Psyllid ID: psy17790

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------1580------1590------1600------1610------1620------1630------1640------1650------1660------1670------1680------1690------1700------1710------1720------1730------1740------1750------1760------1770------1780------1790------1800------1810------1820------1830------1840------1850------1860------1870------1880------1890------1900------1910------1920------1930------1940------1950------1960------1970------1980------1990------2000------2010------2020------2030------2040------2050------2060------2070------2080------2090------2100------2110------2120------2130------2140------2150------2160------2170------2180------2190------2200------2210------2220------2230------2240------2250------2260------2270------2280------2290------2300------2310------2320------2330------2340------2350------2360------2370------2380------2390------2400------2410------2420------2430------2440------2450------2460------2470------2480------2490------2500------2510------2520------2530------2540------2550------2560----
MDSKWLETGLQYPSIHQLGRGVYTLSSKAMWPKGIPGQGKPIRGPPGEPGSPGFPGLEGDVGFPGLPGRPGLKGPKGNDCGFCPPGRPGVKGEAGEAAINGIPGDPGAPGRMGEKGSRGPDGKMGPPGNKGLDGKHGTQGIEGPPGPPGAPGKLAPLSRVDIARAVGDQGLQGIEVGLRGDPGEGGINSKGTKGESGVYGIPGLQGPRGPMGERGPPGYQGPYGERGPRGQIGFPGPRDCGPSHKGRLGRALFLNFSKMGCHGCANRLTCNCDGIVGLPGEKGVRGIEGAEGNPGDTGPDGPPGPPGKEGIMGEWGETGEKGMRGDKGFQGPKGRAGLQGYPGPPGYPGPKGLDGCNGTDGAPGIAGIPGTSGKRGEFGADGQRVILKSLCTNSKYRSRKDLQYNCSTQNPPCSPLHTPLKWVDLTCKCTTNLQIQSPPCSPLHTPLKWVGSEGLPGLVGPPGAKGFPGQPGRKGEKAKPGGPQPAGLNFRPPCTILKDFKVLYRDFQMGLCAHQGSMGALGEVGPKGFQGEPGPKGYAGLAGLPGLNGTHGWPGEPGPRGPPGVKGEPGMDGDPGLSGNPWTLPKYLHLRRGQTRRAAAPRFEFQTPVHRLERFQSSLSGLSNGWCQPWDPGAENVGPTGVRGEDGDVGEPGPPGPIIEDTEQKPGNISYSFKGPKGMPGARGDRGPYGLKGERGVPGRPGIDGYPGIKGVKGVQGREGWRGKEGKDGRPGDAGVKGDKGAPGLAGRDGSPGEPGSKGDEGLPGLPGLQGPEGDRGIYDPTLDKIEPGVTGPQGPIGPRGEPGEDGYNGKPGPPGLQGRTGEPGPPGIVGPIGPKGISIPGEAGVDGTPGPPGQPGVYGPPGIPGLPGPKGQQGVTIIGPPGQDGVPGQDGFKGVQGDRGDPGVQESPAHVAHQTLSFGPRTPGGPNRKAFTAMNPLQGPYGAPGDEGRDGLPGRNGVPGSKGDPATIPKEYLRGDAGYDGLPGEPGTPGDMGLKGEAGDTISSEVNMKGEKGYPGPPGDQGAPGFEGEPGIPGDKGIPGDSGPIGEPGISLQGPTGFKGRPGRPGDWGPKGAQGATGIQGLPGLPGLPGAIGPQGEPGFPGYQGPKGPVGMRGPPGIPGAPGFEGEPGIPGDKGIPGDSGPIGEPGISLQGPTGFKGRPGRPGDWGPKGAQGATGIQGLPGLPSYSGQINKVYSINFILGDRGSVGESIFFPGPPGTPGRPGSKGEPGDEGPVGYRGIPGPDGRKGVSGPKGLPGLTGETGLPGLKGEEGDMLPGYPGTPGVPGIPGLKGIPGDKGSTGLDGEEGDMLPGYPGTPGVPGMPGLKGITGDKGSTGLDGTPGPDGDRGKKGSRGPLGPRGQQGDPGPDGIPGRPGRVLHPGATGIPGDKGDIGPPGSTGFVGKPGSTGFVGKPGLQGLPGNKGEQGRRGTPGPVGQMGPPGAKGVIGDYGDAGYPGEDGESAFSGLQGDKGEPGQTGPMGYPGLPGIPGEPGPLGDLGESIDGEPGYPGSNGRDGFNGLPGRPGNKVSINLICTDSVKRNELKPSHSLSGRPEGYPGLPGIPGEPGPLGDLGESIDGEPGYPGSNGRDGFNGLPGRPGNKVYLIVCVLIRYQVDLSDGTFQPYLSGLPDSVCAHQGSMGALGEVGPKGFQGEPGPKGYAGLAGLPGLNGTHGWPGEPGPRGPPGVKGEPGMDGDPGLSGNPGIPGDRGPRGGPGLSGAPGPKGEPGDIGLPENIIAATKGDFGEPGMTGLTGEKGWRGDVGWPGRNGTKGLPGAIGPQGEPGFPGYQGPKGPVGMRGPPGIPGLTDVMLAERGDPGRDGLPGRDGKPGLPGVKGAPGEYGIDGPPGPPGAPGLSRKGNPGKPGYPGRIVEGLPGLPGLPGEDGKPGTPGVRGEPGEPGRPIPGDGLPGRDGKPGLPGVKGAPGEYGIDGPPGPPGAPGLSRKGNPGKPGYPGRIVEGLPGLPGLPGEDGKPGTPGGQSGGKGDRGSVGESIFFPGPPGTPGRPGSKGEPGDEGPVGYRGIPGPDGRKGVAGPKGLPGLTGETGLPQSVAVLPELKDKIVEMTEIVKESLSNAVISTKIVKKLSALPQINHALFGIAGTNGAKGETGPPGDTGVEGYPGTPGAKGDRGFIGDTGLPGMDGTPGEKGFQGEPGDTLAYNLQWTRGRAGEIGPRGDTLAYNLQWTRGRAGEIGPRGPVGFQGIPGAPGLPAPPPPPPPSRGFFLTFHSQTDMEPECPRYTSKLWSGYSLLHISGDNKAHTQDLGSPGSCLPRFSTMPFLFCSLTQTCDYASRGDNSYWLSSTEPMLKTMEPIPSADLKKYVSRCSVCESTTRAIAIHSQSVTIPSCPGGWEELWVGFSFLMHTDAGSGGGGQSLISPGSCLQDFRPTPFIQCHGVGSCNYYSTASSFWLATLDDRDQWRKPRPQTLKANDLKTRISRCAVCLRRKSEPGRLVRPVVEASRPVYEQRARPNYNVNRPSYDPNLNQAGYNPNLNRGGYDPNLNRAGYNPNLNRGGYDQSRGSYDPNQYRGYGQNRTIYDPLRARTYNVNRPEGYYYPGNSTRQGQTLRS
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccEEEEEEEcEEccccccccccccccccHHHHccccccEEccccccEEEcccccHHHHHcccccccccccccccccccccccEEEcccEEEEcccccccccccEEEEcccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccEEEEEEEEEEEEEEccEEEEcccccHHHEEccEccccEEEEccccEEEEcccccEEEEEEcccccccccccEEHHHHHHHEcEEEEEEEcccEEEEEccccccccccccEEEEEEEEEEEEEEcHHHcEEEcccccHHHEEcccccccEEEEEcccEEEcccccEEEEEEcccHHHcccccccEEEcccccHHHEcEEEEEEEcccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccEEEEEcccccccEcccccccccccccc
mdskwletglqypsihqlgRGVYtlsskamwpkgipgqgkpirgppgepgspgfpglegdvgfpglpgrpglkgpkgndcgfcppgrpgvkgeageaaingipgdpgapgrmgekgsrgpdgkmgppgnkgldgkhgtqgiegppgppgapgklaplsrVDIARAVgdqglqgievglrgdpgegginskgtkgesgvygipglqgprgpmgergppgyqgpygergprgqigfpgprdcgpshkgrlgrALFLnfskmgchgcanrltcncdgivglpgekgvrgiegaegnpgdtgpdgppgppgkegimgewgetgekgmrgdkgfqgpkgraglqgypgppgypgpkgldgcngtdgapgiagipgtsgkrgefgadGQRVILKSLCtnskyrsrkdlqyncstqnppcsplhtplkwvdltckcttnlqiqsppcsplhtplkwvgseglpglvgppgakgfpgqpgrkgekakpggpqpaglnfrppctilkDFKVLYRDFQMGlcahqgsmgalgevgpkgfqgepgpkgyaglaglpglngthgwpgepgprgppgvkgepgmdgdpglsgnpwtlpkylhlrrgqtrraaaprfefqtpvhrLERFQsslsglsngwcqpwdpgaenvgptgvrgedgdvgepgppgpiiedteqkpgnisysfkgpkgmpgargdrgpyglkgergvpgrpgidgypgikgvkgvqgregwrgkegkdgrpgdagvkgdkgapglagrdgspgepgskgdeglpglpglqgpegdrgiydptldkiepgvtgpqgpigprgepgedgyngkpgppglqgrtgepgppgivgpigpkgisipgeagvdgtpgppgqpgvygppgipglpgpkgqqgvtiigppgqdgvpgqdgfkgvqgdrgdpgvqespahvahqtlsfgprtpggpnrkaftamnplqgpygapgdegrdglpgrngvpgskgdpatipkeylrgdagydglpgepgtpgdmglkgeagdtissevnmkgekgypgppgdqgapgfegepgipgdkgipgdsgpigepgislqgptgfkgrpgrpgdwgpkgaqgatgiqglpglpglpgaigpqgepgfpgyqgpkgpvgmrgppgipgapgfegepgipgdkgipgdsgpigepgislqgptgfkgrpgrpgdwgpkgaqgatgiqglpglpsysgqinkvYSINFilgdrgsvgesiffpgppgtpgrpgskgepgdegpvgyrgipgpdgrkgvsgpkglpgltgetglpglkgeegdmlpgypgtpgvpgipglkgipgdkgstgldgeegdmlpgypgtpgvpgmpglkgitgdkgstgldgtpgpdgdrgkkgsrgplgprgqqgdpgpdgipgrpgrvlhpgatgipgdkgdigppgstgfvgkpgstgfvgkpglqglpgnkgeqgrrgtpgpvgqmgppgakgvigdygdagypgedgesafsglqgdkgepgqtgpmgypglpgipgepgplgdlgesidgepgypgsngrdgfnglpgrpgnkvsinlictdsvkrnelkpshslsgrpegypglpgipgepgplgdlgesidgepgypgsngrdgfnglpgrpgnkvYLIVCVLIRYqvdlsdgtfqpylsglpdsvcahqgsmgalgevgpkgfqgepgpkgyaglaglpglngthgwpgepgprgppgvkgepgmdgdpglsgnpgipgdrgprggpglsgapgpkgepgdiglpeniiaatkgdfgepgmtgltgekgwrgdvgwpgrngtkglpgaigpqgepgfpgyqgpkgpvgmrgppgipgltdvmlaergdpgrdglpgrdgkpglpgvkgapgeygidgppgppgapglsrkgnpgkpgypgriveglpglpglpgedgkpgtpgvrgepgepgrpipgdglpgrdgkpglpgvkgapgeygidgppgppgapglsrkgnpgkpgypgriveglpglpglpgedgkpgtpggqsggkgdrgsvgesiffpgppgtpgrpgskgepgdegpvgyrgipgpdgrkgvagpkglpgltgetglpqsvAVLPELKDKIVEMTEIVKESLSNAVISTKIVKKLSALPQINHALFgiagtngakgetgppgdtgvegypgtpgakgdrgfigdtglpgmdgtpgekgfqgepgdtlaynlqwtrgrageigprgdtlaynlqwtrgrageigprgpvgfqgipgapglpapppppppsrgffltfhsqtdmepecprytsklwsGYSLLHisgdnkahtqdlgspgsclprfstmpflfcsltqtcdyasrgdnsywlsstepmlktmepipsadlkkyvsrcsvcesTTRAIAIHsqsvtipscpggweELWVGFSFLmhtdagsggggqslispgsclqdfrptpfiqchgvgscnyystaSSFWLAtlddrdqwrkprpqtlkandlKTRISRCAVClrrksepgrlvrpvveasrpvyeqrarpnynvnrpsydpnlnqagynpnlnrggydpnlnragynpnlnrggydqsrgsydpnqyrgygqnrtiydplrartynvnrpegyyypgnstrqgqtlrs
MDSKWLETglqypsihqLGRGVYTLSSKAMWPKGIPGQGKPIRGPPGEPGSPGFPGLEGDVGFPGLPGRPGLKGPKGNDCGFCPPGRPGVKGEAGEAAINGipgdpgapgrMGEKGSRGPDGKMGPPGNKGLDGKHGTQGIEGPPGPPGAPGKLAPLSRVDIARAVGDQGlqgievglrgdpgegginskgtkgesgvygIPGLQGPRGPMGERGPPGYQGPYGERGPRGQIGFPGPRDCGPSHKGRLGRALFLNFSKMGCHGCANRLTCNCDGIVGLPGEKGVRGIEGaegnpgdtgpdgppGPPGKEGIMGEWGETGEKGMRGDKGFQGPKGRAGLQGYPGPPGYPGPKGLDGCNGTDGAPGIAGIPGTSGKRGEFGADGQRVILKSLCTNSKYRSRKDLQYNCSTQNPPCSPLHTPLKWVDLTCKCTTNLQIQSPPCSPLHTPLKWVGSEGLPGLVGPPGAKGFPGQPGRKGEKAkpggpqpaglnfrpPCTILKDFKVLYRDFQMGLCAHQGSMGALGEVGPKGFQGEPGPKGYAGLAGLPGLNGTHGWPGEPGPRGPPGVKGEPGMDGDPGLSGNPWTLPKYLHLRRGQTRRAAaprfefqtpvHRLERFQSSLSGLSNGWCQPWDPGAENVGPTGVRGEDGDVGEPGPpgpiiedteqkpGNISYsfkgpkgmpgargdrgpyglkgergvpgrpgidgypgikgvkgvqgregwrgkegkdgrpgdagvkgdkgapglagRDGSPGEPGSKGDEGLPGLPGLQGPEGDRGIYDPTLDKIEPGVTGPQGPIGPRGEPGEDGYNGKPGPPGLQGRTGEPGPPGIVGPIGPKGISIPGEAGVDGTPGPPGQPGVYGPPGIPGLPGPKGQQGVTIIGPPGQDGVPGQDGFKGVQGDRGDPGVQESPAHVAHQTLSFGPRTPGGPNRKAFTAMNPLQGPYGAPGDEGRDGLPGRngvpgskgdpatipKEYLRGDAGYDGLPGEPGTPGDMGLKGEAGDTISSEVNMKGEKGYPGPPGDQGAPGFEGEPGIPGDKGIPGDSGPIGEPGISLQGPTGFKGRPGRPGDWGPKGAQGATGIQGLPGLPGLPGAIGPQGEPGFPGYQGPKGPVGMRGPPGIPGAPGFEGEPGIPGDKGIPGDSGPIGEPGISLQGPTGFKGRPGRPGDWGPKGAQGATGIQGLPGLPSYSGQINKVYSINFILGDRGSVGESIFFPGPPGTPGRPGSKGEPGDEGPVGYRGIPGPDGRKGVSGPKGLPGLTGETGLPGLKGEEGDMLPGYPGTPGVPGIPGLKGIPGDKGSTGLDGEEGDMLPGYPGTPGVPGMPGLKGITGDKGSTGldgtpgpdgdrgkkgsrgplgprgqqgdpgpdgIPGRPGRVLHPGATGIPGDKGDIGPPGSTGFVGKPGSTGFVGKPGLQGLPGNKGEQGRRGTPGPVGQMGPPGAKGVIGDYGDAGYPGEDGESAFSGLQGDKGEPGQTGPMGYPGLPGIPGEPGPLGDLGESIDGEPGYPGSNGRDGFNGLPGRPGNKVSINLICTDsvkrnelkpshslsgrpegypGLPGIPGEPGPLGDLGESIDGEPGYPGSNGRDGFNGLPGRPGNKVYLIVCVLIRYQVDLSDGTFQPYLSGLPDSVCAHQGSMGALGEVGPKGFQGEPGPKGYAGLAGLPGLNGTHGWPGEPGPRGPPGVKGEPGMDGDPGLSGNPGIPGDRGPRGGPGLSGAPGPKGEPGDIGLPENIIAATKGDFGEPGMTGLTGEKGWRGDVGWPGRNGTKGLPGAIGPQGEPGFPGYQGPKGPVGMRGPPGIPGLTDVMLAERGDPgrdglpgrdgkpgLPGVKGAPGEYGIDGPPGPPGAPGLSRKGNPGKPGYPGRIVEGLPGLPGLPGEDGKPGTPGVRGEPGEPGRPIPGDGLPGRDGKPGLPGVKGAPGEYGIDGPPGPPGAPGLSRKGNPGKPGYPGRIVEGLPGLPGLPGEDGKPGTPGGQSGGKGDRGSVGESIFFPGPPGTPGRPGSKGEPGDEGPVGYRGIPGPDGRKGVAGPKGLPgltgetglpqsvAVLPELKDKIVEMTEIVKESLSNAVISTKIVKKLSALPQINHALFGIAGTNGAKGETGPPGDTGVEGYPGTPGAKGDRGFIGDTGLPGMDGTPGEKGFQGEPGDTLAYNLQWTrgrageigprgdTLAYNLQWTRGRAGEIGPRGPVGFQGIPGAPGLPAPPPPPPPSRGFFLTFHSQTDMEPECPRYTSKLWSGYSLLHISGDNKAHTQDLGSPGSCLPRFSTMPFLFCSLTQTCDYASRGDNSYWLSSTEPMLKTMEPIPSADLKKYVSRCSVCESTTraiaihsqsvtipscpGGWEELWVGFSFLMHTDAGSGGGGQSLISPGSCLQDFRPTPFIQCHGVGSCNYYSTASSFWLATLDdrdqwrkprpqtlkandlktrisrcavclrrksepgrlvrpvveasrpvyeqrarpnynvnrpsydpnlNQAGYNPNLNRGGYDPNLNRAGYNPNLNRGGYDQSRGsydpnqyrgygqnrtiydplrARTYnvnrpegyyypgnstrqgqtlrs
MDSKWLETGLQYPSIHQLGRGVYTLSSKAMWPKGIPGQGKpirgppgepgspgfpglegDVgfpglpgrpglkgpkgNDCGFCPPGRPGVKGEAGEAAINGIPGDPGAPGRMGEKGSRGPDGKMGPPGNKGLDGKHGTQGIEgppgppgapgklaplSRVDIARAVGDQGLQGIEVGLRGDPGEGGINSKGTKGESGVYGIPGLQgprgpmgergppgYQGPYGERGPRGQIGFPGPRDCGPSHKGRLGRALFLNFSKMGCHGCANRLTCNCDGIVGLPGEKGVRGIEGAEgnpgdtgpdgppgppgKEGIMGEWGETGEKGMRGDKGFQGPKGRAGLQgypgppgypgpkgLDGCNGTDGAPGIAGIPGTSGKRGEFGADGQRVILKSLCTNSKYRSRKDLQYNCSTQNPPCSPLHTPLKWVDLTCKCTTNLQIQSPPCSPLHTPLKWVGSEGLPGLVGPPGAKGFPGQPGRKGEKAKPGGPQPAGLNFRPPCTILKDFKVLYRDFQMGLCAHQGSMGALGEVGPKGFQGEPGPKGYAGLAGLPGLNGTHgwpgepgprgppgvkgepgMDGDPGLSGNPWTLPKYLHLRRGQTRRAAAPRFEFQTPVHRLERFQSSLSGLSNGWCQPWDPGAENVGPtgvrgedgdvgepgppgpiiedteQKPGNISYSFKGPKGMPGARGDRGPYGLKGERGVPGRPGIDGYPGIKGVKGVQGREGWRGKEGKDGRPGDAGVKGDKGAPGLAGRDGSPGEPGSKgdeglpglpglqgpegdRGIYDPTLDKIEPGVTGPQGPIGPRGEPGEDGYNGKPGPPGLQGRTGEpgppgivgpigpkgisipgEAgvdgtpgppgqpgvygppgipglpgpkgqqgvTIIgppgqdgvpgqdgFKGVQGDRGDPGVQESPAHVAHQTLSFGPRTPGGPNRKAFTAMNPLQGPYGAPGDEGRDGLPGRNGVPGSKGDPATIPKEYLRGDAGYDGLPGEPGTPGDMGLKGEAGDTISSEVNMKGEKGYPGPPGDQGAPGFegepgipgdkgipgdsgpigEPGISLQGPTGFKGRPGRPGDWGPKGAQGATgiqglpglpglpgaigpqgEPGFPGYQGPKGPVGMRGPPGIPGAPGFegepgipgdkgipgdsgpigEPGISLQGPTGFKGRPGRPGDWGPKGAQGATGIQGLPGLPSYSGQINKVYSINFILGDRGSVGESIFFpgppgtpgrpgskgEPGDEGPVGYRGIPGPDGRKGVSgpkglpgltgetglpglkgeegDMLPGYPGTPGVPGIPGLKGIPGDKGSTGLDGEEGDMLPGYPGTPGVPGMPGLKGITGDKgstgldgtpgpdgdrgkkgsrgplgprgqqgdpgpdgipgrpgrVLHPGATgipgdkgdigppgSTGFVGKPGSTGFVGKPGLQGLPGNKGEQGRRGTPGPVGQMGPPGAKGVIGDYGDAGYPGEDGESAFSGLQGDKGEPGQTGPMgypglpgipgepgplgdlgESIDGEPGYPGSNGRDGFNGLPGRPGNKVSINLICTDSVKRNELKPSHSLSGRpegypglpgipgepgplgdlgeSIDGEPGYPGSNGRDGFNGLPGRPGNKVYLIVCVLIRYQVDLSDGTFQPYLSGLPDSVCAHQGSMGALGEVGPKGFQGEPGPKGYAGLAGLPGLNGTHgwpgepgprgppgvkgepgMDGDPGLSgnpgipgdrgprggpglsgapgpkgEPGDIGLPENIIAATKGDFGEPGMTGLTGEKGWRGDVGWPGRNGTKGLPGAIGPQGEPGFPGYQGPKGPVGMRGPPGIPGLTDVMLAErgdpgrdglpgrdgkpglpgVKGApgeygidgppgppgapgLSRKGNPGKPGYPGRIVEglpglpglpgEDGKpgtpgvrgepgepgrpipgdgLPGRDGKPGLPGVKGApgeygidgppgppgapgLSRKGNPGKPGYPGRIVEglpglpglpgEDgkpgtpggqsggkgdrgsvgesIFFpgppgtpgrpgskgEPGDEGPVGYRGIPGPDGRKGVAgpkglpgltgetglpQSVAVLPELKDKIVEMTEIVKESLSNAVISTKIVKKLSALPQINHALFGIAGTNGAKGETGPPGDTGVEGYPGTPGAKGDRGFIGDTGLPGMDGTPGEKGFQGEPGDTLAYNLQWTRGRAGEIGPRGDTLAYNLQWTRGRAGEIGPRGPVGFQGIpgapglpapppppppSRGFFLTFHSQTDMEPECPRYTSKLWSGYSLLHISGDNKAHTQDLGSPGSCLPRFSTMPFLFCSLTQTCDYASRGDNSYWLSSTEPMLKTMEPIPSADLKKYVSRCSVCESTTRAIAIHSQSVTIPSCPGGWEELWVGFSFLMHTDAGSGGGGQSLISPGSCLQDFRPTPFIQCHGVGSCNYYSTASSFWLATLDDRDQWRKPRPQTLKANDLKTRISRCAVCLRRKSEPGRLVRPVVEASRPVYEQRARPNYNVNRPSYDPNLNQAGYNPNLNRGGYDPNLNRAGYNPNLNRGGYDQSRGSYDPNQYRGYGQNRTIYDPLRARTYNVNRPEGYYYPGNSTRQGQTLRS
****WLETGLQYPSIHQLGRGVYTLSSKAMW**************************************************************************************************************************************V********************************************************************************RLGRALFLNFSKMGCHGCANRLTCNCDGIVGLPGE***************************************************************************************************DGQRVILKSLCTNSKYRSRKDLQYNCSTQNPPCSPLHTPLKWVDLTCKCTTNLQIQSPPCSPLHTPLKWVGSEG*********************************LNFRPPCTILKDFKVLYRDFQMGLCAHQGSMGALG***********************************************************WTLPKYLHLRRG********RFEFQTPVHRLERFQ*SLSGLSNGWCQPW*******************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************IQGLPGLPSYSGQINKVYSINFILGDRGSVGESIFF**************************************************************************************************************************************************************************************************************************************************************************************************************************SINLICT***************************************************************GNKVYLIVCVLIRYQVDLSDGTFQPYLSGLPDSVCAHQ**************************************************************************************************IIAA***********GLTGEKGWRGDVGW*********************************************************************************************************************************************************************************************************************************************************************************************VAVLPELKDKIVEMTEIVKESLSNAVISTKIVKKLSALPQINHALFGIAGT******************************************************TLAYNLQWTRGRAGEIGPRGDTLAYNLQWTRGRAGEI*****************************FFLTFH*******ECPRYTSKLWSGYSLLHISGDN*********PGSCLPRFSTMPFLFCSLTQTCDYASRGDNSYWLSST***L*****IPSADLKKYVSRCSVCESTTRAIAIHSQSVTIPSCPGGWEELWVGFSFLMHTDAGSGGGGQSLISPGSCLQDFRPTPFIQCHGVGSCNYYSTASSFWLATLDDRDQWR********ANDLKTRISRCAVCLRR*********************************************************************************YRGYGQNRTIYDPLRARTYNVNRPEGYYY*************
****WLE*****************************************************************************************************************************D**H**********************************************************************************************************************************************************************************************************QGYPGPPGYPGPKGLDG*N*********************************************************************************************************************************************************************************************************PRGPPGVKGEPG*******************************************************************************************************************************************************************************************************************************************DGYNGK*************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************FCSLTQTCDYASRGDNSYWLSSTEPMLKTMEPIPSADLKKYVSRCSVCESTTRAIAIHS*********GGWEELWVGFSFLMHTDA*********ISPGSCLQDFRPTPFIQCHGVGSCNYYSTASSFWLATL*********************RISRCAVCLRRKSEPGRLVRPVVEASRPVYEQRARPNYNVNRPSYDPNLNQAGYNPNLNRGGYDPNLNRAGYNPNL********************GQNRTIYDPLRARTYNVNRPEGYYYPGNS*********
********GLQYPSIHQLGRGVYTLSSKAMWPKGIPGQGKPIRGPPGEPGSPGFPGLEGDVGFPGLPGRPGLKGPKGNDCGFCPPGRPGVKGEAGEAAINGIPGDPGAPG************KMGPPGNKGLDGKHGTQGIEGPPGPPGAPGKLAPLSRVDIARAVGDQGLQGIEVGLRGDPGEGGINSKGTKGESGVYGIPGLQGPRGPMGERGPPGYQGPYGERGPRGQIGFPGPRDCGPSHKGRLGRALFLNFSKMGCHGCANRLTCNCDGIVGLPGEKGVRGIEGAEGNPGDTGPDGPPGPPGKEGIMGEWGETGEKGMRGDKGFQGPKGRAGLQGYPGPPGYPGPKGLDGCNGTDGAPGIAGIPGTSGKRGEFGADGQRVILKSLCTNSKYRSRKDLQYNCSTQNPPCSPLHTPLKWVDLTCKCTTNLQIQSPPCSPLHTPLKWVGSEGLPGLVGPPGAKG*****************QPAGLNFRPPCTILKDFKVLYRDFQMGLCAHQGSMGALGEVGPKGFQGEPGPKGYAGLAGLPGLNGTHGWPGEPGPRGPPGVKGEPGMDGDPGLSGNPWTLPKYLHLRRGQTRRAAAPRFEFQTPVHRLERFQSSLSGLSNGWCQPWDPGAENVGPTGVRGEDGDVGEPGPPGPIIEDTEQKPGNISYSFKGPKGMPGARGDRGPYGLKGERGVPGRPGIDGYPGIKGVKGV******************AGVKGDKGAPG***************DEGLPGLPGLQGPEGDRGIYDPTLDKIEPGVTGPQGPIGPRGEPGEDGYNGKPGPPGLQGRTGEPGPPGIVGPIGPKGISIPGEAGVDGTPGPPGQPGVYGPPGIPGLPGPKGQQGVTIIGPPGQDGVPGQDGFKGVQGDRGDPGVQESPAHVAHQTLSFGPRTPGGPNRKAFTAMNPLQGPYGAPGDEGRDGLPGRNGVPGSKGDPATIPKEYLRGDAGYDGLPGEPGTPGDMGLKGEAGDTISSEVNMKGEKGYPGPPGDQGAPGFEGEPGIPGDKGIPGDSGPIGEPGISLQGPTGFKGRPGRPGDWGPKGAQGATGIQGLPGLPGLPGAIGPQGEPGFPGYQGPKGPVGMRGPPGIPGAPGFEGEPGIPGDKGIPGDSGPIGEPGISLQGPTGFKGRPGRPGDWGPKGAQGATGIQGLPGLPSYSGQINKVYSINFILGDRGSVGESIFFPGPP**************EGPVGYRGIPGPDGRKGVSGPKGLPGLTGETGLPGLKGEEGDMLPGYPGTPGVPGIPGLKGIPGDKGSTGLDGEEGDMLPGYPGTPGVPGMPGLKGITGDKGSTGLDGTPGPDGDRGKKGSRGPLGPRGQQGDPGPDGIPGRPGRVLHPGATGIPGDKGDIGPPGSTGFVGKPGSTGFVGKPGLQGLPGNKGEQGRRGTPGPVGQMGPPGAKGVIGDYGDAGYPGEDGESAFSGLQGDKGEPGQTGPMGYPGLPGIPGEPGPLGDLGESIDGEPGYPGSNGRDGFNGLPGRPGNKVSINLICTDSVKRNELKPSHSLSGRPEGYPGLPGIPGEPGPLGDLGESIDGEPGYPGSNGRDGFNGLPGRPGNKVYLIVCVLIRYQVDLSDGTFQPYLSGLPDSVCAHQGSMGALGEVGPKGFQGEPGPKGYAGLAGLPGLNGTHGWPGEPGPRGPPGVKGEPGMDGDPGLSGNPGIPGDRGPRGGPGLSGAPGPKGEPGDIGLPENIIAATKGDFGEPGMTGLTGEKGWRGDVGWPGRNGTKGLPGAIGPQGEPGFPGYQGPKGPVGMRGPPGIPGLTDVMLAERGDPGRDGLPGRDGKPGLPGVKGAPGEYGIDGPPGPPGAPGLSRKGNPGKPGYPGRIVEGLPGLPGLPGEDGKPGTPGVRGEPGEPGRPIPGDGLPGRDGKPGLPGVKGAPGEYGIDGPPGPPGAPGLSRKGNPGKPGYPGRIVEGLPGLPGLPGED****************GSVGESIFFPGPP**************EGPVGYRGIPGPDGRKGVAGPKGLPGLTGETGLPQSVAVLPELKDKIVEMTEIVKESLSNAVISTKIVKKLSALPQINHALFGIAGTNGAKGETGPPGDTGVEGYPGTPGAKGDRGFIGDTGLPGMDGTPGEKGFQGEPGDTLAYNLQWTRGRAGEIGPRGDTLAYNLQWTRGRAGEIGPRGPVGFQGIPGAPGLPAPPPPPPPSRGFFLTFHSQTDMEPECPRYTSKLWSGYSLLHISGDNKAHTQDLGSPGSCLPRFSTMPFLFCSLTQTCDYASRGDNSYWLSSTEPMLKTMEPIPSADLKKYVSRCSVCESTTRAIAIHSQSVTIPSCPGGWEELWVGFSFLMHTDAGSGGGGQSLISPGSCLQDFRPTPFIQCHGVGSCNYYSTASSFWLATLDDRDQWRKPRPQTLKANDLKTRISRCAVCLRRKSEPGRLVRPVVEASRPVYEQRARPNYNVNRPSYDPNLNQAGYNPNLNRGGYDPNLNRAGYNPNLNRGGYDQSRGSYDPNQYRGYGQNRTIYDPLRARTYNVNRPEGYYYPGNS*********
********************************************************************************************************************************************************************************************************************************************************************CH*************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************D******************************************************************************************************************************************************************************************************************************************************************************************************************************LPD*******************************************************************************************************N***************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************GLPAPPPPPPPSRGFFLTFHSQTDMEPECPRYTSKLWSGYSLLHISGDNKAHTQDLGSPGSCLPRFSTMPFLFCSLTQTCDYASRGDNSYWLSSTEPMLKTMEPIPSADLKKYVSRCSVCESTTRAIAIHSQSVTIPSCPGGWEELWVGFSFLMHTDAGSGGGGQSLISPGSCLQDFRPTPFIQCHGVGSCNYYSTASSFWLATLDDRDQWRKPRPQTLKANDLKTRISRCAVCLRRKSEPGRLVRPVV*****************NRPSYDPNLNQAGYNPNLNRGGYDPNLNRAGYNPNLNRGGYDQSRGSYDPNQYRGYGQNRTIYDPLRARTYNVNRPEGYYYPG***********
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MDSKWLETGLQYPSIHQLGRGVYTLSSKAMWPKGIPGQGKPIRGPPGEPGSPGFPGLEGDVGFPGLPGRPGLKGPKGNDCGFCPPGRPGVKGEAGEAAINGIPGDPGAPGRMGEKGSRGPDGKMGPPGNKGLDGKHGTQGIEGPPGPPGAPGKLAPLSRVDIARAVGDQGLQGIEVGLRGDPGEGGINSKGTKGESGVYGIPGLQGPRGPMGERGPPGYQGPYGERGPRGQIGFPGPRDCGPSHKGRLGRALFLNFSKMGCHGCANRLTCNCDGIVGLPGEKGVRGIEGAEGNPGDTGPDGPPGPPGKEGIMGEWGETGEKGMRGDKGFQGPKGRAGLQGYPGPPGYPGPKGLDGCNGTDGAPGIAGIPGTSGKRGEFGADGQRVILKSLCTNSKYRSRKDLQYNCSTQNPPCSPLHTPLKWVDLTCKCTTNLQIQSPPCSPLHTPLKWVGSEGLPGLVGPPGAKGFPGQPGRKGEKAKPGGPQPAGLNFRPPCTILKDFKVLYRDFQMGLCAHQGSMGALGEVGPKGFQGEPGPKGYAGLAGLPGLNGTHGWPGEPGPRGPPGVKGEPGMDGDPGLSGNPWTLPKYLHLRRGQTRRAAAPRFEFQTPVHRLERFQSSLSGLSNGWCQPWDPGAENVGPTGVRGEDGDVGEPGPPGPIIEDTEQKPGNISYSFKGPKGMPGARGDRGPYGLKGERGVPGRPGIDGYPGIKGVKGVQGREGWRGKEGKDGRPGDAGVKGDKGAPGLAGRDGSPGEPGSKGDEGLPGLPGLQGPEGDRGIYDPTLDKIEPGVTGPQGPIGPRGEPGEDGYNGKPGPPGLQGRTGEPGPPGIVGPIGPKGISIPGEAGVDGTPGPPGQPGVYGPPGIPGLPGPKGQQGVTIIGPPGQDGVPGQDGFKGVQGDRGDPGVQESPAHVAHQTLSFGPRTPGGPNRKAFTAMNPLQGPYGAPGDEGRDGLPGRNGVPGSKGDPATIPKEYLRGDAGYDGLPGEPGTPGDMGLKGEAGDTISSEVNMKGEKGYPGPPGDQGAPGFEGEPGIPGDKGIPGDSGPIGEPGISLQGPTGFKGRPGRPGDWGPKGAQGATGIQGLPGLPGLPGAIGPQGEPGFPGYQGPKGPVGMRGPPGIPGAPGFEGEPGIPGDKGIPGDSGPIGEPGISLQGPTGFKGRPGRPGDWGPKGAQGATGIQGLPGLPSYSGQINKVYSINFILGDRGSVGESIFFPGPPGTPGRPGSKGEPGDEGPVGYRGIPGPDGRKGVSGPKGLPGLTGETGLPGLKGEEGDMLPGYPGTPGVPGIPGLKGIPGDKGSTGLDGEEGDMLPGYPGTPGVPGMPGLKGITGDKGSTGLDGTPGPDGDRGKKGSRGPLGPRGQQGDPGPDGIPGRPGRVLHPGATGIPGDKGDIGPPGSTGFVGKPGSTGFVGKPGLQGLPGNKGEQGRRGTPGPVGQMGPPGAKGVIGDYGDAGYPGEDGESAFSGLQGDKGEPGQTGPMGYPGLPGIPGEPGPLGDLGESIDGEPGYPGSNGRDGFNGLPGRPGNKVSINLICTDSVKRNELKPSHSLSGRPEGYPGLPGIPGEPGPLGDLGESIDGEPGYPGSNGRDGFNGLPGRPGNKVYLIVCVLIRYQVDLSDGTFQPYLSGLPDSVCAHQGSMGALGEVGPKGFQGEPGPKGYAGLAGLPGLNGTHGWPGEPGPRGPPGVKGEPGMDGDPGLSGNPGIPGDRGPRGGPGLSGAPGPKGEPGDIGLPENIIAATKGDFGEPGMTGLTGEKGWRGDVGWPGRNGTKGLPGAIGPQGEPGFPGYQGPKGPVGMRGPPGIPGLTDVMLAERGDPGRDGLPGRDGKPGLPGVKGAPGEYGIDGPPGPPGAPGLSRKGNPGKPGYPGRIVEGLPGLPGLPGEDGKPGTPGVRGEPGEPGRPIPGDGLPGRDGKPGLPGVKGAPGEYGIDGPPGPPGAPGLSRKGNPGKPGYPGRIVEGLPGLPGLPGEDGKPGTPGGQSGGKGDRGSVGESIFFPGPPGTPGRPGSKGEPGDEGPVGYRGIPGPDGRKGVAGPKGLPGLTGETGLPQSVAVLPELKDKIVEMTEIVKESLSNAVISTKIVKKLSALPQINHALFGIAGTNGAKGETGPPGDTGVEGYPGTPGAKGDRGFIGDTGLPGMDGTPGEKGFQGEPGDTLAYNLQWTRGRAGEIGPRGDTLAYNLQWTRGRAGEIGPRGPVGFQGIPGAPGLPAPPPPPPPSRGFFLTFHSQTDMEPECPRYTSKLWSGYSLLHISGDNKAHTQDLGSPGSCLPRFSTMPFLFCSLTQTCDYASRGDNSYWLSSTEPMLKTMEPIPSADLKKYVSRCSVCESTTRAIAIHSQSVTIPSCPGGWEELWVGFSFLMHTDAGSGGGGQSLISPGSCLQDFRPTPFIQCHGVGSCNYYSTASSFWLATLDDRDQWRKPRPQTLKANDLKTRISRCAVCLRRKSEPGRLVRPVVEASRPVYEQRARPNYNVNRPSYDPNLNQAGYNPNLNRGGYDPNLNRAGYNPNLNRGGYDQSRGSYDPNQYRGYGQNRTIYDPLRARTYNVNRPEGYYYPGNSTRQGQTLRS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query2564 2.2.26 [Sep-21-2011]
P171391759 Collagen alpha-1(IV) chai yes N/A 0.611 0.890 0.392 0.0
P081201779 Collagen alpha-1(IV) chai no N/A 0.574 0.828 0.373 0.0
P273931763 Collagen alpha-2(IV) chai N/A N/A 0.437 0.636 0.412 1e-164
Q140311691 Collagen alpha-6(IV) chai yes N/A 0.582 0.882 0.376 1e-163
P081221707 Collagen alpha-2(IV) chai no N/A 0.517 0.776 0.361 1e-154
P171401758 Collagen alpha-2(IV) chai no N/A 0.449 0.655 0.391 1e-151
P024621669 Collagen alpha-1(IV) chai no N/A 0.399 0.613 0.398 1e-139
P085721712 Collagen alpha-2(IV) chai no N/A 0.367 0.550 0.405 1e-138
Q019551670 Collagen alpha-3(IV) chai no N/A 0.267 0.410 0.367 1e-104
Q282471691 Collagen alpha-5(IV) chai no N/A 0.085 0.130 0.557 2e-86
>sp|P17139|CO4A1_CAEEL Collagen alpha-1(IV) chain OS=Caenorhabditis elegans GN=emb-9 PE=1 SV=4 Back     alignment and function desciption
 Score =  696 bits (1795), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 747/1903 (39%), Positives = 900/1903 (47%), Gaps = 336/1903 (17%)

Query: 690  GLKGERGVPGRPGIDGYPGIKGVKGVQGREGWRGKEGKDGRPGDAGVKGDKGAPGLAGRD 749
            G KGERG PG  G  G+PG  G  G +G  G  G  G +G  GD G KG +G  GL    
Sbjct: 43   GTKGERGNPGFGGEPGHPGAPGQDGPEGAPGAPGMFGAEGDFGDMGSKGARGDRGL---- 98

Query: 750  GSPGEPGSKGDEGLPGLPGLQGPEGDRGIYDPTLDKIEPGVTGPQGPIGPRGEPGEDGYN 809
              PG PG  G +GL GLPGL+G EG  G                          G DG+ 
Sbjct: 99   --PGSPGHPGLQGLDGLPGLKGEEGIPGCN------------------------GTDGFP 132

Query: 810  GKPG---PPGLQGRTGEPGPPGIVGPIGPKGISIPGEAGVDGTPGPPGQPGVYGPPGIPG 866
            G PG   PPG  G+ G PG PG+ GP G  G++  G  GV G  G  G PG+ G  G PG
Sbjct: 133  GMPGLAGPPGQSGQNGNPGRPGLSGPPGEGGVNSQGRKGVKGESGRSGVPGLPGNSGYPG 192

Query: 867  LPGPKGQQGVTIIGPPGQDGVPGQDGFKGVQGDRGDPGVQESPAHVAHQTLSFGPRTPGG 926
            L G KG  G     P G  G PG  G KG  G R   GV+              P +   
Sbjct: 193  LKGAKGDPG-----PYGLPGFPGVSGLKGRMGVR-TSGVKGEKGLPGPPGPPGQPGSY-- 244

Query: 927  PNRKAFTAMNPLQGPYG---APGDEGRDGL---PGRNGVPGSKGDPATIPKEYLRGDAGY 980
            P       M  LQGP G     G++GRDG    PG  G+ G  G P    ++   GDAG 
Sbjct: 245  PWASKPIEMEVLQGPVGPAGVKGEKGRDGPVGPPGMLGLDGPPGYPGLKGQKGDLGDAGQ 304

Query: 981  DGLPGEPGTPGDMGLKGEAGDTISSEVNMKGEKGYPGPPGDQGAPGFEGEPGIPGDKGI- 1039
             G  G+ G PG+ G KG  G     E  + G  GYPG  G  G PG+ G PG  GD G  
Sbjct: 305  RGKRGKDGVPGNYGEKGSQG-----EQGLGGTPGYPGTKGGAGEPGYPGRPGFEGDCGPE 359

Query: 1040 ------PGDSGPIGEPGIS-LQGPTGFKGRPGRPGDWGPKGAQGATGIQGLPGLPGLPGA 1092
                   G++GP G  G   +QG  G  G  G PG  GP+G  GA G  G PG+ G+PG 
Sbjct: 360  GPLGEGTGEAGPHGAQGFDGVQGGKGLPGHDGLPGPVGPRGPVGAPGAPGQPGIDGMPGY 419

Query: 1093 I--GPQGEPGFPGYQGPKGPVG-----------------MRGPPGIPGAPGFEGEPGIPG 1133
               G +GE G+PG+ G  G  G                 ++GPPG+ G  G +G PGIPG
Sbjct: 420  TEKGDRGEDGYPGFAGEPGLPGEPGDCGYPGEDGLPGYDIQGPPGLDGQSGRDGFPGIPG 479

Query: 1134 DKGIPGDSGPIGEPGISLQ--GPTGFKGRPGRPGDWGPKGAQGATGIQGLPGLPSYSGQI 1191
            D G PG SG  G PG  +   GP G  G PG PG        G  G+ G PG P  +G+ 
Sbjct: 480  DIGDPGYSGEKGFPGTGVNKVGPPGMTGLPGEPG------MPGRIGVDGYPGPPGNNGER 533

Query: 1192 NKV--YSINFILGDRGSVGESIFFP--------------GPPGTPGRPGSKGEPGDEGPV 1235
             +   Y  + + G+ G  G                    G PG PG+P S G  G  G  
Sbjct: 534  GEDCGYCPDGVPGNAGDPGFPGMNGYPGPPGPNGDHGDCGMPGAPGKPRSAGSDGLSGSP 593

Query: 1236 GYRGIPGPDGRKGVSG--------PKGLPGLTGETGLPGLKGEEGD-------------M 1274
            G  GIPG  G KG +G        P G+PGL G+ GLPGL G  G               
Sbjct: 594  GLPGIPGYPGMKGEAGEIVGPMENPAGIPGLKGDHGLPGLPGRPGSDGLPGYPGGPGQNG 653

Query: 1275 LPGYPGTPGVPGIPGLKGIPGDKGSTGLDGEEGDMLPGYPGTPGVPGMPGLKGITGDKGS 1334
             PG  G PG+ GI G +G  G  G  GL G  GD  PG PGTPG             KG 
Sbjct: 654  FPGLQGEPGLAGIDGKRGRQGSLGIPGLQGPPGDSFPGQPGTPGY------------KGE 701

Query: 1335 TGLDGTPGPDGDRGKKGSRGPLGPRGQ-QGDPGPDGIPGRPGRVLHPGATGIPGDKGDIG 1393
             G DG PG  G +G +G   PL    Q  G PG DG+PG PG     GA G+PG  G +G
Sbjct: 702  RGADGLPGLPGAQGPRGIPAPLRIVNQVAGQPGVDGMPGLPGDR---GADGLPGLPGPVG 758

Query: 1394 PPGSTGFVGKPGSTGFVGKPGLQGLPGNKGEQGRRGTPGPVGQMGPPGAKGVIGDYGDAG 1453
            P G  G  G+ G  G  G PGL G PG +G+QG  G  G  G  G PG  G  G  G  G
Sbjct: 759  PDGYPGTPGERGMDGLPGFPGLHGEPGMRGQQGEVGFNGIDGDCGEPGLDGYPGAPGAPG 818

Query: 1454 YPGEDG-----ESAFSGLQGDKGEPGQTGPMGYPGLPGIPGEPGPLGDLGESIDGEPGYP 1508
             PGE G     +  + G  GD G  G  GP GYPG  G+PG PG              YP
Sbjct: 819  APGETGFGFPGQVGYPGPNGDAGAAGLPGPDGYPGRDGLPGTPG--------------YP 864

Query: 1509 GSNGRDGFNGLPGRPGNKVSINLICTDSVKRNELKPSHSLSGRPEGYPGLPGIPGEPGPL 1568
            G  G +G +G PG+PG++    L+  D  K  +  P         GY G  G PG+ G  
Sbjct: 865  GEAGMNGQDGAPGQPGSRGESGLVGIDGKKGRDGTPGTRGQDGGPGYSGEAGAPGQNGMD 924

Query: 1569 GDLGESIDGEPGYPGSNGRDGFNGLPGRPGNKVYLIVCVLIRYQVDLSDGTFQPYLSGLP 1628
            G  G    G+ GYPGS G+DG+ G  G PG    +    L     D          +GLP
Sbjct: 925  GYPGAP--GDQGYPGSPGQDGYPGPSGIPGEDGLVGFPGLRGEHGD----------NGLP 972

Query: 1629 DSVCAHQGSMGALGEVGPKGFQGEPGPKGYAGLAGLPGLNGTHGWPGEPGPRGPPGVKGE 1688
                            G  G  G PG  G  GL GLPG +G  G+ GE G  G PG +G+
Sbjct: 973  GLEGECGEEG----SRGLDGVPGYPGEHGTDGLPGLPGADGQPGFVGEAGEPGTPGYRGQ 1028

Query: 1689 PGMDGDPGLSGNPG------------------IPGDRGPRGGPGLS--GAPGPKGEPGDI 1728
            PG  G+    G PG                  +PG  G RG  G S  G PG  G+PGD 
Sbjct: 1029 PGEPGNLAYPGQPGDVGYPGPDGPPGLPGQDGLPGLNGERGDNGDSYPGNPGLSGQPGDA 1088

Query: 1729 GLPENIIAATKGDFGEPGMTGLTGEKGWRGDVGWPGRNGTKGLPGAIGPQGE-------- 1780
            G   + +    G  G PG+TG+ G KG  G  G PGR G  G+PG  G +GE        
Sbjct: 1089 GY--DGLDGVPGPPGYPGITGMPGLKGESGLPGLPGRQGNDGIPGQPGLEGECGEDGFPG 1146

Query: 1781 -PGFPGYQGPKGPVGMRGPPGIPGLTDVMLAERGDPGRDGLPGRDGKPGLPGVKGAPGEY 1839
             PG PGY G +G  G +G PGIPG  + +   RG  G+ GL G +G  G PG  G+ G+ 
Sbjct: 1147 SPGQPGYPGQQGREGEKGYPGIPG-ENGLPGLRGQDGQPGLKGENGLDGQPGYPGSAGQL 1205

Query: 1840 GIDGPPGPPGAPGLS-RKGNPGKPGYPG-RIVEGLPGLPGLPGEDGK------------P 1885
            G  G  G PGAPG +   GN G+ G PG R   G PG PGLPG DG+            P
Sbjct: 1206 GTPGDVGYPGAPGENGDNGNQGRDGQPGLRGESGQPGQPGLPGRDGQPGPVGPPGDDGYP 1265

Query: 1886 GTPG--VRGEPGEPGRPIPGDGLPGRDGKPGLPGVKGAPGEYG---------------ID 1928
            G PG  + G PG+ G+    DG PG DG PG PG+ G PG  G               + 
Sbjct: 1266 GAPGQDIYGPPGQAGQ----DGYPGLDGLPGAPGLNGEPGSPGQYGMPGLPGGPGESGLP 1321

Query: 1929 GPPGPPGAPGLSRK----GNPGKPGYPGRIVEGLPGLPGLPGEDGKPGTPG--GQSGGKG 1982
            G PG  G PGL  K    G PG PG PG  VEG+PGL G  GEDG PG PG  G +G  G
Sbjct: 1322 GYPGERGLPGLDGKRGHDGLPGAPGVPG--VEGVPGLEGDCGEDGYPGAPGAPGSNGYPG 1379

Query: 1983 DRGSVGESIFFPGPPGTPGRPGSKGEPGDEGPVGYRGIPGPDGRKGVAGPKGLPGLTGET 2042
            +RG        PG PG  GR G  G PG  G  G +G  G DG  G  G  GLPG  G  
Sbjct: 1380 ERG-------LPGVPGQQGRSGDNGYPGAPGQPGIKGPRGDDGFPGRDGLDGLPGRPGRE 1432

Query: 2043 GLPQSVAVLPELKDKIVEMTEIVKESLSNAVISTKIVKKLSALPQINHALFGIAGTNGAK 2102
            GLP  +A+                            V+     P  N       G  G K
Sbjct: 1433 GLPGPMAM---------------------------AVRNPPGQPGEN-------GYPGEK 1458

Query: 2103 GETGPPGDTGVEGYPGT---PGAKGDRGFIGDTGLPGMDGTPGEKGFQGEPGDTLAYNLQ 2159
            G  G PGD G+ G PG    PGA G  G+ G  GL GM G  G++GFQG  G T      
Sbjct: 1459 GYPGLPGDNGLSGPPGKAGYPGAPGTDGYPGPPGLSGMPGHGGDQGFQGAAGRT------ 1512

Query: 2160 WTRGRAGEIGPRGDTLAYNLQWTRGRAGEIGPRGPVGFQGIPGAPGLPAPPPPPPPSRGF 2219
                                                G  G+PG PG P  P    PSRGF
Sbjct: 1513 ------------------------------------GNPGLPGTPGYPGSPGGWAPSRGF 1536

Query: 2220 FLTFHSQTDMEPECPRYTSKLWSGYSLLHISGDNKAHTQDLGSPGSCLPRFSTMPFLFCS 2279
                HSQT   P+CP   S+LW GYSLL++ G+ +A  QDLG PGSCL +F+TMPF+FC+
Sbjct: 1537 TFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN 1596

Query: 2280 LTQTCDYASRGDNSYWLSSTEPMLKTMEPIPSADLKKYVSRCSVCESTTRAIAIHSQSVT 2339
            +   C  +SR D S+WLS+ EPM   M P+    ++ Y+SRC+VCE  T+ IA+HSQ  +
Sbjct: 1597 MNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTS 1656

Query: 2340 IPSCPGGWEELWVGFSFLMHTDAGSGGGGQSLISPGSCLQDFRPTPFIQCHGVGSCNYYS 2399
            +P CP GW  +W G+SF+MHT AG+ G GQSL SPGSCL++FR  PFI+CHG G+CNYY+
Sbjct: 1657 VPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGRGTCNYYA 1716

Query: 2400 TASSFWLATLDDRDQWRKPRPQTLKANDLKTRISRCAVCLRRK 2442
            T   FWL+ +D   Q+RKP  QTLKA  LK R+SRC VCL+ +
Sbjct: 1717 TNHGFWLSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVCLKNR 1759
Collagen type IV is specific for basement membranes.
Caenorhabditis elegans (taxid: 6239)
>sp|P08120|CO4A1_DROME Collagen alpha-1(IV) chain OS=Drosophila melanogaster GN=Cg25C PE=2 SV=3 Back     alignment and function description
>sp|P27393|CO4A2_ASCSU Collagen alpha-2(IV) chain OS=Ascaris suum PE=2 SV=1 Back     alignment and function description
>sp|Q14031|CO4A6_HUMAN Collagen alpha-6(IV) chain OS=Homo sapiens GN=COL4A6 PE=2 SV=3 Back     alignment and function description
>sp|P08122|CO4A2_MOUSE Collagen alpha-2(IV) chain OS=Mus musculus GN=Col4a2 PE=2 SV=4 Back     alignment and function description
>sp|P17140|CO4A2_CAEEL Collagen alpha-2(IV) chain OS=Caenorhabditis elegans GN=let-2 PE=1 SV=2 Back     alignment and function description
>sp|P02462|CO4A1_HUMAN Collagen alpha-1(IV) chain OS=Homo sapiens GN=COL4A1 PE=1 SV=3 Back     alignment and function description
>sp|P08572|CO4A2_HUMAN Collagen alpha-2(IV) chain OS=Homo sapiens GN=COL4A2 PE=1 SV=4 Back     alignment and function description
>sp|Q01955|CO4A3_HUMAN Collagen alpha-3(IV) chain OS=Homo sapiens GN=COL4A3 PE=1 SV=3 Back     alignment and function description
>sp|Q28247|CO4A5_CANFA Collagen alpha-5(IV) chain OS=Canis familiaris GN=COL4A5 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query2564
3287235151760 PREDICTED: collagen alpha-1(IV) chain-li 0.622 0.906 0.398 0.0
3072008161808 Collagen alpha-1(IV) chain [Harpegnathos 0.643 0.912 0.386 0.0
3320299591705 Collagen alpha-1(IV) chain [Acromyrmex e 0.600 0.902 0.401 0.0
1700376581785 collagen alpha-2(IV) chain [Culex quinqu 0.592 0.850 0.386 0.0
2700076441814 hypothetical protein TcasGA2_TC014326 [T 0.595 0.841 0.398 0.0
910830011847 PREDICTED: similar to collagen alpha-2(I 0.594 0.825 0.397 0.0
3504185391839 PREDICTED: collagen alpha-2(IV) chain-li 0.620 0.865 0.391 0.0
3085013331804 CRE-EMB-9 protein [Caenorhabditis remane 0.622 0.884 0.396 0.0
2685735861759 C. briggsae CBR-EMB-9 protein [Caenorhab 0.624 0.910 0.402 0.0
384252261 4971 hypothetical protein COCSUDRAFT_40018 [C 0.757 0.390 0.292 0.0
>gi|328723515|ref|XP_001951336.2| PREDICTED: collagen alpha-1(IV) chain-like isoform 1 [Acyrthosiphon pisum] gi|328723517|ref|XP_003247862.1| PREDICTED: collagen alpha-1(IV) chain-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 768/1926 (39%), Positives = 956/1926 (49%), Gaps = 331/1926 (17%)

Query: 658  IIEDTEQKPGN-ISYSFKGP-KGMPGARGDRGPYGLKGERGVPGRPGIDGYPGIKGVKGV 715
            ++++T+Q      S  FK   KG+ G  GD+G +G +G  G PG  G DG PG KG KG 
Sbjct: 24   MVQETQQAACRGCSNPFKCDCKGIVGEPGDKGIFGQQGSEGAPGETGPDGPPGTKGEKGS 83

Query: 716  ---QGREGWRGKEGKDGRPGDAGVKGDKGAPGLAGRDGSPGEPGSKGDEGLPGLPGLQGP 772
                G  G +G  G++G  G  G+ GDKG PG AG  G  G  G  G +G  GL G  G 
Sbjct: 84   IGDWGDLGLKGYRGENGLTGHHGIDGDKGYPGAAGPPGLKGLEGCNGTDGNDGLMGEDGY 143

Query: 773  EGDRGIYDPTLDKIEPGVTGPQGPIGPRGEPGEDGYNGKPGPPGLQGRTGEPGPPGIVGP 832
             G+RG+            TG  G  G RG+PG+ G N K    GL+G  GE   PG+ G 
Sbjct: 144  PGERGL------------TGLDGLQGLRGDPGDGGANSK----GLKGERGESSLPGVKGE 187

Query: 833  IGPKGISIPGEAGVDGTPGPPGQPGVYGPPGIPGLPGPKGQQGVTIIGPPGQDGVPGQDG 892
                    PG  G++G  G  G PGV GP G PG  G KG +G         D  PG  G
Sbjct: 188  --------PGYPGIEGVQGDIGVPGVQGPTGDPGYDGLKGDEG---------DSQPGYKG 230

Query: 893  FKGVQGDRGDPGVQESPAHVAHQTLSFGPRTPGGPNRKAFTAMNPLQGPYGAPGDEGRDG 952
              G  GDRG+PG    P+ +     S  P     P+   +  +   +GP    GD GR G
Sbjct: 231  SIGDDGDRGEPG---EPSTIEIDNPSVQP-----PDLIVYKGLPGNRGPR---GDNGRPG 279

Query: 953  LPGRNGVPGSKGDPATIPKEYLRGDAGYDGLPGEPGTPGDMGLKGEAGDT-ISSEVNMKG 1011
              G  G  G KG P            GYDG  G  G  G++G +G+ G+  I  E  +KG
Sbjct: 280  YKGEIGTKGLKGRP------------GYDGFKGVKGAQGNVGQRGKDGNVGIFGESGIKG 327

Query: 1012 EKGYPGPPGDQGAPGFEGEPGIPGDKGIPGDSGPIGEPGISLQGPTGFKGRPGRPGDWGP 1071
            +KG PG  G  G  G +G  G PG  GIPG  G  GEPGI    P   + R G  G  GP
Sbjct: 328  DKGAPGYSGLAGEDGDKGGNGEPGRLGIPGVQGSEGEPGI--YDPNLDEIRNGSEGPQGP 385

Query: 1072 KGAQGATGIQGLPGLPGLPGAIGPQGEPGFPGYQGPKGPVG--MRGPPGIPGAPGFEGEP 1129
             G +G  G  GLPG  G  G +GP GEPG PG  G +GP G  M+G  GI G  G  GE 
Sbjct: 386  IGPEGPRGEDGLPGRIGQQGIMGPPGEPGPPGIPGARGPKGLSMKGEQGIEGLAGPRGE- 444

Query: 1130 GIPGDKGIPGDSGPIGEP---GISLQGPTGFKGRPGRPGDWGPKGAQGATGIQGLPGLPS 1186
               G  G+PG  GPIGE    GI++ GP G  GR GR G  GPKG QG  G +G  G P+
Sbjct: 445  --QGPLGVPGPIGPIGEKGIHGITVFGPPGEDGRLGRDGSEGPKGDQGDQGFKGPKGFPA 502

Query: 1187 YSGQINKVYSINFILGDRGSVGESIF-----FPGPPGTPGRPGSKGEPGDEGPVGYRGIP 1241
                         I+G RG+ G   F      PG PG PGR GSKG  GD+      GI 
Sbjct: 503  -------TRPGERIVGPRGAPGIPGFSGIPGVPGFPGLPGRNGSKGLRGDDCGYCNPGID 555

Query: 1242 GPDGRKGVSGPKGLPGLTGETGLPGLKGEEGDM----LPGYPGTPGVPGIPGLK---GIP 1294
            GP G  GV G  G PG  G  GL G++G +G M    LPGY G+ G PG  GL    G+P
Sbjct: 556  GPKGDVGVDGQNGAPGPPGSAGLNGIRGTKGKMGAPGLPGYKGSSGRPGSRGLAGYPGMP 615

Query: 1295 GDKGSTGLDGEEGDMLPGYPGTPGVPGMPGLKGITGDKGSTGLDGTPGPDGDRGKKGSRG 1354
            G++G+    G +  ++ G  G  G PG        GD GS GL G  G  G  G+KG +G
Sbjct: 616  GERGTVIFVGVKQTLISGEKGPKGFPGR------EGDMGSIGLPGLSGLPGRMGRKGMKG 669

Query: 1355 PLGPRGQQGDPGPDGIPGRPGRVLHPGATGIPGD-------KGDIGPPGSTGFVGKPGST 1407
                 G  G PG DG PG  GR   PG  G P D       KGD G PG TG  G+ G+ 
Sbjct: 670  HY---GDSGLPGTDGRPGEHGR---PGLKGDPADELNPEYLKGDEGYPGITGTKGEQGNA 723

Query: 1408 GFVGKPG--LQGLPGNKGEQGRRGTPGPVGQMGPPGAKGVIGDYGDAGYPGED------- 1458
            G  G+PG   Q    N GE+G +G PG  GQ G  G KGV GD G  G+ G         
Sbjct: 724  GAPGEPGDSSQYTATNIGERGIKGIPGEKGQHGLKGQKGVEGDQGFVGFSGAAGPPGIVT 783

Query: 1459 ----------GESAFSGLQGDKGEPGQTGPMGYPGLP------GIPGEPGPLGDLGES-- 1500
                      G     GL+G+KG PG+TGP+G PG P      G PG+   +G++G++  
Sbjct: 784  DGPPGLKGYPGAMGDQGLKGEKGFPGKTGPVGLPGPPTQKGDRGEPGQSILVGEIGDNGI 843

Query: 1501 --------------------IDGEPGYPGSNGRDGFNGLPGRPGNKVSINLICTDSVKRN 1540
                                +D E G  G  G  G  GL GRPG K    +         
Sbjct: 844  KGEKGEPGEEGIGGNRGYPGLDAEFGPKGQKGSPGIIGLAGRPGTKGERGI--------- 894

Query: 1541 ELKPSHSLSGRPEGYPGLPGIPGEPGPLGDLG-ESIDGEPGYPGSNGRDGFNGLPGRPGN 1599
                  S+ G P G PG PG+ G     G +G + IDGEPG+ G+ G  G  GL G  G 
Sbjct: 895  ------SIRG-PAGLPGAPGLAGLSIGFGSVGPKGIDGEPGFNGTKGLKGEWGLVGLRG- 946

Query: 1600 KVYLIVCVLIRYQVDLSDGTFQPYLSGLPDSVCAHQGSMGALGEVGPKGFQGE---PGPK 1656
                         +D   G         P+      G MG LG+ GP G  GE   PG K
Sbjct: 947  -------------IDGDRG---------PEGKQGRNGQMGKLGDSGPTGDTGETGVPGLK 984

Query: 1657 GYAGLAGLPGLNGTHGWPGEPGPRGPPGVKGEPGMDGDPGLSGNPGIPGDRGPRGGPGLS 1716
            GY G  G+ G  G  G  G+ G  G PG+KG+ G  G  G  G PG+PG RG     G  
Sbjct: 985  GYDGRQGIFGQIGEKGSRGDFGMEGAPGLKGQLGEKGLTGNQGLPGLPGIRGDYSFSGPQ 1044

Query: 1717 GAPGPKGEPGDIG-LPENIIAATKGDFGEPGMT--GLTGEKGWRGD---VGWPGRNGTKG 1770
            G  G  G  GDIG      +   KG  G+ G T  GL GEKG +G+    G PG++G KG
Sbjct: 1045 GETGATGRVGDIGPTGYRGLDGQKGMRGDNGTTEIGLAGEKGSKGEPGIDGKPGQSGRKG 1104

Query: 1771 LPGAIGPQGEPGFPGYQGPKGPVGMRGPPGIPGLT--------DVMLAERGDPGRDGLPG 1822
            L G +G  G+ G  G +GPKG  G++G  GI G+           +   +G  G DG+PG
Sbjct: 1105 LMGDLGMVGDKGIIGDEGPKGYPGLKGRSGISGVKGPPGSPGIPGIPGNKGQRGLDGMPG 1164

Query: 1823 RDGKPGLPG----------------------------VKGAPGEYG------IDGPPGPP 1848
               KPGLPG                            + G  GE G      + G  GPP
Sbjct: 1165 EIAKPGLPGDPGYRGAIGFEGLKGFKGLSGDPGYEGFIIGTKGESGDRGHVHLRGSTGPP 1224

Query: 1849 GAPGLS-RKGNPGKPGYPGRI-VEGLPGLPGLPGE------DGKPGTPGVRGEPGEPGRP 1900
            G PGL   KG  G  G  G I + G  G+ G+ GE      +G PG PG   E GE GR 
Sbjct: 1225 GLPGLQGIKGAKGVSGDEGAIGLIGFTGIYGIKGEQGDTGPEGLPGIPGSFPEHGEKGR- 1283

Query: 1901 IPGDGLPGRDGKPGLPGVKGAPGEYGIDGPPGPPGAPGLSRKGNPGKPGYPGRIVEGLPG 1960
                G+ G  G PG+ G KGAPGEYG DG  G  G  G+S KG  GK G  G  ++G PG
Sbjct: 1284 ---SGIDGVPGSPGIDGQKGAPGEYGNDGIAGYAGPRGISPKGEKGKSGPRGESIQGEPG 1340

Query: 1961 LPGLPGEDGKPGTPGGQSGGKGDRGSVGESIFF----PGPPGTPGRPGSKGEPGDEGPVG 2016
              G+PG++G+P    G+ G KG +G  G + +      G  G+PG  G +GE G+ G VG
Sbjct: 1341 ANGVPGKNGEP----GRQGLKGLKGEPGIAKYSQKGEQGEFGSPGLFGLQGEKGEIGEVG 1396

Query: 2017 YRGIPGPDGRKGVAGPKGLPGLTGETGLPQSVAVLPELKDKIVEMTEIVKESLSNAVIST 2076
            + G+ G  G KG+ G  G PG++G  G+P                               
Sbjct: 1397 FEGMTGVPGLKGIQGIPGQPGISGFMGIP------------------------------- 1425

Query: 2077 KIVKKLSALPQINHALFGIAGTNGAKGETGPPGDTGVEGYPGTPGAKGDRGFIGDTGLPG 2136
                             GI G  G  GE+    +T + G PG  G           GL G
Sbjct: 1426 -----------------GIKGKKGDIGESLFYNETQLRGMPGEDGY---------PGLTG 1459

Query: 2137 MDGTPGEKGFQGEPGDTLAYNLQWTRGRAGEIGPRGDTLAYNLQWTRGRAGEIGPRGPVG 2196
            + G PGE  + G  G      L+   G  G  G  G      L+   GR G  G  GP G
Sbjct: 1460 LRGQPGENKYNGRDG------LKGENGDDGFPGLPGKKGLKGLKGQMGRQGNQGKYGPRG 1513

Query: 2197 FQGIPGAPGLPAPPPPPPPSRGFFLTFHSQTDMEPECPRYTSKLWSGYSLLHISGDNKAH 2256
            + G PG+PG  A P  P P +G F T+HSQTD+ P CP+ T +LWSGYSLLH   + KAH
Sbjct: 1514 YTGRPGSPGSDALPMKPQPHQGNFFTYHSQTDIIPACPKNTVQLWSGYSLLHFMSNAKAH 1573

Query: 2257 TQDLGSPGSCLPRFSTMPFLFCSLTQTCDYASRGDNSYWLSSTEPMLKTMEPIPSADLKK 2316
             QDLG+PGSCL +F+TMPFLFC + + C+Y SR D SYWLS+ EPM   M PI   D+ K
Sbjct: 1574 GQDLGAPGSCLRKFNTMPFLFCDVNEVCNYGSRNDYSYWLSTPEPMPLMMTPILGLDISK 1633

Query: 2317 YVSRCSVCESTTRAIAIHSQSVTIPSCPGGWEELWVGFSFLMHTDAGSGGGGQSLISPGS 2376
            ++SRCSVCE+ T+ IA+HSQS+ IP CP GW ELW+G+SF+MHTD+G+ GGGQSL+SPGS
Sbjct: 1634 FISRCSVCEAPTKVIAVHSQSMAIPECPNGWSELWIGYSFIMHTDSGADGGGQSLVSPGS 1693

Query: 2377 CLQDFRPTPFIQCHGVGSCNYYSTASSFWLATLDDRDQWRKPRPQTLKANDLKTRISRCA 2436
            CL++FRP PFI+CHG+G CN+Y+TA S+WL+T++DRD +RKPRPQTLK N L+TRISRC+
Sbjct: 1694 CLEEFRPRPFIECHGIGRCNFYTTAYSYWLSTIEDRDMFRKPRPQTLKQNTLQTRISRCS 1753

Query: 2437 VCLRRK 2442
            VCLR +
Sbjct: 1754 VCLRNR 1759

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|307200816|gb|EFN80869.1| Collagen alpha-1(IV) chain [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|332029959|gb|EGI69784.1| Collagen alpha-1(IV) chain [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|170037658|ref|XP_001846673.1| collagen alpha-2(IV) chain [Culex quinquefasciatus] gi|167880957|gb|EDS44340.1| collagen alpha-2(IV) chain [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|270007644|gb|EFA04092.1| hypothetical protein TcasGA2_TC014326 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|91083001|ref|XP_974458.1| PREDICTED: similar to collagen alpha-2(IV) chain [Tribolium castaneum] Back     alignment and taxonomy information
>gi|350418539|ref|XP_003491890.1| PREDICTED: collagen alpha-2(IV) chain-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|308501333|ref|XP_003112851.1| CRE-EMB-9 protein [Caenorhabditis remanei] gi|308265152|gb|EFP09105.1| CRE-EMB-9 protein [Caenorhabditis remanei] Back     alignment and taxonomy information
>gi|268573586|ref|XP_002641770.1| C. briggsae CBR-EMB-9 protein [Caenorhabditis briggsae] Back     alignment and taxonomy information
>gi|384252261|gb|EIE25737.1| hypothetical protein COCSUDRAFT_40018 [Coccomyxa subellipsoidea C-169] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query2564
UNIPROTKB|J9P9L41691 COL4A5 "Collagen alpha-5(IV) c 0.132 0.200 0.473 1.1e-211
UNIPROTKB|Q282471691 COL4A5 "Collagen alpha-5(IV) c 0.132 0.200 0.473 1.4e-211
UNIPROTKB|F1N4741688 COL4A5 "Uncharacterized protei 0.132 0.200 0.476 2.5e-202
UNIPROTKB|F1Q0F71678 COL4A5 "Collagen alpha-5(IV) c 0.131 0.200 0.467 3e-201
UNIPROTKB|F1NDF51658 COL4A5 "Uncharacterized protei 0.133 0.206 0.485 3.1e-200
UNIPROTKB|P024621669 COL4A1 "Collagen alpha-1(IV) c 0.134 0.206 0.480 4.4e-200
RGD|15654991645 Col4a5 "collagen, type IV, alp 0.132 0.206 0.470 2.7e-198
UNIPROTKB|F1PH051693 COL4A5 "Collagen alpha-5(IV) c 0.132 0.200 0.473 3.9e-197
MGI|MGI:884541669 Col4a1 "collagen, type IV, alp 0.134 0.206 0.477 6e-197
ZFIN|ZDB-GENE-030131-22811659 col4a5 "collagen, type IV, alp 0.134 0.208 0.469 9.3e-197
UNIPROTKB|J9P9L4 COL4A5 "Collagen alpha-5(IV) chain" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
 Score = 891 (318.7 bits), Expect = 1.1e-211, Sum P(7) = 1.1e-211
 Identities = 171/361 (47%), Positives = 227/361 (62%)

Query:  2094 GIAGTNGAKGETGPPGDTGVEGYPGTPGAKGDRG--FI--GDTGLPGMDGTPGEKGFQGE 2149
             G+ G +G  G  GP GD G+ G PG PG  G  G   I  GD G PG+ G PG KG  G 
Sbjct:  1339 GMKGPSGVPGSAGPEGDPGLVGPPGPPGLPGPSGQSIIIKGDVGPPGIPGQPGLKGLPGL 1398

Query:  2150 PGDTLAYNLQWTRGRAGEIGPRGDTLAYNL---QWTRGRAGEIGPRGPVGFQGIXXXXXX 2206
             PG          +G  G IGP GD     L       GR G+ G  G  G +G+      
Sbjct:  1399 PGP---------QGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGPPGP 1449

Query:  2207 XXXXX------XXXXSRGFFLTFHSQTDMEPECPRYTSKLWSGYSLLHISGDNKAHTQDL 2260
                            + GF +T HSQT   P+CP  T +++ G+SLL++ G+ +AH QDL
Sbjct:  1450 DGMQGPPGPPGTSSIAHGFLITRHSQTTDAPQCPHGTVQIYEGFSLLYVQGNKRAHGQDL 1509

Query:  2261 GSPGSCLPRFSTMPFLFCSLTQTCDYASRGDNSYWLSSTEPMLKTMEPIPSADLKKYVSR 2320
             G+ GSCL RFSTMPF+FC++   C++ASR D SYWLS+ EPM  +MEP+    ++ ++SR
Sbjct:  1510 GTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLKGQSIQPFISR 1569

Query:  2321 CSVCESTTRAIAIHSQSVTIPSCPGGWEELWVGFSFLMHTDAGSGGGGQSLISPGSCLQD 2380
             C+VCE+    IA+HSQ++ IP CP GW+ LW+G+SF+MHT AG+ G GQ+L SPGSCL++
Sbjct:  1570 CAVCEAPAVVIAVHSQTIQIPHCPHGWDSLWIGYSFMMHTSAGAEGSGQALASPGSCLEE 1629

Query:  2381 FRPTPFIQCHGVGSCNYYSTASSFWLATLDDRDQWRKPRPQTLKANDLKTRISRCAVCLR 2440
             FR  PFI+CHG G+CNYY+ + SFWLAT+D  D + KP+ +TLKA DL+TRISRC VC++
Sbjct:  1630 FRSAPFIECHGRGTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTRISRCQVCMK 1689

Query:  2441 R 2441
             R
Sbjct:  1690 R 1690
GO:0005581 "collagen" evidence=IEA
GO:0005201 "extracellular matrix structural constituent" evidence=IEA
UNIPROTKB|Q28247 COL4A5 "Collagen alpha-5(IV) chain" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1N474 COL4A5 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q0F7 COL4A5 "Collagen alpha-5(IV) chain" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1NDF5 COL4A5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P02462 COL4A1 "Collagen alpha-1(IV) chain" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1565499 Col4a5 "collagen, type IV, alpha 5" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PH05 COL4A5 "Collagen alpha-5(IV) chain" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:88454 Col4a1 "collagen, type IV, alpha 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-2281 col4a5 "collagen, type IV, alpha 5 (Alport syndrome)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P17139CO4A1_CAEELNo assigned EC number0.39250.61110.8908yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query2564
smart00111114 smart00111, C4, C-terminal tandem repeated domain 3e-54
pfam01413110 pfam01413, C4, C-terminal tandem repeated domain i 5e-49
pfam01413110 pfam01413, C4, C-terminal tandem repeated domain i 2e-46
smart00111114 smart00111, C4, C-terminal tandem repeated domain 4e-40
PRK14086617 PRK14086, dnaA, chromosomal replication initiation 9e-04
pfam0139160 pfam01391, Collagen, Collagen triple helix repeat 0.004
>gnl|CDD|128421 smart00111, C4, C-terminal tandem repeated domain in type 4 procollagens Back     alignment and domain information 
 Score =  184 bits (469), Expect = 3e-54
 Identities = 63/115 (54%), Positives = 76/115 (66%), Gaps = 2/115 (1%)

Query: 2328 TRAIAIHSQSVTIPSCPGGWEELWVGFSFLMHTDAGSGGGGQSLISPGSCLQDFRPTPFI 2387
               IA+HSQ+  +P CP GW ELW G+SFLMHT     G GQ L SPGSCL+ FR  PFI
Sbjct: 1    GFVIAVHSQTTNVPQCPAGWVELWTGYSFLMHT-GNGEGHGQDLGSPGSCLERFRTMPFI 59

Query: 2388 QCHGVGSCNYYSTAS-SFWLATLDDRDQWRKPRPQTLKANDLKTRISRCAVCLRR 2441
            +C+G G CNY S    SFWL+T++  DQ+  PRP T KA DL+  ISRC VC + 
Sbjct: 60   ECNGRGVCNYASRNDYSFWLSTIEPSDQFTAPRPMTPKAGDLRPYISRCQVCEKP 114

Duplicated domain in C-terminus of type 4 collagens. Mutations in alpha-5 collagen IV are associated with X-linked Alport syndrome. Length = 114
>gnl|CDD|144854 pfam01413, C4, C-terminal tandem repeated domain in type 4 procollagen Back     alignment and domain information
>gnl|CDD|144854 pfam01413, C4, C-terminal tandem repeated domain in type 4 procollagen Back     alignment and domain information
>gnl|CDD|128421 smart00111, C4, C-terminal tandem repeated domain in type 4 procollagens Back     alignment and domain information
>gnl|CDD|237605 PRK14086, dnaA, chromosomal replication initiation protein; Provisional Back     alignment and domain information
>gnl|CDD|189968 pfam01391, Collagen, Collagen triple helix repeat (20 copies) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 2564
smart00111114 C4 C-terminal tandem repeated domain in type 4 pro 100.0
PF01413114 C4: C-terminal tandem repeated domain in type 4 pr 100.0
PF01413114 C4: C-terminal tandem repeated domain in type 4 pr 100.0
KOG3546|consensus1167 100.0
smart00111114 C4 C-terminal tandem repeated domain in type 4 pro 100.0
KOG3546|consensus1167 100.0
KOG3544|consensus327 99.44
>smart00111 C4 C-terminal tandem repeated domain in type 4 procollagens Back     alignment and domain information 
Probab=100.00  E-value=6.6e-46  Score=382.04  Aligned_cols=109  Identities=52%  Similarity=1.029  Sum_probs=101.4

Q ss_pred             cceEEEecCCCCCCCCCCCCCCCcccccceeeecCCccccCCCCCCCCCCCCCCCCceEeccCCCCcccCCCCCcceeec
Q psy17790       2218 GFFLTFHSQTDMEPECPRYTSKLWSGYSLLHISGDNKAHTQDLGSPGSCLPRFSTMPFLFCSLTQTCDYASRGDNSYWLS 2297 (2564)
Q Consensus      2218 g~~~~~HSQs~~iP~CP~g~~~lw~GyS~l~~~~~~~~~~QdLgs~GSCL~~f~t~pf~~C~~~~~C~y~~~~~~syWLs 2297 (2564)
                      +|||||||||++||+||.+|++||+||||||+++++++|+|||+||||||++||||||||||.+++||||+||+|||||+
T Consensus         1 ~~~~a~HSQt~~iP~CP~g~~~LW~GyS~l~~tg~~~g~gQdL~spGSCL~~F~~~Pfi~C~~~~~C~y~~rn~~SfWLs   80 (114)
T smart00111        1 GFVIAVHSQTTNVPQCPAGWVELWTGYSFLMHTGNGEGHGQDLGSPGSCLERFRTMPFIECNGRGVCNYASRNDYSFWLS   80 (114)
T ss_pred             CceEEEecCCCCCCCCCCCCcccccceeEEEecCCCCccCCCCCCCccchhhhccCCeEEECCCCeecccccCCcceEEe
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccC-----cccccCCCCccccCcccccccccccc
Q psy17790       2298 STEP-----MLKTMEPIPSADLKKYVSRCSVCEST 2327 (2564)
Q Consensus      2298 t~~~-----~~~~~~p~~~~~~~~~iSRC~VC~~~ 2327 (2564)
                      |+++     +++.|+++.. +|++|||||+|||++
T Consensus        81 t~~~~~~f~~p~~~~~~~~-~~~~~ISRC~VC~~~  114 (114)
T smart00111       81 TIEPSDQFTAPRPMTPKAG-DLRPYISRCQVCEKP  114 (114)
T ss_pred             ccCccccccccccccccch-hhhhhccccceeecc
Confidence            9976     3444555555 899999999999984

Duplicated domain in C-terminus of type 4 collagens. Mutations in alpha-5 collagen IV are associated with X-linked Alport syndrome.
>PF01413 C4: C-terminal tandem repeated domain in type 4 procollagen; InterPro: IPR001442 Collagens are major components of the extracellular matrices of all metazoan life and play crucial roles in developmental processes and tissue homeostasis Back     alignment and domain information
>PF01413 C4: C-terminal tandem repeated domain in type 4 procollagen; InterPro: IPR001442 Collagens are major components of the extracellular matrices of all metazoan life and play crucial roles in developmental processes and tissue homeostasis Back     alignment and domain information
>KOG3546|consensus Back     alignment and domain information
>smart00111 C4 C-terminal tandem repeated domain in type 4 procollagens Back     alignment and domain information
>KOG3546|consensus Back     alignment and domain information
>KOG3544|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query2564
1li1_A229 The 1.9-A Crystal Structure Of The Noncollagenous ( 4e-79
1m3d_A229 Structure Of Type Iv Collagen Nc1 Domains Length = 4e-79
1m3d_C227 Structure Of Type Iv Collagen Nc1 Domains Length = 1e-75
1li1_C228 The 1.9-A Crystal Structure Of The Noncollagenous ( 5e-74
3hqv_B1028 Low Resolution, Molecular Envelope Structure Of Typ 2e-04
>pdb|1LI1|A Chain A, The 1.9-A Crystal Structure Of The Noncollagenous (Nc1) Domain Of Human Placenta Collagen Iv Shows Stabilization Via A Novel Type Of Covalent Met-Lys Cross-Link Length = 229 Back     alignment and structure 
Iteration: 1

 Score =  294 bits (753), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 125/224 (55%), Positives = 171/224 (76%)
Query: 2218 GFFLTFHSQTDMEPECPRYTSKLWSGYSLLHISGDNKAHTQDLGSPGSCLPRFSTMPFLF 2277
            GF +T HSQT  +P+CP  T  L+ GYSLL++ G+ +AH QDLG+ GSCL +FSTMPFLF
Sbjct: 5    GFLVTRHSQTIDDPQCPSGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMPFLF 64
Query: 2278 CSLTQTCDYASRGDNSYWLSSTEPMLKTMEPIPSADLKKYVSRCSVCESTTRAIAIHSQS 2337
            C++   C++ASR D SYWLS+ EPM  +M PI   +++ ++SRC+VCE+    +A+HSQ+
Sbjct: 65   CNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGENIRPFISRCAVCEAPAMVMAVHSQT 124
Query: 2338 VTIPSCPGGWEELWVGFSFLMHTDAGSGGGGQSLISPGSCLQDFRPTPFIQCHGVGSCNY 2397
            + IP CP GW  LW+G+SF+MHT AG+ G GQ+L SPGSCL++FR  PFI+CHG G+CNY
Sbjct: 125  IQIPPCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNY 184
Query: 2398 YSTASSFWLATLDDRDQWRKPRPQTLKANDLKTRISRCAVCLRR 2441
            Y+ A SFWLAT++  + ++KP P TLKA +L+T +SRC VC+RR
Sbjct: 185  YANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRR 228
>pdb|1M3D|A Chain A, Structure Of Type Iv Collagen Nc1 Domains Length = 229 Back     alignment and structure
>pdb|1M3D|C Chain C, Structure Of Type Iv Collagen Nc1 Domains Length = 227 Back     alignment and structure
>pdb|1LI1|C Chain C, The 1.9-A Crystal Structure Of The Noncollagenous (Nc1) Domain Of Human Placenta Collagen Iv Shows Stabilization Via A Novel Type Of Covalent Met-Lys Cross-Link Length = 228 Back     alignment and structure
>pdb|3HQV|B Chain B, Low Resolution, Molecular Envelope Structure Of Type I Collagen In Situ Determined By Fiber Diffraction. Single Type I Collagen Molecule, Rigid Body Refinement Length = 1028 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query2564
1t60_C227 Type IV collagen; basement membrane, NC1 domain, s 1e-115
1t60_A229 Type IV collagen; basement membrane, NC1 domain, s 1e-114
1t60_A229 Type IV collagen; basement membrane, NC1 domain, s 4e-29
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 6e-94
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 8e-94
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 3e-93
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 9e-93
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 3e-92
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 8e-92
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 4e-91
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 2e-89
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 4e-89
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 1e-87
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 2e-87
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 2e-86
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 2e-84
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 6e-80
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 7e-79
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 9e-70
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 2e-69
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 1e-68
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 3e-66
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 9e-44
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 8e-34
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 4e-25
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 2e-21
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 4e-93
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 5e-92
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 2e-91
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 5e-89
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 6e-89
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 2e-88
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 5e-85
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 1e-84
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 2e-84
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 2e-84
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 1e-81
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 3e-80
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 2e-77
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 1e-74
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 4e-72
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 6e-71
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 3e-69
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 7e-69
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 3e-66
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 2e-65
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 5e-65
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 8e-61
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 4e-51
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 9e-51
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 2e-33
1wck_A220 BCLA protein; collagen-like protein, bacterial sur 4e-08
1wck_A220 BCLA protein; collagen-like protein, bacterial sur 1e-07
1wck_A220 BCLA protein; collagen-like protein, bacterial sur 2e-07
1wck_A220 BCLA protein; collagen-like protein, bacterial sur 3e-07
1wck_A220 BCLA protein; collagen-like protein, bacterial sur 1e-05
1wck_A220 BCLA protein; collagen-like protein, bacterial sur 1e-05
1wck_A220 BCLA protein; collagen-like protein, bacterial sur 2e-05
1wck_A220 BCLA protein; collagen-like protein, bacterial sur 2e-04
1wck_A220 BCLA protein; collagen-like protein, bacterial sur 3e-04
1wck_A220 BCLA protein; collagen-like protein, bacterial sur 4e-04
4dmu_A87 Collagen III derived triple-helical peptide; dinuc 5e-06
4dmu_A87 Collagen III derived triple-helical peptide; dinuc 9e-06
4dmu_A87 Collagen III derived triple-helical peptide; dinuc 1e-05
4dmu_A87 Collagen III derived triple-helical peptide; dinuc 1e-05
4dmu_A87 Collagen III derived triple-helical peptide; dinuc 2e-05
4dmu_A87 Collagen III derived triple-helical peptide; dinuc 3e-05
4dmu_A87 Collagen III derived triple-helical peptide; dinuc 4e-05
4dmu_A87 Collagen III derived triple-helical peptide; dinuc 4e-05
4dmu_A87 Collagen III derived triple-helical peptide; dinuc 1e-04
4dmu_A87 Collagen III derived triple-helical peptide; dinuc 2e-04
4dmu_A87 Collagen III derived triple-helical peptide; dinuc 2e-04
4dmu_A87 Collagen III derived triple-helical peptide; dinuc 3e-04
4dmu_A87 Collagen III derived triple-helical peptide; dinuc 4e-04
4dmu_A87 Collagen III derived triple-helical peptide; dinuc 5e-04
4dmu_A87 Collagen III derived triple-helical peptide; dinuc 6e-04
4dmu_A87 Collagen III derived triple-helical peptide; dinuc 6e-04
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 2e-05
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 8e-05
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 1e-04
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 2e-04
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 2e-04
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 2e-04
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 4e-04
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 4e-04
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 4e-04
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 5e-04
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 5e-04
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 6e-04
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 6e-04
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 6e-04
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 6e-04
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 6e-04
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 7e-04
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 7e-04
1o91_A178 Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, ext 9e-04
2pne_A81 6.5 kDa glycine-rich antifreeze protein; chemical 3e-04
2pne_A81 6.5 kDa glycine-rich antifreeze protein; chemical 3e-04
2pne_A81 6.5 kDa glycine-rich antifreeze protein; chemical 8e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>1t60_C Type IV collagen; basement membrane, NC1 domain, structural protein; 1.50A {Bos taurus} PDB: 1m3d_C 1t61_C 1li1_C Length = 227 Back     alignment and structure
 Score =  363 bits (934), Expect = e-115
 Identities = 132/226 (58%), Positives = 162/226 (71%), Gaps = 3/226 (1%)

Query: 2216 SRGFFLTFHSQTDMEPECPRYTSKLWSGYSLLHISGDNKAHTQDLGSPGSCLPRFSTMPF 2275
            S G+ L  HSQTD EP CP   +KLWSGYSLL+  G  KAH QDLG  GSCL RFSTMPF
Sbjct: 2    SIGYLLVKHSQTDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPF 61

Query: 2276 LFCSLTQTCDYASRGDNSYWLSSTEPMLKTMEPIPSADLKKYVSRCSVCESTTRAIAIHS 2335
            L+C+    C YASR D SYWLS+T P+   M P+   D++ Y+SRCSVCE+   AIA+HS
Sbjct: 62   LYCNPGDVCYYASRNDKSYWLSTTAPL--PMMPVAEEDIRPYISRCSVCEAPAVAIAVHS 119

Query: 2336 QSVTIPSCPGGWEELWVGFSFLMHTDAGSGGGGQSLISPGSCLQDFRPTPFIQCHGV-GS 2394
            Q V+IP CP GW  LW+G+SFLMHT AG  GGGQSL+SPGSCL+DFR TPFI+C+G  G+
Sbjct: 120  QDVSIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGT 179

Query: 2395 CNYYSTASSFWLATLDDRDQWRKPRPQTLKANDLKTRISRCAVCLR 2440
            C+YY+   SFWL T+ ++     P   TLKA  ++T ISRC VC++
Sbjct: 180  CHYYANKYSFWLTTIPEQSFQGTPSADTLKAGLIRTHISRCQVCMK 225
>1t60_A Type IV collagen; basement membrane, NC1 domain, structural protein; 1.50A {Bos taurus} SCOP: d.169.1.6 d.169.1.6 PDB: 1m3d_A 1t61_A 1li1_A Length = 229 Back     alignment and structure
>1t60_A Type IV collagen; basement membrane, NC1 domain, structural protein; 1.50A {Bos taurus} SCOP: d.169.1.6 d.169.1.6 PDB: 1m3d_A 1t61_A 1li1_A Length = 229 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_A 3hqv_A 3hr2_A Length = 1054 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} SCOP: i.25.1.1 PDB: 1ygv_B 3hqv_B 3hr2_B Length = 1026 Back     alignment and structure
>1wck_A BCLA protein; collagen-like protein, bacterial surface antigen, jelly- roll topology, structural protein; 1.36A {Bacillus anthracis} Length = 220 Back     alignment and structure
>1wck_A BCLA protein; collagen-like protein, bacterial surface antigen, jelly- roll topology, structural protein; 1.36A {Bacillus anthracis} Length = 220 Back     alignment and structure
>1wck_A BCLA protein; collagen-like protein, bacterial surface antigen, jelly- roll topology, structural protein; 1.36A {Bacillus anthracis} Length = 220 Back     alignment and structure
>1wck_A BCLA protein; collagen-like protein, bacterial surface antigen, jelly- roll topology, structural protein; 1.36A {Bacillus anthracis} Length = 220 Back     alignment and structure
>1wck_A BCLA protein; collagen-like protein, bacterial surface antigen, jelly- roll topology, structural protein; 1.36A {Bacillus anthracis} Length = 220 Back     alignment and structure
>1wck_A BCLA protein; collagen-like protein, bacterial surface antigen, jelly- roll topology, structural protein; 1.36A {Bacillus anthracis} Length = 220 Back     alignment and structure
>1wck_A BCLA protein; collagen-like protein, bacterial surface antigen, jelly- roll topology, structural protein; 1.36A {Bacillus anthracis} Length = 220 Back     alignment and structure
>1wck_A BCLA protein; collagen-like protein, bacterial surface antigen, jelly- roll topology, structural protein; 1.36A {Bacillus anthracis} Length = 220 Back     alignment and structure
>1wck_A BCLA protein; collagen-like protein, bacterial surface antigen, jelly- roll topology, structural protein; 1.36A {Bacillus anthracis} Length = 220 Back     alignment and structure
>1wck_A BCLA protein; collagen-like protein, bacterial surface antigen, jelly- roll topology, structural protein; 1.36A {Bacillus anthracis} Length = 220 Back     alignment and structure
>4dmu_A Collagen III derived triple-helical peptide; dinucleotide binding fold, collagen binding, platelet activa hemostasis, plasma, structural protein-protein binding COMP; 2.80A {Synthetic} Length = 87 Back     alignment and structure
>4dmu_A Collagen III derived triple-helical peptide; dinucleotide binding fold, collagen binding, platelet activa hemostasis, plasma, structural protein-protein binding COMP; 2.80A {Synthetic} Length = 87 Back     alignment and structure
>4dmu_A Collagen III derived triple-helical peptide; dinucleotide binding fold, collagen binding, platelet activa hemostasis, plasma, structural protein-protein binding COMP; 2.80A {Synthetic} Length = 87 Back     alignment and structure
>4dmu_A Collagen III derived triple-helical peptide; dinucleotide binding fold, collagen binding, platelet activa hemostasis, plasma, structural protein-protein binding COMP; 2.80A {Synthetic} Length = 87 Back     alignment and structure
>4dmu_A Collagen III derived triple-helical peptide; dinucleotide binding fold, collagen binding, platelet activa hemostasis, plasma, structural protein-protein binding COMP; 2.80A {Synthetic} Length = 87 Back     alignment and structure
>4dmu_A Collagen III derived triple-helical peptide; dinucleotide binding fold, collagen binding, platelet activa hemostasis, plasma, structural protein-protein binding COMP; 2.80A {Synthetic} Length = 87 Back     alignment and structure
>4dmu_A Collagen III derived triple-helical peptide; dinucleotide binding fold, collagen binding, platelet activa hemostasis, plasma, structural protein-protein binding COMP; 2.80A {Synthetic} Length = 87 Back     alignment and structure
>4dmu_A Collagen III derived triple-helical peptide; dinucleotide binding fold, collagen binding, platelet activa hemostasis, plasma, structural protein-protein binding COMP; 2.80A {Synthetic} Length = 87 Back     alignment and structure
>4dmu_A Collagen III derived triple-helical peptide; dinucleotide binding fold, collagen binding, platelet activa hemostasis, plasma, structural protein-protein binding COMP; 2.80A {Synthetic} Length = 87 Back     alignment and structure
>4dmu_A Collagen III derived triple-helical peptide; dinucleotide binding fold, collagen binding, platelet activa hemostasis, plasma, structural protein-protein binding COMP; 2.80A {Synthetic} Length = 87 Back     alignment and structure
>4dmu_A Collagen III derived triple-helical peptide; dinucleotide binding fold, collagen binding, platelet activa hemostasis, plasma, structural protein-protein binding COMP; 2.80A {Synthetic} Length = 87 Back     alignment and structure
>4dmu_A Collagen III derived triple-helical peptide; dinucleotide binding fold, collagen binding, platelet activa hemostasis, plasma, structural protein-protein binding COMP; 2.80A {Synthetic} Length = 87 Back     alignment and structure
>4dmu_A Collagen III derived triple-helical peptide; dinucleotide binding fold, collagen binding, platelet activa hemostasis, plasma, structural protein-protein binding COMP; 2.80A {Synthetic} Length = 87 Back     alignment and structure
>4dmu_A Collagen III derived triple-helical peptide; dinucleotide binding fold, collagen binding, platelet activa hemostasis, plasma, structural protein-protein binding COMP; 2.80A {Synthetic} Length = 87 Back     alignment and structure
>4dmu_A Collagen III derived triple-helical peptide; dinucleotide binding fold, collagen binding, platelet activa hemostasis, plasma, structural protein-protein binding COMP; 2.80A {Synthetic} Length = 87 Back     alignment and structure
>4dmu_A Collagen III derived triple-helical peptide; dinucleotide binding fold, collagen binding, platelet activa hemostasis, plasma, structural protein-protein binding COMP; 2.80A {Synthetic} Length = 87 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>1o91_A Collagen alpha 1(VIII) chain; C1Q_LIKE_domain, extracellular matrix, adhesion, connective tissue, repeat; HET: CPS; 1.9A {Mus musculus} SCOP: b.22.1.1 Length = 178 Back     alignment and structure
>2pne_A 6.5 kDa glycine-rich antifreeze protein; chemical protein synthesis, native chemical ligation; 0.98A {Synthetic} PDB: 3boi_A 3bog_A* 3bog_C* Length = 81 Back     alignment and structure
>2pne_A 6.5 kDa glycine-rich antifreeze protein; chemical protein synthesis, native chemical ligation; 0.98A {Synthetic} PDB: 3boi_A 3bog_A* 3bog_C* Length = 81 Back     alignment and structure
>2pne_A 6.5 kDa glycine-rich antifreeze protein; chemical protein synthesis, native chemical ligation; 0.98A {Synthetic} PDB: 3boi_A 3bog_A* 3bog_C* Length = 81 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query2564
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 100.0
1y0f_A1054 Collagen I alpha 1; native, in SITU, triple-helix, 100.0
1t60_A229 Type IV collagen; basement membrane, NC1 domain, s 100.0
3hqv_A1056 Collagen alpha-1(I) chain; native, in SITU, molecu 100.0
1t60_C227 Type IV collagen; basement membrane, NC1 domain, s 100.0
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 100.0
1y0f_B1026 Collagen I alpha 2; native, in SITU, triple-helix, 100.0
1t60_A229 Type IV collagen; basement membrane, NC1 domain, s 100.0
1t60_C227 Type IV collagen; basement membrane, NC1 domain, s 100.0
4gyx_A31 Type III collagen fragment in A HOST peptide STAB 88.09
3gxe_F23 Collagen alpha-1(I) chain; protein-peptide complex 83.78
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} PDB: 1ygv_A 3hqv_A 3hr2_A Back     alignment and structure
Probab=100.00  E-value=3.7e-87  Score=909.90  Aligned_cols=13  Identities=62%  Similarity=1.370  Sum_probs=4.8

Q ss_pred             CCCCCCCCCCCCC
Q psy17790       2198 QGIPGAPGLPAPP 2210 (2564)
Q Consensus      2198 ~G~~G~~G~~g~~ 2210 (2564)
                      ++.+++++.++++
T Consensus      1018 ~G~pGppGppGpp 1030 (1054)
T 1y0f_A         1018 PGPPGPPGPPGPP 1030 (1054)
T ss_pred             CCCCCCCCCCCCC
Confidence            3333333333333
>1y0f_A Collagen I alpha 1; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} PDB: 1ygv_A 3hqv_A 3hr2_A Back     alignment and structure
>1t60_A Type IV collagen; basement membrane, NC1 domain, structural protein; 1.50A {Bos taurus} SCOP: d.169.1.6 d.169.1.6 PDB: 1m3d_A 1t61_A 1li1_A Back     alignment and structure
>3hqv_A Collagen alpha-1(I) chain; native, in SITU, molecular envelope, triple-helical, supermolecular, supramolecular, packing structure; 5.16A {Rattus norvegicus} PDB: 3hr2_A Back     alignment and structure
>1t60_C Type IV collagen; basement membrane, NC1 domain, structural protein; 1.50A {Bos taurus} PDB: 1m3d_C 1t61_C 1li1_C Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} PDB: 1ygv_B 3hqv_B 3hr2_B Back     alignment and structure
>1y0f_B Collagen I alpha 2; native, in SITU, triple-helix, supermolecular, packing structure; 5.16A {Rattus norvegicus} PDB: 1ygv_B 3hqv_B 3hr2_B Back     alignment and structure
>1t60_A Type IV collagen; basement membrane, NC1 domain, structural protein; 1.50A {Bos taurus} SCOP: d.169.1.6 d.169.1.6 PDB: 1m3d_A 1t61_A 1li1_A Back     alignment and structure
>1t60_C Type IV collagen; basement membrane, NC1 domain, structural protein; 1.50A {Bos taurus} PDB: 1m3d_C 1t61_C 1li1_C Back     alignment and structure
>4gyx_A Type III collagen fragment in A HOST peptide STAB the cysteine knot; collagen triple helix, type III collagen cysteine knot, BLOO clotting; 1.49A {Homo sapiens} Back     alignment and structure
>3gxe_F Collagen alpha-1(I) chain; protein-peptide complex, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3gxe_E* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 2564
d1t61a2111 d.169.1.6 (A:115-225) Noncollagenous (NC1) domain 2e-56
d1t61a2111 d.169.1.6 (A:115-225) Noncollagenous (NC1) domain 2e-42
d1t61c2111 d.169.1.6 (C:115-225) Noncollagenous (NC1) domain 3e-54
d1t61c2111 d.169.1.6 (C:115-225) Noncollagenous (NC1) domain 2e-40
d1t61a1109 d.169.1.6 (A:6-114) Noncollagenous (NC1) domain of 5e-48
d1t61a1109 d.169.1.6 (A:6-114) Noncollagenous (NC1) domain of 2e-43
d1t61c1109 d.169.1.6 (C:6-114) Noncollagenous (NC1) domain of 1e-46
d1t61c1109 d.169.1.6 (C:6-114) Noncollagenous (NC1) domain of 2e-42
>d1t61a2 d.169.1.6 (A:115-225) Noncollagenous (NC1) domain of collagen IV {Cow (Bos taurus) [TaxId: 9913]} Length = 111 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: Noncollagenous (NC1) domain of collagen IV
domain: Noncollagenous (NC1) domain of collagen IV
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  188 bits (479), Expect = 2e-56
 Identities = 64/109 (58%), Positives = 86/109 (78%)

Query: 2330 AIAIHSQSVTIPSCPGGWEELWVGFSFLMHTDAGSGGGGQSLISPGSCLQDFRPTPFIQC 2389
             +A+HSQ++ IP CP GW  LW+G+SF+MHT AG+ G GQ+L SPGSCL++FR  PFI+C
Sbjct: 3    VMAVHSQTIQIPQCPTGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIEC 62

Query: 2390 HGVGSCNYYSTASSFWLATLDDRDQWRKPRPQTLKANDLKTRISRCAVC 2438
            HG G+CNYY+ A SFWLAT++  + ++KP P TLKA +L+T +SRC VC
Sbjct: 63   HGRGTCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVC 111
>d1t61a2 d.169.1.6 (A:115-225) Noncollagenous (NC1) domain of collagen IV {Cow (Bos taurus) [TaxId: 9913]} Length = 111 Back     information, alignment and structure
>d1t61c2 d.169.1.6 (C:115-225) Noncollagenous (NC1) domain of collagen IV {Cow (Bos taurus) [TaxId: 9913]} Length = 111 Back     information, alignment and structure
>d1t61c2 d.169.1.6 (C:115-225) Noncollagenous (NC1) domain of collagen IV {Cow (Bos taurus) [TaxId: 9913]} Length = 111 Back     information, alignment and structure
>d1t61a1 d.169.1.6 (A:6-114) Noncollagenous (NC1) domain of collagen IV {Cow (Bos taurus) [TaxId: 9913]} Length = 109 Back     information, alignment and structure
>d1t61a1 d.169.1.6 (A:6-114) Noncollagenous (NC1) domain of collagen IV {Cow (Bos taurus) [TaxId: 9913]} Length = 109 Back     information, alignment and structure
>d1t61c1 d.169.1.6 (C:6-114) Noncollagenous (NC1) domain of collagen IV {Cow (Bos taurus) [TaxId: 9913]} Length = 109 Back     information, alignment and structure
>d1t61c1 d.169.1.6 (C:6-114) Noncollagenous (NC1) domain of collagen IV {Cow (Bos taurus) [TaxId: 9913]} Length = 109 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query2564
d1t61a1109 Noncollagenous (NC1) domain of collagen IV {Cow (B 100.0
d1t61c1109 Noncollagenous (NC1) domain of collagen IV {Cow (B 100.0
d1t61c2111 Noncollagenous (NC1) domain of collagen IV {Cow (B 100.0
d1t61a2111 Noncollagenous (NC1) domain of collagen IV {Cow (B 100.0
d1t61a2111 Noncollagenous (NC1) domain of collagen IV {Cow (B 100.0
d1t61c2111 Noncollagenous (NC1) domain of collagen IV {Cow (B 100.0
d1t61a1109 Noncollagenous (NC1) domain of collagen IV {Cow (B 100.0
d1t61c1109 Noncollagenous (NC1) domain of collagen IV {Cow (B 100.0
>d1t61a1 d.169.1.6 (A:6-114) Noncollagenous (NC1) domain of collagen IV {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: C-type lectin-like
superfamily: C-type lectin-like
family: Noncollagenous (NC1) domain of collagen IV
domain: Noncollagenous (NC1) domain of collagen IV
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.4e-50  Score=405.52  Aligned_cols=109  Identities=53%  Similarity=1.076  Sum_probs=107.6

Q ss_pred             ceEEEecCCCCCCCCCCCCCCCcccccceeeecCCccccCCCCCCCCCCCCCCCCceEeccCCCCcccCCCCCcceeecc
Q psy17790       2219 FFLTFHSQTDMEPECPRYTSKLWSGYSLLHISGDNKAHTQDLGSPGSCLPRFSTMPFLFCSLTQTCDYASRGDNSYWLSS 2298 (2564)
Q Consensus      2219 ~~~~~HSQs~~iP~CP~g~~~lw~GyS~l~~~~~~~~~~QdLgs~GSCL~~f~t~pf~~C~~~~~C~y~~~~~~syWLst 2298 (2564)
                      |||||||||++||+||.+|++||+||||||+++++++|+|||+||||||++||+|||||||.+++||||+||||||||||
T Consensus         1 fl~a~HSQt~~iP~CP~g~~~LW~GYSfl~~~g~~~~~GQdLgspGSCL~~F~~~PFi~C~~~~~C~~~~~n~~S~WLst   80 (109)
T d1t61a1           1 FLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMPFLFCNINNVCNFASRNDYSYWLST   80 (109)
T ss_dssp             EEEEEECSSSSCCCCCTTCEEEEEEEEEEEEEETTEEEECCTTSGGGEESSCCSCCEEEECTTSEEEESCSSCEEEEEBC
T ss_pred             CEEEEecCCCCCCCCCCCChhhcceeeeEEEccCCcccCcccCCCccchhhccCCCcEEECCCCccccccCCCceEEeec
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCcccccCCCCccccCcccccccccccc
Q psy17790       2299 TEPMLKTMEPIPSADLKKYVSRCSVCEST 2327 (2564)
Q Consensus      2299 ~~~~~~~~~p~~~~~~~~~iSRC~VC~~~ 2327 (2564)
                      +++++|+|+||...+|++|||||+|||++
T Consensus        81 ~~~~~~~~~p~~~~~~~~~ISRC~VCeap  109 (109)
T d1t61a1          81 PEPMPMSMAPITGENIRPFISRCAVCEAP  109 (109)
T ss_dssp             SCCCCTTCCCEEGGGGGGGBCEEEEEEES
T ss_pred             cCcCCccccccchhhhhccccccccccCC
Confidence            99999999999999999999999999986
>d1t61c1 d.169.1.6 (C:6-114) Noncollagenous (NC1) domain of collagen IV {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1t61c2 d.169.1.6 (C:115-225) Noncollagenous (NC1) domain of collagen IV {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1t61a2 d.169.1.6 (A:115-225) Noncollagenous (NC1) domain of collagen IV {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1t61a2 d.169.1.6 (A:115-225) Noncollagenous (NC1) domain of collagen IV {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1t61c2 d.169.1.6 (C:115-225) Noncollagenous (NC1) domain of collagen IV {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1t61a1 d.169.1.6 (A:6-114) Noncollagenous (NC1) domain of collagen IV {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1t61c1 d.169.1.6 (C:6-114) Noncollagenous (NC1) domain of collagen IV {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure