Psyllid ID: psy17867

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-
Protein Sequence
MNVFLLQGEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVVAHYSNRALDDDMR
Secondary Structure (PSIPRED)
ccEEccccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEcccHccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcHHHHHHHHcccHHHHHHHHHHccccHHcc
Coil and Loop (DISEMBL)
mnvfllqgepeeadnpntgiGAFRFMLetnkgrtmlEFQELMTVFQLLHWNGSLKAMRERQCSRQEVVAHYsnraldddmr
Flexible Loop (DISEMBL)
mnvfllqgepeeadnpntgiGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCsrqevvahysnraldddmr
Low Complexity Region (SEG)
MNVFLLQGEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVVAHYSNRALDDDMR
Disordered region (IsUnstruct)
******************GIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAM************************
Disordered Region (DISOPRED)
*******************IGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRER*CSRQEVVAHYSNRA******
Disordered Region (DISEMBL)
MNVFLLQGEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKA********QEVVAHYSNRALDDDMR
Disordered Region (DISPRO)
MNVFLLQGEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVVAHYSNRAL*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNVFLLQGEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVVAHYSNRALDDDMR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	81	2.2.26 [Sep-21-2011]
Q5PQQ7	338	LIX1-like protein OS=Ratt	yes	N/A	0.913	0.218	0.891	6e-35
Q8BQ89	337	LIX1-like protein OS=Mus	yes	N/A	0.913	0.219	0.891	7e-35
Q8IVB5	337	LIX1-like protein OS=Homo	yes	N/A	0.913	0.219	0.891	1e-34
Q6P566	282	Protein limb expression 1	no	N/A	0.925	0.265	0.64	5e-26
Q8N485	282	Protein limb expression 1	no	N/A	0.913	0.262	0.648	6e-26
Q8UVV7	281	Protein limb expression 1	yes	N/A	0.913	0.263	0.662	2e-24

>sp|Q5PQQ7|LIX1L_RAT LIX1-like protein OS=Rattus norvegicus GN=Lix1l PE=2 SV=1

 Score =  145 bits (366), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 66/74 (89%), Positives = 72/74 (97%)

Query: 8   GEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 67
           G  EEADNPNTGIGAFRFMLE+NKG++MLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV
Sbjct: 201 GNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 260

Query: 68  VAHYSNRALDDDMR 81
           +AHYS+RALDDD+R
Sbjct: 261 LAHYSHRALDDDIR 274

Rattus norvegicus (taxid: 10116)

>sp|Q8BQ89|LIX1L_MOUSE LIX1-like protein OS=Mus musculus GN=Lix1l PE=2 SV=2

 Score =  145 bits (366), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 66/74 (89%), Positives = 72/74 (97%)

Query: 8   GEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 67
           G  EEADNPNTGIGAFRFMLE+NKG++MLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV
Sbjct: 200 GNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 259

Query: 68  VAHYSNRALDDDMR 81
           +AHYS+RALDDD+R
Sbjct: 260 LAHYSHRALDDDIR 273

Mus musculus (taxid: 10090)

>sp|Q8IVB5|LIX1L_HUMAN LIX1-like protein OS=Homo sapiens GN=LIX1L PE=2 SV=1

 Score =  145 bits (365), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 66/74 (89%), Positives = 72/74 (97%)

Query: 8   GEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 67
           G  EEADNPNTGIGAFRFMLE+NKG++MLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV
Sbjct: 200 GNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 259

Query: 68  VAHYSNRALDDDMR 81
           +AHYS+RALDDD+R
Sbjct: 260 LAHYSHRALDDDIR 273

Homo sapiens (taxid: 9606)

>sp|Q6P566|LIX1_MOUSE Protein limb expression 1 homolog OS=Mus musculus GN=Lix1 PE=2 SV=1

 Score =  116 bits (290), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 48/75 (64%), Positives = 66/75 (88%)

Query: 7   QGEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQE 66
           +G  ++AD+P+T +GA+ +MLE+N G+TMLEFQELMT+FQLLHWNGSLKA+RE +CSRQE
Sbjct: 129 RGTLDDADDPSTSVGAYHYMLESNMGKTMLEFQELMTIFQLLHWNGSLKALRETKCSRQE 188

Query: 67  VVAHYSNRALDDDMR 81
           V+++YS  +LD+ MR
Sbjct: 189 VISYYSQYSLDEKMR 203

Mus musculus (taxid: 10090)

>sp|Q8N485|LIX1_HUMAN Protein limb expression 1 homolog OS=Homo sapiens GN=LIX1 PE=2 SV=2

 Score =  115 bits (289), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 65/74 (87%)

Query: 8   GEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 67
           G  ++AD+P+T +GA+ +MLE+N G+TMLEFQELMT+FQLLHWNGSLKA+RE +CSRQEV
Sbjct: 130 GTLDDADDPSTSVGAYHYMLESNMGKTMLEFQELMTIFQLLHWNGSLKALRETKCSRQEV 189

Query: 68  VAHYSNRALDDDMR 81
           +++YS  +LD+ MR
Sbjct: 190 ISYYSQYSLDEKMR 203

Homo sapiens (taxid: 9606)

>sp|Q8UVV7|LIX1_CHICK Protein limb expression 1 OS=Gallus gallus GN=LIX1 PE=2 SV=1

 Score =  110 bits (276), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/74 (66%), Positives = 64/74 (86%)

Query: 8   GEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 67
           G  ++AD+P+T IGA+ +MLE+N G+TMLEFQELM VFQLLHWNGSLKA+RE +CSRQEV
Sbjct: 130 GNLKDADDPSTSIGAYHYMLESNIGKTMLEFQELMIVFQLLHWNGSLKALRETKCSRQEV 189

Query: 68  VAHYSNRALDDDMR 81
           +++YS  +LD+ MR
Sbjct: 190 ISYYSQCSLDEKMR 203


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.322    0.134    0.396 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,313,815
Number of Sequences: 539616
Number of extensions: 893192
Number of successful extensions: 1503
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1497
Number of HSP's gapped (non-prelim): 6
length of query: 81
length of database: 191,569,459
effective HSP length: 52
effective length of query: 29
effective length of database: 163,509,427
effective search space: 4741773383
effective search space used: 4741773383
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)

Gallus gallus (taxid: 9031)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	81
293330612	176	Lowfat [Gryllus bimaculatus]	0.938	0.431	0.960	3e-37
91095051	325	PREDICTED: similar to conserved hypothet	0.938	0.233	0.947	6e-37
270014769	262	hypothetical protein TcasGA2_TC005181 [T	0.938	0.290	0.947	6e-37
321475874	258	hypothetical protein DAPPUDRAFT_22257 [D	0.938	0.294	0.921	4e-36
242015504	246	conserved hypothetical protein [Pediculu	0.938	0.308	0.921	5e-36
432882403	305	PREDICTED: LIX1-like protein-like [Oryzi	0.913	0.242	0.905	1e-33
348513410	343	PREDICTED: LIX1-like protein-like [Oreoc	0.913	0.215	0.905	1e-33
410910986	351	PREDICTED: LIX1-like protein-like [Takif	0.913	0.210	0.905	1e-33
47229363	356	unnamed protein product [Tetraodon nigro	0.913	0.207	0.905	1e-33
301630535	331	PREDICTED: LIX1-like protein-like [Xenop	0.913	0.223	0.905	2e-33

>gi|293330612|dbj|BAI99787.1| Lowfat [Gryllus bimaculatus]

 Score =  159 bits (401), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 73/76 (96%), Positives = 75/76 (98%)

Query: 6   LQGEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQ 65
            +G+PEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQ
Sbjct: 93  FKGDPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQ 152

Query: 66  EVVAHYSNRALDDDMR 81
           EVVAHYSNRALDDDMR
Sbjct: 153 EVVAHYSNRALDDDMR 168

Source: Gryllus bimaculatus

Species: Gryllus bimaculatus

Genus: Gryllus

Family: Gryllidae

Order: Orthoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91095051|ref|XP_972203.1| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum]

 Score =  157 bits (398), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 72/76 (94%), Positives = 75/76 (98%)

Query: 6   LQGEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQ 65
            +G+PEEADNPNTGIGAFRFMLE+NKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQ
Sbjct: 191 FKGDPEEADNPNTGIGAFRFMLESNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQ 250

Query: 66  EVVAHYSNRALDDDMR 81
           EVVAHYSNRALDDDMR
Sbjct: 251 EVVAHYSNRALDDDMR 266

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270014769|gb|EFA11217.1| hypothetical protein TcasGA2_TC005181 [Tribolium castaneum]

 Score =  157 bits (398), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 72/76 (94%), Positives = 75/76 (98%)

Query: 6   LQGEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQ 65
            +G+PEEADNPNTGIGAFRFMLE+NKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQ
Sbjct: 128 FKGDPEEADNPNTGIGAFRFMLESNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQ 187

Query: 66  EVVAHYSNRALDDDMR 81
           EVVAHYSNRALDDDMR
Sbjct: 188 EVVAHYSNRALDDDMR 203

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321475874|gb|EFX86835.1| hypothetical protein DAPPUDRAFT_22257 [Daphnia pulex]

 Score =  155 bits (391), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 70/76 (92%), Positives = 74/76 (97%)

Query: 6   LQGEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQ 65
            +G+P+EADNPNTGIGAFRFMLE NKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQ
Sbjct: 127 FKGDPDEADNPNTGIGAFRFMLEANKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQ 186

Query: 66  EVVAHYSNRALDDDMR 81
           EVVAHYS+RALDDDMR
Sbjct: 187 EVVAHYSHRALDDDMR 202

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242015504|ref|XP_002428393.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212513005|gb|EEB15655.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  154 bits (390), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 70/76 (92%), Positives = 72/76 (94%)

Query: 6   LQGEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQ 65
            +G P EADNPNTG+GAFRFMLE NKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQ
Sbjct: 109 FKGNPSEADNPNTGVGAFRFMLEANKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQ 168

Query: 66  EVVAHYSNRALDDDMR 81
           EVVAHYSNRALDDDMR
Sbjct: 169 EVVAHYSNRALDDDMR 184

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|432882403|ref|XP_004074013.1| PREDICTED: LIX1-like protein-like [Oryzias latipes]

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/74 (90%), Positives = 72/74 (97%)

Query: 8   GEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 67
           G  EEADNPNTGIGAFRFMLE+NKG++MLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV
Sbjct: 165 GNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 224

Query: 68  VAHYSNRALDDDMR 81
           +AHYS+RALDDDMR
Sbjct: 225 LAHYSHRALDDDMR 238

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348513410|ref|XP_003444235.1| PREDICTED: LIX1-like protein-like [Oreochromis niloticus]

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/74 (90%), Positives = 72/74 (97%)

Query: 8   GEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 67
           G  EEADNPNTGIGAFRFMLE+NKG++MLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV
Sbjct: 203 GNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 262

Query: 68  VAHYSNRALDDDMR 81
           +AHYS+RALDDDMR
Sbjct: 263 LAHYSHRALDDDMR 276

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|410910986|ref|XP_003968971.1| PREDICTED: LIX1-like protein-like [Takifugu rubripes]

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/74 (90%), Positives = 72/74 (97%)

Query: 8   GEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 67
           G  EEADNPNTGIGAFRFMLE+NKG++MLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV
Sbjct: 211 GNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 270

Query: 68  VAHYSNRALDDDMR 81
           +AHYS+RALDDDMR
Sbjct: 271 LAHYSHRALDDDMR 284

Source: Takifugu rubripes

Species: Takifugu rubripes

Genus: Takifugu

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|47229363|emb|CAF99351.1| unnamed protein product [Tetraodon nigroviridis]

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/74 (90%), Positives = 72/74 (97%)

Query: 8   GEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 67
           G  EEADNPNTGIGAFRFMLE+NKG++MLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV
Sbjct: 216 GNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 275

Query: 68  VAHYSNRALDDDMR 81
           +AHYS+RALDDDMR
Sbjct: 276 LAHYSHRALDDDMR 289

Source: Tetraodon nigroviridis

Species: Tetraodon nigroviridis

Genus: Tetraodon

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|301630535|ref|XP_002944372.1| PREDICTED: LIX1-like protein-like [Xenopus (Silurana) tropicalis]

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/74 (90%), Positives = 72/74 (97%)

Query: 8   GEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 67
           G  EEADNPNTGIGAFRFMLE+NKG++MLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV
Sbjct: 194 GNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 253

Query: 68  VAHYSNRALDDDMR 81
           +AHYS+RALDDDMR
Sbjct: 254 LAHYSHRALDDDMR 267

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	81
UNIPROTKB|A2VE91	337	LIX1L "Uncharacterized protein	0.913	0.219	0.891	2.3e-32
UNIPROTKB|Q8IVB5	337	LIX1L "LIX1-like protein" [Hom	0.913	0.219	0.891	2.3e-32
MGI|MGI:3036267	337	Lix1l "Lix1-like" [Mus musculu	0.913	0.219	0.891	2.3e-32
RGD|1593161	338	Lix1l "Lix1 homolog (mouse)-li	0.913	0.218	0.891	2.3e-32
FB|FBgn0032230	268	lft "lowfat" [Drosophila melan	0.925	0.279	0.8	2.4e-28
MGI|MGI:1913893	282	Lix1 "limb expression 1 homolo	0.925	0.265	0.64	2.6e-24

UNIPROTKB|A2VE91 LIX1L "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 66/74 (89%), Positives = 72/74 (97%)

Query:     8 GEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 67
             G  EEADNPNTGIGAFRFMLE+NKG++MLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV
Sbjct:   200 GNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 259

Query:    68 VAHYSNRALDDDMR 81
             +AHYS+RALDDD+R
Sbjct:   260 LAHYSHRALDDDIR 273

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|Q8IVB5 LIX1L "LIX1-like protein" [Homo sapiens (taxid:9606)]

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 66/74 (89%), Positives = 72/74 (97%)

Query:     8 GEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 67
             G  EEADNPNTGIGAFRFMLE+NKG++MLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV
Sbjct:   200 GNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 259

Query:    68 VAHYSNRALDDDMR 81
             +AHYS+RALDDD+R
Sbjct:   260 LAHYSHRALDDDIR 273

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

MGI|MGI:3036267 Lix1l "Lix1-like" [Mus musculus (taxid:10090)]

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 66/74 (89%), Positives = 72/74 (97%)

Query:     8 GEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 67
             G  EEADNPNTGIGAFRFMLE+NKG++MLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV
Sbjct:   200 GNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 259

Query:    68 VAHYSNRALDDDMR 81
             +AHYS+RALDDD+R
Sbjct:   260 LAHYSHRALDDDIR 273

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

RGD|1593161 Lix1l "Lix1 homolog (mouse)-like" [Rattus norvegicus (taxid:10116)]

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 66/74 (89%), Positives = 72/74 (97%)

Query:     8 GEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 67
             G  EEADNPNTGIGAFRFMLE+NKG++MLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV
Sbjct:   201 GNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 260

Query:    68 VAHYSNRALDDDMR 81
             +AHYS+RALDDD+R
Sbjct:   261 LAHYSHRALDDDIR 274

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

FB|FBgn0032230 lft "lowfat" [Drosophila melanogaster (taxid:7227)]

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 60/75 (80%), Positives = 66/75 (88%)

Query:     7 QGEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQE 66
             +G  +  +   +GIGAFRFMLE NKGRTMLEFQELMTVFQLLHWNGSLKAMRER CSRQE
Sbjct:   126 KGTSQINEGTESGIGAFRFMLEANKGRTMLEFQELMTVFQLLHWNGSLKAMRERHCSRQE 185

Query:    67 VVAHYSNRALDDDMR 81
             VVAHYSNR+LDD+MR
Sbjct:   186 VVAHYSNRSLDDEMR 200

GO:0035003 "subapical complex" evidence=IDA

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

MGI|MGI:1913893 Lix1 "limb expression 1 homolog (chicken)" [Mus musculus (taxid:10090)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 48/75 (64%), Positives = 66/75 (88%)

Query:     7 QGEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQE 66
             +G  ++AD+P+T +GA+ +MLE+N G+TMLEFQELMT+FQLLHWNGSLKA+RE +CSRQE
Sbjct:   129 RGTLDDADDPSTSVGAYHYMLESNMGKTMLEFQELMTIFQLLHWNGSLKALRETKCSRQE 188

Query:    67 VVAHYSNRALDDDMR 81
             V+++YS  +LD+ MR
Sbjct:   189 VISYYSQYSLDEKMR 203


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.134   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       81        81   0.00091  102 3  11 22  0.38    29
                                                     29  0.42    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  546 (58 KB)
  Total size of DFA:  104 KB (2071 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.63u 0.11s 8.74t   Elapsed:  00:00:02
  Total cpu time:  8.63u 0.11s 8.74t   Elapsed:  00:00:02
  Start:  Thu Aug 15 16:29:46 2013   End:  Thu Aug 15 16:29:48 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8UVV7	LIX1_CHICK	No assigned EC number	0.6621	0.9135	0.2633	yes	N/A
Q8IVB5	LIX1L_HUMAN	No assigned EC number	0.8918	0.9135	0.2195	yes	N/A
Q5PQQ7	LIX1L_RAT	No assigned EC number	0.8918	0.9135	0.2189	yes	N/A
Q8BQ89	LIX1L_MOUSE	No assigned EC number	0.8918	0.9135	0.2195	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	81
PF14954	252	LIX1: Limb expression 1	100.0

>PF14954 LIX1: Limb expression 1

Probab=100.00  E-value=1.7e-58  Score=353.53  Aligned_cols=80  Identities=81%  Similarity=1.257  Sum_probs=78.8

Q ss_pred             ccccccCCCCCCCCCCchHHHHHHHHHhcCCccHHHHHHHHHHHHHHhhcchhHHHHhhhhhHHHHHHHhhccccccccC
Q psy17867          2 NVFLLQGEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVVAHYSNRALDDDMR   81 (81)
Q Consensus         2 ~~~s~~g~~~d~~~p~t~igaf~~mLesn~GrtMLEFQElMTVFQLLHWNGSLKAmRer~CSRQeViahYs~r~LD~~mR   81 (81)
                      +++||+|+++|++|||||||||+||||+|+|||||||||+|||||||||||||||||||+|||||||||||||+||||||
T Consensus       117 A~~s~~~~~~~~~~p~t~igaf~~mLesn~GrtMLEFQElMTVFQLLHWNGSLKAmRer~CSRQeViahYs~r~LD~~mR  196 (252)
T PF14954_consen  117 AVASFSGKLEDADDPSTSIGAFRFMLESNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEVIAHYSQRSLDDDMR  196 (252)
T ss_pred             HHHhcCCCcccccCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhcchHHHHHHccccHHHHHHHHHhcchhHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00