Psyllid ID: psy17851

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60
Protein Sequence
MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMCAY
Secondary Structure (PSIPRED)
ccccccccEEEEccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccHHcccccEEEccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
mtkaflkprikvgrdfvtkSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMCAY
Flexible Loop (DISEMBL)
mtkaflkprikvgrdfvtksqtkeqVEFAVEAISKACYERMFRWLVNRINRSLDTIMCAY
Low Complexity Region (SEG)
MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMCAY
Disordered region (IsUnstruct)
*********IKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMC**
Disordered Region (DISOPRED)
MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRS*D******
Disordered Region (DISEMBL)
MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMCAY
Disordered Region (DISPRO)
MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMCAY
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMCAY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	60	2.2.26 [Sep-21-2011]
Q99323	2057	Myosin heavy chain, non-m	yes	N/A	0.9	0.026	0.907	3e-24
Q62812	1961	Myosin-9 OS=Rattus norveg	yes	N/A	0.883	0.027	0.698	3e-17
P35579	1960	Myosin-9 OS=Homo sapiens	yes	N/A	0.883	0.027	0.698	3e-17
Q8VDD5	1960	Myosin-9 OS=Mus musculus	yes	N/A	0.883	0.027	0.698	3e-17
Q258K2	1960	Myosin-9 OS=Canis familia	yes	N/A	0.883	0.027	0.698	3e-17
P14105	1959	Myosin-9 OS=Gallus gallus	yes	N/A	0.883	0.027	0.679	8e-17
O08638	1972	Myosin-11 OS=Mus musculus	no	N/A	0.883	0.026	0.641	2e-16
P35748	1972	Myosin-11 OS=Oryctolagus	yes	N/A	0.883	0.026	0.641	3e-16
Q63862	1327	Myosin-11 (Fragments) OS=	no	N/A	0.883	0.039	0.641	3e-16
P35749	1972	Myosin-11 OS=Homo sapiens	no	N/A	0.883	0.026	0.641	4e-16

>sp|Q99323|MYSN_DROME Myosin heavy chain, non-muscle OS=Drosophila melanogaster GN=zip PE=1 SV=2

 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 49/54 (90%), Positives = 53/54 (98%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           MT+AFL PRIKVGRDFVTK+QTKEQVEFAVEAI+KACYERMF+WLVNRINRSLD
Sbjct: 484 MTRAFLTPRIKVGRDFVTKAQTKEQVEFAVEAIAKACYERMFKWLVNRINRSLD 537

Nonmuscle myosin appears to be responsible for cellularization. Required for morphogenesis and cytokinesis.
Drosophila melanogaster (taxid: 7227)

>sp|Q62812|MYH9_RAT Myosin-9 OS=Rattus norvegicus GN=Myh9 PE=1 SV=3

 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 37/53 (69%), Positives = 46/53 (86%)

Query: 2   TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           T+  L PRIKVGRD+V K+QTKEQ +FA+EA++KA YERMFRWLV RIN++LD
Sbjct: 386 TRGILTPRIKVGRDYVQKAQTKEQADFAIEALAKATYERMFRWLVLRINKALD 438

Cellular myosin that appears to play a role in cytokinesis, cell shape, and specialized functions such as secretion and capping.

Rattus norvegicus (taxid: 10116)

>sp|P35579|MYH9_HUMAN Myosin-9 OS=Homo sapiens GN=MYH9 PE=1 SV=4

 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 37/53 (69%), Positives = 46/53 (86%)

Query: 2   TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           T+  L PRIKVGRD+V K+QTKEQ +FA+EA++KA YERMFRWLV RIN++LD
Sbjct: 386 TRGILTPRIKVGRDYVQKAQTKEQADFAIEALAKATYERMFRWLVLRINKALD 438

Cellular myosin that appears to play a role in cytokinesis, cell shape, and specialized functions such as secretion and capping.

Homo sapiens (taxid: 9606)

>sp|Q8VDD5|MYH9_MOUSE Myosin-9 OS=Mus musculus GN=Myh9 PE=1 SV=4

 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 37/53 (69%), Positives = 46/53 (86%)

Query: 2   TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           T+  L PRIKVGRD+V K+QTKEQ +FA+EA++KA YERMFRWLV RIN++LD
Sbjct: 386 TRGILTPRIKVGRDYVQKAQTKEQADFAIEALAKATYERMFRWLVLRINKALD 438

Cellular myosin that appears to play a role in cytokinesis, cell shape, and specialized functions such as secretion and capping. Plays a role in cell spreading and cell migration.

Mus musculus (taxid: 10090)

>sp|Q258K2|MYH9_CANFA Myosin-9 OS=Canis familiaris GN=MYH9 PE=2 SV=1

 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 37/53 (69%), Positives = 46/53 (86%)

Query: 2   TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           T+  L PRIKVGRD+V K+QTKEQ +FA+EA++KA YERMFRWLV RIN++LD
Sbjct: 386 TRGILTPRIKVGRDYVQKAQTKEQADFAIEALAKATYERMFRWLVLRINKALD 438

Cellular myosin that appears to play a role in cytokinesis, cell shape, and specialized functions such as secretion and capping.

Canis familiaris (taxid: 9615)

>sp|P14105|MYH9_CHICK Myosin-9 OS=Gallus gallus GN=MYH9 PE=2 SV=1

 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 46/53 (86%)

Query: 2   TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           T+  L PRIKVGRD+V K+QTKEQ +FA+EA++KA YE+MFRWLV RIN++LD
Sbjct: 386 TRGILTPRIKVGRDYVQKAQTKEQADFAIEALAKATYEQMFRWLVMRINKALD 438

Cellular myosin that appears to play a role in cytokinesis, cell shape, and specialized functions such as secretion and capping.

Gallus gallus (taxid: 9031)

>sp|O08638|MYH11_MOUSE Myosin-11 OS=Mus musculus GN=Myh11 PE=1 SV=1

 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 47/53 (88%)

Query: 2   TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           T+A L PRIKVGRD V K+QTKEQ +FA+EA++KA YER+FRW+++R+N++LD
Sbjct: 393 TRAILTPRIKVGRDVVQKAQTKEQADFAIEALAKATYERLFRWILSRVNKALD 445

Muscle contraction.

Mus musculus (taxid: 10090)

>sp|P35748|MYH11_RABIT Myosin-11 OS=Oryctolagus cuniculus GN=MYH11 PE=2 SV=2

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 47/53 (88%)

Query: 2   TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           T++ L PRIKVGRD V K+QTKEQ +FAVEA++KA YER+FRW+++R+N++LD
Sbjct: 393 TRSILTPRIKVGRDVVQKAQTKEQADFAVEALAKATYERLFRWILSRVNKALD 445

Muscle contraction.

Oryctolagus cuniculus (taxid: 9986)

>sp|Q63862|MYH11_RAT Myosin-11 (Fragments) OS=Rattus norvegicus GN=Myh11 PE=2 SV=3

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 47/53 (88%)

Query: 2   TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           T+A L PRIKVGRD V K+QTKEQ +FA+EA++KA YER+FRW+++R+N++LD
Sbjct: 256 TRAILTPRIKVGRDVVQKAQTKEQADFAIEALAKATYERLFRWILSRVNKALD 308

Muscle contraction.

Rattus norvegicus (taxid: 10116)

>sp|P35749|MYH11_HUMAN Myosin-11 OS=Homo sapiens GN=MYH11 PE=1 SV=3

 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 34/53 (64%), Positives = 46/53 (86%)

Query: 2   TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           T++ L PRIKVGRD V K+QTKEQ +FAVEA++KA YER+FRW++ R+N++LD
Sbjct: 393 TRSILTPRIKVGRDVVQKAQTKEQADFAVEALAKATYERLFRWILTRVNKALD 445

Muscle contraction.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	60
322789355	1714	hypothetical protein SINV_10357 [Solenop	0.9	0.031	0.981	1e-24
307214547	1830	Myosin heavy chain, non-muscle [Harpegna	0.9	0.029	0.981	1e-24
242014184	1968	myosin-9, putative [Pediculus humanus co	0.9	0.027	0.981	1e-24
345486457	1882	PREDICTED: LOW QUALITY PROTEIN: myosin h	0.9	0.028	0.981	1e-24
383850896	1968	PREDICTED: myosin heavy chain, non-muscl	0.9	0.027	0.981	2e-24
340711723	1979	PREDICTED: myosin heavy chain, non-muscl	0.9	0.027	0.981	2e-24
380023226	1967	PREDICTED: LOW QUALITY PROTEIN: myosin h	0.9	0.027	0.981	2e-24
328790487	1967	PREDICTED: myosin heavy chain, non-muscl	0.9	0.027	0.981	2e-24
340711721	1969	PREDICTED: myosin heavy chain, non-muscl	0.9	0.027	0.981	2e-24
350412852	1967	PREDICTED: myosin heavy chain, non-muscl	0.9	0.027	0.981	2e-24

>gi|322789355|gb|EFZ14667.1| hypothetical protein SINV_10357 [Solenopsis invicta]

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/54 (98%), Positives = 54/54 (100%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           MTKAFLKPRIKVGRDFVTK+QTKEQVEFAVEAISKACYERMFRWLVNRINRSLD
Sbjct: 169 MTKAFLKPRIKVGRDFVTKAQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 222

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307214547|gb|EFN89532.1| Myosin heavy chain, non-muscle [Harpegnathos saltator]

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/54 (98%), Positives = 54/54 (100%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           MTKAFLKPRIKVGRDFVTK+QTKEQVEFAVEAISKACYERMFRWLVNRINRSLD
Sbjct: 258 MTKAFLKPRIKVGRDFVTKAQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 311

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242014184|ref|XP_002427775.1| myosin-9, putative [Pediculus humanus corporis] gi|212512229|gb|EEB15037.1| myosin-9, putative [Pediculus humanus corporis]

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/54 (98%), Positives = 54/54 (100%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           MTKAFLKPRIKVGRDFVTK+QTKEQVEFAVEAISKACYERMFRWLVNRINRSLD
Sbjct: 396 MTKAFLKPRIKVGRDFVTKAQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 449

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345486457|ref|XP_003425478.1| PREDICTED: LOW QUALITY PROTEIN: myosin heavy chain, non-muscle [Nasonia vitripennis]

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/54 (98%), Positives = 54/54 (100%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           MTKAFLKPRIKVGRDFVTK+QTKEQVEFAVEAISKACYERMFRWLVNRINRSLD
Sbjct: 284 MTKAFLKPRIKVGRDFVTKAQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 337

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383850896|ref|XP_003701010.1| PREDICTED: myosin heavy chain, non-muscle-like [Megachile rotundata]

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/54 (98%), Positives = 54/54 (100%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           MTKAFLKPRIKVGRDFVTK+QTKEQVEFAVEAISKACYERMFRWLVNRINRSLD
Sbjct: 400 MTKAFLKPRIKVGRDFVTKAQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 453

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340711723|ref|XP_003394420.1| PREDICTED: myosin heavy chain, non-muscle-like isoform 2 [Bombus terrestris]

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/54 (98%), Positives = 54/54 (100%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           MTKAFLKPRIKVGRDFVTK+QTKEQVEFAVEAISKACYERMFRWLVNRINRSLD
Sbjct: 410 MTKAFLKPRIKVGRDFVTKAQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 463

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380023226|ref|XP_003695426.1| PREDICTED: LOW QUALITY PROTEIN: myosin heavy chain, non-muscle-like [Apis florea]

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/54 (98%), Positives = 54/54 (100%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           MTKAFLKPRIKVGRDFVTK+QTKEQVEFAVEAISKACYERMFRWLVNRINRSLD
Sbjct: 400 MTKAFLKPRIKVGRDFVTKAQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 453

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328790487|ref|XP_623323.3| PREDICTED: myosin heavy chain, non-muscle [Apis mellifera]

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/54 (98%), Positives = 54/54 (100%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           MTKAFLKPRIKVGRDFVTK+QTKEQVEFAVEAISKACYERMFRWLVNRINRSLD
Sbjct: 400 MTKAFLKPRIKVGRDFVTKAQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 453

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340711721|ref|XP_003394419.1| PREDICTED: myosin heavy chain, non-muscle-like isoform 1 [Bombus terrestris]

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/54 (98%), Positives = 54/54 (100%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           MTKAFLKPRIKVGRDFVTK+QTKEQVEFAVEAISKACYERMFRWLVNRINRSLD
Sbjct: 400 MTKAFLKPRIKVGRDFVTKAQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 453

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350412852|ref|XP_003489788.1| PREDICTED: myosin heavy chain, non-muscle-like [Bombus impatiens]

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/54 (98%), Positives = 54/54 (100%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           MTKAFLKPRIKVGRDFVTK+QTKEQVEFAVEAISKACYERMFRWLVNRINRSLD
Sbjct: 400 MTKAFLKPRIKVGRDFVTKAQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 453

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	60
WB|WBGene00003776	1963	nmy-1 [Caenorhabditis elegans	0.9	0.027	0.722	2.1e-15
ZFIN|ZDB-GENE-030616-162	1992	myh10 "myosin, heavy chain 10,	0.883	0.026	0.716	3.4e-15
ZFIN|ZDB-GENE-091112-18	1686	si:ch211-150d5.2 "si:ch211-150	0.883	0.031	0.735	3.6e-15
UNIPROTKB|F1P312	1861	MYH10 "Uncharacterized protein	0.883	0.028	0.716	4.1e-15
UNIPROTKB|F1SSA6	1864	LOC396903 "Uncharacterized pro	0.883	0.028	0.716	4.1e-15
UNIPROTKB|F1P313	1871	MYH10 "Uncharacterized protein	0.883	0.028	0.716	4.1e-15
UNIPROTKB|F1P314	1882	MYH10 "Uncharacterized protein	0.883	0.028	0.716	4.1e-15
UNIPROTKB|F1NGG0	1892	MYH10 "Uncharacterized protein	0.883	0.028	0.716	4.1e-15
ZFIN|ZDB-GENE-030131-5870	1964	myh9a "myosin, heavy polypepti	0.883	0.026	0.735	4.3e-15
UNIPROTKB|Q27991	1976	MYH10 "Myosin-10" [Bos taurus	0.883	0.026	0.716	4.4e-15

WB|WBGene00003776 nmy-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 210 (79.0 bits), Expect = 2.1e-15, P = 2.1e-15
 Identities = 39/54 (72%), Positives = 48/54 (88%)

Query:     1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
             + KAFL+PRIKVGR+FV K+Q +EQ EFAVEAI+KA YER+F+WLV RIN+SLD
Sbjct:   399 LQKAFLRPRIKVGREFVNKAQNQEQAEFAVEAIAKASYERLFKWLVTRINKSLD 452

GO:0003774 "motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0010171 "body morphogenesis" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040002 "collagen and cuticulin-based cuticle development" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IGI;IMP

GO:0016476 "regulation of embryonic cell shape" evidence=IGI;IMP

GO:0008104 "protein localization" evidence=IMP

GO:0043292 "contractile fiber" evidence=IDA

GO:0005913 "cell-cell adherens junction" evidence=IDA

ZFIN|ZDB-GENE-030616-162 myh10 "myosin, heavy chain 10, non-muscle" [Danio rerio (taxid:7955)]

 Score = 208 (78.3 bits), Expect = 3.4e-15, P = 3.4e-15
 Identities = 38/53 (71%), Positives = 48/53 (90%)

Query:     2 TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
             T+A L PRIKVGRD+V K+QTKEQ +FAVEA++KA YER+FRWLV+RIN++LD
Sbjct:   412 TRAILSPRIKVGRDYVQKAQTKEQADFAVEALAKATYERLFRWLVHRINKALD 464

GO:0016459 "myosin complex" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0051015 "actin filament binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

ZFIN|ZDB-GENE-091112-18 si:ch211-150d5.2 "si:ch211-150d5.2" [Danio rerio (taxid:7955)]

 Score = 207 (77.9 bits), Expect = 3.6e-15, P = 3.6e-15
 Identities = 39/53 (73%), Positives = 47/53 (88%)

Query:     2 TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
             T+A L PRIKVGRD+V K+QT+EQ EFAVEA++KA YERMFRWLV RIN++LD
Sbjct:   387 TRAILSPRIKVGRDYVQKAQTQEQAEFAVEALAKATYERMFRWLVMRINKALD 439

GO:0016459 "myosin complex" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0051015 "actin filament binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1P312 MYH10 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 207 (77.9 bits), Expect = 4.1e-15, P = 4.1e-15
 Identities = 38/53 (71%), Positives = 48/53 (90%)

Query:     2 TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
             T+A L PRIKVGRD+V K+QTKEQ +FAVEA++KA YER+FRWLV+RIN++LD
Sbjct:   278 TRAILTPRIKVGRDYVQKAQTKEQADFAVEALAKATYERLFRWLVHRINKALD 330

GO:0003774 "motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

UNIPROTKB|F1SSA6 LOC396903 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 207 (77.9 bits), Expect = 4.1e-15, P = 4.1e-15
 Identities = 38/53 (71%), Positives = 48/53 (90%)

Query:     2 TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
             T+A L PRIKVGRD+V K+QTKEQ +FAVEA++KA YER+FRWLV+RIN++LD
Sbjct:   278 TRAILTPRIKVGRDYVQKAQTKEQADFAVEALAKATYERLFRWLVHRINKALD 330

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

UNIPROTKB|F1P313 MYH10 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 207 (77.9 bits), Expect = 4.1e-15, P = 4.1e-15
 Identities = 38/53 (71%), Positives = 48/53 (90%)

Query:     2 TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
             T+A L PRIKVGRD+V K+QTKEQ +FAVEA++KA YER+FRWLV+RIN++LD
Sbjct:   288 TRAILTPRIKVGRDYVQKAQTKEQADFAVEALAKATYERLFRWLVHRINKALD 340

GO:0003774 "motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

UNIPROTKB|F1P314 MYH10 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 207 (77.9 bits), Expect = 4.1e-15, P = 4.1e-15
 Identities = 38/53 (71%), Positives = 48/53 (90%)

Query:     2 TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
             T+A L PRIKVGRD+V K+QTKEQ +FAVEA++KA YER+FRWLV+RIN++LD
Sbjct:   278 TRAILTPRIKVGRDYVQKAQTKEQADFAVEALAKATYERLFRWLVHRINKALD 330

GO:0003774 "motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

UNIPROTKB|F1NGG0 MYH10 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 207 (77.9 bits), Expect = 4.1e-15, P = 4.1e-15
 Identities = 38/53 (71%), Positives = 48/53 (90%)

Query:     2 TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
             T+A L PRIKVGRD+V K+QTKEQ +FAVEA++KA YER+FRWLV+RIN++LD
Sbjct:   288 TRAILTPRIKVGRDYVQKAQTKEQADFAVEALAKATYERLFRWLVHRINKALD 340

GO:0005524 "ATP binding" evidence=IEA

GO:0000146 "microfilament motor activity" evidence=IEA

GO:0000281 "cytokinesis after mitosis" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001725 "stress fiber" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

GO:0001778 "plasma membrane repair" evidence=IEA

GO:0005819 "spindle" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005938 "cell cortex" evidence=IEA

GO:0006887 "exocytosis" evidence=IEA

GO:0006930 "substrate-dependent cell migration, cell extension" evidence=IEA

GO:0007097 "nuclear migration" evidence=IEA

GO:0007411 "axon guidance" evidence=IEA

GO:0007512 "adult heart development" evidence=IEA

GO:0008283 "cell proliferation" evidence=IEA

GO:0008360 "regulation of cell shape" evidence=IEA

GO:0016460 "myosin II complex" evidence=IEA

GO:0021592 "fourth ventricle development" evidence=IEA

GO:0021670 "lateral ventricle development" evidence=IEA

GO:0021678 "third ventricle development" evidence=IEA

GO:0021680 "cerebellar Purkinje cell layer development" evidence=IEA

GO:0030048 "actin filament-based movement" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0030426 "growth cone" evidence=IEA

GO:0030496 "midbody" evidence=IEA

GO:0030898 "actin-dependent ATPase activity" evidence=IEA

GO:0031594 "neuromuscular junction" evidence=IEA

GO:0032154 "cleavage furrow" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0043197 "dendritic spine" evidence=IEA

GO:0043531 "ADP binding" evidence=IEA

GO:0050885 "neuromuscular process controlling balance" evidence=IEA

GO:0051015 "actin filament binding" evidence=IEA

GO:0055003 "cardiac myofibril assembly" evidence=IEA

GO:0055015 "ventricular cardiac muscle cell development" evidence=IEA

GO:0060041 "retina development in camera-type eye" evidence=IEA

ZFIN|ZDB-GENE-030131-5870 myh9a "myosin, heavy polypeptide 9a, non-muscle" [Danio rerio (taxid:7955)]

 Score = 207 (77.9 bits), Expect = 4.3e-15, P = 4.3e-15
 Identities = 39/53 (73%), Positives = 47/53 (88%)

Query:     2 TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
             T+A L PRIKVGRDFV K+QT+EQ EFAVEA++KA YER+FRWLV RIN++LD
Sbjct:   394 TRAILSPRIKVGRDFVQKAQTQEQAEFAVEALAKATYERLFRWLVMRINKALD 446

GO:0016459 "myosin complex" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

GO:0051015 "actin filament binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|Q27991 MYH10 "Myosin-10" [Bos taurus (taxid:9913)]

 Score = 207 (77.9 bits), Expect = 4.4e-15, P = 4.4e-15
 Identities = 38/53 (71%), Positives = 48/53 (90%)

Query:     2 TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
             T+A L PRIKVGRD+V K+QTKEQ +FAVEA++KA YER+FRWLV+RIN++LD
Sbjct:   393 TRAILTPRIKVGRDYVQKAQTKEQADFAVEALAKATYERLFRWLVHRINKALD 445

GO:0006930 "substrate-dependent cell migration, cell extension" evidence=ISS

GO:0006887 "exocytosis" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0001778 "plasma membrane repair" evidence=ISS

GO:0001764 "neuron migration" evidence=ISS

GO:0001725 "stress fiber" evidence=ISS

GO:0060041 "retina development in camera-type eye" evidence=IEA

GO:0055015 "ventricular cardiac muscle cell development" evidence=IEA

GO:0055003 "cardiac myofibril assembly" evidence=IEA

GO:0051015 "actin filament binding" evidence=IEA

GO:0050885 "neuromuscular process controlling balance" evidence=IEA

GO:0043531 "ADP binding" evidence=IEA

GO:0043197 "dendritic spine" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0032154 "cleavage furrow" evidence=IEA

GO:0031594 "neuromuscular junction" evidence=IEA

GO:0030898 "actin-dependent ATPase activity" evidence=IEA

GO:0030496 "midbody" evidence=IEA

GO:0030426 "growth cone" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0030048 "actin filament-based movement" evidence=IEA

GO:0021680 "cerebellar Purkinje cell layer development" evidence=IEA

GO:0021678 "third ventricle development" evidence=IEA

GO:0021670 "lateral ventricle development" evidence=IEA

GO:0021592 "fourth ventricle development" evidence=IEA

GO:0016460 "myosin II complex" evidence=IEA

GO:0008360 "regulation of cell shape" evidence=IEA

GO:0008283 "cell proliferation" evidence=IEA

GO:0007512 "adult heart development" evidence=IEA

GO:0007411 "axon guidance" evidence=IEA

GO:0007097 "nuclear migration" evidence=IEA

GO:0005938 "cell cortex" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005819 "spindle" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0000281 "cytokinesis after mitosis" evidence=IEA

GO:0000146 "microfilament motor activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P35748	MYH11_RABIT	No assigned EC number	0.6415	0.8833	0.0268	yes	N/A
Q62812	MYH9_RAT	No assigned EC number	0.6981	0.8833	0.0270	yes	N/A
Q258K2	MYH9_CANFA	No assigned EC number	0.6981	0.8833	0.0270	yes	N/A
Q8VDD5	MYH9_MOUSE	No assigned EC number	0.6981	0.8833	0.0270	yes	N/A
Q99323	MYSN_DROME	No assigned EC number	0.9074	0.9	0.0262	yes	N/A
P14105	MYH9_CHICK	No assigned EC number	0.6792	0.8833	0.0270	yes	N/A
P35579	MYH9_HUMAN	No assigned EC number	0.6981	0.8833	0.0270	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	60
cd01377	693	cd01377, MYSc_type_II, Myosin motor domain, type I	3e-30
pfam00063	679	pfam00063, Myosin_head, Myosin head (motor domain)	4e-20
smart00242	677	smart00242, MYSc, Myosin	5e-19
COG5022	1463	COG5022, COG5022, Myosin heavy chain [Cytoskeleton	3e-12
cd00124	679	cd00124, MYSc, Myosin motor domain	3e-11
cd01378	674	cd01378, MYSc_type_I, Myosin motor domain, type I	3e-09
cd01380	691	cd01380, MYSc_type_V, Myosin motor domain, type V	3e-07
cd01384	674	cd01384, MYSc_type_XI, Myosin motor domain, plant-	3e-06
cd01383	677	cd01383, MYSc_type_VIII, Myosin motor domain, plan	1e-05
cd01379	653	cd01379, MYSc_type_III, Myosin motor domain, type	2e-05
cd01382	717	cd01382, MYSc_type_VI, Myosin motor domain, type V	4e-04
PTZ00014	821	PTZ00014, PTZ00014, myosin-A; Provisional	0.001
cd01381	671	cd01381, MYSc_type_VII, Myosin motor domain, type	0.003

>gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins

 Score =  109 bits (276), Expect = 3e-30
 Identities = 35/55 (63%), Positives = 44/55 (80%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + KA L PRIKVGR++VTK Q  EQV F+V A++KA YER+F WLV RIN++LDT
Sbjct: 314 LLKALLHPRIKVGREWVTKGQNVEQVSFSVGALAKALYERLFLWLVKRINKTLDT 368

Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 693

>gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain)

 Score = 80.8 bits (200), Expect = 4e-20
 Identities = 27/55 (49%), Positives = 37/55 (67%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + KA LK RIK GR+ VTK Q  EQ  +A +A++KA Y R+F W+V +IN +L  
Sbjct: 302 LEKALLKRRIKTGRETVTKPQNVEQARYARDALAKAIYSRLFDWIVGKINEALSA 356

Length = 679

>gnl|CDD|214580 smart00242, MYSc, Myosin

 Score = 78.0 bits (193), Expect = 5e-19
 Identities = 25/55 (45%), Positives = 34/55 (61%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + KA  K +IK G + +TK    EQ   A +A++KA Y R+F WLV RIN+SL  
Sbjct: 309 LEKALTKRKIKTGGEVITKPLNVEQALDARDALAKALYSRLFDWLVKRINQSLSF 363

Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin. Length = 677

>gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton]

 Score = 58.6 bits (142), Expect = 3e-12
 Identities = 19/53 (35%), Positives = 32/53 (60%)

Query: 3   KAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           K  +K +IK G +++      EQ     ++++KA Y  +F W+V+RIN+SLD 
Sbjct: 370 KWLVKRQIKTGGEWIVVPLNLEQALAIRDSLAKALYSNLFDWIVDRINKSLDH 422

Length = 1463

>gnl|CDD|238071 cd00124, MYSc, Myosin motor domain

 Score = 55.7 bits (135), Expect = 3e-11
 Identities = 20/54 (37%), Positives = 33/54 (61%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           + +A      KVG + +T   TKE+   + ++++KA Y R+F W+V+RIN SL 
Sbjct: 302 LEEALTYKVTKVGGEVITIPLTKEEAVDSRDSLAKALYSRLFDWIVSRINSSLK 355

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 679

>gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins

 Score = 49.9 bits (120), Expect = 3e-09
 Identities = 15/39 (38%), Positives = 23/39 (58%)

Query: 17  VTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
                  EQ  +  +A++KA Y R+F WLV+RIN++L  
Sbjct: 321 YDVPLNVEQAAYTRDALAKAIYSRLFDWLVSRINKALQV 359

Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 674

>gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins

 Score = 44.2 bits (105), Expect = 3e-07
 Identities = 20/55 (36%), Positives = 34/55 (61%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + K  +K +I    + + K  TKEQ   A +A++K  Y ++F W+V+ IN+SL+T
Sbjct: 305 LRKWLVKRQIVTRSEKIVKPLTKEQAIVARDALAKHIYSKLFDWIVDVINKSLNT 359

Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 691

>gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport

 Score = 41.6 bits (98), Expect = 3e-06
 Identities = 17/53 (32%), Positives = 29/53 (54%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           +  A  K  +    + +TK    +  E + +A++K  Y R+F WLVN+IN S+
Sbjct: 307 LEDALCKRVMVTPEEVITKPLDPDSAELSRDALAKTIYSRLFDWLVNKINSSI 359

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 674

>gnl|CDD|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata

 Score = 40.2 bits (94), Expect = 1e-05
 Identities = 17/52 (32%), Positives = 30/52 (57%)

Query: 4   AFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           A    ++ V  D + +  T +Q   A +A++K+ Y  +F WLV +IN+SL+ 
Sbjct: 307 ALSTRKMHVNNDNIVQKLTLQQAIDARDALAKSIYASLFDWLVEQINKSLEV 358

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 677

>gnl|CDD|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins

 Score = 39.4 bits (92), Expect = 2e-05
 Identities = 15/34 (44%), Positives = 23/34 (67%)

Query: 17  VTKSQTKEQVEFAVEAISKACYERMFRWLVNRIN 50
           + +  T E+   A +A++KA Y R+F W+VNRIN
Sbjct: 324 IVRHNTVEKATDARDAMAKALYGRLFSWIVNRIN 357

Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 653

>gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins

 Score = 35.5 bits (82), Expect = 4e-04
 Identities = 11/31 (35%), Positives = 19/31 (61%)

Query: 23  KEQVEFAVEAISKACYERMFRWLVNRINRSL 53
            EQ   A +A++KA Y  +F  +V+R+N+  
Sbjct: 360 VEQANNARDALAKAVYSHLFDHVVSRVNQCF 390

Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 717

>gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional

 Score = 33.9 bits (78), Expect = 0.001
 Identities = 10/33 (30%), Positives = 24/33 (72%)

Query: 22  TKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           +K++ E   +++SKA YE++F W++  +N +++
Sbjct: 423 SKDESEMLKDSLSKAVYEKLFLWIIRNLNATIE 455

Length = 821

>gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins

 Score = 33.2 bits (76), Expect = 0.003
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 17  VTKSQTKEQVEFAVEAISKACYERMFRWLVNRIN 50
           V    ++EQ     +A  K  Y R+F W+V +IN
Sbjct: 317 VVTPLSREQAVDVRDAFVKGIYGRLFVWIVRKIN 350

Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 671

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	60
PTZ00014	821	myosin-A; Provisional	99.73
cd01381	671	MYSc_type_VII Myosin motor domain, type VII myosin	99.72
cd01385	692	MYSc_type_IX Myosin motor domain, type IX myosins.	99.72
COG5022	1463	Myosin heavy chain [Cytoskeleton]	99.72
cd01379	653	MYSc_type_III Myosin motor domain, type III myosin	99.72
cd01383	677	MYSc_type_VIII Myosin motor domain, plant-specific	99.72
cd01380	691	MYSc_type_V Myosin motor domain, type V myosins. M	99.72
cd01377	693	MYSc_type_II Myosin motor domain, type II myosins.	99.71
cd01387	677	MYSc_type_XV Myosin motor domain, type XV myosins.	99.71
cd01384	674	MYSc_type_XI Myosin motor domain, plant-specific t	99.7
KOG0164|consensus	1001		99.69
cd00124	679	MYSc Myosin motor domain. This catalytic (head) do	99.69
cd01378	674	MYSc_type_I Myosin motor domain, type I myosins. M	99.68
PF00063	689	Myosin_head: Myosin head (motor domain); InterPro:	99.68
smart00242	677	MYSc Myosin. Large ATPases. ATPase; molecular moto	99.67
cd01382	717	MYSc_type_VI Myosin motor domain, type VI myosins.	99.65
KOG0162|consensus	1106		99.58
cd01386	767	MYSc_type_XVIII Myosin motor domain, type XVIII my	99.52
KOG0163|consensus	1259		99.45
KOG0160|consensus	862		99.38
KOG4229|consensus	1062		99.22
KOG0161|consensus	1930		99.22

>PTZ00014 myosin-A; Provisional

Probab=99.73  E-value=5.8e-18  Score=122.91  Aligned_cols=58  Identities=21%  Similarity=0.439  Sum_probs=54.3

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMC   58 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~~   58 (60)
                      |.++|+++++.+|||.+.++++++||..+||||||+||+|||+|||.+||.+|.++++
T Consensus       402 L~~~L~~~~~~~~~e~i~~~~~~~qA~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~~  459 (821)
T PTZ00014        402 LKKELTVKVTYAGNQKIEGPWSKDESEMLKDSLSKAVYEKLFLWIIRNLNATIEPPGG  459 (821)
T ss_pred             HHHHhhceEEEeCCeeEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence            4578999999999999999999999999999999999999999999999999987543

>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins

Probab=99.72  E-value=8.7e-18  Score=119.95  Aligned_cols=56  Identities=25%  Similarity=0.388  Sum_probs=53.3

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTI   56 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~   56 (60)
                      |.++||++++.++||.+.+|++++||.++||||||+||+|||+|||.+||.++.++
T Consensus       301 L~~~lt~~~~~~~~e~i~~~~~~~qA~~~rdalak~lY~~lF~wiV~~IN~~l~~~  356 (671)
T cd01381         301 LMDALTSRTIFTRGETVVTPLSREQAVDVRDAFVKGIYGRLFVWIVRKINAAIYKP  356 (671)
T ss_pred             HhhhhceEEEEeCCceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence            46799999999999999999999999999999999999999999999999999765

Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr

>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins

Probab=99.72  E-value=8.4e-18  Score=120.33  Aligned_cols=58  Identities=24%  Similarity=0.319  Sum_probs=54.3

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMC   58 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~~   58 (60)
                      |.++|+++++.++||.+.+|++++||.+.||+|||+||+|||+|||.+||.++.++.+
T Consensus       313 L~~~l~~~~~~~~~e~i~~~~~~~qa~~~rdalak~lY~~LF~wiV~~IN~~l~~~~~  370 (692)
T cd01385         313 LMEALTKKRTVTVNETLILPYSLSEAITARDAMAKCLYSALFDWIVLRINHALLNKDD  370 (692)
T ss_pred             HHHHhccCeEEeCCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            4578999999999999999999999999999999999999999999999999987654

Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=99.72  E-value=4.8e-18  Score=127.27  Aligned_cols=58  Identities=33%  Similarity=0.581  Sum_probs=55.5

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMC   58 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~~   58 (60)
                      |.++|+.|+|++|||++.+|++..||..+||||||+||++||+|||++||.+|+.+..
T Consensus       368 f~k~lvk~~ikt~~E~i~~~~n~~QA~~irdslAK~lY~~lFdwiV~rIN~sL~~~~~  425 (1463)
T COG5022         368 FVKWLVKRQIKTGGEWIVVPLNLEQALAIRDSLAKALYSNLFDWIVDRINKSLDHSAA  425 (1463)
T ss_pred             HHHHHHHhHhhcCceEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccc
Confidence            5689999999999999999999999999999999999999999999999999998765

>cd01379 MYSc_type_III Myosin motor domain, type III myosins

Probab=99.72  E-value=9.8e-18  Score=119.45  Aligned_cols=57  Identities=30%  Similarity=0.464  Sum_probs=53.9

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIM   57 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~   57 (60)
                      |.++|+++++.++||.+.+|++++||.++||||||+||+|||+|||.+||.++.++.
T Consensus       308 L~~~L~~~~~~~~ge~i~~~~~~~qA~~~rdalak~lY~~LF~wiV~~IN~~l~~~~  364 (653)
T cd01379         308 LQEALTSHCVVTRGETIVRHNTVEKATDARDAMAKALYGRLFSWIVNRINSLLKHDR  364 (653)
T ss_pred             HHHHhcccEEEeCCceeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            467899999999999999999999999999999999999999999999999998754

Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the

>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata

Probab=99.72  E-value=1e-17  Score=119.74  Aligned_cols=57  Identities=30%  Similarity=0.475  Sum_probs=53.9

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIM   57 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~   57 (60)
                      |.++|+++++.++||.+.++++++||.++||+|||+||+|||+|||.+||.++.++.
T Consensus       304 L~~~l~~~~~~~~~e~~~~~~~~~qa~~~rdalak~lY~~lF~wiV~~IN~~l~~~~  360 (677)
T cd01383         304 LMLALSTRKMHVNNDNIVQKLTLQQAIDARDALAKSIYASLFDWLVEQINKSLEVGK  360 (677)
T ss_pred             HHHHhhhcEEEeCCceEeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            457899999999999999999999999999999999999999999999999998754

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f

>cd01380 MYSc_type_V Myosin motor domain, type V myosins

Probab=99.72  E-value=1e-17  Score=119.81  Aligned_cols=56  Identities=36%  Similarity=0.556  Sum_probs=53.5

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTI   56 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~   56 (60)
                      |.++|+++++.++||.+.++++++||.++||+|||+||+|||+|||.+||.++.++
T Consensus       305 L~~~l~~~~~~~~~e~i~~~~~~~qA~~~rdalak~lY~~LF~wiV~~iN~~l~~~  360 (691)
T cd01380         305 LRKWLVKRQIVTRSEKIVKPLTKEQAIVARDALAKHIYSKLFDWIVDVINKSLNTG  360 (691)
T ss_pred             HHHHHHhCEEEECCeeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence            45789999999999999999999999999999999999999999999999999876

Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act

>cd01377 MYSc_type_II Myosin motor domain, type II myosins

Probab=99.71  E-value=1.4e-17  Score=119.22  Aligned_cols=57  Identities=61%  Similarity=0.976  Sum_probs=53.9

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIM   57 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~   57 (60)
                      |.++|+++++.+++|.+.+|++++||.++||+|||+||++||+|||.+||.+|.++.
T Consensus       314 L~~~l~~~~~~~~~e~i~~~~~~~~A~~~rDalak~lY~~LF~wiV~~IN~~l~~~~  370 (693)
T cd01377         314 LLKALLHPRIKVGREWVTKGQNVEQVSFSVGALAKALYERLFLWLVKRINKTLDTKQ  370 (693)
T ss_pred             HHHHhcceEEEECCeeEeeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            457899999999999999999999999999999999999999999999999998763

Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro

>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins

Probab=99.71  E-value=1.6e-17  Score=118.68  Aligned_cols=58  Identities=26%  Similarity=0.348  Sum_probs=54.1

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMC   58 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~~   58 (60)
                      |.++||++.+.++||.+.+|++++||.++||+|||+||+|||+|||.+||.++.++.+
T Consensus       302 L~~~lt~~~~~~~~e~i~~~~~~~~a~~~rdalak~lY~~lF~wiV~~iN~~l~~~~~  359 (677)
T cd01387         302 LQKAITFKVTETRREKIFTPLTVESAVDARDAIAKVLYALLFNWLITRVNALVSPTQD  359 (677)
T ss_pred             HHHHhccCeEEeCCceEeccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            4578999999999999999999999999999999999999999999999999987543

In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus

>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport

Probab=99.70  E-value=2.2e-17  Score=117.94  Aligned_cols=57  Identities=30%  Similarity=0.539  Sum_probs=53.7

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIM   57 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~   57 (60)
                      |.++|+++++.+++|.+.++++++||.++||+|||+||+|||+|||.+||.++.++.
T Consensus       307 L~~~L~~~~~~~~~e~i~~~~~~~~a~~~rdalak~lY~~LF~wiV~~iN~~l~~~~  363 (674)
T cd01384         307 LEDALCKRVMVTPEEVITKPLDPDSAELSRDALAKTIYSRLFDWLVNKINSSIGQDP  363 (674)
T ss_pred             HHHHhcccEEEeCCceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            467899999999999999999999999999999999999999999999999998753

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act

>KOG0164|consensus

Probab=99.69  E-value=6.1e-18  Score=121.66  Aligned_cols=56  Identities=38%  Similarity=0.714  Sum_probs=53.1

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTI   56 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~   56 (60)
                      +.++|++|++.++||.+.+++++.||..+||||||++|+|||.|||.+||.+|...
T Consensus       310 l~~aL~~Rtvaa~~e~v~k~hn~~qA~YaRDAlAKaiY~RlF~Wiv~rIn~~i~~~  365 (1001)
T KOG0164|consen  310 LERALTSRTVAAGGEIVLKQHNVEQASYARDALAKAIYSRLFTWIVNRINRSIEVK  365 (1001)
T ss_pred             HHHHHHHHHHHhccchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhheecc
Confidence            35799999999999999999999999999999999999999999999999999764

>cd00124 MYSc Myosin motor domain

Probab=99.69  E-value=5.3e-17  Score=115.80  Aligned_cols=56  Identities=36%  Similarity=0.567  Sum_probs=53.3

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTI   56 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~   56 (60)
                      |.++|+++++.++||.+.++++++||.+.||+|||+||+|||+|||.+||.+|.++
T Consensus       302 L~~~l~~~~~~~~~~~~~~~~~~~~a~~~rdalak~lY~~lF~wiV~~iN~~l~~~  357 (679)
T cd00124         302 LEEALTYKVTKVGGEVITIPLTKEEAVDSRDSLAKALYSRLFDWIVSRINSSLKPK  357 (679)
T ss_pred             HHHHhhccEEEeCCceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            45789999999999999999999999999999999999999999999999999874

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila

>cd01378 MYSc_type_I Myosin motor domain, type I myosins

Probab=99.68  E-value=6.8e-17  Score=115.43  Aligned_cols=56  Identities=34%  Similarity=0.618  Sum_probs=53.1

Q ss_pred             CccccccceEEeCc----eEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q psy17851          1 MTKAFLKPRIKVGR----DFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTI   56 (60)
Q Consensus         1 l~~aL~~~~i~~~~----e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~   56 (60)
                      |.++|+++++.++|    |.+.+|++++||.+.||+|||+||+|||+|||.+||.+|.++
T Consensus       301 L~~~l~~~~~~~~~~~~~e~i~~~~~~~~a~~~rdalak~lY~~lF~wiV~~IN~~l~~~  360 (674)
T cd01378         301 LEKALTSRTIETGGGGRGEVYDVPLNVEQAAYTRDALAKAIYSRLFDWLVSRINKALQVK  360 (674)
T ss_pred             HHHHhcccEEEeCCCCCceeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            45789999999998    999999999999999999999999999999999999999875

Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon

>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril

Probab=99.68  E-value=4.3e-17  Score=115.76  Aligned_cols=57  Identities=42%  Similarity=0.619  Sum_probs=51.3

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIM   57 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~   57 (60)
                      |.++|+++++.+++|.+.++++++||...||+|||+||++||+|||.+||.+|.++.
T Consensus       303 L~~~l~~~~~~~~~e~~~~~~~~~~a~~~rdalak~LY~~LF~wIV~~iN~~L~~~~  359 (689)
T PF00063_consen  303 LEKALTTRTIKVGGETVTKPLSVEQASDARDALAKALYSRLFDWIVERINSALSPSE  359 (689)
T ss_dssp             HHHHHHSEEEESTTSEEEEE-BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--SS
T ss_pred             HHHHHhhccccccccccccccchhhhhhhhhhhhhhhhhHHHHHHHHhhhhcccccc
Confidence            457899999999999999999999999999999999999999999999999998865

Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....

>smart00242 MYSc Myosin

Probab=99.67  E-value=9.3e-17  Score=114.64  Aligned_cols=57  Identities=44%  Similarity=0.631  Sum_probs=53.8

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIM   57 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~   57 (60)
                      |.++|+++++.++||.+.++++++||.+.||+|||+||+|||+|||.+||.+|.+++
T Consensus       309 L~~~l~~~~~~~~~e~~~~~~~~~~a~~~rd~lak~lY~~lF~wiV~~iN~~l~~~~  365 (677)
T smart00242      309 LEKALTKRKIKTGGEVITKPLNVEQALDARDALAKALYSRLFDWLVKRINKSLSFKD  365 (677)
T ss_pred             HHHHhcccEEEeCCceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            457899999999999999999999999999999999999999999999999998764

Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.

>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins

Probab=99.65  E-value=2.3e-16  Score=113.31  Aligned_cols=56  Identities=20%  Similarity=0.295  Sum_probs=51.6

Q ss_pred             CccccccceEE-----eCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q psy17851          1 MTKAFLKPRIK-----VGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTI   56 (60)
Q Consensus         1 l~~aL~~~~i~-----~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~   56 (60)
                      |.++|+++.+.     ++||.+.+|++++||.+.||+|||+||+|||+|||.+||.++...
T Consensus       333 L~~~l~~r~~~~~~g~~~~~~i~~~l~~~qA~~~rdalak~lY~~LF~wiV~~IN~~l~~~  393 (717)
T cd01382         333 LRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKAVYSHLFDHVVSRVNQCFPFE  393 (717)
T ss_pred             HHHHHhheEEecccccCCCceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            45789998887     789999999999999999999999999999999999999999754

Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of

>KOG0162|consensus

Probab=99.58  E-value=9.9e-16  Score=110.77  Aligned_cols=54  Identities=26%  Similarity=0.581  Sum_probs=48.1

Q ss_pred             ccccccceEEe----CceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q psy17851          2 TKAFLKPRIKV----GRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT   55 (60)
Q Consensus         2 ~~aL~~~~i~~----~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~   55 (60)
                      +++||.|.+..    +.|++..||+++||...||||||+||.|||||||++||.+|..
T Consensus       319 ~~~Lt~R~M~s~~G~kr~~~~v~LNv~QA~~~RDAlakaiy~~lFD~lV~rvNkam~~  376 (1106)
T KOG0162|consen  319 EEKLTSRIMESKWGGKREVIHVPLNVEQASYTRDALAKAIYARLFDWLVERVNKAMQA  376 (1106)
T ss_pred             HHHHHHHHHhhcccccceeEEecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            46777777655    3499999999999999999999999999999999999999984

>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins

Probab=99.52  E-value=1.7e-14  Score=104.40  Aligned_cols=58  Identities=24%  Similarity=0.304  Sum_probs=47.2

Q ss_pred             CccccccceEEeCceE-------------EEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q psy17851          1 MTKAFLKPRIKVGRDF-------------VTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMC   58 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~-------------~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~~   58 (60)
                      |.++|+++++..+++.             +..+.++.||.++||||||+||+|||+|||.+||.+|.+++.
T Consensus       300 L~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~~  370 (767)
T cd01386         300 LSSATFKHTLRGGINQMTTGPQRPGLSDTETSSGLKMTAVECLEGMASGLYSELFAAVVSLINRSISSSHH  370 (767)
T ss_pred             HHHHhcccEEeecceeeeccccccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            3567777776665432             334678899999999999999999999999999999987654

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the

>KOG0163|consensus

Probab=99.45  E-value=1.3e-13  Score=100.46  Aligned_cols=47  Identities=28%  Similarity=0.456  Sum_probs=43.1

Q ss_pred             CceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q psy17851         13 GRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMCA   59 (60)
Q Consensus        13 ~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~~~   59 (60)
                      .|-.|.+|+.+.||...||||||++|++||+|||.+||+++......
T Consensus       404 kGTvIrVPLK~~eA~n~RDALaKaiYSkLFD~lV~~iNqsiPFe~St  450 (1259)
T KOG0163|consen  404 KGTVIRVPLKIHEASNARDALAKAIYSKLFDWLVGRINQSIPFEKST  450 (1259)
T ss_pred             cceEEEeeccHHhhcchHHHHHHHHHHHHHHHHHHHhhccccccccc
Confidence            46889999999999999999999999999999999999999765543

>KOG0160|consensus

Probab=99.38  E-value=2.7e-13  Score=99.10  Aligned_cols=56  Identities=30%  Similarity=0.407  Sum_probs=52.8

Q ss_pred             ccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy17851          2 TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIM   57 (60)
Q Consensus         2 ~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~   57 (60)
                      ..+|+.|.+.++++++.++++..||...||++||.||++||+|+|.+||.+|....
T Consensus       308 ~~~L~~r~i~~~~e~i~k~l~~~qa~~~rD~lak~iys~LFdwlV~~in~sL~~~~  363 (862)
T KOG0160|consen  308 EQWLSKRKILTARESIVKPLTLSQAVKRRDALAKQLYSLLFDWLVAKINGSLGAND  363 (862)
T ss_pred             HHHHHHHHhhcccceeecccCHHHHHHhhhhhHHHHHHHHHHHHHHHhhcccccCC
Confidence            46789999999999999999999999999999999999999999999999998744

>KOG4229|consensus

Probab=99.22  E-value=4.2e-12  Score=94.46  Aligned_cols=58  Identities=22%  Similarity=0.316  Sum_probs=55.1

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMC   58 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~~   58 (60)
                      |.++++.++....||.+..+++.++|.+.|||+||.+|+|||.|||.+||..+.++++
T Consensus       365 l~~alt~~~~~~~ge~~~~~l~~~~A~d~rda~ak~ly~~lf~~iv~rIn~~~~~~~~  422 (1062)
T KOG4229|consen  365 LQEALTARVNVTRGELLLAPLLVERAVDVRDAMAKTLYGRLFDWIVLRINAALSPESD  422 (1062)
T ss_pred             hhhhhcccceeeehhhhhhhhhHHHhccCchHHHHHHHHHHHHHHHhhHHhccCcccc
Confidence            4678999999999999999999999999999999999999999999999999998876

>KOG0161|consensus

Probab=99.22  E-value=7.6e-12  Score=96.78  Aligned_cols=56  Identities=64%  Similarity=1.025  Sum_probs=53.5

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTI   56 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~   56 (60)
                      |..++++|++++|++.+.+..+.+|+..+..+|||++|+|||.|||.|||.+++.+
T Consensus       388 ~~~al~~priKvg~e~v~k~q~~~q~~~~v~alAk~lYerlF~wlV~riN~sld~~  443 (1930)
T KOG0161|consen  388 FLKALLRPRIKVGREWVSKAQNVEQVLFAVEALAKALYERLFGWLVKRINKSLDSK  443 (1930)
T ss_pred             HHHHhcccceeccchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            45789999999999999999999999999999999999999999999999999876

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	60
2ycu_A	995	Crystal Structure Of Human Non Muscle Myosin 2c In		2e-17
1i84_S	1184	Cryo-Em Structure Of The Heavy Meromyosin Subfragme		7e-16
1br2_A	791	Smooth Muscle Myosin Motor Domain Complexed With Mg		1e-15
1br1_A	820	Smooth Muscle Myosin Motor Domain-Essential Light C		1e-15
3dtp_B	973	Tarantula Heavy Meromyosin Obtained By Flexible Doc		1e-15
3dtp_A	971	Tarantula Heavy Meromyosin Obtained By Flexible Doc		1e-15
3j04_A	909	Em Structure Of The Heavy Meromyosin Subfragment Of		1e-15
2ec6_A	838	Placopecten Striated Muscle Myosin Ii Length = 838		3e-13
2os8_A	840	Rigor-Like Structures Of Muscle Myosins Reveal Key		3e-13
2w4g_M	840	Isometrically Contracting Insect Asynchronous Fligh		2e-12
3i5g_A	839	Crystal Structure Of Rigor-Like Squid Myosin S1 Len		2e-12
1qvi_A	840	Crystal Structure Of Scallop Myosin S1 In The Pre-P		2e-12
1kk7_A	837	Scallop Myosin In The Near Rigor Conformation Lengt		2e-12
1b7t_A	835	Myosin Digested By Papain Length = 835		2e-12
1dfk_A	830	Nucleotide-Free Scallop Myosin S1-Near Rigor State		2e-12
1dfl_A	831	Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra		2e-12
4db1_A	783	Cardiac Human Myosin S1dc, Beta Isoform Complexed W		6e-12
2mys_A	843	Myosin Subfragment-1, Alpha Carbon Coordinates Only		3e-08
1m8q_A	840	Molecular Models Of Averaged Rigor Crossbridges Fro		3e-08
1mmd_A	762	Truncated Head Of Myosin From Dictyostelium Discoid		7e-07
1lvk_A	762	X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N		2e-06
1mmg_A	762	X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga		2e-06
1mmn_A	762	X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga		2e-06
3mkd_A	692	Crystal Structure Of Myosin-2 Dictyostelium Discoid		2e-06
3mnq_A	788	Crystal Structure Of Myosin-2 Motor Domain In Compl		2e-06
2jhr_A	788	Crystal Structure Of Myosin-2 Motor Domain In Compl		2e-06
2xel_A	776	Molecular Mechanism Of Pentachloropseudilin Mediate		2e-06
1yv3_A	762	The Structural Basis Of Blebbistatin Inhibition And		2e-06
3myh_X	762	Insights Into The Importance Of Hydrogen Bonding In		2e-06
1fmv_A	761	Crystal Structure Of The Apo Motor Domain Of Dictyo		2e-06
1w9l_A	770	Myosin Ii Dictyostelium Discoideum Motor Domain S45		2e-06
1w9i_A	770	Myosin Ii Dictyostelium Discoideum Motor Domain S45		2e-06
1w9j_A	770	Myosin Ii Dictyostelium Discoideum Motor Domain S45		2e-06
1w9k_A	770	Dictyostelium Discoideum Myosin Ii Motor Domain S45		2e-06
1g8x_A	1010	Structure Of A Genetically Engineered Molecular Mot		2e-06
1d0x_A	761	Dictyostelium Myosin S1dc (Motor Domain Fragment) C		2e-06
1mma_A	762	X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga		2e-06
2aka_A	776	Structure Of The Nucleotide-Free Myosin Ii Motor Do		2e-06
1jwy_A	776	Crystal Structure Of The Dynamin A Gtpase Domain Co		2e-06
2y9e_X	758	Structural Basis For The Allosteric Interference Of		2e-06
2y0r_X	758	Structural Basis For The Allosteric Interference Of		2e-06
2x9h_A	695	Crystal Structure Of Myosin-2 Motor Domain In Compl		4e-06
2xo8_A	776	Crystal Structure Of Myosin-2 In Complex With Tribr		4e-06

>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/53 (67%), Positives = 47/53 (88%)
Query: 2   TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           ++A L PRIKVGRD+V K+QTKEQ +FA+EA++KA YER+FRWLV R+NR+LD
Sbjct: 367 SRALLTPRIKVGRDYVQKAQTKEQADFALEALAKATYERLFRWLVLRLNRALD 419

>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 46/53 (86%)
Query: 2   TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           T++ L PRIKVGRD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD
Sbjct: 398 TRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALD 450

>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 46/53 (86%)
Query: 2   TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           T++ L PRIKVGRD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD
Sbjct: 398 TRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALD 450

>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 46/53 (86%)
Query: 2   TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           T++ L PRIKVGRD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD
Sbjct: 398 TRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALD 450

>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 46/53 (86%)
Query: 2   TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           T++ L PRIKVGRD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD
Sbjct: 398 TRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALD 450

>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 46/53 (86%)
Query: 2   TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           T++ L PRIKVGRD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD
Sbjct: 398 TRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALD 450

>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 46/53 (86%)
Query: 2   TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLD 54
           T++ L PRIKVGRD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD
Sbjct: 398 TRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALD 450

>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + KA LKP++KVG + VTK Q  +QV  +V A+SK+ Y+RMF WLV R+NR+LDT
Sbjct: 396 LLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLVKRVNRTLDT 450

>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + KA LKP++KVG + VTK Q  +QV  +V A+SK+ Y+RMF WLV R+NR+LDT
Sbjct: 395 LLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLVKRVNRTLDT 449

>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 43/55 (78%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + K  LKP+IKVG ++VT+ + K+QV  ++ A++K+ Y+RMF WLV R+N++LDT
Sbjct: 397 LLKCLLKPKIKVGTEYVTQGRNKDQVTNSIAALAKSLYDRMFNWLVRRVNQTLDT 451

>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 41/55 (74%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + KA LKP++KVG + VTK Q   QV  +V A++K+ Y+RMF WLV R+N++LDT
Sbjct: 394 LLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDT 448

>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 41/55 (74%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + KA LKP++KVG + VTK Q   QV  +V A++K+ Y+RMF WLV R+N++LDT
Sbjct: 394 LLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDT 448

>pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 41/55 (74%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + KA LKP++KVG + VTK Q   QV  +V A++K+ Y+RMF WLV R+N++LDT
Sbjct: 394 LLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDT 448

>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 41/55 (74%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + KA LKP++KVG + VTK Q   QV  +V A++K+ Y+RMF WLV R+N++LDT
Sbjct: 389 LLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDT 443

>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 41/55 (74%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + KA LKP++KVG + VTK Q   QV  +V A++K+ Y+RMF WLV R+N++LDT
Sbjct: 390 LLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDT 444

>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + K    PR+KVG ++VTK Q  +QV +A  A++KA YERMF W+V RIN +L+T
Sbjct: 395 LLKGLCHPRVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINATLET 449

>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + KA   PR+ VG + VT  +T  +V  +V A++ A YE MF W+V RIN+ LDT
Sbjct: 397 LLKALCYPRVGVGNEAVTXGETVSEVHNSVGALAXAVYEXMFLWMVIRINQQLDT 451

>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + KA   PR+ VG + VT  +T  +V  +V A++ A YE MF W+V RIN+ LDT
Sbjct: 394 LLKALCYPRVGVGNEAVTXGETVSEVHNSVGALAXAVYEXMFLWMVIRINQQLDT 448

>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMCAY 60
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L +   AY
Sbjct: 389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSERAAY 448

>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMCAY 60
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L +   AY
Sbjct: 389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSERKAY 448

>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMCAY 60
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L +   AY
Sbjct: 389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSERKAY 448

>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMCAY 60
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L +   AY
Sbjct: 389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSERKAY 448

>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 388 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 440

>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 400 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 452

>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 400 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 452

>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 388 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 440

>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441

>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441

>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441

>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441

>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441

>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441

>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441

>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMCAY 60
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L +   AY
Sbjct: 389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSERKAY 448

>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441

>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441

>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 400 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 452

>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 400 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 452

>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 388 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 440

>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 388 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 440

>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 388 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVL 440

>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSL 53
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L
Sbjct: 388 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVL 440

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	60
4db1_A	783	Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb	4e-25
1w9i_A	770	Myosin II heavy chain; molecular motor, ATPase, mo	4e-24
1w7j_A	795	Myosin VA; motor protein, unconventional myosin, m	9e-24
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	1e-23
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	1e-23
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	3e-23
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	9e-23
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	6e-22
1lkx_A	697	Myosin IE heavy chain; myosin motor domain, lever	5e-21
2v26_A	784	Myosin VI; calmodulin-binding, nucleotide-binding,	3e-19

>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783

 Score = 94.6 bits (236), Expect = 4e-25
 Identities = 28/55 (50%), Positives = 39/55 (70%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + K    PR+KVG ++VTK Q  +QV +A  A++KA YERMF W+V RIN +L+T
Sbjct: 395 LLKGLCHPRVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINATLET 449

>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770

 Score = 91.9 bits (229), Expect = 4e-24
 Identities = 22/55 (40%), Positives = 32/55 (58%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L  
Sbjct: 389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ 443

>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795

 Score = 90.8 bits (226), Expect = 9e-24
 Identities = 12/55 (21%), Positives = 26/55 (47%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           M       ++    +   K  +K     A +A++K  Y  +F W+V+ +N++L +
Sbjct: 371 MAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHS 425

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 90.1 bits (224), Expect = 1e-23
 Identities = 36/55 (65%), Positives = 47/55 (85%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
            ++A L PRIKVGRD+V K+QTKEQ +FA+EA++KA YER+FRWLV R+NR+LD 
Sbjct: 366 FSRALLTPRIKVGRDYVQKAQTKEQADFALEALAKATYERLFRWLVLRLNRALDR 420

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 90.1 bits (224), Expect = 1e-23
 Identities = 22/55 (40%), Positives = 33/55 (60%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L +
Sbjct: 389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCS 443

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837

 Score = 89.3 bits (222), Expect = 3e-23
 Identities = 29/55 (52%), Positives = 41/55 (74%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + KA LKP++KVG + VTK Q   QV  +V A++K+ Y+RMF WLV R+N++LDT
Sbjct: 394 LLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDT 448

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 87.9 bits (218), Expect = 9e-23
 Identities = 12/55 (21%), Positives = 26/55 (47%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           M       ++    +   K  +K     A +A++K  Y  +F W+V+ +N++L +
Sbjct: 371 MAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHS 425

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 85.7 bits (212), Expect = 6e-22
 Identities = 32/55 (58%), Positives = 46/55 (83%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
            T++ L PRIKVGRD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD 
Sbjct: 397 FTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDK 451

>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697

 Score = 83.0 bits (206), Expect = 5e-21
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)

Query: 1   MTKAFLKPRIKVGR----DFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           ++ A     I  G       ++      Q  ++ +A++KA YER+F WLV++IN  ++ 
Sbjct: 316 LSIALCYRSISTGVGKRCSVISVPMDCNQAAYSRDALAKALYERLFNWLVSKINTIINC 374

>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784

 Score = 78.1 bits (193), Expect = 3e-19
 Identities = 13/54 (24%), Positives = 22/54 (40%)

Query: 2   TKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           T+  L          +      EQ   A +A++K  Y  +F  +VNR+N+    
Sbjct: 388 TRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPF 441

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	60
1w7j_A	795	Myosin VA; motor protein, unconventional myosin, m	99.77
1w9i_A	770	Myosin II heavy chain; molecular motor, ATPase, mo	99.75
1lkx_A	697	Myosin IE heavy chain; myosin motor domain, lever	99.74
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	99.74
4db1_A	783	Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb	99.74
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	99.73
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	99.73
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	99.72
2v26_A	784	Myosin VI; calmodulin-binding, nucleotide-binding,	99.71
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	99.7
4anj_A	1052	Unconventional myosin-VI, green fluorescent prote;	99.65

>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A

Probab=99.77  E-value=4e-19  Score=127.44  Aligned_cols=57  Identities=21%  Similarity=0.440  Sum_probs=54.1

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIM   57 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~   57 (60)
                      |.++|++|++.++||.+.++++++||.++||||||+||+|||+|||.+||.+|..+.
T Consensus       371 L~~aL~~~~~~~~~e~v~~~~~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~~~  427 (795)
T 1w7j_A          371 MAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTV  427 (795)
T ss_dssp             HHHHHSEEEEECSSCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSS
T ss_pred             HHHHhcccEEEeCCceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence            457899999999999999999999999999999999999999999999999998764

>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...

Probab=99.75  E-value=1e-18  Score=125.19  Aligned_cols=57  Identities=39%  Similarity=0.635  Sum_probs=53.6

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIM   57 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~   57 (60)
                      |.++|++|++.+++|.+.++++++||.++||||||+||+|||+|||.+||.+|..++
T Consensus       389 L~~aL~~~~~~~~~e~v~~~~~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~~~  445 (770)
T 1w9i_A          389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQER  445 (770)
T ss_dssp             HHHHHHSCEEEETTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             HHHHhhCcEEEeCCeeEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            457899999999999999999999999999999999999999999999999998653

>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9

Probab=99.74  E-value=5.5e-19  Score=125.43  Aligned_cols=57  Identities=28%  Similarity=0.539  Sum_probs=47.9

Q ss_pred             CccccccceEEeC----ceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy17851          1 MTKAFLKPRIKVG----RDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIM   57 (60)
Q Consensus         1 l~~aL~~~~i~~~----~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~   57 (60)
                      |.++|++|++.++    ||.+.++++++||.++||||||+||+|||+|||.+||.+|..+.
T Consensus       316 L~~~L~~r~~~~~~g~~~e~i~~~l~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~~~  376 (697)
T 1lkx_A          316 LSIALCYRSISTGVGKRCSVISVPMDCNQAAYSRDALAKALYERLFNWLVSKINTIINCTT  376 (697)
T ss_dssp             HHHHHHBCC----------CCCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS
T ss_pred             HHHHHhccEEeeccCCCCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence            4578999999999    99999999999999999999999999999999999999998654

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=99.74  E-value=9.2e-19  Score=126.09  Aligned_cols=56  Identities=52%  Similarity=0.873  Sum_probs=49.2

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTI   56 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~   56 (60)
                      |.++||+|++.+|+|.+.++++++||.++||||||+||+|||+|||.+||.+|..+
T Consensus       394 L~~aL~~~~~~~~~e~v~~~~~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~~  449 (837)
T 1kk8_A          394 LLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTK  449 (837)
T ss_dssp             HHHHHHSCEEC----CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHHhcCcEEEcCCceEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence            45789999999999999999999999999999999999999999999999999854

>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*

Probab=99.74  E-value=5.9e-19  Score=126.50  Aligned_cols=57  Identities=49%  Similarity=0.852  Sum_probs=47.8

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIM   57 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~   57 (60)
                      |.++||+|++.+|+|.+.++++++||.++||||||+||+|||+|||.+||.+|..+.
T Consensus       395 L~~aL~~~~i~~~~e~v~~~~~~~qA~~~rdalAK~lY~rLF~wlV~~IN~~l~~~~  451 (783)
T 4db1_A          395 LLKGLCHPRVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINATLETKQ  451 (783)
T ss_dssp             HHHHHHSCC------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             HHHhhcceEEEeCCeeEeeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            457899999999999999999999999999999999999999999999999998753

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=99.73  E-value=1.6e-18  Score=127.00  Aligned_cols=57  Identities=21%  Similarity=0.440  Sum_probs=50.1

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIM   57 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~   57 (60)
                      |.++||++++.++||.+.+|++++||.++||||||+||+|||+|||.+||.+|.++.
T Consensus       371 L~~~l~~~~~~~~~e~i~~~~~~~qa~~~rdalak~lY~~LF~wlV~~iN~~l~~~~  427 (1080)
T 2dfs_A          371 MAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTV  427 (1080)
T ss_dssp             HHHHHHEEEECC----EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSS
T ss_pred             HHHHhcccEEEeCCceEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            457899999999999999999999999999999999999999999999999998765

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*

Probab=99.73  E-value=2e-18  Score=125.84  Aligned_cols=57  Identities=63%  Similarity=1.053  Sum_probs=53.8

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIM   57 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~   57 (60)
                      |.++||++++.+|+|.+.++++++||.++||||||+||+|||+|||.+||.+|..+.
T Consensus       366 L~~~l~~~~~~~~~e~v~~~~~~~qa~~~rdalak~lY~~LF~wlV~~iN~~l~~~~  422 (995)
T 2ycu_A          366 FSRALLTPRIKVGRDYVQKAQTKEQADFALEALAKATYERLFRWLVLRLNRALDRSP  422 (995)
T ss_dssp             HHHHHHSCEEESSSSEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS
T ss_pred             HHHHhcCcEEEcCCceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            457899999999999999999999999999999999999999999999999998654

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1

Probab=99.72  E-value=3.1e-18  Score=125.05  Aligned_cols=57  Identities=39%  Similarity=0.644  Sum_probs=53.6

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIM   57 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~   57 (60)
                      |.++||++++.+|+|.+.++++++||.++||||||+||+|||+|||.+||.+|..+.
T Consensus       389 L~~~l~~~~~~~~~e~v~~~~~~~qa~~~rdalak~lY~~LF~wlV~~IN~~l~~~~  445 (1010)
T 1g8x_A          389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSER  445 (1010)
T ss_dssp             HHHHHHSCEEESSSSEEECCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSS
T ss_pred             HHHHHhCcEEEeCCeeEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            457899999999999999999999999999999999999999999999999998653

>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*

Probab=99.71  E-value=3.6e-18  Score=122.39  Aligned_cols=56  Identities=20%  Similarity=0.302  Sum_probs=46.5

Q ss_pred             CccccccceEE-----eCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q psy17851          1 MTKAFLKPRIK-----VGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTI   56 (60)
Q Consensus         1 l~~aL~~~~i~-----~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~   56 (60)
                      |.++|++|++.     ++||.+.++++++||.++||||||+||+|||+|||.+||.+|...
T Consensus       382 L~~aL~~r~~~t~~g~~~ge~i~~~l~~~qA~~~rdalaK~lY~rLF~wlV~~IN~~l~~~  442 (784)
T 2v26_A          382 LRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFE  442 (784)
T ss_dssp             HHHHHHEEEC-----------CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             HHHHHhhcEEeccccCCCCCeEeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence            45789998887     679999999999999999999999999999999999999999754

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=99.70  E-value=4.8e-18  Score=124.70  Aligned_cols=56  Identities=57%  Similarity=1.030  Sum_probs=52.0

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTI   56 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~   56 (60)
                      |.++||++++.+|+|.+.++++++||.++||||||+||+|||+|||.+||.+|.++
T Consensus       397 l~~~l~~~~~~~~~e~~~~~~~~~~a~~~rdalak~lY~~lF~wlv~~iN~~l~~~  452 (1184)
T 1i84_S          397 FTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKT  452 (1184)
T ss_dssp             HHHHHHSCCCCCTTSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC--
T ss_pred             HHHHhcCcEEEeCCceEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            45789999999999999999999999999999999999999999999999999864

>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}

Probab=99.65  E-value=6.7e-17  Score=118.53  Aligned_cols=57  Identities=19%  Similarity=0.283  Sum_probs=43.7

Q ss_pred             ccccccceE-----EeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q psy17851          2 TKAFLKPRI-----KVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMC   58 (60)
Q Consensus         2 ~~aL~~~~i-----~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~~   58 (60)
                      .++|+++.+     .++||.+.++++++||.++||||||+||+|||+|||.+||.+|..+..
T Consensus       387 ~~aLt~r~~~~~~~~~~~e~i~~~l~~~qA~~~rDaLAK~LY~rLF~wiV~~IN~~l~~~~~  448 (1052)
T 4anj_A          387 RVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFPFETS  448 (1052)
T ss_dssp             HHHHHEEC-------------CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCC
T ss_pred             HHHHhhceeeecccccCceEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc
Confidence            456666655     468999999999999999999999999999999999999999987543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	60
d1d0xa2	712	c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain	2e-11
d1kk8a2	789	c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain	4e-11
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	6e-11
d1w7ja2	730	c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick	2e-10
d1br2a2	710	c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick	3e-10
d1lkxa_	684	c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli	1e-07

>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum [TaxId: 44689]

 Score = 54.3 bits (130), Expect = 2e-11
 Identities = 22/55 (40%), Positives = 32/55 (58%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + KA ++PRI  GRD V +    E+   + +A+ KA Y R+F WLV +IN  L  
Sbjct: 342 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQ 396

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 53.6 bits (128), Expect = 4e-11
 Identities = 29/55 (52%), Positives = 41/55 (74%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + KA LKP++KVG + VTK Q   QV  +V A++K+ Y+RMF WLV R+N++LDT
Sbjct: 346 LLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDT 400

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 53.2 bits (127), Expect = 6e-11
 Identities = 27/55 (49%), Positives = 38/55 (69%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           + KA   PR+ VG + VTK +T  +V  +V A++KA YE+MF W+V RIN+ LDT
Sbjct: 348 LLKALCYPRVGVGNEAVTKGETVSEVHNSVGALAKAVYEKMFLWMVIRINQQLDT 402

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

 Score = 51.3 bits (122), Expect = 2e-10
 Identities = 12/55 (21%), Positives = 26/55 (47%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           M       ++    +   K  +K     A +A++K  Y  +F W+V+ +N++L +
Sbjct: 309 MAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHS 363

>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 50.9 bits (121), Expect = 3e-10
 Identities = 32/58 (55%), Positives = 46/58 (79%)

Query: 1   MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMC 58
            T++ L PRIKVGRD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD    
Sbjct: 319 FTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTKR 376

>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]

 Score = 43.9 bits (103), Expect = 1e-07
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)

Query: 1   MTKAFLKPRIKVGR----DFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDT 55
           ++ A     I  G       ++      Q  ++ +A++KA YER+F WLV++IN  ++ 
Sbjct: 308 LSIALCYRSISTGVGKRCSVISVPMDCNQAAYSRDALAKALYERLFNWLVSKINTIINC 366

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	60
d1d0xa2	712	Myosin S1, motor domain {Dictyostelium discoideum	99.69
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	99.65
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	99.64
d1br2a2	710	Myosin S1, motor domain {Chicken (Gallus gallus),	99.64
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	99.63
d1lkxa_	684	Myosin S1, motor domain {Dictyostelium discoideum,	99.56

>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum [TaxId: 44689]

Probab=99.69  E-value=9e-18  Score=117.51  Aligned_cols=57  Identities=39%  Similarity=0.635  Sum_probs=53.6

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIM   57 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~   57 (60)
                      |.++|+++.+.++||.+.++++++||.++||+|||+||+|||+|||.+||.+|.+..
T Consensus       342 L~~~L~~~~~~~~~e~i~~~l~~~~A~~~rdalaK~LY~~LF~wiV~~IN~~l~~~~  398 (712)
T d1d0xa2         342 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQER  398 (712)
T ss_dssp             HHHHHHSCEEEETTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             hhhhhcceeeccCCceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCc
Confidence            357899999999999999999999999999999999999999999999999998754

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.65  E-value=3e-17  Score=115.71  Aligned_cols=57  Identities=51%  Similarity=0.853  Sum_probs=49.4

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIM   57 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~   57 (60)
                      |.++|+++.+.++||.+.+++++++|.+.||+|||+||++||+|||.+||.+|.++.
T Consensus       346 L~~~l~~~~~~~~~e~i~~~l~~~~a~~~rdalaK~lY~~LF~wIV~~IN~~L~~~~  402 (789)
T d1kk8a2         346 LLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKA  402 (789)
T ss_dssp             HHHHHHSCEEC----CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             hhcceeEEEEecccCceecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCC
Confidence            356899999999999999999999999999999999999999999999999997654

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=99.64  E-value=9.8e-17  Score=112.07  Aligned_cols=58  Identities=21%  Similarity=0.417  Sum_probs=54.0

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMC   58 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~~   58 (60)
                      |.++|+++++.+++|.+.+++++++|.+.||+|||+||++||+|||.+||.+|.++..
T Consensus       309 L~~~l~~~~~~~~~e~i~~~~~~~~a~~~rdalak~lY~~LF~wiv~~iN~~l~~~~~  366 (730)
T d1w7ja2         309 MAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVK  366 (730)
T ss_dssp             HHHHHSEEEEECSSCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSC
T ss_pred             HHHhhheeeEeeccceeecchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccc
Confidence            3578999999999999999999999999999999999999999999999999987653

>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=99.64  E-value=3.7e-17  Score=114.12  Aligned_cols=57  Identities=56%  Similarity=1.004  Sum_probs=41.9

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIM   57 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~   57 (60)
                      |.++|+++++.++||.+.+++++++|...||++||+||++||+|||.+||.+|.++.
T Consensus       319 L~~~L~~~~~~~~~e~i~~~l~~~~A~~~rdalak~LY~~LF~wiV~~iN~~l~~~~  375 (710)
T d1br2a2         319 FTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRWILTRVNKALDKTK  375 (710)
T ss_dssp             HHHHHHCC----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred             HHhhheeeEEEecCcceecchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            357899999999999999999999999999999999999999999999999997653

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=99.63  E-value=5.5e-17  Score=114.40  Aligned_cols=58  Identities=47%  Similarity=0.694  Sum_probs=53.8

Q ss_pred             CccccccceEEeCceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q psy17851          1 MTKAFLKPRIKVGRDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMC   58 (60)
Q Consensus         1 l~~aL~~~~i~~~~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~~   58 (60)
                      |.++|+++.+.++||.+.++++++||.+.||+|||+||++||+|||.+||.++.+.++
T Consensus       348 L~~~L~~~~~~~~~e~i~~~l~~~~a~~~rdalaK~LY~~LF~wiV~~IN~~l~~~~~  405 (794)
T d2mysa2         348 LLKALCYPRVGVGNEAVTKGETVSEVHNSVGALAKAVYEKMFLWMVIRINQQLDTKQP  405 (794)
T ss_dssp             HHHHHHSCBCCCSSSCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSC
T ss_pred             hhccceeeEEEecccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCC
Confidence            3568999999999999999999999999999999999999999999999999987543

>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]

Probab=99.56  E-value=7.3e-16  Score=107.23  Aligned_cols=57  Identities=28%  Similarity=0.505  Sum_probs=46.9

Q ss_pred             ccccccceEEeC----ceEEEeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q psy17851          2 TKAFLKPRIKVG----RDFVTKSQTKEQVEFAVEAISKACYERMFRWLVNRINRSLDTIMC   58 (60)
Q Consensus         2 ~~aL~~~~i~~~----~e~~~~~~~~~~a~~~rdalaK~lY~rLF~wiV~~IN~~l~~~~~   58 (60)
                      .++|+++.+.++    ++.+.++++++||.+.||+|||+||++||+|||.+||.+|.++.+
T Consensus       309 ~~~l~~~~i~~~~~~~~~~i~~~~~~~~A~~~rdalak~LY~~LF~wiv~~IN~~L~~~~~  369 (684)
T d1lkxa_         309 SIALCYRSISTGVGKRCSVISVPMDCNQAAYSRDALAKALYERLFNWLVSKINTIINCTTE  369 (684)
T ss_dssp             HHHHHBCC----------CCCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSC
T ss_pred             HhhhheeeeeecccccceEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCc
Confidence            467888888876    488999999999999999999999999999999999999987643