHSGLRPYPCTH--CGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYT  137 (141)
Q Consensus        62 ~~~~~~~c~~~~C~~~~~~~~~l~~h~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~  137 (141)
                      .++++|.|.++.|++.|.....|..|++ .|.++++|.|..  |++.|.....|..|+++|++++||.|.  .|.++|+
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE--FSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC--SSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCC--CCCCCCC
Confidence            4567899986679999999999999999 799999999999  999999999999999999999999977  6888874

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=7.8e-16  Score=86.24  Aligned_cols=65  Identities=42%  Similarity=0.880  Sum_probs=50.5

Q ss_pred             hCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccc
Q psy17779         61 HTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVS  127 (141)
Q Consensus        61 h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  127 (141)
                      +.++++|.|.  .|++.|.....|..|++.|+++++|.|..|++.|.....|..|+++|++++||.|
T Consensus        13 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCD--ECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCS--SSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCCEECC--CCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4456677776  7888888888888888778888888888888888888888888888888887764

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.63  E-value=1.2e-15  Score=84.91  Aligned_cols=64  Identities=41%  Similarity=0.901  Sum_probs=50.4

Q ss_pred             HhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCc
Q psy17779         60 IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRY  125 (141)
Q Consensus        60 ~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  125 (141)
                      .+.+.++|.|.  .|++.|.....|..|++.|+++++|.|..|++.|.....|..|+++|++++||
T Consensus        11 ~~~~~~~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCD--RCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCT--TSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECC--CCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            35556777776  78888888888888888888888888888888888888888888888888775

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=8.9e-17  Score=94.30  Aligned_cols=79  Identities=18%  Similarity=0.251  Sum_probs=70.2

Q ss_pred             ccCChHHHHHHHHHhCCCCCccccCCccCcccC-ChHhHHHHHHHhCC-CCCeeCccchhccCChHHHHHHHHhhCCCCC
Q psy17779         47 AFSNNGQLKGHIRIHTGERPYKCDAENCGKSFT-RNEELTRHKRIHSG-LRPYPCTHCGKKFGRKDHLKKHLRTHFPQPR  124 (141)
Q Consensus        47 ~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~-~~~~l~~h~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  124 (141)
                      .+.....+..|++.|.+.++|.|.  .|++.|. ....|..|++.|++ +++|.|..|++.|.....|..|+++|++++|
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~--~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCP--TCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCT--TTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCC--CCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            344555667899999999999998  8999999 99999999999998 9999999999999999999999999999998


Q ss_pred             ccc
Q psy17779        125 YVS  127 (141)
Q Consensus       125 ~~~  127 (141)
                      ...
T Consensus        83 ~~~   85 (98)
T 2gqj_A           83 SDA   85 (98)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            654

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=2.1e-15  Score=84.42  Aligned_cols=65  Identities=40%  Similarity=0.917  Sum_probs=61.5

Q ss_pred             cCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         33 NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        33 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      ..++++|.|..|++.|.....|..|++.|.+.++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCD--ECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECS--SSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCC--CCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            45678999999999999999999999999999999998  899999999999999999999999987

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=7.3e-16  Score=87.91  Aligned_cols=73  Identities=27%  Similarity=0.557  Sum_probs=52.7

Q ss_pred             HHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCC----CCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         54 LKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGL----RPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        54 l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |.+|+++|.++++|.|.  .|++.|.....|..|++.++.+    ++|.|..|++.|.....|..|+++|++++++.+.
T Consensus         3 ~~~H~~~H~~~k~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~   79 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGE   79 (86)
T ss_dssp             TTCCSTTCCCCCCEECS--SSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCC
T ss_pred             cccccceecCCCCCcCC--CCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccC
Confidence            34566677777777776  6777777777777777665554    5777777777777777777777777777777655

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=4e-15  Score=86.94  Aligned_cols=76  Identities=17%  Similarity=0.271  Sum_probs=68.8

Q ss_pred             ccCChHHHHHHHHHhCCCCCccccCCccCccc-CChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHH-HHhhCCCCC
Q psy17779         47 AFSNNGQLKGHIRIHTGERPYKCDAENCGKSF-TRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKH-LRTHFPQPR  124 (141)
Q Consensus        47 ~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~-~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~  124 (141)
                      .|.....|..|++.+.+.++|.|.  .|++.| .....|..|++.| +++||.|..|++.|.....|..| +++|++ +|
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~--~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~-~p   90 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCP--TCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS-LP   90 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECT--TTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC-CS
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCC--CCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC-CC
Confidence            567778888999999999999998  899999 9999999999999 99999999999999999999999 888875 56


Q ss_pred             cc
Q psy17779        125 YV  126 (141)
Q Consensus       125 ~~  126 (141)
                      |+
T Consensus        91 ~~   92 (96)
T 2ctd_A           91 SG   92 (96)
T ss_dssp             SC
T ss_pred             CC
Confidence            55

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=5e-15  Score=87.31  Aligned_cols=65  Identities=20%  Similarity=0.391  Sum_probs=30.8

Q ss_pred             CCCccccCcchhccCChHHHHHHHH-Hh---CCCCCccccCCccCcccCChHhHHHH-HHHhCCCCCeeCcc
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIR-IH---TGERPYKCDAENCGKSFTRNEELTRH-KRIHSGLRPYPCTH  101 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~-~h---~~~~~~~c~~~~C~~~~~~~~~l~~h-~~~h~~~~~~~C~~  101 (141)
                      +++||.|..|++.|.....|..|++ .|   .++++|.|.  .|++.|.....|..| ++.|++++||.|.+
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~--~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCV--ECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEET--TTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCC--CCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            4445555555555555555555544 24   233444444  444444444444444 34444444444443

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=5e-15  Score=81.43  Aligned_cols=64  Identities=27%  Similarity=0.509  Sum_probs=48.6

Q ss_pred             hCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcc
Q psy17779         61 HTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYV  126 (141)
Q Consensus        61 h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  126 (141)
                      |.++++|.|.  .|++.|.....|..|++.|+++++|.|..|++.|.....|..|+++|++++|..
T Consensus         4 ~~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            4 GSSGHPEKCS--ECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             CCCCCSEECS--SSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            4556777776  777777777777777777777777888888888888888888888877777643

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.56  E-value=5.6e-15  Score=84.85  Aligned_cols=73  Identities=38%  Similarity=0.824  Sum_probs=66.2

Q ss_pred             CCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccccccccccccc
Q psy17779         64 ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYTS  138 (141)
Q Consensus        64 ~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~  138 (141)
                      +++|.|.+..|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++|.|.  .|.+.|.+
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~   74 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD--ICGRKFAR   74 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT--TTCCEESS
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCC--CCCchhCC
Confidence            56889964469999999999999999999999999999999999999999999999999999977  68888865

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.56  E-value=1.1e-14  Score=84.68  Aligned_cols=74  Identities=31%  Similarity=0.625  Sum_probs=68.2

Q ss_pred             hCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccccccccccccc
Q psy17779         61 HTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYTS  138 (141)
Q Consensus        61 h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~  138 (141)
                      +.++++|.|.  .|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++|.|.  .|.+.|.+
T Consensus         3 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~   76 (96)
T 2dmd_A            3 SGSSGPHKCE--VCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ--ICPYASRN   76 (96)
T ss_dssp             CCCCCCCCBT--TTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECS--SSSCEESS
T ss_pred             CCCCcCeECC--CCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCC--CCCCccCC
Confidence            3567889998  89999999999999999999999999999999999999999999999999999977  68888865

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.56  E-value=1.2e-14  Score=80.74  Aligned_cols=65  Identities=42%  Similarity=0.951  Sum_probs=60.4

Q ss_pred             hhcCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCe
Q psy17779         31 AKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPY   97 (141)
Q Consensus        31 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~   97 (141)
                      ....++++|.|..|++.|.....|..|++.|.+.++|.|.  .|++.|.....|..|++.|++++||
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCN--ICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECT--TTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECC--CCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3456788999999999999999999999999999999998  8999999999999999999999885

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.55  E-value=5.9e-15  Score=87.36  Aligned_cols=88  Identities=24%  Similarity=0.532  Sum_probs=77.1

Q ss_pred             CCchhhHHHHHHHHhhHHHHHh--hcCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHH
Q psy17779         10 LDPYWSNLALEYFKSHEQSMKA--KNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRH   87 (141)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h   87 (141)
                      ..++.|.+|...|.....+..+  .+.++++|.|..|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ--ECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCS--SSCCCCSSHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECC--CcCCcccCHHHHHHH
Confidence            4478899999888766555443  456788999999999999999999999999999999998  899999999999999


Q ss_pred             HHHhCCCCCeeC
Q psy17779         88 KRIHSGLRPYPC   99 (141)
Q Consensus        88 ~~~h~~~~~~~C   99 (141)
                      ++.|++++++..
T Consensus        93 ~~~H~~~~~~~~  104 (106)
T 2ee8_A           93 KTLHMQTSSPTA  104 (106)
T ss_dssp             HHHTTSCCCCCC
T ss_pred             HHHhCCCCCCcC
Confidence            999999998754

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=5.2e-15  Score=87.23  Aligned_cols=72  Identities=22%  Similarity=0.275  Sum_probs=64.0

Q ss_pred             hCCCCCccccCCccCcccCChHhHHHHHH-Hh---CCCCCeeCccchhccCChHHHHHH-HHhhCCCCCcccccccccc
Q psy17779         61 HTGERPYKCDAENCGKSFTRNEELTRHKR-IH---SGLRPYPCTHCGKKFGRKDHLKKH-LRTHFPQPRYVSCYPYMYG  134 (141)
Q Consensus        61 h~~~~~~~c~~~~C~~~~~~~~~l~~h~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~~~~~~~~~  134 (141)
                      ..++++|.|.  .|++.|.....|..|++ .|   .+++||.|..|++.|...+.|..| +++|++++||.|.....+.
T Consensus        13 ~~gekpy~C~--~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~~~   89 (102)
T 2ghf_A           13 KKVEGGYECK--YCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKRNN   89 (102)
T ss_dssp             CCCCSSEECS--SCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCCSS
T ss_pred             CCCCcCcCCC--CCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccCCC
Confidence            4678899998  89999999999999997 58   568999999999999999999999 8999999999987644443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=9.7e-15  Score=80.70  Aligned_cols=64  Identities=45%  Similarity=1.004  Sum_probs=52.4

Q ss_pred             HHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCC
Q psy17779         59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPR  124 (141)
Q Consensus        59 ~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  124 (141)
                      +.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|++.|.....|..|+++|+++.+
T Consensus         7 ~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            7 GIHSGEKPYGCV--ECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             CTTTTCCCEECS--SSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             cccCCCCCccCC--CCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            457777888887  7888888888888888888888888888888888888888888888877654

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.52  E-value=3.5e-14  Score=82.34  Aligned_cols=73  Identities=37%  Similarity=0.718  Sum_probs=66.9

Q ss_pred             CCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCC--CCcccccccccccccc
Q psy17779         62 TGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQ--PRYVSCYPYMYGGYTS  138 (141)
Q Consensus        62 ~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~~~~~~~~~~~~~  138 (141)
                      .++++|.|.  .|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++  ++|.|.  .|.+.|.+
T Consensus         3 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~--~C~~~f~~   77 (95)
T 2yt9_A            3 SGSSGVACE--ICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ--SCGKGFSR   77 (95)
T ss_dssp             CCCSCEECS--SSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCS--SSCCCBSS
T ss_pred             CCCCCeECC--CCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECC--CccchhCC
Confidence            456789998  89999999999999999999999999999999999999999999999987  888876  68888865

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=3.6e-14  Score=80.78  Aligned_cols=73  Identities=25%  Similarity=0.533  Sum_probs=66.5

Q ss_pred             hcCCCCccccCcchhccCChHHHHHHHHHhCCC----CCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhcc
Q psy17779         32 KNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGE----RPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKF  106 (141)
Q Consensus        32 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~----~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f  106 (141)
                      .+.++++|.|..|++.|.....|..|++.++..    ++|.|.  .|++.|.....|..|++.|++++++.|..|+.+|
T Consensus         9 ~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A            9 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCS--KCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECS--SSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             eecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECC--CCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            456789999999999999999999999887765    689998  8999999999999999999999999999998765

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.51  E-value=4.2e-14  Score=74.44  Aligned_cols=57  Identities=33%  Similarity=0.761  Sum_probs=45.6

Q ss_pred             CccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCC
Q psy17779         66 PYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPR  124 (141)
Q Consensus        66 ~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  124 (141)
                      ||.|.  .|++.|.....|..|++.|++++||.|..|++.|.....|..|+++|+++++
T Consensus         1 p~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~kk   57 (57)
T 1bbo_A            1 KYICE--ECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK   57 (57)
T ss_dssp             CCBCT--TTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCCC
T ss_pred             CCcCC--CCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccCC
Confidence            45676  7888888888888888888888888888888888888888888888877763

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.51  E-value=2.1e-14  Score=81.01  Aligned_cols=69  Identities=38%  Similarity=0.716  Sum_probs=64.1

Q ss_pred             CccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccccccccccccc
Q psy17779         66 PYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYTS  138 (141)
Q Consensus        66 ~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~  138 (141)
                      ||.|.  .|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++|.|.  .|.++|.+
T Consensus         1 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~   69 (82)
T 2kmk_A            1 SFDCK--ICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ--VCGKAFSQ   69 (82)
T ss_dssp             CEECS--SSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECT--TTSCEESS
T ss_pred             CccCC--CCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCC--CcchhhCC
Confidence            46787  89999999999999999999999999999999999999999999999999999977  68888865

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=4.4e-16  Score=93.64  Aligned_cols=83  Identities=22%  Similarity=0.210  Sum_probs=73.6

Q ss_pred             HHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHH--hCCCCCee-Cccchhcc--CChHHHHHHHHhhCCCCCcc
Q psy17779         52 GQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRI--HSGLRPYP-CTHCGKKF--GRKDHLKKHLRTHFPQPRYV  126 (141)
Q Consensus        52 ~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~h~~~~~~~  126 (141)
                      ..|..|++.|.++++|.|.  .|++.|.....|..|++.  |.+++++. |..|++.|  .....|..|+++|++++||.
T Consensus         5 ~~l~~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~   82 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCK--DCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLK   82 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBS--SSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCB
T ss_pred             hhhhhheeeeCCCCCEECC--ccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceE
Confidence            4567788899999999998  899999999999999998  77777655 99999998  89999999999999999998


Q ss_pred             cccccccccccc
Q psy17779        127 SCYPYMYGGYTS  138 (141)
Q Consensus       127 ~~~~~~~~~~~~  138 (141)
                      |.  .|.++|.+
T Consensus        83 C~--~C~k~f~~   92 (115)
T 2dmi_A           83 CM--YCGHSFES   92 (115)
T ss_dssp             CS--SSCCBCSS
T ss_pred             CC--CCCCccCC
Confidence            77  78888865

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=4.2e-14  Score=84.21  Aligned_cols=74  Identities=39%  Similarity=0.728  Sum_probs=68.3

Q ss_pred             HhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccccccccccccc
Q psy17779         60 IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYTS  138 (141)
Q Consensus        60 ~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~  138 (141)
                      .|.++++|.|   .|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+++++|.|.  .|.+.|.+
T Consensus         4 ~h~~~k~~~C---~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~   77 (110)
T 2csh_A            4 GSSGDKLYPC---QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN--ICAKRFMW   77 (110)
T ss_dssp             CCCCCCCEEC---TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECS--SSCCEESC
T ss_pred             CCCCCCCEec---cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCC--CCcchhcC
Confidence            4678889999   49999999999999999999999999999999999999999999999999999877  68888864

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.49  E-value=4.3e-14  Score=80.58  Aligned_cols=62  Identities=24%  Similarity=0.533  Sum_probs=49.4

Q ss_pred             HhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHH-HhhCCCC
Q psy17779         60 IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHL-RTHFPQP  123 (141)
Q Consensus        60 ~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~  123 (141)
                      .+...+++.|.  .|++.|.....|..|++.|++++||.|..|++.|.....|..|+ ++|.+|.
T Consensus        22 ~~~~~~~h~C~--~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           22 LSASAECHLCP--VCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SCCCCTTEECT--TSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCEECC--CCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            34556677887  78888888888888888888888888888888888888888886 4576664

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.49  E-value=6.7e-15  Score=87.39  Aligned_cols=89  Identities=17%  Similarity=0.271  Sum_probs=75.7

Q ss_pred             CCCchhhHHHHHHHHhhHHHHHhhcCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHH
Q psy17779          9 SLDPYWSNLALEYFKSHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHK   88 (141)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~   88 (141)
                      ...++.|.+|...|.....+..++....++|.|..|++.|.....|..|++ |.++++|.|.  .|++.|.....|..|+
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~--~C~~~f~~~~~L~~H~   89 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCL--ECMRTFKSSFSIWRHQ   89 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEG--GGTEECSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCc--cccchhCCHHHHHHHH
Confidence            345788999988887766665544333468999999999999999999996 9999999998  8999999999999999


Q ss_pred             H-HhCCCCCeeCc
Q psy17779         89 R-IHSGLRPYPCT  100 (141)
Q Consensus        89 ~-~h~~~~~~~C~  100 (141)
                      + .|.++++|.+.
T Consensus        90 ~~~H~~~~~~~~~  102 (107)
T 1wjp_A           90 VEVHNQNNMAPTS  102 (107)
T ss_dssp             HHTSCCCCCCCCC
T ss_pred             HHHcCCCCCCCCC
Confidence            7 89999998775

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.49  E-value=5.4e-14  Score=74.02  Aligned_cols=55  Identities=36%  Similarity=0.701  Sum_probs=38.0

Q ss_pred             CCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhC
Q psy17779         64 ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHF  120 (141)
Q Consensus        64 ~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  120 (141)
                      +++|.|.  .|++.|.....|..|++.|++++||.|..|++.|.....|..|+++|+
T Consensus         2 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECS--YCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCT--TTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCC--CCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            3566665  677777777777777777777777777777777777777777777765

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=6.4e-14  Score=76.89  Aligned_cols=63  Identities=25%  Similarity=0.514  Sum_probs=59.2

Q ss_pred             cCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCe
Q psy17779         33 NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPY   97 (141)
Q Consensus        33 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~   97 (141)
                      +.++++|.|..|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|++.|++++|.
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCN--YCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECS--SSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCC--CCCCccCCHHHHHHHHHHHhCCCCC
Confidence            45788999999999999999999999999999999998  8999999999999999999998874

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.47  E-value=1.3e-14  Score=88.82  Aligned_cols=81  Identities=17%  Similarity=0.279  Sum_probs=69.7

Q ss_pred             CccccCcchhccC------ChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChH
Q psy17779         37 KKFNCPHCNVAFS------NNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKD  110 (141)
Q Consensus        37 ~~~~C~~C~~~f~------~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~  110 (141)
                      +.+.|..|.+.|.      ....|..|+ .|.++++|.|.  .|++.|.....|..|++.|  ++||.|..|++.|...+
T Consensus        40 ~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~--~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~  114 (129)
T 2wbt_A           40 KRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCP--LCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTD  114 (129)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECT--TTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHH
T ss_pred             CcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECC--CCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHH
Confidence            3466777666554      566667776 58889999998  8999999999999999998  88999999999999999


Q ss_pred             HHHHHHHhhCCC
Q psy17779        111 HLKKHLRTHFPQ  122 (141)
Q Consensus       111 ~l~~H~~~h~~~  122 (141)
                      .|..|+++|++.
T Consensus       115 ~l~~H~~~h~~~  126 (129)
T 2wbt_A          115 SALDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHHHTTCC
T ss_pred             HHHHHHHHHCCc
Confidence            999999999875

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=9.8e-15  Score=81.70  Aligned_cols=69  Identities=30%  Similarity=0.582  Sum_probs=56.8

Q ss_pred             HHHHHHHhCCCCCccccCCccCcccCChHhHHHHHH-HhCCC-CCeeCccchhccCChHHHHHHHHhhCC-CCC
Q psy17779         54 LKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKR-IHSGL-RPYPCTHCGKKFGRKDHLKKHLRTHFP-QPR  124 (141)
Q Consensus        54 l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~  124 (141)
                      |.+|+++|.++++|.|.  .|++.|.....|..|++ .|.++ ++|.|..|++.|.....|..|++++++ ++|
T Consensus         3 ~~~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECY--ICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCCSCCCSEECT--TTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CCccccccCCCCCeECC--CcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            34577788888999997  89999999999999987 57664 789999999999999999999988554 444

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.45  E-value=3.5e-13  Score=78.71  Aligned_cols=73  Identities=32%  Similarity=0.639  Sum_probs=66.1

Q ss_pred             CCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc--cchhccCChHHHHHHHHhhCCCCCcccccccccccccc
Q psy17779         64 ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT--HCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYTS  138 (141)
Q Consensus        64 ~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~  138 (141)
                      .++|.|.++.|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|+++++|.|.  .|.+.|.+
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~   87 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCG--VCNRSFSR   87 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCS--SSCCBCSS
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECC--CCcCccCC
Confidence            4578897556999999999999999999999999996  6999999999999999999999999987  68888865

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.44  E-value=1.6e-13  Score=78.57  Aligned_cols=73  Identities=33%  Similarity=0.694  Sum_probs=65.5

Q ss_pred             CCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc--cchhccCChHHHHHHHHhhCCCCCcccccccccccccc
Q psy17779         64 ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT--HCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYTS  138 (141)
Q Consensus        64 ~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~  138 (141)
                      ..+|.|..+.|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+++|+++++|.|.  .|.+.|.+
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~   77 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQ--KCDRAFSR   77 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECS--SSSCEESS
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCC--CCCcccCC
Confidence            4578898444999999999999999999999999997  5999999999999999999999999976  68888865

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=7.9e-14  Score=75.59  Aligned_cols=60  Identities=32%  Similarity=0.747  Sum_probs=44.9

Q ss_pred             HhCCCCCccccCCccCcccCChHhHHHHHHH-h-CCCCCeeCccchhccCChHHHHHHHHhhCC
Q psy17779         60 IHTGERPYKCDAENCGKSFTRNEELTRHKRI-H-SGLRPYPCTHCGKKFGRKDHLKKHLRTHFP  121 (141)
Q Consensus        60 ~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  121 (141)
                      +|.++++|.|.  .|++.|.....|..|++. | .+++||.|..|++.|...+.|..|+++|++
T Consensus         4 ~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCK--VCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECT--TTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECC--CCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            46666777776  777777777777777776 5 477778888888888888888888777764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.43  E-value=1.9e-13  Score=71.88  Aligned_cols=57  Identities=33%  Similarity=0.609  Sum_probs=50.2

Q ss_pred             CCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCC
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG   93 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~   93 (141)
                      ++++|.|..|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|++.|++
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCE--FCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECS--SSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCC--CCcchhCCHHHHHHHHHHhcC
Confidence            357899999999999999999999999999999998  899999999999999998763

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=2.7e-13  Score=74.81  Aligned_cols=62  Identities=44%  Similarity=0.845  Sum_probs=57.6

Q ss_pred             hcCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCC
Q psy17779         32 KNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLR   95 (141)
Q Consensus        32 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~   95 (141)
                      .+.++++|.|..|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|++.|+++.
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCL--ECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECS--SSCCEESSHHHHHHHHHHHHSSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECC--CCCcccCCHHHHHHHHHhcCCCC
Confidence            356788999999999999999999999999999999998  89999999999999999998864

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=2.2e-13  Score=76.26  Aligned_cols=66  Identities=26%  Similarity=0.549  Sum_probs=48.0

Q ss_pred             hCCCCCccccCCccCcccCChHhHHHHHHHhCC---CCCeeCccchhccCChHHHHHHHH-hhCCCCCcccc
Q psy17779         61 HTGERPYKCDAENCGKSFTRNEELTRHKRIHSG---LRPYPCTHCGKKFGRKDHLKKHLR-THFPQPRYVSC  128 (141)
Q Consensus        61 h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~  128 (141)
                      |.++++|.|.  .|++.|.....|..|++.|++   +++|.|..|++.|.....|..|++ .|.++++....
T Consensus         2 h~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~   71 (78)
T 2d9h_A            2 SSGSSGLQCE--ICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQE   71 (78)
T ss_dssp             CCSCCCEECS--SSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSS
T ss_pred             CCCCcCeECC--CCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCccc
Confidence            5566777776  677777777777777777774   677888888888888888888874 46666665543

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.41  E-value=4.3e-13  Score=70.48  Aligned_cols=56  Identities=36%  Similarity=0.732  Sum_probs=53.2

Q ss_pred             ccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCC
Q psy17779         38 KFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLR   95 (141)
Q Consensus        38 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~   95 (141)
                      ||.|..|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|++.|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCT--YCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECS--SSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCC--CCCchhcCHHHHHHHHHHhcccC
Confidence            589999999999999999999999999999998  89999999999999999998875

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=3.2e-13  Score=74.58  Aligned_cols=61  Identities=48%  Similarity=1.019  Sum_probs=47.2

Q ss_pred             HhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhC
Q psy17779         60 IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHF  120 (141)
Q Consensus        60 ~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  120 (141)
                      .+.+.++|.|.+..|++.|.....|..|++.|.++++|.|..|++.|.....|..|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            3566777888533588888888888888888888888888888888888888888887763

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.40  E-value=3.7e-13  Score=76.70  Aligned_cols=61  Identities=25%  Similarity=0.561  Sum_probs=55.3

Q ss_pred             cCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHH-HhCCCC
Q psy17779         33 NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKR-IHSGLR   95 (141)
Q Consensus        33 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~-~h~~~~   95 (141)
                      ....++|.|++|++.|.....|..|+++|+++++|.|.  .|++.|.....|..|++ .|.+|.
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCK--YCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECT--TSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCC--CCCCEeCCHHHHHHhCcccCcCCC
Confidence            44667899999999999999999999999999999998  89999999999999974 687764

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.40  E-value=4.1e-14  Score=81.12  Aligned_cols=70  Identities=30%  Similarity=0.654  Sum_probs=62.2

Q ss_pred             CCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccccccccccccc
Q psy17779         64 ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYTS  138 (141)
Q Consensus        64 ~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~  138 (141)
                      +++|.|.  .|++.|.....|..|++.|++++||.|..|++.|.....|..|+++|++ .++.|.  .|...|.+
T Consensus         1 ek~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~--~C~~~f~~   70 (88)
T 1llm_C            1 MKPFQCR--ICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILED--KVEELLSK   70 (88)
T ss_dssp             CCCEECT--TTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHH--HHHHHHHH
T ss_pred             CCCCcCC--CCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHH--HHHHHHHH
Confidence            3688997  8999999999999999999999999999999999999999999999985 667665  67777654

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=2.8e-13  Score=79.23  Aligned_cols=68  Identities=24%  Similarity=0.441  Sum_probs=61.6

Q ss_pred             hhcCCCCccccCcchhccC-ChHHHHHHHHHhCC-CCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc
Q psy17779         31 AKNQRPKKFNCPHCNVAFS-NNGQLKGHIRIHTG-ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT  100 (141)
Q Consensus        31 ~~~~~~~~~~C~~C~~~f~-~~~~l~~h~~~h~~-~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~  100 (141)
                      ..+.++++|.|..|++.|. ....|..|++.|.+ +++|.|.  .|++.|.....|..|++.|++++|..-.
T Consensus        17 ~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~--~C~k~F~~~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           17 RAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQ--HCRKQFKSKAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             HTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCS--SSCCCCSCHHHHHHHHHHHSCSCSSCCC
T ss_pred             HHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECC--CCCCccCCHHHHHHHHHHHcCCCCCCCC
Confidence            3456788999999999999 99999999999998 8899998  8999999999999999999999986543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=8.8e-13  Score=70.02  Aligned_cols=55  Identities=38%  Similarity=0.884  Sum_probs=38.5

Q ss_pred             CccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHH-HhhCCC
Q psy17779         66 PYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHL-RTHFPQ  122 (141)
Q Consensus        66 ~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  122 (141)
                      +|.|.  .|++.|.....|..|++.|++++||.|..|++.|.....|..|+ ++|.++
T Consensus         2 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCE--VCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCT--TTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCC--CCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            56665  67777777777777777777777777777777777777777775 456543

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.38  E-value=5e-13  Score=75.65  Aligned_cols=70  Identities=33%  Similarity=0.579  Sum_probs=60.3

Q ss_pred             CccccCCccCcccCChHhHHHHHHHhCCCCCeeCcc--chhccCChHHHHHHHHhhCCCCCccccccc-ccccccc
Q psy17779         66 PYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH--CGKKFGRKDHLKKHLRTHFPQPRYVSCYPY-MYGGYTS  138 (141)
Q Consensus        66 ~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~-~~~~~~~  138 (141)
                      ||.|.+..|++.|.....|..|++.|++++||.|..  |++.|.....|..|+++|++   |.|..+. |.+.|.+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~   73 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKT   73 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCC
Confidence            467733389999999999999999999999999988  99999999999999999988   6655333 8888865

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=1.5e-12  Score=75.95  Aligned_cols=61  Identities=21%  Similarity=0.415  Sum_probs=54.8

Q ss_pred             CCCCccccCcchhcc-CChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHH-HHHhCCCCCe
Q psy17779         34 QRPKKFNCPHCNVAF-SNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRH-KRIHSGLRPY   97 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f-~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h-~~~h~~~~~~   97 (141)
                      .++++|.|..|++.| .....|..|++.| ++++|.|.  .|++.|.....|..| ++.|+++..+
T Consensus        30 ~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~--~Cgk~F~~~~~L~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           30 VDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCH--HCGKQLRSLAGMKYHVMANHNSLPSG   92 (96)
T ss_dssp             HHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCS--SSCCCCSSHHHHHHHHHHHTCCCSSC
T ss_pred             cCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECC--CCCCeeCCHHHHHHHhHHhcCCCCCC
Confidence            356789999999999 9999999999999 99999998  999999999999999 8888765433

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.35  E-value=2.5e-12  Score=74.45  Aligned_cols=55  Identities=31%  Similarity=0.494  Sum_probs=34.5

Q ss_pred             ccCcccCChHhHHHHHHH-hCCCCC--------eeCccchhccCChHHHHHHHHhhCCCCCccc
Q psy17779         73 NCGKSFTRNEELTRHKRI-HSGLRP--------YPCTHCGKKFGRKDHLKKHLRTHFPQPRYVS  127 (141)
Q Consensus        73 ~C~~~~~~~~~l~~h~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  127 (141)
                      .|++.|.....|..|++. |.++++        |.|..|++.|.....|..|+++|++++||.|
T Consensus        30 ~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           30 SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             CCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             ccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            455555555555555554 444444        6677777777777777777777777777664

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.35  E-value=1.3e-12  Score=75.67  Aligned_cols=62  Identities=29%  Similarity=0.503  Sum_probs=56.9

Q ss_pred             CccccCcchhccCChHHHHHHHHH-hCCCCC--------ccccCCccCcccCChHhHHHHHHHhCCCCCeeCc
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRI-HTGERP--------YKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT  100 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~--------~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~  100 (141)
                      ..+.|..|++.|.....|..|++. |.+.++        |.|.  .|++.|.....|..|++.|++++||.|.
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP--REGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCS--STTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCC--CCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            347899999999999999999998 888776        8897  8999999999999999999999999985

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=1.2e-12  Score=70.78  Aligned_cols=60  Identities=23%  Similarity=0.524  Sum_probs=54.4

Q ss_pred             hcCCCCccccCcchhccCChHHHHHHHHH-h-CCCCCccccCCccCcccCChHhHHHHHHHhCC
Q psy17779         32 KNQRPKKFNCPHCNVAFSNNGQLKGHIRI-H-TGERPYKCDAENCGKSFTRNEELTRHKRIHSG   93 (141)
Q Consensus        32 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~-h-~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~   93 (141)
                      .+.++++|.|..|++.|.....|..|++. | .++++|.|.  .|++.|.....|..|++.+++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCP--FCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECT--TTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECC--CCCCccCCHHHHHHHHHHHcC
Confidence            35578899999999999999999999998 6 588999998  899999999999999998875

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=2.9e-12  Score=68.00  Aligned_cols=56  Identities=46%  Similarity=0.915  Sum_probs=51.9

Q ss_pred             CccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHH-HHhCCC
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHK-RIHSGL   94 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~-~~h~~~   94 (141)
                      ++|.|..|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCG--LCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECT--TTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCC--CCCCccCCHHHHHHHHHHHcCCc
Confidence            4799999999999999999999999999999998  8999999999999997 577765

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.30  E-value=6.4e-13  Score=69.25  Aligned_cols=51  Identities=16%  Similarity=0.226  Sum_probs=45.5

Q ss_pred             cccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcc
Q psy17779         76 KSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYV  126 (141)
Q Consensus        76 ~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  126 (141)
                      +.|.....|..|++.|++++||.|..|++.|...+.|..|+++|++++||+
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            456667778889999999999999999999999999999999999999874

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.30  E-value=5.8e-12  Score=76.90  Aligned_cols=79  Identities=23%  Similarity=0.389  Sum_probs=65.2

Q ss_pred             chhhHHHHHHHH-----hhHHH-H-HhhcCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhH
Q psy17779         12 PYWSNLALEYFK-----SHEQS-M-KAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEEL   84 (141)
Q Consensus        12 ~~~~~~~~~~~~-----~~~~~-~-~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l   84 (141)
                      .+.|.+|.+.+.     ..... . ...+.++++|.|..|++.|.....|..|++.|  +++|.|.  .|++.|.....|
T Consensus        41 ~~~c~~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~--~C~k~f~~~~~l  116 (129)
T 2wbt_A           41 RLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCP--VCKKEFTSTDSA  116 (129)
T ss_dssp             HHHHHHHHHHHHCGGGTTTHHHHHHHHHHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCT--TTCCBCSSHHHH
T ss_pred             cccchhhhcccCCCcccCCHHHHHHHHHhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCC--CCCcccCCHHHH
Confidence            457888888777     22211 1 12355688999999999999999999999998  7899998  899999999999


Q ss_pred             HHHHHHhCCC
Q psy17779         85 TRHKRIHSGL   94 (141)
Q Consensus        85 ~~h~~~h~~~   94 (141)
                      ..|++.|++.
T Consensus       117 ~~H~~~h~~~  126 (129)
T 2wbt_A          117 LDHVCKKHNI  126 (129)
T ss_dssp             HHHHHHTTCC
T ss_pred             HHHHHHHCCc
Confidence            9999999886

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=3.9e-12  Score=71.04  Aligned_cols=64  Identities=23%  Similarity=0.555  Sum_probs=56.7

Q ss_pred             cCCCCccccCcchhccCChHHHHHHHHHhCC---CCCccccCCccCcccCChHhHHHHH-HHhCCCCCee
Q psy17779         33 NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTG---ERPYKCDAENCGKSFTRNEELTRHK-RIHSGLRPYP   98 (141)
Q Consensus        33 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~---~~~~~c~~~~C~~~~~~~~~l~~h~-~~h~~~~~~~   98 (141)
                      +.++++|.|.+|++.|.....|..|++.|.+   +++|.|.  .|++.|.....|..|+ ..|.++++..
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCE--FCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECT--TTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCC--CCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            4578999999999999999999999999985   7899998  8999999999999999 4677776644

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.26  E-value=2.2e-12  Score=63.49  Aligned_cols=41  Identities=44%  Similarity=0.694  Sum_probs=36.9

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVS  127 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  127 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            45678899999999999999999999999999999999876

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=6.5e-15  Score=81.33  Aligned_cols=68  Identities=26%  Similarity=0.454  Sum_probs=56.6

Q ss_pred             HHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         52 GQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        52 ~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      ..|..|++.|.++++|.|.  .|++.|.....|..       +++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         4 ~~l~~H~~~h~~~~~~~C~--~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~   71 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCS--KCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPS   71 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECS--SSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCC
T ss_pred             hhHHHHHHHhCCCCCeeCC--cccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCC
Confidence            3456677788888888887  89988888777654       67899999999999999999999999999998764

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=4.2e-12  Score=68.78  Aligned_cols=58  Identities=24%  Similarity=0.501  Sum_probs=47.3

Q ss_pred             CCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc-cchhccCChHHHHHHHHhhCCCCC
Q psy17779         63 GERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT-HCGKKFGRKDHLKKHLRTHFPQPR  124 (141)
Q Consensus        63 ~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~  124 (141)
                      +.++|.|.  .|++.|. ...|..|++. ++++||.|. .|++.|...+.|..|+++|...++
T Consensus         7 ~~~~~~C~--~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            7 GKRTQPCT--YCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCEEECS--SSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCeecc--ccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            45677886  7888888 8888888887 888888888 888888888888888888876655

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.7e-12  Score=63.18  Aligned_cols=41  Identities=27%  Similarity=0.525  Sum_probs=35.7

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVS  127 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  127 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            45678889999999999999999999999999999998875

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.1e-12  Score=63.79  Aligned_cols=43  Identities=30%  Similarity=0.532  Sum_probs=37.0

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS   44 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCS
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            3667888889999999999999999999999999999888865

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.3e-12  Score=64.15  Aligned_cols=42  Identities=29%  Similarity=0.570  Sum_probs=34.8

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCC
Confidence            566788888888888888888888888888888888888765

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.5e-12  Score=64.08  Aligned_cols=42  Identities=29%  Similarity=0.488  Sum_probs=36.4

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788889999999999999999999999999998888765

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=4.1e-12  Score=63.20  Aligned_cols=42  Identities=29%  Similarity=0.436  Sum_probs=35.6

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS   42 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            456788888999999999999999999999899888888764

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.3e-12  Score=63.74  Aligned_cols=42  Identities=31%  Similarity=0.486  Sum_probs=38.0

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|+++++|.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            677889999999999999999999999999999999998865

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.22  E-value=4e-12  Score=63.86  Aligned_cols=42  Identities=31%  Similarity=0.606  Sum_probs=34.8

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            566788888888888888888888888888888888888765

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.6e-12  Score=63.60  Aligned_cols=43  Identities=28%  Similarity=0.540  Sum_probs=36.3

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667788888899988999999999999998888888888765

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.7e-12  Score=63.55  Aligned_cols=42  Identities=31%  Similarity=0.503  Sum_probs=36.2

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSS
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788888999999999999999999999999888888765

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.22  E-value=4.4e-12  Score=63.71  Aligned_cols=43  Identities=26%  Similarity=0.512  Sum_probs=38.2

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677889999999999999999999999999999999998865

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.22  E-value=4e-12  Score=63.82  Aligned_cols=43  Identities=28%  Similarity=0.515  Sum_probs=36.7

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCT
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667788888999999999999999999999999998888765

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.22  E-value=3.7e-12  Score=63.95  Aligned_cols=42  Identities=26%  Similarity=0.525  Sum_probs=36.2

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS   44 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSS
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            567788888999999999999999999999999888888765

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4e-12  Score=63.89  Aligned_cols=42  Identities=33%  Similarity=0.541  Sum_probs=38.1

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            667889999999999999999999999999999999998875

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.4e-12  Score=63.68  Aligned_cols=42  Identities=31%  Similarity=0.579  Sum_probs=36.4

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCS
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            567788889999999999999999999999999999888765

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.9e-12  Score=63.49  Aligned_cols=42  Identities=29%  Similarity=0.551  Sum_probs=35.9

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSS
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            567788888899999999999999999998888888888765

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.8e-12  Score=63.55  Aligned_cols=42  Identities=36%  Similarity=0.581  Sum_probs=36.2

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSS
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCC
Confidence            567788888999999999999999999999999988888765

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=4.6e-12  Score=63.01  Aligned_cols=42  Identities=26%  Similarity=0.514  Sum_probs=37.7

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVS  127 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  127 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            367788999999999999999999999999999999999875

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=3.1e-11  Score=67.21  Aligned_cols=63  Identities=27%  Similarity=0.588  Sum_probs=54.3

Q ss_pred             hcCCCCccccCcchhccCChHHHHHHHH-HhCCC-CCccccCCccCcccCChHhHHHHHHHhCC-CCC
Q psy17779         32 KNQRPKKFNCPHCNVAFSNNGQLKGHIR-IHTGE-RPYKCDAENCGKSFTRNEELTRHKRIHSG-LRP   96 (141)
Q Consensus        32 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~-~~~~c~~~~C~~~~~~~~~l~~h~~~h~~-~~~   96 (141)
                      .+.++++|.|..|++.|.....|..|++ .|.+. ++|.|.  .|++.|.....|..|++.+++ +.|
T Consensus         9 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            9 THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCP--HCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECS--SSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             ccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCC--CCCCccCCHHHHHHHHHHhCCCCCC
Confidence            4567899999999999999999999997 56664 799998  899999999999999997554 444

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.2e-12  Score=63.80  Aligned_cols=42  Identities=31%  Similarity=0.528  Sum_probs=37.1

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788899999999999999999999999999999998865

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.21  E-value=2e-11  Score=67.10  Aligned_cols=57  Identities=37%  Similarity=0.867  Sum_probs=36.7

Q ss_pred             CCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCcc--chhccCChHHHHHHHHhh
Q psy17779         63 GERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH--CGKKFGRKDHLKKHLRTH  119 (141)
Q Consensus        63 ~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  119 (141)
                      ..++|.|..+.|++.|.....|..|++.|++++||.|.+  |++.|.....|..|+++|
T Consensus        14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            345566652237777777767777777777777777753  777777777777776654

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.7e-12  Score=63.59  Aligned_cols=43  Identities=30%  Similarity=0.551  Sum_probs=38.2

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667889999999999999999999999999999999998865

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.4e-12  Score=63.65  Aligned_cols=42  Identities=31%  Similarity=0.574  Sum_probs=35.4

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS   44 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            567788888888888888888888888888888888888765

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=4.1e-12  Score=63.81  Aligned_cols=42  Identities=33%  Similarity=0.553  Sum_probs=37.7

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            667888999999999999999999999999999999998865

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.6e-12  Score=63.24  Aligned_cols=41  Identities=32%  Similarity=0.610  Sum_probs=36.8

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVS  127 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  127 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            56788899999999999999999999999999999999865

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.6e-12  Score=63.60  Aligned_cols=43  Identities=26%  Similarity=0.512  Sum_probs=37.2

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            3667888899999999999999999999999999999998865

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.4e-12  Score=63.71  Aligned_cols=43  Identities=33%  Similarity=0.594  Sum_probs=38.7

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677889999999999999999999999999999999998865

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.8e-12  Score=63.49  Aligned_cols=42  Identities=31%  Similarity=0.476  Sum_probs=34.1

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCC
Confidence            566788888888888888888888888888888888887764

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.21  E-value=4.6e-12  Score=63.65  Aligned_cols=42  Identities=26%  Similarity=0.543  Sum_probs=34.8

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            566788888888888888888888888888888888888765

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.1e-12  Score=62.77  Aligned_cols=42  Identities=33%  Similarity=0.554  Sum_probs=37.5

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVS  127 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  127 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            366788999999999999999999999999999999999875

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.2e-12  Score=63.41  Aligned_cols=42  Identities=24%  Similarity=0.502  Sum_probs=34.0

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            566778888888888888888888888888888888887764

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=1.7e-11  Score=67.54  Aligned_cols=61  Identities=38%  Similarity=0.865  Sum_probs=55.2

Q ss_pred             HhhcCCCCccccC--cchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhC
Q psy17779         30 KAKNQRPKKFNCP--HCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHS   92 (141)
Q Consensus        30 ~~~~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~   92 (141)
                      .....++++|.|+  .|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|++.|+
T Consensus        11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             SCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHTTCC
T ss_pred             hccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECC--CCCchhCCHHHHHHHHHhcC
Confidence            3446678999997  5999999999999999999999999998  89999999999999998774

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=5.6e-12  Score=63.28  Aligned_cols=42  Identities=26%  Similarity=0.440  Sum_probs=36.2

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTT
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788888999999999999999999999999998888765

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.1e-12  Score=63.46  Aligned_cols=42  Identities=33%  Similarity=0.615  Sum_probs=36.0

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCC
Confidence            567788888899999999999999999999889888888765

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.21  E-value=5e-12  Score=62.17  Aligned_cols=41  Identities=27%  Similarity=0.492  Sum_probs=36.8

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVS  127 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  127 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            45678899999999999999999999999999999999875

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.9e-12  Score=63.48  Aligned_cols=43  Identities=28%  Similarity=0.501  Sum_probs=38.3

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            3667889999999999999999999999999999999998865

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.8e-12  Score=63.55  Aligned_cols=42  Identities=29%  Similarity=0.547  Sum_probs=36.1

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCC
Confidence            567788888999999999999999999999889888888765

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.21  E-value=4.4e-12  Score=63.68  Aligned_cols=42  Identities=17%  Similarity=0.328  Sum_probs=34.2

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence            566788888888888888888888888888888888887764

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.3e-12  Score=63.09  Aligned_cols=42  Identities=36%  Similarity=0.619  Sum_probs=36.2

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSS
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCC
Confidence            567788888999999999999999999999999998888765

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.4e-12  Score=63.09  Aligned_cols=42  Identities=33%  Similarity=0.596  Sum_probs=37.1

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788999999999999999999999999999999998865

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.7e-12  Score=63.56  Aligned_cols=43  Identities=28%  Similarity=0.568  Sum_probs=37.2

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3567788899999999999999999999999999999998865

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.8e-12  Score=63.93  Aligned_cols=43  Identities=33%  Similarity=0.544  Sum_probs=36.4

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            3567788888899999999999999999998888888888765

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5e-12  Score=63.47  Aligned_cols=42  Identities=26%  Similarity=0.492  Sum_probs=34.7

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCC
Confidence            566788888888888888888888888888888888888764

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.8e-12  Score=63.54  Aligned_cols=42  Identities=26%  Similarity=0.466  Sum_probs=36.8

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788889999999999999999999999999999998864

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.5e-12  Score=63.64  Aligned_cols=42  Identities=26%  Similarity=0.489  Sum_probs=35.5

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            567788888888888888888888888888888888888765

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7.8e-12  Score=62.70  Aligned_cols=43  Identities=33%  Similarity=0.546  Sum_probs=36.3

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            3667788888899998999999988999998888888888765

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.8e-12  Score=62.98  Aligned_cols=43  Identities=28%  Similarity=0.567  Sum_probs=37.0

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3677888889999999999999999999999999999888765

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.1e-12  Score=63.19  Aligned_cols=42  Identities=33%  Similarity=0.577  Sum_probs=34.4

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS   44 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCC
Confidence            566788888888888888888888888888888888887764

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.20  E-value=6.4e-12  Score=63.04  Aligned_cols=42  Identities=31%  Similarity=0.522  Sum_probs=36.1

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS   44 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTT
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCC
Confidence            567788888999999999999999999999889888888765

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.3e-12  Score=63.76  Aligned_cols=43  Identities=42%  Similarity=0.801  Sum_probs=36.4

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS   44 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCS
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCC
Confidence            3667788888899999999999999999998888888888764

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.3e-12  Score=63.41  Aligned_cols=43  Identities=30%  Similarity=0.573  Sum_probs=38.5

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            3677889999999999999999999999999999999998864

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.4e-12  Score=63.31  Aligned_cols=43  Identities=26%  Similarity=0.419  Sum_probs=35.3

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            3566788888888888888888888888888888888888764

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3e-12  Score=63.01  Aligned_cols=41  Identities=27%  Similarity=0.553  Sum_probs=36.8

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVS  127 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  127 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56678899999999999999999999999999999999864

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.1e-12  Score=63.44  Aligned_cols=42  Identities=29%  Similarity=0.554  Sum_probs=36.8

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            567788899999999999999999999999999999998765

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.8e-12  Score=62.93  Aligned_cols=42  Identities=29%  Similarity=0.569  Sum_probs=33.8

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS   44 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            566778888888888888888888888888888888887764

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.1e-12  Score=63.12  Aligned_cols=43  Identities=33%  Similarity=0.593  Sum_probs=38.0

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            3667888999999999999999999999999999999998865

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=3.9e-12  Score=62.64  Aligned_cols=41  Identities=34%  Similarity=0.657  Sum_probs=36.5

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVS  127 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  127 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            56678899999999999999999999999999999999864

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.8e-12  Score=62.93  Aligned_cols=43  Identities=33%  Similarity=0.519  Sum_probs=36.9

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3567788889999999999999999999999999999888765

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=7.7e-12  Score=62.78  Aligned_cols=42  Identities=26%  Similarity=0.458  Sum_probs=35.9

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS   44 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCC
Confidence            566788888999999999999999999999889888888765

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.4e-12  Score=62.99  Aligned_cols=42  Identities=36%  Similarity=0.604  Sum_probs=36.6

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVS  127 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  127 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            366778889999999999999999999999999999998875

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.2e-12  Score=63.12  Aligned_cols=42  Identities=40%  Similarity=0.648  Sum_probs=37.4

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVS  127 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  127 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            367788999999999999999999999999999999999875

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6e-12  Score=63.15  Aligned_cols=43  Identities=28%  Similarity=0.494  Sum_probs=38.0

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667888999999999999999999999999999999998864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.5e-12  Score=63.29  Aligned_cols=43  Identities=30%  Similarity=0.556  Sum_probs=36.9

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|+++++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667788889999999999999999999999999999988764

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.9e-12  Score=63.24  Aligned_cols=42  Identities=29%  Similarity=0.520  Sum_probs=33.4

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS   44 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            456777888888888888888888888888888888887764

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.6e-12  Score=63.06  Aligned_cols=43  Identities=30%  Similarity=0.607  Sum_probs=37.0

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3667788899999999999999999999999999999988764

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=6.5e-12  Score=63.01  Aligned_cols=42  Identities=26%  Similarity=0.406  Sum_probs=36.3

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS   44 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCS
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788889999999999999999999999999999888764

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=8.3e-12  Score=62.64  Aligned_cols=42  Identities=21%  Similarity=0.234  Sum_probs=36.1

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPS   44 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTT
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788888999999999999999999999999998888764

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=6.5e-12  Score=63.07  Aligned_cols=43  Identities=26%  Similarity=0.422  Sum_probs=36.2

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3567788888899988999999988999998888888888764

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.4e-12  Score=62.86  Aligned_cols=42  Identities=21%  Similarity=0.385  Sum_probs=36.7

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            567788899999999999999999999999999999998764

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.1e-12  Score=63.13  Aligned_cols=42  Identities=29%  Similarity=0.546  Sum_probs=37.4

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            667888999999999999999999999999999999998865

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.19  E-value=9.2e-12  Score=62.51  Aligned_cols=42  Identities=29%  Similarity=0.488  Sum_probs=36.1

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS   44 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            566788888999999999999999999999999998888764

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=7.1e-12  Score=62.29  Aligned_cols=42  Identities=24%  Similarity=0.437  Sum_probs=37.6

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVS  127 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  127 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            366788999999999999999999999999999999999875

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.6e-12  Score=63.32  Aligned_cols=43  Identities=28%  Similarity=0.498  Sum_probs=37.2

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3567788899999999999999999999999999999998764

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.9e-12  Score=63.16  Aligned_cols=43  Identities=30%  Similarity=0.576  Sum_probs=38.1

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3667888999999999999999999999999999999998864

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.7e-12  Score=63.21  Aligned_cols=42  Identities=29%  Similarity=0.588  Sum_probs=33.5

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            566778888888888888888888888888888888887754

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.6e-12  Score=63.29  Aligned_cols=42  Identities=26%  Similarity=0.499  Sum_probs=36.7

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            667788899999999999999999999999999999988764

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.1e-12  Score=62.89  Aligned_cols=42  Identities=36%  Similarity=0.596  Sum_probs=36.4

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCC
Confidence            567788889999999999999999999999999999888765

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6e-12  Score=63.24  Aligned_cols=42  Identities=29%  Similarity=0.506  Sum_probs=37.0

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            567788899999999999999999999999999999998865

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.4e-12  Score=63.69  Aligned_cols=42  Identities=31%  Similarity=0.593  Sum_probs=36.3

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            567788888999999999999999999999999888888765

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.5e-12  Score=63.04  Aligned_cols=42  Identities=26%  Similarity=0.502  Sum_probs=36.4

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCS
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCC
Confidence            567788889999999999999999999999999999888765

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=5.4e-12  Score=63.36  Aligned_cols=42  Identities=29%  Similarity=0.564  Sum_probs=36.1

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            567788888999999999999999999999999998888764

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=9.3e-12  Score=61.92  Aligned_cols=41  Identities=39%  Similarity=0.518  Sum_probs=37.1

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVS  127 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  127 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            67788999999999999999999999999999999999864

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.9e-12  Score=63.21  Aligned_cols=43  Identities=26%  Similarity=0.563  Sum_probs=36.8

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3567788889999999999999999999999999999988765

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.2e-12  Score=62.82  Aligned_cols=42  Identities=29%  Similarity=0.502  Sum_probs=37.9

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVS  127 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  127 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            367788999999999999999999999999999999999875

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.8e-12  Score=63.02  Aligned_cols=42  Identities=31%  Similarity=0.564  Sum_probs=32.8

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS   44 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            456677788888888888888888888888888888887754

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.5e-12  Score=62.83  Aligned_cols=42  Identities=26%  Similarity=0.484  Sum_probs=36.9

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            456788899999999999999999999999999999998864

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8e-12  Score=62.68  Aligned_cols=43  Identities=26%  Similarity=0.508  Sum_probs=38.0

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667888999999999999999999999999999999998864

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.1e-11  Score=61.63  Aligned_cols=41  Identities=22%  Similarity=0.291  Sum_probs=35.6

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVS  127 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  127 (141)
                      |++.|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            45678888999999999999999999999999999998875

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=9.9e-12  Score=62.38  Aligned_cols=42  Identities=31%  Similarity=0.520  Sum_probs=35.1

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS   44 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            456788888888888888888888888888888888888764

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=9.6e-12  Score=62.43  Aligned_cols=42  Identities=21%  Similarity=0.286  Sum_probs=37.6

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCC-CCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFP-QPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|+++|++ ++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56788899999999999999999999999999999 9998763

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.15  E-value=5.7e-11  Score=65.20  Aligned_cols=59  Identities=39%  Similarity=0.906  Sum_probs=52.4

Q ss_pred             cCCCCccccCc--chhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHh
Q psy17779         33 NQRPKKFNCPH--CNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH   91 (141)
Q Consensus        33 ~~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h   91 (141)
                      ....++|.|..  |++.|.....|..|++.|.++++|.|..+.|++.|.....|..|++.|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34667899998  999999999999999999999999996335999999999999998764

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.5e-12  Score=63.04  Aligned_cols=43  Identities=28%  Similarity=0.486  Sum_probs=38.1

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++.|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677889999999999999999999999999999999998864

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.6e-11  Score=61.82  Aligned_cols=42  Identities=29%  Similarity=0.525  Sum_probs=34.8

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHH-hhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLR-THFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~  128 (141)
                      |++.|++++||.|..|++.|...+.|..|++ +|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~   45 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS   45 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCC
Confidence            5667888888888888888888888888888 88888887754

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=7e-12  Score=62.96  Aligned_cols=42  Identities=40%  Similarity=0.735  Sum_probs=35.5

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |++.|.+++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788888888888888888888888888888888888764

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=3.8e-11  Score=58.64  Aligned_cols=39  Identities=36%  Similarity=0.540  Sum_probs=35.0

Q ss_pred             HHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccc
Q psy17779         89 RIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVS  127 (141)
Q Consensus        89 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  127 (141)
                      +.|++++||.|..|++.|.....|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            357889999999999999999999999999999999875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=5.5e-11  Score=64.27  Aligned_cols=60  Identities=18%  Similarity=0.344  Sum_probs=53.2

Q ss_pred             CCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCC
Q psy17779         34 QRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP   96 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~   96 (141)
                      -+.++|.|..|++.|. ...|..|++. .++++|.|.. .|++.|.....|..|++.|...++
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~-~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPN-QCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTT-CCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCc-ccCcccccHHHHHHHHHhhcccCc
Confidence            4678899999999999 9999999998 8999999941 699999999999999998877655

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=4.4e-11  Score=59.99  Aligned_cols=41  Identities=24%  Similarity=0.350  Sum_probs=34.9

Q ss_pred             HHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         88 KRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        88 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      ++.|++++||.|..|++.|.....|..|+++|++++||.|-
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            45678888999999999999999999999999998888764

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.2e-11  Score=59.97  Aligned_cols=44  Identities=43%  Similarity=0.826  Sum_probs=29.6

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCN--ECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCT--TTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECC--CCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            44556666677765  677777777777777777777777776654

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.6e-11  Score=59.81  Aligned_cols=44  Identities=41%  Similarity=0.716  Sum_probs=28.3

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCK--ECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBT--TTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECC--CCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            44556666666665  666666666666666666666666666654

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.1e-11  Score=59.67  Aligned_cols=44  Identities=39%  Similarity=0.693  Sum_probs=28.7

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCD--ICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCS--SSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCC--cCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44556666666665  666666666666666666666666666654

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.08  E-value=5.1e-11  Score=59.69  Aligned_cols=44  Identities=36%  Similarity=0.791  Sum_probs=26.9

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECK--ECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCS--SSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECC--CCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34455566666665  566666666666666666666666666544

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.2e-11  Score=60.18  Aligned_cols=41  Identities=37%  Similarity=0.640  Sum_probs=36.1

Q ss_pred             HHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         88 KRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        88 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .+.|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            35688899999999999999999999999999999998764

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=3.8e-11  Score=59.58  Aligned_cols=42  Identities=26%  Similarity=0.544  Sum_probs=22.6

Q ss_pred             HHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        59 ~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      +.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 ~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            3 SGSSGEKPFGCS--CCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCSSCCCEECS--SSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCcCCCcCccCC--CCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            344555555554  555555555555555555555555555443

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.07  E-value=4.9e-11  Score=59.74  Aligned_cols=44  Identities=25%  Similarity=0.519  Sum_probs=30.6

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCR--ECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCS--SSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECC--CCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            45556666777776  677777777777777777777777777654

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.07  E-value=1.7e-10  Score=59.87  Aligned_cols=46  Identities=35%  Similarity=0.579  Sum_probs=28.5

Q ss_pred             hCCCCCeeCccchhccCChHHHHHHHH-hhCCCCCcccccccccccccc
Q psy17779         91 HSGLRPYPCTHCGKKFGRKDHLKKHLR-THFPQPRYVSCYPYMYGGYTS  138 (141)
Q Consensus        91 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~~~~~~~~~~~  138 (141)
                      |.+++||.|..|++.|.....|..|++ +|.+++||.|.  .|.++|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~--~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ--VWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS--SSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCC--CCCCCCCC
Confidence            455566666666666666666666665 56666666655  46666654

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.2e-11  Score=59.97  Aligned_cols=44  Identities=43%  Similarity=0.762  Sum_probs=26.6

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCN--ECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECS--SSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCC--CCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34455556666665  566666666666666666666666666554

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=6.3e-11  Score=59.30  Aligned_cols=44  Identities=41%  Similarity=0.690  Sum_probs=28.3

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCS--DCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCS--SSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCC--ccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44556666666665  666666666666666666666666666654

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.07  E-value=4.8e-11  Score=59.78  Aligned_cols=44  Identities=36%  Similarity=0.735  Sum_probs=26.3

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCV--ECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCS--SSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccC--ccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34455556666665  566666666666666666666666666554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.6e-11  Score=59.85  Aligned_cols=41  Identities=27%  Similarity=0.434  Sum_probs=34.7

Q ss_pred             HHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         88 KRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        88 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      ++.|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCC
Confidence            45678888899999999999999999998888888888765

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.07  E-value=9.7e-11  Score=57.84  Aligned_cols=39  Identities=23%  Similarity=0.370  Sum_probs=33.3

Q ss_pred             HhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         90 IHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        90 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++++||.|..|++.|...+.|..|+++|++++||.|.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            577888899999999999999999999889888888764

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.6e-11  Score=59.81  Aligned_cols=44  Identities=45%  Similarity=0.880  Sum_probs=26.9

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCN--ECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEET--TTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECC--CcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34455566666665  566666666666666666666666666554

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5e-11  Score=59.72  Aligned_cols=44  Identities=41%  Similarity=0.761  Sum_probs=28.6

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECS--ICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECS--SSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCC--CCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44556666666665  666666666666666666666666666654

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5.9e-11  Score=59.45  Aligned_cols=44  Identities=36%  Similarity=0.654  Sum_probs=27.9

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCS--ECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCS--SSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCC--ccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34456666666665  666666666666666666666666666654

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.5e-11  Score=59.87  Aligned_cols=44  Identities=41%  Similarity=0.779  Sum_probs=28.0

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECS--VCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECS--SSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCC--CcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            44556666666665  666666666666666666666666666554

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.8e-11  Score=59.49  Aligned_cols=44  Identities=32%  Similarity=0.631  Sum_probs=28.9

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 h~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCE--DCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCS--SSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCc--ccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34456666666665  677777776677777666766667666654

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.7e-11  Score=59.49  Aligned_cols=44  Identities=36%  Similarity=0.730  Sum_probs=27.8

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCI--DCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCT--TTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECC--CCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34455666666665  666666666666666666666666666554

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=6.6e-11  Score=59.25  Aligned_cols=44  Identities=36%  Similarity=0.695  Sum_probs=28.0

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICA--ECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECS--SSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECC--CCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44556666666665  666666666666666666666666666554

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.4e-11  Score=59.96  Aligned_cols=44  Identities=34%  Similarity=0.684  Sum_probs=27.9

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECT--ECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECS--SSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECC--CCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44456666666665  666666666666666666666666666554

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.06  E-value=4.3e-11  Score=59.91  Aligned_cols=44  Identities=32%  Similarity=0.646  Sum_probs=29.9

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCS--QCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECS--SSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECC--CCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44556666677775  677777777777777777777777776654

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.7e-11  Score=59.45  Aligned_cols=44  Identities=41%  Similarity=0.682  Sum_probs=28.1

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECR--ECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCT--TTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCC--CCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44456666666665  666666666666666666666666666554

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.2e-11  Score=59.98  Aligned_cols=44  Identities=45%  Similarity=0.835  Sum_probs=28.0

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCN--ECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECS--SSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECC--CCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            44456666666665  666666666666666666666666666654

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.1e-11  Score=59.35  Aligned_cols=44  Identities=43%  Similarity=0.868  Sum_probs=29.4

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCN--ECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCT--TTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCC--CCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44556666667665  677777777777777777777777766654

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.5e-11  Score=59.24  Aligned_cols=44  Identities=43%  Similarity=0.792  Sum_probs=29.3

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCD--YCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECS--SSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECC--CCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44556666666665  677777777777777766777777766654

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.9e-11  Score=59.72  Aligned_cols=44  Identities=45%  Similarity=0.814  Sum_probs=26.2

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCN--ECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECS--SSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCC--cCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            34455555666665  566666666666666666666666666554

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.05  E-value=5.1e-11  Score=59.66  Aligned_cols=44  Identities=41%  Similarity=0.808  Sum_probs=27.2

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCN--ECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECS--SSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCC--CCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44455566666665  566666666666666666666666666554

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.8e-11  Score=59.78  Aligned_cols=44  Identities=36%  Similarity=0.670  Sum_probs=27.2

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCN--ECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECS--SSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECC--CCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44455666666665  566666666666666666666666666554

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.3e-11  Score=59.61  Aligned_cols=44  Identities=39%  Similarity=0.745  Sum_probs=25.9

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECH--ECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECS--SSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCC--CCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            34445555666665  566666666666666666666666666544

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.05  E-value=1.7e-10  Score=55.70  Aligned_cols=37  Identities=22%  Similarity=0.449  Sum_probs=33.0

Q ss_pred             hCCCCCeeCccchhccCChHHHHHHHHhhCCCCCccc
Q psy17779         91 HSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVS  127 (141)
Q Consensus        91 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~  127 (141)
                      |++++||.|..|++.|...+.|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            5678999999999999999999999999999999874

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=5.5e-11  Score=59.54  Aligned_cols=44  Identities=36%  Similarity=0.716  Sum_probs=27.6

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCE--ECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECS--SSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCC--CccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34455666666665  666666666666666666666666666554

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.4e-11  Score=59.30  Aligned_cols=44  Identities=43%  Similarity=0.867  Sum_probs=26.1

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCS--ECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECS--SSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECC--CCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            34455555666665  566666666666666666666666666544

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.5e-11  Score=59.32  Aligned_cols=43  Identities=44%  Similarity=0.796  Sum_probs=25.2

Q ss_pred             HHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         58 IRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        58 ~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      ++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         4 ~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            4 GSSGTGEKPYKCM--ECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCSSSBT--TTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CcCCCCCCCcCCC--CCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3445555566665  566666666666666666666666666544

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5e-11  Score=59.69  Aligned_cols=44  Identities=45%  Similarity=0.816  Sum_probs=27.6

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCH--ECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECT--TTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECC--CCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34455666666665  566666666666666666666666666554

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.04  E-value=6e-11  Score=59.36  Aligned_cols=44  Identities=41%  Similarity=0.740  Sum_probs=29.5

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCK--ECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECS--SSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECC--ccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44556666677765  677777777777777777777777766654

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=5e-11  Score=59.73  Aligned_cols=44  Identities=27%  Similarity=0.571  Sum_probs=28.4

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCH--ECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECS--SSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECC--cCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44556666666665  666666666666666666666666666654

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.8e-11  Score=59.78  Aligned_cols=44  Identities=41%  Similarity=0.754  Sum_probs=26.1

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICT--VCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECT--TTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCC--CCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34455555666665  566666666666666666666666666544

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=1.7e-10  Score=57.46  Aligned_cols=39  Identities=36%  Similarity=0.629  Sum_probs=31.6

Q ss_pred             HhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         90 IHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        90 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .|++++||.|..|++.|...+.|..|+++|+++++|.|.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~   42 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGP   42 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCc
Confidence            467788888888888888888888888888888888765

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=7.2e-11  Score=59.11  Aligned_cols=43  Identities=37%  Similarity=0.710  Sum_probs=26.3

Q ss_pred             HHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         58 IRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        58 ~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      ++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         4 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            4 GSSGSGEKPFKCE--ECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCSEECS--SSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCcCCC--CCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4455556666665  566666666666666666666666666554

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.3e-11  Score=59.64  Aligned_cols=44  Identities=32%  Similarity=0.569  Sum_probs=26.9

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCN--ECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECS--SSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEcc--ccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44455566666665  566666666666666666666666666554

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.1e-11  Score=59.14  Aligned_cols=44  Identities=39%  Similarity=0.819  Sum_probs=28.9

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCE--ECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEET--TTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCC--CCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666665  666666666666666666666666666654

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.03  E-value=2.2e-10  Score=59.41  Aligned_cols=43  Identities=33%  Similarity=0.705  Sum_probs=21.2

Q ss_pred             CCCCccccCCccCcccCChHhHHHHHH-HhCCCCCeeCccchhccC
Q psy17779         63 GERPYKCDAENCGKSFTRNEELTRHKR-IHSGLRPYPCTHCGKKFG  107 (141)
Q Consensus        63 ~~~~~~c~~~~C~~~~~~~~~l~~h~~-~h~~~~~~~C~~C~~~f~  107 (141)
                      ++++|.|.  .|++.|.....|..|++ .|++++||.|..|++.|.
T Consensus         9 ~~k~~~C~--~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            9 VGKPYICQ--SCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             SSCCEECS--SSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCeECC--CCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            34444444  45555555555555543 455555555555555443

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.2e-12  Score=72.00  Aligned_cols=62  Identities=16%  Similarity=0.364  Sum_probs=55.7

Q ss_pred             hcCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         32 KNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        32 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      .+.++++|.|..|++.|.....|..       +++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus        12 ~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~--~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           12 IHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCE--KCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCH--HHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCC--CCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            3567889999999999999887765       6789998  899999999999999999999999999876

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=8.1e-11  Score=58.91  Aligned_cols=43  Identities=21%  Similarity=0.370  Sum_probs=25.4

Q ss_pred             HHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         58 IRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        58 ~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      ++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         4 ~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            4 GSSGSREKSHQCR--ECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCEECT--TTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ccccCCCCCEEcc--ccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3445555566665  566666666666666666666666666544

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=5.8e-11  Score=59.43  Aligned_cols=44  Identities=30%  Similarity=0.481  Sum_probs=28.3

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCD--ECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECT--TTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECC--CcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44456666666665  666666666666666666666666666554

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.3e-11  Score=59.64  Aligned_cols=40  Identities=30%  Similarity=0.559  Sum_probs=30.0

Q ss_pred             HHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         89 RIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        89 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      +.|++++||.|..|++.|.....|..|+++|++++||.|.
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS   44 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4567777777777777777777777777777777777654

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.6e-11  Score=59.21  Aligned_cols=44  Identities=32%  Similarity=0.521  Sum_probs=25.3

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCT--ECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECS--SSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCC--CCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555556655  566666666666666666666666665544

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.02  E-value=8.7e-11  Score=58.83  Aligned_cols=43  Identities=33%  Similarity=0.567  Sum_probs=26.0

Q ss_pred             HHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         58 IRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        58 ~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      ++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         4 ~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            4 GSSGAGVNPYKCS--QCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCSEECS--SSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3445556666665  566666666666666666666666666554

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5.9e-11  Score=59.43  Aligned_cols=44  Identities=36%  Similarity=0.740  Sum_probs=25.6

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCE--KCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEET--TTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECC--CCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            34445555566665  566666666666666666666666666544

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7.4e-11  Score=59.05  Aligned_cols=43  Identities=35%  Similarity=0.754  Sum_probs=23.5

Q ss_pred             HHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         58 IRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        58 ~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      ++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         4 ~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            4 GSSGSGEKPYGCN--ECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCEEET--TTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCccCCCcCeECC--CCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            3445555555554  555555555555555555555555555543

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5.3e-11  Score=59.61  Aligned_cols=44  Identities=45%  Similarity=0.868  Sum_probs=26.1

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCN--ECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECS--SSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECC--cCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34455555666665  566666666666666666666666666544

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=9.9e-11  Score=58.58  Aligned_cols=43  Identities=40%  Similarity=0.795  Sum_probs=26.0

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCcc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH  101 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~  101 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTGEKPYRCA--ECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSCCCSEECS--SSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCeECC--CCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            44455566666665  56666666666666666666666666654

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5.2e-11  Score=59.63  Aligned_cols=44  Identities=39%  Similarity=0.778  Sum_probs=28.7

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCG--ECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECT--TTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44556666666665  666666666666666666666666666654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=3e-10  Score=61.33  Aligned_cols=39  Identities=31%  Similarity=0.442  Sum_probs=33.4

Q ss_pred             hCCCCCeeCcc--chhccCChHHHHHHH-HhhCCCCCccccc
Q psy17779         91 HSGLRPYPCTH--CGKKFGRKDHLKKHL-RTHFPQPRYVSCY  129 (141)
Q Consensus        91 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~~~~  129 (141)
                      .+++|||.|..  |+++|...+.|..|+ ++|+++|||++-+
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            56889999975  999999999999996 6899999998765

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.3e-10  Score=58.30  Aligned_cols=44  Identities=39%  Similarity=0.706  Sum_probs=27.4

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHH-HhCCCCCeeCccc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKR-IHSGLRPYPCTHC  102 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~-~h~~~~~~~C~~C  102 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++ .|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECI--ECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCS--SSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECC--ccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            34455666666665  56666666666666666 6666666666554

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=9.7e-11  Score=58.65  Aligned_cols=42  Identities=36%  Similarity=0.725  Sum_probs=23.2

Q ss_pred             HHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        59 ~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      +.|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         5 ~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            5 SSGSGEKPYKCV--ECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCSCCSEECS--SSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCeECc--ccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            345555555554  555555555555555555555555555544

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=1.7e-10  Score=54.85  Aligned_cols=36  Identities=31%  Similarity=0.614  Sum_probs=32.5

Q ss_pred             HHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCC
Q psy17779         89 RIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPR  124 (141)
Q Consensus        89 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  124 (141)
                      +.|++++||.|..|++.|...+.|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            468889999999999999999999999999998875

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.9e-10  Score=57.53  Aligned_cols=42  Identities=40%  Similarity=0.800  Sum_probs=22.2

Q ss_pred             HHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCcc
Q psy17779         58 IRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTH  101 (141)
Q Consensus        58 ~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~  101 (141)
                      ++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.+
T Consensus         4 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            4 GSSGSGEKPFKCK--ECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCSEECS--SSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCEECC--cCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3344555555554  55555555555555555555555555543

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3e-10  Score=57.24  Aligned_cols=41  Identities=32%  Similarity=0.605  Sum_probs=34.2

Q ss_pred             HHHhCCCCCeeCc--cchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         88 KRIHSGLRPYPCT--HCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        88 ~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .+.|++++||.|.  .|++.|.....|..|+++|++++||.|.
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   46 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS   46 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4567888888887  7888898888888898888888888764

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.2e-10  Score=55.02  Aligned_cols=38  Identities=29%  Similarity=0.698  Sum_probs=19.1

Q ss_pred             HhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         60 IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        60 ~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      .|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         4 ~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            4 GSSGEKPYSCA--ECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SSCSCCSCBCT--TTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CcCCCCCeECC--CCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34444455554  455555555555555555555555544

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.94  E-value=7.5e-10  Score=51.81  Aligned_cols=34  Identities=32%  Similarity=0.519  Sum_probs=31.0

Q ss_pred             hCCCCCeeCccchhccCChHHHHHHHHhhCCCCC
Q psy17779         91 HSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPR  124 (141)
Q Consensus        91 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  124 (141)
                      |++++||.|..|++.|...+.|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            6788999999999999999999999999998875

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.92  E-value=8.6e-10  Score=51.67  Aligned_cols=34  Identities=32%  Similarity=0.607  Sum_probs=31.0

Q ss_pred             hCCCCCeeCccchhccCChHHHHHHHHhhCCCCC
Q psy17779         91 HSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPR  124 (141)
Q Consensus        91 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  124 (141)
                      |++++||.|..|++.|...+.|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            6788999999999999999999999999998875

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.92  E-value=1.8e-10  Score=59.70  Aligned_cols=51  Identities=16%  Similarity=0.204  Sum_probs=44.8

Q ss_pred             hhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCe
Q psy17779         45 NVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPY   97 (141)
Q Consensus        45 ~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~   97 (141)
                      ++.|.+...|..|++.|.++++|.|.  .|++.|.....|..|++.|++++||
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCP--ICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECT--TTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCC--CCCcccCCHHHHHHHHHHhccCCCC
Confidence            35677777788899999999999997  8999999999999999999999886

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.92  E-value=1e-09  Score=55.37  Aligned_cols=38  Identities=29%  Similarity=0.456  Sum_probs=27.8

Q ss_pred             hCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         91 HSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        91 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      +.++++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSG   44 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCC
Confidence            55667777777777777777777777777777777655

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.92  E-value=3.9e-10  Score=55.17  Aligned_cols=38  Identities=39%  Similarity=0.858  Sum_probs=19.0

Q ss_pred             HhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         60 IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        60 ~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      .|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         4 ~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            4 GSSGENPYECS--ECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             SSSSCCSEECS--SSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCccCC--CcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            34444455554  455555555555555555555555444

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.9e-10  Score=55.96  Aligned_cols=42  Identities=38%  Similarity=0.871  Sum_probs=24.9

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT  100 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~  100 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCN--ECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCC--SSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            34455555666665  5666666666666666666666666554

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.2e-10  Score=56.21  Aligned_cols=41  Identities=49%  Similarity=0.920  Sum_probs=21.9

Q ss_pred             HHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc
Q psy17779         58 IRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT  100 (141)
Q Consensus        58 ~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~  100 (141)
                      ++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         4 ~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            4 GSSGTGEKPYKCN--ECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCBCS--SSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CcCCCCCcCeECC--CCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            3344555555554  5555555555555555555555555553

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=5.3e-10  Score=55.82  Aligned_cols=42  Identities=43%  Similarity=0.836  Sum_probs=23.0

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT  100 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~  100 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECS--DCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCS--SSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCC--CCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            33445555555554  5555555555555555555555555554

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.91  E-value=3.8e-10  Score=56.40  Aligned_cols=39  Identities=44%  Similarity=0.905  Sum_probs=18.9

Q ss_pred             HHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        59 ~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      +.|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         5 ~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emj_A            5 SSGTGEKPFECA--ECGKSFSISSQLATHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSEECS--SSSCEESSHHHHHHHHHHHTTSCSSSS
T ss_pred             CCCCCCCCEECC--CCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            344444444444  455555555555555545555444444

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.5e-10  Score=56.09  Aligned_cols=41  Identities=41%  Similarity=0.767  Sum_probs=21.6

Q ss_pred             HHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc
Q psy17779         58 IRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT  100 (141)
Q Consensus        58 ~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~  100 (141)
                      ++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         4 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            4 GSSGTGENPFICS--ECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCSCCSCBCT--TTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCEECC--ccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3344455555554  4555555555555555555555555553

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.91  E-value=4.8e-10  Score=53.27  Aligned_cols=36  Identities=33%  Similarity=0.804  Sum_probs=31.8

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCC
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQ  122 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  122 (141)
                      |++.|++++||.|..|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            567788999999999999999999999999998764

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.6e-10  Score=56.08  Aligned_cols=41  Identities=49%  Similarity=0.925  Sum_probs=21.7

Q ss_pred             HHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc
Q psy17779         58 IRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT  100 (141)
Q Consensus        58 ~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~  100 (141)
                      ++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         4 ~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            4 GSSGTGEKPYKCN--ECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCTTCCS--SSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CcCCCCCcCeECC--CCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            3344555555554  4555555555555555555555555553

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.6e-10  Score=55.79  Aligned_cols=42  Identities=38%  Similarity=0.852  Sum_probs=23.9

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT  100 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~  100 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCE--ECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCS--SSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCC--CCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            34445555555554  5666666666666666566666655554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=4.3e-10  Score=56.21  Aligned_cols=39  Identities=41%  Similarity=0.817  Sum_probs=19.0

Q ss_pred             HHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        59 ~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      +.|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         5 ~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em4_A            5 SSGTGQRPYECI--ECGKAFKTKSSLICHRRSHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSSSEECS--SSCCEESSHHHHHHHHHHHSSSSCCCC
T ss_pred             cccCCCcCcCCC--CCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            344444444444  455555555555555545555554444

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.8e-10  Score=55.98  Aligned_cols=40  Identities=38%  Similarity=0.825  Sum_probs=19.9

Q ss_pred             HHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc
Q psy17779         59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT  100 (141)
Q Consensus        59 ~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~  100 (141)
                      +.|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         5 ~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            5 SSGTGEKPYECK--VCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSEECS--SSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCcCeECC--CCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444455554  4555555555555555555555555443

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.90  E-value=1.9e-09  Score=53.48  Aligned_cols=37  Identities=24%  Similarity=0.565  Sum_probs=22.0

Q ss_pred             CCCCccccCcchhccCChHHHHHHHHHhCCCCCcccc
Q psy17779         34 QRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCD   70 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   70 (141)
                      .++++|.|.+|++.|.....|..|++.|.++++|.|+
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~   42 (45)
T 2epq_A            6 SGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGP   42 (45)
T ss_dssp             SSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCC
T ss_pred             CCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCc
Confidence            3455566666666666666666666666666666554

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.7e-10  Score=56.01  Aligned_cols=39  Identities=44%  Similarity=0.843  Sum_probs=18.9

Q ss_pred             HHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        59 ~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      +.|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         5 ~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eow_A            5 SSGTGEKPYKCN--ECGKAFRARSSLAIHQATHSGEKPSGP   43 (46)
T ss_dssp             CCSCCCCCEECT--TSCCEESSHHHHHHHHHHHCCCSCSCT
T ss_pred             CCCCCCCCeecc--ccCChhcCHHHHHHHHHHcCCCCCCCC
Confidence            334444444444  455555555555555544555444444

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6.7e-10  Score=55.48  Aligned_cols=39  Identities=36%  Similarity=0.776  Sum_probs=20.4

Q ss_pred             HHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        59 ~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      +.|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         5 ~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            5 SSGSGKKPYECK--ECRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CSCCCSCSCCCS--SSCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CCcCCCCCcCCC--CcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            344455555554  455555555555555555555555554

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.7e-10  Score=55.74  Aligned_cols=41  Identities=39%  Similarity=0.771  Sum_probs=21.5

Q ss_pred             HHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc
Q psy17779         58 IRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT  100 (141)
Q Consensus        58 ~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~  100 (141)
                      ++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         4 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            4 GSSGMGEKCYKCD--VCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCCCBCS--SSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             ccccCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3344455555554  4555555555555555555555555553

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4e-10  Score=56.28  Aligned_cols=41  Identities=49%  Similarity=0.822  Sum_probs=21.7

Q ss_pred             HhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         60 IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        60 ~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      .|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         6 ~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCD--VCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECS--SSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCc--ccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555554  455555555555555555555555555443

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6.5e-10  Score=55.52  Aligned_cols=35  Identities=40%  Similarity=0.730  Sum_probs=16.9

Q ss_pred             CCCccccCcchhccCChHHHHHHHHHhCCCCCccc
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC   69 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   69 (141)
                      ++++|.|..|++.|.....|..|++.|.++++|.|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en9_A            9 GKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             SSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSC
T ss_pred             CCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            34444444444444444444444444444444444

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.1e-10  Score=55.93  Aligned_cols=41  Identities=37%  Similarity=0.677  Sum_probs=22.1

Q ss_pred             HhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         60 IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        60 ~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      .|.++++|.|.  .|++.|.....|..|++.|++++||.|..|
T Consensus         6 ~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCS--ECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCS--SSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCeeCC--CCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34455555554  555555555555555555555555555543

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=1e-09  Score=55.36  Aligned_cols=36  Identities=31%  Similarity=0.606  Sum_probs=19.0

Q ss_pred             CCCccccCcchhccCChHHHHHHHHHhCCCCCcccc
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCD   70 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~   70 (141)
                      ++++|.|.+|++.|.....|..|++.|.++++|.|.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSG   44 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCC
Confidence            344555555555555555555555555555555554

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.8e-10  Score=55.98  Aligned_cols=41  Identities=46%  Similarity=0.904  Sum_probs=22.7

Q ss_pred             HHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc
Q psy17779         58 IRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT  100 (141)
Q Consensus        58 ~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~  100 (141)
                      ++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         4 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            4 GSSGTGEKPYICN--ECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCSCCSEECS--SSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCcCEECC--CCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            3445555555554  5555555555555555555555555553

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.5e-10  Score=56.06  Aligned_cols=40  Identities=35%  Similarity=0.769  Sum_probs=20.2

Q ss_pred             HHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc
Q psy17779         59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT  100 (141)
Q Consensus        59 ~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~  100 (141)
                      +.|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         5 ~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            5 SSGTGEKPFECS--ECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCCSEECS--SSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCcCCC--CCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444555554  4555555555555555555555555443

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.6e-10  Score=56.05  Aligned_cols=40  Identities=43%  Similarity=0.899  Sum_probs=19.6

Q ss_pred             HHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         58 IRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        58 ~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      ++.|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         4 ~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~kp~~C   43 (46)
T 2eor_A            4 GSSGTGEKPYNCE--ECGKAFIHDSQLQEHQRIHTGEKPSGP   43 (46)
T ss_dssp             SSSSSCCCSEECT--TTCCEESSHHHHHHHHHHHHSCCCSSS
T ss_pred             CcCcCCCcCccCC--CCCCCcCCHHHHHHHHHhcCCCCCCCC
Confidence            3344444455544  455555555555555555555555444

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.6e-10  Score=55.74  Aligned_cols=41  Identities=44%  Similarity=0.844  Sum_probs=21.8

Q ss_pred             HHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc
Q psy17779         58 IRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT  100 (141)
Q Consensus        58 ~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~  100 (141)
                      ++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         4 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            4 GSSGTGEKPYKCN--ECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCCCT--TTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             ccccCCCCCeECC--cCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3444555555554  4555555555555555555555555553

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.5e-10  Score=55.78  Aligned_cols=39  Identities=44%  Similarity=0.848  Sum_probs=19.5

Q ss_pred             HHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        59 ~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      +.|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         5 ~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emi_A            5 SSGTGERHYECS--ECGKAFIQKSTLSMHQRIHRGEKPSGP   43 (46)
T ss_dssp             CSCSSCCCEECS--SSCCEESSHHHHHHHHGGGCSCCCCSC
T ss_pred             cccCCCCCCCCC--CCCcccCCHHHHHHHHhHhCCCCCCCC
Confidence            344444455554  455555555555555555555555544

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.9e-10  Score=55.06  Aligned_cols=41  Identities=34%  Similarity=0.613  Sum_probs=24.7

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCN--ECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCT--TTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECC--CCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            34455556666665  566666666666666666666666655

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5e-10  Score=55.95  Aligned_cols=39  Identities=46%  Similarity=0.882  Sum_probs=19.6

Q ss_pred             HHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        59 ~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      +.|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         5 ~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytp_A            5 SSGTGERHYECS--ECGKAFARKSTLIMHQRIHTGEKPSGP   43 (46)
T ss_dssp             CSSCCCCCEECS--SSCCEESSHHHHHHHHTTTSCCCCCSS
T ss_pred             cCcCCCCCeECC--cCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            344444555554  455555555555555555555555544

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.1e-10  Score=56.06  Aligned_cols=43  Identities=42%  Similarity=0.841  Sum_probs=23.2

Q ss_pred             HhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccc
Q psy17779         60 IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHC  102 (141)
Q Consensus        60 ~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C  102 (141)
                      .|.++++|.|..+.|++.|.....|..|++.|++++||.|..|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3445555555322455555555555555555555555555544

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.1e-10  Score=55.66  Aligned_cols=40  Identities=45%  Similarity=0.864  Sum_probs=20.2

Q ss_pred             HHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc
Q psy17779         59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT  100 (141)
Q Consensus        59 ~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~  100 (141)
                      +.|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         5 ~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            5 SSGTGEKPYKCQ--VCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             SSCSSCCSCBCS--SSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCcccCCC--CCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            344444555554  4555555555555555555555555443

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.7e-10  Score=54.83  Aligned_cols=40  Identities=35%  Similarity=0.688  Sum_probs=22.0

Q ss_pred             HHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         58 IRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        58 ~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      ++.|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         4 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            4 GSSGTGEKPYECN--ECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             SSCCSCCCSEECT--TTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             ccCCCCCCCeECC--CCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            3445555555554  555555555555555555555555554

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.1e-10  Score=55.56  Aligned_cols=40  Identities=45%  Similarity=0.970  Sum_probs=20.0

Q ss_pred             HHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc
Q psy17779         59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT  100 (141)
Q Consensus        59 ~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~  100 (141)
                      +.|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         5 ~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            5 SSGTGEKPYRCG--ECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCEECS--SSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             cCCCCCCCeECC--CCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            344444455554  4555555555555555555555555443

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.2e-10  Score=54.69  Aligned_cols=41  Identities=39%  Similarity=0.834  Sum_probs=25.4

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         2 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCD--QCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCT--TTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCC--CccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            34455566666665  566666666666666666666666654

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=7.1e-10  Score=54.83  Aligned_cols=40  Identities=30%  Similarity=0.593  Sum_probs=20.9

Q ss_pred             HHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         58 IRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        58 ~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      ++.|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         4 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            4 GSSGAGENPFKCS--KCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             SCCCSCCCSEECS--SSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             ccccCCCCCeECC--CCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            3344555555554  455555555555555555555555544

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.5e-10  Score=55.52  Aligned_cols=35  Identities=31%  Similarity=0.542  Sum_probs=17.2

Q ss_pred             CCCccccCcchhccCChHHHHHHHHHhCCCCCccc
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC   69 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   69 (141)
                      ++++|.|..|++.|.....|..|++.|.++++|.|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A            9 GEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             SCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             CCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            34445555555555555555555544444444444

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.8e-10  Score=55.45  Aligned_cols=41  Identities=39%  Similarity=0.728  Sum_probs=22.0

Q ss_pred             HHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCc
Q psy17779         58 IRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCT  100 (141)
Q Consensus        58 ~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~  100 (141)
                      ++.|.++++|.|.  .|++.|.....|..|++.|++++||.|.
T Consensus         4 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            4 GSSGSGERPFKCN--ECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CSCSSCCCSCCCS--SSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CcCCCCCCCeECC--CCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3445555555554  5555555555555555555555555553

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.85  E-value=8.6e-10  Score=53.88  Aligned_cols=34  Identities=24%  Similarity=0.494  Sum_probs=16.3

Q ss_pred             CCCccccCcchhccCChHHHHHHHHHhCCCCCcc
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYK   68 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~   68 (141)
                      ++++|.|..|++.|.....|..|++.|.++++|.
T Consensus         8 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~   41 (42)
T 2epc_A            8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS   41 (42)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCC
Confidence            3444445445544544444444444444444443

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=6.8e-10  Score=54.86  Aligned_cols=41  Identities=39%  Similarity=0.745  Sum_probs=22.6

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECC--ECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEET--TTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCC--CCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            33445555555554  555555555555555555555555554

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=7e-10  Score=54.28  Aligned_cols=38  Identities=39%  Similarity=0.803  Sum_probs=20.3

Q ss_pred             HhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         60 IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        60 ~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      .|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         5 ~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            5 SSGGEKPYPCE--ICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSSSCCBCCS--SSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             ccCCCCCEECC--CCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            44455555554  555555555555555555555555543

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=7.3e-10  Score=55.34  Aligned_cols=35  Identities=34%  Similarity=0.581  Sum_probs=17.8

Q ss_pred             CCCccccCcchhccCChHHHHHHHHHhCCCCCccc
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC   69 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   69 (141)
                      ++++|.|..|++.|.....|..|++.|.++++|.|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            9 GEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             SCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             CCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            34445555555555555555555555555555444

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=1.4e-09  Score=53.78  Aligned_cols=38  Identities=24%  Similarity=0.499  Sum_probs=19.7

Q ss_pred             HhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         60 IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        60 ~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      .|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         6 ~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            6 SGAAKTTSECQ--ECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCSSSCCCCCT--TTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCcCeECC--CCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            34444555554  455555555555555555555555544

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.84  E-value=2e-09  Score=51.39  Aligned_cols=35  Identities=34%  Similarity=0.712  Sum_probs=31.5

Q ss_pred             hCCCCCeeCc--cchhccCChHHHHHHHHhhCCCCCc
Q psy17779         91 HSGLRPYPCT--HCGKKFGRKDHLKKHLRTHFPQPRY  125 (141)
Q Consensus        91 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  125 (141)
                      |++++||.|.  .|++.|...+.|..|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5678999999  5999999999999999999999887

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=5.6e-10  Score=54.61  Aligned_cols=38  Identities=39%  Similarity=0.804  Sum_probs=19.6

Q ss_pred             HhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         60 IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        60 ~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      .|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         5 ~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            5 SSGGEKPYKCE--TCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCSSCSEECT--TTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             ccCCCCCEeCC--CcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            34445555554  455555555555555555555555443

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.83  E-value=2.9e-09  Score=49.34  Aligned_cols=32  Identities=34%  Similarity=0.591  Sum_probs=27.5

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhCCCCCcc
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYV  126 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  126 (141)
                      +||.|..|++.|...+.|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47888889999999999999999998888874

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=9e-10  Score=54.44  Aligned_cols=41  Identities=17%  Similarity=0.399  Sum_probs=23.0

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECS--KCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECT--TTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECC--CCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            34445555555554  555555555555555555555555554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.82  E-value=3.9e-11  Score=64.18  Aligned_cols=48  Identities=23%  Similarity=0.434  Sum_probs=25.3

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCCh
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRK  109 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~  109 (141)
                      |++.|.++++|.|.  .|++.|.....|.   +.|++++||.|..|++.|...
T Consensus         5 h~~~H~~~k~~~C~--~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~   52 (62)
T 1vd4_A            5 DERDSTNRASFKCP--VCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEED   52 (62)
T ss_dssp             CSSSCCSSSEEECS--SSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEEC
T ss_pred             HHHHcCCCCCccCC--CCCchhccHHHhH---hhcCCCCCEECCCCCCccccC
Confidence            34445555555554  5555555544443   445555555555555555443

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.1e-09  Score=54.64  Aligned_cols=38  Identities=47%  Similarity=0.939  Sum_probs=18.7

Q ss_pred             HhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         60 IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        60 ~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      .|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         6 ~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enh_A            6 SGTGEKPYECD--VCRKAFSHHASLTQHQRVHSGEKPSGP   43 (46)
T ss_dssp             CCCCSSSCBCT--TTCCBCSSSHHHHHHGGGSCCSCCCCC
T ss_pred             CcCCCCCcCCC--CcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            34444445544  455555555555555555555555444

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.82  E-value=1.7e-10  Score=61.68  Aligned_cols=49  Identities=8%  Similarity=0.148  Sum_probs=42.4

Q ss_pred             HHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccccccccccccc
Q psy17779         85 TRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSCYPYMYGGYTS  138 (141)
Q Consensus        85 ~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~  138 (141)
                      ..|++.|++++||.|..|++.|.....|.   ++|.+++||.|.  .|.+.|..
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~--~C~k~f~~   51 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCT--FCHTEVEE   51 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCS--SSCCBCEE
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECC--CCCCcccc
Confidence            35778899999999999999999988876   889999999977  78888854

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=3.8e-09  Score=50.73  Aligned_cols=33  Identities=24%  Similarity=0.282  Sum_probs=29.1

Q ss_pred             HhCCCCCeeCcc--chhccCChHHHHHHHHhhCCC
Q psy17779         90 IHSGLRPYPCTH--CGKKFGRKDHLKKHLRTHFPQ  122 (141)
Q Consensus        90 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  122 (141)
                      .+++++||.|..  |+++|...+.|..|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            467889999986  999999999999999999876

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.1e-09  Score=54.60  Aligned_cols=39  Identities=44%  Similarity=0.901  Sum_probs=19.7

Q ss_pred             HHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        59 ~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      +.|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         5 ~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A            5 SSGTGEKPYECN--QCGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CSSCCCCSSEET--TTTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             cCCCCCCCeECC--CCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            344444555554  455555555555555555555555544

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=9.2e-10  Score=54.97  Aligned_cols=39  Identities=33%  Similarity=0.698  Sum_probs=19.6

Q ss_pred             HHhCCCCCccccCCccCcccCChHhHHHHHHHhCC-CCCeeC
Q psy17779         59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG-LRPYPC   99 (141)
Q Consensus        59 ~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~-~~~~~C   99 (141)
                      +.|.++++|.|.  .|++.|.....|..|++.|++ ++||.|
T Consensus         5 ~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            5 SSGQKEKCFKCN--KCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCSCCEECS--SSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             cccCCCCCEECc--CCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            344444555554  455555555555555555555 555544

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=5e-09  Score=49.25  Aligned_cols=34  Identities=32%  Similarity=0.543  Sum_probs=30.5

Q ss_pred             HhCCCCCeeCccchhccCChHHHHHHHHhhCCCC
Q psy17779         90 IHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        90 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      .|.+++||.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            4778899999999999999999999999998874

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.8e-09  Score=53.35  Aligned_cols=41  Identities=34%  Similarity=0.705  Sum_probs=23.0

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      |++.|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECN--ECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECS--SSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECC--CCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            33445555555554  555556555556666555555555544

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=7e-10  Score=54.83  Aligned_cols=39  Identities=38%  Similarity=0.696  Sum_probs=19.8

Q ss_pred             HHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        59 ~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      +.|.++++|.|.  .|++.|.....|..|++.|++++||.|
T Consensus         5 ~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            5 SSGTDSKSYNCN--ECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCEEET--TTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             cCCCCCCCeECc--ccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            344444555554  455555555555555555555555544

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.78  E-value=6.1e-09  Score=51.15  Aligned_cols=35  Identities=23%  Similarity=0.429  Sum_probs=19.7

Q ss_pred             CCCccccCcchhccCChHHHHHHHHHhCCCCCccc
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC   69 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   69 (141)
                      ++++|.|..|++.|.....|..|++.|.++++|.|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            7 GNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             SSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             CCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            44555555555555555555555555555555554

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=3.5e-09  Score=49.86  Aligned_cols=34  Identities=24%  Similarity=0.307  Sum_probs=30.5

Q ss_pred             HhCCCCCeeCccchhccCChHHHHHHHHhhCCCC
Q psy17779         90 IHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        90 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      .|++++||.|..|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            4778899999999999999999999999998764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=4.8e-09  Score=49.38  Aligned_cols=34  Identities=26%  Similarity=0.498  Sum_probs=30.3

Q ss_pred             HhCCCCCeeCccchhccCChHHHHHHHHhhCCCC
Q psy17779         90 IHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        90 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      .|.+++||.|..|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            4788899999999999999999999999998764

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=4.3e-09  Score=52.48  Aligned_cols=35  Identities=31%  Similarity=0.581  Sum_probs=19.3

Q ss_pred             CCCccccCcchhccCChHHHHHHHHHhCCCCCccc
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC   69 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   69 (141)
                      ++++|.|..|++.|.....|..|++.|.++++|.|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eom_A            9 GERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCC
Confidence            44555555555555555555555555555555555

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=4e-09  Score=51.20  Aligned_cols=35  Identities=34%  Similarity=0.702  Sum_probs=18.4

Q ss_pred             CCCccccCcchhccCChHHHHHHHHHhCCCCCccc
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC   69 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   69 (141)
                      ++++|.|..|++.|.....|..|++.|.++++|.|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            7 GQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            44455555555555555555555555555555443

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=2.7e-10  Score=63.22  Aligned_cols=66  Identities=23%  Similarity=0.340  Sum_probs=51.7

Q ss_pred             HHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCC
Q psy17779         54 LKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPR  124 (141)
Q Consensus        54 l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  124 (141)
                      |..|+..+.+.+++.|.  .|+..|. ...|..|+ .+.+++|+.|..|++.|. ...|..|.++|.+++.
T Consensus         5 L~~H~~~~c~~r~~~C~--~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~~   70 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQ--HCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREGS   70 (75)
T ss_dssp             CSCCCCCCCCCCCEECS--SSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBSS
T ss_pred             HHhhCcccCCCcccCCc--ccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCcC
Confidence            44566667778888887  7888884 77888888 788888888888888777 4788888888877643

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1e-09  Score=54.79  Aligned_cols=35  Identities=31%  Similarity=0.527  Sum_probs=17.6

Q ss_pred             CCCccccCcchhccCChHHHHHHHHHhCCCCCccc
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC   69 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   69 (141)
                      ++++|.|..|++.|.....|..|++.|.++++|.|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            9 GEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             CCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            34445555555555555555555555554444444

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.9e-09  Score=49.99  Aligned_cols=35  Identities=23%  Similarity=0.353  Sum_probs=30.8

Q ss_pred             HHhCCCCCeeCccchhccCCh-HHHHHHHHhhCCCC
Q psy17779         89 RIHSGLRPYPCTHCGKKFGRK-DHLKKHLRTHFPQP  123 (141)
Q Consensus        89 ~~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~~  123 (141)
                      +.|++++||.|..|++.|... +.|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            357889999999999999998 99999999998764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=7.4e-09  Score=48.61  Aligned_cols=34  Identities=35%  Similarity=0.469  Sum_probs=29.8

Q ss_pred             HhCCCCCeeCccchhccCChHHHHHHHHhhCCCC
Q psy17779         90 IHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        90 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      .|.++++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4678889999999999999999999999998875

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=6.9e-09  Score=51.42  Aligned_cols=36  Identities=42%  Similarity=0.779  Sum_probs=21.7

Q ss_pred             CCCCccccCcchhccCChHHHHHHHHHhCCCCCccc
Q psy17779         34 QRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC   69 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   69 (141)
                      .++++|.|..|++.|.....|..|++.|.++++|.|
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            8 TGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            345556666666666666666666666666666555

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=4e-09  Score=50.10  Aligned_cols=34  Identities=26%  Similarity=0.368  Sum_probs=30.1

Q ss_pred             HHhCCCCCeeCccchhccCChHHHHHH-HHhhCCC
Q psy17779         89 RIHSGLRPYPCTHCGKKFGRKDHLKKH-LRTHFPQ  122 (141)
Q Consensus        89 ~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  122 (141)
                      +.|++++||.|..|++.|...+.|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            468889999999999999999999999 8888764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=1.3e-08  Score=47.87  Aligned_cols=34  Identities=32%  Similarity=0.512  Sum_probs=30.1

Q ss_pred             HhCCCCCeeCccchhccCChHHHHHHHHhhCCCC
Q psy17779         90 IHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        90 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      .|.+++||.|..|++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4678899999999999999999999999998874

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.66  E-value=1.3e-08  Score=51.26  Aligned_cols=36  Identities=25%  Similarity=0.582  Sum_probs=28.1

Q ss_pred             HhCCCCCeeCccchhccCChHHHHHHHH-hhCCCCCc
Q psy17779         90 IHSGLRPYPCTHCGKKFGRKDHLKKHLR-THFPQPRY  125 (141)
Q Consensus        90 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~  125 (141)
                      +|++++||.|..|++.|.....|..|++ +|.++.+-
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            3778899999999999999999999999 88887654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.64  E-value=3.1e-08  Score=53.48  Aligned_cols=36  Identities=25%  Similarity=0.472  Sum_probs=18.8

Q ss_pred             CCCCccccCc--chhccCChHHHHHHH-HHhCCCCCccc
Q psy17779         34 QRPKKFNCPH--CNVAFSNNGQLKGHI-RIHTGERPYKC   69 (141)
Q Consensus        34 ~~~~~~~C~~--C~~~f~~~~~l~~h~-~~h~~~~~~~c   69 (141)
                      .+++||.|.+  |+++|.+...|..|+ ++|++++|+.|
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            3455555543  555555555555554 34555555544

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.64  E-value=2.5e-08  Score=47.75  Aligned_cols=35  Identities=26%  Similarity=0.678  Sum_probs=23.3

Q ss_pred             CCCccccCcchhccCChHHHHHHHHHhCCCCCccc
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKC   69 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c   69 (141)
                      ++++|.|..|++.|.....|..|++.|.++++|.+
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            45566777777777777777777766666666543

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.63  E-value=2.1e-08  Score=47.46  Aligned_cols=33  Identities=33%  Similarity=0.646  Sum_probs=28.8

Q ss_pred             hCCCCCeeCcc--chhccCChHHHHHHHHhhCCCC
Q psy17779         91 HSGLRPYPCTH--CGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        91 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      |++++||.|..  |++.|...+.|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            67889999984  9999999999999999998764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.58  E-value=5.6e-08  Score=44.78  Aligned_cols=30  Identities=33%  Similarity=0.621  Sum_probs=20.4

Q ss_pred             ccccCcchhccCChHHHHHHHHHhCCCCCc
Q psy17779         38 KFNCPHCNVAFSNNGQLKGHIRIHTGERPY   67 (141)
Q Consensus        38 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~   67 (141)
                      ||.|..|++.|.....|..|+++|.++++|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            566777777777777777777666666654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.58  E-value=5.1e-08  Score=43.45  Aligned_cols=30  Identities=33%  Similarity=0.791  Sum_probs=26.1

Q ss_pred             CCCeeCccchhccCChHHHHHHHHhhCCCC
Q psy17779         94 LRPYPCTHCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        94 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      ++||.|..|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            468999999999999999999999998764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.55  E-value=2.2e-09  Score=49.37  Aligned_cols=31  Identities=35%  Similarity=0.685  Sum_probs=27.0

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhCCCCCc
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHFPQPRY  125 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  125 (141)
                      +||.|..|++.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4788999999999999999999999988886

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.55  E-value=1.3e-08  Score=50.99  Aligned_cols=38  Identities=21%  Similarity=0.483  Sum_probs=32.7

Q ss_pred             HHHHHhCCCCCeeCc--cchhccCChHHHHHHHHhhCCCC
Q psy17779         86 RHKRIHSGLRPYPCT--HCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      .|...|++++||.|.  .|++.|...+.|..|+++|++++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            344568899999996  69999999999999999999875

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.54  E-value=9.5e-10  Score=62.89  Aligned_cols=56  Identities=20%  Similarity=0.300  Sum_probs=31.6

Q ss_pred             HhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCC
Q psy17779         60 IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFP  121 (141)
Q Consensus        60 ~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  121 (141)
                      .|.++++|.|.  .|++.|.....|..|++.|++++||.|..|.    ....|..|.++|.+
T Consensus        19 ~H~~~kpy~C~--~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCK--HCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECS--SSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCC--CCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            35555666665  5666666666666666666666666665443    23333445555544

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.52  E-value=9.2e-08  Score=44.35  Aligned_cols=32  Identities=25%  Similarity=0.474  Sum_probs=21.5

Q ss_pred             CCCCccccCcchhccCChHHHHHHHHHhCCCC
Q psy17779         34 QRPKKFNCPHCNVAFSNNGQLKGHIRIHTGER   65 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   65 (141)
                      .++++|.|..|++.|.+...|..|++.|.+++
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            3 SGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            34566777777777777777777777666554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.50  E-value=6.8e-08  Score=42.76  Aligned_cols=29  Identities=34%  Similarity=0.681  Sum_probs=24.9

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhCCCC
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      +||.|..|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            47889999999999999999999888764

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=1e-07  Score=44.82  Aligned_cols=32  Identities=28%  Similarity=0.679  Sum_probs=20.5

Q ss_pred             CCCCccccCcchhccCChHHHHHHHHHhCCCC
Q psy17779         34 QRPKKFNCPHCNVAFSNNGQLKGHIRIHTGER   65 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   65 (141)
                      .++++|.|..|++.|.....|..|++.|.+++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            5 SSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            34566666666666666666666666666554

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.50  E-value=1e-07  Score=43.30  Aligned_cols=30  Identities=37%  Similarity=0.760  Sum_probs=25.8

Q ss_pred             CCCeeCc--cchhccCChHHHHHHHHhhCCCC
Q psy17779         94 LRPYPCT--HCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        94 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      ++||.|.  .|++.|...+.|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4688998  79999999999999999998764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.49  E-value=9.3e-08  Score=42.54  Aligned_cols=30  Identities=23%  Similarity=0.610  Sum_probs=25.1

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhCCCCC
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHFPQPR  124 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  124 (141)
                      +||.|..|++.|...+.|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            468888899999888889899888887764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.49  E-value=1e-07  Score=44.27  Aligned_cols=32  Identities=25%  Similarity=0.551  Sum_probs=20.4

Q ss_pred             CCCCccccCcchhccCChHHHHHHHHHhCCCC
Q psy17779         34 QRPKKFNCPHCNVAFSNNGQLKGHIRIHTGER   65 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   65 (141)
                      .++++|.|..|++.|.....|..|++.|.+++
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            3 SGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            34566666666666666666666666666543

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.49  E-value=1.1e-07  Score=42.06  Aligned_cols=29  Identities=38%  Similarity=0.907  Sum_probs=23.6

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhCCCC
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      +||.|..|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            46888888888888888888888887764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.48  E-value=1.1e-08  Score=58.44  Aligned_cols=41  Identities=22%  Similarity=0.348  Sum_probs=38.0

Q ss_pred             HHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         88 KRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        88 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      .+.|++++||.|..|++.|.....|..|+++|++++||.|-
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~   57 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAK   57 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccc
Confidence            45689999999999999999999999999999999999865

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.48  E-value=8e-08  Score=42.45  Aligned_cols=29  Identities=41%  Similarity=0.854  Sum_probs=24.6

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhCCCC
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47889999999999999999998888764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=1.5e-07  Score=44.96  Aligned_cols=32  Identities=22%  Similarity=0.578  Sum_probs=22.8

Q ss_pred             cCCCCccccCc--chhccCChHHHHHHHHHhCCC
Q psy17779         33 NQRPKKFNCPH--CNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        33 ~~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      ..+++||.|..  |++.|.....|..|+++|++.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34667777765  777777777777777777654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.47  E-value=1.3e-07  Score=50.90  Aligned_cols=34  Identities=26%  Similarity=0.432  Sum_probs=24.7

Q ss_pred             hCCCCCeeCccchhccCChHHHHHHHHhhCCCCC
Q psy17779         91 HSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPR  124 (141)
Q Consensus        91 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  124 (141)
                      +..++||.|..|++.|...+.|..|+++|++++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            4566777777777777777777777777776643

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.43  E-value=1.4e-07  Score=42.51  Aligned_cols=29  Identities=52%  Similarity=1.024  Sum_probs=23.5

Q ss_pred             CCeeCc--cchhccCChHHHHHHHHhhCCCC
Q psy17779         95 RPYPCT--HCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        95 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      +||.|.  .|++.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            468887  78888888888888888888764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.43  E-value=9.6e-08  Score=42.13  Aligned_cols=29  Identities=38%  Similarity=0.793  Sum_probs=23.7

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhCCCC
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      +||.|..|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            47888888888888888888888887764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.40  E-value=1.9e-07  Score=40.92  Aligned_cols=28  Identities=43%  Similarity=1.014  Sum_probs=24.1

Q ss_pred             CCCeeCccchhccCChHHHHHHHHhhCC
Q psy17779         94 LRPYPCTHCGKKFGRKDHLKKHLRTHFP  121 (141)
Q Consensus        94 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  121 (141)
                      ++||.|..|++.|...+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4689999999999999999999988864

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.75  E-value=3.8e-08  Score=43.96  Aligned_cols=30  Identities=33%  Similarity=0.888  Sum_probs=25.5

Q ss_pred             CCCeeCccchhccCChHHHHHHHHhhCCCC
Q psy17779         94 LRPYPCTHCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        94 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      ++||.|..|++.|...+.|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            367899999999999999999999888764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.74  E-value=4e-08  Score=43.64  Aligned_cols=29  Identities=34%  Similarity=0.750  Sum_probs=24.6

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhCCCC
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      +||.|..|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            47889999999999999999998888764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.38  E-value=2.7e-07  Score=40.14  Aligned_cols=27  Identities=33%  Similarity=0.674  Sum_probs=23.2

Q ss_pred             CCCeeCccchhccCChHHHHHHHHhhC
Q psy17779         94 LRPYPCTHCGKKFGRKDHLKKHLRTHF  120 (141)
Q Consensus        94 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  120 (141)
                      ++||.|..|++.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            468899999999999999999988874

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=3.7e-07  Score=42.52  Aligned_cols=32  Identities=38%  Similarity=0.733  Sum_probs=22.0

Q ss_pred             cCCCCccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         33 NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        33 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      +.++++|.|..|++.|.....|..|++.|.++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            34566777777777777777777777766654

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=3.7e-07  Score=42.60  Aligned_cols=31  Identities=32%  Similarity=0.613  Sum_probs=21.0

Q ss_pred             CCCCccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         34 QRPKKFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      .++++|.|..|++.|.....|..|++.|.++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            5 SSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            4556677777777777777777777666553

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=5.2e-07  Score=41.98  Aligned_cols=31  Identities=32%  Similarity=0.614  Sum_probs=21.5

Q ss_pred             CCCCccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         34 QRPKKFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      .++++|.|..|++.|.....|..|++.|.++
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            5 SSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            4556677777777777777777777766654

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.35  E-value=3.5e-07  Score=43.21  Aligned_cols=33  Identities=27%  Similarity=0.480  Sum_probs=21.1

Q ss_pred             CCCccccC--cchhccCChHHHHHHHHHhCCCCCc
Q psy17779         35 RPKKFNCP--HCNVAFSNNGQLKGHIRIHTGERPY   67 (141)
Q Consensus        35 ~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~   67 (141)
                      ++++|.|.  .|++.|.....|..|++.|.++++|
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            45566666  3666666666666666666665554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=4.7e-07  Score=42.21  Aligned_cols=31  Identities=42%  Similarity=0.743  Sum_probs=22.5

Q ss_pred             CCCCccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         34 QRPKKFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      .++++|.|..|++.|.....|..|++.|.++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            4566777777777777777777777777654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.34  E-value=4.4e-07  Score=42.80  Aligned_cols=26  Identities=23%  Similarity=0.443  Sum_probs=23.0

Q ss_pred             hCCCCCeeCccchhccCChHHHHHHH
Q psy17779         91 HSGLRPYPCTHCGKKFGRKDHLKKHL  116 (141)
Q Consensus        91 h~~~~~~~C~~C~~~f~~~~~l~~H~  116 (141)
                      +.+++||.|..|+++|.+.+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            46789999999999999999999998

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.33  E-value=2.5e-07  Score=41.20  Aligned_cols=29  Identities=31%  Similarity=0.701  Sum_probs=23.9

Q ss_pred             CCeeCccchhccCChHHHHHH-HHhhCCCC
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKH-LRTHFPQP  123 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~  123 (141)
                      +||.|..|++.|...+.|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            478888899999988889888 68887764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.33  E-value=2.5e-07  Score=40.33  Aligned_cols=27  Identities=26%  Similarity=0.565  Sum_probs=23.3

Q ss_pred             CCCeeCccchhccCChHHHHHHHHhhC
Q psy17779         94 LRPYPCTHCGKKFGRKDHLKKHLRTHF  120 (141)
Q Consensus        94 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  120 (141)
                      ++||.|..|++.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            468999999999999999999988774

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.33  E-value=2.5e-07  Score=43.43  Aligned_cols=28  Identities=36%  Similarity=0.705  Sum_probs=14.6

Q ss_pred             CCCccccCcchhccCChHHHHHHHHHhC
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIRIHT   62 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~   62 (141)
                      ++++|.|..|++.|.....|..|++.|.
T Consensus         8 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            8 GIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCCccCCCCCcccCcHHHHHHHHHHhc
Confidence            4445555555555555555555555444

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=3.5e-07  Score=42.69  Aligned_cols=31  Identities=19%  Similarity=0.441  Sum_probs=21.4

Q ss_pred             CCCCccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         34 QRPKKFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      .++++|.|..|++.|.....|..|++.|.++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            5 SSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            4556677777777777777777777766553

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.31  E-value=3.5e-07  Score=39.62  Aligned_cols=27  Identities=33%  Similarity=0.679  Sum_probs=20.8

Q ss_pred             CeeCccchhccCChHHHHHHHHhhCCC
Q psy17779         96 PYPCTHCGKKFGRKDHLKKHLRTHFPQ  122 (141)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  122 (141)
                      ||.|..|++.|...+.|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            477888888888888888888888753

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.30  E-value=2.7e-07  Score=43.55  Aligned_cols=26  Identities=35%  Similarity=0.740  Sum_probs=22.5

Q ss_pred             cCCCCccccCcchhccCChHHHHHHH
Q psy17779         33 NQRPKKFNCPHCNVAFSNNGQLKGHI   58 (141)
Q Consensus        33 ~~~~~~~~C~~C~~~f~~~~~l~~h~   58 (141)
                      ..+++||.|..|+++|.+.+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            35788899999999999999999997

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.29  E-value=1.7e-07  Score=51.77  Aligned_cols=58  Identities=26%  Similarity=0.446  Sum_probs=50.7

Q ss_pred             cCCCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCC
Q psy17779         33 NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLR   95 (141)
Q Consensus        33 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~   95 (141)
                      .-+.+++.|..|++.|. ...|..|+ .+.+.+++.|.  .|++.|.. ..|..|++.+.+++
T Consensus        12 ~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~--~C~~~~~~-~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           12 ECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCG--NCGRNVLV-KDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECS--SSCCEEET-TGGGTHHHHBTTBS
T ss_pred             cCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcc--cCCCcCcH-HHHHHHHHHccCCc
Confidence            45788999999999995 88899999 89999999998  89998774 78999999988764

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=5.4e-07  Score=42.27  Aligned_cols=31  Identities=32%  Similarity=0.708  Sum_probs=21.7

Q ss_pred             CCCCccccCcchhccCCh-HHHHHHHHHhCCC
Q psy17779         34 QRPKKFNCPHCNVAFSNN-GQLKGHIRIHTGE   64 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f~~~-~~l~~h~~~h~~~   64 (141)
                      .++++|.|..|++.|... ..|..|++.|.++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            5 SSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            456677777777777777 7777777766654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.27  E-value=6.1e-07  Score=39.69  Aligned_cols=28  Identities=25%  Similarity=0.587  Sum_probs=20.9

Q ss_pred             CccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      ++|.|..|++.|.....|..|++.|.++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            5677777888888777777777777654

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.27  E-value=8.9e-07  Score=38.89  Aligned_cols=27  Identities=44%  Similarity=0.774  Sum_probs=19.6

Q ss_pred             ccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         38 KFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        38 ~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      +|.|..|++.|.....|..|++.|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            577777777777777777777777654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.24  E-value=5.9e-07  Score=39.54  Aligned_cols=28  Identities=36%  Similarity=0.732  Sum_probs=20.8

Q ss_pred             CccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      ++|.|..|++.|.....|..|++.|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3577888888888888888887777654

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.23  E-value=1.1e-06  Score=38.78  Aligned_cols=28  Identities=21%  Similarity=0.595  Sum_probs=20.5

Q ss_pred             ccccCcchhccCChHHHHHHHHHhCCCC
Q psy17779         38 KFNCPHCNVAFSNNGQLKGHIRIHTGER   65 (141)
Q Consensus        38 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~   65 (141)
                      +|.|..|++.|.....|..|++.|.+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            5777777777777777777777776553

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.20  E-value=9.1e-07  Score=38.76  Aligned_cols=28  Identities=43%  Similarity=1.038  Sum_probs=20.6

Q ss_pred             CccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      ++|.|..|++.|.....|..|++.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            3577777888887777777777777654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.20  E-value=8.7e-07  Score=38.41  Aligned_cols=26  Identities=27%  Similarity=0.584  Sum_probs=20.7

Q ss_pred             CCccccCcchhccCChHHHHHHHHHh
Q psy17779         36 PKKFNCPHCNVAFSNNGQLKGHIRIH   61 (141)
Q Consensus        36 ~~~~~C~~C~~~f~~~~~l~~h~~~h   61 (141)
                      +++|.|..|++.|.....|..|++.|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            35788888888888888888888765

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.19  E-value=9.1e-07  Score=38.80  Aligned_cols=28  Identities=43%  Similarity=0.960  Sum_probs=20.0

Q ss_pred             CccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      ++|.|..|++.|.....|..|++.|.++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            3577777777777777777777776654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.19  E-value=7.9e-07  Score=38.84  Aligned_cols=26  Identities=35%  Similarity=0.774  Sum_probs=20.5

Q ss_pred             CccccCcchhccCChHHHHHHHHHhC
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHT   62 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~   62 (141)
                      ++|.|..|++.|.....|..|++.|.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            56888888888888888888877664

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.18  E-value=1.7e-06  Score=39.07  Aligned_cols=28  Identities=29%  Similarity=0.638  Sum_probs=21.1

Q ss_pred             CccccC--cchhccCChHHHHHHHHHhCCC
Q psy17779         37 KKFNCP--HCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        37 ~~~~C~--~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      ++|.|.  .|++.|.....|..|+++|.++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            567777  6888888888888887777654

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.17  E-value=6.8e-07  Score=38.89  Aligned_cols=26  Identities=23%  Similarity=0.667  Sum_probs=21.0

Q ss_pred             CCccccCcchhccCChHHHHHHHHHh
Q psy17779         36 PKKFNCPHCNVAFSNNGQLKGHIRIH   61 (141)
Q Consensus        36 ~~~~~C~~C~~~f~~~~~l~~h~~~h   61 (141)
                      ++||.|..|++.|...+.|..|++.|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            35788888888888888888888765

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=1.1e-06  Score=41.26  Aligned_cols=30  Identities=23%  Similarity=0.496  Sum_probs=20.6

Q ss_pred             CCCCccccCcchhccCChHHHHHH-HHHhCC
Q psy17779         34 QRPKKFNCPHCNVAFSNNGQLKGH-IRIHTG   63 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f~~~~~l~~h-~~~h~~   63 (141)
                      .+++||.|..|++.|.....|..| ++.|.+
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            5 SSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            456677777777777777777777 666654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.16  E-value=1.4e-06  Score=39.04  Aligned_cols=27  Identities=41%  Similarity=0.813  Sum_probs=18.5

Q ss_pred             ccccC--cchhccCChHHHHHHHHHhCCC
Q psy17779         38 KFNCP--HCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        38 ~~~C~--~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      ||.|.  .|++.|.....|..|+++|.++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            56676  6777777777777777766654

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.16  E-value=9.9e-07  Score=44.15  Aligned_cols=32  Identities=28%  Similarity=0.515  Sum_probs=20.6

Q ss_pred             CCCCccccCcchhccCChHHHHHHHH-HhCCCC
Q psy17779         34 QRPKKFNCPHCNVAFSNNGQLKGHIR-IHTGER   65 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~~   65 (141)
                      .++++|.|..|++.|.....|..|++ .|.++.
T Consensus         3 t~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            3 DRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             TTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            35566777777777777777777776 666543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.16  E-value=1.8e-06  Score=46.34  Aligned_cols=33  Identities=18%  Similarity=0.360  Sum_probs=26.9

Q ss_pred             cCCCCccccCcchhccCChHHHHHHHHHhCCCC
Q psy17779         33 NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGER   65 (141)
Q Consensus        33 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   65 (141)
                      ..+++||.|.+|++.|.....|..|+++|++..
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            456788888888888888888888888888754

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.16  E-value=3.7e-08  Score=45.04  Aligned_cols=29  Identities=28%  Similarity=0.502  Sum_probs=16.5

Q ss_pred             ccccCcchhccCChHHHHHHHHHhCCCCC
Q psy17779         38 KFNCPHCNVAFSNNGQLKGHIRIHTGERP   66 (141)
Q Consensus        38 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   66 (141)
                      ||.|..|++.|...+.|..|+++|.++++
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            45555566655555555555555555544

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.15  E-value=1.5e-06  Score=40.77  Aligned_cols=31  Identities=32%  Similarity=0.725  Sum_probs=20.2

Q ss_pred             CCCCccccCc--chhccCChHHHHHHHHHhCCC
Q psy17779         34 QRPKKFNCPH--CNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        34 ~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      .++++|.|.+  |++.|.....|..|++.|.++
T Consensus         4 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            3556677763  777777777777776666554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.13  E-value=9.3e-06  Score=43.27  Aligned_cols=50  Identities=22%  Similarity=0.440  Sum_probs=25.2

Q ss_pred             ccCCccCcccCChHhHHHHH-HHhCCCC------CeeCc--cchhccCChHHHHHHHHh
Q psy17779         69 CDAENCGKSFTRNEELTRHK-RIHSGLR------PYPCT--HCGKKFGRKDHLKKHLRT  118 (141)
Q Consensus        69 c~~~~C~~~~~~~~~l~~h~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~  118 (141)
                      |.+..|++.|.+...|..|+ ..|.+.+      +|.|.  .|++.+.....|..|+++
T Consensus         4 C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            4 CKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             EeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            44444555555555555554 2444333      45554  355555555555555554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.38  E-value=3.9e-07  Score=39.24  Aligned_cols=26  Identities=42%  Similarity=1.004  Sum_probs=21.6

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhC
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHF  120 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~  120 (141)
                      +||.|..|++.|...+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47888889999988888888888763

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.38  E-value=3.9e-07  Score=40.25  Aligned_cols=28  Identities=43%  Similarity=0.785  Sum_probs=20.9

Q ss_pred             CccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      ++|.|..|++.|.....|..|++.|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3577888888888888888887777654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.09  E-value=1.7e-06  Score=37.36  Aligned_cols=26  Identities=27%  Similarity=0.694  Sum_probs=17.7

Q ss_pred             ccccCcchhccCChHHHHHHHHHhCC
Q psy17779         38 KFNCPHCNVAFSNNGQLKGHIRIHTG   63 (141)
Q Consensus        38 ~~~C~~C~~~f~~~~~l~~h~~~h~~   63 (141)
                      +|.|..|++.|.....|..|++.|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            36677777777777777777766654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.37  E-value=4.3e-07  Score=40.33  Aligned_cols=28  Identities=50%  Similarity=1.037  Sum_probs=21.5

Q ss_pred             CccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      ++|.|..|++.|.....|..|++.|.++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            5678888888888888888887777653

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.06  E-value=2.6e-06  Score=37.29  Aligned_cols=27  Identities=30%  Similarity=0.760  Sum_probs=23.2

Q ss_pred             CCeeCc--cchhccCChHHHHHHHHhhCC
Q psy17779         95 RPYPCT--HCGKKFGRKDHLKKHLRTHFP  121 (141)
Q Consensus        95 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  121 (141)
                      +||.|.  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            478899  899999999999999998864

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.04  E-value=3.5e-07  Score=45.59  Aligned_cols=29  Identities=28%  Similarity=0.614  Sum_probs=14.6

Q ss_pred             CCCccccC--cchhccCChHHHHHHHHHhCC
Q psy17779         35 RPKKFNCP--HCNVAFSNNGQLKGHIRIHTG   63 (141)
Q Consensus        35 ~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~   63 (141)
                      ++++|.|.  .|++.|.....|..|++.|.+
T Consensus        15 ~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           15 PDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             TTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             CCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            44455553  355555555555555555444

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.00  E-value=2.7e-06  Score=37.57  Aligned_cols=27  Identities=37%  Similarity=0.770  Sum_probs=18.8

Q ss_pred             ccccCcchhccCChHHHHHH-HHHhCCC
Q psy17779         38 KFNCPHCNVAFSNNGQLKGH-IRIHTGE   64 (141)
Q Consensus        38 ~~~C~~C~~~f~~~~~l~~h-~~~h~~~   64 (141)
                      +|.|..|++.|.....|..| ++.|.++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            57777777777777777777 4566543

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.24  E-value=8.7e-07  Score=38.04  Aligned_cols=25  Identities=40%  Similarity=0.798  Sum_probs=20.0

Q ss_pred             CccccCcchhccCChHHHHHHHHHh
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIH   61 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h   61 (141)
                      +||.|..|++.|.....|..|++.|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4678888888888888888887765

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.99  E-value=1.9e-05  Score=42.02  Aligned_cols=51  Identities=20%  Similarity=0.324  Sum_probs=43.5

Q ss_pred             cCcchhccCChHHHHHHHH-HhCCCC------CccccCCccCcccCChHhHHHHHHHh
Q psy17779         41 CPHCNVAFSNNGQLKGHIR-IHTGER------PYKCDAENCGKSFTRNEELTRHKRIH   91 (141)
Q Consensus        41 C~~C~~~f~~~~~l~~h~~-~h~~~~------~~~c~~~~C~~~~~~~~~l~~h~~~h   91 (141)
                      ...|++.|.+...|..|+. .|.+.+      +|.|.+..|++.+.....|..|++..
T Consensus         6 W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            6 WKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             eCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            4459999999999999985 676654      79999999999999999999998864

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.83  E-value=9.1e-06  Score=35.41  Aligned_cols=26  Identities=31%  Similarity=0.721  Sum_probs=20.7

Q ss_pred             CccccC--cchhccCChHHHHHHHHHhC
Q psy17779         37 KKFNCP--HCNVAFSNNGQLKGHIRIHT   62 (141)
Q Consensus        37 ~~~~C~--~C~~~f~~~~~l~~h~~~h~   62 (141)
                      ++|.|.  .|++.|.....|..|++.|.
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            357788  88888888888888887765

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.98  E-value=0.00014  Score=43.61  Aligned_cols=30  Identities=27%  Similarity=0.408  Sum_probs=26.0

Q ss_pred             HHhCCCCCeeCccchhccCChHHHHHHHHh
Q psy17779         89 RIHSGLRPYPCTHCGKKFGRKDHLKKHLRT  118 (141)
Q Consensus        89 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  118 (141)
                      .-|+|++||.|..|++.|.+.+.|..|+++
T Consensus        43 ed~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           43 PDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            457788899999999999999999999765

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.90  E-value=0.00088  Score=40.50  Aligned_cols=79  Identities=18%  Similarity=0.249  Sum_probs=49.8

Q ss_pred             CCccccCcchhccCChHHHHHHHH--HhCCC-CCcccc----CCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCC
Q psy17779         36 PKKFNCPHCNVAFSNNGQLKGHIR--IHTGE-RPYKCD----AENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGR  108 (141)
Q Consensus        36 ~~~~~C~~C~~~f~~~~~l~~h~~--~h~~~-~~~~c~----~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~  108 (141)
                      .+++.|..|...|.+...+..|..  .|... +.+.+.    .+.-+..+....    +...+.+.+.+.|..|+..|..
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCC
Confidence            456889999999999999999983  33211 111110    000111221111    1223556678999999999999


Q ss_pred             hHHHHHHHHh
Q psy17779        109 KDHLKKHLRT  118 (141)
Q Consensus       109 ~~~l~~H~~~  118 (141)
                      ...+..|...
T Consensus       106 ~~~~~~H~~g  115 (127)
T 1zu1_A          106 PVVAESHYIG  115 (127)
T ss_dssp             HHHHHHHHTS
T ss_pred             HHHHHHHHCC
Confidence            9999999753

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.45  E-value=0.0028  Score=38.00  Aligned_cols=27  Identities=26%  Similarity=0.400  Sum_probs=21.7

Q ss_pred             cCCCCccccCcchhccCChHHHHHHHH
Q psy17779         33 NQRPKKFNCPHCNVAFSNNGQLKGHIR   59 (141)
Q Consensus        33 ~~~~~~~~C~~C~~~f~~~~~l~~h~~   59 (141)
                      +.++++|.|..|++.|.+...|..|++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHh
Confidence            456778888888888888888888865

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.06  E-value=0.016  Score=28.35  Aligned_cols=24  Identities=33%  Similarity=0.742  Sum_probs=21.5

Q ss_pred             CccccCcchhccCChHHHHHHHHH
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRI   60 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~   60 (141)
                      ..|.|+.|+..|.....|+.||+-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            568899999999999999999973

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.02  E-value=0.064  Score=26.22  Aligned_cols=27  Identities=22%  Similarity=0.500  Sum_probs=19.8

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhCC
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHFP  121 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  121 (141)
                      .++.|..|+..|.....|+.|++-.-+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp   37 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCP   37 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCc
Confidence            457788888888888888888874433

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.12  E-value=0.13  Score=32.25  Aligned_cols=56  Identities=14%  Similarity=0.273  Sum_probs=27.9

Q ss_pred             CccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCCCCc
Q psy17779         66 PYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPRY  125 (141)
Q Consensus        66 ~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  125 (141)
                      +..|+  .|+..+ ....+..|....=..++..|..|+..+.. ..+..|..++.|+.++
T Consensus       110 ~v~C~--~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          110 LMDCP--QCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             EEECT--TTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC----
T ss_pred             eeECC--CCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcChhhh
Confidence            33443  565544 33455666554444555666666654433 3456666666665543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=90.85  E-value=0.2  Score=22.72  Aligned_cols=24  Identities=25%  Similarity=0.559  Sum_probs=20.2

Q ss_pred             cccCcchhccCChHHHHHHHHHhC
Q psy17779         39 FNCPHCNVAFSNNGQLKGHIRIHT   62 (141)
Q Consensus        39 ~~C~~C~~~f~~~~~l~~h~~~h~   62 (141)
                      |.|+.|.+.|.+...|..|....+
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcc
Confidence            789999999999999999986533

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=88.70  E-value=0.72  Score=21.07  Aligned_cols=26  Identities=15%  Similarity=0.214  Sum_probs=19.7

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhC
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHF  120 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~  120 (141)
                      ..+.|..|+-+|.....+..|.+-.-
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~YC   32 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQFYC   32 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHHTS
T ss_pred             CcCeeccccceehhhHHHhhhheecC
Confidence            45778888888888888888876543

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=88.06  E-value=0.24  Score=27.59  Aligned_cols=26  Identities=38%  Similarity=0.724  Sum_probs=16.5

Q ss_pred             CeeCccchhccCChHHHHHHHHhhCCCCC
Q psy17779         96 PYPCTHCGKKFGRKDHLKKHLRTHFPQPR  124 (141)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  124 (141)
                      .+.|-+||+.|..   |.+|++.++|..|
T Consensus        21 ~iiClecGK~fK~---LkRHL~~~hgltp   46 (87)
T 2jsp_A           21 HIVCLECGGSFKS---LKRHLTTHHSMTP   46 (87)
T ss_dssp             CEECTBTCCEESB---HHHHHHHTTCSCH
T ss_pred             ceEecccchhhHH---HHHHHHHccCCCH
Confidence            4567777776664   5577777656544

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=86.89  E-value=0.37  Score=30.16  Aligned_cols=58  Identities=22%  Similarity=0.392  Sum_probs=41.4

Q ss_pred             CCCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCCC
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLRP   96 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~   96 (141)
                      ...+..|+.|+..+ ....|..|....-..+...|.  .|+..+... .+..|...+.|+.+
T Consensus       107 ~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~--~C~~~~~~~-~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          107 EFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCD--NCAASMAFE-DKEIHDQNCPLALE  164 (170)
T ss_dssp             TTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECT--TTCCEEEGG-GHHHHHTTCCC---
T ss_pred             CceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECC--CCCCccCHH-HHHhHHHhCcChhh
Confidence            34556788898887 455588898766666777787  898876554 68999988888754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	141
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	6e-13
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-11
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-09
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	9e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-10
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-09
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	5e-10
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	9e-06
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.004
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-10
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-09
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.004
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	3e-09
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	3e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	3e-09
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	6e-09
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.002
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	3e-09
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-07
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	4e-09
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	2e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	4e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	7e-09
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	6e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-09
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-08
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-08
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	9e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-08
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	5e-08
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-04
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	4e-08
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	8e-06
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	5e-08
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	2e-04
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.004
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-07
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	6e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-06
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	5e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	5e-07
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-05
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	1e-05
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	3e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	1e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	5e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	8e-05
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	5e-04
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	9e-04
d1bhia_	38	g.37.1.1 (A:) Transactivation domain of cre-bp1/at	7e-04

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 6e-13
 Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 3/56 (5%)

Query: 64  ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
           ++ Y C    CGKSFT   +  RH  +H GLRPY C  CGKKF  K HL  H++ H
Sbjct: 1   DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 3e-06
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH 91
          K + C  C  +F++  Q   H+ +H G RPY C    CGK F     L  H +IH
Sbjct: 2  KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCG--VCGKKFKMKHHLVGHMKIH 53

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (126), Expect = 4e-11
 Identities = 17/34 (50%), Positives = 26/34 (76%), Gaps = 2/34 (5%)

Query: 60 IHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
          IH+GE+PY C    CGK+F+R+  L +H+R+H+G
Sbjct: 1  IHSGEKPYGC--VECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (114), Expect = 2e-09
 Identities = 16/30 (53%), Positives = 18/30 (60%)

Query: 90  IHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
           IHSG +PY C  CGK F R   L +H R H
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (82), Expect = 9e-05
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGE 64
          K + C  C  AFS +  L  H R+HTGE
Sbjct: 6  KPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.9 bits (122), Expect = 1e-10
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 56 GHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH 91
          G  R  TG +P++C   +C +SF+R++ L  H++ H
Sbjct: 1  GSTRGSTGIKPFQCP--DCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.4 bits (113), Expect = 3e-09
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 87  HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
             R  +G++P+ C  C + F R DHL  H + H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.2 bits (118), Expect = 5e-10
 Identities = 15/30 (50%), Positives = 19/30 (63%)

Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
          +RPY CD   C K+F RN +L RHK+ H  
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.1 bits (89), Expect = 9e-06
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 95  RPYPCTH--CGKKFGRKDHLKKHLRTH 119
           RPY C H  C K F R   L +H ++H
Sbjct: 2   RPYSCDHPGCDKAFVRNHDLIRHKKSH 28

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 31.1 bits (71), Expect = 0.004
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGE 64
          RP   + P C+ AF  N  L  H + H  +
Sbjct: 2  RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (117), Expect = 8e-10
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)

Query: 59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
          R HTGE+PY C   +C K+F + + L  H + +  
Sbjct: 1  RTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (112), Expect = 5e-09
 Identities = 13/31 (41%), Positives = 19/31 (61%)

Query: 89  RIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
           R H+G +PY C+HC K F +K  L  H + +
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.2 bits (71), Expect = 0.004
 Identities = 7/28 (25%), Positives = 11/28 (39%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGE 64
          K + C HC+  F     L  H + +   
Sbjct: 7  KPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.3 bits (113), Expect = 3e-09
 Identities = 16/29 (55%), Positives = 22/29 (75%)

Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHSG 93
          RPY C  E+C + F+R+ +LTRH RIH+G
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.5 bits (85), Expect = 3e-05
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 95  RPYPCTH--CGKKFGRKDHLKKHLRTH 119
           RPY C    C ++F R   L +H+R H
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIH 27

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (112), Expect = 3e-09
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)

Query: 57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
                  R YKC  + CGKSF+ + +L++H+R H+G
Sbjct: 3  SEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (111), Expect = 6e-09
 Identities = 14/34 (41%), Positives = 15/34 (44%)

Query: 86  RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
           R +      R Y C  CGK F     L KH RTH
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.1 bits (73), Expect = 0.002
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGE 64
          +++ C  C  +FS++  L  H R HTGE
Sbjct: 11 RRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (112), Expect = 3e-09
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 67 YKCDAENCGKSFTRNEELTRHKRIHSGLRPYPC 99
          + C    CGKSF   + L  H ++HS  R Y C
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (101), Expect = 2e-07
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 40 NCPHCNVAFSNNGQLKGHIRIHTGERPYKCD 70
            P C  +F+    LK H+++H+  R Y C+
Sbjct: 5  PEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (112), Expect = 4e-09
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHSG 93
          +P+KC  E C KS++R E L  H R H+G
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 2e-05
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)

Query: 95  RPYPCTH--CGKKFGRKDHLKKHLRTH 119
           +P+ CT   C K + R ++LK HLR+H
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSH 27

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 4e-04
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGE 64
          +P K     C  ++S    LK H+R HTGE
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (110), Expect = 7e-09
 Identities = 17/29 (58%), Positives = 21/29 (72%)

Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHSG 93
          RP+ C    CGK FTR++EL RHKR H+G
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTG 29

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 3e-05
 Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 2/27 (7%)

Query: 95  RPYPCTH--CGKKFGRKDHLKKHLRTH 119
           RP+ CT   CGK+F R D L++H RTH
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTH 27

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (84), Expect = 6e-05
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGER 65
          RP      +C   F+ + +L+ H R HTGE+
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (110), Expect = 8e-09
 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 3/36 (8%)

Query: 59 RIHTGERPYKCDAENCGKSFTRNEELTRHK-RIHSG 93
          R H+GE+PY+C    C   FT++  +  H  + H+ 
Sbjct: 1  RTHSGEKPYECY--ICHARFTQSGTMKMHILQKHTE 34

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (108), Expect = 2e-08
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 89  RIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
           R HSG +PY C  C  +F +   +K H+   
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.9 bits (106), Expect = 3e-08
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 52 GQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
          G +  +++    ++ ++C    C K+F R   +  H + H  
Sbjct: 5  GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE 45

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.4 bits (76), Expect = 9e-04
 Identities = 9/42 (21%), Positives = 18/42 (42%)

Query: 24 SHEQSMKAKNQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGER 65
          S ++ +K    +  +   P C   F     ++ HI+ H  +R
Sbjct: 6  SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (106), Expect = 4e-08
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIR-IHTGERPYKCD 70
          K + C  C   FS    L GHI+ +HT ERP+KC 
Sbjct: 4  KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (105), Expect = 5e-08
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 3/39 (7%)

Query: 62 TGERPYKCDAENCGKSFTRNEELTRH-KRIHSGLRPYPC 99
          +  +PY C  ++CGK F+R + L  H K++H+  RP+ C
Sbjct: 1  SVGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 1e-04
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 92  SGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
           S  +PY C  CGK F R DHL  H++  
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQV 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (105), Expect = 4e-08
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHS 92
          RPY C  + C K F ++  L  H   H+
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 8e-06
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 95  RPYPCTH--CGKKFGRKDHLKKHLRTH 119
           RPY C    C KKF +  +LK H+ TH
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTH 27

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (104), Expect = 5e-08
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHSG 93
          +P++C  E CGK F+ +  L  H RIH+G
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)

Query: 95  RPYPCTH--CGKKFGRKDHLKKHLRTH 119
           +P+ CT   CGK+F    +L+ H+R H
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIH 27

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.2 bits (71), Expect = 0.004
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 35 RPKKFNCPHCNVAFSNNGQLKGHIRIHTGE 64
          +P +     C   FS +  L+ H+RIHTG+
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.2 bits (102), Expect = 1e-07
 Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 61 HTGERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
           +G+RP+ C    C  +FT      RH ++H+ 
Sbjct: 2  SSGKRPFVC--RICLSAFTTKANCARHLKVHTD 32

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.3 bits (97), Expect = 6e-07
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 91  HSGLRPYPCTHCGKKFGRKDHLKKHLRTH 119
            SG RP+ C  C   F  K +  +HL+ H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.2 bits (100), Expect = 2e-07
 Identities = 11/30 (36%), Positives = 21/30 (70%), Gaps = 2/30 (6%)

Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIHSG 93
          ++P++C    C ++F+R++ LT H R H+G
Sbjct: 1  QKPFQC--RICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.9 bits (94), Expect = 2e-06
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 95  RPYPCTHCGKKFGRKDHLKKHLRTH 119
           +P+ C  C + F R DHL  H+RTH
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTH 26

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.4 bits (77), Expect = 5e-04
 Identities = 13/27 (48%), Positives = 14/27 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTG 63
          K F C  C   FS +  L  HIR HTG
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 41.5 bits (98), Expect = 5e-07
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 95  RPYPCTHCGKKFGRKDHLKKHLRTH 119
           R + C  C + F R++HLK+H R+H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 39.9 bits (94), Expect = 2e-06
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHSG 93
          R + C  E C ++F R E L RH R H+ 
Sbjct: 1  RSFVC--EVCTRAFARQEHLKRHYRSHTN 27

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 37.2 bits (87), Expect = 2e-05
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGER 65
          + F C  C  AF+    LK H R HT E+
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (89), Expect = 1e-05
 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 2/28 (7%)

Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHS 92
          +PYKC    CGK+F++N  L  H+RIH+
Sbjct: 1  KPYKC--LECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (85), Expect = 3e-05
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 95  RPYPCTHCGKKFGRKDHLKKHLRTH 119
           +PY C  CGK F +   L  H R H
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIH 25

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 1e-05
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 95  RPYPCTHCGKKFGRKDHLKKHLRTH 119
           + + C  C K+F R DHL KH++TH
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTH 25

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 5e-05
 Identities = 8/29 (27%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 65 RPYKCDAENCGKSFTRNEELTRHKRIHSG 93
          + + C    C K F R++ L++H + H  
Sbjct: 1  KKFAC--PECPKRFMRSDHLSKHIKTHQN 27

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 8e-05
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 37 KKFNCPHCNVAFSNNGQLKGHIRIHTGER 65
          KKF CP C   F  +  L  HI+ H  ++
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.3 bits (76), Expect = 5e-04
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)

Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIH 91
          E+P+ CD   CG+ F R++E  RH +IH
Sbjct: 1  EKPFACDI--CGRKFARSDERKRHTKIH 26

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.9 bits (75), Expect = 9e-04
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 95  RPYPCTHCGKKFGRKDHLKKHLRTHF 120
           +P+ C  CG+KF R D  K+H + H 
Sbjct: 2   KPFACDICGRKFARSDERKRHTKIHL 27

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.3 bits (76), Expect = 7e-04
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 64 ERPYKCDAENCGKSFTRNEELTRHKRIH 91
          ++P+ C A  CG+ FT  + L  HK  H
Sbjct: 4  DKPFLCTAPGCGQRFTNEDHLAVHKHKH 31

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	141
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.6
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.56
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.4
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.38
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.32
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.27
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.24
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.21
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.2
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.16
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.16
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.14
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.12
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.08
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.99
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.99
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.99
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.98
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.98
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.96
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.93
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.93
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.92
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.9
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.89
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.85
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.83
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.83
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.8
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.77
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.73
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.71
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.7
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.68
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.64
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.63
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.48
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.47
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.44
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.41
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.38
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.28
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.26
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.22
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.19
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.12
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.08
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.0
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.91
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.89
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.83
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.78
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.77
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.75
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.74
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.73
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.7
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.63
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.6
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.53
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.45
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.44
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.33
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.31
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.23
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.23
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.22
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.21
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.2
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.16
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.16
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.15
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.14
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.06
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.05
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.98
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.98
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.97
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.87
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.64
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.58
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.56
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.53
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.39
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.38
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.27
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.26
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.22
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.21
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.17
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.04
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	95.69
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.44
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.07
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.06
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.85
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.71
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.67
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.22
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.18
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.92
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.83
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.19
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	91.26
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	91.16
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.44
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	89.96
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	89.08
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	88.69
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	83.14
d1fu9a_	36	U-shaped transcription factor, different fingers {	80.67

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=6.2e-16  Score=79.33  Aligned_cols=53  Identities=51%  Similarity=1.043  Sum_probs=37.0

Q ss_pred             CCCccccCCccCcccCChHhHHHHHHHhCCCCCeeCccchhccCChHHHHHHHHhh
Q psy17779         64 ERPYKCDAENCGKSFTRNEELTRHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTH  119 (141)
Q Consensus        64 ~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  119 (141)
                      +++|.|   .||+.|.....|..|+++|++++||.|.+|+++|...+.|..|+++|
T Consensus         1 EK~y~C---~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC---QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC---TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC---CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            356666   27777777777777777777777777777777777777777777665

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.8e-15  Score=77.54  Aligned_cols=53  Identities=38%  Similarity=0.854  Sum_probs=50.4

Q ss_pred             CCccccCcchhccCChHHHHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHh
Q psy17779         36 PKKFNCPHCNVAFSNNGQLKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIH   91 (141)
Q Consensus        36 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h   91 (141)
                      ++||.| .||+.|.....|..|+++|.+++||.|.  .|++.|.....|..|++.|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~--~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCG--VCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECT--TTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCC--CcCCEecCHHHHHHHHhcC
Confidence            589999 5999999999999999999999999998  9999999999999999876

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=2.2e-14  Score=67.86  Aligned_cols=37  Identities=38%  Similarity=0.682  Sum_probs=34.6

Q ss_pred             HHHHHhCCCCCeeCccchhccCChHHHHHHHHhhCCC
Q psy17779         86 RHKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQ  122 (141)
Q Consensus        86 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  122 (141)
                      .|++.|++++||.|..|+++|...+.|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4778899999999999999999999999999999987

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.4e-13  Score=62.59  Aligned_cols=33  Identities=48%  Similarity=0.935  Sum_probs=31.2

Q ss_pred             HhCCCCCeeCccchhccCChHHHHHHHHhhCCC
Q psy17779         90 IHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQ  122 (141)
Q Consensus        90 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  122 (141)
                      +|++++||.|..|+++|.+.+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            489999999999999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=6.5e-13  Score=62.69  Aligned_cols=36  Identities=36%  Similarity=0.691  Sum_probs=31.4

Q ss_pred             CCCCeeCccchhccCChHHHHHHHH-hhCCCCCcccc
Q psy17779         93 GLRPYPCTHCGKKFGRKDHLKKHLR-THFPQPRYVSC  128 (141)
Q Consensus        93 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~  128 (141)
                      .+|||.|..|+++|...+.|..|++ +|++||||.|.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            4789999999999999999999965 79999999864

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=1.5e-12  Score=60.58  Aligned_cols=34  Identities=38%  Similarity=0.860  Sum_probs=31.3

Q ss_pred             HHhCCCCCeeCccchhccCChHHHHHHHHhhCCC
Q psy17779         89 RIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQ  122 (141)
Q Consensus        89 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  122 (141)
                      ++|+||+||.|..|+++|.+.+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4799999999999999999999999999999865

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=1.2e-12  Score=61.40  Aligned_cols=35  Identities=34%  Similarity=0.842  Sum_probs=32.0

Q ss_pred             HHHHhCCCCCeeCccchhccCChHHHHHHHHhhCC
Q psy17779         87 HKRIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFP  121 (141)
Q Consensus        87 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  121 (141)
                      |.+.|++|+||.|..|+++|.+.+.|..|+++|..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            56889999999999999999999999999999864

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.21  E-value=4.3e-12  Score=55.97  Aligned_cols=29  Identities=38%  Similarity=0.907  Sum_probs=26.6

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhCCCC
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      +||.|.+|+++|.+.+.|..|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            58999999999999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=5.5e-12  Score=57.96  Aligned_cols=32  Identities=34%  Similarity=0.671  Sum_probs=29.6

Q ss_pred             hCCCCCeeCccchhccCChHHHHHHHHhhCCC
Q psy17779         91 HSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQ  122 (141)
Q Consensus        91 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  122 (141)
                      |+|++||.|.+|++.|.+.+.|..|+++|+.+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68999999999999999999999999999765

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=8.3e-12  Score=54.94  Aligned_cols=29  Identities=41%  Similarity=0.907  Sum_probs=26.6

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhCCCC
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      |||.|..|+++|.+.+.|..|+++|+|||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58999999999999999999999999986

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.16  E-value=7.3e-12  Score=54.59  Aligned_cols=28  Identities=43%  Similarity=0.946  Sum_probs=26.0

Q ss_pred             CCCeeCccchhccCChHHHHHHHHhhCC
Q psy17779         94 LRPYPCTHCGKKFGRKDHLKKHLRTHFP  121 (141)
Q Consensus        94 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  121 (141)
                      ||||.|..|+++|.+.+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999976

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.2e-11  Score=57.34  Aligned_cols=34  Identities=32%  Similarity=0.728  Sum_probs=29.3

Q ss_pred             HHhCCCCCeeCccchhccCChHHHHHHHHhhCCC
Q psy17779         89 RIHSGLRPYPCTHCGKKFGRKDHLKKHLRTHFPQ  122 (141)
Q Consensus        89 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  122 (141)
                      ++|+||+||.|..|+++|.+.+.|..|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            4689999999999999999999999998765543

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=2.2e-11  Score=57.33  Aligned_cols=35  Identities=46%  Similarity=0.955  Sum_probs=24.6

Q ss_pred             CCccccCcchhccCChHHHHHHHH-HhCCCCCcccc
Q psy17779         36 PKKFNCPHCNVAFSNNGQLKGHIR-IHTGERPYKCD   70 (141)
Q Consensus        36 ~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~~~c~   70 (141)
                      ++||.|.+||+.|...+.|..|++ .|++++||.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            567777777777777777777764 57777777764

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.08  E-value=3.6e-12  Score=62.72  Aligned_cols=40  Identities=20%  Similarity=0.556  Sum_probs=34.5

Q ss_pred             hHHHHHHHhCCCCCeeCcc--chhccCChHHHHHHHHhhCCCC
Q psy17779         83 ELTRHKRIHSGLRPYPCTH--CGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        83 ~l~~h~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      .+..|+. |++++||.|.+  |+++|...+.|..|+++|+|||
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            3455664 89999999987  9999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.3e-10  Score=53.69  Aligned_cols=27  Identities=44%  Similarity=0.891  Sum_probs=11.5

Q ss_pred             ccCcccCChHhHHHHHHHhCCCCCeeC
Q psy17779         73 NCGKSFTRNEELTRHKRIHSGLRPYPC   99 (141)
Q Consensus        73 ~C~~~~~~~~~l~~h~~~h~~~~~~~C   99 (141)
                      .|++.|.....|..|++.|++++||.|
T Consensus         8 ~C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           8 ACGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             TTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             CCCCeeCChhHhccccCeeCCCCCEeC
Confidence            344444444444444444444444443

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.5e-10  Score=52.38  Aligned_cols=32  Identities=41%  Similarity=0.745  Sum_probs=21.5

Q ss_pred             cCCCCccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         33 NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        33 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      +.+++||.|.+|+++|...+.|..|+++|+++
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            34666777777777777777777777766653

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.99  E-value=9.4e-11  Score=50.97  Aligned_cols=28  Identities=46%  Similarity=0.826  Sum_probs=23.9

Q ss_pred             CCccccCcchhccCChHHHHHHHHHhCC
Q psy17779         36 PKKFNCPHCNVAFSNNGQLKGHIRIHTG   63 (141)
Q Consensus        36 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~   63 (141)
                      ++||.|.+|++.|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5788899999999998888888888865

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=8.9e-11  Score=49.86  Aligned_cols=26  Identities=42%  Similarity=0.933  Sum_probs=24.0

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhC
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHF  120 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~  120 (141)
                      |||.|..||++|...+.|..|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68999999999999999999999984

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.98  E-value=1.7e-10  Score=50.70  Aligned_cols=29  Identities=41%  Similarity=0.783  Sum_probs=21.5

Q ss_pred             CccccCcchhccCChHHHHHHHHHhCCCC
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHTGER   65 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   65 (141)
                      +||.|.+|++.|...+.|..|+++|++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            46777777777777777777777777653

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=2.7e-10  Score=49.99  Aligned_cols=29  Identities=38%  Similarity=0.855  Sum_probs=23.1

Q ss_pred             CccccCcchhccCChHHHHHHHHHhCCCC
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHTGER   65 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   65 (141)
                      +||.|.+|++.|.+.+.|..|+++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            57888888888888888888888887763

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=3e-10  Score=50.11  Aligned_cols=28  Identities=43%  Similarity=0.888  Sum_probs=20.5

Q ss_pred             CCeeCcc--chhccCChHHHHHHHHhhCCC
Q psy17779         95 RPYPCTH--CGKKFGRKDHLKKHLRTHFPQ  122 (141)
Q Consensus        95 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  122 (141)
                      |||.|.+  |+++|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4677766  777777777777777777765

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=9.3e-11  Score=55.08  Aligned_cols=36  Identities=42%  Similarity=0.877  Sum_probs=18.2

Q ss_pred             HHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCC
Q psy17779         57 HIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGL   94 (141)
Q Consensus        57 h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~   94 (141)
                      |+++|.+++||.|.  .|++.|...+.|..|+++|+||
T Consensus         3 H~~~Ht~ekpy~C~--~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCD--ECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCS--SSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEecC--CCCceeeCHHHHHHhCccCCCC
Confidence            33445555555554  4555555555555555555543

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=2.4e-10  Score=52.76  Aligned_cols=32  Identities=38%  Similarity=0.840  Sum_probs=29.5

Q ss_pred             eeCcc--chhccCChHHHHHHHHhhCCCCCcccc
Q psy17779         97 YPCTH--CGKKFGRKDHLKKHLRTHFPQPRYVSC  128 (141)
Q Consensus        97 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~  128 (141)
                      |.|..  |+++|.....|.+|+++|+|+|||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67876  999999999999999999999999874

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=3.5e-10  Score=50.00  Aligned_cols=28  Identities=39%  Similarity=0.920  Sum_probs=21.3

Q ss_pred             CCeeCcc--chhccCChHHHHHHHHhhCCC
Q psy17779         95 RPYPCTH--CGKKFGRKDHLKKHLRTHFPQ  122 (141)
Q Consensus        95 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  122 (141)
                      |||.|.+  |+++|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5777766  778888888888888777775

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.89  E-value=5.8e-10  Score=51.02  Aligned_cols=32  Identities=25%  Similarity=0.583  Sum_probs=24.7

Q ss_pred             cCCCCccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         33 NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        33 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      +.+++||.|.+|++.|.+.++|..|++.|...
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            35778888888888888888888888877654

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=1.1e-09  Score=50.68  Aligned_cols=32  Identities=22%  Similarity=0.508  Sum_probs=20.8

Q ss_pred             cCCCCccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         33 NQRPKKFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        33 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      +.+++||.|.+|+++|...+.|..|++.|+++
T Consensus         3 HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            44666666666666666666666666666543

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=1e-09  Score=48.84  Aligned_cols=29  Identities=52%  Similarity=1.024  Sum_probs=18.5

Q ss_pred             CCeeCc--cchhccCChHHHHHHHHhhCCCC
Q psy17779         95 RPYPCT--HCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        95 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      +||.|.  .|+++|...+.|..|+++|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            456664  36666666666666666666664

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=6.5e-10  Score=47.12  Aligned_cols=26  Identities=50%  Similarity=0.864  Sum_probs=22.4

Q ss_pred             CccccCcchhccCChHHHHHHHHHhC
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHT   62 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~   62 (141)
                      +||+|.+||++|...+.|.+|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            58899999999999999999988874

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=2.7e-09  Score=47.42  Aligned_cols=30  Identities=53%  Similarity=1.071  Sum_probs=19.0

Q ss_pred             CccccCCccCcccCChHhHHHHHHHhCCCC
Q psy17779         66 PYKCDAENCGKSFTRNEELTRHKRIHSGLR   95 (141)
Q Consensus        66 ~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~   95 (141)
                      ||.|+++.|++.|...+.|..|++.|+||+
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            566655566666666666666666666653

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.77  E-value=1.4e-10  Score=56.88  Aligned_cols=41  Identities=20%  Similarity=0.467  Sum_probs=26.5

Q ss_pred             HHHHHHHhCCCCCccccCCccCcccCChHhHHHHHHHhCCCC
Q psy17779         54 LKGHIRIHTGERPYKCDAENCGKSFTRNEELTRHKRIHSGLR   95 (141)
Q Consensus        54 l~~h~~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~~~~   95 (141)
                      |..|+. |.+++||.|.++.|++.|...+.|..|++.|+|++
T Consensus         7 l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            344443 66677777764457777777777777777777664

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=7.3e-09  Score=45.54  Aligned_cols=29  Identities=48%  Similarity=0.833  Sum_probs=15.1

Q ss_pred             CccccCCccCcccCChHhHHHHHHHhCCC
Q psy17779         66 PYKCDAENCGKSFTRNEELTRHKRIHSGL   94 (141)
Q Consensus        66 ~~~c~~~~C~~~~~~~~~l~~h~~~h~~~   94 (141)
                      ||.|.++.|++.|...+.|..|++.|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            44555444555555555555555555543

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.71  E-value=3e-09  Score=49.45  Aligned_cols=32  Identities=38%  Similarity=0.895  Sum_probs=16.0

Q ss_pred             HHhCCCCCccccCCccCcccCChHhHHHHHHHhC
Q psy17779         59 RIHTGERPYKCDAENCGKSFTRNEELTRHKRIHS   92 (141)
Q Consensus        59 ~~h~~~~~~~c~~~~C~~~~~~~~~l~~h~~~h~   92 (141)
                      +.|++++||.|.  .|++.|...+.|..|++.|.
T Consensus         4 R~HTgeKPy~C~--~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           4 RGSTGIKPFQCP--DCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             STTCCSSSBCCT--TTCCCBSSHHHHHHHHGGGT
T ss_pred             CccCCccCeEeC--CCCCEecCHHHHHHHHhcCc
Confidence            344555555554  45555555555555554443

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=6.6e-09  Score=47.86  Aligned_cols=30  Identities=27%  Similarity=0.582  Sum_probs=19.6

Q ss_pred             cCCCCccccCcchhccCChHHHHHHHHHhC
Q psy17779         33 NQRPKKFNCPHCNVAFSNNGQLKGHIRIHT   62 (141)
Q Consensus        33 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~   62 (141)
                      +.+++||.|.+|++.|...++|+.|++.++
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            446667777777777777777777765443

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=6e-09  Score=45.90  Aligned_cols=28  Identities=46%  Similarity=1.007  Sum_probs=13.9

Q ss_pred             CccccCCccCcccCChHhHHHHHHHhCC
Q psy17779         66 PYKCDAENCGKSFTRNEELTRHKRIHSG   93 (141)
Q Consensus        66 ~~~c~~~~C~~~~~~~~~l~~h~~~h~~   93 (141)
                      ||.|.++.|++.|...+.|..|++.|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCC
Confidence            4444444455555555555555555544

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.64  E-value=5e-09  Score=45.69  Aligned_cols=27  Identities=41%  Similarity=1.002  Sum_probs=18.4

Q ss_pred             CCeeCcc--chhccCChHHHHHHHHhhCC
Q psy17779         95 RPYPCTH--CGKKFGRKDHLKKHLRTHFP  121 (141)
Q Consensus        95 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  121 (141)
                      |||.|.+  |+++|...+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4667765  77777777777777777654

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.63  E-value=1.2e-08  Score=45.51  Aligned_cols=28  Identities=43%  Similarity=0.880  Sum_probs=19.8

Q ss_pred             CCCeeCcc--chhccCChHHHHHHHHhhCC
Q psy17779         94 LRPYPCTH--CGKKFGRKDHLKKHLRTHFP  121 (141)
Q Consensus        94 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  121 (141)
                      |+||.|..  |+++|...+.|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46777766  77777777777777777754

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=2.2e-08  Score=43.11  Aligned_cols=25  Identities=52%  Similarity=1.076  Sum_probs=13.6

Q ss_pred             CCeeCcc--chhccCChHHHHHHHHhh
Q psy17779         95 RPYPCTH--CGKKFGRKDHLKKHLRTH  119 (141)
Q Consensus        95 ~~~~C~~--C~~~f~~~~~l~~H~~~h  119 (141)
                      +||.|..  |+++|...+.|.+|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            3455554  555555555555555555

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.47  E-value=3.7e-08  Score=42.85  Aligned_cols=28  Identities=54%  Similarity=1.179  Sum_probs=15.2

Q ss_pred             CccccCCccCcccCChHhHHHHHHHhCC
Q psy17779         66 PYKCDAENCGKSFTRNEELTRHKRIHSG   93 (141)
Q Consensus        66 ~~~c~~~~C~~~~~~~~~l~~h~~~h~~   93 (141)
                      ||.|.++.|++.|...+.|..|++.|+|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4555545555555555555555555543

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.44  E-value=1.2e-07  Score=42.19  Aligned_cols=28  Identities=54%  Similarity=1.123  Sum_probs=13.6

Q ss_pred             CCccccCCccCcccCChHhHHHHHHHhC
Q psy17779         65 RPYKCDAENCGKSFTRNEELTRHKRIHS   92 (141)
Q Consensus        65 ~~~~c~~~~C~~~~~~~~~l~~h~~~h~   92 (141)
                      +||.|.+++|++.|...+.|..|++.|+
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            3444444445555555555555554443

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=7.4e-08  Score=41.41  Aligned_cols=26  Identities=35%  Similarity=0.798  Sum_probs=15.4

Q ss_pred             CccccCCccCcccCChHhHHHHHHHh
Q psy17779         66 PYKCDAENCGKSFTRNEELTRHKRIH   91 (141)
Q Consensus        66 ~~~c~~~~C~~~~~~~~~l~~h~~~h   91 (141)
                      ||.|.++.|++.|...++|..|++.|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            55555555666666666666666555

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=1.4e-07  Score=38.98  Aligned_cols=29  Identities=31%  Similarity=0.583  Sum_probs=25.9

Q ss_pred             CCCeeCccchhccCChHHHHHHHHhhCCC
Q psy17779         94 LRPYPCTHCGKKFGRKDHLKKHLRTHFPQ  122 (141)
Q Consensus        94 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  122 (141)
                      ++||+|+.|..+-.+.+.|.-|.|.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57999999999999999999999999874

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.28  E-value=3.2e-07  Score=38.15  Aligned_cols=27  Identities=41%  Similarity=1.013  Sum_probs=23.8

Q ss_pred             CCCeeCccchhccCChHHHHHHHHhhC
Q psy17779         94 LRPYPCTHCGKKFGRKDHLKKHLRTHF  120 (141)
Q Consensus        94 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  120 (141)
                      |+||.|.+|++.|..+....+|.++|-
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999988874

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=2.5e-07  Score=37.25  Aligned_cols=26  Identities=42%  Similarity=0.833  Sum_probs=19.3

Q ss_pred             ccccCcchhccCChHHHHHHHHHhCC
Q psy17779         38 KFNCPHCNVAFSNNGQLKGHIRIHTG   63 (141)
Q Consensus        38 ~~~C~~C~~~f~~~~~l~~h~~~h~~   63 (141)
                      |++|..|++.|..+..|+.|++.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45677788888888888888777654

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=4.8e-07  Score=39.04  Aligned_cols=31  Identities=32%  Similarity=0.620  Sum_probs=22.2

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhCCCCCc
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHFPQPRY  125 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  125 (141)
                      +...|..||++|..--.|.+|.-+|.+||||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            3456777777777777777777777777776

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=5.5e-07  Score=36.23  Aligned_cols=26  Identities=54%  Similarity=0.971  Sum_probs=18.2

Q ss_pred             CeeCccchhccCChHHHHHHHHhhCC
Q psy17779         96 PYPCTHCGKKFGRKDHLKKHLRTHFP  121 (141)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~h~~  121 (141)
                      |.+|..|++.|+....|..|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45677777777777777777777764

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=1.3e-06  Score=36.84  Aligned_cols=29  Identities=31%  Similarity=0.825  Sum_probs=24.7

Q ss_pred             CCccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         36 PKKFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        36 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      ++||.|+.|...|..+..|.-|.+.|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            47889999999999999888898888764

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1.6e-06  Score=35.52  Aligned_cols=26  Identities=35%  Similarity=0.650  Sum_probs=20.6

Q ss_pred             eeCccchhccCChHHHHHHHHhhCCC
Q psy17779         97 YPCTHCGKKFGRKDHLKKHLRTHFPQ  122 (141)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~h~~~  122 (141)
                      ..|..||++|...+.|.+|+-+|+||
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46778888888888888888888775

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=2.8e-06  Score=35.73  Aligned_cols=27  Identities=33%  Similarity=0.801  Sum_probs=18.5

Q ss_pred             CCeeCcc--chhccCChHHHHHHHHhhCC
Q psy17779         95 RPYPCTH--CGKKFGRKDHLKKHLRTHFP  121 (141)
Q Consensus        95 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  121 (141)
                      +||.|+.  |++++..++.|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4667765  77777777777777776554

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=5e-06  Score=34.39  Aligned_cols=27  Identities=41%  Similarity=0.749  Sum_probs=18.1

Q ss_pred             eeCccchhccCChHHHHHHHHhhCCCC
Q psy17779         97 YPCTHCGKKFGRKDHLKKHLRTHFPQP  123 (141)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  123 (141)
                      |.|..|+....-++-|..|+|+|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            556666666667777777777776654

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=4.7e-06  Score=35.07  Aligned_cols=28  Identities=43%  Similarity=0.925  Sum_probs=20.6

Q ss_pred             CCCeeCccchhccCChHHHHHHHHhhCC
Q psy17779         94 LRPYPCTHCGKKFGRKDHLKKHLRTHFP  121 (141)
Q Consensus        94 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  121 (141)
                      |+||.|.+|...|....-+.-|.|+|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            4677777777777777777777777765

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.83  E-value=6.8e-06  Score=32.62  Aligned_cols=24  Identities=38%  Similarity=0.761  Sum_probs=20.8

Q ss_pred             eeCccchhccCChHHHHHHHHhhC
Q psy17779         97 YPCTHCGKKFGRKDHLKKHLRTHF  120 (141)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~h~  120 (141)
                      |+|..|+++|...++|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            578889999999999999999884

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.78  E-value=7.8e-06  Score=33.87  Aligned_cols=25  Identities=36%  Similarity=0.755  Sum_probs=14.3

Q ss_pred             CccccCcchhccCChHHHHHHHHHh
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIH   61 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h   61 (141)
                      +||.|..||+.|......++|.+.|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4555666666666555555555544

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=8.5e-06  Score=35.04  Aligned_cols=29  Identities=48%  Similarity=0.872  Sum_probs=18.6

Q ss_pred             ccccCCccCcccCChHhHHHHHHHhCCCCCe
Q psy17779         67 YKCDAENCGKSFTRNEELTRHKRIHSGLRPY   97 (141)
Q Consensus        67 ~~c~~~~C~~~~~~~~~l~~h~~~h~~~~~~   97 (141)
                      ..|.  .||+.|.....|..|..+|.+|+||
T Consensus         6 ~~ce--~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACE--ICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEET--TTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHH--HHHHHHHHHHHHHhhhcccCCCCCC
Confidence            3454  6666666666666666666666665

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=8e-06  Score=33.41  Aligned_cols=25  Identities=40%  Similarity=0.780  Sum_probs=15.1

Q ss_pred             cccCcchhccCChHHHHHHHHHhCC
Q psy17779         39 FNCPHCNVAFSNNGQLKGHIRIHTG   63 (141)
Q Consensus        39 ~~C~~C~~~f~~~~~l~~h~~~h~~   63 (141)
                      +.|.+||++|...+.|++|+..|++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            3466666666666666666655554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.6e-05  Score=32.42  Aligned_cols=26  Identities=38%  Similarity=0.788  Sum_probs=22.8

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhC
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHF  120 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~  120 (141)
                      +|++|..|.++-...+.|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68899999998889999999999884

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.73  E-value=1.5e-05  Score=35.96  Aligned_cols=30  Identities=27%  Similarity=0.644  Sum_probs=24.0

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhCCCCC
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHFPQPR  124 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  124 (141)
                      +.|.|..|++.|.+..+|--|++.|..++.
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchHH
Confidence            458888888888888888888888876553

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=1.1e-05  Score=33.14  Aligned_cols=27  Identities=44%  Similarity=0.781  Sum_probs=16.6

Q ss_pred             CccccCcchhccCChHHHHHHHHHhCC
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHTG   63 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~~   63 (141)
                      +||+|..|...-...+.|..|.+.|++
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            456666666666666666666665554

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=3e-05  Score=31.98  Aligned_cols=26  Identities=35%  Similarity=0.668  Sum_probs=15.0

Q ss_pred             cccCcchhccCChHHHHHHHHHhCCC
Q psy17779         39 FNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        39 ~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      |.|++|+......+-|+.|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            45556665555556666666655543

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=3.3e-05  Score=32.41  Aligned_cols=26  Identities=31%  Similarity=0.712  Sum_probs=13.7

Q ss_pred             CccccCCccCcccCChHhHHHHHHHh
Q psy17779         66 PYKCDAENCGKSFTRNEELTRHKRIH   91 (141)
Q Consensus        66 ~~~c~~~~C~~~~~~~~~l~~h~~~h   91 (141)
                      ||.|....|++.+...++|..|++.+
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhh
Confidence            44555445555555555555555543

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=4.7e-05  Score=31.57  Aligned_cols=26  Identities=27%  Similarity=0.651  Sum_probs=19.3

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhC
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHF  120 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~  120 (141)
                      +||.|..|+......++|..|+++-+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            47778888877777788888877633

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=2.5e-05  Score=33.04  Aligned_cols=26  Identities=46%  Similarity=0.915  Sum_probs=17.1

Q ss_pred             CCeeCcc--chhccCChHHHHHHH-HhhC
Q psy17779         95 RPYPCTH--CGKKFGRKDHLKKHL-RTHF  120 (141)
Q Consensus        95 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~  120 (141)
                      +||.|..  |.++|++.++-..|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            4666665  777777777777775 5554

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.44  E-value=7.2e-05  Score=30.04  Aligned_cols=25  Identities=48%  Similarity=0.794  Sum_probs=17.5

Q ss_pred             ccCcchhccCChHHHHHHHHHhCCC
Q psy17779         40 NCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        40 ~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      +|+.|.+.|.++--|+.|.+.|+++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            4677777777777777777777665

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.33  E-value=8e-05  Score=33.48  Aligned_cols=28  Identities=25%  Similarity=0.781  Sum_probs=19.3

Q ss_pred             CccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      +.|.|..|++.|.+...|--|++.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            3467777777777777777777766544

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=0.00012  Score=30.26  Aligned_cols=26  Identities=27%  Similarity=0.655  Sum_probs=19.1

Q ss_pred             CccccCcchhccCChHHHHHHHHHhC
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHT   62 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~   62 (141)
                      +||.|.+|.......++|+.|+++.+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            46778888877777777887777644

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.23  E-value=0.00015  Score=29.76  Aligned_cols=26  Identities=42%  Similarity=1.012  Sum_probs=12.0

Q ss_pred             CccccCCccCcccCChHhHHHHHHHh
Q psy17779         66 PYKCDAENCGKSFTRNEELTRHKRIH   91 (141)
Q Consensus        66 ~~~c~~~~C~~~~~~~~~l~~h~~~h   91 (141)
                      ||.|+...|++.|..++.|++|.+.|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            44444444444444444444444433

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.00015  Score=32.42  Aligned_cols=29  Identities=38%  Similarity=0.913  Sum_probs=23.5

Q ss_pred             CCCccccCCccCcccCChHhHHHHHHHhC
Q psy17779         64 ERPYKCDAENCGKSFTRNEELTRHKRIHS   92 (141)
Q Consensus        64 ~~~~~c~~~~C~~~~~~~~~l~~h~~~h~   92 (141)
                      ++||.|..+.|+..|.++..|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            57888877788888888888888877764

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.00011  Score=30.31  Aligned_cols=27  Identities=26%  Similarity=0.643  Sum_probs=21.6

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhCC
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHFP  121 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  121 (141)
                      +||+|..|..-..++++|..|.+.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            578888888888888888888876444

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00015  Score=29.39  Aligned_cols=25  Identities=36%  Similarity=0.850  Sum_probs=14.3

Q ss_pred             CccccCcchhccCChHHHHHHHHHh
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIH   61 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h   61 (141)
                      +||+|..|...-...++|+.|.+.|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            4555666655555555555555554

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.20  E-value=0.00014  Score=29.86  Aligned_cols=25  Identities=44%  Similarity=1.003  Sum_probs=22.3

Q ss_pred             CCeeCcc--chhccCChHHHHHHHHhh
Q psy17779         95 RPYPCTH--CGKKFGRKDHLKKHLRTH  119 (141)
Q Consensus        95 ~~~~C~~--C~~~f~~~~~l~~H~~~h  119 (141)
                      .||.|..  |++.|+.++.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4788875  999999999999999987

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.16  E-value=0.00019  Score=28.75  Aligned_cols=22  Identities=36%  Similarity=0.570  Sum_probs=10.9

Q ss_pred             ccCcccCChHhHHHHHHHhCCC
Q psy17779         73 NCGKSFTRNEELTRHKRIHSGL   94 (141)
Q Consensus        73 ~C~~~~~~~~~l~~h~~~h~~~   94 (141)
                      .|.+.|.+...|+-|-+.|+||
T Consensus         5 ~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           5 TCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             TTCCCCSSHHHHHHHHHHHSSC
T ss_pred             chHHHHHHhHhhhhccccccCC
Confidence            4445555555555554444444

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.16  E-value=0.00014  Score=28.71  Aligned_cols=23  Identities=30%  Similarity=0.787  Sum_probs=14.9

Q ss_pred             cccCcchhccCChHHHHHHHHHh
Q psy17779         39 FNCPHCNVAFSNNGQLKGHIRIH   61 (141)
Q Consensus        39 ~~C~~C~~~f~~~~~l~~h~~~h   61 (141)
                      |+|..|..+|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666666666666666666655

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.15  E-value=0.00024  Score=29.14  Aligned_cols=28  Identities=36%  Similarity=0.707  Sum_probs=19.4

Q ss_pred             CccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      ..|.|..|...|...-.|+.||..|+++
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            3467777777777777777777777653

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.00022  Score=29.36  Aligned_cols=25  Identities=40%  Similarity=0.848  Sum_probs=19.9

Q ss_pred             CeeCccchhccCChHHHHHHHHhhC
Q psy17779         96 PYPCTHCGKKFGRKDHLKKHLRTHF  120 (141)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~h~  120 (141)
                      ||.|..|+.+|....+|..|+.+-.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            6788888888888888888887643

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.06  E-value=0.00018  Score=29.69  Aligned_cols=27  Identities=41%  Similarity=0.864  Sum_probs=14.8

Q ss_pred             CeeCcc--chhccCChHHHHHHHHhhCCC
Q psy17779         96 PYPCTH--CGKKFGRKDHLKKHLRTHFPQ  122 (141)
Q Consensus        96 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~  122 (141)
                      ||.|..  |++.|...-.|.+|.-+|+||
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            455543  555555555555555555543

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00021  Score=29.42  Aligned_cols=24  Identities=29%  Similarity=0.837  Sum_probs=19.8

Q ss_pred             ccccCcchhccCChHHHHHHHHHh
Q psy17779         38 KFNCPHCNVAFSNNGQLKGHIRIH   61 (141)
Q Consensus        38 ~~~C~~C~~~f~~~~~l~~h~~~h   61 (141)
                      ||.|..|...|..+++|..||...
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            578888888888888888888753

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.00039  Score=31.43  Aligned_cols=27  Identities=33%  Similarity=0.983  Sum_probs=20.4

Q ss_pred             CCCCCeeCccchhccCChHHHHHHHHh
Q psy17779         92 SGLRPYPCTHCGKKFGRKDHLKKHLRT  118 (141)
Q Consensus        92 ~~~~~~~C~~C~~~f~~~~~l~~H~~~  118 (141)
                      +|-|||.|..|++.|-+...+.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            356788888888888888888777653

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.98  E-value=0.00052  Score=28.12  Aligned_cols=28  Identities=25%  Similarity=0.659  Sum_probs=17.3

Q ss_pred             CCeeCccchhccCChHHHHHHHHhhCCC
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLRTHFPQ  122 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  122 (141)
                      ..|.|..|...|...-.|+-|+-+|+||
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            3456666666666666666666666654

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=0.00016  Score=30.56  Aligned_cols=29  Identities=38%  Similarity=0.953  Sum_probs=20.7

Q ss_pred             CCccccCCccCcccCChHhHHHHH-HHhCC
Q psy17779         65 RPYKCDAENCGKSFTRNEELTRHK-RIHSG   93 (141)
Q Consensus        65 ~~~~c~~~~C~~~~~~~~~l~~h~-~~h~~   93 (141)
                      +||.|..+.|.+.|.+.++-..|+ +.|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            467777777888888887777776 55543

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.87  E-value=0.00038  Score=29.32  Aligned_cols=23  Identities=43%  Similarity=1.054  Sum_probs=20.1

Q ss_pred             CeeCccchhccCChHHHHHHHHh
Q psy17779         96 PYPCTHCGKKFGRKDHLKKHLRT  118 (141)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~  118 (141)
                      ||.|.+|++.|.....|.+|+..
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            68899999999999988888765

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.0011  Score=26.82  Aligned_cols=25  Identities=32%  Similarity=0.616  Sum_probs=21.7

Q ss_pred             CeeCccchhccCChHHHHHHHHhhC
Q psy17779         96 PYPCTHCGKKFGRKDHLKKHLRTHF  120 (141)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~h~  120 (141)
                      |.+|..|.++.++..+|+-|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5688889999999999999999885

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.58  E-value=0.00084  Score=27.58  Aligned_cols=26  Identities=35%  Similarity=0.690  Sum_probs=12.4

Q ss_pred             ccccCc--chhccCChHHHHHHHHHhCC
Q psy17779         38 KFNCPH--CNVAFSNNGQLKGHIRIHTG   63 (141)
Q Consensus        38 ~~~C~~--C~~~f~~~~~l~~h~~~h~~   63 (141)
                      ||+|.+  |++.|.+.-.|.+|..+|++
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            344443  55555555555555444443

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.56  E-value=0.0011  Score=28.78  Aligned_cols=16  Identities=38%  Similarity=0.532  Sum_probs=7.8

Q ss_pred             cCChHhHHHHHHHhCC
Q psy17779         78 FTRNEELTRHKRIHSG   93 (141)
Q Consensus        78 ~~~~~~l~~h~~~h~~   93 (141)
                      |.....|..|++.|+|
T Consensus        17 f~a~YkLv~H~R~HTg   32 (33)
T d2glia2          17 FKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CSSHHHHHHHTHHHHC
T ss_pred             chhHHHHHHHHhhcCC
Confidence            4444445555555544

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.53  E-value=0.00081  Score=27.10  Aligned_cols=22  Identities=27%  Similarity=0.679  Sum_probs=18.9

Q ss_pred             ccccCcchhccCChHHHHHHHH
Q psy17779         38 KFNCPHCNVAFSNNGQLKGHIR   59 (141)
Q Consensus        38 ~~~C~~C~~~f~~~~~l~~h~~   59 (141)
                      ||+|..||+.+..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5889999999999999988864

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.0018  Score=28.79  Aligned_cols=28  Identities=39%  Similarity=0.850  Sum_probs=24.2

Q ss_pred             CCCCeeCcc--chhccCChHHHHHHHHhhC
Q psy17779         93 GLRPYPCTH--CGKKFGRKDHLKKHLRTHF  120 (141)
Q Consensus        93 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~  120 (141)
                      .+|||.|..  |+..|.+...|..|+..|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            478999965  9999999999999988874

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.0012  Score=27.13  Aligned_cols=24  Identities=21%  Similarity=0.575  Sum_probs=17.3

Q ss_pred             CccccCcchhccCChHHHHHHHHH
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRI   60 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~   60 (141)
                      +||+|..|.....+.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            467777777777777777777764

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.27  E-value=0.0012  Score=25.91  Aligned_cols=22  Identities=23%  Similarity=0.706  Sum_probs=17.9

Q ss_pred             ccccCcchhccCChHHHHHHHH
Q psy17779         38 KFNCPHCNVAFSNNGQLKGHIR   59 (141)
Q Consensus        38 ~~~C~~C~~~f~~~~~l~~h~~   59 (141)
                      ||+|..|+..|-++-.|+.|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6788888888888888888864

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.26  E-value=0.0018  Score=26.97  Aligned_cols=29  Identities=31%  Similarity=0.699  Sum_probs=17.2

Q ss_pred             CccccCCccCcccCChHhHHHHHHHhCCC
Q psy17779         66 PYKCDAENCGKSFTRNEELTRHKRIHSGL   94 (141)
Q Consensus        66 ~~~c~~~~C~~~~~~~~~l~~h~~~h~~~   94 (141)
                      .|.|..+.|+..|.....|..|+-.|+||
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            45555556666666666666666656553

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.22  E-value=0.0016  Score=29.38  Aligned_cols=25  Identities=20%  Similarity=0.473  Sum_probs=18.1

Q ss_pred             CCCccccCcchhccCChHHHHHHHH
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIR   59 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~   59 (141)
                      +.+||.|..|++.|--..++.+|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            4577788888888777777777753

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.0022  Score=27.56  Aligned_cols=26  Identities=27%  Similarity=0.752  Sum_probs=23.3

Q ss_pred             CeeCccchhccCChHHHHHHHHhhCC
Q psy17779         96 PYPCTHCGKKFGRKDHLKKHLRTHFP  121 (141)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~h~~  121 (141)
                      .|.|.+|++.|...+.+.+|.....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48999999999999999999888765

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.17  E-value=0.0016  Score=27.40  Aligned_cols=22  Identities=32%  Similarity=0.644  Sum_probs=15.8

Q ss_pred             ccccCcchhccCChHHHHHHHH
Q psy17779         38 KFNCPHCNVAFSNNGQLKGHIR   59 (141)
Q Consensus        38 ~~~C~~C~~~f~~~~~l~~h~~   59 (141)
                      ||.|..|++.|.....|.+|+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            5677777777777777777764

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.04  E-value=0.0027  Score=24.87  Aligned_cols=23  Identities=35%  Similarity=0.896  Sum_probs=18.2

Q ss_pred             CCeeCccchhccCChHHHHHHHH
Q psy17779         95 RPYPCTHCGKKFGRKDHLKKHLR  117 (141)
Q Consensus        95 ~~~~C~~C~~~f~~~~~l~~H~~  117 (141)
                      +||+|..|...|-+..+|..|+-
T Consensus         1 mpykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           1 MPYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHH
Confidence            47888888888888888887753

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.69  E-value=0.0079  Score=24.56  Aligned_cols=27  Identities=22%  Similarity=0.517  Sum_probs=20.6

Q ss_pred             ccccCcchhccCChHHHHHHHHHhCCC
Q psy17779         38 KFNCPHCNVAFSNNGQLKGHIRIHTGE   64 (141)
Q Consensus        38 ~~~C~~C~~~f~~~~~l~~h~~~h~~~   64 (141)
                      .|.|..||+...+...++-|+...++.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn~   28 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHNS   28 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             ceechhHHHHHhhccCceEEEeecccC
Confidence            377888888888888888887665543

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.44  E-value=0.0059  Score=25.37  Aligned_cols=28  Identities=29%  Similarity=0.720  Sum_probs=24.5

Q ss_pred             CCeeCcc--chhccCChHHHHHHHHhhCCC
Q psy17779         95 RPYPCTH--CGKKFGRKDHLKKHLRTHFPQ  122 (141)
Q Consensus        95 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  122 (141)
                      +.|.|..  |+..|.....|..|.-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            4688876  899999999999999999886

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.07  E-value=0.0083  Score=27.94  Aligned_cols=27  Identities=22%  Similarity=0.453  Sum_probs=22.7

Q ss_pred             CccccCcchhccCChHHHHHHHHHhCC
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHTG   63 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~~   63 (141)
                      ..|.|..|++.|+....|+.|...|-.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcCc
Confidence            347899999999999999999887754

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.007  Score=28.21  Aligned_cols=26  Identities=35%  Similarity=0.653  Sum_probs=22.4

Q ss_pred             CeeCccchhccCChHHHHHHHHhhCC
Q psy17779         96 PYPCTHCGKKFGRKDHLKKHLRTHFP  121 (141)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~h~~  121 (141)
                      .+.|..|++.|.....|++|..-|..
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            47899999999999999999888753

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.85  E-value=0.0062  Score=26.34  Aligned_cols=20  Identities=25%  Similarity=0.305  Sum_probs=17.2

Q ss_pred             hhccCChHHHHHHHHhhCCC
Q psy17779        103 GKKFGRKDHLKKHLRTHFPQ  122 (141)
Q Consensus       103 ~~~f~~~~~l~~H~~~h~~~  122 (141)
                      ++.|...-.|..|+|+|+||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            34688889999999999986

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.71  E-value=0.017  Score=24.67  Aligned_cols=27  Identities=22%  Similarity=0.571  Sum_probs=21.8

Q ss_pred             CccccCcchhccCChHHHHHHHHHhCC
Q psy17779         37 KKFNCPHCNVAFSNNGQLKGHIRIHTG   63 (141)
Q Consensus        37 ~~~~C~~C~~~f~~~~~l~~h~~~h~~   63 (141)
                      ..|.|..|++.|.....|.+|...-.+
T Consensus         3 ~afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             ceeeecccccchhcchHHHHHhhhcCC
Confidence            357899999999999999988775444

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.67  E-value=0.015  Score=23.39  Aligned_cols=25  Identities=32%  Similarity=0.588  Sum_probs=18.3

Q ss_pred             ccccCcchhccCChHHHHHHHHHhC
Q psy17779         38 KFNCPHCNVAFSNNGQLKGHIRIHT   62 (141)
Q Consensus        38 ~~~C~~C~~~f~~~~~l~~h~~~h~   62 (141)
                      |-+|+.|..+..++..|+.|.+.|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            3467788888888888888877664

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.22  E-value=0.024  Score=22.86  Aligned_cols=23  Identities=30%  Similarity=0.718  Sum_probs=12.2

Q ss_pred             ccCCccCcccCChHhHHHHHHHh
Q psy17779         69 CDAENCGKSFTRNEELTRHKRIH   91 (141)
Q Consensus        69 c~~~~C~~~~~~~~~l~~h~~~h   91 (141)
                      |+...|.+.|.+.+.+..|+..|
T Consensus         4 CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           4 CPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCSTTCCCEESSHHHHHHHHGGG
T ss_pred             CCcccHHHHhhchHHHHHHhhcc
Confidence            33345555555555555555443

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.18  E-value=0.022  Score=22.84  Aligned_cols=23  Identities=35%  Similarity=0.924  Sum_probs=19.0

Q ss_pred             cccCcchhccCChHHHHHHHHHh
Q psy17779         39 FNCPHCNVAFSNNGQLKGHIRIH   61 (141)
Q Consensus        39 ~~C~~C~~~f~~~~~l~~h~~~h   61 (141)
                      |.|+.|+.....++.|..|++..
T Consensus         3 ~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHT
T ss_pred             ccCCcchhheeehhhhhHHhhhc
Confidence            67888988888888888888753

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.92  E-value=0.021  Score=22.32  Aligned_cols=22  Identities=27%  Similarity=0.901  Sum_probs=18.6

Q ss_pred             cccCcchhccCChHHHHHHHHH
Q psy17779         39 FNCPHCNVAFSNNGQLKGHIRI   60 (141)
Q Consensus        39 ~~C~~C~~~f~~~~~l~~h~~~   60 (141)
                      |.|+.|-+.|..+.++..|.+.
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            7789999999999998888763

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.83  E-value=0.04  Score=23.25  Aligned_cols=22  Identities=27%  Similarity=0.635  Sum_probs=16.8

Q ss_pred             CeeCccchhccCChHHHHHHHH
Q psy17779         96 PYPCTHCGKKFGRKDHLKKHLR  117 (141)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~  117 (141)
                      .|.|..||-.|+..+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            3778888888888888877765

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.19  E-value=0.055  Score=21.42  Aligned_cols=16  Identities=44%  Similarity=1.028  Sum_probs=6.6

Q ss_pred             ccCcccCChHhHHHHH
Q psy17779         73 NCGKSFTRNEELTRHK   88 (141)
Q Consensus        73 ~C~~~~~~~~~l~~h~   88 (141)
                      .|++.|..-..|+-|+
T Consensus         8 ~c~kafkkhnqlkvhq   23 (28)
T d2j7ja1           8 NCGKAFKKHNQLKVHQ   23 (28)
T ss_dssp             TCCCEESSHHHHHHHH
T ss_pred             CchHHHhhccceEEEe
Confidence            3444444444444443

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.26  E-value=0.12  Score=20.85  Aligned_cols=21  Identities=38%  Similarity=0.918  Sum_probs=13.9

Q ss_pred             ccCCccCcccCChHhHHHHHH
Q psy17779         69 CDAENCGKSFTRNEELTRHKR   89 (141)
Q Consensus        69 c~~~~C~~~~~~~~~l~~h~~   89 (141)
                      |..+.|++.|.+...|..|.+
T Consensus         3 cdf~gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           3 CDFPGCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             CSSTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCchhhhccHHHHHhHHH
Confidence            455577777777776666654

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.16  E-value=0.17  Score=23.27  Aligned_cols=32  Identities=19%  Similarity=0.370  Sum_probs=22.2

Q ss_pred             CCCCeeCccchhccCChHHHHHHHHhhCCCCC
Q psy17779         93 GLRPYPCTHCGKKFGRKDHLKKHLRTHFPQPR  124 (141)
Q Consensus        93 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  124 (141)
                      .+.|-.|..|+....++.+|++|...-+-.+|
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~kp   52 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFAKP   52 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSCSC
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhccC
Confidence            35677777777777777777777776554444

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.44  E-value=0.04  Score=27.98  Aligned_cols=23  Identities=30%  Similarity=0.603  Sum_probs=18.7

Q ss_pred             CeeCccchhccCChHHHHHHHHh
Q psy17779         96 PYPCTHCGKKFGRKDHLKKHLRT  118 (141)
Q Consensus        96 ~~~C~~C~~~f~~~~~l~~H~~~  118 (141)
                      .|.|..|++.|.+...|..|.++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            47888888888888888888654

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.96  E-value=0.092  Score=22.38  Aligned_cols=29  Identities=10%  Similarity=0.371  Sum_probs=23.6

Q ss_pred             CCCCccccCcchhccCChHHHHHHHHHhC
Q psy17779         34 QRPKKFNCPHCNVAFSNNGQLKGHIRIHT   62 (141)
Q Consensus        34 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~   62 (141)
                      ++...|.|..|.+.+...+++-+|..+.+
T Consensus         4 Eg~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           4 EGEHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             ccCcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            45567899999999999999999887544

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.08  E-value=0.039  Score=28.02  Aligned_cols=24  Identities=29%  Similarity=0.508  Sum_probs=18.5

Q ss_pred             CCccccCcchhccCChHHHHHHHH
Q psy17779         36 PKKFNCPHCNVAFSNNGQLKGHIR   59 (141)
Q Consensus        36 ~~~~~C~~C~~~f~~~~~l~~h~~   59 (141)
                      ...|.|..|++.|.+...|..|.+
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCEEecccccCccCCHHHHHHHHc
Confidence            344778888888888888888864

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.69  E-value=0.27  Score=22.58  Aligned_cols=26  Identities=19%  Similarity=0.583  Sum_probs=16.1

Q ss_pred             CCCccccCcchhccCChHHHHHHHHH
Q psy17779         35 RPKKFNCPHCNVAFSNNGQLKGHIRI   60 (141)
Q Consensus        35 ~~~~~~C~~C~~~f~~~~~l~~h~~~   60 (141)
                      .+.|-.|+.|+....+..+|.+|...
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            34455666666666666666666653

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=83.14  E-value=0.63  Score=18.66  Aligned_cols=22  Identities=27%  Similarity=0.821  Sum_probs=12.7

Q ss_pred             ccccCCccCcccCChHhHHHHH
Q psy17779         67 YKCDAENCGKSFTRNEELTRHK   88 (141)
Q Consensus        67 ~~c~~~~C~~~~~~~~~l~~h~   88 (141)
                      |.|....|+..|....+++.|.
T Consensus         3 f~cdsd~cdl~fttkanmkkhf   24 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHF   24 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHH
T ss_pred             ccccCCCcceEEeehHHHHHHH
Confidence            4455455666666666666554

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=80.67  E-value=0.82  Score=19.56  Aligned_cols=23  Identities=17%  Similarity=0.287  Sum_probs=16.4

Q ss_pred             eeCccchhccCChHHHHHHHHhh
Q psy17779         97 YPCTHCGKKFGRKDHLKKHLRTH  119 (141)
Q Consensus        97 ~~C~~C~~~f~~~~~l~~H~~~h  119 (141)
                      -.|+.|+-.|...+.+..|..-.
T Consensus         9 rYC~~CDI~Fn~~~T~~aHKk~Y   31 (36)
T d1fu9a_           9 KYCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             SEETTTTEECSSHHHHHHHHHHT
T ss_pred             hHHhhCCceehhHHHHHHHHHhc
Confidence            35777777788877777776644