Psyllid ID: psy1798

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350---
Protein Sequence
MGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccHHHHccccccccccccccHHHcccccHHHHHccccccccccccccccccccccccHHHHHcccccHHHHHHHHcccccccccccccccHHHHHcccccHHHHHHHcccccccccccccHHcccccccccccccccccccccccccccHHHHHcccccccHHHHHccccccccccccccccHHHHHcccccHHHHHHccccccccccccHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccHHHHHccccccccccccccHHHcccccHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEcccccccccccccccEccccHHHHHccccccccccccccccccEcccccHHHHEcHccccccccccccccccEEcccccccEccccccHHcHHHHEHEHHccccccEEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHccccccccccccccccccEccccccHHHHHHHHcccccccccEcccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHccccccccccccccccEccccHHHHHHHHHccccccccccccccccccEccccHHHHHHHHcccccccccccccccEcccccHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MGIAYLNDRRNVIMYRCFvcpylsrhkgdvkkhvrkhtgekpyecnlcdykatqnssiHFHMKVGVQAIFTSENVVLSGLHSCvhcygdlssatETELLDHCmqcsrdtcipgwfqcfrcrysnkFRSNFLRHIRthtghkpyactecgyasILSTDLRKHierihmpqfvEDVRHCVHCnkemhnldESFLLkhckycpslrtvgfQCYLCLYITRQSAHMRQHLRkhtgrrpfpcdmceYSAAQKWNLKMHMHFLCHHcnrfgsrdigdliehstqCSVMGIAYLNDRRNVIMYRCFvcpylsrhkgdvkkhvrkhtgekpyecnlcdykatqnssIHFHMKLkhnmpfip
Flexible Loop (DISEMBL)
mgiaylndrrnvIMYRCFVCPylsrhkgdvKKHVRkhtgekpyecnLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRthtghkpyacTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKhtgrrpfpcDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYlsrhkgdvKKHVRkhtgekpyecnlcDYKATQNSSIHFHMKLkhnmpfip
Low Complexity Region (SEG)
MGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP
Disordered region (IsUnstruct)
**IAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK*********
Disordered Region (DISOPRED)
*GIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKH**PFI*
Disordered Region (DISEMBL)
MGIAYLNDRRNVIMYRCFVCPYLSRHKG********HTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSA**********GRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKG********HTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP
Disordered Region (DISPRO)
MGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMP***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	353	2.2.26 [Sep-21-2011]
Q14591	655	Zinc finger protein 271 O	yes	N/A	0.864	0.465	0.294	8e-26
Q99KE8	643	Zinc finger protein 64 OS	yes	N/A	0.878	0.482	0.253	9e-26
Q5R5U3	672	Zinc finger protein 271 O	yes	N/A	0.864	0.453	0.303	1e-25
Q8WXB4	792	Zinc finger protein 606 O	yes	N/A	0.869	0.387	0.288	1e-24
Q9Y6Q3	630	Zinc finger protein 37 ho	no	N/A	0.883	0.495	0.288	3e-24
P15620	580	Zinc finger protein 271 O	no	N/A	0.864	0.525	0.300	6e-24
P17141	594	Zinc finger protein 37 OS	no	N/A	0.866	0.515	0.290	7e-24
P08045	1350	Zinc finger protein Xfin	N/A	N/A	0.872	0.228	0.282	1e-23
Q80W31	679	Zinc finger protein 569 O	no	N/A	0.832	0.432	0.284	2e-23
Q6ZMW2	699	Zinc finger protein 782 O	no	N/A	0.830	0.419	0.304	3e-23

>sp|Q14591|ZN271_HUMAN Zinc finger protein 271 OS=Homo sapiens GN=ZNF271 PE=2 SV=4

 Score =  118 bits (295), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 156/356 (43%), Gaps = 51/356 (14%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
           Y C  C        D+ KH R HTGEKPY+C+ C    +Q+S +  H ++ +        
Sbjct: 118 YSCNWCIKSFSWSSDLIKHQRVHTGEKPYKCDECGKAFSQSSDLIIHQRIHIGE------ 171

Query: 75  VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHI 134
                 + C HC    S    ++L+ H     R       + C +C       S+ ++H 
Sbjct: 172 ----KPYQCRHCSKSFSQ--RSDLVKH----QRIHTGEKPYTCNQCNKHFSQSSDVIKHQ 221

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLK 194
           R HTG KPY C  CG A   S+DL  H +RIH     E    C  C+K       S L+K
Sbjct: 222 RIHTGEKPYKCDVCGKAFSQSSDLILH-QRIHT---GEKPYPCNQCSKSFSQ--NSDLIK 275

Query: 195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           H +     +   ++C  C     QS+ +  H R HTG +P+PCD C  + ++  +L  H 
Sbjct: 276 HRRIHTGEKP--YKCNECGKAFNQSSVLILHQRIHTGEKPYPCDQCSKTFSRLSDLINHQ 333

Query: 255 H-------FLCHHCNRFGSRDIGDLIEH--------STQCSVMGIAYLNDRRNVIM---- 295
                   + C+ CN+  SR   DL++H          +C   G  + +   N+I+    
Sbjct: 334 RIHTGEKPYPCNQCNKMFSRR-SDLVKHHRIHTGEKPYECDECGKTF-SQSSNLILHQRI 391

Query: 296 ------YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
                 Y C  C      + D+ KH R HTGEKPY CN CD   +Q+S +  H ++
Sbjct: 392 HTGEKPYACSDCTKSFSRRSDLVKHQRIHTGEKPYACNQCDKSFSQSSDLTKHQRV 447

May be involved in transcriptional regulation. Plays a role in the EBV-mediated transformation process.
Homo sapiens (taxid: 9606)

>sp|Q99KE8|ZFP64_MOUSE Zinc finger protein 64 OS=Mus musculus GN=Zfp64 PE=2 SV=1

 Score =  117 bits (294), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 163/375 (43%), Gaps = 65/375 (17%)

Query: 11  NVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIF 70
            V  Y+C  C Y +     + KH+R H+ E+P++C +C Y +  +S +  H++    ++ 
Sbjct: 197 GVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTASVL 256

Query: 71  TSENVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSN-KFRS- 128
            ++    +GL +      + S A +   +   ++    T   G  + F CRY    F++ 
Sbjct: 257 ENDVQKPAGLPA------EESDAQQAPAVTLSLEAKERTATLGE-RTFNCRYPGCHFKTV 309

Query: 129 ----NFLRHIRTHTGHKPYACT----------------------------ECGYASILST 156
               +  RH+R HTG KP+ C                              C YA++ S+
Sbjct: 310 HGMKDLDRHLRIHTGDKPHKCEFCDKCFSRKDNLTMHMRCHTSVKPHKCHLCDYAAVDSS 369

Query: 157 DLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYIT 216
            L+KH+ RIH  +     + C + ++    L    L  H    P      FQC+LC    
Sbjct: 370 SLKKHL-RIHSDERPYKCQLCPYASRNSSQL-TVHLRSHTGDTP------FQCWLCSAKF 421

Query: 217 RQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMH----FLCHHCNRFGSRDIGDL 272
           + S+ +++H+  H+G +PF C+ C+     K NLK H+     F C HC  F  RD  DL
Sbjct: 422 KISSDLKRHMIVHSGEKPFKCEFCDVRCTMKANLKSHIRIKHTFKCLHCA-FQGRDRADL 480

Query: 273 IEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYK 332
           +EHS         +  D       +C  C Y   +   ++ H R H  ++P++C+ C + 
Sbjct: 481 LEHSR-------LHQADHPE----KCPECSYSCSNPAALRVHSRVHCTDRPFKCDFCSFD 529

Query: 333 ATQNSSIHFHMKLKH 347
             + SS+  H+   H
Sbjct: 530 TKRPSSLAKHIDKVH 544

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q5R5U3|ZN271_PONAB Zinc finger protein 271 OS=Pongo abelii GN=ZNF271 PE=2 SV=1

 Score =  117 bits (293), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 156/356 (43%), Gaps = 51/356 (14%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
           Y C  C        D+ KH R HTGEKPY+C+ C    +Q+S +  H     Q I T E 
Sbjct: 135 YSCNWCIKSFSRSSDLIKHQRVHTGEKPYKCDECGKAFSQSSDLIIH-----QRIHTGEK 189

Query: 75  VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHI 134
                 + C HC    S    ++L+ H     R       + C +C       S+ ++H 
Sbjct: 190 P-----YQCSHCSKSFSQ--RSDLVKH----QRIHTGEKPYTCNQCNKHFSQSSDVIKHQ 238

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLK 194
           R HTG KPY C  C  A   S+DL  H +RIH     E    C  C+K       S L+K
Sbjct: 239 RIHTGEKPYKCDVCAKAFSQSSDLILH-QRIHT---GEKPYPCNQCSKSFSQ--NSDLIK 292

Query: 195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           H +     +   ++C  C     QS+ +  H R HTG +P+PCD C  + ++  +L  H 
Sbjct: 293 HRRIHTGEKP--YKCNECGKAFNQSSVLILHQRIHTGEKPYPCDQCSKTFSRLSDLINHQ 350

Query: 255 H-------FLCHHCNRFGSRDIGDLIEH--------STQCSVMGIAYLNDRRNVIM---- 295
                   + C+ CN+  SR   DL++H          +C   G  + +   N+I+    
Sbjct: 351 RIHTGEKPYPCNQCNKMFSRR-SDLVKHHRIHTGEKPYECDECGKTF-SQSSNLILHQRI 408

Query: 296 ------YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
                 Y C  C      + D+ KH R HTGEKPY CN CD   +Q+S +  H ++
Sbjct: 409 HTGEKPYPCSDCTKSFSRRSDLVKHQRIHTGEKPYACNQCDKSFSQSSDLTKHQRV 464

May be involved in transcriptional regulation.

Pongo abelii (taxid: 9601)

>sp|Q8WXB4|ZN606_HUMAN Zinc finger protein 606 OS=Homo sapiens GN=ZNF606 PE=2 SV=1

 Score =  114 bits (285), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 148/354 (41%), Gaps = 47/354 (13%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
           Y C  C  + R++  + KH R HTG KPYECN C    + NS +  H ++         N
Sbjct: 428 YECDKCGKVFRNRSALTKHERTHTGIKPYECNKCGKAFSWNSHLIVHKRIHTGEKPYVCN 487

Query: 75  VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGW----------------FQCF 118
                 +   H  G   + T  +  + C +C +      W                F+C 
Sbjct: 488 ECGKSFNWNSHLIGHQRTHTGEKPFE-CTECGKSF---SWSSHLIAHMRMHTGEKPFKCD 543

Query: 119 RCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCV 178
            C  + +  S   +H RTH+G KPY CTECG +   S+ L  H +R H     E   +C 
Sbjct: 544 ECEKAFRDYSALSKHERTHSGAKPYKCTECGKSFSWSSHLIAH-QRTHTG---EKPYNCQ 599

Query: 179 HCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCD 238
            C K     + S L KH      ++   ++C  C     Q AH+ +H R HTG +P+ C+
Sbjct: 600 ECGKAFR--ERSALTKHEIIHSGIKP--YECNKCGKSCSQMAHLVRHQRTHTGEKPYECN 655

Query: 239 MCEYSAAQKWNLKMHMH-------FLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRR 291
            C  S +Q  +L  H         + C+ C R            S  CS   IA+     
Sbjct: 656 KCGKSFSQSCHLVAHRRIHTGEKPYKCNQCER------------SFNCSSHLIAHRRTHT 703

Query: 292 NVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
               YRC  C         +  H+R HTGEKPY+CN C+    +NSS+  H ++
Sbjct: 704 GEKPYRCNECGKAFNESSSLIVHLRNHTGEKPYKCNHCEKAFCKNSSLIIHQRM 757

May act as a transcriptional repressor.

Homo sapiens (taxid: 9606)

>sp|Q9Y6Q3|ZFP37_HUMAN Zinc finger protein 37 homolog OS=Homo sapiens GN=ZFP37 PE=2 SV=3

 Score =  112 bits (281), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 137/353 (38%), Gaps = 41/353 (11%)

Query: 12  VIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFT 71
           V  Y C  C  +  HK  +  H R HTGEKPYECN C    +Q S +  H +        
Sbjct: 290 VKPYECNQCGKVLSHKQGLIDHQRVHTGEKPYECNECGIAFSQKSHLVVHQRTHT-GEKP 348

Query: 72  SENVVLSGLHSCVHCYGDLSSATETELLDHCMQCS-------------RDTCIPGWFQCF 118
            E +     H   H   D       E    C +C              R       ++C 
Sbjct: 349 YECIQCGKAHGHKHALTDHLRIHTGEKPYECAECGKTFRHSSNLIQHVRSHTGEKPYECK 408

Query: 119 RCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCV 178
            C  S ++ S+   H+RTHTG  PY C ECG A   S+ L KH+ RIH     E    C 
Sbjct: 409 ECGKSFRYNSSLTEHVRTHTGEIPYECNECGKAFKYSSSLTKHM-RIHT---GEKPFECN 464

Query: 179 HCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCD 238
            C K      +S L+ H +     +   ++C  C      S+ +  H+R HTG  PF C+
Sbjct: 465 ECGKAF--SKKSHLIIHQRT--HTKEKPYKCNECGKAFGHSSSLTYHMRTHTGESPFECN 520

Query: 239 MCEYSAAQKWNLKMHMH-------FLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRR 291
            C     Q   L  H         + C+ C +  S+    ++   T              
Sbjct: 521 QCGKGFKQIEGLTQHQRVHTGEKPYECNECGKAFSQKSHLIVHQRTHTGEK--------- 571

Query: 292 NVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
               Y C  C      K  +  H R HTGEKPYECN C     QN+S+  H+K
Sbjct: 572 ---PYECNECEKAFNAKSQLVIHQRSHTGEKPYECNECGKTFKQNASLTKHVK 621

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P15620|ZN271_MOUSE Zinc finger protein 271 OS=Mus musculus GN=Znf271 PE=2 SV=1

 Score =  112 bits (279), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 152/356 (42%), Gaps = 51/356 (14%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
           Y C  C        D+ KH R HTGEKPY+C+ C    +Q+S +  H     Q I T E 
Sbjct: 132 YPCSWCIKSFSRSSDLIKHQRVHTGEKPYKCDECGKAFSQSSDLMIH-----QRIHTGEK 186

Query: 75  VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHI 134
                 + C HC    S    + ++ H     R       + C  C       S+ ++H 
Sbjct: 187 P-----YQCSHCSKSFSQ--HSGMVKHL----RIHTGEKPYMCNHCYKHFSQSSDLIKHQ 235

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLK 194
           R HTG KPY C  CG A   S+D   H +RIH     E    C  CNK       S L+K
Sbjct: 236 RIHTGEKPYKCDVCGKAFSQSSDRILH-QRIHT---GEKPYPCAQCNKSFSQ--NSDLIK 289

Query: 195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           H +     +   ++C  C     QS+ +  H R HTG +P+PC+ C  S ++  +L  H 
Sbjct: 290 HRRIHTGEKP--YKCSECGKAFNQSSVLILHQRIHTGEKPYPCNQCTKSFSRLSDLINHQ 347

Query: 255 H-------FLCHHCNRFGSRDIGDLIEH--------STQCSVMGIAYLNDRRNVIM---- 295
                   + C  C++  SR   DL++H          +C   G  + +   N+I+    
Sbjct: 348 RIHTGEKPYPCSQCSKMFSRR-SDLVKHYRIHTGEKPYECDKCGKTF-SQSSNLILHQRI 405

Query: 296 ------YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
                 Y C  C        D+ KH R HTGEKPY CNLC    +Q+S +  H ++
Sbjct: 406 HTGEKPYPCNSCSKSFSRGSDLIKHQRVHTGEKPYTCNLCSKSFSQSSDLTKHQRV 461

May act to control gene activity during the pachytene stage of meiotic prophase. May function as a transcription activator.

Mus musculus (taxid: 10090)

>sp|P17141|ZFP37_MOUSE Zinc finger protein 37 OS=Mus musculus GN=Zfp37 PE=2 SV=4

 Score =  111 bits (278), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 148/355 (41%), Gaps = 49/355 (13%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
           Y C  C  +  HK  +  H R HTGEKPYECN C    +Q S +  H     Q   T E 
Sbjct: 255 YECNHCGKVLSHKQGLLDHQRTHTGEKPYECNECGIAFSQKSHLVVH-----QRTHTGEK 309

Query: 75  VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHI 134
                 + C  C    +   +  L DH     R       ++C  C  + +  SN ++H+
Sbjct: 310 P-----YECEQC--GKAHGHKHALTDHL----RIHTGEKPYKCNECGKTFRHSSNLMQHL 358

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLK 194
           R+HTG KPY C ECG +   ++ L +H+ R H  +   +   C  C K       S L K
Sbjct: 359 RSHTGEKPYECKECGKSFRYNSSLTEHV-RTHTGEIPYE---CNECGKAFKYG--SSLTK 412

Query: 195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           H +     +   F+C  C     + +H+  H R HT  +P+ CD C  +     +L  HM
Sbjct: 413 HMRIHTGEKP--FECNECGKTFSKKSHLVIHQRTHTKEKPYKCDECGKAFGHSSSLTYHM 470

Query: 255 H-------FLCHHCNRFGSRDIGDLIEHST--------QCSVMGIAYLNDRRNVIMYR-- 297
                   F C+ C +   + I  L +H          +C   G A+      ++  R  
Sbjct: 471 RTHTGDCPFECNQCGK-AFKQIEGLTQHQRVHTGEKPYECVECGKAFSQKSHLIVHQRTH 529

Query: 298 -------CFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
                  C+ C      K  +  H R HTGEKPYEC  C     QN+S+  HMK+
Sbjct: 530 TGEKPFECYECGKAFNAKSQLVIHQRSHTGEKPYECIECGKAFKQNASLTKHMKI 584

May have a role in regulating spermiogenesis.

Mus musculus (taxid: 10090)

>sp|P08045|XFIN_XENLA Zinc finger protein Xfin OS=Xenopus laevis PE=1 SV=1

 Score =  111 bits (277), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 160/404 (39%), Gaps = 96/404 (23%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
           ++C  C      K D+ KH+R HTGEKP++C LC    +QNS +H H +     I T E 
Sbjct: 531 FQCAECKKGFTQKSDLVKHIRVHTGEKPFKCLLCKKSFSQNSDLHKHWR-----IHTGEK 585

Query: 75  VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHI 134
                   C  C  D S    + L+ H     R        +C  C+     +S   +H 
Sbjct: 586 PF-----PCYTC--DKSFTERSALIKH----HRTHTGERPHKCSVCQKGFIQKSALTKHS 634

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLK 194
           RTHTG KPY CT+CG + I ++DL KH +RIH     E   HC  CNK     + S L+K
Sbjct: 635 RTHTGEKPYPCTQCGKSFIQNSDLVKH-QRIHT---GEKPYHCTECNKRF--TEGSSLVK 688

Query: 195 H-----------CKYC---------------------PSLRTV----------------- 205
           H           C  C                     P   T                  
Sbjct: 689 HRRTHSGEKPYRCPQCEKTFIQSSDLVKHLVVHNGENPPAATAFHEILIRRENLTRSEPD 748

Query: 206 GFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMH-------FLC 258
            + C  C  +  Q   + +HLR H   + +PC+ C+ S  Q  +L  H+        + C
Sbjct: 749 PYPCTECGKVFHQRPALLKHLRTHKTEKRYPCNECDKSFFQTSDLVKHLRTHTGERPYHC 808

Query: 259 HHCNRFGSRDIGDLIEHS-----------TQCSVMGI------AYLNDRRNVIMYRCFVC 301
             CN+ G     DL++H            +QC    I       ++        Y+C  C
Sbjct: 809 PECNK-GFIQNSDLVKHQRTHTGERPYTCSQCDKGFIQRSALTKHMRTHTGEKPYKCEQC 867

Query: 302 PYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
                   D+ KH R HTGEKPY C  CD + T+ SS+  H ++
Sbjct: 868 QKCFIQNSDLVKHQRIHTGEKPYHCPDCDKRFTEGSSLIKHQRI 911

Binds to poly-G sequences in RNA. May function in post-translational regulation processes.

Xenopus laevis (taxid: 8355)

>sp|Q80W31|ZN569_MOUSE Zinc finger protein 569 OS=Mus musculus GN=Znf569 PE=2 SV=2

 Score =  110 bits (274), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 146/337 (43%), Gaps = 43/337 (12%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
           Y C  C         +  H+R HTGEKPY+C+ C    +Q S +  H++V      T E 
Sbjct: 319 YACNECGKAFPRVASLALHMRGHTGEKPYKCDKCGKAFSQFSMLIIHVRV-----HTGEK 373

Query: 75  VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHI 134
               G   C   +   SSA    +  H  +          ++C  CR S   + NF+ H 
Sbjct: 374 PYECG--ECGKAFSQ-SSALTVHIRSHTGE--------KPYECKECRKSFSHKKNFITHQ 422

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLK 194
           + HT  KPY C ECG A I  ++L +H +RIH     E    C  C K      +S L+ 
Sbjct: 423 KIHTREKPYGCNECGKAFIQMSNLVRH-QRIHT---GEKPYLCKECGKAFSQ--KSNLIA 476

Query: 195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           H K     +   ++C  C     Q  +   H + HTG +P+ C+ C  + +Q  +L +H+
Sbjct: 477 HEKIHSGEKP--YECNECGKAFSQKQNFITHQKVHTGEKPYDCNKCGKAFSQIASLTLHL 534

Query: 255 H-------FLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRH 307
                   + C  C +  S           QCS++ + ++        Y C  C      
Sbjct: 535 RSHTGEKPYECEKCGKAFS-----------QCSLLNL-HMRSHTGEKPYVCNECGKAFSQ 582

Query: 308 KGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
           +  +  H+R HTGEKPYECN C    +Q+SS+  H++
Sbjct: 583 RTSLIVHMRGHTGEKPYECNKCGKAFSQSSSLTIHIR 619

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q6ZMW2|ZN782_HUMAN Zinc finger protein 782 OS=Homo sapiens GN=ZNF782 PE=2 SV=1

 Score =  109 bits (273), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 141/338 (41%), Gaps = 45/338 (13%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
           Y C  C      K  ++KH R HTGEKPY+C+ CD   +  S +  H     Q   T E 
Sbjct: 394 YECPECGKAFSEKSRLRKHQRTHTGEKPYKCDGCDKAFSAKSGLRIH-----QRTHTGEK 448

Query: 75  VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHI 134
                 H C   +   S      L+ H     R       F+C  C  S    S    H 
Sbjct: 449 PFE--CHECGKSFNYKSI-----LIVH----QRTHTGEKPFECNECGKSFSHMSGLRNHR 497

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLK 194
           RTHTG +PY C ECG A  L + LRKH    H     E    C  C K      +S L  
Sbjct: 498 RTHTGERPYKCDECGKAFKLKSGLRKH----HRTHTGEKPYKCNQCGKAF--GQKSQLRG 551

Query: 195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           H +     +   ++C  C     Q +++R H R HTG +P+ C+ C  +  QK NL+ H 
Sbjct: 552 HHRIHTGEKP--YKCNHCGEAFSQKSNLRVHHRTHTGEKPYQCEECGKTFRQKSNLRGHQ 609

Query: 255 H-------FLCHHCNR-FGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSR 306
                   + C+ C + F  + +  L +H  Q +  G            Y C  C     
Sbjct: 610 RTHTGEKPYECNECGKAFSEKSV--LRKH--QRTHTGEK---------PYNCNQCGEAFS 656

Query: 307 HKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
            K +++ H R HTGEKPY+C+ C    +Q SS+  H K
Sbjct: 657 QKSNLRVHQRTHTGEKPYKCDKCGRTFSQKSSLREHQK 694

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	353
260808231	1222	hypothetical protein BRAFLDRAFT_122442 [	0.835	0.241	0.321	9e-39
260811181	1010	hypothetical protein BRAFLDRAFT_118280 [	0.815	0.285	0.309	1e-37
260781332	655	hypothetical protein BRAFLDRAFT_257357 [	0.770	0.415	0.313	1e-37
260804287	556	hypothetical protein BRAFLDRAFT_76512 [B	0.912	0.579	0.329	1e-37
260813270	773	hypothetical protein BRAFLDRAFT_82748 [B	0.832	0.380	0.319	1e-37
260811482	631	hypothetical protein BRAFLDRAFT_70175 [B	0.858	0.480	0.328	2e-37
260781005	382	hypothetical protein BRAFLDRAFT_111659 [	0.875	0.808	0.305	2e-37
260810939	3220	hypothetical protein BRAFLDRAFT_66688 [B	0.886	0.097	0.305	6e-37
260823044	540	hypothetical protein BRAFLDRAFT_71718 [B	0.832	0.544	0.294	8e-37
260813384	589	hypothetical protein BRAFLDRAFT_243940 [	0.847	0.507	0.318	1e-36

>gi|260808231|ref|XP_002598911.1| hypothetical protein BRAFLDRAFT_122442 [Branchiostoma floridae] gi|229284186|gb|EEN54923.1| hypothetical protein BRAFLDRAFT_122442 [Branchiostoma floridae]

 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 165/336 (49%), Gaps = 41/336 (12%)

Query: 15   YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
            Y C  C Y +  K  +  H+R HTGEKP++C+ CDY A Q  ++  H    + A  + E 
Sbjct: 913  YMCGECGYRAARKFTLSVHMRTHTGEKPFKCDQCDYSAAQKINLDNH----IAAKHSGEK 968

Query: 75   VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHI 134
                  + C  C  D S+A ++ L  H M+ + +      + C  C Y   ++S   +H+
Sbjct: 969  P-----YKCDKC--DYSAALKSTLDCHLMKHTGEK----PYMCGECGYRTSWKSRLSKHM 1017

Query: 135  RTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLK 194
            RTHTG KPY C ECGY + + +DL  H+ RIH  +       C +      +L      +
Sbjct: 1018 RTHTGEKPYKCGECGYRTAVKSDLSIHV-RIHTGEKPYKCDQCDYSAANKSSLKNHLAAR 1076

Query: 195  HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
            H    P      + C  C Y T QS+++ +H+R HTG +P+ CD C+YSAA K++L +H+
Sbjct: 1077 HTGEKP------YMCGECGYRTYQSSNLSRHMRTHTGEKPYKCDQCDYSAAHKYSLDIHL 1130

Query: 255  H-------FLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRH 307
                    ++C  C  + +    DL  H           +     V  Y C  C Y +  
Sbjct: 1131 AKHTGEKPYMCGECG-YRTAHKSDLTLH-----------VKTHTGVKPYTCGECGYRAAK 1178

Query: 308  KGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHM 343
            K  + +H+R HTGEKPY+C+ CDY A Q + + FH+
Sbjct: 1179 KSHLSQHMRTHTGEKPYKCDQCDYSAAQKAHLKFHV 1214

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260811181|ref|XP_002600301.1| hypothetical protein BRAFLDRAFT_118280 [Branchiostoma floridae] gi|229285587|gb|EEN56313.1| hypothetical protein BRAFLDRAFT_118280 [Branchiostoma floridae]

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 168/342 (49%), Gaps = 54/342 (15%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHM---KVGVQAIFT 71
           Y+C  C Y +  KG++  H+RKHTGEKP++C  CDY A   SS+ +H+     G      
Sbjct: 74  YKCDQCDYSAAQKGNLDNHMRKHTGEKPFKCGQCDYSAAHQSSLDYHIMSKHTGKMEGQR 133

Query: 72  SENVVLSGL-----HSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKF 126
           +++V+L        H C HC    S+  +++L  H  + + +      F+C +C YS   
Sbjct: 134 AQDVLLLDAALAASHRCHHC--KYSAPYKSQLTRHMRKHTGEK----PFKCDQCDYSAAL 187

Query: 127 RSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHN 186
           + + + H+R HTG +PY C +C Y++    +L  H+ R H  +       C +      +
Sbjct: 188 KGSLINHMRQHTGERPYKCDQCDYSAAQKGNLDNHM-RKHTGEKPFKCGQCDYSAAHQSS 246

Query: 187 LDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQ 246
           LD   + KH    P      ++C  C + T Q  ++  H+RKHTG +P+ CD C+YSAAQ
Sbjct: 247 LDYHIMSKHTGERP------YKCNQCDFSTAQKGNLDLHMRKHTGEKPYKCDQCDYSAAQ 300

Query: 247 KWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSR 306
           K +L  HM                   +H+ +                 ++C  C Y + 
Sbjct: 301 KGHLDHHMR------------------KHTGE---------------KPFKCDQCDYSAA 327

Query: 307 HKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHN 348
            K ++ +H+RKHTGEKPY+C+LCDY A +  S+  H+  KH 
Sbjct: 328 QKCNLDQHMRKHTGEKPYKCDLCDYSAAKKGSLDHHIMRKHT 369

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260781332|ref|XP_002585771.1| hypothetical protein BRAFLDRAFT_257357 [Branchiostoma floridae] gi|229270812|gb|EEN41782.1| hypothetical protein BRAFLDRAFT_257357 [Branchiostoma floridae]

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 160/338 (47%), Gaps = 66/338 (19%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
           Y C  C Y + HK D+ +H+R HTGEKPY+C+ CDY ATQ   +  H+     A  TS+ 
Sbjct: 337 YMCGECGYRTAHKSDLSRHMRTHTGEKPYKCDQCDYSATQKFHLDLHL-----AKHTSDK 391

Query: 75  VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHI 134
             +   + C  C  D ++A ++ L  H ++ + +      + C  C Y     SN  RH+
Sbjct: 392 PYMEKPYKCDQC--DYATARKSHLDKHLLKHTGEN----PYMCGECGYRAVQMSNLSRHM 445

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLK 194
           RTHTG KPY C +C Y++   + L +H                              L K
Sbjct: 446 RTHTGEKPYKCDQCDYSAAQKSTLDQH------------------------------LAK 475

Query: 195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           H    P      + C  C Y T + +H+ +H+R HTG +P+ CD C+YSAAQK+ L +H+
Sbjct: 476 HTDNKP------YMCEECGYRTAKKSHLSKHMRTHTGEKPYKCDQCDYSAAQKYQLDLHL 529

Query: 255 H-------FLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRH 307
                   ++C  C    +R   DL +H           +       ++ C  C Y +  
Sbjct: 530 AKHTGDKPYMCGECGYRTARKC-DLSKH-----------MRTHTGEKLHMCGECGYRTAR 577

Query: 308 KGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
           K D+ +H+R HTGEKPY+C+ CDY A Q   +  H+ +
Sbjct: 578 KFDLSRHMRTHTGEKPYKCDRCDYSAAQKRDLDRHITI 615

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260804287|ref|XP_002597020.1| hypothetical protein BRAFLDRAFT_76512 [Branchiostoma floridae] gi|229282281|gb|EEN53032.1| hypothetical protein BRAFLDRAFT_76512 [Branchiostoma floridae]

 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/358 (32%), Positives = 168/358 (46%), Gaps = 36/358 (10%)

Query: 4   AYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHM- 62
           A  N+RR    Y C  C Y + +K D+ +H+RKHTGEKPY+C+ CDY AT  +++  H+ 
Sbjct: 53  AQTNERR----YVCVDCGYRTANKNDLSRHIRKHTGEKPYKCDQCDYSATLKANLERHLL 108

Query: 63  -----------KVGVQAIFTSENVVLSGLHSCVHCYG----DLSSATETELLDHCMQCSR 107
                      + G +    S   +    H+ +  Y     D S+A ++ L  H    S 
Sbjct: 109 QHTGDKPYMCGECGHRTTQQSALAIHMRTHTGIKPYKCDQCDYSAAQKSNLDSHLANHSD 168

Query: 108 DTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHM 167
           +      F C  C +    R +  RH+RTHT  KPY C EC Y +I   DL +H+ R H 
Sbjct: 169 EK----PFMCEECGFRTAHRRHLSRHMRTHTAEKPYMCGECEYKTIQKCDLSRHM-RTHT 223

Query: 168 PQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLR 227
            + +     C +   +   L ES LLKH           + C  C Y T + + + QH+R
Sbjct: 224 GENLYKCGQCDYSAAQKSTL-ESHLLKH------TGEKSYMCGECGYRTTKKSTLTQHMR 276

Query: 228 KHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYL 287
            HTG +P  CD C+YSAA K NL  H+         F   + G    H    S     ++
Sbjct: 277 IHTGIKPHECDKCDYSAAHKSNLDRHLRAEHSDDKPFMCGECGFRAAHRRHLS----GHM 332

Query: 288 NDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
                   Y+C  C Y +  K  +  HV KHTG+KPY C  C+YKATQ S +  HM++
Sbjct: 333 RSHTAEKPYKCDQCDYSAARKHHLDIHVAKHTGDKPYMCGECEYKATQKSDLSRHMRI 390

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260813270|ref|XP_002601341.1| hypothetical protein BRAFLDRAFT_82748 [Branchiostoma floridae] gi|229286636|gb|EEN57353.1| hypothetical protein BRAFLDRAFT_82748 [Branchiostoma floridae]

 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 156/335 (46%), Gaps = 41/335 (12%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
           Y C  C Y +  K D+ KH++ HTGEKPY+C+ CDY A Q  S+  H+     A  T + 
Sbjct: 414 YMCGECGYRTVQKCDLSKHMKTHTGEKPYKCDQCDYSAVQKQSLDLHL-----AKHTGDK 468

Query: 75  VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHI 134
             + G                T    H  Q  R    P  ++C +C YS  F S   RH+
Sbjct: 469 PYMCG-----------ECGYRTACKSHLSQHMRIHTGPKPYKCDQCDYSATFNSTLKRHL 517

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLK 194
             HT  KPY C ECGY +   +DL KH+ R H         +C +     +NLD+  L K
Sbjct: 518 TKHTTEKPYMCGECGYRTARKSDLGKHM-RTHTGYKPYSCDYCDYSAARKYNLDQ-HLAK 575

Query: 195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           H    P      + C  C Y T Q + + +H+R HTG+RP+ CD C+YS+AQK  L  H+
Sbjct: 576 HTGDKP------YMCGECGYRTTQKSDLSKHMRTHTGQRPYKCDQCDYSSAQKSTLDRHL 629

Query: 255 HFLCHHCNRFGSRDIGDLIEHSTQCSVMGI------AYLNDRRNVIMYRCFVCPYLSRHK 308
                      ++  GD      +C            ++        Y+C  C Y +  K
Sbjct: 630 -----------AKHTGDKPYMCGECGYRTALKYTLSEHMKTHTGEKPYKCGECGYRTAQK 678

Query: 309 GDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHM 343
             + +H+R H+G+KPY+C+ C+Y A  NS++  H+
Sbjct: 679 SKLSQHMRTHSGQKPYKCDQCNYSAALNSTLKQHL 713

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260811482|ref|XP_002600451.1| hypothetical protein BRAFLDRAFT_70175 [Branchiostoma floridae] gi|229285738|gb|EEN56463.1| hypothetical protein BRAFLDRAFT_70175 [Branchiostoma floridae]

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/338 (32%), Positives = 166/338 (49%), Gaps = 35/338 (10%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
           YRC  C Y +  K ++ +H+ KHTGEKPY C +C Y+ATQ SS+  HM+       T + 
Sbjct: 41  YRCDQCDYSAAQKSNLDQHLTKHTGEKPYMCGVCGYRATQKSSLTVHMRT-----HTGDK 95

Query: 75  VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHI 134
                 + C  C  D S+AT+T L  H  + + +      + C  C Y    +++ ++H+
Sbjct: 96  P-----YKCDQC--DYSAATKTALDYHLAKHTGEK----PYMCGECGYRTARKTDLVQHM 144

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLK 194
           RTHTG KPY C ECGY +   T L  HI R H  +       C +   +    D   L K
Sbjct: 145 RTHTGEKPYICDECGYRTTRKTTLANHI-RTHTGEKPYKCDQCDYSAAQKAVFD-CHLTK 202

Query: 195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           H    P      F C  C Y +   + + QH++ H+G +P+ CD C+YSAA+K++L  H+
Sbjct: 203 HKGEKP------FMCDKCGYRSAHKSALSQHMKTHSGEKPYKCDQCDYSAAEKYSLDYHL 256

Query: 255 H-------FLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRH 307
                   ++C  C   G+R     I      +  G  Y+ +  +   Y C  C Y +  
Sbjct: 257 SKHTGDKPYMCGEC---GNRTASKPIVSRHMKTHKGRPYMCEECDKP-YMCGECGYRTAK 312

Query: 308 KGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
           K  + +H++ HTG+KPY C  C Y+  Q SS+  HMK 
Sbjct: 313 KSYLSQHMKTHTGDKPYMCGECGYRTAQKSSLSQHMKT 350

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260781005|ref|XP_002585619.1| hypothetical protein BRAFLDRAFT_111659 [Branchiostoma floridae] gi|229270637|gb|EEN41630.1| hypothetical protein BRAFLDRAFT_111659 [Branchiostoma floridae]

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 167/350 (47%), Gaps = 41/350 (11%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK--VGVQAIFTS 72
           Y+C  C Y ++ K D+  H+R HTGEKPY+CN CDY A + SS+  H+    G +     
Sbjct: 10  YKCGQCDYAAKWKSDLSIHLRIHTGEKPYKCNHCDYSAARKSSLDLHLTKHTGEKPYMCG 69

Query: 73  ENVVLSGLHSCVHCYGDLSSATETELLDHC-----------MQCSRDTCIPGWFQCFRCR 121
           E    +GL SC+  +  + S  +    D C              ++DT    +  C  C 
Sbjct: 70  ECGYRAGLKSCLTKHMKIHSGEKPYKCDQCDYSAVQKTSLDFHLAKDTGEKPYI-CGECG 128

Query: 122 YSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCN 181
           Y    +S+ L+H++TH+G KP+ C +C Y+++  + L  H+ R H  +       C +  
Sbjct: 129 YRAGLKSSLLKHMKTHSGEKPFKCDQCDYSALQKSSLSDHV-RTHTGEKPYKCDQCDYSV 187

Query: 182 KEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCE 241
               NL +  LLKH    P      + C  C +     ++   H+R HTG +P+ CD C+
Sbjct: 188 AHKSNLAQ-HLLKHTGEKP------YMCGECGFRAAHKSNPIAHMRTHTGEKPYKCDQCD 240

Query: 242 YSAAQKWNLKMHMH-------FLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVI 294
           YSAA+K+NL  H+        ++C  C        G    H +      IA++       
Sbjct: 241 YSAAEKYNLVEHLRKHTGEKPYMCGEC--------GFRAAHKSN----SIAHMRTHTGEK 288

Query: 295 MYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
            Y+C  C Y +  K ++ +H+RKHTGEKPY C  C Y+    S++  HM+
Sbjct: 289 PYKCDQCDYSAAEKYNLVEHLRKHTGEKPYMCGECGYRTAHKSNLSAHMR 338

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260810939|ref|XP_002600180.1| hypothetical protein BRAFLDRAFT_66688 [Branchiostoma floridae] gi|229285466|gb|EEN56192.1| hypothetical protein BRAFLDRAFT_66688 [Branchiostoma floridae]

 Score =  160 bits (406), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 179/413 (43%), Gaps = 100/413 (24%)

Query: 8    DRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK--VG 65
            DRR    + C  C + +  K  + +HVRKHTGEKPY+CN C+Y A Q  S+  HM    G
Sbjct: 1069 DRR----FACMECDFRASSKQGLSRHVRKHTGEKPYKCNQCEYAAAQKCSLDRHMDKHTG 1124

Query: 66   VQAIFTSENVVLSGLHS----------------CVHCYGDLSSATETELLDHCMQCSRDT 109
             +     E    + + S                C HC  D S+A +T L++H     R  
Sbjct: 1125 EKPFMCDECGFRAAIRSRLSLHMRKHTGEKPYKCDHC--DYSAALKTSLVNHM----RKH 1178

Query: 110  CIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQ 169
                 F+C +C YS   + N  RH+  HTG KPY C ECGY + + +DL +HI R H  +
Sbjct: 1179 TGEKPFKCDQCEYSATQKKNLDRHMAKHTGEKPYMCGECGYRTTMRSDLSRHI-RTHTGE 1237

Query: 170  FVEDVRHCVHCNKEMHNL------------DESFLLKHCKY------------------- 198
                   C +     ++L            D+ +    C Y                   
Sbjct: 1238 KTYKCDQCKYSTSHKYHLDRHVLGHTGEKADKKYKCDECDYRTARKDCLGQHLLRHRGEK 1297

Query: 199  ---CP--SLRTV----------------GFQCYLCLYITRQSAHMRQHLRKHTGRRPFPC 237
               CP    RT+                 ++C  C Y T    H+++H+ KHTG RP+ C
Sbjct: 1298 PYTCPQCEYRTIHKSCLTAHMQIHSGEKPYKCDQCDYSTSWKTHLKRHMLKHTGDRPYMC 1357

Query: 238  DMCEYSAAQKWNLKMHMH-------FLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDR 290
              C Y AAQK +L  HM        F CH C  + + + G L  H  Q       +  D+
Sbjct: 1358 GECGYRAAQKVSLSRHMRTHTGEKPFKCHLCE-YSAAEKGSLKNHLAQ-------HTGDK 1409

Query: 291  RNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHM 343
                 Y C  C Y + H G ++ H+RKHTGEKPY+C+ CDY +T + ++  H 
Sbjct: 1410 ----PYMCGQCGYSTTHLGSLRTHMRKHTGEKPYKCDQCDYSSTSSRNLKRHQ 1458

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260823044|ref|XP_002603993.1| hypothetical protein BRAFLDRAFT_71718 [Branchiostoma floridae] gi|229289318|gb|EEN60004.1| hypothetical protein BRAFLDRAFT_71718 [Branchiostoma floridae]

 Score =  160 bits (405), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 167/374 (44%), Gaps = 80/374 (21%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
           + C  C Y +    D+ KH+R HTGE+PY+C+ CD+ A QN S+H HM     A+ T +N
Sbjct: 84  FMCGECGYRTVQMSDLTKHMRIHTGERPYKCDQCDFSAAQNYSLHSHMVDRHTAMHTGDN 143

Query: 75  V-------------------------VLSGLHSCVHCYGDLSSATETELLDHCMQCSRDT 109
                                          ++C HC  D S++ ++ L  H +      
Sbjct: 144 DKPYICAECGYRATHKCTLAYHMRTHTGEKPYNCDHC--DFSTSHKSNLDRH-IAAKHTG 200

Query: 110 CIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQ 169
             P  + C  C Y   +RS+  RH+RTHTG +PY C +C Y++    DL KH+ +     
Sbjct: 201 EKP--YMCGGCGYRTIYRSHLSRHMRTHTGERPYKCDKCDYSAAQKGDLDKHLVK----- 253

Query: 170 FVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRT------------VGFQCYLCLYITR 217
                          H  ++ F+   C Y  + ++              ++C  C Y T 
Sbjct: 254 ---------------HTGEQPFICGECGYRSAQKSNLSTHMRTHRGDKPYKCDQCGYRTA 298

Query: 218 QSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM-------HFLCHHCNRFGSRDIG 270
             +H+ QH+R HTG +P+ CD C+YSAAQK     H+        + C  C+   +    
Sbjct: 299 WKSHLSQHMRTHTGEKPYKCDQCDYSAAQKSTFDQHVIKHSGEKPYKCDQCDYSAA---- 354

Query: 271 DLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCD 330
                  Q S +    +        Y C  C Y + HK D+ KH+R HTGEKPY+C+ CD
Sbjct: 355 -------QKSTLDNHTVAKHSGEKPYICGECGYRAVHKSDLSKHMRTHTGEKPYKCDQCD 407

Query: 331 YKATQNSSIHFHMK 344
           Y A Q S++  H++
Sbjct: 408 YSAAQKSTLDQHLR 421

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260813384|ref|XP_002601398.1| hypothetical protein BRAFLDRAFT_243940 [Branchiostoma floridae] gi|229286693|gb|EEN57410.1| hypothetical protein BRAFLDRAFT_243940 [Branchiostoma floridae]

 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 164/339 (48%), Gaps = 40/339 (11%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
           Y+C  C Y + HK ++ KH+RKHTGEKPY C  C Y+A   + +  HM+       T E 
Sbjct: 223 YKCDQCEYAAAHKSNLDKHLRKHTGEKPYMCGECGYRAALKAHVSQHMRT-----HTGER 277

Query: 75  VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDT-CIPGWFQCFRCRYSNKFRSNFLRH 133
                 + C  C  D S+A ++ L  H  + +R+T      ++C +C YS   +S   +H
Sbjct: 278 P-----YKCDQC--DYSAAQKSTLDRHLAKHTRETHTGEKPYKCDKCVYSAAQKSTLDQH 330

Query: 134 IRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLL 193
           +  HTG KPY C ECGY++   + L +H+ RIH  +       C +       L +   +
Sbjct: 331 VIKHTGEKPYMCGECGYSTAKKSHLTEHV-RIHTGEKPYKCDRCDYSAATKTALKQHVAI 389

Query: 194 KHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMH 253
            H    P      + C  C Y T Q +H+ +H+RKHTG +P+ CD C+Y+AAQK  L  H
Sbjct: 390 -HTGEKP------YMCGECGYRTAQKSHLSKHMRKHTGEKPYKCDQCDYAAAQKGTLDQH 442

Query: 254 M-------HFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSR 306
           +        ++C  C  + + +   L  H           +        Y+C  C Y + 
Sbjct: 443 LMKHSGEKPYMCGECG-YRTANKSHLSRH-----------MRTHTGEKPYKCDQCDYSAA 490

Query: 307 HKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
           HK  +  H  +HTG+KPY C  C Y+A Q S +  HM++
Sbjct: 491 HKHHLDHHCTRHTGDKPYMCGECGYRAAQKSDLSKHMRI 529

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	353
UNIPROTKB|G3MXI0	483	ZNF774 "Uncharacterized protei	0.844	0.616	0.325	4.6e-34
UNIPROTKB|F1PJ04	627	ZNF8 "Uncharacterized protein"	0.849	0.478	0.315	4.8e-34
UNIPROTKB|Q8N9M3	616	ZNF135 "Zinc finger protein 13	0.849	0.487	0.318	5.6e-34
UNIPROTKB|P52742	658	ZNF135 "Zinc finger protein 13	0.849	0.455	0.318	7.8e-34
UNIPROTKB|E9PEV2	670	ZNF135 "Zinc finger protein 13	0.849	0.447	0.318	8.4e-34
UNIPROTKB|H0Y3I8	676	ZNF135 "Zinc finger protein 13	0.849	0.443	0.318	8.7e-34
UNIPROTKB|F5GYY9	682	ZNF135 "Zinc finger protein 13	0.849	0.439	0.318	9e-34
UNIPROTKB|F1LYQ2	507	Zfp37 "Zinc finger protein 37"	0.895	0.623	0.289	1.1e-33
UNIPROTKB|I3LEB8	655	ZNF135 "Uncharacterized protei	0.849	0.458	0.321	2.1e-33
UNIPROTKB|G3V8H6	787	Znf606 "RCG27439" [Rattus norv	0.895	0.401	0.301	3.2e-33

UNIPROTKB|G3MXI0 ZNF774 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 107/329 (32%), Positives = 139/329 (42%)

Query:    15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
             Y+C  C    +   D+  H R HTGEKPY+C+ C+ K + +S++  H     Q   T E 
Sbjct:   179 YKCMECGKGFKQSSDLVTHRRTHTGEKPYQCHRCEKKFSDSSTLIKH-----QRTHTGER 233

Query:    75 VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHI 134
                   H C  C G  + A +  L  H  Q +     P  + C +C  S    SNF+ H 
Sbjct:   234 P-----HQCPEC-GK-TFARKPHLTVH--QRTHTGEKP--YMCLQCHKSFSRSSNFITHQ 282

Query:   135 RTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLK 194
             RTHTG KPY C +CG +   S+DL KH +R H     E    C  C K     D S  + 
Sbjct:   283 RTHTGVKPYGCLDCGESFSQSSDLIKH-QRTHTG---ERPFKCPECGKGFR--DSSHFVA 336

Query:   195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
             H       R   F C  C     QS+H+  H R HTG RPF CD C    A    L  H 
Sbjct:   337 HMSTHSGERP--FSCPYCHKSFSQSSHLVTHQRTHTGERPFKCDGCGKGFADSSALVKHQ 394

Query:   255 HFLCHHCNR-FGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKK 313
                 H   R +   + G     S+        +L DR     YRC  C      +     
Sbjct:   395 RI--HTGERPYKCGECGKSFNQSSHFITHQRIHLGDRP----YRCPECGKTFNQRSHFLT 448

Query:   314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
             H R HTGEKP+ C+ CD    Q + +  H
Sbjct:   449 HQRTHTGEKPFHCSECDKSFRQKAHLLCH 477

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1PJ04 ZNF8 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 375 (137.1 bits), Expect = 4.8e-34, P = 4.8e-34
 Identities = 105/333 (31%), Positives = 150/333 (45%)

Query:    15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSS-IHFHMKVGVQAIFTSE 73
             Y+C  C     H   + +H R HTGE+PYEC+ C  K  +NSS +  H     Q I T E
Sbjct:   183 YKCQACGKAFSHSSALTEHNRTHTGERPYECHECG-KGFRNSSALTKH-----QRIHTGE 236

Query:    74 NVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRH 133
                    + C  C    +      L+ H  Q +     P  ++C  C  S  FRS+F +H
Sbjct:   237 KP-----YKCTQCGKTFNQIAP--LIQH--QRTHTGEKP--YECSECGKSFSFRSSFSQH 285

Query:   134 IRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLL 193
              RTHTG KPY C+ECG A   S  L +H+ RIH     E    C  C K   +   S L 
Sbjct:   286 ERTHTGEKPYECSECGKAFRQSIHLTQHL-RIHTG---EKPYQCGECGKAFSH--SSSLT 339

Query:   194 KHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMH 253
             KH +     +   ++C+ C     Q   + QH R HTG +P+ C+ C  + +Q   L  H
Sbjct:   340 KHWRIHTGEKP--YECHECGKAFTQITPLIQHQRTHTGEKPYECNECGKAFSQSTLLTEH 397

Query:   254 MHFLCHHCNR-FGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVK 312
                  H   + +G  + G    HS+  S     +  ++     Y C  C    R    + 
Sbjct:   398 RRI--HTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKP----YECGQCGKAFRQSTHLT 451

Query:   313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
             +H R HTGEKPYEC+ C    + +SS+  H ++
Sbjct:   452 QHQRIHTGEKPYECSDCGKAFSHSSSLTKHQRI 484

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q8N9M3 ZNF135 "Zinc finger protein 135" [Homo sapiens (taxid:9606)]

 Score = 374 (136.7 bits), Expect = 5.6e-34, P = 5.6e-34
 Identities = 106/333 (31%), Positives = 149/333 (44%)

Query:    15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSS-IHFHMKVGVQAIFTSE 73
             Y+C  C     H   + +H R HTGE+PYEC+ C  K  +NSS +  H     Q I T E
Sbjct:   172 YKCQECGKAFSHSSALIEHHRTHTGERPYECHEC-LKGFRNSSALTKH-----QRIHTGE 225

Query:    74 NVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRH 133
                    + C  C    +      L+ H  Q +     P  ++C  C  S  FRS+F +H
Sbjct:   226 KP-----YKCTQCGRTFNQIAP--LIQH--QRTHTGEKP--YECSECGKSFSFRSSFSQH 274

Query:   134 IRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLL 193
              RTHTG KPY C+ECG A   S  L +H+ RIH     E    C  C K   +   S L 
Sbjct:   275 ERTHTGEKPYECSECGKAFRQSIHLTQHL-RIHTG---EKPYQCGECGKAFSH--SSSLT 328

Query:   194 KHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMH 253
             KH +     +   ++C+ C     Q   + QH R HTG +P+ C  C  + +Q   L  H
Sbjct:   329 KHQRIHTGEKP--YECHECGKAFTQITPLIQHQRTHTGEKPYECGECGKAFSQSTLLTEH 386

Query:   254 MHFLCHHCNR-FGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVK 312
                  H   + +G  + G    HS+  S     +  ++     Y C  C    R    + 
Sbjct:   387 RRI--HTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKP----YECSQCGKAFRQSTHLT 440

Query:   313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
             +H R HTGEKPYECN C    + +SS+  H ++
Sbjct:   441 QHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRI 473

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|P52742 ZNF135 "Zinc finger protein 135" [Homo sapiens (taxid:9606)]

 Score = 374 (136.7 bits), Expect = 7.8e-34, P = 7.8e-34
 Identities = 106/333 (31%), Positives = 149/333 (44%)

Query:    15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSS-IHFHMKVGVQAIFTSE 73
             Y+C  C     H   + +H R HTGE+PYEC+ C  K  +NSS +  H     Q I T E
Sbjct:   214 YKCQECGKAFSHSSALIEHHRTHTGERPYECHEC-LKGFRNSSALTKH-----QRIHTGE 267

Query:    74 NVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRH 133
                    + C  C    +      L+ H  Q +     P  ++C  C  S  FRS+F +H
Sbjct:   268 KP-----YKCTQCGRTFNQIAP--LIQH--QRTHTGEKP--YECSECGKSFSFRSSFSQH 316

Query:   134 IRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLL 193
              RTHTG KPY C+ECG A   S  L +H+ RIH     E    C  C K   +   S L 
Sbjct:   317 ERTHTGEKPYECSECGKAFRQSIHLTQHL-RIHTG---EKPYQCGECGKAFSH--SSSLT 370

Query:   194 KHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMH 253
             KH +     +   ++C+ C     Q   + QH R HTG +P+ C  C  + +Q   L  H
Sbjct:   371 KHQRIHTGEKP--YECHECGKAFTQITPLIQHQRTHTGEKPYECGECGKAFSQSTLLTEH 428

Query:   254 MHFLCHHCNR-FGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVK 312
                  H   + +G  + G    HS+  S     +  ++     Y C  C    R    + 
Sbjct:   429 RRI--HTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKP----YECSQCGKAFRQSTHLT 482

Query:   313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
             +H R HTGEKPYECN C    + +SS+  H ++
Sbjct:   483 QHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRI 515

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS

GO:0005634 "nucleus" evidence=NAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=NAS

GO:0007010 "cytoskeleton organization" evidence=IMP

GO:0022604 "regulation of cell morphogenesis" evidence=IMP

UNIPROTKB|E9PEV2 ZNF135 "Zinc finger protein 135" [Homo sapiens (taxid:9606)]

 Score = 374 (136.7 bits), Expect = 8.4e-34, P = 8.4e-34
 Identities = 106/333 (31%), Positives = 149/333 (44%)

Query:    15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSS-IHFHMKVGVQAIFTSE 73
             Y+C  C     H   + +H R HTGE+PYEC+ C  K  +NSS +  H     Q I T E
Sbjct:   226 YKCQECGKAFSHSSALIEHHRTHTGERPYECHEC-LKGFRNSSALTKH-----QRIHTGE 279

Query:    74 NVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRH 133
                    + C  C    +      L+ H  Q +     P  ++C  C  S  FRS+F +H
Sbjct:   280 KP-----YKCTQCGRTFNQIAP--LIQH--QRTHTGEKP--YECSECGKSFSFRSSFSQH 328

Query:   134 IRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLL 193
              RTHTG KPY C+ECG A   S  L +H+ RIH     E    C  C K   +   S L 
Sbjct:   329 ERTHTGEKPYECSECGKAFRQSIHLTQHL-RIHTG---EKPYQCGECGKAFSH--SSSLT 382

Query:   194 KHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMH 253
             KH +     +   ++C+ C     Q   + QH R HTG +P+ C  C  + +Q   L  H
Sbjct:   383 KHQRIHTGEKP--YECHECGKAFTQITPLIQHQRTHTGEKPYECGECGKAFSQSTLLTEH 440

Query:   254 MHFLCHHCNR-FGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVK 312
                  H   + +G  + G    HS+  S     +  ++     Y C  C    R    + 
Sbjct:   441 RRI--HTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKP----YECSQCGKAFRQSTHLT 494

Query:   313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
             +H R HTGEKPYECN C    + +SS+  H ++
Sbjct:   495 QHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRI 527

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|H0Y3I8 ZNF135 "Zinc finger protein 135" [Homo sapiens (taxid:9606)]

 Score = 374 (136.7 bits), Expect = 8.7e-34, P = 8.7e-34
 Identities = 106/333 (31%), Positives = 149/333 (44%)

Query:    15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSS-IHFHMKVGVQAIFTSE 73
             Y+C  C     H   + +H R HTGE+PYEC+ C  K  +NSS +  H     Q I T E
Sbjct:   232 YKCQECGKAFSHSSALIEHHRTHTGERPYECHEC-LKGFRNSSALTKH-----QRIHTGE 285

Query:    74 NVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRH 133
                    + C  C    +      L+ H  Q +     P  ++C  C  S  FRS+F +H
Sbjct:   286 KP-----YKCTQCGRTFNQIAP--LIQH--QRTHTGEKP--YECSECGKSFSFRSSFSQH 334

Query:   134 IRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLL 193
              RTHTG KPY C+ECG A   S  L +H+ RIH     E    C  C K   +   S L 
Sbjct:   335 ERTHTGEKPYECSECGKAFRQSIHLTQHL-RIHTG---EKPYQCGECGKAFSH--SSSLT 388

Query:   194 KHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMH 253
             KH +     +   ++C+ C     Q   + QH R HTG +P+ C  C  + +Q   L  H
Sbjct:   389 KHQRIHTGEKP--YECHECGKAFTQITPLIQHQRTHTGEKPYECGECGKAFSQSTLLTEH 446

Query:   254 MHFLCHHCNR-FGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVK 312
                  H   + +G  + G    HS+  S     +  ++     Y C  C    R    + 
Sbjct:   447 RRI--HTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKP----YECSQCGKAFRQSTHLT 500

Query:   313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
             +H R HTGEKPYECN C    + +SS+  H ++
Sbjct:   501 QHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRI 533

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F5GYY9 ZNF135 "Zinc finger protein 135" [Homo sapiens (taxid:9606)]

 Score = 374 (136.7 bits), Expect = 9.0e-34, P = 9.0e-34
 Identities = 106/333 (31%), Positives = 149/333 (44%)

Query:    15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSS-IHFHMKVGVQAIFTSE 73
             Y+C  C     H   + +H R HTGE+PYEC+ C  K  +NSS +  H     Q I T E
Sbjct:   238 YKCQECGKAFSHSSALIEHHRTHTGERPYECHEC-LKGFRNSSALTKH-----QRIHTGE 291

Query:    74 NVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRH 133
                    + C  C    +      L+ H  Q +     P  ++C  C  S  FRS+F +H
Sbjct:   292 KP-----YKCTQCGRTFNQIAP--LIQH--QRTHTGEKP--YECSECGKSFSFRSSFSQH 340

Query:   134 IRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLL 193
              RTHTG KPY C+ECG A   S  L +H+ RIH     E    C  C K   +   S L 
Sbjct:   341 ERTHTGEKPYECSECGKAFRQSIHLTQHL-RIHTG---EKPYQCGECGKAFSH--SSSLT 394

Query:   194 KHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMH 253
             KH +     +   ++C+ C     Q   + QH R HTG +P+ C  C  + +Q   L  H
Sbjct:   395 KHQRIHTGEKP--YECHECGKAFTQITPLIQHQRTHTGEKPYECGECGKAFSQSTLLTEH 452

Query:   254 MHFLCHHCNR-FGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVK 312
                  H   + +G  + G    HS+  S     +  ++     Y C  C    R    + 
Sbjct:   453 RRI--HTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKP----YECSQCGKAFRQSTHLT 506

Query:   313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
             +H R HTGEKPYECN C    + +SS+  H ++
Sbjct:   507 QHQRIHTGEKPYECNDCGKAFSHSSSLTKHQRI 539

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1LYQ2 Zfp37 "Zinc finger protein 37" [Rattus norvegicus (taxid:10116)]

 Score = 340 (124.7 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
 Identities = 100/345 (28%), Positives = 140/345 (40%)

Query:    15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
             Y C  C  +  HK  +  H R HTGEKPYECN C    +Q S +  H +         E 
Sbjct:   168 YECNQCGKVLSHKQGLLDHQRTHTGEKPYECNECGIAFSQKSHLVVHQRTHTGEK-PYEC 226

Query:    75 VVLSGLHSCVHCYGD---LSSATETELLDHC----------MQCSRDTCIPGWFQCFRCR 121
             V     H   H   D   + +  +    + C          MQ  R       ++C  C 
Sbjct:   227 VQCGKAHGHKHALTDHLRIHTGEKPYKCNECGKTFRHSSNLMQHIRSHTGEKPYECKECG 286

Query:   122 YSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCN 181
              S ++ S+   H+RTHTG  PY C ECG A    + L KH+ RIH     E    C  C 
Sbjct:   287 KSFRYNSSLTEHVRTHTGEIPYECNECGKAFKYGSSLTKHM-RIHTG---EKPFECTECG 342

Query:   182 KEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCE 241
             K      +S L+ H +     +   ++C  C      S+ +  HLR HTG  PF C+ C 
Sbjct:   343 KTFSK--KSHLVIHQR--THTKEKPYKCKECGKAFGHSSSLTYHLRTHTGDCPFECNQCG 398

Query:   242 YSAAQKWNLKMHMHFLCHHCNR-FGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFV 300
              +  Q   L  H     H   + +   + G      +   V    +  ++     + C+ 
Sbjct:   399 KAFKQIEGLTQHQRV--HTGEKPYECVECGKAFSQKSHLIVHQRTHTGEKP----FECYE 452

Query:   301 CPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
             C      K  +  H R HTGEKPYEC  C     QN+S+  HMK+
Sbjct:   453 CGKAFNAKSQLVIHQRSHTGEKPYECVECGKAFKQNASLTRHMKI 497

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|I3LEB8 ZNF135 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 370 (135.3 bits), Expect = 2.1e-33, P = 2.1e-33
 Identities = 107/333 (32%), Positives = 148/333 (44%)

Query:    15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSS-IHFHMKVGVQAIFTSE 73
             Y+C  C     H   + +H R HTGE+PYEC+ C  K  +NSS +  H     Q I T E
Sbjct:   211 YKCQECGKAFSHSSALIEHHRTHTGERPYECHECG-KGFRNSSALSKH-----QRIHTGE 264

Query:    74 NVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRH 133
                    + C  C G   + T   L  H  Q +     P  ++C  C  S  FRS+F +H
Sbjct:   265 KP-----YKCTQC-GRTFNQT-APLTQH--QRTHTGEKP--YKCSECGKSFSFRSSFSQH 313

Query:   134 IRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLL 193
              RTHTG KPY C++CG A   S  L +H+ RIH     E    C  C K   +   S L 
Sbjct:   314 ERTHTGEKPYTCSQCGKAFRQSIHLTQHL-RIHTG---EKPYQCGECGKAFSH--SSSLT 367

Query:   194 KHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMH 253
             KH +     +   ++C  C     Q   + QH R HTG RP+ C  C  + +Q   L  H
Sbjct:   368 KHQRIHTGEKP--YECQACGKAFTQITPLIQHQRTHTGERPYECSECGKAFSQSTLLTEH 425

Query:   254 MHFLCHHCNR-FGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVK 312
                  H   + +G  + G    HS+  S     +  ++     Y C  C    R    + 
Sbjct:   426 RRI--HTGEKPYGCNECGKTFSHSSSLSQHERTHTGEKP----YACSQCGKAFRQSTHLT 479

Query:   313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
             +H R HTGEKPYEC  C    + +SS+  H ++
Sbjct:   480 QHQRIHTGEKPYECGDCGKAFSHSSSLTKHQRI 512

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|G3V8H6 Znf606 "RCG27439" [Rattus norvegicus (taxid:10116)]

 Score = 354 (129.7 bits), Expect = 3.2e-33, Sum P(2) = 3.2e-33
 Identities = 104/345 (30%), Positives = 147/345 (42%)

Query:    15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV--GVQAIFTS 72
             Y C  C  + R++  + KH R HTG KPYECN C    + NS +  H ++  G +    +
Sbjct:   424 YECDKCRKVFRNRSALTKHERTHTGIKPYECNKCGKAFSWNSHLIVHTRIHTGEKPYVCN 483

Query:    73 E-------NVVLSGLHSCVHCYGDLSSATET----ELLDHCMQCSRDTCIPGWFQCFRCR 121
             E       N  L G H   H        TE         H +   R       F+C  C 
Sbjct:   484 ECGKSFNWNSHLIG-HQRTHTGEKPFECTECGKSFSWSSHLIAHMRMHTGEKPFKCDECE 542

Query:   122 YSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCN 181
              + +  S   +H RTH+G KPY CTECG +   S+ L  H +R H     E   +C  C 
Sbjct:   543 KAFRDYSALSKHERTHSGAKPYKCTECGKSFSWSSHLIAH-QRTHTG---EKPYNCQECG 598

Query:   182 KEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCE 241
             K     + S L KH      ++   ++C  C     Q AH+ +H R HTG +P+ C+ C 
Sbjct:   599 KAFR--ERSALTKHEIIHSGIKP--YECNKCGKSCSQMAHLVRHQRTHTGEKPYECNKCG 654

Query:   242 YSAAQKWNLKMHMHFLCHHCNRFGSRDIG-DLIEHSTQCSVMGIAYLNDRRNVIMYRCFV 300
              S +Q        H + H     G +    +  E S  CS   IA+         YRC  
Sbjct:   655 KSFSQS------CHLVAHRRIHTGEKPYKCNQCERSFNCSSHLIAHRRTHTGEKPYRCNE 708

Query:   301 CPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
             C         +  H+R HTGEKPY+C  C+    +NSS+  H ++
Sbjct:   709 CGKAFNESSSLIVHLRNHTGEKPYKCIHCEKAFCKNSSLIIHQRM 753

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	353
KOG1074|consensus	958		99.96
KOG2462|consensus	279		99.93
KOG3608|consensus	467		99.92
KOG3608|consensus	467		99.91
KOG3623|consensus	1007		99.9
KOG2462|consensus	279		99.89
KOG1074|consensus	958		99.89
KOG3623|consensus	1007		99.85
KOG3576|consensus	267		99.57
KOG3576|consensus	267		99.55
PHA00733	128	hypothetical protein	99.23
PLN03086	567	PRLI-interacting factor K; Provisional	99.2
KOG3993|consensus	500		99.16
PLN03086	567	PRLI-interacting factor K; Provisional	99.05
PHA02768	55	hypothetical protein; Provisional	98.97
PHA00733	128	hypothetical protein	98.9
PHA02768	55	hypothetical protein; Provisional	98.74
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.69
KOG3993|consensus	500		98.53
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.47
PHA00616	44	hypothetical protein	98.47
PHA00732	79	hypothetical protein	98.4
PHA00616	44	hypothetical protein	98.35
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.27
PHA00732	79	hypothetical protein	98.07
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.93
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.89
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.85
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.76
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.7
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.68
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.61
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.6
KOG1146|consensus	1406		97.52
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.43
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.32
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.2
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.14
smart00355	26	ZnF_C2H2 zinc finger.	96.95
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.94
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.9
smart00355	26	ZnF_C2H2 zinc finger.	96.78
PRK04860	160	hypothetical protein; Provisional	96.62
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.61
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.56
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.56
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.21
KOG2785|consensus	390		96.12
PRK04860	160	hypothetical protein; Provisional	96.1
KOG2231|consensus	669		95.88
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.61
KOG2231|consensus	669		95.35
KOG1146|consensus	1406		95.09
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.2
KOG2482|consensus	423		93.97
KOG2482|consensus	423		93.85
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.84
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.83
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	93.73
COG5236	493	Uncharacterized conserved protein, contains RING Z	93.27
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.04
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	92.56
KOG2785|consensus	390		92.29
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	91.15
COG5048	467	FOG: Zn-finger [General function prediction only]	90.47
KOG4173|consensus	253		90.09
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	90.09
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	90.08
KOG2893|consensus	341		89.98
COG5236	493	Uncharacterized conserved protein, contains RING Z	89.95
COG4049	65	Uncharacterized protein containing archaeal-type C	89.71
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	88.99
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	88.55
COG5048	467	FOG: Zn-finger [General function prediction only]	88.3
COG4049	65	Uncharacterized protein containing archaeal-type C	86.94
KOG2893|consensus	341		86.54
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	86.32
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	84.18
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	83.16
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	82.93
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	82.78
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	82.62
PHA00626	59	hypothetical protein	81.09
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	80.53
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	80.49
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	80.46
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	80.14

>KOG1074|consensus

Probab=99.96  E-value=9.6e-31  Score=236.42  Aligned_cols=238  Identities=21%  Similarity=0.301  Sum_probs=165.1

Q ss_pred             CCceecCCCCccCCCchhHHHHHhhhcCCCCccCCCCCccccChHHHHHHHHHhcCCccc-cCcccCc---ccccccccc
Q psy1798         112 PGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFV-EDVRHCV---HCNKEMHNL  187 (353)
Q Consensus       112 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~-~~~~~c~---~c~~~~~~~  187 (353)
                      ..+..|-+|.++..-++.|..|.++|++++||+|.+||+.|.++.+|+.| ..+|..... .-.+.|+   +|.+.|.+ 
T Consensus       603 TdPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH-~~vHka~p~~R~q~ScP~~~ic~~kftn-  680 (958)
T KOG1074|consen  603 TDPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAH-MSVHKAKPPARVQFSCPSTFICQKKFTN-  680 (958)
T ss_pred             CCccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhc-ccccccCccccccccCCchhhhcccccc-
Confidence            56799999999999999999999999999999999999999999999999 577754322 2467899   99999998 


Q ss_pred             chHHHHHhhhcCCCC-----------CCcccccccchhhccCHHHHHHHHHhhh----------------CCC----CcC
Q psy1798         188 DESFLLKHCKYCPSL-----------RTVGFQCYLCLYITRQSAHMRQHLRKHT----------------GRR----PFP  236 (353)
Q Consensus       188 ~~~~l~~h~~~~~~~-----------~~~~~~C~~C~~~f~~~~~l~~H~~~h~----------------~~~----~~~  236 (353)
                       ...|.+|++.|.+.           ....-+|..|.+.|...-.+..++..|.                ++.    +..
T Consensus       681 -~V~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~  759 (958)
T KOG1074|consen  681 -AVTLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPP  759 (958)
T ss_pred             -cccccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCcc
Confidence             88999998887621           1122579999999977777776766552                222    355


Q ss_pred             CCCCCccccchhHHHHhh------------------------------hh-ccccCCCCcCCCCcc---ccccccc----
Q psy1798         237 CDMCEYSAAQKWNLKMHM------------------------------HF-LCHHCNRFGSRDIGD---LIEHSTQ----  278 (353)
Q Consensus       237 C~~C~~~f~~~~~l~~H~------------------------------~~-~C~~C~~~~~~~~~~---l~~h~~~----  278 (353)
                      +..|+..+.....+..+-                              +. .+..++..-....-.   |......    
T Consensus       760 e~~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~e  839 (958)
T KOG1074|consen  760 ENSCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNE  839 (958)
T ss_pred             ccccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccccc
Confidence            666776665544332221                              11 222222211111100   0000000    


Q ss_pred             cccccc-----------hhccc----------CCCc--ceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccC
Q psy1798         279 CSVMGI-----------AYLND----------RRNV--IMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQ  335 (353)
Q Consensus       279 ~~~~~~-----------~~~~~----------~~~~--~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  335 (353)
                      ....+.           .++..          ....  ....|.+||+.|...++|+.|+++|++++||.|.+|++.|+.
T Consensus       840 g~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFtt  919 (958)
T KOG1074|consen  840 GLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTT  919 (958)
T ss_pred             ccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhh
Confidence            000000           00000          0000  126799999999999999999999999999999999999999


Q ss_pred             chHHHHHHhhhcCCCCC
Q psy1798         336 NSSIHFHMKLKHNMPFI  352 (353)
Q Consensus       336 ~~~l~~H~~~~h~~~~~  352 (353)
                      +.+|.+||.+|+.+.|+
T Consensus       920 rgnLKvHMgtH~w~q~~  936 (958)
T KOG1074|consen  920 RGNLKVHMGTHMWVQPP  936 (958)
T ss_pred             hhhhhhhhccccccCCC
Confidence            99999999999887664

>KOG2462|consensus

Probab=99.93  E-value=2.8e-26  Score=183.71  Aligned_cols=136  Identities=23%  Similarity=0.499  Sum_probs=113.7

Q ss_pred             CCccCCCCCccccChHHHHHHHHHhcCCccccCcccCccccccccccchHHHHHhhhcCCCCCCcccccccchhhccCHH
Q psy1798         141 KPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSA  220 (353)
Q Consensus       141 ~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~c~~c~~~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~  220 (353)
                      ..|+|++||+.+.+.++|.+| ++.|-..+.                                .+.+.|..|++.|.+-.
T Consensus       129 ~r~~c~eCgk~ysT~snLsrH-kQ~H~~~~s--------------------------------~ka~~C~~C~K~YvSmp  175 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRH-KQTHRSLDS--------------------------------KKAFSCKYCGKVYVSMP  175 (279)
T ss_pred             Cceeccccccccccccccchh-hcccccccc--------------------------------cccccCCCCCceeeehH
Confidence            348888888888888888888 777755322                                45577888888888888


Q ss_pred             HHHHHHHhhhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCcceeeCCC
Q psy1798         221 HMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFV  300 (353)
Q Consensus       221 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~  300 (353)
                      .|+.|+++|+  -+.+|.+|||.|..+|.|+.|++                                 .|++|+||.|+.
T Consensus       176 ALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiR---------------------------------THTGEKPF~C~h  220 (279)
T KOG2462|consen  176 ALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIR---------------------------------THTGEKPFSCPH  220 (279)
T ss_pred             HHhhHhhccC--CCcccccccccccchHHhhcccc---------------------------------cccCCCCccCCc
Confidence            8899998886  57889999999999888888863                                 289999999999


Q ss_pred             CCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHh
Q psy1798         301 CPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK  344 (353)
Q Consensus       301 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  344 (353)
                      |+++|.+.++|..||++|.+.++|.|+.|+|.|...+-|..|..
T Consensus       221 C~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  221 CGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             ccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999998888865

>KOG3608|consensus

Probab=99.92  E-value=2.3e-25  Score=183.01  Aligned_cols=195  Identities=26%  Similarity=0.507  Sum_probs=171.5

Q ss_pred             eec--CCCCccCCCchhHHHHHhhhcCCCCccCCCCCccccChHHHHHHHHHhcCCccccCcccCccccccccccchHHH
Q psy1798         115 FQC--FRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFL  192 (353)
Q Consensus       115 ~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~c~~c~~~~~~~~~~~l  192 (353)
                      +.|  .-|.+.+.++..|++|++.|.+++...|+.||..|.++..|..|+++.-.  ....+|+|..|.+.|..  +..|
T Consensus       178 ~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~--l~~n~fqC~~C~KrFaT--eklL  253 (467)
T KOG3608|consen  178 TMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTE--LNTNSFQCAQCFKRFAT--EKLL  253 (467)
T ss_pred             eeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhh--hcCCchHHHHHHHHHhH--HHHH
Confidence            455  45999999999999999999999999999999999999999999654432  22569999999999999  9999


Q ss_pred             HHhhhcCCCCCCcccccccchhhccCHHHHHHHHHh-hhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCcc
Q psy1798         193 LKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRK-HTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGD  271 (353)
Q Consensus       193 ~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~  271 (353)
                      ..|...|.    .-|+|+.|..+....+.|..|++. |...+||+|..|++.|...+.|.+|+.+               
T Consensus       254 ~~Hv~rHv----n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~---------------  314 (467)
T KOG3608|consen  254 KSHVVRHV----NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQV---------------  314 (467)
T ss_pred             HHHHHHhh----hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHh---------------
Confidence            99998884    469999999999999999999985 7788999999999999999999999732               


Q ss_pred             ccccccccccccchhcccCCCcceeeCCC--CCCccCCcchHHHHHHHhc-C--CCCccCCCCcccccCchHHHHHHhhh
Q psy1798         272 LIEHSTQCSVMGIAYLNDRRNVIMYRCFV--CPYLSRHKGDVKKHVRKHT-G--EKPYECNLCDYKATQNSSIHFHMKLK  346 (353)
Q Consensus       272 l~~h~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~-~--~~~~~C~~C~~~f~~~~~l~~H~~~~  346 (353)
                                        |. +..|.|..  |.++|.+...|.+|++.++ |  ..+|.|-+|++.|++..+|.+|+...
T Consensus       315 ------------------HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kk  375 (467)
T KOG3608|consen  315 ------------------HS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKK  375 (467)
T ss_pred             ------------------cc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHh
Confidence                              44 45699988  9999999999999998554 4  45699999999999999999999998


Q ss_pred             cCCCC
Q psy1798         347 HNMPF  351 (353)
Q Consensus       347 h~~~~  351 (353)
                      |+.+.
T Consensus       376 H~f~~  380 (467)
T KOG3608|consen  376 HGFRL  380 (467)
T ss_pred             hcccC
Confidence            88653

>KOG3608|consensus

Probab=99.91  E-value=4e-24  Score=175.74  Aligned_cols=198  Identities=24%  Similarity=0.476  Sum_probs=177.2

Q ss_pred             eec--CCCCccCCCchhHHHHHhhhcC------------CCC-ccCC--CCCccccChHHHHHHHHHhcCCccccCcccC
Q psy1798         115 FQC--FRCRYSNKFRSNFLRHIRTHTG------------HKP-YACT--ECGYASILSTDLRKHIERIHMPQFVEDVRHC  177 (353)
Q Consensus       115 ~~C--~~C~~~f~~~~~l~~H~~~h~~------------~~~-~~C~--~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~c  177 (353)
                      |.|  +.|+..|.+...|..|.-.|..            ++| +.|.  .|-..+.+++.|+.| .+.|..   ++...|
T Consensus       135 f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH-~r~Hs~---eKvvAC  210 (467)
T KOG3608|consen  135 FRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREH-IRTHSN---EKVVAC  210 (467)
T ss_pred             hccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHH-HHhcCC---CeEEec
Confidence            666  5799999999999999887742            222 4554  488999999999999 789988   999999


Q ss_pred             ccccccccccchHHHHHhhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCccccchhHHHHhhhhc
Q psy1798         178 VHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFL  257 (353)
Q Consensus       178 ~~c~~~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  257 (353)
                      +.||..|.+  ...|..|++..+.....+|+|..|.+.|.+...|..|+..|.  .-|+|+.|+.....+++|..|+.|+
T Consensus       211 p~Cg~~F~~--~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~r  286 (467)
T KOG3608|consen  211 PHCGELFRT--KTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYR  286 (467)
T ss_pred             chHHHHhcc--ccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhh
Confidence            999999999  999999999998888899999999999999999999999996  5799999999999999999999763


Q ss_pred             cccCCCCcCCCCccccccccccccccchhcccCCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC--CcccccC
Q psy1798         258 CHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL--CDYKATQ  335 (353)
Q Consensus       258 C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~  335 (353)
                                                      |..++||+|..|...|.+.+.|.+|+.+|. +..|.|..  |.++|.+
T Consensus       287 --------------------------------Hs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~  333 (467)
T KOG3608|consen  287 --------------------------------HSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRT  333 (467)
T ss_pred             --------------------------------hccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHH
Confidence                                            777899999999999999999999999988 67899976  9999999


Q ss_pred             chHHHHHHhhhc-CCCCCC
Q psy1798         336 NSSIHFHMKLKH-NMPFIP  353 (353)
Q Consensus       336 ~~~l~~H~~~~h-~~~~~~  353 (353)
                      ..++.+|++.+| |..|.|
T Consensus       334 ~~q~~~H~~evhEg~np~~  352 (467)
T KOG3608|consen  334 YTQMRRHFLEVHEGNNPIL  352 (467)
T ss_pred             HHHHHHHHHHhccCCCCCc
Confidence            999999999999 666653

>KOG3623|consensus

Probab=99.90  E-value=8.8e-25  Score=194.96  Aligned_cols=120  Identities=24%  Similarity=0.488  Sum_probs=96.1

Q ss_pred             ceeecCCCCCccCchhhhhhHhhhhcC--CCCcccCCCCcccccchhhhhhhhcccccccccccccccCccccccccCCC
Q psy1798          13 IMYRCFVCPYLSRHKGDVKKHVRKHTG--EKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDL   90 (353)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~c~~c~~~~   90 (353)
                      ....|+.|++.+.....|+.|++-.+.  +-.|.|.+|.++|.++..|.+||..|...-....                 
T Consensus       209 qlltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~-----------------  271 (1007)
T KOG3623|consen  209 QLLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAI-----------------  271 (1007)
T ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccc-----------------
Confidence            446899999999999999999875433  2349999999999999999999988543321110                 


Q ss_pred             cccchhHHHHHHhhcCCCCcCCCceecCCCCccCCCchhHHHHHhhhcCCCCccCCCCCccccChHHHHHHHH
Q psy1798          91 SSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIE  163 (353)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  163 (353)
                       ..+....             -..|+|.+|++.|.-+-.|.+|+++|.|++||.|+-|++.|........||.
T Consensus       272 -sltqsa~-------------lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  272 -SLTQSAL-------------LRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             -cccchhh-------------hccccccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence             0000000             1239999999999999999999999999999999999999999999999963

>KOG2462|consensus

Probab=99.89  E-value=1.2e-23  Score=168.64  Aligned_cols=141  Identities=26%  Similarity=0.428  Sum_probs=129.2

Q ss_pred             CCceecCCCCccCCCchhHHHHHhhhcC---CCCccCCCCCccccChHHHHHHHHHhcCCccccCcccCccccccccccc
Q psy1798         112 PGWFQCFRCRYSNKFRSNFLRHIRTHTG---HKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLD  188 (353)
Q Consensus       112 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~c~~c~~~~~~~~  188 (353)
                      ...|.|..|++.|.+.++|.+|.+.|..   .+.+.|+.|++.|.....|..| .+.|     .-+.+|++|||.|+.  
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMH-irTH-----~l~c~C~iCGKaFSR--  199 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMH-IRTH-----TLPCECGICGKAFSR--  199 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhH-hhcc-----CCCcccccccccccc--
Confidence            4579999999999999999999999864   4569999999999999999999 6778     568999999999997  


Q ss_pred             hHHHHHhhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCccccchhHHHHhhhhccccCC
Q psy1798         189 ESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCN  262 (353)
Q Consensus       189 ~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~  262 (353)
                      .=.|+-|++.|.+  ++||.|+.|++.|.++++|+.|+++|.+.++|+|..|+|.|...+-|.+|..-.|....
T Consensus       200 PWLLQGHiRTHTG--EKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~C~~~~  271 (279)
T KOG2462|consen  200 PWLLQGHIRTHTG--EKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSESACLKYL  271 (279)
T ss_pred             hHHhhcccccccC--CCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhhcccccc
Confidence            7788999999998  99999999999999999999999999999999999999999999999999866665544

>KOG1074|consensus

Probab=99.89  E-value=3.1e-24  Score=194.62  Aligned_cols=115  Identities=25%  Similarity=0.413  Sum_probs=85.0

Q ss_pred             CCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCccccchhHHHHhh-----------hhccc---cCCCCcCCC
Q psy1798         203 RTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM-----------HFLCH---HCNRFGSRD  268 (353)
Q Consensus       203 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-----------~~~C~---~C~~~~~~~  268 (353)
                      ...+-+|-.|.+.+.=++.|+.|.+.|+||+||+|.+||+.|+++.+|+.|+           .+.|.   .|.+.| .+
T Consensus       602 ~TdPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kf-tn  680 (958)
T KOG1074|consen  602 RTDPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKF-TN  680 (958)
T ss_pred             cCCccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccc-cc
Confidence            3345789999999999999999999999999999999999999999999998           57899   999999 78


Q ss_pred             Cccccccccccccc--cchhcccCCCcceeeCCCCCCccCCcchHHHHHHHh
Q psy1798         269 IGDLIEHSTQCSVM--GIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKH  318 (353)
Q Consensus       269 ~~~l~~h~~~~~~~--~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  318 (353)
                      ...|..|++.....  .....-+-.....-+|..|.+.|.+...|..++..|
T Consensus       681 ~V~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~  732 (958)
T KOG1074|consen  681 AVTLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQ  732 (958)
T ss_pred             cccccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhcc
Confidence            88888888863211  111111111122345666666666655555555444

>KOG3623|consensus

Probab=99.85  E-value=8.2e-23  Score=182.50  Aligned_cols=120  Identities=25%  Similarity=0.496  Sum_probs=79.4

Q ss_pred             CCceecCCCCccCCCchhHHHHHhh-hcC-CCCccCCCCCccccChHHHHHHHHHhcCCccccCcccCccccccccccch
Q psy1798         112 PGWFQCFRCRYSNKFRSNFLRHIRT-HTG-HKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDE  189 (353)
Q Consensus       112 ~~~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~c~~c~~~~~~~~~  189 (353)
                      .....|+.|.+.+..-..|..|++. |.. +..|.|..|.++|..+..|.+| ...|..-.           .....   
T Consensus       208 sqlltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErh-m~~hkpg~-----------dqa~s---  272 (1007)
T KOG3623|consen  208 SQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERH-MQLHKPGG-----------DQAIS---  272 (1007)
T ss_pred             hhhhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHH-HHhhcCCC-----------ccccc---
Confidence            3458999999999999999999985 432 3459999999999999999999 56664310           00000   


Q ss_pred             HHHHHhhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCccccchhHHHHhh
Q psy1798         190 SFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM  254 (353)
Q Consensus       190 ~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  254 (353)
                              .-.+...+.|+|+.|++.|..+-+|++|+|+|.|++||.|+.|++.|.....+..||
T Consensus       273 --------ltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHm  329 (1007)
T KOG3623|consen  273 --------LTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHM  329 (1007)
T ss_pred             --------ccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccc
Confidence                    000111234666666666666666666666666666666666666666666666665

>KOG3576|consensus

Probab=99.57  E-value=7.7e-16  Score=117.62  Aligned_cols=115  Identities=23%  Similarity=0.494  Sum_probs=90.2

Q ss_pred             CcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCcccccccccccccc
Q psy1798         204 TVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMG  283 (353)
Q Consensus       204 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~  283 (353)
                      ...|.|.+|++.|.-.--|.+|+.-|...+.|-|..||++|...-.|++|.                      +.     
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~----------------------rt-----  167 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHT----------------------RT-----  167 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhh----------------------cc-----
Confidence            455788888888887777888888887777777777777777776666664                      33     


Q ss_pred             chhcccCCCcceeeCCCCCCccCCcchHHHHHHHhcCC-----------CCccCCCCcccccCchHHHHHHhhhcCCCC
Q psy1798         284 IAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGE-----------KPYECNLCDYKATQNSSIHFHMKLKHNMPF  351 (353)
Q Consensus       284 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  351 (353)
                            |++.+||+|..|+++|++.-+|..|++.-++.           +.|.|..||+.......+..|++.||...|
T Consensus       168 ------htgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  168 ------HTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             ------ccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence                  88888899999999998888888888644442           558899999888888888899888887654

>KOG3576|consensus

Probab=99.55  E-value=2.4e-15  Score=114.93  Aligned_cols=124  Identities=25%  Similarity=0.449  Sum_probs=92.4

Q ss_pred             CCCcccCCCCcccccchhhhhhhhcccccccccccccccCccccccccCCCcccchhHHHHHHhhcCCCCcCCCceecCC
Q psy1798          40 EKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFR  119 (353)
Q Consensus        40 ~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~  119 (353)
                      ...|.|.+|++.|.....|.+||+-|.     .-+                                       ++-|..
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~-----~vk---------------------------------------r~lct~  150 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHS-----DVK---------------------------------------RHLCTF  150 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhcc-----HHH---------------------------------------HHHHhh
Confidence            345889999999999888988988632     222                                       388999


Q ss_pred             CCccCCCchhHHHHHhhhcCCCCccCCCCCccccChHHHHHHHHHhcCCccccCcccCccccccccccchHHHHHhhhcC
Q psy1798         120 CRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYC  199 (353)
Q Consensus       120 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~c~~c~~~~~~~~~~~l~~h~~~~  199 (353)
                      ||+.|.+..+|.+|+++|++.+||+|..|++.|..+-.|..|+..+|....                   .+.-..    
T Consensus       151 cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~-------------------~yayke----  207 (267)
T KOG3576|consen  151 CGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQH-------------------QYAYKE----  207 (267)
T ss_pred             ccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchH-------------------HHHHHH----
Confidence            999999999999999999999999999999999999999999888886521                   111111    


Q ss_pred             CCCCCcccccccchhhccCHHHHHHHHHhhhCC
Q psy1798         200 PSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGR  232 (353)
Q Consensus       200 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  232 (353)
                        -+.+.|.|..||.+-.....+..|+..|+..
T Consensus       208 --rr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  208 --RRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             --hhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence              1245567777777766666667777666543

>PHA00733 hypothetical protein

Probab=99.23  E-value=6e-12  Score=93.31  Aligned_cols=102  Identities=18%  Similarity=0.207  Sum_probs=78.7

Q ss_pred             CHHHHHHHHHhhhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCcceee
Q psy1798         218 QSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYR  297 (353)
Q Consensus       218 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~  297 (353)
                      +...|.++-.+-...+++.|.+|.+.|..+..|..+                ..|..|+.            ....+||+
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------------~~l~~~~~------------~~~~kPy~   75 (128)
T PHA00733         24 TLEELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDES----------------SYLYKLLT------------SKAVSPYV   75 (128)
T ss_pred             CHHHhhhhhcCChhhhhHHHHHHhhhccChhhhcch----------------HHHHhhcc------------cCCCCCcc
Confidence            345566665555556788899998888887777444                22333322            33467899


Q ss_pred             CCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         298 CFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       298 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      |..|++.|.+...|..|++.|  ..+|.|++|++.|.....|..|+...|++
T Consensus        76 C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733         76 CPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             CCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcCc
Confidence            999999999999999999876  46799999999999999999999999986

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.20  E-value=7.4e-11  Score=107.36  Aligned_cols=147  Identities=16%  Similarity=0.324  Sum_probs=103.2

Q ss_pred             ccCCCCCccccChHHHHHHHHHhcCCccccCcccCcc--ccccccccchHHHHHhhhcCCCCCCcccccccchhhccCHH
Q psy1798         143 YACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVH--CNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSA  220 (353)
Q Consensus       143 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~c~~--c~~~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~  220 (353)
                      ..|+-|....... +|..| ...-.    -....|+.  |+..|..   ..+           ...+.|+.|+..|. ..
T Consensus       408 V~C~NC~~~i~l~-~l~lH-e~~C~----r~~V~Cp~~~Cg~v~~r---~el-----------~~H~~C~~Cgk~f~-~s  466 (567)
T PLN03086        408 VECRNCKHYIPSR-SIALH-EAYCS----RHNVVCPHDGCGIVLRV---EEA-----------KNHVHCEKCGQAFQ-QG  466 (567)
T ss_pred             EECCCCCCccchh-HHHHH-HhhCC----CcceeCCcccccceeec---ccc-----------ccCccCCCCCCccc-hH
Confidence            4566666554433 34455 22222    23345663  7766642   222           33368999999985 67


Q ss_pred             HHHHHHHhhhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCcceeeCCC
Q psy1798         221 HMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFV  300 (353)
Q Consensus       221 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~  300 (353)
                      .|..|+..++  .++.|+ |++.+ ....|..|+.                      .           +.+.+++.|..
T Consensus       467 ~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~----------------------t-----------hCp~Kpi~C~f  509 (567)
T PLN03086        467 EMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQA----------------------S-----------TCPLRLITCRF  509 (567)
T ss_pred             HHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhh----------------------c-----------cCCCCceeCCC
Confidence            7999999875  789999 99755 5578878752                      1           66778899999


Q ss_pred             CCCccCC----------cchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         301 CPYLSRH----------KGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       301 C~~~f~~----------~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      |+..|..          ...|..|..+. +.+++.|..||+.+.. .++..|+...|..
T Consensus       510 C~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrl-rdm~~H~~~~h~~  566 (567)
T PLN03086        510 CGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVML-KEMDIHQIAVHQK  566 (567)
T ss_pred             CCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeee-hhHHHHHHHhhcC
Confidence            9999952          34799998885 8899999999988765 4688899888864

>KOG3993|consensus

Probab=99.16  E-value=1.4e-11  Score=104.83  Aligned_cols=216  Identities=16%  Similarity=0.150  Sum_probs=126.3

Q ss_pred             CceecCCCCccCCCchhHHHHHhhhcCCCCccCCCCCccccChHHHHHHHHHhcCCccccCcccCccccccccccchHHH
Q psy1798         113 GWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFL  192 (353)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~c~~c~~~~~~~~~~~l  192 (353)
                      +.|.|..|...|.+...|.+|.........|+|++|++.|+.-.+|..| ++.|.+..+...---+.-.+....  ....
T Consensus       266 GdyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASH-RRWHKPR~eaa~a~~~P~k~~~~~--rae~  342 (500)
T KOG3993|consen  266 GDYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASH-RRWHKPRPEAAKAGSPPPKQAVET--RAEV  342 (500)
T ss_pred             HHHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhh-hcccCCchhhhhcCCCChhhhhhh--hhhh
Confidence            3499999999999999999998766656679999999999999999999 999976322110000000000000  1111


Q ss_pred             HHhhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCccccchhH-HHHhhhhccccCCCCcCCCCcc
Q psy1798         193 LKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWN-LKMHMHFLCHHCNRFGSRDIGD  271 (353)
Q Consensus       193 ~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~-l~~H~~~~C~~C~~~~~~~~~~  271 (353)
                      +.-.+...-.....|.|..|++.|.+..-|+.|+.+|+.-..-.=.  .-.|..... -..|   .+..+.-        
T Consensus       343 ~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~--a~~f~~s~~~~l~~---~~~~~a~--------  409 (500)
T KOG3993|consen  343 QEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEK--APKFLLSRVIPLMH---FNQAVAT--------  409 (500)
T ss_pred             hhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhc--ccCcchhhcccccc---ccccccc--------
Confidence            1111111111244799999999999999999999888643221110  111211111 0111   1111111        


Q ss_pred             ccccccccccccchhcccCCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhc
Q psy1798         272 LIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKH  347 (353)
Q Consensus       272 l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  347 (353)
                         |....+..+...+........-.|..||..+..+..=..+.+--..+..|.|.+|.-.|.+..+|.+|++.-|
T Consensus       410 ---h~~a~~~~g~~vl~~a~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~H  482 (500)
T KOG3993|consen  410 ---HSSASDSHGDEVLYVAGSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCH  482 (500)
T ss_pred             ---ccccccccccceeeeeccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcC
Confidence               1111111111111111111234578888888877766666554445677889999999999999999987766

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.05  E-value=1e-09  Score=99.98  Aligned_cols=107  Identities=21%  Similarity=0.477  Sum_probs=65.1

Q ss_pred             eecCCCCccCCCchhHHHHHhhhcCCCCccCCCCCccccChHHHHHHHHHhcCCccccCcccCccccccccccchHHHHH
Q psy1798         115 FQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLK  194 (353)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~c~~c~~~~~~~~~~~l~~  194 (353)
                      +.|+.|++.|. ...|..|++.++  .++.|+ ||+.+ .+..|..| ...|-+   .+++.|+.|+..+..-..     
T Consensus       454 ~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H-~~thCp---~Kpi~C~fC~~~v~~g~~-----  519 (567)
T PLN03086        454 VHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQH-QASTCP---LRLITCRFCGDMVQAGGS-----  519 (567)
T ss_pred             ccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhh-hhccCC---CCceeCCCCCCccccCcc-----
Confidence            56888888875 577888888764  678888 88644 56777778 455555   445555555544421000     


Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCccccchhHHHHhh
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM  254 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  254 (353)
                               ...+.        ...+.|..|.... +.+++.|..|++.+..+. +..|+
T Consensus       520 ---------~~d~~--------d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlrd-m~~H~  560 (567)
T PLN03086        520 ---------AMDVR--------DRLRGMSEHESIC-GSRTAPCDSCGRSVMLKE-MDIHQ  560 (567)
T ss_pred             ---------ccchh--------hhhhhHHHHHHhc-CCcceEccccCCeeeehh-HHHHH
Confidence                     00000        0235677887774 778888888888777653 34443

>PHA02768 hypothetical protein; Provisional

Probab=98.97  E-value=2.3e-10  Score=69.33  Aligned_cols=44  Identities=18%  Similarity=0.381  Sum_probs=40.6

Q ss_pred             eeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHH
Q psy1798         295 MYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIH  340 (353)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  340 (353)
                      .|+|+.||+.|+..++|..|+++|+  ++|+|..|++.|...+.|+
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            3899999999999999999999998  7999999999999877765

>PHA00733 hypothetical protein

Probab=98.90  E-value=2.3e-09  Score=79.52  Aligned_cols=82  Identities=17%  Similarity=0.268  Sum_probs=63.8

Q ss_pred             CcccccccchhhccCHHHHHHH--HH---hhhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccc
Q psy1798         204 TVGFQCYLCLYITRQSAHMRQH--LR---KHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQ  278 (353)
Q Consensus       204 ~~~~~C~~C~~~f~~~~~l~~H--~~---~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~  278 (353)
                      ++++.|..|...|.....|..+  +.   .+.+++||.|+.|++.|.+...|..|+..                      
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~----------------------   95 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRY----------------------   95 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhc----------------------
Confidence            6778888888888776666655  22   23457899999999999999999998621                      


Q ss_pred             cccccchhcccCCCcceeeCCCCCCccCCcchHHHHHHHhcC
Q psy1798         279 CSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTG  320 (353)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  320 (353)
                                 +  ..+|.|.+|++.|.....|..|+...++
T Consensus        96 -----------h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         96 -----------T--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             -----------C--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence                       1  2358999999999999999999986665

>PHA02768 hypothetical protein; Provisional

Probab=98.74  E-value=4.8e-09  Score=63.65  Aligned_cols=44  Identities=18%  Similarity=0.381  Sum_probs=40.0

Q ss_pred             eeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhh
Q psy1798          14 MYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIH   59 (353)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~   59 (353)
                      .|+|+.||+.|...+.|..|+++|+  ++|+|..|++.|.....|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4899999999999999999999997  6999999999998777663

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.69  E-value=1e-08  Score=53.10  Aligned_cols=26  Identities=42%  Similarity=1.030  Sum_probs=23.9

Q ss_pred             hHHHHHHHhcCCCCccCCCCcccccC
Q psy1798         310 DVKKHVRKHTGEKPYECNLCDYKATQ  335 (353)
Q Consensus       310 ~l~~H~~~h~~~~~~~C~~C~~~f~~  335 (353)
                      +|..|+++|++++||.|++|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            58899999999999999999999974

...

>KOG3993|consensus

Probab=98.53  E-value=1.2e-08  Score=87.28  Aligned_cols=112  Identities=17%  Similarity=0.228  Sum_probs=73.6

Q ss_pred             eeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhccccccccc--ccccccCccccccccCCCc
Q psy1798          14 MYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTS--ENVVLSGLHSCVHCYGDLS   91 (353)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~--~~~~~~~~~~c~~c~~~~~   91 (353)
                      .|.|..|...|.....|.+|-=.......|+|++|+|.|..-.+|..|.+=|.......  ..+..         .....
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~---------k~~~~  337 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPP---------KQAVE  337 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCCh---------hhhhh
Confidence            48899999999999999999644444456999999999999999999988644322111  00000         00000


Q ss_pred             ccchhHHHHHHhhcCCCCcCCCceecCCCCccCCCchhHHHHHhhhc
Q psy1798          92 SATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHT  138 (353)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  138 (353)
                      +..+...   -+. +.+.++++-|.|.+|++.|..+.-|..|+.+|.
T Consensus       338 ~rae~~e---a~r-sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  338 TRAEVQE---AER-SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             hhhhhhh---ccc-cCCcccCceeecHHhhhhhHHHHHHHHhHHhhh
Confidence            0111100   010 222344567999999999999999999988765

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.47  E-value=8.2e-08  Score=49.67  Aligned_cols=26  Identities=38%  Similarity=0.961  Sum_probs=23.7

Q ss_pred             HHHHHHHhhhCCCCcCCCCCCccccc
Q psy1798         221 HMRQHLRKHTGRRPFPCDMCEYSAAQ  246 (353)
Q Consensus       221 ~l~~H~~~h~~~~~~~C~~C~~~f~~  246 (353)
                      +|.+|+++|++++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47899999999999999999999863

...

>PHA00616 hypothetical protein

Probab=98.47  E-value=5e-08  Score=56.21  Aligned_cols=34  Identities=24%  Similarity=0.463  Sum_probs=26.7

Q ss_pred             eeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         295 MYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      ||+|..||..|.+++.|..|+++|++++++.|.+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            5778888888888888888888888888777653

>PHA00732 hypothetical protein

Probab=98.40  E-value=2e-07  Score=62.48  Aligned_cols=48  Identities=23%  Similarity=0.566  Sum_probs=39.9

Q ss_pred             eeeCCCCCCccCCcchHHHHHHH-hcCCCCccCCCCcccccCchHHHHHHhhhcC
Q psy1798         295 MYRCFVCPYLSRHKGDVKKHVRK-HTGEKPYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      ||.|.+|++.|.+..+|..|++. |.   ++.|+.||+.|.   .|..|+.+..+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccCC
Confidence            58999999999999999999984 64   468999999998   57788866543

>PHA00616 hypothetical protein

Probab=98.35  E-value=2.3e-07  Score=53.50  Aligned_cols=30  Identities=17%  Similarity=0.260  Sum_probs=28.8

Q ss_pred             CccCCCCcccccCchHHHHHHhhhcCCCCC
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKLKHNMPFI  352 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  352 (353)
                      ||+|+.||+.|.+..+|..|++.|||.+++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~   30 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKL   30 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcc
Confidence            699999999999999999999999999886

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.27  E-value=1.5e-06  Score=54.16  Aligned_cols=51  Identities=22%  Similarity=0.510  Sum_probs=41.7

Q ss_pred             eeeCCCCCCccCCcchHHHHHH-HhcCC-CCccCCCCcccccCchHHHHHHhhhcC
Q psy1798         295 MYRCFVCPYLSRHKGDVKKHVR-KHTGE-KPYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      .|.|+.|++ -.+...|..|.. .|..+ +.+.|++|...+.  .+|..||..+|+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            389999999 566789999987 55443 5699999998755  599999999885

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.07  E-value=3.5e-06  Score=56.53  Aligned_cols=46  Identities=24%  Similarity=0.581  Sum_probs=39.5

Q ss_pred             eeecCCCCCccCchhhhhhHhhh-hcCCCCcccCCCCcccccchhhhhhhhcc
Q psy1798          14 MYRCFVCPYLSRHKGDVKKHVRK-HTGEKPYECNLCDYKATQNSSIHFHMKVG   65 (353)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~~~~~~~l~~H~~~~   65 (353)
                      +|.|..|++.|.+...|..|++. |.   ++.|+.|++.|.   .|..|+++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhccc
Confidence            58899999999999999999985 54   468999999997   688888653

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.93  E-value=4.5e-06  Score=41.89  Aligned_cols=22  Identities=27%  Similarity=0.702  Sum_probs=12.2

Q ss_pred             ccCCCCcccccCchHHHHHHhh
Q psy1798         324 YECNLCDYKATQNSSIHFHMKL  345 (353)
Q Consensus       324 ~~C~~C~~~f~~~~~l~~H~~~  345 (353)
                      |.|++|++.|.+...|..||+.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            3455555555555555555554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.89  E-value=7.3e-06  Score=41.10  Aligned_cols=23  Identities=35%  Similarity=0.845  Sum_probs=21.6

Q ss_pred             eeCCCCCCccCCcchHHHHHHHh
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVRKH  318 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h  318 (353)
                      |+|++|++.|.++..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.85  E-value=9.3e-06  Score=41.16  Aligned_cols=24  Identities=25%  Similarity=0.692  Sum_probs=13.6

Q ss_pred             ccCCCCcccccCchHHHHHHhhhc
Q psy1798         324 YECNLCDYKATQNSSIHFHMKLKH  347 (353)
Q Consensus       324 ~~C~~C~~~f~~~~~l~~H~~~~h  347 (353)
                      |.|++|++.|.+...|..|+.++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            456666666666666666666654

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.76  E-value=2.6e-05  Score=48.49  Aligned_cols=50  Identities=20%  Similarity=0.451  Sum_probs=38.9

Q ss_pred             eeecCCCCCccCchhhhhhHhhh-hcCC-CCcccCCCCcccccchhhhhhhhccc
Q psy1798          14 MYRCFVCPYLSRHKGDVKKHVRK-HTGE-KPYECNLCDYKATQNSSIHFHMKVGV   66 (353)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~~~~~~~l~~H~~~~~   66 (353)
                      .|.|+.|++ ..+...|..|... |..+ +.+.||+|...+.  .+|..||...|
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            589999999 5667899999766 4433 4699999998655  48999997644

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.70  E-value=1.9e-05  Score=56.55  Aligned_cols=24  Identities=21%  Similarity=0.580  Sum_probs=20.3

Q ss_pred             CccCCCCcccccCchHHHHHHhhh
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKLK  346 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~~  346 (353)
                      .+.|.+|++.|.+...|..||+.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            588999999999999999999875

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.68  E-value=1.8e-05  Score=41.42  Aligned_cols=26  Identities=23%  Similarity=0.531  Sum_probs=16.8

Q ss_pred             CccCCCCcccccCchHHHHHHhhhcC
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      ||.|..|++.|.+...|..|++.|++
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            45666666666666666666666543

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.61  E-value=2.1e-05  Score=46.34  Aligned_cols=33  Identities=21%  Similarity=0.486  Sum_probs=23.2

Q ss_pred             cCCCCccCCCCcccccCchHHHHHHhhhcCCCC
Q psy1798         319 TGEKPYECNLCDYKATQNSSIHFHMKLKHNMPF  351 (353)
Q Consensus       319 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  351 (353)
                      ..+.|-.|++|+..+.+..+|++|+.+.|+++|
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            346788899999999999999999999998886

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.60  E-value=4.8e-05  Score=38.42  Aligned_cols=24  Identities=29%  Similarity=0.767  Sum_probs=20.4

Q ss_pred             eeCCCCCCccCCcchHHHHHHHhc
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVRKHT  319 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h~  319 (353)
                      |.|++|+..|.+...|..|+.+|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999998874

...

>KOG1146|consensus

Probab=97.52  E-value=5.6e-05  Score=74.55  Aligned_cols=101  Identities=16%  Similarity=0.246  Sum_probs=61.4

Q ss_pred             cCCCCCccCchhhhhhHhh-hhcCCCCcccCCCCcccccchhhhhhhhcccccccccccccccCccccccccCCCcccch
Q psy1798          17 CFVCPYLSRHKGDVKKHVR-KHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSATE   95 (353)
Q Consensus        17 C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~   95 (353)
                      |.-|+..+.....+..|++ .+.-.+.|.|+.|++.|.....|..|||..|.....            .+|....+....
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~------------~~c~~gq~~~~~  506 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS------------AYCKAGQNHPRL  506 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccch------------hHhHhccccccc
Confidence            4445555555555555543 355567899999999999999999999884321110            111000000000


Q ss_pred             hHHHHHHhhcCCCCcCCCceecCCCCccCCCchhHHHHHhh
Q psy1798          96 TELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRT  136 (353)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  136 (353)
                      ...       ......-++|.|..|+..+....+|.+|++.
T Consensus       507 arg-------~~~~~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  507 ARG-------EVYRCPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccc-------ccccCCCCcccceeeeeeeecchHHHHHHHH
Confidence            000       0001123579999999999999999999875

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.43  E-value=4.9e-05  Score=39.72  Aligned_cols=25  Identities=20%  Similarity=0.398  Sum_probs=23.2

Q ss_pred             eeeCCCCCCccCCcchHHHHHHHhc
Q psy1798         295 MYRCFVCPYLSRHKGDVKKHVRKHT  319 (353)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H~~~h~  319 (353)
                      ||+|.+|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5899999999999999999998775

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.32  E-value=0.00012  Score=36.94  Aligned_cols=24  Identities=33%  Similarity=0.823  Sum_probs=15.8

Q ss_pred             ccCCCCcccccCchHHHHHHhhhcC
Q psy1798         324 YECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       324 ~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      |.|+.|++... ...|.+|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            56777777766 7777777777764

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.20  E-value=0.00015  Score=60.37  Aligned_cols=36  Identities=33%  Similarity=0.624  Sum_probs=29.3

Q ss_pred             CCCcccCC--CCcccccchhhhhhhhcccccccccccc
Q psy1798          40 EKPYECNL--CDYKATQNSSIHFHMKVGVQAIFTSENV   75 (353)
Q Consensus        40 ~~~~~C~~--C~~~~~~~~~l~~H~~~~~~~~~~~~~~   75 (353)
                      ++||+|++  |+|.|.....|.-||...|+...+-+.|
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p  384 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP  384 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCC
Confidence            59999997  9999999999999998877655444444

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.14  E-value=0.00022  Score=59.47  Aligned_cols=52  Identities=27%  Similarity=0.615  Sum_probs=45.4

Q ss_pred             CceeecCC--CCCccCchhhhhhHhhhhc-------------------CCCCcccCCCCcccccchhhhhhhh
Q psy1798          12 VIMYRCFV--CPYLSRHKGDVKKHVRKHT-------------------GEKPYECNLCDYKATQNSSIHFHMK   63 (353)
Q Consensus        12 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~-------------------~~~~~~C~~C~~~~~~~~~l~~H~~   63 (353)
                      +++|+|++  |++.|.+...|+=|+..-+                   ..+||+|..|+|+|.....|.-|..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            49999998  9999999999999876422                   3589999999999999999998875

>smart00355 ZnF_C2H2 zinc finger

Probab=96.95  E-value=0.00076  Score=34.50  Aligned_cols=22  Identities=27%  Similarity=0.563  Sum_probs=12.1

Q ss_pred             ccCCCCcccccCchHHHHHHhh
Q psy1798         324 YECNLCDYKATQNSSIHFHMKL  345 (353)
Q Consensus       324 ~~C~~C~~~f~~~~~l~~H~~~  345 (353)
                      |.|..|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~   22 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRT   22 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHH
Confidence            3455555555555555555553

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.94  E-value=0.0005  Score=49.04  Aligned_cols=24  Identities=25%  Similarity=0.553  Sum_probs=20.6

Q ss_pred             ceecCCCCccCCCchhHHHHHhhh
Q psy1798         114 WFQCFRCRYSNKFRSNFLRHIRTH  137 (353)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h  137 (353)
                      .+.|..|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            389999999999999999999964

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.90  E-value=0.00096  Score=39.45  Aligned_cols=34  Identities=18%  Similarity=0.390  Sum_probs=18.1

Q ss_pred             CCCCceeecCCCCCccCchhhhhhHhhhhcCCCC
Q psy1798           9 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKP   42 (353)
Q Consensus         9 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   42 (353)
                      ..+..+-.|++|+.+++...+|++|+.+.++.+|
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3445566677777777777777777766665544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.78  E-value=0.0012  Score=33.76  Aligned_cols=24  Identities=38%  Similarity=0.721  Sum_probs=22.0

Q ss_pred             eeCCCCCCccCCcchHHHHHHHhc
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVRKHT  319 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h~  319 (353)
                      |+|..|++.|.+...|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999999775

>PRK04860 hypothetical protein; Provisional

Probab=96.62  E-value=0.0015  Score=50.45  Aligned_cols=40  Identities=33%  Similarity=0.639  Sum_probs=35.1

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCch
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNS  337 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  337 (353)
                      -+|.|. |+.   ....+.+|.++|+++++|.|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            479998 998   7778899999999999999999999886543

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.61  E-value=0.00095  Score=33.98  Aligned_cols=22  Identities=18%  Similarity=0.670  Sum_probs=13.5

Q ss_pred             ccCCCCcccccCchHHHHHHhh
Q psy1798         324 YECNLCDYKATQNSSIHFHMKL  345 (353)
Q Consensus       324 ~~C~~C~~~f~~~~~l~~H~~~  345 (353)
                      |.|.+|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666554

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.56  E-value=0.0017  Score=32.64  Aligned_cols=24  Identities=33%  Similarity=0.915  Sum_probs=19.4

Q ss_pred             eeCCCCCCccCCcchHHHHHHHhcC
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVRKHTG  320 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h~~  320 (353)
                      |+|..|.+... ...|.+|++.|++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            78999999998 9999999998753

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.56  E-value=0.001  Score=33.88  Aligned_cols=23  Identities=17%  Similarity=0.550  Sum_probs=21.1

Q ss_pred             eeCCCCCCccCCcchHHHHHHHh
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVRKH  318 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h  318 (353)
                      |.|.+|+..|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999999754

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.21  E-value=0.0013  Score=34.24  Aligned_cols=22  Identities=27%  Similarity=0.614  Sum_probs=16.2

Q ss_pred             ccCCCCcccccCchHHHHHHhh
Q psy1798         324 YECNLCDYKATQNSSIHFHMKL  345 (353)
Q Consensus       324 ~~C~~C~~~f~~~~~l~~H~~~  345 (353)
                      |.|.+|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5677777777777777777654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2785|consensus

Probab=96.12  E-value=0.013  Score=50.65  Aligned_cols=53  Identities=25%  Similarity=0.411  Sum_probs=44.9

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhcCC-----------------------CCccCCCCc---ccccCchHHHHHHhhh
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHTGE-----------------------KPYECNLCD---YKATQNSSIHFHMKLK  346 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------~~~~C~~C~---~~f~~~~~l~~H~~~~  346 (353)
                      .|-.|-.|+..+.+...-..||..+++-                       .-+.|-.|.   +.|.+-..++.||...
T Consensus       165 ~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~K  243 (390)
T KOG2785|consen  165 IPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRDK  243 (390)
T ss_pred             CCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhhc
Confidence            3578999999999999999999988862                       236788888   9999999999999754

>PRK04860 hypothetical protein; Provisional

Probab=96.10  E-value=0.0043  Score=47.96  Aligned_cols=41  Identities=32%  Similarity=0.625  Sum_probs=35.4

Q ss_pred             ceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchh
Q psy1798          13 IMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSS   57 (353)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~   57 (353)
                      -+|.|. |+.   ....++.|.+++.+.++|.|..|+..+.....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~~  158 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKGE  158 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEecc
Confidence            468998 988   77888999999999999999999998876543

>KOG2231|consensus

Probab=95.88  E-value=0.02  Score=54.07  Aligned_cols=66  Identities=17%  Similarity=0.440  Sum_probs=40.5

Q ss_pred             ccCccccccccccchHHHHHhhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCcc---cc------
Q psy1798         175 RHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYS---AA------  245 (353)
Q Consensus       175 ~~c~~c~~~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~---f~------  245 (353)
                      +.|.+|+..+.-                ....-.|..| ..|.+...|+.|++.-+  +.+.|..|-..   |.      
T Consensus       100 ~~C~~C~~~~~~----------------~~~~~~~~~c-~~~~s~~~Lk~H~~~~H--~~~~c~lC~~~~kif~~e~k~Y  160 (669)
T KOG2231|consen  100 HSCHICDRRFRA----------------LYNKKECLHC-TEFKSVENLKNHMRDQH--KLHLCSLCLQNLKIFINERKLY  160 (669)
T ss_pred             hhcCccccchhh----------------hcccCCCccc-cchhHHHHHHHHHHHhh--hhhccccccccceeeeeeeehe
Confidence            567788776642                1223468888 77888899999985432  24555554422   22      


Q ss_pred             chhHHHHhhhhccc
Q psy1798         246 QKWNLKMHMHFLCH  259 (353)
Q Consensus       246 ~~~~l~~H~~~~C~  259 (353)
                      +...|..|+...+.
T Consensus       161 t~~el~~h~~~gd~  174 (669)
T KOG2231|consen  161 TRAELNLHLMFGDP  174 (669)
T ss_pred             hHHHHHHHHhcCCC
Confidence            34577788754444

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.61  E-value=0.0062  Score=31.60  Aligned_cols=22  Identities=18%  Similarity=0.535  Sum_probs=13.0

Q ss_pred             eecCCCCCccCchhhhhhHhhh
Q psy1798          15 YRCFVCPYLSRHKGDVKKHVRK   36 (353)
Q Consensus        15 ~~C~~C~~~f~~~~~l~~H~~~   36 (353)
                      |-|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            4566666666666666666543

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2231|consensus

Probab=95.35  E-value=0.031  Score=52.78  Aligned_cols=48  Identities=23%  Similarity=0.272  Sum_probs=32.7

Q ss_pred             eecCCCCccCCCchhHHHHHhhhcCCCCccCCCC------CccccChHHHHHHHHHhc
Q psy1798         115 FQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTEC------GYASILSTDLRKHIERIH  166 (353)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C------~~~f~~~~~l~~H~~~~H  166 (353)
                      -.|..|...|.+...|..|++.++    |.|-.|      +.-|....+|..|....|
T Consensus       183 p~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  183 PLCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             ccchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC
Confidence            567778888888888888877654    344444      345666777777766655

>KOG1146|consensus

Probab=95.09  E-value=0.0034  Score=62.61  Aligned_cols=141  Identities=18%  Similarity=0.313  Sum_probs=83.8

Q ss_pred             ceeecCCCCCccCchhhhhhHhhhhc-------------------------CCCCcccCCCCcccccchhhhhhhhcccc
Q psy1798          13 IMYRCFVCPYLSRHKGDVKKHVRKHT-------------------------GEKPYECNLCDYKATQNSSIHFHMKVGVQ   67 (353)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~-------------------------~~~~~~C~~C~~~~~~~~~l~~H~~~~~~   67 (353)
                      +.++|+.|++.|.....|..|||.-+                         +.++|.|..|...++.+..|.+||+..-.
T Consensus       464 kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS~~h  543 (1406)
T KOG1146|consen  464 KTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQSDLH  543 (1406)
T ss_pred             ccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHHHHhh
Confidence            77999999999999999999999721                         24779999999999999999999976211


Q ss_pred             ccccc---cccc----ccCccccccccCCCcccchhHHHHHHhhcCCCCcCCCceecCCCCccCCCchhHHHHHhh-hcC
Q psy1798          68 AIFTS---ENVV----LSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRT-HTG  139 (353)
Q Consensus        68 ~~~~~---~~~~----~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~  139 (353)
                      .....   +...    ......+..+...-.......        ...........|++|++...-..+|+.|+.. ++-
T Consensus       544 ~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ag--------s~~pktkP~~~C~vc~yetniarnlrihmtss~~s  615 (1406)
T KOG1146|consen  544 RNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAG--------SSGPKTKPSWRCEVCSYETNIARNLRIHMTASPSS  615 (1406)
T ss_pred             HHHHHHHHhccccchhhhhhhhcccCcccccCCCCCC--------CCCCCCCCCcchhhhcchhhhhhccccccccCCCC
Confidence            00000   0000    000001111111111110000        0001123458999999999999999999875 333


Q ss_pred             CCCccCCCCCccccChHHHHHH
Q psy1798         140 HKPYACTECGYASILSTDLRKH  161 (353)
Q Consensus       140 ~~~~~C~~C~~~f~~~~~l~~H  161 (353)
                      ..|..+-.+...+.....+..+
T Consensus       616 ~~p~~~Lq~~it~~l~~~~~~~  637 (1406)
T KOG1146|consen  616 SPPSLVLQQNITSSLASLLGGQ  637 (1406)
T ss_pred             CChHHHhhhcchhhccccccCc
Confidence            3335555555555554444444

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.20  E-value=0.039  Score=27.95  Aligned_cols=20  Identities=20%  Similarity=0.424  Sum_probs=13.7

Q ss_pred             eeCCCCCCccCCcchHHHHHH
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVR  316 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~  316 (353)
                      ..|+.||+.| ....|..|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            3577777777 5666777754

>KOG2482|consensus

Probab=93.97  E-value=0.14  Score=43.67  Aligned_cols=87  Identities=17%  Similarity=0.277  Sum_probs=53.8

Q ss_pred             hhHHHHHhhhcCC-CCccCCCCCccc-cChHHHHHHHHHhcCCccccCcccCccccccccccchHHHHHhhhcCCCCCCc
Q psy1798         128 SNFLRHIRTHTGH-KPYACTECGYAS-ILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTV  205 (353)
Q Consensus       128 ~~l~~H~~~h~~~-~~~~C~~C~~~f-~~~~~l~~H~~~~H~~~~~~~~~~c~~c~~~~~~~~~~~l~~h~~~~~~~~~~  205 (353)
                      ..|..|++...+. ...+|-.|...+ .+++.+..|+-.+|.-+.... -       ...  .-..+..|++..    -.
T Consensus       129 eaLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlp-D-------niV--yvnelLehLkek----L~  194 (423)
T KOG2482|consen  129 EALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLP-D-------NIV--YVNELLEHLKEK----LE  194 (423)
T ss_pred             HHHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCC-c-------cee--eHHHHHHHHHHH----Hh
Confidence            4455555544322 236788898655 678889999888885332110 0       000  033455554432    23


Q ss_pred             ccccccchhhccCHHHHHHHHHh
Q psy1798         206 GFQCYLCLYITRQSAHMRQHLRK  228 (353)
Q Consensus       206 ~~~C~~C~~~f~~~~~l~~H~~~  228 (353)
                      .++|..|.+.|..+..|+.||+.
T Consensus       195 r~~CLyCekifrdkntLkeHMrk  217 (423)
T KOG2482|consen  195 RLRCLYCEKIFRDKNTLKEHMRK  217 (423)
T ss_pred             hheeeeeccccCCcHHHHHHHHh
Confidence            47899999999999999999874

>KOG2482|consensus

Probab=93.85  E-value=0.09  Score=44.88  Aligned_cols=52  Identities=15%  Similarity=0.437  Sum_probs=40.7

Q ss_pred             ceeecCCCCCcc-CchhhhhhHhhhhcC----------------------CCCcccCCCCcccccchhhhhhhhc
Q psy1798          13 IMYRCFVCPYLS-RHKGDVKKHVRKHTG----------------------EKPYECNLCDYKATQNSSIHFHMKV   64 (353)
Q Consensus        13 ~~~~C~~C~~~f-~~~~~l~~H~~~h~~----------------------~~~~~C~~C~~~~~~~~~l~~H~~~   64 (353)
                      ....|..|...+ .+.+.+..|+-.-++                      ...+.|-.|.+.|..+..|+.||+.
T Consensus       143 fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeHMrk  217 (423)
T KOG2482|consen  143 FSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEHMRK  217 (423)
T ss_pred             eeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHHHHh
Confidence            345799998887 777888888754332                      1347899999999999999999975

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.84  E-value=0.035  Score=30.72  Aligned_cols=23  Identities=30%  Similarity=0.595  Sum_probs=16.7

Q ss_pred             CccCCCCcccccCchHHHHHHhh
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKL  345 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~  345 (353)
                      +|.|.+|+..|.+...+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            46777777777777777777654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.83  E-value=0.052  Score=27.47  Aligned_cols=21  Identities=24%  Similarity=0.517  Sum_probs=18.1

Q ss_pred             ccCCCCcccccCchHHHHHHhh
Q psy1798         324 YECNLCDYKATQNSSIHFHMKL  345 (353)
Q Consensus       324 ~~C~~C~~~f~~~~~l~~H~~~  345 (353)
                      ..|+.||+.| ....|..|++.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4799999999 77889999864

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=93.73  E-value=0.058  Score=29.43  Aligned_cols=24  Identities=33%  Similarity=0.908  Sum_probs=15.9

Q ss_pred             eeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcc
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDY  331 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  331 (353)
                      |+|.+||..+....            .++.|++||.
T Consensus         2 ~~C~~CGy~y~~~~------------~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE------------APWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc------------CCCcCcCCCC
Confidence            67777777765432            5677777775

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=93.27  E-value=0.098  Score=44.69  Aligned_cols=136  Identities=23%  Similarity=0.353  Sum_probs=77.9

Q ss_pred             eeecCC--CCCccCchhhhhhHhhhhcCCCCcccCCCC---cccc------cchhhhhhhhcccccccccccccccCccc
Q psy1798          14 MYRCFV--CPYLSRHKGDVKKHVRKHTGEKPYECNLCD---YKAT------QNSSIHFHMKVGVQAIFTSENVVLSGLHS   82 (353)
Q Consensus        14 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~---~~~~------~~~~l~~H~~~~~~~~~~~~~~~~~~~~~   82 (353)
                      .|.|+.  |+.+......|..|.+..++.  +.|.+|-   +.|.      ++..|+.|.....      +.....+-=.
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~------~e~GFKGHP~  222 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGL------EEEGFKGHPL  222 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCc------cccCcCCCch
Confidence            478887  888888888999998876553  5677762   2343      3455666643211      1112333346


Q ss_pred             cccccCCCcccchhH-----HHHHHhhcCCCCcCCCceecCCCCccCCCchhHHHHHhhhcCCCCccCCC--C---C-cc
Q psy1798          83 CVHCYGDLSSATETE-----LLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTE--C---G-YA  151 (353)
Q Consensus        83 c~~c~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C---~-~~  151 (353)
                      |..|...|-..++.-     .+..|..|.+..        +.-.+.|.++..|..|.+..+    |-|.+  |   . ..
T Consensus       223 C~FC~~~FYdDDEL~~HcR~~HE~ChICD~v~--------p~~~QYFK~Y~~Le~HF~~~h----y~ct~qtc~~~k~~v  290 (493)
T COG5236         223 CIFCKIYFYDDDELRRHCRLRHEACHICDMVG--------PIRYQYFKSYEDLEAHFRNAH----YCCTFQTCRVGKCYV  290 (493)
T ss_pred             hhhccceecChHHHHHHHHhhhhhhhhhhccC--------ccchhhhhCHHHHHHHhhcCc----eEEEEEEEecCcEEE
Confidence            777776666666533     233344443321        222345777777777776422    22221  1   1 46


Q ss_pred             ccChHHHHHHHHHhcCCc
Q psy1798         152 SILSTDLRKHIERIHMPQ  169 (353)
Q Consensus       152 f~~~~~l~~H~~~~H~~~  169 (353)
                      |.....|..|+.+.|...
T Consensus       291 f~~~~el~~h~~~~h~~~  308 (493)
T COG5236         291 FPYHTELLEHLTRFHKVN  308 (493)
T ss_pred             eccHHHHHHHHHHHhhcc
Confidence            777778888877777554

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.04  E-value=0.082  Score=29.17  Aligned_cols=23  Identities=17%  Similarity=0.271  Sum_probs=18.6

Q ss_pred             ceecCCCCccCCCchhHHHHHhh
Q psy1798         114 WFQCFRCRYSNKFRSNFLRHIRT  136 (353)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~  136 (353)
                      +|.|++|+..|.+...+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            47788888888888888888764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=92.56  E-value=0.25  Score=35.78  Aligned_cols=55  Identities=24%  Similarity=0.548  Sum_probs=44.5

Q ss_pred             cceeeCCCCCCccCCcchHHHHHH-HhcCC-----------------------------------------CCccC----
Q psy1798         293 VIMYRCFVCPYLSRHKGDVKKHVR-KHTGE-----------------------------------------KPYEC----  326 (353)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-----------------------------------------~~~~C----  326 (353)
                      -+...|..|+.+..- +++..|++ .|+..                                         .-|.|    
T Consensus         9 ~~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~G~~C~~~~   87 (109)
T PF12013_consen    9 YRVLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYDGYRCQCDP   87 (109)
T ss_pred             CCEEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCCCeeeecCC
Confidence            355789999998876 78889987 44310                                         11889    


Q ss_pred             CCCcccccCchHHHHHHhhhcC
Q psy1798         327 NLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       327 ~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      ..|++...+...+..|++.+||
T Consensus        88 ~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   88 PHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCCCcEeccHHHHHHHHHHhcC
Confidence            9999999999999999999986

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2785|consensus

Probab=92.29  E-value=0.25  Score=43.11  Aligned_cols=25  Identities=16%  Similarity=0.236  Sum_probs=20.4

Q ss_pred             CCceecCCCCccCCCchhHHHHHhh
Q psy1798         112 PGWFQCFRCRYSNKFRSNFLRHIRT  136 (353)
Q Consensus       112 ~~~~~C~~C~~~f~~~~~l~~H~~~  136 (353)
                      ..++.|..|++.|.+......|++.
T Consensus        66 ~~~~~c~~c~k~~~s~~a~~~hl~S   90 (390)
T KOG2785|consen   66 ESVVYCEACNKSFASPKAHENHLKS   90 (390)
T ss_pred             ccceehHHhhccccChhhHHHHHHH
Confidence            4468899999999888888888865

>TIGR00622 ssl1 transcription factor ssl1

Probab=91.15  E-value=0.35  Score=34.66  Aligned_cols=26  Identities=31%  Similarity=0.356  Sum_probs=22.4

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhc
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHT  319 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~  319 (353)
                      ..|+|..|+..|--.-.+.-|...|+
T Consensus        80 ~~y~C~~C~~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        80 HRYVCAVCKNVFCVDCDVFVHESLHC  105 (112)
T ss_pred             cceeCCCCCCccccccchhhhhhccC
Confidence            45999999999998888888988885

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.47  E-value=0.063  Score=49.50  Aligned_cols=60  Identities=23%  Similarity=0.513  Sum_probs=54.5

Q ss_pred             ceeeCCCCCCccCCcchHHHHHH--HhcCC--CCccCC--CCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVR--KHTGE--KPYECN--LCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .++.|..|...|.....|.+|.+  .|.++  +++.|+  +|++.|.....+..|..+|.+.++++
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAK  353 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccc
Confidence            46899999999999999999999  89999  999999  89999999999999999999888653

>KOG4173|consensus

Probab=90.09  E-value=0.14  Score=40.36  Aligned_cols=51  Identities=20%  Similarity=0.405  Sum_probs=30.5

Q ss_pred             CCceeecCC--CCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhc
Q psy1798          11 NVIMYRCFV--CPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV   64 (353)
Q Consensus        11 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~   64 (353)
                      ....|.|++  |-++|.+......|...-++.   .|..|.+.|.+...|..|+..
T Consensus        76 ~~~~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E  128 (253)
T KOG4173|consen   76 RVPAFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILE  128 (253)
T ss_pred             ccccccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHH
Confidence            344566665  666666666666665443332   477777777777777666644

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=90.09  E-value=0.34  Score=29.93  Aligned_cols=50  Identities=22%  Similarity=0.532  Sum_probs=32.7

Q ss_pred             cccCccccccccccchHHHHHhhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCc
Q psy1798         174 VRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEY  242 (353)
Q Consensus       174 ~~~c~~c~~~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  242 (353)
                      +-.|..||....              +......|.|+.||......     -.+-.....+|.|+.||.
T Consensus         9 ~~~CtSCg~~i~--------------p~e~~v~F~CPnCGe~~I~R-----c~~CRk~g~~Y~Cp~CGF   58 (61)
T COG2888           9 PPVCTSCGREIA--------------PGETAVKFPCPNCGEVEIYR-----CAKCRKLGNPYRCPKCGF   58 (61)
T ss_pred             CceeccCCCEec--------------cCCceeEeeCCCCCceeeeh-----hhhHHHcCCceECCCcCc
Confidence            567888887653              12235568899999765443     233344567999999984

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=90.08  E-value=0.26  Score=27.04  Aligned_cols=24  Identities=33%  Similarity=0.913  Sum_probs=16.3

Q ss_pred             eeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcc
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDY  331 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  331 (353)
                      |+|.+||..+...            +.|..|++||.
T Consensus         3 ~~C~~CG~i~~g~------------~~p~~CP~Cg~   26 (34)
T cd00729           3 WVCPVCGYIHEGE------------EAPEKCPICGA   26 (34)
T ss_pred             EECCCCCCEeECC------------cCCCcCcCCCC
Confidence            7788888776533            14567888875

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2893|consensus

Probab=89.98  E-value=0.073  Score=42.91  Aligned_cols=50  Identities=16%  Similarity=0.350  Sum_probs=41.7

Q ss_pred             eecCCCCccCCCchhHHHHHhhhcCCCCccCCCCCccccChHHHHHHHHHhcCC
Q psy1798         115 FQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMP  168 (353)
Q Consensus       115 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  168 (353)
                      -.|+.|++.|.+...|+.|++.-    -|+|..|-+..-+-..|..|-.++|.+
T Consensus        11 pwcwycnrefddekiliqhqkak----hfkchichkkl~sgpglsihcmqvhke   60 (341)
T KOG2893|consen   11 PWCWYCNREFDDEKILIQHQKAK----HFKCHICHKKLFSGPGLSIHCMQVHKE   60 (341)
T ss_pred             ceeeecccccchhhhhhhhhhhc----cceeeeehhhhccCCCceeehhhhhhh
Confidence            46999999999999999998753    389999998777777788887778854

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=89.95  E-value=0.3  Score=41.85  Aligned_cols=24  Identities=25%  Similarity=0.546  Sum_probs=13.2

Q ss_pred             ccCCC--CCccccChHHHHHHHHHhc
Q psy1798         143 YACTE--CGYASILSTDLRKHIERIH  166 (353)
Q Consensus       143 ~~C~~--C~~~f~~~~~l~~H~~~~H  166 (353)
                      |.||.  |......+.+|..|....|
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H  177 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQH  177 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhc
Confidence            45554  4555555666666655444

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=89.71  E-value=0.16  Score=30.67  Aligned_cols=32  Identities=31%  Similarity=0.509  Sum_probs=21.6

Q ss_pred             ccCCCCceeecCCCCCccCchhhhhhHhhhhc
Q psy1798           7 NDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHT   38 (353)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   38 (353)
                      ....++.-++|+-||..|....+..+|+...+
T Consensus        10 ~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH   41 (65)
T COG4049          10 RDRDGEEFLRCPRCGMVFRRRKDYIRHVNKAH   41 (65)
T ss_pred             eccCCceeeeCCchhHHHHHhHHHHHHhhHHh
Confidence            34445666778888887777777777765433

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=88.99  E-value=0.41  Score=29.58  Aligned_cols=33  Identities=24%  Similarity=0.604  Sum_probs=21.9

Q ss_pred             eeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCccc
Q psy1798         295 MYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYK  332 (353)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  332 (353)
                      .|.|+.||..-...-.-   -+.+  ..+|.|+.||+.
T Consensus        27 ~F~CPnCGe~~I~Rc~~---CRk~--g~~Y~Cp~CGF~   59 (61)
T COG2888          27 KFPCPNCGEVEIYRCAK---CRKL--GNPYRCPKCGFE   59 (61)
T ss_pred             EeeCCCCCceeeehhhh---HHHc--CCceECCCcCcc
Confidence            49999999765543211   1222  378999999973

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=88.55  E-value=0.56  Score=29.11  Aligned_cols=33  Identities=24%  Similarity=0.655  Sum_probs=21.8

Q ss_pred             ceeeCCCCCCc-cCCcchHHHHHHHhcCCCCccCCCCccc
Q psy1798         294 IMYRCFVCPYL-SRHKGDVKKHVRKHTGEKPYECNLCDYK  332 (353)
Q Consensus       294 ~~~~C~~C~~~-f~~~~~l~~H~~~h~~~~~~~C~~C~~~  332 (353)
                      -.|.|+.||.. ...-..    -+..  ..+|.|+.||+.
T Consensus        24 ~~F~CPnCG~~~I~RC~~----CRk~--~~~Y~CP~CGF~   57 (59)
T PRK14890         24 VKFLCPNCGEVIIYRCEK----CRKQ--SNPYTCPKCGFE   57 (59)
T ss_pred             CEeeCCCCCCeeEeechh----HHhc--CCceECCCCCCc
Confidence            45999999988 433221    2222  368999999973

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=88.30  E-value=0.24  Score=45.64  Aligned_cols=52  Identities=21%  Similarity=0.239  Sum_probs=30.8

Q ss_pred             HHHHHhhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCC
Q psy1798         190 SFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCE  241 (353)
Q Consensus       190 ~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  241 (353)
                      ..+..+...+.......+.+..|...+.....+..|++.+....++.|..+.
T Consensus       402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  453 (467)
T COG5048         402 SNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILK  453 (467)
T ss_pred             cccccccccccccCCcCCCCCcchhhccCcccccccccccccCCceeecccc
Confidence            3333343334333344566777777777777777777777666655554443

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=86.94  E-value=0.32  Score=29.45  Aligned_cols=29  Identities=31%  Similarity=0.508  Sum_probs=20.4

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHh
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKH  318 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  318 (353)
                      ..++.-+.|+.|+..|.+.....+|++.-
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKa   40 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKA   40 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHH
Confidence            45566677777777777777777777533

>KOG2893|consensus

Probab=86.54  E-value=0.18  Score=40.69  Aligned_cols=47  Identities=19%  Similarity=0.481  Sum_probs=38.8

Q ss_pred             CCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcC
Q psy1798         298 CFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       298 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      |=.|++.|-+..-|..|++    .+-|+|-+|.+...+...|..|--..|.
T Consensus        13 cwycnrefddekiliqhqk----akhfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQK----AKHFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             eeecccccchhhhhhhhhh----hccceeeeehhhhccCCCceeehhhhhh
Confidence            7789999999999999987    3458999999998888888888444443

>TIGR00622 ssl1 transcription factor ssl1

Probab=86.32  E-value=2.4  Score=30.48  Aligned_cols=44  Identities=18%  Similarity=0.309  Sum_probs=23.9

Q ss_pred             ecCCCCccCCCchhHHHHHhhhcCCCCccCCCCCccccChHHHHHH
Q psy1798         116 QCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKH  161 (353)
Q Consensus       116 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  161 (353)
                      .|..|+..|.......  ...-.....|+|+.|...|-..-++..|
T Consensus        57 ~C~~C~~~f~~~~~~~--~~~~~~~~~y~C~~C~~~FC~dCD~fiH  100 (112)
T TIGR00622        57 FCFGCQGPFPKPPVSP--FDELKDSHRYVCAVCKNVFCVDCDVFVH  100 (112)
T ss_pred             cccCcCCCCCCccccc--ccccccccceeCCCCCCccccccchhhh
Confidence            3666666665432111  0001223457777777777777777777

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=84.18  E-value=0.61  Score=23.80  Aligned_cols=11  Identities=27%  Similarity=0.301  Sum_probs=7.4

Q ss_pred             cccccchhhcc
Q psy1798         207 FQCYLCLYITR  217 (353)
Q Consensus       207 ~~C~~C~~~f~  217 (353)
                      -.|+.||..|.
T Consensus        15 ~~Cp~CG~~F~   25 (26)
T PF10571_consen   15 KFCPHCGYDFE   25 (26)
T ss_pred             CcCCCCCCCCc
Confidence            45777777764

Several members are annotated as putative helicases.

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=83.16  E-value=0.94  Score=26.57  Aligned_cols=25  Identities=28%  Similarity=0.483  Sum_probs=11.5

Q ss_pred             CCccCCCCcccccC----chHHHHHHhhh
Q psy1798         322 KPYECNLCDYKATQ----NSSIHFHMKLK  346 (353)
Q Consensus       322 ~~~~C~~C~~~f~~----~~~l~~H~~~~  346 (353)
                      ....|.+|++.+..    -++|.+|++..
T Consensus        15 ~~a~C~~C~~~~~~~~~~ts~l~~HL~~~   43 (45)
T PF02892_consen   15 KKAKCKYCGKVIKYSSGGTSNLKRHLKKK   43 (45)
T ss_dssp             S-EEETTTTEE-----SSTHHHHHHHHHT
T ss_pred             CeEEeCCCCeEEeeCCCcHHHHHHhhhhh
Confidence            34456666655543    35666666443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=82.93  E-value=0.78  Score=25.73  Aligned_cols=13  Identities=31%  Similarity=0.442  Sum_probs=9.7

Q ss_pred             ceeeCCCCCCccC
Q psy1798         294 IMYRCFVCPYLSR  306 (353)
Q Consensus       294 ~~~~C~~C~~~f~  306 (353)
                      ...+|+.|+..|.
T Consensus        24 ~~vrC~~C~~~f~   36 (37)
T PF13719_consen   24 RKVRCPKCGHVFR   36 (37)
T ss_pred             cEEECCCCCcEee
Confidence            3478888888774

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=82.78  E-value=0.62  Score=38.28  Aligned_cols=44  Identities=25%  Similarity=0.418  Sum_probs=29.2

Q ss_pred             CceeecCCCCCccCchhhhhhHhhhh----------cCCCC-----cccCCCCcccccc
Q psy1798          12 VIMYRCFVCPYLSRHKGDVKKHVRKH----------TGEKP-----YECNLCDYKATQN   55 (353)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~~~h----------~~~~~-----~~C~~C~~~~~~~   55 (353)
                      ++.++||+|+..|.+..-.....+.-          .+..|     ..||.||+++...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            46788999999998876655554421          12233     4699998887655

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=82.62  E-value=1.1  Score=26.28  Aligned_cols=25  Identities=28%  Similarity=0.606  Sum_probs=17.0

Q ss_pred             eeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcc
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDY  331 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  331 (353)
                      |.|..||..|.-.           ...+..|+.||.
T Consensus         3 Y~C~~Cg~~~~~~-----------~~~~irC~~CG~   27 (44)
T smart00659        3 YICGECGRENEIK-----------SKDVVRCRECGY   27 (44)
T ss_pred             EECCCCCCEeecC-----------CCCceECCCCCc
Confidence            7788888877633           235577888875

present in RNA polymerase I, II and III

>PHA00626 hypothetical protein

Probab=81.09  E-value=1.3  Score=27.04  Aligned_cols=15  Identities=27%  Similarity=0.510  Sum_probs=12.1

Q ss_pred             ceeeCCCCCCccCCc
Q psy1798         294 IMYRCFVCPYLSRHK  308 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~  308 (353)
                      ..|+|+.||+.|+..
T Consensus        22 nrYkCkdCGY~ft~~   36 (59)
T PHA00626         22 DDYVCCDCGYNDSKD   36 (59)
T ss_pred             cceEcCCCCCeechh
Confidence            459999999998754

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=80.53  E-value=0.88  Score=26.01  Aligned_cols=31  Identities=19%  Similarity=0.342  Sum_probs=21.0

Q ss_pred             eeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcc
Q psy1798          14 MYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYK   51 (353)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   51 (353)
                      .|+|..||..|........       ...-.|+.||..
T Consensus         5 ~y~C~~Cg~~fe~~~~~~~-------~~~~~CP~Cg~~   35 (41)
T smart00834        5 EYRCEDCGHTFEVLQKISD-------DPLATCPECGGD   35 (41)
T ss_pred             EEEcCCCCCEEEEEEecCC-------CCCCCCCCCCCc
Confidence            5789999998875544321       345679988863

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=80.49  E-value=0.98  Score=26.73  Aligned_cols=32  Identities=19%  Similarity=0.388  Sum_probs=22.5

Q ss_pred             ceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCccccc
Q psy1798          13 IMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQ   54 (353)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~   54 (353)
                      ..|+|+.||..|......          ....|+.||..+..
T Consensus         2 ~~y~C~~CG~~~~~~~~~----------~~~~Cp~CG~~~~~   33 (46)
T PRK00398          2 AEYKCARCGREVELDEYG----------TGVRCPYCGYRILF   33 (46)
T ss_pred             CEEECCCCCCEEEECCCC----------CceECCCCCCeEEE
Confidence            468999999988664332          15789999876543

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=80.46  E-value=0.75  Score=28.05  Aligned_cols=30  Identities=20%  Similarity=0.373  Sum_probs=19.5

Q ss_pred             eeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcc
Q psy1798         295 MYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDY  331 (353)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  331 (353)
                      .|+|..||..|.-...+..       ..+-.|+.||.
T Consensus         5 ey~C~~Cg~~fe~~~~~~~-------~~~~~CP~Cg~   34 (52)
T TIGR02605         5 EYRCTACGHRFEVLQKMSD-------DPLATCPECGG   34 (52)
T ss_pred             EEEeCCCCCEeEEEEecCC-------CCCCCCCCCCC
Confidence            3788888888875543321       34456888885

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=80.14  E-value=1.3  Score=31.75  Aligned_cols=31  Identities=16%  Similarity=0.287  Sum_probs=22.5

Q ss_pred             ccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCccccch
Q psy1798         206 GFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQK  247 (353)
Q Consensus       206 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  247 (353)
                      ...|+.||..|...           +..|..||.||..|...
T Consensus         9 KR~Cp~CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen    9 KRTCPSCGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             cccCCCCcchhccC-----------CCCCccCCCCCCccCcc
Confidence            35688888887655           34678888888887765

The function of members of this family is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	353
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		9e-10
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		3e-06
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		7e-07
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		4e-06
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		4e-06
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		4e-05
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-05
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-05
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-05
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		2e-04
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		2e-04
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-04
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-04
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		2e-04
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-04
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-04
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-04
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		4e-04
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		5e-04
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		5e-04
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		8e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 67/163 (41%), Gaps = 16/163 (9%)
Query: 115 FQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDV 174
           + C  C  S     +   H RTHTG KPY C ECG +     DL +H +R H     E  
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH-QRTHT---GEKP 77
Query: 175 RHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRP 234
             C  C K       + L  H +     +   + C  C     Q AH+R H R HTG +P
Sbjct: 78  YKCPECGKSF--SQRANLRAHQRTHTGEKP--YACPECGKSFSQLAHLRAHQRTHTGEKP 133
Query: 235 FPCDMCEYSAAQKWNLKMHMH-------FLCHHCNR-FGSRDI 269
           + C  C  S +++ NL  H         + C  C + F  RD 
Sbjct: 134 YKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDA 176

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 71/210 (33%), Gaps = 75/210 (35%)
Query: 139 GHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKY 198
           G KPYAC ECG +   S  L +H +R H     E    C  C K   +  +         
Sbjct: 18  GEKPYACPECGKSFSRSDHLAEH-QRTHT---GEKPYKCPECGKSFSDKKD--------- 64
Query: 199 CPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLC 258
                           +TR       H R HTG +P+ C  C  S +Q+ NL+ H     
Sbjct: 65  ----------------LTR-------HQRTHTGEKPYKCPECGKSFSQRANLRAHQ---- 97
Query: 259 HHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSR---HKGDVKKHV 315
                                           R     + + CP   +       ++ H 
Sbjct: 98  --------------------------------RTHTGEKPYACPECGKSFSQLAHLRAHQ 125
Query: 316 RKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
           R HTGEKPY+C  C    ++  ++H H + 
Sbjct: 126 RTHTGEKPYKCPECGKSFSREDNLHTHQRT 155

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 115 FQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDV 174
           ++C  C  S    SN  +H RTHTG KPY C ECG +   S+DL+KH +R H     E  
Sbjct: 5   YKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKH-QRTHT---GEKP 60
Query: 175 RHCVHCNKEMHNLD 188
             C  C K     D
Sbjct: 61  YKCPECGKSFSRSD 74

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 30/147 (20%)
Query: 204 TVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNR 263
           + G +C  C        +++ H RKHTG +PF C  C     +K N              
Sbjct: 5   SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKEN-------------- 50
Query: 264 FGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKP 323
                   L+EH  +  +         R+  ++ C VC    R + +++ H+  HTGE P
Sbjct: 51  --------LLEHEARNCM--------NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMP 94
Query: 324 YECNLCDYKATQNSSIHFHMKLKHNMP 350
           Y+C+ C  +  Q   +  HM   H+ P
Sbjct: 95  YKCSSCSQQFMQKKDLQSHMIKLHSGP 121

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 208 QCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           +C  C    R + ++  HLR HTG +P+ C+ CEY+AAQK +L+ H+
Sbjct: 6   ECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHL 52

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 298 CFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKH 347
           C  C    R    +  H+R HTGEKPY+C  C+Y A Q +S+ +H++  H
Sbjct: 7   CSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH 56

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 47/119 (39%), Gaps = 36/119 (30%)
Query: 113 GWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVE 172
           G  +C  C      +     H+R HTG KPY C  C YA+  S+ L KH+ RIH      
Sbjct: 7   GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL-RIH-----S 60
Query: 173 DVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTG 231
           D R                               F+C +C Y +R S+ +  HLR HTG
Sbjct: 61  DERP------------------------------FKCQICPYASRNSSQLTVHLRSHTG 89

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 33/114 (28%)
Query: 208 QCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSR 267
           +C +C     +   ++ H+R HTG +P+ C  C+Y+AA   +L  H+             
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI----------- 58
Query: 268 DIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGE 321
                  HS            D R    ++C +CPY SR+   +  H+R HTG+
Sbjct: 59  -------HS------------DER---PFKCQICPYASRNSSQLTVHLRSHTGD 90

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
           ++C VC      K  +K H+R HTG KPY+C  CDY A  +SS++ H+++
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI 58

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 207 FQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMH 253
           FQC +C+    +S H+  H+R HTG +PF CD+C    A+    K H
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 50

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 207 FQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMH 253
           FQC +C+    +S H+  H+R HTG +PF CD+C    A+    K H
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 81

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 207 FQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMH 253
           FQC +C+    +S H+  H+R HTG +PF CD+C    A+    K H
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 81

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 207 FQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           FQC +C+    +S H+  H+R HTG +PF CD+C    A+    K H 
Sbjct: 34  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHT 81

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 207 FQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           FQC +C+    +S H+  H+R HTG +PF CD+C    A+    K H 
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHT 82

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 207 FQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMH 253
           FQC +C+    +S H+  H+R HTG +PF CD+C    A+    K H
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 81

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 207 FQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMH 253
           FQC +C+    +S H+  H+R HTG +PF CD+C    A+    K H
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 81

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 207 FQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMH 253
           FQC +C+    +S H+  H+R HTG +PF CD+C    A+    K H
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 81

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
          Y+C  C    R+KG++  H   HTGEKPY CN+C  +  + +++  H ++
Sbjct: 18 YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRI 67

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKL 345
           Y+C  C    R+KG++  H   HTGEKPY CN+C  +  + +++  H ++
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRI 67

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 29/56 (51%)
Query: 9  RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
          +R    Y+C  C     H  D+ KH R HTGEKPY+C+ C     Q S +  H +V
Sbjct: 13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRV 68

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 115 FQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHM 167
           ++C  C  S    S+  +H RTHTG KPY C ECG A I  + L  H  R+H 
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH-HRVHT 70

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	353
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-16
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-11
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-09
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-15
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-15
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-15
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-13
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-12
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-14
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-04
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-12
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	8e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-12
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	9e-10
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	8e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-11
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-09
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-11
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-09
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-09
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-07
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-04
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-09
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-08
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	9e-05
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-05
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-09
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-08
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-08
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	8e-07
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	8e-07
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	8e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	9e-07
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	8e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	9e-07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	8e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	8e-06
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	8e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-05
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	7e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-07
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	9e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-05
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-06
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	9e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-05
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-05
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-06
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-05
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	9e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	9e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	4e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	8e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	8e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	5e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	5e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	3e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	7e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	6e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	6e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	7e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	2e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	5e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 73.3 bits (181), Expect = 3e-16
 Identities = 37/152 (24%), Positives = 52/152 (34%), Gaps = 41/152 (26%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
             C  C      K  +K H RKHTGEKP+EC  C     +  ++  H       +  SE 
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEA--RNCMNRSEQ 65

Query: 75  VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHI 134
           V           +              C  C            FR       R     H+
Sbjct: 66  V-----------FT-------------CSVCQE---------TFRR------RMELRLHM 86

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIH 166
            +HTG  PY C+ C    +   DL+ H+ ++H
Sbjct: 87  VSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 58.7 bits (143), Expect = 5e-11
 Identities = 33/142 (23%), Positives = 49/142 (34%), Gaps = 37/142 (26%)

Query: 115 FQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKH--IERIHMPQFVE 172
            +C  C      +     H R HTG KP+ C +CG       +L +H     ++     E
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS---E 64

Query: 173 DVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGR 232
            V  C  C +       +F                         R+   +R H+  HTG 
Sbjct: 65  QVFTCSVCQE-------TF-------------------------RRRMELRLHMVSHTGE 92

Query: 233 RPFPCDMCEYSAAQKWNLKMHM 254
            P+ C  C     QK +L+ HM
Sbjct: 93  MPYKCSSCSQQFMQKKDLQSHM 114

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 57.1 bits (139), Expect = 2e-10
 Identities = 32/138 (23%), Positives = 48/138 (34%), Gaps = 44/138 (31%)

Query: 217 RQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHH-------CNRFGSRDI 269
               +++ H RKHTG +PF C  C     +K NL  H    C +       C+       
Sbjct: 18  LSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCS------- 70

Query: 270 GDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC 329
                    C                   F      R + +++ H+  HTGE PY+C+ C
Sbjct: 71  --------VCQ----------------ETF------RRRMELRLHMVSHTGEMPYKCSSC 100

Query: 330 DYKATQNSSIHFHMKLKH 347
             +  Q   +  HM   H
Sbjct: 101 SQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 54.0 bits (131), Expect = 2e-09
 Identities = 20/133 (15%), Positives = 33/133 (24%), Gaps = 48/133 (36%)

Query: 37  HTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSATET 96
            +G    EC  C  K      +  H +       T E             +         
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNR-----KHTGEKP-----------F--------- 36

Query: 97  ELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIR---THTGHKPYACTECGYASI 153
                C +C +         C+  +       N L H      +   + + C+ C     
Sbjct: 37  ----ECPKCGK---------CYFRK------ENLLEHEARNCMNRSEQVFTCSVCQETFR 77

Query: 154 LSTDLRKHIERIH 166
              +LR H    H
Sbjct: 78  RRMELRLH-MVSH 89

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 44.4 bits (106), Expect = 4e-06
 Identities = 17/49 (34%), Positives = 22/49 (44%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
             C  C      K  +K H RKHTGEKP+EC  C     +  ++  H  
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEA 56

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 71.3 bits (176), Expect = 7e-15
 Identities = 56/229 (24%), Positives = 73/229 (31%), Gaps = 80/229 (34%)

Query: 25  RHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCV 84
                         GEKPY C  C    +++  +  H     Q   T E           
Sbjct: 4   FGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEH-----QRTHTGEKP--------- 49

Query: 85  HCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYA 144
             Y              C +C          + F        + +  RH RTHTG KPY 
Sbjct: 50  --Y-------------KCPECG---------KSFSD------KKDLTRHQRTHTGEKPYK 79

Query: 145 CTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRT 204
           C ECG +     +LR H +R H     E    C  C K       SF             
Sbjct: 80  CPECGKSFSQRANLRAH-QRTHT---GEKPYACPECGK-------SF------------- 115

Query: 205 VGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMH 253
                        Q AH+R H R HTG +P+ C  C  S +++ NL  H
Sbjct: 116 ------------SQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTH 152

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 70.9 bits (175), Expect = 7e-15
 Identities = 51/223 (22%), Positives = 72/223 (32%), Gaps = 83/223 (37%)

Query: 127 RSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHN 186
            S+ +       G KPYAC ECG +   S  L +H +R H     E    C  C K    
Sbjct: 6   SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEH-QRTHTG---EKPYKCPECGK---- 57

Query: 187 LDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQ 246
              SF                              + +H R HTG +P+ C  C  S +Q
Sbjct: 58  ---SF-------------------------SDKKDLTRHQRTHTGEKPYKCPECGKSFSQ 89

Query: 247 KWNLKMH--MH-----FLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCF 299
           + NL+ H   H     + C  C +                                   F
Sbjct: 90  RANLRAHQRTHTGEKPYACPECGK----------------------------------SF 115

Query: 300 VCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                      ++ H R HTGEKPY+C  C    ++  ++H H
Sbjct: 116 ------SQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTH 152

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 70.9 bits (175), Expect = 9e-15
 Identities = 55/223 (24%), Positives = 77/223 (34%), Gaps = 83/223 (37%)

Query: 127 RSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHN 186
             +   H RTHTG KPY C ECG +     DL +H +R H     E    C  C K    
Sbjct: 34  SDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH-QRTHT---GEKPYKCPECGK---- 85

Query: 187 LDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQ 246
              SF                          Q A++R H R HTG +P+ C  C  S +Q
Sbjct: 86  ---SF-------------------------SQRANLRAHQRTHTGEKPYACPECGKSFSQ 117

Query: 247 KWNLKMH--MH-----FLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCF 299
             +L+ H   H     + C  C                                   + F
Sbjct: 118 LAHLRAHQRTHTGEKPYKCPECG----------------------------------KSF 143

Query: 300 VCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                   + ++  H R HTGEKPY+C  C    ++  +++ H
Sbjct: 144 ------SREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 67.5 bits (166), Expect = 1e-13
 Identities = 60/239 (25%), Positives = 79/239 (33%), Gaps = 80/239 (33%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
           Y C  C         + +H R HTGEKPY+C  C    +    +  H     Q   T E 
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH-----QRTHTGEK 76

Query: 75  VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHI 134
                       Y              C +C          + F  R      +N   H 
Sbjct: 77  P-----------Y-------------KCPECG---------KSFSQR------ANLRAHQ 97

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLK 194
           RTHTG KPYAC ECG +      LR H +R H     E    C  C K       SF   
Sbjct: 98  RTHTGEKPYACPECGKSFSQLAHLRAH-QRTHT---GEKPYKCPECGK-------SF--- 143

Query: 195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMH 253
                                  +  ++  H R HTG +P+ C  C  S +++  L +H
Sbjct: 144 ----------------------SREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 64.0 bits (157), Expect = 3e-12
 Identities = 41/152 (26%), Positives = 53/152 (34%), Gaps = 45/152 (29%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
           Y+C  C      + +++ H R HTGEKPY C  C    +Q + +  H     Q   T E 
Sbjct: 78  YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAH-----QRTHTGEK 132

Query: 75  VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHI 134
                       Y              C +C          + F          N   H 
Sbjct: 133 P-----------Y-------------KCPECG---------KSFSRE------DNLHTHQ 153

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIH 166
           RTHTG KPY C ECG +      L  H +R H
Sbjct: 154 RTHTGEKPYKCPECGKSFSRRDALNVH-QRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 49.7 bits (120), Expect = 2e-07
 Identities = 32/138 (23%), Positives = 49/138 (35%), Gaps = 29/138 (21%)

Query: 217 RQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM--H-----FLCHHCNRFGSRDI 269
             S+          G +P+ C  C  S ++  +L  H   H     + C  C +  S   
Sbjct: 4   FGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD-K 62

Query: 270 GDLIEHSTQCSVMGIAYLNDRRNVIM-----YRCFVCPYLSRHKGDVKKHVRKHTGEKPY 324
            DL  H              +R         Y+C  C      + +++ H R HTGEKPY
Sbjct: 63  KDLTRH--------------QR--THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPY 106

Query: 325 ECNLCDYKATQNSSIHFH 342
            C  C    +Q + +  H
Sbjct: 107 ACPECGKSFSQLAHLRAH 124

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 68.9 bits (169), Expect = 2e-14
 Identities = 37/215 (17%), Positives = 50/215 (23%), Gaps = 86/215 (40%)

Query: 128 SNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIH------MPQFVEDVRHCVHCN 181
              L                C        +L  H+  +           V     C    
Sbjct: 11  KQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHV-TMEHVGGPEQNNHVCYWEECPREG 69

Query: 182 KEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDM-- 239
           K       SF                         +    +  H+R HTG +PFPC    
Sbjct: 70  K-------SF-------------------------KAKYKLVNHIRVHTGEKPFPCPFPG 97

Query: 240 CEYSAAQKWNLKMHM--H-----FLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRN 292
           C    A+  NLK+H   H     F C                    C             
Sbjct: 98  CGKIFARSENLKIHKRTHTGEKPFKCEF----------------EGCD------------ 129

Query: 293 VIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 327
               R F       +  D KKH+  HT +K    +
Sbjct: 130 ----RRF------ANSSDRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 52.7 bits (127), Expect = 1e-08
 Identities = 26/136 (19%), Positives = 37/136 (27%), Gaps = 38/136 (27%)

Query: 33  HVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSS 92
                  +       CD   +    +  H+      +         G     H       
Sbjct: 16  CKWIDEAQLSRPKKSCDRTFSTMHELVTHVT-----MEHVG-----GPEQNNHVCY---- 61

Query: 93  ATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACT--ECGY 150
                                W +C R   S K +   + HIR HTG KP+ C    CG 
Sbjct: 62  ---------------------WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGK 100

Query: 151 ASILSTDLRKHIERIH 166
               S +L+ H  R H
Sbjct: 101 IFARSENLKIHK-RTH 115

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 24/124 (19%), Positives = 39/124 (31%), Gaps = 44/124 (35%)

Query: 25  RHKGDVKKHVRKHTGEKPYECNLCD-YKA-TQNSSIHFHMKVGVQAIFTSENVVLSGLHS 82
           + K  +  H+R HTGEKP+ C      K   ++ ++  H +       T E         
Sbjct: 73  KAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKR-----THTGEK-----PFK 122

Query: 83  CVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKP 142
           C                     C R             R++N   S+  +H+  HT  K 
Sbjct: 123 CEF-----------------EGCDR-------------RFANS--SDRKKHMHVHTSDKS 150

Query: 143 YACT 146
              +
Sbjct: 151 GPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 19/122 (15%), Positives = 35/122 (28%), Gaps = 26/122 (21%)

Query: 224 QHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMG 283
                   +   P   C+ + +    L  H+     H       +     E   +     
Sbjct: 15  SCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTM--EHVGGPEQNNHVCYWEECPREG--- 69

Query: 284 IAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCD-YKA-TQNSSIHF 341
                        + F      + K  +  H+R HTGEKP+ C      K   ++ ++  
Sbjct: 70  -------------KSF------KAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKI 110

Query: 342 HM 343
           H 
Sbjct: 111 HK 112

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 62.4 bits (153), Expect = 1e-12
 Identities = 25/130 (19%), Positives = 40/130 (30%), Gaps = 45/130 (34%)

Query: 37  HTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSATET 96
                P++C +C    ++   +  HM+                 H+ V  Y         
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRC----------------HTGVKPY--------- 37

Query: 97  ELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILST 156
                C  C                      S+  +H+R H+  +P+ C  C YAS  S+
Sbjct: 38  ----KCKTCDY---------AAADS------SSLNKHLRIHSDERPFKCQICPYASRNSS 78

Query: 157 DLRKHIERIH 166
            L  H  R H
Sbjct: 79  QLTVH-LRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 54.0 bits (131), Expect = 1e-09
 Identities = 32/123 (26%), Positives = 40/123 (32%), Gaps = 36/123 (29%)

Query: 115 FQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDV 174
            +C  C      +     H+R HTG KPY C  C YA+  S+ L KH  RIH     E  
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKH-LRIHSD---ERP 64

Query: 175 RHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRP 234
             C  C         +                          R S+ +  HLR HTG   
Sbjct: 65  FKCQICPY-------AS-------------------------RNSSQLTVHLRSHTGDSG 92

Query: 235 FPC 237
              
Sbjct: 93  PSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 53.6 bits (130), Expect = 1e-09
 Identities = 32/131 (24%), Positives = 45/131 (34%), Gaps = 44/131 (33%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
           ++C VC      K  +K H+R HTG KPY+C  CDY A  +SS++ H       I + E 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKH-----LRIHSDER 63

Query: 75  VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHI 134
                       +              C  C             R        S    H+
Sbjct: 64  P-----------F-------------KCQICPY---------ASRN------SSQLTVHL 84

Query: 135 RTHTGHKPYAC 145
           R+HTG    + 
Sbjct: 85  RSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 51.3 bits (124), Expect = 8e-09
 Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 36/119 (30%)

Query: 136 THTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKH 195
           +     P+ C  CG        L+ H  R H          C  C+        +     
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTH-MRCHT---GVKPYKCKTCDY-------AA---- 46

Query: 196 CKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
                                  S+ + +HLR H+  RPF C +C Y++     L +H+
Sbjct: 47  ---------------------ADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHL 84

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 47.8 bits (115), Expect = 1e-07
 Identities = 15/49 (30%), Positives = 29/49 (59%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
           Y+C  C Y +     + KH+R H+ E+P++C +C Y +  +S +  H++
Sbjct: 37  YKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLR 85

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 47.4 bits (114), Expect = 2e-07
 Identities = 21/49 (42%), Positives = 31/49 (63%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
           ++C VC      K  +K H+R HTG KPY+C  CDY A  +SS++ H++
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR 57

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 23/117 (19%), Positives = 37/117 (31%), Gaps = 47/117 (40%)

Query: 217 RQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM--H-----FLCHHCNRFGSRDI 269
            +   ++ H+R HTG +P+ C  C+Y+AA   +L  H+  H     F C  C        
Sbjct: 19  SRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICP------- 71

Query: 270 GDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYEC 326
                                               R+   +  H+R HTG+     
Sbjct: 72  ---------------------------YAS------RNSSQLTVHLRSHTGDSGPSS 95

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 59.8 bits (146), Expect = 7e-12
 Identities = 23/122 (18%), Positives = 31/122 (25%), Gaps = 40/122 (32%)

Query: 28  GDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCY 87
           G      R HTGEKPY C+ CD    Q   +  H K      +          +     +
Sbjct: 1   GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFK-----RYHDP-------NFVPAAF 48

Query: 88  GDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTE 147
                         C +C +          F        R+   RH     G        
Sbjct: 49  V-------------CSKCGK---------TFTR------RNTMARHADNCAGPDGVEGEN 80

Query: 148 CG 149
            G
Sbjct: 81  SG 82

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 54.1 bits (131), Expect = 9e-10
 Identities = 23/113 (20%), Positives = 31/113 (27%), Gaps = 34/113 (30%)

Query: 129 NFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHM-PQFVEDVRHCVHCNKEMHNL 187
           +     RTHTG KPYAC+ C         L  H  + +  P FV     C  C K     
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMH-FKRYHDPNFVPAAFVCSKCGK----- 55

Query: 188 DESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC 240
             +F                          +   M +H     G      +  
Sbjct: 56  --TF-------------------------TRRNTMARHADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 19/109 (17%), Positives = 28/109 (25%), Gaps = 29/109 (26%)

Query: 221 HMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCS 280
                 R HTG +P+ C  C+ +  QK  L MH     +H   F                
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKR--YHDPNFVPAA------------ 47

Query: 281 VMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC 329
                          + C  C      +  + +H     G    E    
Sbjct: 48  ---------------FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 42.9 bits (102), Expect = 7e-06
 Identities = 15/36 (41%), Positives = 17/36 (47%)

Query: 309 GDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
           G      R HTGEKPY C+ CD    Q   +  H K
Sbjct: 1   GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFK 36

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 42.5 bits (101), Expect = 8e-06
 Identities = 7/56 (12%), Positives = 18/56 (32%), Gaps = 5/56 (8%)

Query: 115 FQCFRCRYSNKFRSNFLRHIRTHTG----HKPYACTECGYASILSTDLRKHIERIH 166
           + C  C  + + +     H + +         + C++CG        + +H     
Sbjct: 16  YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH-ADNC 70

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 5/34 (14%), Positives = 9/34 (26%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC 48
          + C  C      +  + +H     G    E    
Sbjct: 48 FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS 81

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 16/49 (32%), Positives = 26/49 (53%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 63
           +C  C Y    K  ++ H R H  ++P++CN C +   Q S++  HMK
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 16/49 (32%), Positives = 26/49 (53%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
            +C  C Y    K  ++ H R H  ++P++CN C +   Q S++  HMK
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 18/48 (37%), Positives = 22/48 (45%)

Query: 207 FQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
            +C  C Y     A +R H R H   RPF C+ C +   Q  NL  HM
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM 57

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 54.8 bits (133), Expect = 3e-10
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 115 FQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
            +C  C YS   ++    H R H   +P+ C  C + +   ++L KH+ +  
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM-KKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 22/106 (20%), Positives = 35/106 (33%), Gaps = 42/106 (39%)

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIHM---PQFVEDVRHCVHCNKEMHNLDESF 191
            + +   P  C+EC Y+      LR H ERIH    P                       
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIH-ERIHCTDRP----------------------- 37

Query: 192 LLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPC 237
                          F+C  C + T+Q +++ +H++K  G    P 
Sbjct: 38  ---------------FKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 48.3 bits (116), Expect = 6e-08
 Identities = 15/112 (13%), Positives = 31/112 (27%), Gaps = 44/112 (39%)

Query: 35  RKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSAT 94
              +   P +C+ C Y  +  +++  H +     I  ++                     
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHER-----IHCTDR-------------------- 36

Query: 95  ETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACT 146
                            P  F+C  C +  K  SN  +H++   G      +
Sbjct: 37  -----------------P--FKCNYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 47.9 bits (115), Expect = 8e-08
 Identities = 17/100 (17%), Positives = 31/100 (31%), Gaps = 33/100 (33%)

Query: 227 RKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAY 286
              +   P  C  C YS + K  L++H      HC     R                   
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERI---HC---TDRP------------------ 37

Query: 287 LNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYEC 326
                    ++C  C + ++   ++ KH++K  G+     
Sbjct: 38  ---------FKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 46.0 bits (110), Expect = 4e-07
 Identities = 5/28 (17%), Positives = 12/28 (42%)

Query: 316 RKHTGEKPYECNLCDYKATQNSSIHFHM 343
              +   P +C+ C Y  +  +++  H 
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHE 29

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 58.2 bits (142), Expect = 5e-11
 Identities = 25/136 (18%), Positives = 39/136 (28%), Gaps = 45/136 (33%)

Query: 32  KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLS 91
                   +K + C  C    T++ ++  H     +   T E             Y    
Sbjct: 7   GGRLPSKTKKEFICKFCGRHFTKSYNLLIH-----ERTHTDERP-----------Y---- 46

Query: 92  SATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYA 151
                     C  C +          FR +       +   H   H+  KP+ C ECG  
Sbjct: 47  ---------TCDICHK---------AFRRQ------DHLRDHRYIHSKEKPFKCQECGKG 82

Query: 152 SILSTDLRKHIERIHM 167
              S  L  H + +HM
Sbjct: 83  FCQSRTLAVH-KTLHM 97

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 53.6 bits (130), Expect = 2e-09
 Identities = 28/127 (22%), Positives = 37/127 (29%), Gaps = 36/127 (28%)

Query: 128 SNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNL 187
           S            K + C  CG     S +L  H ER H     E    C  C+K     
Sbjct: 3   SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIH-ERTHT---DERPYTCDICHK----- 53

Query: 188 DESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQK 247
             +F                         R+  H+R H   H+  +PF C  C     Q 
Sbjct: 54  --AF-------------------------RRQDHLRDHRYIHSKEKPFKCQECGKGFCQS 86

Query: 248 WNLKMHM 254
             L +H 
Sbjct: 87  RTLAVHK 93

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 48.6 bits (117), Expect = 1e-07
 Identities = 26/111 (23%), Positives = 28/111 (25%), Gaps = 36/111 (32%)

Query: 127 RSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHN 186
             N L H RTHT  +PY C  C  A      LR H   IH     E    C  C K    
Sbjct: 30  SYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH-RYIHS---KEKPFKCQECGK---- 81

Query: 187 LDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPC 237
               F                          QS  +  H   H        
Sbjct: 82  ---GF-------------------------CQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 42.8 bits (102), Expect = 1e-05
 Identities = 21/133 (15%), Positives = 34/133 (25%), Gaps = 46/133 (34%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKA-TQNSSIHFHMKVGVQAIFTSE 73
           + C  C        ++  H R HT E+PY C++C  KA  +   +  H     + I + E
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICH-KAFRRQDHLRDH-----RYIHSKE 71

Query: 74  NVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRH 133
                        +              C +C +          F              H
Sbjct: 72  KP-----------F-------------KCQECGK---------GFCQ------SRTLAVH 92

Query: 134 IRTHTGHKPYACT 146
              H         
Sbjct: 93  KTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 40.5 bits (96), Expect = 6e-05
 Identities = 22/134 (16%), Positives = 39/134 (29%), Gaps = 49/134 (36%)

Query: 219 SAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM--H-----FLCHHCNRFGSRDIGD 271
           S+           ++ F C  C     + +NL +H   H     + C  C          
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDIC---------- 51

Query: 272 LIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDY 331
                        A+                   R +  ++ H   H+ EKP++C  C  
Sbjct: 52  -----------HKAF-------------------RRQDHLRDHRYIHSKEKPFKCQECG- 80

Query: 332 KA-TQNSSIHFHMK 344
           K   Q+ ++  H  
Sbjct: 81  KGFCQSRTLAVHKT 94

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 39.3 bits (93), Expect = 2e-04
 Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 49/119 (41%)

Query: 217 RQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMH--MH-----FLCHHCNR-FGSRD 268
            +S ++  H R HT  RP+ CD+C  +  ++ +L+ H  +H     F C  C + F    
Sbjct: 28  TKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGF---- 83

Query: 269 IGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 327
                    Q                         L+ HK         H         
Sbjct: 84  --------CQSR----------------------TLAVHK-------TLHMQTSSPTAA 105

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 57.9 bits (141), Expect = 7e-11
 Identities = 33/146 (22%), Positives = 52/146 (35%), Gaps = 49/146 (33%)

Query: 25  RHKGDVKKHVRKHTGEKPYECNL--CDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHS 82
                ++ H RKHTGEKPY+C+   C+ + +++  +  H +                 H+
Sbjct: 19  FKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR----------------HT 62

Query: 83  CVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKP 142
            V  +              C  C R          F          +   H RTHTG KP
Sbjct: 63  GVKPF-------------QCKTCQR---------KFSRS------DHLKTHTRTHTGEKP 94

Query: 143 YAC--TECGYASILSTDLRKHIERIH 166
           ++C    C      S +L +H   +H
Sbjct: 95  FSCRWPSCQKKFARSDELVRH-HNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 54.1 bits (131), Expect = 2e-09
 Identities = 32/139 (23%), Positives = 45/139 (32%), Gaps = 51/139 (36%)

Query: 217 RQSAHMRQHLRKHTGRRPFPCDMCEYSAA--QKWNLKMHM--H-----FLCHHCNRFGSR 267
            + +H++ H RKHTG +P+ CD  +      +   LK H   H     F C  C R    
Sbjct: 19  FKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQR---- 74

Query: 268 DIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 327
                                          F           +K H R HTGEKP+ C 
Sbjct: 75  ------------------------------KF------SRSDHLKTHTRTHTGEKPFSCR 98

Query: 328 L--CDYKATQNSSIHFHMK 344
              C  K  ++  +  H  
Sbjct: 99  WPSCQKKFARSDELVRHHN 117

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 52.1 bits (126), Expect = 7e-09
 Identities = 33/132 (25%), Positives = 45/132 (34%), Gaps = 40/132 (30%)

Query: 127 RSNFLRHIRTHTGHKPYACT--ECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEM 184
            S+   H R HTG KPY C   +C      S  L++H +R H          C  C +  
Sbjct: 21  LSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRH-QRRHTG---VKPFQCKTCQR-- 74

Query: 185 HNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDM--CEY 242
                 F                          +S H++ H R HTG +PF C    C+ 
Sbjct: 75  -----KF-------------------------SRSDHLKTHTRTHTGEKPFSCRWPSCQK 104

Query: 243 SAAQKWNLKMHM 254
             A+   L  H 
Sbjct: 105 KFARSDELVRHH 116

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 26/131 (19%), Positives = 38/131 (29%), Gaps = 45/131 (34%)

Query: 38  TGEKPYECN--LCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSATE 95
           + ++P+ C    C+ +  + S +  H +       T E       + C            
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSR-----KHTGEK-----PYQC------------ 39

Query: 96  TELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILS 155
                    C R          F             RH R HTG KP+ C  C      S
Sbjct: 40  -----DFKDCER---------RFSRS------DQLKRHQRRHTGVKPFQCKTCQRKFSRS 79

Query: 156 TDLRKHIERIH 166
             L+ H  R H
Sbjct: 80  DHLKTHT-RTH 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 43.3 bits (103), Expect = 1e-05
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL--CDYKATQNSSIHFHMKV 64
           ++C  C         +K H R HTGEKP+ C    C  K  ++  +  H  +
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM 118

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 56.3 bits (137), Expect = 1e-10
 Identities = 23/132 (17%), Positives = 35/132 (26%), Gaps = 46/132 (34%)

Query: 37  HTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSATET 96
            +G     C +C         ++ H         + E                       
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKL-----SHSGEK---------------------- 34

Query: 97  ELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTG--HKPYACTECGYASIL 154
                          P  + C  C    K +     H+R+H G   KPY C  CG     
Sbjct: 35  ---------------P--YSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSR 77

Query: 155 STDLRKHIERIH 166
              L  HI+++H
Sbjct: 78  PDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 22/121 (18%), Positives = 34/121 (28%), Gaps = 38/121 (31%)

Query: 137 HTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHC 196
            +G    AC  CG        L +H +  H     E    C  C          F     
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRH-KLSHSG---EKPYSCPVCGL-------RF----- 45

Query: 197 KYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTG--RRPFPCDMCEYSAAQKWNLKMHM 254
                               ++   M  H+R H G   +P+ C  C    ++  +L  H+
Sbjct: 46  --------------------KRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHI 85

Query: 255 H 255
            
Sbjct: 86  K 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
            C +C  + R    + +H   H+GEKPY C +C  +  +   + +H++ 
Sbjct: 8  VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS 57

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 41.3 bits (98), Expect = 3e-05
 Identities = 13/49 (26%), Positives = 25/49 (51%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
             C +C  + R    + +H   H+GEKPY C +C  +  +   + +H++
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR 56

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 38.2 bits (90), Expect = 3e-04
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGE--KPYECNLCDYKATQNSSIHFHMKLKH 347
           Y C VC    + K  +  HVR H G   KPY C  C    ++   ++ H+K  H
Sbjct: 36  YSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 37.5 bits (88), Expect = 7e-04
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGE--KPYECNLCDYKATQNSSIHFHMK 63
          Y C VC    + K  +  HVR H G   KPY C  C    ++   ++ H+K
Sbjct: 36 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIK 86

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 53.3 bits (129), Expect = 4e-09
 Identities = 32/144 (22%), Positives = 49/144 (34%), Gaps = 46/144 (31%)

Query: 25  RHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCV 84
           R    ++KH+  H G + + C  C     ++S +  H  V                H+  
Sbjct: 18  RDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLV----------------HTGE 60

Query: 85  HCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYA 144
             +                QC+ + C  G  + F          N   H+R HTG +PY 
Sbjct: 61  KPF----------------QCTFEGC--G--KRFSLD------FNLRTHVRIHTGDRPYV 94

Query: 145 C--TECGYASILSTDLRKHIERIH 166
           C    C      ST+L+ HI   H
Sbjct: 95  CPFDGCNKKFAQSTNLKSHI-LTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 50.2 bits (121), Expect = 4e-08
 Identities = 32/135 (23%), Positives = 50/135 (37%), Gaps = 47/135 (34%)

Query: 127 RSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHN 186
            S   +H+ TH G + + C ECG A + S+ L++H + +H                    
Sbjct: 20  NSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRH-QLVH-------------------- 57

Query: 187 LDESFLLKHCKYCPSLRTVGFQCYLCLYIT-----RQSAHMRQHLRKHTGRRPFPCDM-- 239
                              G + + C +           ++R H+R HTG RP+ C    
Sbjct: 58  ------------------TGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDG 99

Query: 240 CEYSAAQKWNLKMHM 254
           C    AQ  NLK H+
Sbjct: 100 CNKKFAQSTNLKSHI 114

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 45.6 bits (109), Expect = 2e-06
 Identities = 31/137 (22%), Positives = 48/137 (35%), Gaps = 48/137 (35%)

Query: 217 RQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM--H-----FLCHHCNRFGSRDI 269
           R ++ MR+HL  H G R   C  C  +  +   LK H   H     F C           
Sbjct: 18  RDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF--------- 67

Query: 270 GDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL- 328
                    C                 + F          +++ HVR HTG++PY C   
Sbjct: 68  -------EGCG----------------KRF------SLDFNLRTHVRIHTGDRPYVCPFD 98

Query: 329 -CDYKATQNSSIHFHMK 344
            C+ K  Q++++  H+ 
Sbjct: 99  GCNKKFAQSTNLKSHIL 115

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 44.0 bits (105), Expect = 5e-06
 Identities = 32/196 (16%), Positives = 55/196 (28%), Gaps = 86/196 (43%)

Query: 141 KPYACT--ECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKY 198
           +  AC    C      ++ +RKH    H       V  C  C K       +F       
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKH-LHTHG----PRVHVCAECGK-------AF------- 44

Query: 199 CPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDM--CEYSAAQKWNLKMHM-- 254
                              +S+ +++H   HTG +PF C    C    +  +NL+ H+  
Sbjct: 45  ------------------VESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRI 86

Query: 255 H-----FLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKG 309
           H     ++C                    C+                + F          
Sbjct: 87  HTGDRPYVCPF----------------DGCN----------------KKF------AQST 108

Query: 310 DVKKHVRKHTGEKPYE 325
           ++K H+  H   K  +
Sbjct: 109 NLKSHILTHAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 40.6 bits (96), Expect = 9e-05
 Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 44/131 (33%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL--CDYKATQNSSIHFHMKVGVQAIFTS 72
           + C  C         +K+H   HTGEKP++C    C  + + + ++  H++     I T 
Sbjct: 35  HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-----IHTG 89

Query: 73  ENVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLR 132
           +       + C                     C++          F         +N   
Sbjct: 90  DR-----PYVCPF-----------------DGCNK---------KFAQ------STNLKS 112

Query: 133 HIRTHTGHKPY 143
           HI TH   K  
Sbjct: 113 HILTHAKAKNN 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 54.1 bits (131), Expect = 4e-09
 Identities = 30/162 (18%), Positives = 43/162 (26%), Gaps = 52/162 (32%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRK---HTGEKPYECNLCDYKA-----TQNSSIHFHMKVGV 66
            R   C      +  +  H+     H   K + C+                +  HM+   
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR--- 60

Query: 67  QAIFTSENVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKF 126
               T E       H C                     C +          +        
Sbjct: 61  --RHTGEK-----PHKC-----------------TFEGCRK---------SYSRL----- 82

Query: 127 RSNFLRHIRTHTGHKPYACTE--CGYASILSTDLRKHIERIH 166
             N   H+R+HTG KPY C    C  A   ++D  KH  R H
Sbjct: 83  -ENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 52.2 bits (126), Expect = 2e-08
 Identities = 45/216 (20%), Positives = 65/216 (30%), Gaps = 78/216 (36%)

Query: 141 KPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCP 200
                  C         L  HI   H           +H  ++            C +  
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEH-----------IHGERKEF---------VCHWG- 40

Query: 201 SLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDM--CEYSAAQKWNLKMHM--H- 255
                   C   L   +    +  H+R+HTG +P  C    C  S ++  NLK H+  H 
Sbjct: 41  -------GCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHT 93

Query: 256 ----FLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDV 311
               ++C H                  CS                + F       +  D 
Sbjct: 94  GEKPYMCEH----------------EGCS----------------KAF------SNASDR 115

Query: 312 KKH-VRKHTGEKPYECNL--CDYKATQNSSIHFHMK 344
            KH  R H+ EKPY C L  C  + T  SS+  H+K
Sbjct: 116 AKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 43.7 bits (104), Expect = 1e-05
 Identities = 23/129 (17%), Positives = 38/129 (29%), Gaps = 39/129 (30%)

Query: 40  EKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSATETELL 99
           E     + C  +      +  H+    + I             C                
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHIN--SEHIHGER-----KEFVCHWG------------- 40

Query: 100 DHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACT--ECGYASILSTD 157
             C +  R          F+ +Y        + H+R HTG KP+ CT   C  +     +
Sbjct: 41  -GCSRELR---------PFKAQY------MLVVHMRRHTGEKPHKCTFEGCRKSYSRLEN 84

Query: 158 LRKHIERIH 166
           L+ H+ R H
Sbjct: 85  LKTHL-RSH 92

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 27/147 (18%), Positives = 39/147 (26%), Gaps = 55/147 (37%)

Query: 218 QSAHMRQHLRK---HTGRRPFPCDMCEYSAA-----QKWNLKMHM--H-----FLCHHCN 262
               +  H+     H  R+ F C     S        ++ L +HM  H       C    
Sbjct: 15  SQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFE- 73

Query: 263 RFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEK 322
                           C                 + +          ++K H+R HTGEK
Sbjct: 74  ---------------GCR----------------KSY------SRLENLKTHLRSHTGEK 96

Query: 323 PYECN--LCDYKATQNSSIHFHMKLKH 347
           PY C    C    +  S    H    H
Sbjct: 97  PYMCEHEGCSKAFSNASDRAKHQNRTH 123

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 54.5 bits (132), Expect = 5e-09
 Identities = 28/146 (19%), Positives = 48/146 (32%), Gaps = 45/146 (30%)

Query: 25  RHKGDVKKHVRKHTGEKPYECN--LCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHS 82
                + +H   HTGEK + C+   CD + T  +++  H        F +       ++ 
Sbjct: 55  TSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFN-----RFHNIK---ICVYV 106

Query: 83  CVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKP 142
           C                 H   C +          F+        +    H  +HT   P
Sbjct: 107 C-----------------HFENCGK---------AFKKH------NQLKVHQFSHTQQLP 134

Query: 143 YACTE--CGYASILSTDLRKHIERIH 166
           Y C    C     L + L++H E++H
Sbjct: 135 YECPHEGCDKRFSLPSRLKRH-EKVH 159

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 46.0 bits (110), Expect = 3e-06
 Identities = 27/147 (18%), Positives = 42/147 (28%), Gaps = 48/147 (32%)

Query: 25  RHKGDVKKHVRKHTGEK--PYECNL--CDYKA-TQNSSIHFHMKVGVQAIFTSENVVLSG 79
             K ++KKH  +    K   Y C+   C  KA  +++ +  H     Q   T +      
Sbjct: 85  TTKANMKKHFNRFHNIKICVYVCHFENCG-KAFKKHNQLKVH-----QFSHTQQL----- 133

Query: 80  LHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTG 139
            + C H                   C +          F         S   RH + H G
Sbjct: 134 PYECPHE-----------------GCDK---------RFSLP------SRLKRHEKVHAG 161

Query: 140 HKPYACTECGYASILSTDLRKHIERIH 166
           +       C +     T   KH+   H
Sbjct: 162 YPCKKDDSCSFVGKTWTLYLKHVAECH 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 23/136 (16%), Positives = 42/136 (30%), Gaps = 44/136 (32%)

Query: 127 RSNFLRHIRTHTGHKPYACTE--CGYASILSTDLRKHIERIH----MPQFVEDVRHCVHC 180
             +  RH  THTG K + C    C        +++KH         +  +V    +C   
Sbjct: 57  LHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKH-FNRFHNIKICVYVCHFENC--- 112

Query: 181 NKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPC--D 238
                   ++F                         ++   ++ H   HT + P+ C  +
Sbjct: 113 -------GKAF-------------------------KKHNQLKVHQFSHTQQLPYECPHE 140

Query: 239 MCEYSAAQKWNLKMHM 254
            C+   +    LK H 
Sbjct: 141 GCDKRFSLPSRLKRHE 156

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 23/135 (17%), Positives = 38/135 (28%), Gaps = 49/135 (36%)

Query: 224 QHLRKHTGRRPFPCDMCEYSAA--QKWNLKMHM--H-----FLCHHCNRFGSRDIGDLIE 274
                    + + C   +  AA  + W L+ H+  H     F C                
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEG------------ 49

Query: 275 HSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN--LCDYK 332
               C                 + F           + +H   HTGEK + C+   CD +
Sbjct: 50  ----CE----------------KGF------TSLHHLTRHSLTHTGEKNFTCDSDGCDLR 83

Query: 333 ATQNSSIHFHMKLKH 347
            T  +++  H    H
Sbjct: 84  FTTKANMKKHFNRFH 98

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 31/135 (22%), Positives = 43/135 (31%), Gaps = 39/135 (28%)

Query: 217 RQSAHMRQHLRKHTGRRPFPCD--MCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIE 274
               H+ +H   HTG + F CD   C+     K N+K H +    H  +           
Sbjct: 55  TSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNR--FHNIKICV-------- 104

Query: 275 HSTQCSVMGIAYLNDRRNVIMYRCFV--CPYLSRHKGDVKKHVRKHTGEKPYECN--LCD 330
                                Y C    C    +    +K H   HT + PYEC    CD
Sbjct: 105 ---------------------YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCD 143

Query: 331 YKA-TQNSSIHFHMK 344
            K  +  S +  H K
Sbjct: 144 -KRFSLPSRLKRHEK 157

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 18/52 (34%), Positives = 25/52 (48%)

Query: 115 FQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
           F C  C  +   + +  RH R+HT  KPY C  C  A      L +H ++IH
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 18/52 (34%), Positives = 26/52 (50%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKH 347
           + C VC      +  +K+H R HT EKPY C LC+   T+   +  H +  H
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 39.8 bits (94), Expect = 5e-05
 Identities = 17/49 (34%), Positives = 25/49 (51%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 63
          + C VC      +  +K+H R HT EKPY C LC+   T+   +  H +
Sbjct: 3  FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ 51

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 49.8 bits (120), Expect = 3e-08
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 115 FQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
           FQC  C  +     +   HIRTHTG KP+AC  CG     S + ++H  +IH
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHT-KIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 49.8 bits (120), Expect = 3e-08
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 128 SNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
            +  RHIR HTG KP+ C  C      S  L  HI R H
Sbjct: 20  GSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTH 57

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 45.5 bits (109), Expect = 8e-07
 Identities = 15/50 (30%), Positives = 26/50 (52%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
          ++C +C         +  H+R HTGEKP+ C++C  K  ++     H K+
Sbjct: 35 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKI 84

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 45.5 bits (109), Expect = 8e-07
 Identities = 15/49 (30%), Positives = 25/49 (51%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
           ++C +C         +  H+R HTGEKP+ C++C  K  ++     H K
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTK 83

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 42.8 bits (102), Expect = 8e-06
 Identities = 11/39 (28%), Positives = 24/39 (61%)

Query: 26 HKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
            G + +H+R HTG+KP++C +C    +++  +  H++ 
Sbjct: 18 QSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 56

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 42.5 bits (101), Expect = 9e-06
 Identities = 11/38 (28%), Positives = 24/38 (63%)

Query: 307 HKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
             G + +H+R HTG+KP++C +C    +++  +  H++
Sbjct: 18  QSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR 55

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 40.5 bits (96), Expect = 5e-05
 Identities = 30/116 (25%), Positives = 41/116 (35%), Gaps = 38/116 (32%)

Query: 141 KPYAC--TECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKY 198
           +PYAC    C      S  L +HI RIH     +    C  C +       +F       
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHI-RIHTG---QKPFQCRICMR-------NF------- 44

Query: 199 CPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
                              +S H+  H+R HTG +PF CD+C    A+    K H 
Sbjct: 45  ------------------SRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHT 82

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 8/65 (12%)

Query: 218 QSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM--H-----FLCHHCNRFGSRDIG 270
           QS  + +H+R HTG++PF C +C  + ++  +L  H+  H     F C  C R  +R   
Sbjct: 18  QSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFAR-SD 76

Query: 271 DLIEH 275
           +   H
Sbjct: 77  ERKRH 81

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 49.3 bits (118), Expect = 3e-08
 Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 3/55 (5%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHT---GEKPYECNLCDYKATQNSSIHFHMKLKH 347
            +C +C +  R K  +  H RKH        + C  C  +  +  S+  H    H
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 48.9 bits (117), Expect = 4e-08
 Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 5/57 (8%)

Query: 207 FQCYLCLYITRQSAHMRQHLRKHT---GRRPFPCDMCEYSAAQKWNLKMHMHFLCHH 260
            QC +C +  RQ A +  H RKH        FPC+ C     +  ++  H      H
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSK--SH 62

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 47.4 bits (113), Expect = 2e-07
 Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 3/53 (5%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHT---GEKPYECNLCDYKATQNSSIHFHMKV 64
           +C +C +  R K  +  H RKH        + C  C  +  +  S+  H   
Sbjct: 8  LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 45.5 bits (108), Expect = 8e-07
 Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 3/55 (5%)

Query: 115 FQCFRCRYSNKFRSNFLRHIRTHT---GHKPYACTECGYASILSTDLRKHIERIH 166
            QC  C ++ + +++   H R H        + C  CG        +  H  + H
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.4 bits (100), Expect = 1e-05
 Identities = 16/105 (15%), Positives = 21/105 (20%), Gaps = 34/105 (32%)

Query: 137 HTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHC 196
            +G     C  CG+       L  H  R H          C  C K        F     
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQ-RKHAETVAALRFPCEFCGK-------RF----- 48

Query: 197 KYCPSLRTVGFQCYLCLYITRQSAHMRQHLRK-HTGRRPFPCDMC 240
                                +   +  H  K H      P +  
Sbjct: 49  --------------------EKPDSVAAHRSKSHPALLLAPQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 13/99 (13%), Positives = 21/99 (21%), Gaps = 30/99 (30%)

Query: 229 HTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLN 288
            +G     C++C ++  QK +L  H      H     +                      
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRK---HAETVAALR-------------------- 38

Query: 289 DRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 327
                  + C  C         V  H  K          
Sbjct: 39  -------FPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ 70

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.8 bits (88), Expect = 3e-04
 Identities = 6/28 (21%), Positives = 15/28 (53%)

Query: 37 HTGEKPYECNLCDYKATQNSSIHFHMKV 64
           +G    +C +C +   Q +S+++H + 
Sbjct: 2  SSGSSGLQCEICGFTCRQKASLNWHQRK 29

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.4 bits (87), Expect = 5e-04
 Identities = 6/27 (22%), Positives = 15/27 (55%)

Query: 318 HTGEKPYECNLCDYKATQNSSIHFHMK 344
            +G    +C +C +   Q +S+++H +
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQR 28

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 49.0 bits (118), Expect = 5e-08
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 115 FQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
           FQC  C  +     +   HIRTHTG KP+AC  CG     S + ++H   I 
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR-DIQ 54

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 45.6 bits (109), Expect = 9e-07
 Identities = 18/127 (14%), Positives = 35/127 (27%), Gaps = 42/127 (33%)

Query: 15  YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSEN 74
           ++C +C         +  H+R HTGEKP+ C++C  K  ++     H             
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD----------- 52

Query: 75  VVLSGLHSCVHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHI 134
                               +  L     +                 Y  +   N +  +
Sbjct: 53  -------------------IQHILPILEDKVEE---------LLSKNYHLE---NEVARL 81

Query: 135 RTHTGHK 141
           +   G +
Sbjct: 82  KKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
           ++C +C         +  H+R HTGEKP+ C++C  K  ++     H  
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD 52

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 21/111 (18%), Positives = 33/111 (29%), Gaps = 43/111 (38%)

Query: 218 QSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM--H----FLCHHCNRFGSRDIGD 271
           +S H+  H+R HTG +PF CD+C    A+    K H         L        S+    
Sbjct: 15  RSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSK---- 70

Query: 272 LIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEK 322
                                            + H  +    ++K  GE+
Sbjct: 71  ---------------------------------NYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 7/54 (12%), Positives = 11/54 (20%), Gaps = 3/54 (5%)

Query: 115 FQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIE--RIH 166
           F C  C           RH        P    +       +  L   +   +  
Sbjct: 32  FACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVARLKKL 84

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 49.4 bits (119), Expect = 6e-08
 Identities = 24/125 (19%), Positives = 34/125 (27%), Gaps = 46/125 (36%)

Query: 25  RHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCV 84
            HK    +H+  H G +PY C +C  K      +  HMK     I T             
Sbjct: 20  THKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-----IHTGIKP--------- 65

Query: 85  HCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYA 144
             Y              C  C++          F        R +F  H    +  K Y 
Sbjct: 66  --Y-------------ECNICAK---------RFMW------RDSF--HRHVTSCTKSYE 93

Query: 145 CTECG 149
             +  
Sbjct: 94  AAKAE 98

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 49.0 bits (118), Expect = 8e-08
 Identities = 23/128 (17%), Positives = 35/128 (27%), Gaps = 45/128 (35%)

Query: 35  RKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSAT 94
              +G+K Y C  C    T  S    HM      +                         
Sbjct: 3   SGSSGDKLYPCQ-CGKSFTHKSQRDRHMS-----MHLGLR-------------------- 36

Query: 95  ETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASIL 154
                            P  + C  C    K + + + H++ HTG KPY C  C    + 
Sbjct: 37  -----------------P--YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMW 77

Query: 155 STDLRKHI 162
                +H+
Sbjct: 78  RDSFHRHV 85

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 48.6 bits (117), Expect = 1e-07
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 127 RSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
           +S   RH+  H G +PY C  CG    +   L  H  +IH
Sbjct: 22  KSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH-MKIH 60

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 45.9 bits (110), Expect = 9e-07
 Identities = 21/132 (15%), Positives = 40/132 (30%), Gaps = 42/132 (31%)

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLK 194
              +G K Y C +CG +    +   +H   +H+         C  C K        F   
Sbjct: 3   SGSSGDKLYPC-QCGKSFTHKSQRDRH-MSMHL---GLRPYGCGVCGK-------KF--- 47

Query: 195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
                                 +   H+  H++ HTG +P+ C++C      + +   H+
Sbjct: 48  ----------------------KMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHV 85

Query: 255 H-----FLCHHC 261
                 +     
Sbjct: 86  TSCTKSYEAAKA 97

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 42.0 bits (100), Expect = 3e-05
 Identities = 19/48 (39%), Positives = 26/48 (54%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHM 62
          Y C VC    + K  +  H++ HTG KPYECN+C  +     S H H+
Sbjct: 38 YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHV 85

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 42.0 bits (100), Expect = 3e-05
 Identities = 19/48 (39%), Positives = 26/48 (54%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHM 343
           Y C VC    + K  +  H++ HTG KPYECN+C  +     S H H+
Sbjct: 38  YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHV 85

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 41.7 bits (99), Expect = 3e-05
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 306 RHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
            HK    +H+  H G +PY C +C  K      +  HMK
Sbjct: 20  THKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 58

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 39.7 bits (94), Expect = 1e-04
 Identities = 22/129 (17%), Positives = 36/129 (27%), Gaps = 49/129 (37%)

Query: 217 RQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM--H-----FLCHHCNRFGSRDI 269
              +   +H+  H G RP+ C +C      K +L  HM  H     + C+ C        
Sbjct: 20  THKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICA------- 72

Query: 270 GDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC 329
                                      + F        +    +HV   +  K YE    
Sbjct: 73  ---------------------------KRF------MWRDSFHRHV--TSCTKSYEAAKA 97

Query: 330 DYKATQNSS 338
           +   T+ S 
Sbjct: 98  EQNTTEASG 106

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 48.3 bits (116), Expect = 7e-08
 Identities = 21/105 (20%), Positives = 34/105 (32%), Gaps = 32/105 (30%)

Query: 221 HMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCS 280
                 R H+G +P+ C +C     Q   +KMH+  L  H          + +       
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHI--LQKH---------TENVAK----- 45

Query: 281 VMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRK-HTGEKPY 324
                          + C  C  +   K D+  H+RK H+   P 
Sbjct: 46  ---------------FHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 24/118 (20%), Positives = 36/118 (30%), Gaps = 43/118 (36%)

Query: 28  GDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCY 87
           G      R H+GEKPYEC +C  + TQ+ ++  H+                         
Sbjct: 1   GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQ----------------KH----- 39

Query: 88  GDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRT-HTGHKPYA 144
                 TE     HC  C                     +S+   H+R  H+   P +
Sbjct: 40  ------TENVAKFHCPHCDT---------VIAR------KSDLGVHLRKQHSYSGPSS 76

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 16/39 (41%), Positives = 23/39 (58%)

Query: 309 GDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKH 347
           G      R H+GEKPYEC +C  + TQ+ ++  H+  KH
Sbjct: 1   GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKH 39

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 24/110 (21%), Positives = 34/110 (30%), Gaps = 39/110 (35%)

Query: 129 NFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVR--HCVHCNKEMHN 186
           +     RTH+G KPY C  C      S  ++ HI         E+V   HC HC+     
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHI-LQKH---TENVAKFHCPHCDT---- 53

Query: 187 LDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRK-HTGRRPF 235
                                          + + +  HLRK H+   P 
Sbjct: 54  ---VI-------------------------ARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 46.0 bits (110), Expect = 5e-07
 Identities = 10/54 (18%), Positives = 17/54 (31%), Gaps = 2/54 (3%)

Query: 115 FQCFRCRYSNKFRSNFLRHIRTHTG--HKPYACTECGYASILSTDLRKHIERIH 166
           ++C+ C            HI          + C  C       +DL  H+ + H
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.6 bits (109), Expect = 6e-07
 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGE--KPYECNLCDYKATQNSSIHFHMKLKH 347
           Y C++C       G +K H+ +   E    + C  CD    + S +  H++ +H
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 43.3 bits (103), Expect = 4e-06
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGE--KPYECNLCDYKATQNSSIHFHMK 63
          Y C++C       G +K H+ +   E    + C  CD    + S +  H++
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLR 66

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 48.2 bits (116), Expect = 8e-08
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 115 FQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
           F C  C  S K  S    H+  H+  +PY C  CG      +D++KH   IH
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKH-TFIH 52

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 46.6 bits (112), Expect = 2e-07
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 127 RSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
           +S+  +H   HTG KP+ C  CG A   S++L  H  R H
Sbjct: 42  KSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITH-SRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 19/50 (38%), Positives = 28/50 (56%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
          Y C  C      K D+KKH   HTGEKP++C +C    +Q+S++  H + 
Sbjct: 30 YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK 79

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 40.5 bits (96), Expect = 4e-05
 Identities = 19/49 (38%), Positives = 28/49 (57%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
           Y C  C      K D+KKH   HTGEKP++C +C    +Q+S++  H +
Sbjct: 30  YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSR 78

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.8 bits (115), Expect = 1e-07
 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 115 FQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
           ++C  C  S    S+  +H RTHTG KPY C ECG A I  + L  H  R+H
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH-HRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.8 bits (115), Expect = 1e-07
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%)

Query: 128 SNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
            +  R        + Y C ECG +   S+DL KH  R H
Sbjct: 4   GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTH 41

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 20/118 (16%), Positives = 33/118 (27%), Gaps = 44/118 (37%)

Query: 26  HKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVH 85
             G   +   +    + Y+C+ C    + +S +  H     +   T E            
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKH-----RRTHTGEKP---------- 46

Query: 86  CYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPY 143
            Y              C +C +          F        RS+ + H R HTG  P 
Sbjct: 47  -Y-------------KCDECGK---------AFIQ------RSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.1 bits (95), Expect = 5e-05
 Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKA-TQNSSIHFH 61
          Y+C  C     H  D+ KH R HTGEKPY+C+ C  KA  Q S +  H
Sbjct: 19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECG-KAFIQRSHLIGH 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.1 bits (95), Expect = 5e-05
 Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKA-TQNSSIHFH 342
           Y+C  C     H  D+ KH R HTGEKPY+C+ C  KA  Q S +  H
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECG-KAFIQRSHLIGH 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.3 bits (93), Expect = 1e-04
 Identities = 6/36 (16%), Positives = 14/36 (38%)

Query: 307 HKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
             G   +   +    + Y+C+ C    + +S +  H
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKH 37

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 115 FQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
           ++C RC+ S +++ N   H   HTG KPY C  CG       +L+ H  RIH
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH-TRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 45.1 bits (108), Expect = 8e-07
 Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 1/39 (2%)

Query: 128 SNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
            +   H       KPY C  C  +     +L  H + +H
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASH-KTVH 40

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 43.2 bits (103), Expect = 3e-06
 Identities = 18/50 (36%), Positives = 30/50 (60%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
          Y+C  C    R+KG++  H   HTGEKPY CN+C  +  + +++  H ++
Sbjct: 18 YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRI 67

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 43.2 bits (103), Expect = 4e-06
 Identities = 18/49 (36%), Positives = 29/49 (59%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
           Y+C  C    R+KG++  H   HTGEKPY CN+C  +  + +++  H +
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR 66

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 21/112 (18%), Positives = 30/112 (26%), Gaps = 44/112 (39%)

Query: 32  KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLS 91
            H      +KPY+C+ C        ++  H     + + T E             Y    
Sbjct: 7   HHSHMTHSDKPYKCDRCQASFRYKGNLASH-----KTVHTGEKP-----------Y---- 46

Query: 92  SATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPY 143
                     C  C            F         +N   H R H+G KPY
Sbjct: 47  ---------RCNICGA---------QFNR------PANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 7/32 (21%), Positives = 12/32 (37%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
            H      +KPY+C+ C        ++  H  
Sbjct: 7   HHSHMTHSDKPYKCDRCQASFRYKGNLASHKT 38

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 46.2 bits (109), Expect = 2e-07
 Identities = 16/50 (32%), Positives = 24/50 (48%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
          Y C  C    +    +KKH+R HT  +PY C  C++      ++  HMK 
Sbjct: 2  YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS 51

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 46.2 bits (109), Expect = 2e-07
 Identities = 16/49 (32%), Positives = 24/49 (48%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
           Y C  C    +    +KKH+R HT  +PY C  C++      ++  HMK
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK 50

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 43.6 bits (102), Expect = 2e-06
 Identities = 18/48 (37%), Positives = 25/48 (52%)

Query: 115 FQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHI 162
           + C  C    K  S   +HIRTHT  +PY CT C ++     +L KH+
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHM 49

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 42.0 bits (98), Expect = 8e-06
 Identities = 16/48 (33%), Positives = 26/48 (54%)

Query: 207 FQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           + C  C    ++ + +++H+R HT  RP+ C  C +S   K NL  HM
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHM 49

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 115 FQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
           + C  C  +    S  ++H R HTG KPY C ECG A   ++ L  H +RIH
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH-QRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 45.9 bits (110), Expect = 4e-07
 Identities = 25/104 (24%), Positives = 35/104 (33%), Gaps = 36/104 (34%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESF 191
                H+G KPY C ECG A   S+ L +H +R+H     E    C+ C K       +F
Sbjct: 4   GSSGIHSGEKPYGCVECGKAFSRSSILVQH-QRVHTG---EKPYKCLECGK-------AF 52

Query: 192 LLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPF 235
                                     Q++ +  H R HT     
Sbjct: 53  -------------------------SQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 22/113 (19%), Positives = 32/113 (28%), Gaps = 44/113 (38%)

Query: 32  KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLS 91
                H+GEKPY C  C    +++S +  H     Q + T E             Y    
Sbjct: 4   GSSGIHSGEKPYGCVECGKAFSRSSILVQH-----QRVHTGEK-----------PY---- 43

Query: 92  SATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYA 144
                     C++C +          F         S  + H R HT      
Sbjct: 44  ---------KCLECGK---------AFSQ------NSGLINHQRIHTSGPSSG 72

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 18/47 (38%), Positives = 23/47 (48%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
          Y C  C         + +H R HTGEKPY+C  C    +QNS +  H
Sbjct: 15 YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 18/47 (38%), Positives = 23/47 (48%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
           Y C  C         + +H R HTGEKPY+C  C    +QNS +  H
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                H+GEKPY C  C    +++S +  H
Sbjct: 4   GSSGIHSGEKPYGCVECGKAFSRSSILVQH 33

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C ECG +   ++ L KH +R+H
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKH-QRVH 35

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 10/29 (34%), Positives = 11/29 (37%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               TGEKPY C  C       S +  H
Sbjct: 3  SGSSGTGEKPYNCKECGKSFRWASCLLKH 31

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 10/29 (34%), Positives = 11/29 (37%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGEKPY C  C       S +  H
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKH 31

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 46
          Y C  C    R    + KH R H+GEKP   +
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 327
           Y C  C    R    + KH R H+GEKP   +
Sbjct: 13  YNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + +G KPY C ECG A I  + L  H ER H
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVH-ERTH 35

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               +GEKPYECN C       S +  H
Sbjct: 3  SGSSGSGEKPYECNECGKAFIWKSLLIVH 31

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                +GEKPYECN C       S +  H
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVH 31

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.3 bits (108), Expect = 4e-07
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KP+ C ECG     S  L KH  R H
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKH-LRSH 35

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
               TGEKP++C  C    + + S+  H++ 
Sbjct: 3  SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRS 34

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
                TGEKP++C  C    + + S+  H++
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLR 33

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 4e-07
 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C ECG A I  + L++H +RIH
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEH-QRIH 35

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 5/42 (11%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSE 73
                TGEKPY C  C      +S +  H     Q I T E
Sbjct: 2  SSGSSGTGEKPYNCEECGKAFIHDSQLQEH-----QRIHTGE 38

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 10/30 (33%), Positives = 12/30 (40%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKPY C  C      +S +  H
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEH 31

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 45.6 bits (109), Expect = 5e-07
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 296 YRCFVCPYLSRHKGDVKKHVR--KHTGEKPYECNLCDYKATQNSSIHFHMKLKHNM 349
           YRC VC  +  H  +  +H         K Y C  C  + T+  ++  H+K+ H +
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 42.9 bits (102), Expect = 4e-06
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 15 YRCFVCPYLSRHKGDVKKHVR--KHTGEKPYECNLCDYKATQNSSIHFHMKV 64
          YRC VC  +  H  +  +H         K Y C  C  + T+  ++  H+K+
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 3/54 (5%)

Query: 115 FQCFRCRYSNKFRSNFLRHIRT--HTGHKPYACTECGYASILSTDLRKHIERIH 166
           ++C  C       SNF RH  T      K Y C  C        ++  H+ +I 
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV-KII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 36.8 bits (86), Expect = 7e-04
 Identities = 9/50 (18%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 207 FQCYLCLYITRQSAHMRQHLR--KHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           ++C +C  +    ++  +H         + +PC  C     +K N+  H+
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KP+ C ECG +  +S+ L  H +RIH
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATH-QRIH 35

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 5/42 (11%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSE 73
                TGEKP+EC  C    + +S +  H     Q I T E
Sbjct: 2  SSGSSGTGEKPFECAECGKSFSISSQLATH-----QRIHTGE 38

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKP+EC  C    + +S +  H
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATH 31

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG +PY CT CG A    ++L KH ++IH
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKH-QKIH 35

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
               TGE+PY C +C    T  S++  H K+
Sbjct: 3  SGSSGTGERPYICTVCGKAFTDRSNLIKHQKI 34

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGE+PY C +C    T  S++  H
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKH 31

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 46
          Y C VC      + ++ KH + HTGEKP   +
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 327
           Y C VC      + ++ KH + HTGEKP   +
Sbjct: 13  YICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.4 bits (106), Expect = 6e-07
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C ECG A    + L  H  R H
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIH-TRTH 35

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 10/30 (33%), Positives = 11/30 (36%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TG KPY CN C       S +  H
Sbjct: 2  SSGSSGTGMKPYVCNECGKAFRSKSYLIIH 31

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 10/30 (33%), Positives = 11/30 (36%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TG KPY CN C       S +  H
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIH 31

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 7e-07
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + +G KPY C  CG A  LS +L +H +RIH
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRH-QRIH 35

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 5/42 (11%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSE 73
                +GEKPY C+ C      ++ +  H     Q I T E
Sbjct: 2  SSGSSGSGEKPYVCDYCGKAFGLSAELVRH-----QRIHTGE 38

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 8/30 (26%), Positives = 13/30 (43%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 +GEKPY C+ C      ++ +  H
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRH 31

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 44.1 bits (105), Expect = 9e-07
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KPY C ECG A I +T L +H    H
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKH 347
                TG+KPYEC  C     QN+S+  H +  H
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               TG+KPYEC  C     QN+S+  H
Sbjct: 3  SGSSGTGKKPYECIECGKAFIQNTSLIRH 31

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KPY C ECG   I   DL  H   +H
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTH-HMVH 35

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               TGEKPY+C  C         ++ H
Sbjct: 3  SGSSGTGEKPYKCEECGKGFICRRDLYTH 31

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGEKPY+C  C         ++ H
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTH 31

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C++CG A    + L  H ++ H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIH-QQSH 35

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 7e-06
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TGEKPY+C+ C    T+ S +H H
Sbjct: 2  SSGSSGTGEKPYKCSDCGKAFTRKSGLHIH 31

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 7e-06
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKPY+C+ C    T+ S +H H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIH 31

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C++C     L + L  H +R H
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVH-QRSH 35

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 38.7 bits (91), Expect = 8e-05
 Identities = 9/30 (30%), Positives = 12/30 (40%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TG KPY C+ C    +  S +  H
Sbjct: 2  SSGSSGTGVKPYGCSQCAKTFSLKSQLIVH 31

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 38.7 bits (91), Expect = 8e-05
 Identities = 9/30 (30%), Positives = 12/30 (40%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TG KPY C+ C    +  S +  H
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVH 31

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               +  G KPY C+ECG A    + L  H  R H
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIH-MRTH 35

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                GEKPY C+ C    +  S +  H
Sbjct: 3  SGSSGAGEKPYGCSECGKAFSSKSYLIIH 31

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 GEKPY C+ C    +  S +  H
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIH 31

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C ECG A     +L +H +RIH
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQH-QRIH 35

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 5/41 (12%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSE 73
               TGEKPY C  C     Q +++  H     Q I T E
Sbjct: 3  SGSSGTGEKPYRCGECGKAFAQKANLTQH-----QRIHTGE 38

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGEKPY C  C     Q +++  H
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQH 31

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KP+ C+EC  A    ++L  H +R H
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVH-QRTH 35

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               TGEKP+EC+ C       S++  H
Sbjct: 3  SGSSGTGEKPFECSECQKAFNTKSNLIVH 31

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGEKP+EC+ C       S++  H
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVH 31

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + +G KPY C+ECG A    T L +H  RIH
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEH-RRIH 35

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 8/30 (26%), Positives = 16/30 (53%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                +GEKPY+C+ C     +++ ++ H
Sbjct: 2  SSGSSGSGEKPYKCSECGKAFHRHTHLNEH 31

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 8/30 (26%), Positives = 16/30 (53%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 +GEKPY+C+ C     +++ ++ H
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEH 31

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C  CG A  +S+ L +H   +H
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQH-HSVH 35

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TGEKPY+C +C      +S +  H
Sbjct: 2  SSGSSGTGEKPYKCQVCGKAFRVSSHLVQH 31

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKPY+C +C      +S +  H
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQH 31

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C ECG A  + + L  H + IH
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTH-QVIH 35

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 5/42 (11%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSE 73
                TG KPY CN C    +  SS+  H     Q I T E
Sbjct: 2  SSGSSGTGVKPYMCNECGKAFSVYSSLTTH-----QVIHTGE 38

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TG KPY CN C    +  SS+  H
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTH 31

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 128 SNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHM 167
               RH R HTGH+P+ C +C  A   S  L  H+ + H 
Sbjct: 51  DELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHM-KRHF 89

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 39.8 bits (94), Expect = 8e-05
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 31 KKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
           +H RKHTG +P++C  CD   +++  +  HMK 
Sbjct: 54 TRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 39.8 bits (94), Expect = 9e-05
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 312 KKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
            +H RKHTG +P++C  CD   +++  +  HMK
Sbjct: 54  TRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMK 86

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 15/37 (40%), Positives = 24/37 (64%)

Query: 218 QSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           +S  + +H RKHTG RPF C  C+ + ++  +L +HM
Sbjct: 49  RSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHM 85

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 37.1 bits (87), Expect = 8e-04
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 9/59 (15%)

Query: 218 QSAHMRQHLRKHTGRRPFPCDM--CEYSAAQKWNLKMHM--H-----FLCHHCNRFGSR 267
           +S+H++ HLR HTG +P+ CD   C +  A+   L  H   H     F C  C+R  SR
Sbjct: 19  KSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSR 77

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KP+ C ECG +   ++ L  H +RIH
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVH-QRIH 35

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TGEKP+EC  C    + NS +  H
Sbjct: 2  SSGSSGTGEKPHECRECGKSFSFNSQLIVH 31

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKP+EC  C    + NS +  H
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVH 31

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + +G KP+ C ECG     ++ L  H +R+H
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSH-QRVH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               +GEKP++C  C  + TQNS +H H
Sbjct: 3  SGSSGSGEKPFKCEECGKRFTQNSQLHSH 31

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                +GEKP++C  C  + TQNS +H H
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSH 31

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG + Y C+ECG A    + L  H +RIH
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMH-QRIH 35

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 9/30 (30%), Positives = 14/30 (46%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TGE+ YEC+ C     + S++  H
Sbjct: 2  SSGSSGTGERHYECSECGKAFARKSTLIMH 31

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 9/30 (30%), Positives = 14/30 (46%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGE+ YEC+ C     + S++  H
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMH 31

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG +PY C ECG A    + L  H  R H
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICH-RRSH 35

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 10/30 (33%), Positives = 13/30 (43%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TG++PYEC  C       SS+  H
Sbjct: 2  SSGSSGTGQRPYECIECGKAFKTKSSLICH 31

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 10/30 (33%), Positives = 13/30 (43%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TG++PYEC  C       SS+  H
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICH 31

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C ECG A   ++ L +H +RIH
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARH-QRIH 35

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TGEKPY+CN C    +Q S +  H
Sbjct: 2  SSGSSGTGEKPYKCNECGKAFSQTSKLARH 31

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKPY+CN C    +Q S +  H
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARH 31

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG K Y C ECG +   +  L KH ER+H
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKH-ERLH 35

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 8/29 (27%), Positives = 11/29 (37%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               TGEK Y C  C    ++   +  H
Sbjct: 3  SGSSGTGEKLYNCKECGKSFSRAPCLLKH 31

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 8/29 (27%), Positives = 11/29 (37%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGEK Y C  C    ++   +  H
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKH 31

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C  C  A      L +H ++ H
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQH-QKTH 35

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TGEKPYEC +C    TQ + +  H
Sbjct: 2  SSGSSGTGEKPYECKVCSKAFTQKAHLAQH 31

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKPYEC +C    TQ + +  H
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQH 31

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY+C  CG A +LS  L +H  R+H
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQH-LRVH 35

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 7e-05
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
                TGEKPY CN+C      ++ ++ H++V
Sbjct: 2  SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRV 34

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
                 TGEKPY CN+C      ++ ++ H++
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLR 33

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KPY C ECG A  + ++L KH ++IH
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKH-QKIH 35

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
               TGEKPY C  C    T  S++  H K+
Sbjct: 3  SGSSGTGEKPYICAECGKAFTIRSNLIKHQKI 34

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGEKPY C  C    T  S++  H
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKH 31

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C ECG     ++ L +H +RIH
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRH-QRIH 35

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 5/41 (12%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSE 73
               TGEKPY+CN C      NS +  H     Q I T E
Sbjct: 3  SGSSGTGEKPYKCNECGKVFRHNSYLSRH-----QRIHTGE 38

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGEKPY+CN C      NS +  H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRH 31

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 46
          Y+C  C  + RH   + +H R HTGEKP   +
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 327
           Y+C  C  + RH   + +H R HTGEKP   +
Sbjct: 13  YKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + +G KPY C ECG       DL  H +R+H
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFH-QRVH 35

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 9/30 (30%), Positives = 13/30 (43%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                +GEKPY+C  C     +   + FH
Sbjct: 2  SSGSSGSGEKPYKCVECGKGYKRRLDLDFH 31

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 9/30 (30%), Positives = 13/30 (43%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 +GEKPY+C  C     +   + FH
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFH 31

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KPY C ECG + I  + L +H  RIH
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRH-RRIH 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TGEKPY CN C     Q S ++ H
Sbjct: 2  SSGSSGTGEKPYICNECGKSFIQKSHLNRH 31

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKPY CN C     Q S ++ H
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRH 31

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG +P+ C ECG + I S  L +H +RIH
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQH-QRIH 35

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               TGE+P++CN C     Q++ +  H
Sbjct: 3  SGSSGTGERPHKCNECGKSFIQSAHLIQH 31

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGE+P++CN C     Q++ +  H
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQH 31

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C ECG A    + L  H +  H
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIH-QATH 35

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 5/42 (11%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSE 73
                TGEKPY+CN C       SS+  H     QA  + E
Sbjct: 2  SSGSSGTGEKPYKCNECGKAFRARSSLAIH-----QATHSGE 38

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKPY+CN C       SS+  H
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIH 31

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 46
          Y+C  C    R +  +  H   H+GEKP   +
Sbjct: 13 YKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 327
           Y+C  C    R +  +  H   H+GEKP   +
Sbjct: 13  YKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C ECG A    ++L  H ++IH
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTH-QKIH 35

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 5/41 (12%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSE 73
               TGEKPY C  C    T  S++  H     Q I T E
Sbjct: 3  SGSSGTGEKPYRCAECGKAFTDRSNLFTH-----QKIHTGE 38

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGEKPY C  C    T  S++  H
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTH 31

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KPY C++CG +    + LR H ++ H
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIH-QKCH 35

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               TGEKPY+C+ C    T  S +  H
Sbjct: 3  SGSSGTGEKPYKCSDCGKSFTWKSRLRIH 31

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGEKPY+C+ C    T  S +  H
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIH 31

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 46
          Y+C  C      K  ++ H + HTGE+    +
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 327
           Y+C  C      K  ++ H + HTGE+    +
Sbjct: 13  YKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C ECG     ++ L  H +RIH
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANH-QRIH 35

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TGEKPY+CN C    TQNS +  H
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLANH 31

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKPY+CN C    TQNS +  H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANH 31

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.6 bits (101), Expect = 3e-06
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KPY C ECG A   ++   +H +R+H
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQH-QRLH 35

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
               TGEKPY+C  C      NSS   H ++
Sbjct: 3  SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRL 34

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 12/29 (41%), Positives = 13/29 (44%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGEKPY+C  C      NSS   H
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQH 31

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C +CG A  + + L  H + IH
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTH-QAIH 35

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 5/42 (11%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSE 73
                TGEKPYECN C    +  SS+  H     QAI T +
Sbjct: 2  SSGSSGTGEKPYECNQCGKAFSVRSSLTTH-----QAIHTGK 38

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 13/30 (43%), Positives = 15/30 (50%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKPYECN C    +  SS+  H
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTH 31

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 44.8 bits (105), Expect = 3e-06
 Identities = 17/110 (15%), Positives = 33/110 (30%), Gaps = 2/110 (1%)

Query: 218 QSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHST 277
             +  + +    TG   F C  C  +      L +HM+   H+ +     D  +    S 
Sbjct: 3   SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62

Query: 278 QCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRK--HTGEKPYE 325
                 +          + +C  C +      D+  H+ K  H  +    
Sbjct: 63  PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 41.7 bits (97), Expect = 4e-05
 Identities = 18/137 (13%), Positives = 29/137 (21%), Gaps = 39/137 (28%)

Query: 30  VKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGD 89
            K +    TG   + C  C         +  HM                           
Sbjct: 7   GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNET------------------------ 42

Query: 90  LSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECG 149
                     D   +                R+S   + + L         K   C  CG
Sbjct: 43  ------GHYRDDNHETD---------NNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCG 87

Query: 150 YASILSTDLRKHIERIH 166
           ++     DL  H+ +  
Sbjct: 88  HSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 40.1 bits (93), Expect = 1e-04
 Identities = 15/128 (11%), Positives = 31/128 (24%), Gaps = 31/128 (24%)

Query: 127 RSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHN 186
            S+   +    TG   + C +C  A     +L  H                         
Sbjct: 4   GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVH------------------------- 38

Query: 187 LDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQ 246
                 +    +               +   +   + +   K   ++   C  C +S   
Sbjct: 39  ------MNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFES 92

Query: 247 KWNLKMHM 254
             +L +HM
Sbjct: 93  LQDLSVHM 100

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KP+ C  CG +    + L +H   +H
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRH-SMVH 35

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
               TGEKP++C++C       S ++ H  V
Sbjct: 3  SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMV 34

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGEKP++C++C       S ++ H
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRH 31

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              +  G KPY C  CG   +    LR H   IH
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAH-VLIH 34

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
                GEKPY+C  C  +  Q + +  H+ +
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHVLI 33

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 9/30 (30%), Positives = 14/30 (46%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFHM 343
                 GEKPY+C  C  +  Q + +  H+
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHV 31

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG  P+ C+ECG      T+L  H ++IH
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIH-QKIH 35

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               TGE P+ C+ C    T  +++  H
Sbjct: 3  SGSSGTGENPFICSECGKVFTHKTNLIIH 31

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGE P+ C+ C    T  +++  H
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIH 31

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C+ CG A      L  H +RIH
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVH-QRIH 35

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TGEKPYEC++C    +   S+  H
Sbjct: 2  SSGSSGTGEKPYECSVCGKAFSHRQSLSVH 31

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKPYEC++C    +   S+  H
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVH 31

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 46
          Y C VC     H+  +  H R H+G+KP   +
Sbjct: 13 YECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 327
           Y C VC     H+  +  H R H+G+KP   +
Sbjct: 13  YECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C+ CG +    + L  H ++IH
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVH-QQIH 35

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TGEKPYEC++C    T+ S +H H
Sbjct: 2  SSGSSGTGEKPYECSICGKSFTKKSQLHVH 31

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKPYEC++C    T+ S +H H
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVH 31

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 46
          Y C +C      K  +  H + HTGEKP   +
Sbjct: 13 YECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 327
           Y C +C      K  +  H + HTGEKP   +
Sbjct: 13  YECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KPY C  C  A      L +H +R+H
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQH-QRVH 35

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               TGEKPYEC++C    + ++S+  H
Sbjct: 3  SGSSGTGEKPYECDVCRKAFSHHASLTQH 31

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGEKPYEC++C    + ++S+  H
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQH 31

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 46
          Y C VC     H   + +H R H+GEKP   +
Sbjct: 13 YECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 327
           Y C VC     H   + +H R H+GEKP   +
Sbjct: 13  YECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + +G KP+ C ECG A   +  L  H  RIH
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASH-LRIH 35

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 9e-05
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
                +GEKP++C  C     QN  +  H+++
Sbjct: 2  SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRI 34

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 9/30 (30%), Positives = 13/30 (43%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 +GEKP++C  C     QN  +  H
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASH 31

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + +  K + C ECG    L + L +H +RIH
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQH-QRIH 35

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 6/33 (18%), Positives = 14/33 (42%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
                +  K ++C+ C    T  S ++ H ++
Sbjct: 2  SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRI 34

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 6/32 (18%), Positives = 13/32 (40%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
                 +  K ++C+ C    T  S ++ H +
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQR 33

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KPY C++CG + I  + L  H +RIH
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVH-QRIH 35

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TGEKPYEC+ C     + S +H H
Sbjct: 2  SSGSSGTGEKPYECSDCGKSFIKKSQLHVH 31

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKPYEC+ C     + S +H H
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVH 31

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KP+ C +CG A      L +H  RIH
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQH-RRIH 35

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 9e-05
 Identities = 8/30 (26%), Positives = 14/30 (46%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TGEKP++C  C    + +  ++ H
Sbjct: 2  SSGSSGTGEKPFDCIDCGKAFSDHIGLNQH 31

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 9e-05
 Identities = 8/30 (26%), Positives = 14/30 (46%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKP++C  C    + +  ++ H
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQH 31

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG + Y C+ECG A I  + L  H +RIH
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMH-QRIH 35

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TGE+ YEC+ C     Q S++  H
Sbjct: 2  SSGSSGTGERHYECSECGKAFIQKSTLSMH 31

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGE+ YEC+ C     Q S++  H
Sbjct: 2   SSGSSGTGERHYECSECGKAFIQKSTLSMH 31

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.2 bits (100), Expect = 4e-06
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + +G KP+ C ECG     ++    H +R H
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSH-QRSH 35

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               +GEKP++C  C      NS  + H
Sbjct: 3  SGSSGSGEKPFKCEECGKGFYTNSQCYSH 31

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                +GEKP++C  C      NS  + H
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSH 31

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.2 bits (100), Expect = 4e-06
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KP  CTECG A    + L  H +R H
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMH-QRTH 35

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 9/29 (31%), Positives = 11/29 (37%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               TGEKP +C  C       S +  H
Sbjct: 3  SGSSGTGEKPCKCTECGKAFCWKSQLIMH 31

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 9/29 (31%), Positives = 11/29 (37%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGEKP +C  C       S +  H
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMH 31

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KP+ C ECG      + L  H  ++H
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVH-HKLH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
                TGEKP++C  C    ++ S+++ H K+
Sbjct: 2  SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKL 34

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKP++C  C    ++ S+++ H
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVH 31

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG K Y C ECG     ++ L +H ++IH
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQH-QKIH 35

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
                TGEK Y+CN C    ++NS +  H K+
Sbjct: 2  SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKI 34

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEK Y+CN C    ++NS +  H
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQH 31

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C ECG     ++ L +H   IH
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRH-RGIH 35

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.8 bits (89), Expect = 1e-04
 Identities = 14/29 (48%), Positives = 16/29 (55%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               TGEKPY+CN C    TQNS +  H
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLVRH 31

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.8 bits (89), Expect = 1e-04
 Identities = 14/29 (48%), Positives = 16/29 (55%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGEKPY+CN C    TQNS +  H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRH 31

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C ECG     ++ L +H + IH
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARH-QLIH 35

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
                TGEKPY+C+ C     +NS +  H  +
Sbjct: 2  SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLI 34

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
                 TGEKPY+C+ C     +NS +  H  
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQL 33

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KPY C ECG A   +T L +H +R+H
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQH-QRVH 35

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TGEKPYEC  C    +Q + +  H
Sbjct: 2  SSGSSGTGEKPYECKECGKAFSQTTHLIQH 31

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKPYEC  C    +Q + +  H
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQH 31

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + +  KPY C +CG       +L  H +R+H
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMH-QRVH 35

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 8/32 (25%), Positives = 14/32 (43%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
               + EKPY+C  C     +  ++  H +V
Sbjct: 3  SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRV 34

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 7/29 (24%), Positives = 12/29 (41%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                + EKPY+C  C     +  ++  H
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMH 31

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + +G KPY C ECG     ++ L  H  RIH
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNH-WRIH 35

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               +GEKPY+CN C    TQNS +  H
Sbjct: 3  SGSSGSGEKPYKCNECGKVFTQNSHLTNH 31

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                +GEKPY+CN C    TQNS +  H
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNH 31

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG  PY C ECG A      L  H +R H
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISH-QRTH 35

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               TGE PYEC+ C    ++   +  H
Sbjct: 3  SGSSGTGENPYECHECGKAFSRKYQLISH 31

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGE PYEC+ C    ++   +  H
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISH 31

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KP+ CT CG +     +L  H +RIH
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTH-QRIH 35

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 5/41 (12%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSE 73
               TG+KP+EC  C        ++  H     Q I T E
Sbjct: 3  SGSSGTGQKPFECTHCGKSFRAKGNLVTH-----QRIHTGE 38

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TG+KP+EC  C        ++  H
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTH 31

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 46
          + C  C    R KG++  H R HTGEK    +
Sbjct: 13 FECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 327
           + C  C    R KG++  H R HTGEK    +
Sbjct: 13  FECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KPY C  C  +    + L  H +RIH
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVH-QRIH 35

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 5/41 (12%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSE 73
               TGEKPY+C++C       SS+  H     Q I T E
Sbjct: 3  SGSSGTGEKPYKCDVCHKSFRYGSSLTVH-----QRIHTGE 38

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGEKPY+C++C       SS+  H
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVH 31

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 46
          Y+C VC    R+   +  H R HTGEKP   +
Sbjct: 13 YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 327
           Y+C VC    R+   +  H R HTGEKP   +
Sbjct: 13  YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.8 bits (99), Expect = 5e-06
 Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              +  G KPY C +CG A      L  H  R+H
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVH-IRVH 34

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
                GEKPY C+ C    +Q  S+  H++V
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRV 33

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
                 GEKPY C+ C    +Q  S+  H++
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR 32

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 43.0 bits (102), Expect = 5e-06
 Identities = 10/39 (25%), Positives = 14/39 (35%)

Query: 128 SNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
           S   RH + H G+       C +     T   KH+   H
Sbjct: 47  SRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 3/42 (7%)

Query: 127 RSNFLRHIRTHTGHKPYACTE--CGYASILSTDLRKHIERIH 166
            +    H  +HT   PY C    C     L + L++H E++H
Sbjct: 16  HNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRH-EKVH 56

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG K + CTECG A    + L  H ++IH
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMH-QKIH 35

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 9e-05
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 5/41 (12%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSE 73
               TG K +EC  C    T+ S++  H     Q I T E
Sbjct: 3  SGSSGTGGKHFECTECGKAFTRKSTLSMH-----QKIHTGE 38

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TG K +EC  C    T+ S++  H
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMH 31

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG  PY C ECG        L  H ++ H
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSH-QKTH 35

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + TG KP+ C ECG +      L +H +R+H
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQH-QRVH 35

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
                TGEKP++C  C     Q   +  H +V
Sbjct: 2  SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRV 34

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 9/30 (30%), Positives = 12/30 (40%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKP++C  C     Q   +  H
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQH 31

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.8 bits (99), Expect = 6e-06
 Identities = 8/35 (22%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               +  G + + C++CG   + +++  +H  RIH
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQH-RRIH 35

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 7/33 (21%), Positives = 13/33 (39%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
                 GE+ + C+ C     Q S+   H ++
Sbjct: 2  SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRI 34

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 7/30 (23%), Positives = 11/30 (36%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                  GE+ + C+ C     Q S+   H
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQH 31

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KPY C ECG A    ++L  H + IH
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTH-QVIH 35

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 5/41 (12%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSE 73
               TGEKPY+CN C      +S++  H     Q I T E
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRAHSNLTTH-----QVIHTGE 38

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGEKPY+CN C      +S++  H
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTH 31

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KPY C EC  A    ++L  H +R H
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVH-QRTH 35

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               TGEKPYECN C       S++  H
Sbjct: 3  SGSSGTGEKPYECNECQKAFNTKSNLMVH 31

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TGEKPYECN C       S++  H
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVH 31

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 7e-06
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + +G KPY C ECG      + L  H +R H
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAH-QRTH 35

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               +GEKPY CN C    +Q S +  H
Sbjct: 3  SGSSGSGEKPYGCNECGKTFSQKSILSAH 31

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                +GEKPY CN C    +Q S +  H
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAH 31

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 12/32 (37%), Positives = 14/32 (43%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 46
          Y C  C      K  +  H R HTGEKP   +
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 12/32 (37%), Positives = 14/32 (43%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 327
           Y C  C      K  +  H R HTGEKP   +
Sbjct: 13  YGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 41.8 bits (99), Expect = 7e-06
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + +  KPY C  CG        L  HI+++H
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 36

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 7e-06
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + +G KP+ C ECG     ++ L  H +R+H
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSH-QRVH 35

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                +GEKP++C  C  + TQNS +H H
Sbjct: 2  SSGSSGSGEKPFQCEECGKRFTQNSHLHSH 31

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 +GEKP++C  C  + TQNS +H H
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSH 31

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 8e-06
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KPY C ECG A   ++ L +H +R+H
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARH-QRVH 35

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TG KPY+CN C    +Q S +  H
Sbjct: 2  SSGSSGTGGKPYQCNECGKAFSQTSKLARH 31

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TG KPY+CN C    +Q S +  H
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARH 31

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 41.3 bits (98), Expect = 9e-06
 Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              +  G KPY C  CG        L+ H+ RIH
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHL-RIH 34

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 8/32 (25%), Positives = 15/32 (46%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
                GEKPY C +C  +     ++  H+++
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRI 33

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 8/30 (26%), Positives = 13/30 (43%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFHM 343
                 GEKPY C +C  +     ++  H+
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHL 31

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPY 43
          Y C +C    RH   +K H+R HTG  P 
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPY 324
           Y C +C    RH   +K H+R HTG  P 
Sbjct: 12  YPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 9e-06
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + +G KPY C EC    I    L +H +R+H
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQH-KRVH 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 9e-04
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
                +G+KPYEC  C     Q   ++ H +V
Sbjct: 2  SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRV 34

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              +  G K + C EC      ++ LR H + +H
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLH-QNVH 35

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
                GEK ++C  CD   +Q SS+  H  V
Sbjct: 3  SGSSGMGEKTWKCRECDMCFSQASSLRLHQNV 34

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
                 GEK ++C  CD   +Q SS+  H  
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQN 33

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 1e-05
 Identities = 54/416 (12%), Positives = 105/416 (25%), Gaps = 119/416 (28%)

Query: 2   GIAYLN----DRRNVIM------YRCFVCPYLSRHKG---------DVKKHVRKHTGEKP 42
            I +LN    +    ++             + SR             ++  +R+    KP
Sbjct: 183 KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP 242

Query: 43  YECNLCDYKATQNSSIHFHMKVGVQAIFTSENV----VLSGLHSCVHCYGDLSSA-TETE 97
           YE  L      QN+       +  + + T+        LS   +        S   T  E
Sbjct: 243 YENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE 302

Query: 98  LLDHCMQC--SRDTCIP--------------------------GWFQ------------C 117
           +    ++    R   +P                           W               
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362

Query: 118 FRCRYSNKFRSNFLR--------HIRTHT-----GHKPYACTE-----CGYASILSTDLR 159
                  ++R  F R        HI T            +            S++    +
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK 422

Query: 160 KHIERIHMPQFVEDVRHCVHCNKEMHN-LDESFLLKHCKYCPSLRTVGFQCYLCLYITRQ 218
           +    I       +++  +     +H  + + + +        L       Y   +I   
Sbjct: 423 ESTISIPSIYL--ELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI--- 477

Query: 219 SAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCN-RFGSRDIGDLIEHST 277
             H   HL+          +       ++  L   M FL    + RF    +   I H +
Sbjct: 478 -GH---HLKN--------IEH-----PERMTL-FRMVFL----DFRF----LEQKIRHDS 511

Query: 278 QCSVMGIAYLNDRRNVIMYRCFVC---PYLSRHKGDVKKHVRKHTGEKPYECNLCD 330
                  + LN  + +  Y+ ++C   P   R    +   + K   E        D
Sbjct: 512 TAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKI-EENLICSKYTD 566

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KPY C +CG       +L  H +++H
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMH-QKVH 35

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 9/30 (30%), Positives = 12/30 (40%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TGEKPY+C  C        ++  H
Sbjct: 2  SSGSSGTGEKPYKCEKCGKGYNSKFNLDMH 31

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 9/30 (30%), Positives = 12/30 (40%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKPY+C  C        ++  H
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMH 31

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
           RH R HTG KP+ C  C  +   S  L  H+ + H
Sbjct: 65  RHYRKHTGAKPFQCGVCNRSFSRSDHLALHM-KRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 40.7 bits (96), Expect = 5e-05
 Identities = 13/37 (35%), Positives = 24/37 (64%)

Query: 28 GDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
           ++ +H RKHTG KP++C +C+   +++  +  HMK 
Sbjct: 61 DELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 40.7 bits (96), Expect = 6e-05
 Identities = 13/36 (36%), Positives = 24/36 (66%)

Query: 309 GDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
            ++ +H RKHTG KP++C +C+   +++  +  HMK
Sbjct: 61  DELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMK 96

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 15/37 (40%), Positives = 24/37 (64%)

Query: 218 QSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           +S  + +H RKHTG +PF C +C  S ++  +L +HM
Sbjct: 59  RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHM 95

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              +  G K + C EC      S+ L  H +RIH
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVH-QRIH 35

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                G+K ++CN C    TQ+SS+  H
Sbjct: 3  SGSSGAGKKLFKCNECKKTFTQSSSLTVH 31

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 G+K ++CN C    TQ+SS+  H
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVH 31

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + T  K Y C ECG A      L +H ++IH
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRH-QKIH 35

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 13/48 (27%), Positives = 17/48 (35%), Gaps = 5/48 (10%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSG 79
                T  K Y CN C    T+   +  H     Q I T ++   SG
Sbjct: 2  SSGSSGTDSKSYNCNECGKAFTRIFHLTRH-----QKIHTRKSGPSSG 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIHM 167
              + +G K + C ECG      + LR H +R+HM
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIH-QRVHM 36

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 8/32 (25%), Positives = 14/32 (43%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
               +GEK + C+ C       S++  H +V
Sbjct: 3  SGSSGSGEKSHTCDECGKNFCYISALRIHQRV 34

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 7/29 (24%), Positives = 12/29 (41%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                +GEK + C+ C       S++  H
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIH 31

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KPY C ECG     ++ L +H   IH
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARH-RGIH 35

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TGEKPY+CN C    TQNS +  H
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLARH 31

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKPY+CN C    TQNS +  H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARH 31

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              +  G  PY C++C  +      L  H +R+H
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVH-QRMH 35

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 6/32 (18%), Positives = 13/32 (40%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
                G  PY+C+ C+   +    +  H ++
Sbjct: 3  SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRM 34

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 6/29 (20%), Positives = 11/29 (37%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 G  PY+C+ C+   +    +  H
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVH 31

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 46
          Y+C  C      K  +  H R HT EKP   +
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN 327
           Y+C  C      K  +  H R HT EKP   +
Sbjct: 13  YKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KPY C ECG     ++ L +H   IH
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARH-RGIH 35

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
               TG+KPY+CN C    TQNS +  H
Sbjct: 3  SGSSGTGKKPYKCNECGKVFTQNSHLARH 31

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                TG+KPY+CN C    TQNS +  H
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARH 31

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              +  G KPY C+ECG +   S  L +H    H
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQH-WITH 35

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              +  G K Y C  CG     S+ L+ H +R+H
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTH-QRVH 35

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                GEK Y+C++C  + +Q+S +  H
Sbjct: 3  SGSSGMGEKCYKCDVCGKEFSQSSHLQTH 31

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 GEK Y+C++C  + +Q+S +  H
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTH 31

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              +G  PY C+ECG A      L  H +R H
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISH-QRTH 33

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
           RHIR HTG KP+ C  C      S  L  HI R H
Sbjct: 39  RHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 12/37 (32%), Positives = 24/37 (64%)

Query: 218 QSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           +S  + +H+R HTG++PF C +C  + ++  +L  H+
Sbjct: 33  RSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI 69

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 5/51 (9%)

Query: 18 FVCPYLSRHK-----GDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 63
          + CP  S  +      ++ +H+R HTG+KP++C +C    +++  +  H++
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR 70

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 5/51 (9%)

Query: 299 FVCPYLSRHK-----GDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
           + CP  S  +      ++ +H+R HTG+KP++C +C    +++  +  H++
Sbjct: 20  YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR 70

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + TG KPY C ECG     ++ L +H  R+H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARH-RRVH 35

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 61
                TGEKPY+CN C    TQNS +  H
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLARH 31

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 TGEKPY+CN C    TQNS +  H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARH 31

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 18/108 (16%), Positives = 30/108 (27%), Gaps = 42/108 (38%)

Query: 229 HTGRRPFPCDM--CEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAY 286
            +G    PCD   C    + +  L  H                    +H  Q        
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKK-----------------YQHIHQ-------- 36

Query: 287 LNDRRNVIMYRCFVCPYLS-----RHKGDVKKHVRKHTGEKPYECNLC 329
                     + F CP  +       K  +K+H++ H+  + Y C   
Sbjct: 37  ----------KSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 5/22 (22%), Positives = 10/22 (45%)

Query: 128 SNFLRHIRTHTGHKPYACTECG 149
            +   H++ H+  + Y C   G
Sbjct: 54  KHLKEHMKLHSDTRDYICEFSG 75

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 4/43 (9%)

Query: 127 RSNFLRHIR-THTGHKPYACTE--CGYASILSTDLRKHIERIH 166
           R     H +  H   K ++C E  CG +      L++H  ++H
Sbjct: 22  RQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEH-MKLH 63

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 37.5 bits (88), Expect = 4e-04
 Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 5/36 (13%)

Query: 18 FVCPYLS-----RHKGDVKKHVRKHTGEKPYECNLC 48
          F CP  +       K  +K+H++ H+  + Y C   
Sbjct: 39 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
               + +G +P+ C ECG      + L  H  R+H
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGH-LRLH 35

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 8/33 (24%), Positives = 17/33 (51%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
                +GE+P++CN C     + S +  H+++
Sbjct: 2  SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRL 34

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 8/30 (26%), Positives = 14/30 (46%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFH 342
                 +GE+P++CN C     + S +  H
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGH 31

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              + +G +PY C ECG      + L +H  + H
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEH-LKRH 35

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 38.8 bits (91), Expect = 6e-05
 Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              +G KPY+C EC      +  L +H +++H
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQH-QKMH 33

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 38.7 bits (91), Expect = 6e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              +G + Y C ECG +      L  H ERIH
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLH-ERIH 33

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 40.3 bits (94), Expect = 7e-05
 Identities = 12/33 (36%), Positives = 16/33 (48%)

Query: 114 WFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACT 146
           W +C R   S K +   + HIR HTG K    +
Sbjct: 62  WEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIHM 167
             R  TG KP+ C +C  +   S  L  H  + HM
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHR-KRHM 35

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 10/32 (31%), Positives = 12/32 (37%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
                GE PY C  C    TQ  S+  H + 
Sbjct: 2  SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRS 33

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 10/31 (32%), Positives = 12/31 (38%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
                 GE PY C  C    TQ  S+  H +
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQR 32

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.1 bits (84), Expect = 5e-04
 Identities = 9/34 (26%), Positives = 13/34 (38%), Gaps = 1/34 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              +  G  PY C +CG +      L  H +R  
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVH-QRSC 34

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 1/32 (3%)

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIH 166
              +G KP+ C+ C  A    + L  H ++ H
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVH-QQTH 33

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	353
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.9
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.9
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.89
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.88
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.88
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.87
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.85
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.84
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.83
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.82
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.81
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.78
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.77
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.76
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.75
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.74
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.73
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.73
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.73
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.72
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.7
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.68
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.68
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.66
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.65
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.65
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.64
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.63
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.63
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.62
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.62
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.6
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.6
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.59
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.59
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.58
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.56
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.56
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.55
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.55
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.55
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.54
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.54
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.54
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.53
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.52
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.52
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.52
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.51
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.5
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.49
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.48
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.47
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.46
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.46
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.43
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.42
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.41
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.37
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.37
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.36
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.36
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.35
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.35
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.35
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.32
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.29
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.28
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.27
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.27
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.27
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.25
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.25
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.24
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.21
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.21
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.21
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.17
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.17
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.16
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.15
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.15
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.14
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.14
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.14
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.13
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.13
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.13
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.12
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.12
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.11
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.06
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.05
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.01
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.0
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.0
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.99
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.99
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.98
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.97
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.97
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.96
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.96
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.95
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.95
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.95
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.95
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.94
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.94
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.94
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.93
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.93
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.92
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.92
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.91
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.91
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.91
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.9
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.9
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.89
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.89
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.89
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.89
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.88
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.88
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.88
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.88
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.88
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.88
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.88
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.87
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.87
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.87
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.87
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.87
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.86
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.85
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.84
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.82
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.81
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.8
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.8
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.79
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.75
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.75
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.75
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.74
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.74
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.72
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.71
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.71
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.66
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.66
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.64
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.63
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.62
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.59
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.58
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.56
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.53
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.49
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.43
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.43
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.42
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.42
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.38
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.38
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.36
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.32
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.31
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.31
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.31
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.3
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.29
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.27
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.26
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.25
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.25
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.24
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.22
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.2
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.2
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.19
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.19
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.19
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.49
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.49
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.18
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.18
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.18
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.16
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.15
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.14
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.13
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.11
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.1
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.1
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.08
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.06
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.06
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.05
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.32
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.32
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.03
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.29
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.02
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.0
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.15
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.9
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.86
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.63
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.51
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.11
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.66
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.56
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.16
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.11
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.68
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.51
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.43
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.36
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.13
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.09
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	89.56
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	88.65
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	88.1
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	87.95
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	87.89
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	86.92
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	86.2
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	84.95
3h0g_L	63	DNA-directed RNA polymerases I, II, and III subuni	84.9
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	84.65
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	84.29
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	82.59
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	81.64
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	81.34
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	80.95
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	80.48

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=2.5e-36  Score=244.87  Aligned_cols=184  Identities=29%  Similarity=0.535  Sum_probs=126.9

Q ss_pred             hhHHHHHhhhcCCCCccCCCCCccccChHHHHHHHHHhcCCccccCcccCccccccccccchHHHHHhhhcCCCCCCccc
Q psy1798         128 SNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGF  207 (353)
Q Consensus       128 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~c~~c~~~~~~~~~~~l~~h~~~~~~~~~~~~  207 (353)
                      ..|..|+..+.++++|.|+.|++.|.....|..| .+.|.+   ++++.|+.|++.|.+  ...|..|++.+.+  ..+|
T Consensus         7 ~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~---~~~~~C~~C~~~f~~--~~~l~~H~~~h~~--~~~~   78 (190)
T 2i13_A            7 SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEH-QRTHTG---EKPYKCPECGKSFSD--KKDLTRHQRTHTG--EKPY   78 (190)
T ss_dssp             ------------------------CCSSHHHHHG-GGCC------CCEECTTTCCEESS--HHHHHHHHHHHHC--CCCE
T ss_pred             ccchhhhhhcCCCCCCcCCCCccccCCHHHHHHH-HHHcCC---CCCccCCCcCchhCC--HHHHHHHHHhcCC--CCCc
Confidence            3444555555555555555555555555555555 344443   445555555555555  5555555555544  6789


Q ss_pred             ccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhc
Q psy1798         208 QCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYL  287 (353)
Q Consensus       208 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~  287 (353)
                      .|+.|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+..                               
T Consensus        79 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-------------------------------  127 (190)
T 2i13_A           79 KCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT-------------------------------  127 (190)
T ss_dssp             ECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHH-------------------------------
T ss_pred             cCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHH-------------------------------
Confidence            9999999999999999999999999999999999999999999999731                               


Q ss_pred             ccCCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCC
Q psy1798         288 NDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFI  352 (353)
Q Consensus       288 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  352 (353)
                        |+++++|+|.+|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|++++||
T Consensus       128 --h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          128 --HTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             --HHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             --hCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence              667789999999999999999999999999999999999999999999999999999999987

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=6.7e-35  Score=236.41  Aligned_cols=185  Identities=32%  Similarity=0.566  Sum_probs=136.3

Q ss_pred             hhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhcccccccccccccccCccccccccCCCcccchhHHHHHHhhcC
Q psy1798          27 KGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSATETELLDHCMQCS  106 (353)
Q Consensus        27 ~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~  106 (353)
                      ...|..|++.+.++++|.|+.|++.|.....|..|++.     +.++.+                               
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-----h~~~~~-------------------------------   49 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRT-----HTGEKP-------------------------------   49 (190)
T ss_dssp             -------------------------CCSSHHHHHGGGC-----C---CC-------------------------------
T ss_pred             hccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHH-----cCCCCC-------------------------------
Confidence            45678899999999999999999999999999999987     333333                               


Q ss_pred             CCCcCCCceecCCCCccCCCchhHHHHHhhhcCCCCccCCCCCccccChHHHHHHHHHhcCCccccCcccCccccccccc
Q psy1798         107 RDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHN  186 (353)
Q Consensus       107 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~c~~c~~~~~~  186 (353)
                              |.|++|++.|.+...|..|++.|.++++|.|+.|++.|.....|..|+ +.|.+                  
T Consensus        50 --------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~------------------  102 (190)
T 2i13_A           50 --------YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQ-RTHTG------------------  102 (190)
T ss_dssp             --------EECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH-HHHHT------------------
T ss_pred             --------ccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHH-HhcCC------------------
Confidence                    999999999999999999999999999999999999999999999994 44533                  


Q ss_pred             cchHHHHHhhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcC
Q psy1798         187 LDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGS  266 (353)
Q Consensus       187 ~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~  266 (353)
                                       .++|.|+.|++.|.+...|..|++.|.++++|.|+.|++.|.....|..|+..          
T Consensus       103 -----------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~----------  155 (190)
T 2i13_A          103 -----------------EKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRT----------  155 (190)
T ss_dssp             -----------------CCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH----------
T ss_pred             -----------------CCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHh----------
Confidence                             46688999999999999999999999999999999999999999999999732          


Q ss_pred             CCCccccccccccccccchhcccCCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCc
Q psy1798         267 RDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPY  324 (353)
Q Consensus       267 ~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  324 (353)
                                             |+++++|+|.+|++.|.+...|..|+++|++++||
T Consensus       156 -----------------------H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          156 -----------------------HTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             -----------------------HHCCCCEECTTTCCEESSHHHHHHHHTTC------
T ss_pred             -----------------------cCCCCCeECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence                                   67778999999999999999999999999999886

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=1.2e-29  Score=205.53  Aligned_cols=166  Identities=23%  Similarity=0.419  Sum_probs=141.6

Q ss_pred             CCceec--CCCCccCCCchhHHHHHhhhcCCCCccC--CCCCccccChHHHHHHHHHhcCCccccCcccCcccccccccc
Q psy1798         112 PGWFQC--FRCRYSNKFRSNFLRHIRTHTGHKPYAC--TECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNL  187 (353)
Q Consensus       112 ~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~c~~c~~~~~~~  187 (353)
                      .++|.|  +.|++.|.+...|..|++.|.++++|.|  +.|++.|.....|..| .+.|.+                   
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~~-------------------   69 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRH-SLTHTG-------------------   69 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHH-HTTTTT-------------------
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHH-HHHccC-------------------
Confidence            456999  6899999999999999999999999999  8899999999999999 455643                   


Q ss_pred             chHHHHHhhhcCCCCCCcccccc--cchhhccCHHHHHHHH-Hhh-hCCCCcCC--CCCCccccchhHHHHhhhhccccC
Q psy1798         188 DESFLLKHCKYCPSLRTVGFQCY--LCLYITRQSAHMRQHL-RKH-TGRRPFPC--DMCEYSAAQKWNLKMHMHFLCHHC  261 (353)
Q Consensus       188 ~~~~l~~h~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~~C~~C  261 (353)
                                      .++|.|.  .|++.|.+...|..|+ +.| .++++|.|  +.|++.|.+...|..|+..     
T Consensus        70 ----------------~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~-----  128 (190)
T 1tf6_A           70 ----------------EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFS-----  128 (190)
T ss_dssp             ----------------CCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGG-----
T ss_pred             ----------------CCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHH-----
Confidence                            4568888  7888888888999998 566 46788999  8899999999999888621     


Q ss_pred             CCCcCCCCccccccccccccccchhcccCCCcceeeCCC--CCCccCCcchHHHHHHHhcCCCCccCCC---CcccccCc
Q psy1798         262 NRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFV--CPYLSRHKGDVKKHVRKHTGEKPYECNL---CDYKATQN  336 (353)
Q Consensus       262 ~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~  336 (353)
                                                  |+++++|+|.+  |++.|.+...|..|+++|++   |.|.+   |++.|.+.
T Consensus       129 ----------------------------H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~  177 (190)
T 1tf6_A          129 ----------------------------HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTW  177 (190)
T ss_dssp             ----------------------------GSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCH
T ss_pred             ----------------------------hCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccH
Confidence                                        77778899987  99999999999999999987   88998   99999999


Q ss_pred             hHHHHHHhhhcCC
Q psy1798         337 SSIHFHMKLKHNM  349 (353)
Q Consensus       337 ~~l~~H~~~~h~~  349 (353)
                      ..|..|+++||++
T Consensus       178 ~~l~~H~~~h~~e  190 (190)
T 1tf6_A          178 TLYLKHVAECHQD  190 (190)
T ss_dssp             HHHHHHHTTCC--
T ss_pred             HHHHHHHHhhcCC
Confidence            9999999999874

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.95  E-value=1.8e-27  Score=192.56  Aligned_cols=166  Identities=26%  Similarity=0.446  Sum_probs=123.4

Q ss_pred             CCCceeec--CCCCCccCchhhhhhHhhhhcCCCCccc--CCCCcccccchhhhhhhhcccccccccccccccCcccccc
Q psy1798          10 RNVIMYRC--FVCPYLSRHKGDVKKHVRKHTGEKPYEC--NLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVH   85 (353)
Q Consensus        10 ~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~c~~   85 (353)
                      ...++|.|  +.|++.|.+...|..|++.|.++++|.|  +.|++.|.....|..|++.     +.++.+          
T Consensus         8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-----h~~~~~----------   72 (190)
T 1tf6_A            8 VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLT-----HTGEKN----------   72 (190)
T ss_dssp             --CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTT-----TTTCCC----------
T ss_pred             CCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHH-----ccCCCc----------
Confidence            34678999  6899999999999999999999999999  8899999999999999987     333333          


Q ss_pred             ccCCCcccchhHHHHHHhhcCCCCcCCCceecC--CCCccCCCchhHHHHH-hhh-cCCCCccC--CCCCccccChHHHH
Q psy1798          86 CYGDLSSATETELLDHCMQCSRDTCIPGWFQCF--RCRYSNKFRSNFLRHI-RTH-TGHKPYAC--TECGYASILSTDLR  159 (353)
Q Consensus        86 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~l~  159 (353)
                                                   |.|+  .|++.|.+...|..|+ +.| .++++|.|  +.|++.|.....|.
T Consensus        73 -----------------------------~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~  123 (190)
T 1tf6_A           73 -----------------------------FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLK  123 (190)
T ss_dssp             -----------------------------EECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHH
T ss_pred             -----------------------------eeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHH
Confidence                                         8999  8999999999999999 566 46778999  88999999999999


Q ss_pred             HHHHHhcCCccccCcccCcc--ccccccccchHHHHHhhhcCCCCCCccccccc---chhhccCHHHHHHHHHhhh
Q psy1798         160 KHIERIHMPQFVEDVRHCVH--CNKEMHNLDESFLLKHCKYCPSLRTVGFQCYL---CLYITRQSAHMRQHLRKHT  230 (353)
Q Consensus       160 ~H~~~~H~~~~~~~~~~c~~--c~~~~~~~~~~~l~~h~~~~~~~~~~~~~C~~---C~~~f~~~~~l~~H~~~h~  230 (353)
                      .| .+.|.+   +++|.|+.  |++.|.+  ...|..|++.|.+     |+|..   |++.|.+...|..|+++|+
T Consensus       124 ~H-~~~H~~---~~~~~C~~~~C~k~F~~--~~~L~~H~~~H~~-----~~C~~~~~C~~~f~~~~~l~~H~~~h~  188 (190)
T 1tf6_A          124 VH-QFSHTQ---QLPYECPHEGCDKRFSL--PSRLKRHEKVHAG-----YPCKKDDSCSFVGKTWTLYLKHVAECH  188 (190)
T ss_dssp             HH-HGGGSS---SCSSBCCSSSCCCBCSS--HHHHHHHHTSSCS-----CCCCSTTTCCCCCSCHHHHHHHHTTCC
T ss_pred             HH-HHHhCC---CCCccCCCCCCCchhcC--HHHHHHHHHHhCC-----CcCCCCCcCCCccccHHHHHHHHHhhc
Confidence            99 566765   45555544  5555554  4555555544433     44554   5555555555555555444

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=2e-26  Score=180.17  Aligned_cols=145  Identities=30%  Similarity=0.461  Sum_probs=122.6

Q ss_pred             CCccCCCCCccccChHHHHHHHHH--hcCCccccCcccCccccccccccchHHHHHhhhcCCCCCCcccccccchhhccC
Q psy1798         141 KPYACTECGYASILSTDLRKHIER--IHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQ  218 (353)
Q Consensus       141 ~~~~C~~C~~~f~~~~~l~~H~~~--~H~~~~~~~~~~c~~c~~~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~  218 (353)
                      .++.|+.|++.|.+...|..|+..  .|.+   ++++.|++|+                           |..|++.|.+
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~---~~~~~C~~c~---------------------------C~~c~~~f~~   51 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGE---RKEFVCHWGG---------------------------CSRELRPFKA   51 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSC---SSCCCCCBTT---------------------------CTTTTCCCSS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCC---CcceeCCCCC---------------------------ccchhhhhhh
Confidence            457777888888888888888554  3333   4455554432                           5667799999


Q ss_pred             HHHHHHHHHhhhCCCCcCCCC--CCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCccee
Q psy1798         219 SAHMRQHLRKHTGRRPFPCDM--CEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMY  296 (353)
Q Consensus       219 ~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~  296 (353)
                      ...|..|++.|.++++|.|+.  |++.|.+...|..|+..                                 |.++++|
T Consensus        52 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~---------------------------------h~~~~~~   98 (155)
T 2gli_A           52 QYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRS---------------------------------HTGEKPY   98 (155)
T ss_dssp             HHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHH---------------------------------TTTCCCE
T ss_pred             HHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHH---------------------------------cCCCCCe
Confidence            999999999999999999985  99999999999999732                                 7778899


Q ss_pred             eCCC--CCCccCCcchHHHHH-HHhcCCCCccCCC--CcccccCchHHHHHHhhhcC
Q psy1798         297 RCFV--CPYLSRHKGDVKKHV-RKHTGEKPYECNL--CDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       297 ~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~  348 (353)
                      .|.+  |++.|.+...|..|+ ++|.++++|.|++  |++.|.+...|..|+++|||
T Consensus        99 ~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           99 MCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             ECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             eCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            9998  999999999999999 7999999999998  99999999999999999986

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=9.6e-24  Score=164.88  Aligned_cols=139  Identities=26%  Similarity=0.420  Sum_probs=91.0

Q ss_pred             ceeecCCCCCccCchhhhhhHhh---hhcCCCCcccCCC-----CcccccchhhhhhhhcccccccccccccccCccccc
Q psy1798          13 IMYRCFVCPYLSRHKGDVKKHVR---KHTGEKPYECNLC-----DYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCV   84 (353)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~---~h~~~~~~~C~~C-----~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~c~   84 (353)
                      .+|+|..|++.|.+...|..|++   +|.+.++|.|++|     ++.|.....|..|++.     +.++.+         
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~-----h~~~~~---------   67 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR-----HTGEKP---------   67 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHH-----HHCCCC---------
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHh-----cCCCCC---------
Confidence            46788888888888888888887   5677778877643     3666666666666665     222222         


Q ss_pred             cccCCCcccchhHHHHHHhhcCCCCcCCCceecCC--CCccCCCchhHHHHHhhhcCCCCccCCC--CCccccChHHHHH
Q psy1798          85 HCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFR--CRYSNKFRSNFLRHIRTHTGHKPYACTE--CGYASILSTDLRK  160 (353)
Q Consensus        85 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~  160 (353)
                                                    |.|++  |++.|.+...|..|++.|.++++|.|+.  |++.|.....|..
T Consensus        68 ------------------------------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~  117 (155)
T 2gli_A           68 ------------------------------HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAK  117 (155)
T ss_dssp             ------------------------------CCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHH
T ss_pred             ------------------------------ccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHH
Confidence                                          66653  6666666666666666666666666666  6666666666666


Q ss_pred             HHHHhcCCccccCcccCccccccccccchHHHHHhhhcCCCCCCccccccc--chhhccCHHHHHHHHHhhh
Q psy1798         161 HIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYL--CLYITRQSAHMRQHLRKHT  230 (353)
Q Consensus       161 H~~~~H~~~~~~~~~~c~~c~~~~~~~~~~~l~~h~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~  230 (353)
                      |+.+.|.+                                   .++|.|+.  |++.|.+...|..|++.|+
T Consensus       118 H~~~~H~~-----------------------------------~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          118 HQNRTHSN-----------------------------------EKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             HHHHTTCS-----------------------------------CCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             HHHHhcCC-----------------------------------CCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence            64455543                                   34556655  6666666666666666654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=2.9e-23  Score=155.75  Aligned_cols=117  Identities=32%  Similarity=0.562  Sum_probs=106.2

Q ss_pred             CcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCcccccccccccccc
Q psy1798         204 TVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMG  283 (353)
Q Consensus       204 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~  283 (353)
                      ..+|+|+.|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+....                         
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~-------------------------   59 (124)
T 2dlq_A            5 SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNC-------------------------   59 (124)
T ss_dssp             CSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCC-------------------------
T ss_pred             CCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhh-------------------------
Confidence            6789999999999999999999999999999999999999999999999973100                         


Q ss_pred             chhcccCCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCC
Q psy1798         284 IAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMP  350 (353)
Q Consensus       284 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  350 (353)
                           .+..+++|.|.+|++.|.+...|..|+++|++++||.|++|++.|.+...|..|++.+|+..
T Consensus        60 -----~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           60 -----MNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             -----CCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             -----cCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence                 14567889999999999999999999999999999999999999999999999998766543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.89  E-value=3.4e-23  Score=155.31  Aligned_cols=115  Identities=26%  Similarity=0.462  Sum_probs=101.6

Q ss_pred             Ccccccc--cchhhccCHHHHHHHHHhhhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCcccccccccccc
Q psy1798         204 TVGFQCY--LCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSV  281 (353)
Q Consensus       204 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~  281 (353)
                      .++|.|+  .|++.|.+...|..|++.| ++++|.|+.|++.|.+...|..|+..                         
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~-------------------------   56 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLV-------------------------   56 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGG-------------------------
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHH-------------------------
Confidence            5679999  8999999999999999999 88999999999999999999999621                         


Q ss_pred             ccchhcccCCCcceeeCCC--CCCccCCcchHHHHHHHhcCCCCccCC--CCcccccCchHHHHHHhhhcCCCCC
Q psy1798         282 MGIAYLNDRRNVIMYRCFV--CPYLSRHKGDVKKHVRKHTGEKPYECN--LCDYKATQNSSIHFHMKLKHNMPFI  352 (353)
Q Consensus       282 ~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~  352 (353)
                              |.++++|.|.+  |++.|.+...|..|+++|+++++|.|+  .|++.|.+...|..|+++|++++++
T Consensus        57 --------h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           57 --------HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             --------TSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             --------cCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence                    77788999986  999999999999999999999999996  5999999999999999999999886

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=2.5e-22  Score=150.56  Aligned_cols=119  Identities=29%  Similarity=0.475  Sum_probs=107.6

Q ss_pred             CCCCceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhcccccccccccccccCccccccccC
Q psy1798           9 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYG   88 (353)
Q Consensus         9 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~c~~c~~   88 (353)
                      ..+..+|+|++|++.|.+...|..|++.|.++++|.|+.|++.|.....|..|++.++.  +..+               
T Consensus         2 s~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~--~~~~---------------   64 (124)
T 2dlq_A            2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCM--NRSE---------------   64 (124)
T ss_dssp             CCCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCC--CSCC---------------
T ss_pred             CCCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhc--CCCC---------------
Confidence            35678899999999999999999999999999999999999999999999999986321  1222               


Q ss_pred             CCcccchhHHHHHHhhcCCCCcCCCceecCCCCccCCCchhHHHHHhhhcCCCCccCCCCCccccChHHHHHHHHHhcCC
Q psy1798          89 DLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMP  168 (353)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  168 (353)
                                              .+|.|++|++.|.+...|..|++.|.++++|.|+.|++.|.....|..|+...|.+
T Consensus        65 ------------------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           65 ------------------------QVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             ------------------------CCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             ------------------------CCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence                                    34999999999999999999999999999999999999999999999998888976

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.88  E-value=1.2e-22  Score=151.20  Aligned_cols=110  Identities=31%  Similarity=0.588  Sum_probs=103.2

Q ss_pred             Cccccccc--chhhccCHHHHHHHHHhhhCCCCcCCC--CCCccccchhHHHHhhhhccccCCCCcCCCCcccccccccc
Q psy1798         204 TVGFQCYL--CLYITRQSAHMRQHLRKHTGRRPFPCD--MCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQC  279 (353)
Q Consensus       204 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~  279 (353)
                      .++|.|..  |++.|.+...|..|++.|.++++|.|+  .|++.|.....|..|+..                       
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-----------------------   60 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR-----------------------   60 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHH-----------------------
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHH-----------------------
Confidence            67899997  999999999999999999999999999  799999999999999732                       


Q ss_pred             ccccchhcccCCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccC--CCCcccccCchHHHHHHhhh
Q psy1798         280 SVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYEC--NLCDYKATQNSSIHFHMKLK  346 (353)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~  346 (353)
                                |.++++|.|.+|++.|.+...|..|+++|+++++|.|  ++|++.|.+...|..|+++|
T Consensus        61 ----------h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           61 ----------HTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             ----------HHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             ----------cCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence                      6677889999999999999999999999999999999  89999999999999999876

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.87  E-value=1.8e-22  Score=157.55  Aligned_cols=117  Identities=23%  Similarity=0.367  Sum_probs=106.0

Q ss_pred             CcccccccchhhccCHHHHHHHHHh-hhCCCC--------cCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccc
Q psy1798         204 TVGFQCYLCLYITRQSAHMRQHLRK-HTGRRP--------FPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIE  274 (353)
Q Consensus       204 ~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~  274 (353)
                      ...|.|..|++.|.+...|..|++. |.++.+        |.|+.|++.|.....|..|+..                  
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~------------------   84 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV------------------   84 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHH------------------
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHh------------------
Confidence            5679999999999999999999997 766654        7899999999999999998621                  


Q ss_pred             cccccccccchhcccCCCcceeeCCC--CCCccCCcchHHHHHHHhcCCCCccCCC--CcccccCchHHHHHHhhhcCCC
Q psy1798         275 HSTQCSVMGIAYLNDRRNVIMYRCFV--CPYLSRHKGDVKKHVRKHTGEKPYECNL--CDYKATQNSSIHFHMKLKHNMP  350 (353)
Q Consensus       275 h~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~  350 (353)
                                     |.++++|.|.+  |++.|.+...|..|+++|+++++|.|.+  |++.|.+...|..|+++|++++
T Consensus        85 ---------------h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k  149 (155)
T 2rpc_A           85 ---------------HTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK  149 (155)
T ss_dssp             ---------------HHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCC
T ss_pred             ---------------cCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCC
Confidence                           66778899998  9999999999999999999999999997  9999999999999999999999


Q ss_pred             CCC
Q psy1798         351 FIP  353 (353)
Q Consensus       351 ~~~  353 (353)
                      ||+
T Consensus       150 ~~~  152 (155)
T 2rpc_A          150 SGP  152 (155)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            986

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.85  E-value=4.9e-22  Score=149.67  Aligned_cols=101  Identities=17%  Similarity=0.312  Sum_probs=92.2

Q ss_pred             CcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCcccccccccccccc
Q psy1798         204 TVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMG  283 (353)
Q Consensus       204 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~  283 (353)
                      +++|+|+.|++.|.+...|..|+++|.+++||.|+.|++.|.....|..|+..                           
T Consensus        20 ek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~---------------------------   72 (133)
T 2lt7_A           20 RVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIH---------------------------   72 (133)
T ss_dssp             EEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHH---------------------------
T ss_pred             CcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccc---------------------------
Confidence            78899999999999999999999999999999999999999999999999732                           


Q ss_pred             chhcccCCCcceeeCCCCCCccCCcchHHHHHHHhcCCC------CccCCCCcccccCch
Q psy1798         284 IAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEK------PYECNLCDYKATQNS  337 (353)
Q Consensus       284 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~------~~~C~~C~~~f~~~~  337 (353)
                            |++++||.|.+|+++|.+...|..|+++|++++      +|.|.+|++.|....
T Consensus        73 ------H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~  126 (133)
T 2lt7_A           73 ------HTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQY  126 (133)
T ss_dssp             ------HHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCCC
T ss_pred             ------cCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhcc
Confidence                  778899999999999999999999999998764      589999999886543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.84  E-value=3.9e-21  Score=149.93  Aligned_cols=130  Identities=22%  Similarity=0.322  Sum_probs=107.6

Q ss_pred             cCCCCccCCCCCccccChHHHHHHHHHhcCCccccCcccCccccccccccchHHHHHhhhcCCCCCCcccccccchhhcc
Q psy1798         138 TGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITR  217 (353)
Q Consensus       138 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~c~~c~~~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~  217 (353)
                      .++.+|.|+.|++.|.....|..|+...|.+......+.                           ...|.|..|++.|.
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~---------------------------~~~~~C~~C~~~f~   73 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHV---------------------------CYWEECPREGKSFK   73 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCC---------------------------CCBTTCTTSSCCCS
T ss_pred             hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCcc---------------------------ccccCCCCcccccC
Confidence            345678888888888888888888655576521111110                           12378999999999


Q ss_pred             CHHHHHHHHHhhhCCCCcCCCC--CCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCcce
Q psy1798         218 QSAHMRQHLRKHTGRRPFPCDM--CEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIM  295 (353)
Q Consensus       218 ~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~  295 (353)
                      +...|..|++.|.++++|.|+.  |++.|.....|..|+.                                 .|+++++
T Consensus        74 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~---------------------------------~h~~~~~  120 (155)
T 2rpc_A           74 AKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKR---------------------------------THTGEKP  120 (155)
T ss_dssp             SHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHT---------------------------------TTCSSCS
T ss_pred             CHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHH---------------------------------hhCCCCC
Confidence            9999999999999999999998  9999999999999972                                 1778889


Q ss_pred             eeCCC--CCCccCCcchHHHHHHHhcCCCCccCC
Q psy1798         296 YRCFV--CPYLSRHKGDVKKHVRKHTGEKPYECN  327 (353)
Q Consensus       296 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (353)
                      |.|.+  |++.|.+...|..|+++|++++||.|.
T Consensus       121 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          121 FKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             BCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             ccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            99997  999999999999999999999999985

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.83  E-value=8.7e-21  Score=141.03  Aligned_cols=112  Identities=30%  Similarity=0.598  Sum_probs=101.7

Q ss_pred             CCCceeecCC--CCCccCchhhhhhHhhhhcCCCCcccC--CCCcccccchhhhhhhhcccccccccccccccCcccccc
Q psy1798          10 RNVIMYRCFV--CPYLSRHKGDVKKHVRKHTGEKPYECN--LCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVH   85 (353)
Q Consensus        10 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~c~~   85 (353)
                      .++++|.|.+  |++.|.+...|..|++.|.+.++|.|+  .|++.|.....|..|++.     +.++.+          
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-----h~~~~~----------   66 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR-----HTGVKP----------   66 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHH-----HHCCCC----------
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHH-----cCCCCC----------
Confidence            3568899997  999999999999999999999999999  799999999999999987     444434          


Q ss_pred             ccCCCcccchhHHHHHHhhcCCCCcCCCceecCCCCccCCCchhHHHHHhhhcCCCCccC--CCCCccccChHHHHHHHH
Q psy1798          86 CYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYAC--TECGYASILSTDLRKHIE  163 (353)
Q Consensus        86 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~  163 (353)
                                                   |.|++|++.|.+...|..|++.|.++++|.|  +.|++.|.....|..| .
T Consensus        67 -----------------------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H-~  116 (119)
T 2jp9_A           67 -----------------------------FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH-H  116 (119)
T ss_dssp             -----------------------------EECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHH-H
T ss_pred             -----------------------------ccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHH-H
Confidence                                         9999999999999999999999999999999  8999999999999999 4


Q ss_pred             Hhc
Q psy1798         164 RIH  166 (353)
Q Consensus       164 ~~H  166 (353)
                      +.|
T Consensus       117 ~~H  119 (119)
T 2jp9_A          117 NMH  119 (119)
T ss_dssp             HTC
T ss_pred             hcC
Confidence            444

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.82  E-value=7.2e-21  Score=143.27  Aligned_cols=54  Identities=22%  Similarity=0.375  Sum_probs=27.4

Q ss_pred             CCceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhc
Q psy1798          11 NVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV   64 (353)
Q Consensus        11 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~   64 (353)
                      |.++|+|.+|++.|.....|..|+++|.+++||.|++|++.|.....|..|++.
T Consensus        19 Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~   72 (133)
T 2lt7_A           19 GRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIH   72 (133)
T ss_dssp             TEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccc
Confidence            444455555555555555555555555555555555555555555555555443

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.81  E-value=5.7e-20  Score=137.64  Aligned_cols=111  Identities=30%  Similarity=0.526  Sum_probs=98.4

Q ss_pred             CceeecC--CCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhcccccccccccccccCccccccccCC
Q psy1798          12 VIMYRCF--VCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGD   89 (353)
Q Consensus        12 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~c~~c~~~   89 (353)
                      .++|.|+  .|++.|.+...|..|++.| +.++|.|+.|++.|.....|..|++.     +.++.+              
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~-----h~~~~~--------------   62 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLV-----HTGEKP--------------   62 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGG-----TSCCCC--------------
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHH-----cCCCCC--------------
Confidence            4679999  8999999999999999999 88999999999999999999999987     444444              


Q ss_pred             CcccchhHHHHHHhhcCCCCcCCCceecCC--CCccCCCchhHHHHHhhhcCCCCccCC--CCCccccChHHHHHHHHHh
Q psy1798          90 LSSATETELLDHCMQCSRDTCIPGWFQCFR--CRYSNKFRSNFLRHIRTHTGHKPYACT--ECGYASILSTDLRKHIERI  165 (353)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~  165 (353)
                                               |.|.+  |++.|.+...|..|++.|.++++|.|+  .|++.|.....|..| .+.
T Consensus        63 -------------------------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H-~~~  116 (124)
T 1ubd_C           63 -------------------------FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH-ILT  116 (124)
T ss_dssp             -------------------------EECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHH-HHH
T ss_pred             -------------------------eeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHH-HHH
Confidence                                     99976  999999999999999999999999996  599999999999999 556


Q ss_pred             cCC
Q psy1798         166 HMP  168 (353)
Q Consensus       166 H~~  168 (353)
                      |.+
T Consensus       117 H~~  119 (124)
T 1ubd_C          117 HAK  119 (124)
T ss_dssp             HC-
T ss_pred             Hcc
Confidence            655

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=5.1e-19  Score=126.04  Aligned_cols=91  Identities=26%  Similarity=0.613  Sum_probs=79.4

Q ss_pred             hhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCcceeeCCCCCCccCCc
Q psy1798         229 HTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHK  308 (353)
Q Consensus       229 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~  308 (353)
                      +.++++|.|+.|++.|.....|..|+..                                 |.++++|.|.+|++.|.+.
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~---------------------------------h~~~~~~~C~~C~~~f~~~   49 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRC---------------------------------HTGVKPYKCKTCDYAAADS   49 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGG---------------------------------CCCCCSEECSSSCCEESSH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHh---------------------------------cCCCCCEeCCCCCCccCCH
Confidence            3567888888898888888888888621                                 6667789999999999999


Q ss_pred             chHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCC
Q psy1798         309 GDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFI  352 (353)
Q Consensus       309 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  352 (353)
                      ..|..|+++|+++++|.|.+|++.|.+...|..|+++|+++++.
T Consensus        50 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           50 SSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             HHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCCC
T ss_pred             HHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            99999999999999999999999999999999999999998764

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.77  E-value=5.1e-19  Score=128.52  Aligned_cols=91  Identities=22%  Similarity=0.469  Sum_probs=83.9

Q ss_pred             hCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCcceeeCCCCCCccCCcc
Q psy1798         230 TGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKG  309 (353)
Q Consensus       230 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~  309 (353)
                      ..+++|.|+.|++.|.....|..|+..                                 |.++++|.|.+|++.|.+..
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~---------------------------------h~~~~~~~C~~C~~~f~~~~   59 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERT---------------------------------HTDERPYTCDICHKAFRRQD   59 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHH---------------------------------HCCSCCCBCSSSCCBCSCHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHH---------------------------------cCCCCCcCCCCccchhCCHH
Confidence            456789999999999999999999732                                 66778999999999999999


Q ss_pred             hHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         310 DVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       310 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .|..|+++|+++++|.|.+|++.|.+...|..|+++|++++||+
T Consensus        60 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           60 HLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             HHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCC
T ss_pred             HHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCc
Confidence            99999999999999999999999999999999999999999985

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.76  E-value=3.7e-19  Score=113.25  Aligned_cols=59  Identities=25%  Similarity=0.476  Sum_probs=55.8

Q ss_pred             cceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCC
Q psy1798         293 VIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPF  351 (353)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  351 (353)
                      ++||+|.+||++|.+...|..|+++|++++||.|++||++|.+...|..|+++|+|++.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgepa   60 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKPA   60 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC--
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCCC
Confidence            58999999999999999999999999999999999999999999999999999999863

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.75  E-value=9.2e-19  Score=123.10  Aligned_cols=88  Identities=25%  Similarity=0.543  Sum_probs=77.6

Q ss_pred             CCCCcCCC--CCCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCcceeeCCCCCCccCCc
Q psy1798         231 GRRPFPCD--MCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHK  308 (353)
Q Consensus       231 ~~~~~~C~--~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~  308 (353)
                      +++||.|+  .|++.|.....|..|+..                                 |.++++|.|.+|++.|.+.
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~---------------------------------h~~~~~~~C~~C~~~f~~~   47 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRI---------------------------------HTGQKPFQCRICMRNFSRS   47 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHH---------------------------------HHCCCCEECTTTCCEESCH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHH---------------------------------hCCCCCccCCCCCcccCCH
Confidence            46899998  699999999999999731                                 5667889999999999999


Q ss_pred             chHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCC
Q psy1798         309 GDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPF  351 (353)
Q Consensus       309 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  351 (353)
                      ..|..|+++|+++++|.|++|++.|.+...|..|+++|+++++
T Consensus        48 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           48 DHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             HHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC---
T ss_pred             HHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccCC
Confidence            9999999999999999999999999999999999999999763

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=4.3e-19  Score=129.11  Aligned_cols=92  Identities=14%  Similarity=0.176  Sum_probs=70.7

Q ss_pred             HHhhhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCcceeeCCCCCCcc
Q psy1798         226 LRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLS  305 (353)
Q Consensus       226 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f  305 (353)
                      ++.|.++++|.|+.|++.|.....|..|+..                                 |  .++|+|.+|++.|
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~---------------------------------H--~~~~~C~~C~~~f   52 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERL---------------------------------C--RNAAVCPYCSLRF   52 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHH---------------------------------H--HHSBCCTTTCCCB
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHH---------------------------------C--CCCccCCCCCCcc
Confidence            4556777788888888888888777777621                                 2  2467888888888


Q ss_pred             CCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHh-hhcCCCCCC
Q psy1798         306 RHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK-LKHNMPFIP  353 (353)
Q Consensus       306 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~h~~~~~~  353 (353)
                      .+...|..|+. |.++++|.|.+|++.|.+...|..|++ .|.+++|||
T Consensus        53 ~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~  100 (107)
T 1wjp_A           53 FSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAP  100 (107)
T ss_dssp             SSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCC
T ss_pred             CCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCC
Confidence            88888888885 888888888888888888888888886 777777775

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.73  E-value=2.3e-18  Score=118.80  Aligned_cols=82  Identities=30%  Similarity=0.551  Sum_probs=74.7

Q ss_pred             CcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCcceeeCCCCCCccCCcchHHH
Q psy1798         234 PFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKK  313 (353)
Q Consensus       234 ~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~  313 (353)
                      ||.|+.|++.|.....|..|+..                                 |.++++|.|.+|++.|.+...|..
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~---------------------------------h~~~~~~~C~~C~~~f~~~~~l~~   47 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLI---------------------------------HSDTRPYPCQYCGKRFHQKSDMKK   47 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHH---------------------------------HHTCCCEECSSSCCEESSHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHH---------------------------------cCCCCCeeCCcCChhhCCHHHHHH
Confidence            58899999999999999888631                                 566788999999999999999999


Q ss_pred             HHHHhcCCCCccCCCCcccccCchHHHHHHhhhcC
Q psy1798         314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       314 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      |+++|+++++|.|++|++.|.+...|..|+++|+|
T Consensus        48 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           48 HTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             HHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             HHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            99999999999999999999999999999999986

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.73  E-value=8.3e-20  Score=134.81  Aligned_cols=100  Identities=16%  Similarity=0.127  Sum_probs=68.0

Q ss_pred             HHHHHHhhhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCcce-eeCCC
Q psy1798         222 MRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIM-YRCFV  300 (353)
Q Consensus       222 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~-~~C~~  300 (353)
                      |..|+++|.+++||.|+.|++.|.....|..|+.. -                              .+...++ +.|.+
T Consensus         7 l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-~------------------------------~h~~~~~~~~C~~   55 (115)
T 2dmi_A            7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE-T------------------------------GHYRDDNHETDNN   55 (115)
T ss_dssp             CCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHH-T------------------------------CCCBCSCCCCCCC
T ss_pred             hhhheeeeCCCCCEECCccCchhcCHHHHHHHHHH-h------------------------------CccccCCCccCCC
Confidence            45566677777777777777777777777777521 0                              0222232 34777


Q ss_pred             CCCcc--CCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCC
Q psy1798         301 CPYLS--RHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFI  352 (353)
Q Consensus       301 C~~~f--~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  352 (353)
                      |++.|  .....|..|+++|++++||.|.+|++.|.+...|..|+++||.....
T Consensus        56 C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~  109 (115)
T 2dmi_A           56 NPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKV  109 (115)
T ss_dssp             CCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTCS
T ss_pred             CCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcccC
Confidence            77777  77777777777777777778877888887777888887777765543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.73  E-value=1.4e-17  Score=120.82  Aligned_cols=91  Identities=21%  Similarity=0.350  Sum_probs=84.6

Q ss_pred             CCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccc
Q psy1798         203 RTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVM  282 (353)
Q Consensus       203 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~  282 (353)
                      ..++|.|..|++.|.+...|..|++.|.++++|.|+.|++.|.....|..|+..                          
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--------------------------   67 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYI--------------------------   67 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGG--------------------------
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHH--------------------------
Confidence            467899999999999999999999999999999999999999999999999621                          


Q ss_pred             cchhcccCCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccC
Q psy1798         283 GIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYEC  326 (353)
Q Consensus       283 ~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  326 (353)
                             |.++++|+|.+|++.|.+...|..|+++|.++++|.+
T Consensus        68 -------h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           68 -------HSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             -------SCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             -------hCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence                   7778899999999999999999999999999999865

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.4e-17  Score=118.33  Aligned_cols=87  Identities=26%  Similarity=0.501  Sum_probs=78.2

Q ss_pred             hCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCcceeeCCCCCCccCCcc
Q psy1798         230 TGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKG  309 (353)
Q Consensus       230 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~  309 (353)
                      .++++|.|+.|++.|.....|..|+..                                 |.++++|.|.+|++.|.+..
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~---------------------------------h~~~~~~~C~~C~~~f~~~~   49 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLS---------------------------------HSGEKPYSCPVCGLRFKRKD   49 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHH---------------------------------SCSSCSEECSSSCCEESCHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHh---------------------------------cCCCCCCcCCCCCCccCCHH
Confidence            467899999999999999999999732                                 67778999999999999999


Q ss_pred             hHHHHHHHhcCC--CCccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         310 DVKKHVRKHTGE--KPYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       310 ~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      .|..|+++|+++  ++|.|.+|++.|.+...|..|++..|..
T Consensus        50 ~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   91 (95)
T 2yt9_A           50 RMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSG   91 (95)
T ss_dssp             HHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCC
T ss_pred             HHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCC
Confidence            999999999987  8999999999999999999999754443

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=1e-17  Score=122.40  Aligned_cols=59  Identities=32%  Similarity=0.537  Sum_probs=38.9

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      |.++++|.|.+|++.|.+...|..|+++|+++++|.|.+|++.|.+...|..|+++|+.
T Consensus        32 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           32 HLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             HSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             cCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHccc
Confidence            44445566666666666666666666666666667777777777777777777666653

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.68  E-value=3.5e-17  Score=112.75  Aligned_cols=82  Identities=30%  Similarity=0.590  Sum_probs=75.2

Q ss_pred             ccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccch
Q psy1798         206 GFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIA  285 (353)
Q Consensus       206 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~  285 (353)
                      +|+|..|++.|.+...|..|++.|.++++|.|+.|++.|.....|..|+..                             
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-----------------------------   51 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI-----------------------------   51 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHH-----------------------------
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHH-----------------------------
Confidence            488999999999999999999999999999999999999999999999732                             


Q ss_pred             hcccCCCcceeeCCCCCCccCCcchHHHHHHHhcC
Q psy1798         286 YLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTG  320 (353)
Q Consensus       286 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  320 (353)
                          |.++++|.|.+|++.|.+...|..|+++|++
T Consensus        52 ----h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           52 ----HTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             ----HHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             ----hcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence                6677889999999999999999999999974

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=9.5e-17  Score=114.15  Aligned_cols=89  Identities=36%  Similarity=0.702  Sum_probs=67.1

Q ss_pred             CCCceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhcccccccccccccccCccccccccCC
Q psy1798          10 RNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGD   89 (353)
Q Consensus        10 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~c~~c~~~   89 (353)
                      .+.++|+|.+|++.|.+...|..|++.|.+.++|.|+.|++.|.....|..|++.     +..+.+              
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-----h~~~~~--------------   64 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI-----HSDERP--------------   64 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHH-----SCCCCC--------------
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHH-----hCCCCC--------------
Confidence            4567788888888888888888888888887888888888888888888888776     333333              


Q ss_pred             CcccchhHHHHHHhhcCCCCcCCCceecCCCCccCCCchhHHHHHhhhcCCCC
Q psy1798          90 LSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKP  142 (353)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  142 (353)
                                               |.|++|++.|.+...|..|++.|+++++
T Consensus        65 -------------------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           65 -------------------------FKCQICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             -------------------------EECSSSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             -------------------------ccCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence                                     7777777777777777777777776643

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.66  E-value=7.1e-17  Score=117.25  Aligned_cols=88  Identities=15%  Similarity=0.158  Sum_probs=81.5

Q ss_pred             CcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCcccccccccccccc
Q psy1798         204 TVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMG  283 (353)
Q Consensus       204 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~  283 (353)
                      .++|+|..|++.|.+...|..|++.|.  ++|.|+.|++.|.....|..|+.                            
T Consensus        14 ~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~----------------------------   63 (107)
T 1wjp_A           14 KEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES----------------------------   63 (107)
T ss_dssp             CCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH----------------------------
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH----------------------------
Confidence            778999999999999999999999994  69999999999999999999962                            


Q ss_pred             chhcccCCCcceeeCCCCCCccCCcchHHHHHH-HhcCCCCccCC
Q psy1798         284 IAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVR-KHTGEKPYECN  327 (353)
Q Consensus       284 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~  327 (353)
                            |+++++|+|.+|++.|.+...|..|++ +|.++++|.|.
T Consensus        64 ------H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           64 ------KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             ------HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             ------cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence                  677889999999999999999999997 99999999874

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.65  E-value=2.8e-16  Score=115.73  Aligned_cols=102  Identities=13%  Similarity=0.105  Sum_probs=83.8

Q ss_pred             HHHHhhhcCCCCCCcccccccchhhccCHHHHHHHHHh--hhCCCCcC-CCCCCccc--cchhHHHHhhhhccccCCCCc
Q psy1798         191 FLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRK--HTGRRPFP-CDMCEYSA--AQKWNLKMHMHFLCHHCNRFG  265 (353)
Q Consensus       191 ~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~~C~~C~~~~  265 (353)
                      .|..|++.|.+  .++|.|..|++.|.+...|..|++.  |.+++++. |+.|++.|  ....                 
T Consensus         6 ~l~~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~-----------------   66 (115)
T 2dmi_A            6 SGKLYGSIFTG--ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR-----------------   66 (115)
T ss_dssp             CCCCCCCCCCC--CCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCC-----------------
T ss_pred             hhhhheeeeCC--CCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHH-----------------
Confidence            45667777765  7889999999999999999999998  77777665 99999888  5544                 


Q ss_pred             CCCCccccccccccccccchhcccCCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCC
Q psy1798         266 SRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN  327 (353)
Q Consensus       266 ~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (353)
                           .|..|++.           |+++++|+|.+|++.|.+...|..|+++|+.......+
T Consensus        67 -----~l~~H~~~-----------H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           67 -----SLLEMEGK-----------EDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             -----CCCCCCCS-----------CCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             -----HHHHHhhc-----------cCCCcceECCCCCCccCCHHHHHHHHHHhCCcccCCCC
Confidence                 44555555           88899999999999999999999999998877665554

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.65  E-value=1.2e-16  Score=112.08  Aligned_cols=86  Identities=27%  Similarity=0.546  Sum_probs=63.2

Q ss_pred             CceeecC--CCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhcccccccccccccccCccccccccCC
Q psy1798          12 VIMYRCF--VCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGD   89 (353)
Q Consensus        12 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~c~~c~~~   89 (353)
                      +++|.|+  .|++.|.....|..|++.|.+.++|.|+.|++.|.....|..|++.     +.++.+              
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-----h~~~~~--------------   62 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT-----HTGEKP--------------   62 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH-----HHCCCC--------------
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHH-----cCCCCC--------------
Confidence            4678887  5888888888888888888888888888888888888888888765     333333              


Q ss_pred             CcccchhHHHHHHhhcCCCCcCCCceecCCCCccCCCchhHHHHHhhhcCCC
Q psy1798          90 LSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHK  141 (353)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  141 (353)
                                               |.|++|++.|.+...|..|+++|++++
T Consensus        63 -------------------------~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           63 -------------------------FACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             -------------------------EECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             -------------------------ccCCCCCchhCCHHHHHHHHHHhcccC
Confidence                                     777777777777777777777777654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.64  E-value=3.8e-16  Score=111.88  Aligned_cols=85  Identities=29%  Similarity=0.630  Sum_probs=77.1

Q ss_pred             CCCCcCCCC--CCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCcceeeCC--CCCCccC
Q psy1798         231 GRRPFPCDM--CEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCF--VCPYLSR  306 (353)
Q Consensus       231 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~  306 (353)
                      ..++|.|..  |++.|.....|..|+..                                 |.++++|.|.  .|++.|.
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~---------------------------------h~~~~~~~C~~~~C~~~f~   58 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRT---------------------------------HTGEKPYKCTWEGCDWRFA   58 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHH---------------------------------HSCCCCEECCSSSCCCEES
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHH---------------------------------hCCCCCeeCCCCCCCCccC
Confidence            457899986  99999999999999732                                 6677889996  6999999


Q ss_pred             CcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcC
Q psy1798         307 HKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       307 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      +...|..|+++|+++++|.|.+|++.|.+...|..|+++|++
T Consensus        59 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           59 RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             SHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            999999999999999999999999999999999999999975

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=2.1e-16  Score=105.23  Aligned_cols=64  Identities=28%  Similarity=0.518  Sum_probs=62.0

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      ++++++|+|.+|++.|.+...|..|+++|.++++|.|.+|++.|.....|..|+++||+++|.|
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            7788999999999999999999999999999999999999999999999999999999999987

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.63  E-value=4.5e-16  Score=108.91  Aligned_cols=83  Identities=27%  Similarity=0.601  Sum_probs=75.6

Q ss_pred             CCCcCCCC--CCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCcceeeCC--CCCCccCC
Q psy1798         232 RRPFPCDM--CEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCF--VCPYLSRH  307 (353)
Q Consensus       232 ~~~~~C~~--C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~  307 (353)
                      ..+|.|+.  |++.|.....|..|+.                                 .|.++++|.|.  .|++.|.+
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~---------------------------------~h~~~~~~~C~~~~C~~~f~~   49 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLR---------------------------------THTGEKPYHCDWDGCGWKFAR   49 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHT---------------------------------TSCSSCCEECCSTTTCCEESS
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHH---------------------------------hcCCCCCcCCCCCCCCCccCC
Confidence            56799998  9999999999999972                                 16777899997  69999999


Q ss_pred             cchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhc
Q psy1798         308 KGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKH  347 (353)
Q Consensus       308 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  347 (353)
                      ...|..|+++|+++++|.|++|++.|.+...|..|+++|.
T Consensus        50 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           50 SDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             HHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             HHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            9999999999999999999999999999999999999873

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=1.1e-15  Score=108.45  Aligned_cols=55  Identities=24%  Similarity=0.596  Sum_probs=34.1

Q ss_pred             CCCceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhc
Q psy1798          10 RNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV   64 (353)
Q Consensus        10 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~   64 (353)
                      .+.++|.|.+|++.|.+...|..|+++|.++++|.|+.|++.|.....|..|++.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   57 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS   57 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHH
Confidence            3455666666666666666666666666666666666666666665555555544

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.62  E-value=5.7e-16  Score=104.27  Aligned_cols=64  Identities=28%  Similarity=0.533  Sum_probs=61.5

Q ss_pred             cCCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCC
Q psy1798         289 DRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFI  352 (353)
Q Consensus       289 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  352 (353)
                      .+.++++|+|.+|++.|.+...|..|+++|.++++|.|.+|++.|.....|..|+++|++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3677889999999999999999999999999999999999999999999999999999999997

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.60  E-value=4.4e-17  Score=113.85  Aligned_cols=85  Identities=14%  Similarity=0.244  Sum_probs=77.5

Q ss_pred             CCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCcceeeCCCCCCccCCcchH
Q psy1798         232 RRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDV  311 (353)
Q Consensus       232 ~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l  311 (353)
                      ++||.|+.|++.|.....|..|+..                                 |.++++|.|.+|++.|.+...|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~---------------------------------H~~~~~~~C~~C~k~f~~~~~L   47 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRT---------------------------------HTGEKPFACDICGRKFARSDER   47 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHH---------------------------------HHCCCCEECTTTCCEESSHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHH---------------------------------cCCCCCccCCCCCCccCCHHHH
Confidence            5789999999999999999999732                                 6677899999999999999999


Q ss_pred             HHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCC
Q psy1798         312 KKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMP  350 (353)
Q Consensus       312 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  350 (353)
                      ..|+++|++ .+|.|..|++.|.+...|..|++.+|+..
T Consensus        48 ~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~~h~~~   85 (88)
T 1llm_C           48 KRHRDIQHI-LPILEDKVEELLSKNYHLENEVARLKKLV   85 (88)
T ss_dssp             HHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHHHHHHh
Confidence            999999985 88999999999999999999999998754

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=3.3e-16  Score=111.57  Aligned_cols=76  Identities=14%  Similarity=0.222  Sum_probs=68.6

Q ss_pred             CCCccccccccccccccchhcccCCCcceeeCCCCCCccC-CcchHHHHHHHhcC-CCCccCCCCcccccCchHHHHHHh
Q psy1798         267 RDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSR-HKGDVKKHVRKHTG-EKPYECNLCDYKATQNSSIHFHMK  344 (353)
Q Consensus       267 ~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~  344 (353)
                      .....+..|++.           |+++++|+|.+|++.|. ....|..|+++|++ +++|.|.+|++.|.....|..|++
T Consensus         7 ~~~~~~~~h~~~-----------h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~   75 (98)
T 2gqj_A            7 GPGGPEEQWQRA-----------IHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTM   75 (98)
T ss_dssp             CCCCSCSHHHHT-----------TTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHH
T ss_pred             CCCCcHHHHHHH-----------hccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHH
Confidence            444556666666           88999999999999999 99999999999998 999999999999999999999999


Q ss_pred             hhcCCCCCC
Q psy1798         345 LKHNMPFIP  353 (353)
Q Consensus       345 ~~h~~~~~~  353 (353)
                      +||+++|++
T Consensus        76 ~h~~~kp~~   84 (98)
T 2gqj_A           76 AEHSAKPSD   84 (98)
T ss_dssp             HHSCSCSSC
T ss_pred             HHcCCCCCC
Confidence            999999864

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.7e-15  Score=110.57  Aligned_cols=88  Identities=27%  Similarity=0.545  Sum_probs=79.0

Q ss_pred             ccCCCCceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhcccccccccccccccCccccccc
Q psy1798           7 NDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHC   86 (353)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~c~~c   86 (353)
                      ..+.++++|.| .|++.|.+...|..|++.|.+.++|.|+.|++.|.....|..|++.     +..+.+           
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-----h~~~~~-----------   65 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI-----HTGIKP-----------   65 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT-----TCCCCC-----------
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHH-----cCCCCC-----------
Confidence            34667899999 9999999999999999999999999999999999999999999987     444434           


Q ss_pred             cCCCcccchhHHHHHHhhcCCCCcCCCceecCCCCccCCCchhHHHHHhhhcC
Q psy1798          87 YGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTG  139 (353)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (353)
                                                  |.|++|++.|.+...|..|++.|..
T Consensus        66 ----------------------------~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           66 ----------------------------YECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             ----------------------------EECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             ----------------------------eeCCCCcchhcCHHHHHHHHHHccc
Confidence                                        9999999999999999999998753

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.4e-15  Score=103.17  Aligned_cols=64  Identities=33%  Similarity=0.532  Sum_probs=61.7

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      +.++++|+|.+|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|++++||+
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~   76 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS   76 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            6678899999999999999999999999999999999999999999999999999999999985

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.58  E-value=1.1e-15  Score=97.04  Aligned_cols=55  Identities=25%  Similarity=0.460  Sum_probs=52.7

Q ss_pred             CCceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhcc
Q psy1798          11 NVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVG   65 (353)
Q Consensus        11 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~   65 (353)
                      +++||+|.+||+.|.....|..|+++|++++||.|++|++.|.....|..|+++|
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~H   55 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVH   55 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGG
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCcc
Confidence            4689999999999999999999999999999999999999999999999999983

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=3.2e-15  Score=99.93  Aligned_cols=62  Identities=31%  Similarity=0.501  Sum_probs=59.7

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPF  351 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  351 (353)
                      |+++++|+|.+|++.|.+...|..|+++|.+++||.|++|++.|.+...|..|+++|++.++
T Consensus         9 H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            9 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             cCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            88899999999999999999999999999999999999999999999999999999998764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=1.6e-15  Score=107.15  Aligned_cols=63  Identities=17%  Similarity=0.399  Sum_probs=58.9

Q ss_pred             CCCcceeeCCCCCCcc-CCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHH-HhhhcCCCCCC
Q psy1798         290 RRNVIMYRCFVCPYLS-RHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFH-MKLKHNMPFIP  353 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~~~~~~  353 (353)
                      +..+++|.|.+|++.| .+...|..|+++| ++++|.|.+|++.|.....|..| +++|+++++||
T Consensus        29 ~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~   93 (96)
T 2ctd_A           29 IVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGP   93 (96)
T ss_dssp             HHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCS
T ss_pred             hcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCC
Confidence            5677899999999999 9999999999999 99999999999999999999999 88888877776

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.55  E-value=3.2e-15  Score=95.03  Aligned_cols=56  Identities=36%  Similarity=0.768  Sum_probs=51.4

Q ss_pred             cceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcC
Q psy1798         293 VIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      +++|+|.+|++.|.+...|..|+++|++++||.|++|++.|.....|..|+++||+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999999999999999999999999985

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.55  E-value=3.3e-15  Score=103.48  Aligned_cols=78  Identities=22%  Similarity=0.437  Sum_probs=71.0

Q ss_pred             CcCC--CCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCcceeeCCC--CCCccCCcc
Q psy1798         234 PFPC--DMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFV--CPYLSRHKG  309 (353)
Q Consensus       234 ~~~C--~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~  309 (353)
                      ||.|  +.|++.|.....|..|+..                                 |.++++|+|.+  |++.|.+..
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~---------------------------------h~~~~~~~C~~~~C~~~f~~~~   47 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFS---------------------------------HTQQLPYECPHEGCDKRFSLPS   47 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHH---------------------------------HHTTCCEECCSTTCCCEESSHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHH---------------------------------hCCCCCeeCCCCCCcCccCCHH
Confidence            6889  8899999999999888631                                 66778999998  999999999


Q ss_pred             hHHHHHHHhcCCCCccCCC---CcccccCchHHHHHHhhhc
Q psy1798         310 DVKKHVRKHTGEKPYECNL---CDYKATQNSSIHFHMKLKH  347 (353)
Q Consensus       310 ~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l~~H~~~~h  347 (353)
                      .|..|+++|++   |.|.+   |++.|.+...|..|+++||
T Consensus        48 ~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           48 RLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             HHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            99999999998   99999   9999999999999999987

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.55  E-value=1e-14  Score=104.30  Aligned_cols=88  Identities=28%  Similarity=0.559  Sum_probs=78.2

Q ss_pred             cCCCCceeecCC--CCCccCchhhhhhHhhhhcCCCCcccC--CCCcccccchhhhhhhhcccccccccccccccCcccc
Q psy1798           8 DRRNVIMYRCFV--CPYLSRHKGDVKKHVRKHTGEKPYECN--LCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSC   83 (353)
Q Consensus         8 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~c   83 (353)
                      .....++|.|.+  |++.|.....|..|++.|.+.++|.|+  .|++.|.....|..|++.     +..+.+        
T Consensus         9 ~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-----h~~~~~--------   75 (100)
T 2ebt_A            9 DLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK-----HTGAKP--------   75 (100)
T ss_dssp             CCCSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHH-----HTSCCS--------
T ss_pred             ccccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHH-----hCCCCC--------
Confidence            334567899997  999999999999999999999999997  699999999999999987     444444        


Q ss_pred             ccccCCCcccchhHHHHHHhhcCCCCcCCCceecCCCCccCCCchhHHHHHhhhcC
Q psy1798          84 VHCYGDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTG  139 (353)
Q Consensus        84 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  139 (353)
                                                     |.|++|++.|.....|..|+++|.+
T Consensus        76 -------------------------------~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           76 -------------------------------FQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             -------------------------------CBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             -------------------------------eECCCCcCccCCHHHHHHHHHHhCC
Confidence                                           9999999999999999999999864

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.54  E-value=9.9e-15  Score=99.85  Aligned_cols=61  Identities=18%  Similarity=0.294  Sum_probs=55.7

Q ss_pred             ccCCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcC
Q psy1798         288 NDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       288 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      ..+...++|.|.+|++.|.+...|..|+++|++++||.|.+|++.|.....|.+|++..|.
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            3366778899999999999999999999999999999999999999999999999866553

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=8.3e-15  Score=99.33  Aligned_cols=70  Identities=21%  Similarity=0.450  Sum_probs=62.3

Q ss_pred             cccccccccccccchhcccCCCcceeeCCCCCCccCCcchHHHHHH-HhcCC-CCccCCCCcccccCchHHHHHHhhhcC
Q psy1798         271 DLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVR-KHTGE-KPYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       271 ~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      .|..|++.           |+++++|.|.+|++.|.+...|..|++ .|.++ ++|.|++|++.|.+...|..|++++|+
T Consensus         2 s~~~H~~~-----------H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            2 SSGSSGRT-----------HSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCC-----------CSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCCccccc-----------cCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            35567777           999999999999999999999999997 67664 899999999999999999999999887


Q ss_pred             CCC
Q psy1798         349 MPF  351 (353)
Q Consensus       349 ~~~  351 (353)
                      ...
T Consensus        71 ~~~   73 (77)
T 2ct1_A           71 YSG   73 (77)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            653

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.1e-14  Score=101.08  Aligned_cols=72  Identities=14%  Similarity=0.189  Sum_probs=65.3

Q ss_pred             cccccccccccccchhcccCCCcceeeCCCCCCccCCcchHHHHHHHhcCC----CCccCCCCcccccCchHHHHHHhhh
Q psy1798         271 DLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGE----KPYECNLCDYKATQNSSIHFHMKLK  346 (353)
Q Consensus       271 ~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~~  346 (353)
                      .|..|++.           |+++++|.|.+|++.|.+...|..|+++|+..    ++|.|.+|++.|.....|..|+++|
T Consensus         2 s~~~H~~~-----------H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h   70 (86)
T 1x6h_A            2 SSGSSGRT-----------HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNC   70 (86)
T ss_dssp             TTTCCSTT-----------CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHC
T ss_pred             Ccccccce-----------ecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHc
Confidence            35567666           89999999999999999999999999987765    7899999999999999999999999


Q ss_pred             cCCCCCC
Q psy1798         347 HNMPFIP  353 (353)
Q Consensus       347 h~~~~~~  353 (353)
                      ++.++++
T Consensus        71 ~~~~~~~   77 (86)
T 1x6h_A           71 AGPDGVE   77 (86)
T ss_dssp             CCCCSCC
T ss_pred             cCCCCcc
Confidence            9998874

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.1e-14  Score=99.22  Aligned_cols=73  Identities=21%  Similarity=0.477  Sum_probs=62.5

Q ss_pred             hCCCCcCCCC--CCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCcceeeCCC--CCCcc
Q psy1798         230 TGRRPFPCDM--CEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFV--CPYLS  305 (353)
Q Consensus       230 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f  305 (353)
                      .++++|.|..  |++.|.....|..|+..                                .|.++++|+|.+  |++.|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~--------------------------------~H~~~~~~~C~~~~C~k~f   50 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKY--------------------------------QHIHQKSFSCPEPACGKSF   50 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHH--------------------------------GGGSCCCEECSCTTTCCEE
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHH--------------------------------HhCCCCCeECCCCCCcCcc
Confidence            4677888886  99999999999998631                                166778899998  99999


Q ss_pred             CCcchHHHHHHHhcCCCCccCCCCccccc
Q psy1798         306 RHKGDVKKHVRKHTGEKPYECNLCDYKAT  334 (353)
Q Consensus       306 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  334 (353)
                      .+...|..|+++|++++||.|.+|++.|.
T Consensus        51 ~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           51 NFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            99999999999999999999999999883

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.52  E-value=9.9e-15  Score=101.99  Aligned_cols=83  Identities=28%  Similarity=0.566  Sum_probs=75.3

Q ss_pred             CceeecCC--CCCccCchhhhhhHhhhhcCCCCcccC--CCCcccccchhhhhhhhcccccccccccccccCcccccccc
Q psy1798          12 VIMYRCFV--CPYLSRHKGDVKKHVRKHTGEKPYECN--LCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCY   87 (353)
Q Consensus        12 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~c~~c~   87 (353)
                      ..+|.|..  |++.|.....|..|++.|.+.++|.|+  .|++.|.....|..|++.     +.++.+            
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-----h~~~~~------------   65 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK-----HTGHRP------------   65 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHH-----HHCCCC------------
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHH-----cCCCCC------------
Confidence            46799999  999999999999999999999999997  599999999999999987     444444            


Q ss_pred             CCCcccchhHHHHHHhhcCCCCcCCCceecCCCCccCCCchhHHHHHhhhc
Q psy1798          88 GDLSSATETELLDHCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHT  138 (353)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  138 (353)
                                                 |.|++|++.|.+...|..|+++|.
T Consensus        66 ---------------------------~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           66 ---------------------------FQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             ---------------------------EECSSSSCEESSHHHHHHHGGGGC
T ss_pred             ---------------------------ccCCCCCcccCCHHHHHHHHHhhC
Confidence                                       999999999999999999999873

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=7.3e-15  Score=96.38  Aligned_cols=60  Identities=27%  Similarity=0.548  Sum_probs=56.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHH-h-cCCCCccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRK-H-TGEKPYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      |+++++|.|.+|++.|.+...|..|+++ | .+++||.|++|++.|.+...|..|++++|++
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~i   66 (66)
T 2drp_A            5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI   66 (66)
T ss_dssp             EEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC-
T ss_pred             cCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcCC
Confidence            7788999999999999999999999998 7 5889999999999999999999999999985

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.52  E-value=1.2e-14  Score=92.38  Aligned_cols=56  Identities=30%  Similarity=0.641  Sum_probs=54.1

Q ss_pred             eeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCC
Q psy1798         295 MYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMP  350 (353)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  350 (353)
                      ||.|.+|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++|++.+
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            58999999999999999999999999999999999999999999999999999875

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=7.9e-15  Score=104.08  Aligned_cols=65  Identities=17%  Similarity=0.357  Sum_probs=60.1

Q ss_pred             cCCCcceeeCCCCCCccCCcchHHHHHH-Hh---cCCCCccCCCCcccccCchHHHHH-HhhhcCCCCCC
Q psy1798         289 DRRNVIMYRCFVCPYLSRHKGDVKKHVR-KH---TGEKPYECNLCDYKATQNSSIHFH-MKLKHNMPFIP  353 (353)
Q Consensus       289 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~~~~~~  353 (353)
                      ..++++||.|.+|++.|.++..|..|++ +|   .+++||.|.+||+.|.+...|..| +++|++++||+
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~   81 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFK   81 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEE
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCee
Confidence            3678899999999999999999999998 58   568999999999999999999999 89999999984

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.50  E-value=8.4e-15  Score=102.11  Aligned_cols=81  Identities=26%  Similarity=0.411  Sum_probs=70.2

Q ss_pred             CceecCCCCccCCCchhHHHHHhhhcCCCCccCCCCCccccChHHHHHHHHHhcCCccccCcccCccccccccccchHHH
Q psy1798         113 GWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFL  192 (353)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~c~~c~~~~~~~~~~~l  192 (353)
                      ++|.|++|++.|.+...|..|+++|.++++|.|+.|++.|.....|..|+...|                          
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~--------------------------   55 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH--------------------------   55 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHT--------------------------
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhC--------------------------
Confidence            579999999999999999999999999999999999999999999999954444                          


Q ss_pred             HHhhhcCCCCCCcccccccchhhccCHHHHHHHHHhhh
Q psy1798         193 LKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHT  230 (353)
Q Consensus       193 ~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  230 (353)
                                 ..+|.|..|++.|.+...|..|++.+.
T Consensus        56 -----------~~~~~c~~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C           56 -----------ILPILEDKVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             -----------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCcchHHHHHHHHHHHhhhHHHHHHHH
Confidence                       245788889999988999999987543

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.49  E-value=1.5e-15  Score=114.25  Aligned_cols=59  Identities=24%  Similarity=0.391  Sum_probs=56.2

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMP  350 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  350 (353)
                      |++++||.|.+|++.|.....|..|+++|  ++||.|++|++.|.+...|..|+++||+.-
T Consensus        69 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           69 SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             HHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             hCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            67789999999999999999999999999  899999999999999999999999999874

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.48  E-value=4.6e-14  Score=97.61  Aligned_cols=78  Identities=22%  Similarity=0.418  Sum_probs=70.6

Q ss_pred             cccc--ccchhhccCHHHHHHHHHhhhCCCCcCCCC--CCccccchhHHHHhhhhccccCCCCcCCCCcccccccccccc
Q psy1798         206 GFQC--YLCLYITRQSAHMRQHLRKHTGRRPFPCDM--CEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSV  281 (353)
Q Consensus       206 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~  281 (353)
                      +|+|  +.|++.|.+...|..|++.|.++++|.|+.  |++.|.....|..|+..                         
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-------------------------   55 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV-------------------------   55 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHH-------------------------
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHH-------------------------
Confidence            5889  899999999999999999999999999988  99999999999999731                         


Q ss_pred             ccchhcccCCCcceeeCCC---CCCccCCcchHHHHHHHhc
Q psy1798         282 MGIAYLNDRRNVIMYRCFV---CPYLSRHKGDVKKHVRKHT  319 (353)
Q Consensus       282 ~~~~~~~~~~~~~~~~C~~---C~~~f~~~~~l~~H~~~h~  319 (353)
                              |++   |.|..   |++.|.+...|..|+++|+
T Consensus        56 --------h~~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           56 --------HAG---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             --------HHS---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             --------hCC---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence                    333   89999   9999999999999999874

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=4.5e-14  Score=97.90  Aligned_cols=84  Identities=29%  Similarity=0.452  Sum_probs=71.3

Q ss_pred             hhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhcccccccccccccccCccccccccCCCcccchhHHHHHHhhcCCC
Q psy1798          29 DVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSATETELLDHCMQCSRD  108 (353)
Q Consensus        29 ~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~  108 (353)
                      +|..|+++|.+++||.|+.|++.|.....|..|++.++... ..                                    
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~-~~------------------------------------   44 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN-FV------------------------------------   44 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS-CC------------------------------------
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCc-CC------------------------------------
Confidence            56789999999999999999999999999999998744321 00                                    


Q ss_pred             CcCCCceecCCCCccCCCchhHHHHHhhhcCCCCccCCCCCccc
Q psy1798         109 TCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYAS  152 (353)
Q Consensus       109 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  152 (353)
                         ..+|.|++|++.|.....|..|++.|.++.++.|..|+..+
T Consensus        45 ---~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           45 ---PAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             ---CCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             ---CcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence               12499999999999999999999999999999999998765

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=4.2e-14  Score=96.08  Aligned_cols=63  Identities=21%  Similarity=0.453  Sum_probs=56.5

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcC---CCCccCCCCcccccCchHHHHHHhhhcC-CCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTG---EKPYECNLCDYKATQNSSIHFHMKLKHN-MPFI  352 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~h~-~~~~  352 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++   +++|.|.+|++.|.....|..|++.+|. .++.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            7788999999999999999999999999986   8999999999999999999999965554 4443

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=1.3e-13  Score=93.84  Aligned_cols=72  Identities=22%  Similarity=0.433  Sum_probs=55.2

Q ss_pred             CCCCccCCC--CCccccChHHHHHHHHHhcCCccccCcccCccccccccccchHHHHHhhhcCCCCCCccccccc--chh
Q psy1798         139 GHKPYACTE--CGYASILSTDLRKHIERIHMPQFVEDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYL--CLY  214 (353)
Q Consensus       139 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~~~c~~c~~~~~~~~~~~l~~h~~~~~~~~~~~~~C~~--C~~  214 (353)
                      ++++|.|+.  |++.|.....|..|+...|.+                                   .++|.|+.  |++
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-----------------------------------~~~~~C~~~~C~k   48 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH-----------------------------------QKSFSCPEPACGK   48 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGS-----------------------------------CCCEECSCTTTCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCC-----------------------------------CCCeECCCCCCcC
Confidence            455666665  777777777777774435643                                   56678887  888


Q ss_pred             hccCHHHHHHHHHhhhCCCCcCCCCCCcccc
Q psy1798         215 ITRQSAHMRQHLRKHTGRRPFPCDMCEYSAA  245 (353)
Q Consensus       215 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  245 (353)
                      .|.+...|..|+++|.+++||.|+.|++.|.
T Consensus        49 ~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           49 SFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             EESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             ccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            8888888889998999999999999998874

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1e-13  Score=88.95  Aligned_cols=55  Identities=33%  Similarity=0.606  Sum_probs=50.9

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcC
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      +||+|.+|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|++..|.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~   55 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS   55 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence            4799999999999999999999999999999999999999999999999854443

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=1.6e-13  Score=92.86  Aligned_cols=65  Identities=26%  Similarity=0.424  Sum_probs=47.4

Q ss_pred             hhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCcceeeCCCCCCccCCc
Q psy1798         229 HTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHK  308 (353)
Q Consensus       229 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~  308 (353)
                      +.++++|.|+.|++.|.....|..|+..                                 |.++++|+|.+|++.|...
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~---------------------------------h~~~~~~~C~~C~~~f~~~   59 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRT---------------------------------HTGEKPYKCDECGKAFIQR   59 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTT---------------------------------TCCSCSEECSSSCCEESSH
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHH---------------------------------cCCCcCeeCCCCCCccCCH
Confidence            4456777777777777777777777521                                 5566677777777777777


Q ss_pred             chHHHHHHHhcCCCCccC
Q psy1798         309 GDVKKHVRKHTGEKPYEC  326 (353)
Q Consensus       309 ~~l~~H~~~h~~~~~~~C  326 (353)
                      ..|..|+++|++++||.|
T Consensus        60 ~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           60 SHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             HHHHHHGGGSCCCCCCCC
T ss_pred             HHHHHHHHHhCCCCCCCC
Confidence            888888888888888876

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=8.4e-14  Score=98.76  Aligned_cols=71  Identities=15%  Similarity=0.455  Sum_probs=61.5

Q ss_pred             hhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccC---CCcceeeCCCCCCcc
Q psy1798         229 HTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDR---RNVIMYRCFVCPYLS  305 (353)
Q Consensus       229 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~---~~~~~~~C~~C~~~f  305 (353)
                      -.|++||.|+.|++.|...+.|..|+..                                .|   ++++||+|.+||++|
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~--------------------------------~H~~~~~ekpf~C~~Cgk~F   60 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDS--------------------------------EHPNVVLNSSYVCVECNFLT   60 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHH--------------------------------HCSSCCCSCCEEETTTTEEE
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHh--------------------------------hCCCCCCCCCcCCCCCCccc
Confidence            3578999999999999999999999621                                04   457899999999999


Q ss_pred             CCcchHHHH-HHHhcCCCCccCCCCcc
Q psy1798         306 RHKGDVKKH-VRKHTGEKPYECNLCDY  331 (353)
Q Consensus       306 ~~~~~l~~H-~~~h~~~~~~~C~~C~~  331 (353)
                      .....|..| +++|++++||.|.++..
T Consensus        61 ~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           61 KRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             SSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            999999999 89999999999988664

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.37  E-value=2e-13  Score=102.48  Aligned_cols=81  Identities=17%  Similarity=0.237  Sum_probs=67.0

Q ss_pred             cccccccchhhcc------CHHHHHHHHHhhhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccc
Q psy1798         205 VGFQCYLCLYITR------QSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQ  278 (353)
Q Consensus       205 ~~~~C~~C~~~f~------~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~  278 (353)
                      +.+.|+.|...|.      ....|..|+ .|++++||.|+.|++.|.....|..|+..                      
T Consensus        40 ~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~----------------------   96 (129)
T 2wbt_A           40 KRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRY----------------------   96 (129)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHH----------------------
T ss_pred             CcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHH----------------------
Confidence            4456666666655      556677776 68889999999999999999999999731                      


Q ss_pred             cccccchhcccCCCcceeeCCCCCCccCCcchHHHHHHHhcCC
Q psy1798         279 CSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGE  321 (353)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (353)
                                 |  ++||.|.+|++.|.+...|..|+++|+++
T Consensus        97 -----------H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           97 -----------T--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             -----------T--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             -----------C--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence                       4  67899999999999999999999999875

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.37  E-value=4.9e-13  Score=91.36  Aligned_cols=60  Identities=17%  Similarity=0.267  Sum_probs=54.3

Q ss_pred             ccCCCCceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhccc
Q psy1798           7 NDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGV   66 (353)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~   66 (353)
                      ....+.++|.|++|++.|.....|..|+++|++++||.|++|++.|.....|..|++..|
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H   80 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCH   80 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccC
Confidence            344457789999999999999999999999999999999999999999999999986533

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.36  E-value=7.6e-13  Score=88.76  Aligned_cols=63  Identities=35%  Similarity=0.644  Sum_probs=44.4

Q ss_pred             hhCCCCcCCCCCCccccchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCCcceeeCCCCCCccCCc
Q psy1798         229 HTGRRPFPCDMCEYSAAQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHK  308 (353)
Q Consensus       229 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~  308 (353)
                      +.++++|.|+.|++.|.....|..|+..                                 |+++++|+|.+|++.|...
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~---------------------------------H~~~~~~~C~~C~k~f~~~   58 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTV---------------------------------HTGEKPYRCNICGAQFNRP   58 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHH---------------------------------HCCCCSEECTTTCCEESCH
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHH---------------------------------cCCCCCEECCCCCchhCCH
Confidence            4556667777777777777777666521                                 5556667777777777777


Q ss_pred             chHHHHHHHhcCCCCc
Q psy1798         309 GDVKKHVRKHTGEKPY  324 (353)
Q Consensus       309 ~~l~~H~~~h~~~~~~  324 (353)
                      ..|..|+++|++++||
T Consensus        59 ~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           59 ANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             HHHHHHHHHHCCSCCC
T ss_pred             HHHHHHHHhcCCCCCC
Confidence            7788888888887775

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=4.8e-13  Score=89.50  Aligned_cols=58  Identities=22%  Similarity=0.581  Sum_probs=55.0

Q ss_pred             CCCcceeeCC--CCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhc
Q psy1798         290 RRNVIMYRCF--VCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKH  347 (353)
Q Consensus       290 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  347 (353)
                      +.++++|.|.  .|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|+
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            7788999997  699999999999999999999999999999999999999999999874

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=6.2e-13  Score=86.99  Aligned_cols=61  Identities=15%  Similarity=0.236  Sum_probs=56.8

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCC-CCcccccCchHHHHHHhhhcCCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN-LCDYKATQNSSIHFHMKLKHNMPFI  352 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~~h~~~~~  352 (353)
                      .-+.+||+|..|++.|. ...|..|+++ .+++||.|+ .||+.|.....|..|+++|-..+|+
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~i   66 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALV   66 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCcC
Confidence            45678999999999999 9999999999 999999999 9999999999999999999887764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.35  E-value=4.2e-13  Score=85.04  Aligned_cols=56  Identities=34%  Similarity=0.707  Sum_probs=50.2

Q ss_pred             CCceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhccc
Q psy1798          11 NVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGV   66 (353)
Q Consensus        11 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~   66 (353)
                      ++++|+|.+|++.|.....|..|+++|++++||.|+.|++.|.....|..|++.+|
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            35789999999999999999999999999999999999999999999999998754

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=8.7e-13  Score=93.03  Aligned_cols=78  Identities=18%  Similarity=0.234  Sum_probs=65.1

Q ss_pred             hhccCHHHHHHHHHhhhCCCCcCCCCCCccc-cchhHHHHhhhhccccCCCCcCCCCccccccccccccccchhcccCCC
Q psy1798         214 YITRQSAHMRQHLRKHTGRRPFPCDMCEYSA-AQKWNLKMHMHFLCHHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRN  292 (353)
Q Consensus       214 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~~C~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~  292 (353)
                      ..|.....|..|++.|.++++|.|+.|++.| .....|..|+..                                 | +
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~---------------------------------h-~   59 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMEN---------------------------------C-K   59 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHH---------------------------------H-C
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHH---------------------------------H-C
Confidence            3455667788899999999999999999999 899999999732                                 6 7


Q ss_pred             cceeeCCCCCCccCCcchHHHH-HHHhcCCCCcc
Q psy1798         293 VIMYRCFVCPYLSRHKGDVKKH-VRKHTGEKPYE  325 (353)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~  325 (353)
                      +++|.|.+|++.|.....|..| +++|+++..+.
T Consensus        60 ~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~   93 (96)
T 2ctd_A           60 QEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGP   93 (96)
T ss_dssp             CCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCS
T ss_pred             CCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCC
Confidence            7889999999999999999999 88887644333

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=1.1e-12  Score=93.13  Aligned_cols=78  Identities=19%  Similarity=0.299  Sum_probs=59.7

Q ss_pred             ccCchhhhhhHhhhhcCCCCcccCCCCcccc-cchhhhhhhhccccccccc-ccccccCccccccccCCCcccchhHHHH
Q psy1798          23 LSRHKGDVKKHVRKHTGEKPYECNLCDYKAT-QNSSIHFHMKVGVQAIFTS-ENVVLSGLHSCVHCYGDLSSATETELLD  100 (353)
Q Consensus        23 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~-~~~~l~~H~~~~~~~~~~~-~~~~~~~~~~c~~c~~~~~~~~~~~~~~  100 (353)
                      .+.....+..|+++|.++++|.|++|++.|. ....|..|++.|     .. +.+                         
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h-----~~~~~~-------------------------   54 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVC-----QKLQDA-------------------------   54 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHH-----HHHHHH-------------------------
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHH-----cCCCCC-------------------------
Confidence            3455666778888888888888888888888 888888888763     32 223                         


Q ss_pred             HHhhcCCCCcCCCceecCCCCccCCCchhHHHHHhhhcCCCCcc
Q psy1798         101 HCMQCSRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYA  144 (353)
Q Consensus       101 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  144 (353)
                                    |.|++|++.|.....|..|++.|++++++.
T Consensus        55 --------------~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A           55 --------------LKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             --------------HSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             --------------EECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence                          788888888888888888888888777643

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.29  E-value=3.7e-12  Score=89.90  Aligned_cols=61  Identities=15%  Similarity=0.129  Sum_probs=56.7

Q ss_pred             cceeeCCCCCCccCCcchHHHHHHH-hcCCCC--------ccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         293 VIMYRCFVCPYLSRHKGDVKKHVRK-HTGEKP--------YECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      ...|.|.+|++.|.+...|..|+++ |.++++        |.|.+|++.|.+...|..|+++|++++||.
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   92 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGP   92 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCS
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            3457899999999999999999998 888887        999999999999999999999999999985

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=2.7e-12  Score=85.01  Aligned_cols=60  Identities=27%  Similarity=0.523  Sum_probs=55.6

Q ss_pred             cCCCCceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhcccc
Q psy1798           8 DRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQ   67 (353)
Q Consensus         8 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~   67 (353)
                      .+.++++|+|.+|++.|.....|..|+++|.++++|.|++|++.|.....|..|++.++.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   62 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG   62 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhC
Confidence            356689999999999999999999999999999999999999999999999999998543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=4.4e-12  Score=81.14  Aligned_cols=57  Identities=32%  Similarity=0.526  Sum_probs=53.1

Q ss_pred             CceecCCCCccCCCchhHHHHHhhhcCCCCccCCCCCccccChHHHHHHHHHhcCCc
Q psy1798         113 GWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGYASILSTDLRKHIERIHMPQ  169 (353)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  169 (353)
                      ++|.|++|++.|.+...|..|++.|.++++|.|+.|++.|.....|..|+.+.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            369999999999999999999999999999999999999999999999977888763

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=2.9e-12  Score=85.37  Aligned_cols=60  Identities=30%  Similarity=0.479  Sum_probs=55.6

Q ss_pred             ccCCCCceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhccc
Q psy1798           7 NDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGV   66 (353)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~   66 (353)
                      ..+.+.++|+|.+|++.|.....|..|++.|.+++||.|++|++.|.....|..|++.|+
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~   66 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT   66 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcC
Confidence            345678999999999999999999999999999999999999999999999999998843

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.27  E-value=3.9e-12  Score=80.46  Aligned_cols=54  Identities=30%  Similarity=0.663  Sum_probs=51.0

Q ss_pred             eeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhcccc
Q psy1798          14 MYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQ   67 (353)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~   67 (353)
                      +|.|..|++.|.....|..|+++|.+++||.|+.|++.|.....|..|++.++.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            589999999999999999999999999999999999999999999999988543

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.25  E-value=5.8e-12  Score=83.87  Aligned_cols=57  Identities=25%  Similarity=0.517  Sum_probs=53.3

Q ss_pred             CCCcceeeCCC--CCCccCCcchHHHHHHHhcCCCCccCCC--CcccccCchHHHHHHhhh
Q psy1798         290 RRNVIMYRCFV--CPYLSRHKGDVKKHVRKHTGEKPYECNL--CDYKATQNSSIHFHMKLK  346 (353)
Q Consensus       290 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~  346 (353)
                      ....++|.|..  |++.|.....|..|+++|++++||.|.+  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            66778899998  9999999999999999999999999976  999999999999999875

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=1.8e-13  Score=91.54  Aligned_cols=68  Identities=10%  Similarity=0.141  Sum_probs=61.8

Q ss_pred             CCccccccccccccccchhcccCCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhc
Q psy1798         268 DIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKH  347 (353)
Q Consensus       268 ~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  347 (353)
                      ..+.|..|++.           |.++++|.|.+|++.|.....|..       +++|.|++|++.|.+...|..|+++|+
T Consensus         2 ~~~~l~~H~~~-----------h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~   63 (73)
T 2ctu_A            2 SSGSSGKRQKI-----------HLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNES   63 (73)
T ss_dssp             CCCSCCCCCCC-----------CCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCC
T ss_pred             cchhHHHHHHH-----------hCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhc
Confidence            34577888877           999999999999999999998887       789999999999999999999999999


Q ss_pred             CCCCCC
Q psy1798         348 NMPFIP  353 (353)
Q Consensus       348 ~~~~~~  353 (353)
                      +++||.
T Consensus        64 ~~~~~~   69 (73)
T 2ctu_A           64 GKKTSG   69 (73)
T ss_dssp             CCCCSS
T ss_pred             CCCCCC
Confidence            999984

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=1.1e-13  Score=92.58  Aligned_cols=72  Identities=17%  Similarity=0.301  Sum_probs=62.9

Q ss_pred             chhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhcccccccccccccccCccccccccCCCcccchhHHHHHHhhc
Q psy1798          26 HKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVGVQAIFTSENVVLSGLHSCVHCYGDLSSATETELLDHCMQC  105 (353)
Q Consensus        26 ~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~  105 (353)
                      +...|..|+++|.+++||.|++|++.|.....|..            +                                
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~------------~--------------------------------   37 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR------------R--------------------------------   37 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC------------S--------------------------------
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc------------C--------------------------------
Confidence            35678899999999999999999999998888754            1                                


Q ss_pred             CCCCcCCCceecCCCCccCCCchhHHHHHhhhcCCCCccCCCC
Q psy1798         106 SRDTCIPGWFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTEC  148 (353)
Q Consensus       106 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  148 (353)
                             ++|.|++|++.|.....|..|+++|.++++|.|++|
T Consensus        38 -------~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           38 -------KTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             -------SSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             -------CCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence                   138999999999999999999999999999999987

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=8e-12  Score=84.62  Aligned_cols=61  Identities=21%  Similarity=0.451  Sum_probs=55.2

Q ss_pred             CCCCceeecCCCCCccCchhhhhhHhhhhcC---CCCcccCCCCcccccchhhhhhhhcccccc
Q psy1798           9 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTG---EKPYECNLCDYKATQNSSIHFHMKVGVQAI   69 (353)
Q Consensus         9 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~   69 (353)
                      +.++++|+|.+|++.|.....|..|+++|.+   +++|.|++|++.|.....|..|++.+|...
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            4578999999999999999999999999986   899999999999999999999997755543

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.21  E-value=1e-11  Score=77.44  Aligned_cols=47  Identities=19%  Similarity=0.327  Sum_probs=44.2

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHH-HhcCCCCccCCCCcccccCc
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVR-KHTGEKPYECNLCDYKATQN  336 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~  336 (353)
                      +.++++|.|.+|++.|.....|..|++ +|.+++||.|.+|++.|.++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~~   54 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG   54 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCCC
Confidence            778899999999999999999999997 99999999999999999863

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=4.7e-12  Score=82.75  Aligned_cols=59  Identities=25%  Similarity=0.490  Sum_probs=53.3

Q ss_pred             CCCCceeecCCCCCccCchhhhhhHhhh-h-cCCCCcccCCCCcccccchhhhhhhhcccc
Q psy1798           9 RRNVIMYRCFVCPYLSRHKGDVKKHVRK-H-TGEKPYECNLCDYKATQNSSIHFHMKVGVQ   67 (353)
Q Consensus         9 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~   67 (353)
                      +.++++|.|..|++.|.....|..|++. | .+++||.|+.|++.|.....|..|++.+|.
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            3457899999999999999999999998 6 588999999999999999999999987553

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.17  E-value=3.1e-11  Score=72.49  Aligned_cols=40  Identities=23%  Similarity=0.335  Sum_probs=38.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            7 GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999987

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.17  E-value=6.4e-12  Score=78.42  Aligned_cols=52  Identities=19%  Similarity=0.309  Sum_probs=46.9

Q ss_pred             CCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         302 PYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       302 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      ++.|.....|..|+++|.++++|.|.+||+.|.....|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            3567888888999999999999999999999999999999999999999984

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3e-11  Score=72.54  Aligned_cols=40  Identities=28%  Similarity=0.350  Sum_probs=38.4

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            7 GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.16  E-value=3.1e-11  Score=72.49  Aligned_cols=40  Identities=28%  Similarity=0.340  Sum_probs=38.2

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            7 GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             cCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=3e-11  Score=72.56  Aligned_cols=40  Identities=25%  Similarity=0.260  Sum_probs=38.4

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            7 GTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             cCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999988

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=3.2e-11  Score=81.36  Aligned_cols=55  Identities=22%  Similarity=0.454  Sum_probs=48.2

Q ss_pred             ceecCCCCccCCCchhHHHHHh-hhcCC-CCccCCCCCccccChHHHHHHHHHhcCC
Q psy1798         114 WFQCFRCRYSNKFRSNFLRHIR-THTGH-KPYACTECGYASILSTDLRKHIERIHMP  168 (353)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~H~~  168 (353)
                      +|.|++|++.|.....|..|++ .|.++ ++|.|+.|++.|.....|..|+...|..
T Consensus        15 ~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A           15 PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             SEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            3999999999999999999997 57764 7899999999999999999997777765

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.9e-11  Score=72.63  Aligned_cols=40  Identities=28%  Similarity=0.285  Sum_probs=38.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            7 GTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.8e-11  Score=72.11  Aligned_cols=40  Identities=23%  Similarity=0.272  Sum_probs=38.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            7 GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=3.4e-11  Score=71.55  Aligned_cols=40  Identities=20%  Similarity=0.227  Sum_probs=38.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             cCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.3e-11  Score=72.36  Aligned_cols=40  Identities=18%  Similarity=0.201  Sum_probs=38.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|.|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            7 GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            8889999999999999999999999999999999999987

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.2e-11  Score=72.44  Aligned_cols=40  Identities=28%  Similarity=0.412  Sum_probs=38.0

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            7 GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             cCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            8889999999999999999999999999999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.9e-11  Score=72.04  Aligned_cols=40  Identities=20%  Similarity=0.286  Sum_probs=38.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            7 GTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.2e-11  Score=71.92  Aligned_cols=40  Identities=23%  Similarity=0.327  Sum_probs=38.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            7 GSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             cCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999988

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.8e-11  Score=72.09  Aligned_cols=40  Identities=28%  Similarity=0.404  Sum_probs=38.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            7 GSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.1e-11  Score=72.47  Aligned_cols=40  Identities=25%  Similarity=0.388  Sum_probs=38.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            7 GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.8e-11  Score=72.12  Aligned_cols=40  Identities=30%  Similarity=0.404  Sum_probs=38.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            7 GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.5e-11  Score=72.26  Aligned_cols=40  Identities=28%  Similarity=0.331  Sum_probs=38.0

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            7 GTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.1e-11  Score=72.52  Aligned_cols=40  Identities=25%  Similarity=0.375  Sum_probs=37.7

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            7 GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.14  E-value=3e-11  Score=72.54  Aligned_cols=40  Identities=20%  Similarity=0.315  Sum_probs=37.6

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            7 GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            8888999999999999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.6e-11  Score=71.71  Aligned_cols=40  Identities=18%  Similarity=0.145  Sum_probs=38.2

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            7 GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.13  E-value=3.9e-11  Score=72.02  Aligned_cols=40  Identities=25%  Similarity=0.408  Sum_probs=37.9

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            7 GTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4e-11  Score=71.98  Aligned_cols=40  Identities=23%  Similarity=0.386  Sum_probs=38.2

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            7 GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=3.2e-11  Score=72.44  Aligned_cols=40  Identities=28%  Similarity=0.331  Sum_probs=38.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|.|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            7 GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.9e-11  Score=71.61  Aligned_cols=40  Identities=23%  Similarity=0.261  Sum_probs=37.7

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|.|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            7 GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             TSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.3e-11  Score=72.36  Aligned_cols=40  Identities=33%  Similarity=0.483  Sum_probs=38.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            7 GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.5e-11  Score=72.26  Aligned_cols=40  Identities=28%  Similarity=0.428  Sum_probs=38.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            7 GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.7e-11  Score=72.12  Aligned_cols=40  Identities=25%  Similarity=0.323  Sum_probs=37.8

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            7 GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.7e-11  Score=72.14  Aligned_cols=40  Identities=23%  Similarity=0.213  Sum_probs=37.8

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            7 GTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             cCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3e-11  Score=72.56  Aligned_cols=40  Identities=25%  Similarity=0.364  Sum_probs=37.8

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|++|
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            7 GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.13  E-value=3.1e-11  Score=72.52  Aligned_cols=40  Identities=30%  Similarity=0.355  Sum_probs=37.7

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            7 GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.3e-11  Score=71.86  Aligned_cols=40  Identities=30%  Similarity=0.350  Sum_probs=38.4

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            7 GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             cCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4e-11  Score=72.01  Aligned_cols=40  Identities=23%  Similarity=0.223  Sum_probs=37.8

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            7 GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=6e-11  Score=71.19  Aligned_cols=40  Identities=15%  Similarity=0.069  Sum_probs=38.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            7 GSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             SSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=3.6e-11  Score=72.18  Aligned_cols=40  Identities=28%  Similarity=0.278  Sum_probs=37.9

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            7 GTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.8e-11  Score=71.63  Aligned_cols=40  Identities=28%  Similarity=0.382  Sum_probs=37.9

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|.|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            7 GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.8e-11  Score=71.65  Aligned_cols=40  Identities=28%  Similarity=0.327  Sum_probs=37.9

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|.|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            7 GSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.5e-11  Score=72.24  Aligned_cols=40  Identities=25%  Similarity=0.329  Sum_probs=37.7

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            7 GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=5.3e-11  Score=71.43  Aligned_cols=40  Identities=23%  Similarity=0.282  Sum_probs=38.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            7 GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999988

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=4.2e-11  Score=79.85  Aligned_cols=59  Identities=22%  Similarity=0.545  Sum_probs=53.9

Q ss_pred             ccCCCCceeecC--CCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhcc
Q psy1798           7 NDRRNVIMYRCF--VCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKVG   65 (353)
Q Consensus         7 ~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~~   65 (353)
                      ..+.+.++|.|+  .|++.|.....|..|++.|.++++|.|+.|++.|.....|..|++.|
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            345567899997  59999999999999999999999999999999999999999999863

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.8e-11  Score=72.08  Aligned_cols=40  Identities=28%  Similarity=0.395  Sum_probs=37.5

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            7 GTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=6.1e-11  Score=71.16  Aligned_cols=40  Identities=28%  Similarity=0.317  Sum_probs=38.5

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            7 GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            8889999999999999999999999999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.4e-11  Score=71.82  Aligned_cols=40  Identities=28%  Similarity=0.332  Sum_probs=37.7

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            7 GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             cCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=4.6e-11  Score=71.72  Aligned_cols=40  Identities=20%  Similarity=0.075  Sum_probs=38.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            7 GSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.11  E-value=5.1e-11  Score=71.52  Aligned_cols=40  Identities=30%  Similarity=0.287  Sum_probs=38.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            7 GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8889999999999999999999999999999999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.3e-11  Score=72.35  Aligned_cols=40  Identities=25%  Similarity=0.347  Sum_probs=38.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            7 GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999988

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.10  E-value=5.2e-11  Score=71.50  Aligned_cols=40  Identities=30%  Similarity=0.340  Sum_probs=37.8

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|.|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            7 GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.09  E-value=3.4e-11  Score=73.02  Aligned_cols=42  Identities=26%  Similarity=0.434  Sum_probs=40.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcc
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDY  331 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  331 (353)
                      +..+++|.|.+|++.|.+...|..|+++|++++||.|.+|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            778899999999999999999999999999999999999986

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.2e-11  Score=71.90  Aligned_cols=40  Identities=25%  Similarity=0.313  Sum_probs=38.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            7 GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.1e-11  Score=71.53  Aligned_cols=40  Identities=25%  Similarity=0.357  Sum_probs=37.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            7 GSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999887

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7.2e-11  Score=70.84  Aligned_cols=40  Identities=28%  Similarity=0.385  Sum_probs=36.7

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            7 GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999875

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=1.2e-10  Score=69.87  Aligned_cols=40  Identities=28%  Similarity=0.382  Sum_probs=37.6

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            7 GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999875

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.07  E-value=7.3e-11  Score=70.44  Aligned_cols=41  Identities=24%  Similarity=0.327  Sum_probs=39.6

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCc
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCD  330 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  330 (353)
                      |+++++|+|.+|++.|.....|..|+++|+++++|.|++||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            88889999999999999999999999999999999999997

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=1e-10  Score=70.52  Aligned_cols=40  Identities=28%  Similarity=0.364  Sum_probs=37.8

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHH-HhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVR-KHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.+...|..|++ +|.+++||.|++|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            7 GTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            888899999999999999999999999 9999999999987

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.05  E-value=3.4e-11  Score=77.40  Aligned_cols=48  Identities=15%  Similarity=0.318  Sum_probs=43.7

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHH
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIH  340 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  340 (353)
                      |++++||+|.+|++.|.....|.   ++|.+++||.|++||+.|....++.
T Consensus         9 H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            9 STNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             cCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            89999999999999999988876   8999999999999999998877654

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1.2e-10  Score=75.90  Aligned_cols=55  Identities=15%  Similarity=0.227  Sum_probs=50.8

Q ss_pred             CCCceeecCCCCCccCchhhhhhHhhhhcCCCCcccC-CCCcccccchhhhhhhhccc
Q psy1798          10 RNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN-LCDYKATQNSSIHFHMKVGV   66 (353)
Q Consensus        10 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~~~~~~~l~~H~~~~~   66 (353)
                      =+.++|.|..|++.|. ...|..|+++ .+++||.|+ .|++.|.....|..|++.|.
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc   61 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSC   61 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTS
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhc
Confidence            3578999999999999 9999999999 999999999 99999999999999998743

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.02  E-value=2.6e-10  Score=68.33  Aligned_cols=39  Identities=26%  Similarity=0.331  Sum_probs=35.4

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            7 GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            888899999999999999999999999999999999874

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=2.9e-10  Score=68.13  Aligned_cols=39  Identities=31%  Similarity=0.430  Sum_probs=35.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            7 GTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             cCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            888899999999999999999999999999999999864

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=2.1e-10  Score=68.73  Aligned_cols=40  Identities=33%  Similarity=0.394  Sum_probs=38.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            8888999999999999999999999999999999999987

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.00  E-value=3e-10  Score=75.40  Aligned_cols=58  Identities=26%  Similarity=0.523  Sum_probs=52.8

Q ss_pred             ccCCCCceeecCC--CCCccCchhhhhhHhhhhcCCCCcccCC--CCcccccchhhhhhhhc
Q psy1798           7 NDRRNVIMYRCFV--CPYLSRHKGDVKKHVRKHTGEKPYECNL--CDYKATQNSSIHFHMKV   64 (353)
Q Consensus         7 ~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~~~~~~~l~~H~~~   64 (353)
                      ......++|.|..  |++.|.....|..|+++|.+++||.|++  |++.|.....|..|++.
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            3455678899998  9999999999999999999999999975  99999999999999875

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=4e-10  Score=67.51  Aligned_cols=39  Identities=26%  Similarity=0.393  Sum_probs=35.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|.|.+|++.|.+...|..|+++|++++||.|++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            7 GTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            888899999999999999999999999999999999864

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.4e-10  Score=69.53  Aligned_cols=40  Identities=23%  Similarity=0.202  Sum_probs=38.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|.|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            7 GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7888999999999999999999999999999999999987

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.4e-10  Score=77.43  Aligned_cols=69  Identities=13%  Similarity=0.138  Sum_probs=61.2

Q ss_pred             CccccccccccccccchhcccCCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcC
Q psy1798         269 IGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       269 ~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      +..|..|+..           +.+.+++.|..|+..|. ...|..|+ .|.+++||.|+.|++.|. ...|..|+.++.+
T Consensus         2 ~~~L~~H~~~-----------~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~   67 (75)
T 2d9k_A            2 SSGSSGHEET-----------ECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGR   67 (75)
T ss_dssp             CCCCSCCCCC-----------CCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTT
T ss_pred             chHHHhhCcc-----------cCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccC
Confidence            4567778777           89999999999999995 89999999 899999999999999877 6999999999887


Q ss_pred             CCC
Q psy1798         349 MPF  351 (353)
Q Consensus       349 ~~~  351 (353)
                      .+.
T Consensus        68 ~~~   70 (75)
T 2d9k_A           68 EGS   70 (75)
T ss_dssp             BSS
T ss_pred             CcC
Confidence            653

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=3.7e-10  Score=67.64  Aligned_cols=39  Identities=31%  Similarity=0.481  Sum_probs=35.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|.|.+|++.|.+...|..|+++|++++||.|++
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            7 GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            788889999999999999999999999999999999864

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=4.6e-10  Score=67.23  Aligned_cols=39  Identities=26%  Similarity=0.416  Sum_probs=35.2

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            7 GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            788889999999999999999999999999999999864

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=1e-10  Score=68.63  Aligned_cols=38  Identities=16%  Similarity=0.209  Sum_probs=28.7

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN  327 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (353)
                      |++++||+|.+|++.|.+...|..|+++|++++||.|+
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            66777777777777777777777777777777777764

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.99  E-value=9e-11  Score=68.88  Aligned_cols=38  Identities=24%  Similarity=0.342  Sum_probs=27.2

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN  327 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|+
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            66667777777777777777777777777777777663

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.6e-10  Score=67.69  Aligned_cols=39  Identities=28%  Similarity=0.346  Sum_probs=33.7

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            7 GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            778888888888888888888888888888888888864

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.2e-10  Score=67.93  Aligned_cols=39  Identities=31%  Similarity=0.376  Sum_probs=34.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            7 GTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            788888999999999999999999998998888998864

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=4.7e-10  Score=65.71  Aligned_cols=40  Identities=25%  Similarity=0.400  Sum_probs=37.5

Q ss_pred             HHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       314 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      |+++|.+++||.|.+|++.|.+...|..|+++|++++||+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPS   40 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            5678999999999999999999999999999999999985

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.7e-10  Score=67.65  Aligned_cols=39  Identities=26%  Similarity=0.370  Sum_probs=34.2

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            7 GTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            778888999999999999999999999998889998864

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=4.6e-10  Score=67.21  Aligned_cols=39  Identities=31%  Similarity=0.427  Sum_probs=35.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            7 GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             cCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            788899999999999999999999999999999999964

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.4e-10  Score=67.80  Aligned_cols=39  Identities=28%  Similarity=0.404  Sum_probs=32.8

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|.|.+|++.|.+...|..|+++|++++||.|++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            7 GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             cCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            777888888888888888888888888888888888864

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.5e-10  Score=67.73  Aligned_cols=39  Identities=26%  Similarity=0.389  Sum_probs=33.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|++
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            7 GTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            777888888888888888888888888888888888864

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1e-10  Score=69.39  Aligned_cols=37  Identities=22%  Similarity=0.196  Sum_probs=18.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYEC  326 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  326 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            7 GSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             cCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            4444445555555555444444445444444444443

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4.4e-10  Score=67.31  Aligned_cols=39  Identities=28%  Similarity=0.362  Sum_probs=34.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|+.
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            7 GTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             cCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            788888999999999999999999998998888888864

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4.4e-10  Score=67.30  Aligned_cols=39  Identities=28%  Similarity=0.393  Sum_probs=34.7

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            7 GTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            788889999999999999999999999999999998864

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.97  E-value=4.4e-10  Score=65.85  Aligned_cols=40  Identities=20%  Similarity=0.359  Sum_probs=37.6

Q ss_pred             HHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       314 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPS   40 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCC
Confidence            5678999999999999999999999999999999999985

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=5.1e-10  Score=69.61  Aligned_cols=47  Identities=19%  Similarity=0.328  Sum_probs=43.1

Q ss_pred             cCCCCceeecCCCCCccCchhhhhhHhh-hhcCCCCcccCCCCccccc
Q psy1798           8 DRRNVIMYRCFVCPYLSRHKGDVKKHVR-KHTGEKPYECNLCDYKATQ   54 (353)
Q Consensus         8 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~~~~   54 (353)
                      .+.+.++|.|.+|++.|.....|..|++ +|.+++||.|++|++.|..
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4566889999999999999999999997 8999999999999999875

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.8e-10  Score=67.59  Aligned_cols=39  Identities=26%  Similarity=0.400  Sum_probs=32.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            7 GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            777788888888888888888888888888888888863

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4.7e-10  Score=67.17  Aligned_cols=39  Identities=26%  Similarity=0.369  Sum_probs=32.5

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|.|.+|++.|.+...|..|+++|++++||.|++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            7 GSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            777888888888888888888888888888888888863

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.2e-10  Score=68.35  Aligned_cols=38  Identities=21%  Similarity=0.502  Sum_probs=20.1

Q ss_pred             HHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCC
Q psy1798         315 VRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFI  352 (353)
Q Consensus       315 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  352 (353)
                      +++|.+++||.|++|++.|.+...|..|+++|++++||
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2eos_A            3 SGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS   40 (42)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSST
T ss_pred             CcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            34445555555555555555555555555555555554

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=6.1e-10  Score=65.93  Aligned_cols=38  Identities=26%  Similarity=0.364  Sum_probs=31.0

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN  327 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            7 GTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            77778888888888888888888888888888888774

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.8e-10  Score=67.15  Aligned_cols=39  Identities=23%  Similarity=0.257  Sum_probs=34.6

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|+.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            7 GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            788889999999999999999999999999999998863

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5.1e-10  Score=67.03  Aligned_cols=39  Identities=28%  Similarity=0.391  Sum_probs=33.5

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            7 GTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             cCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            778888888888888888888888888888888888863

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.7e-10  Score=67.18  Aligned_cols=39  Identities=33%  Similarity=0.454  Sum_probs=34.0

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|++
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            7 GTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            778888999999999999999999988888888888864

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=6.1e-10  Score=66.67  Aligned_cols=38  Identities=24%  Similarity=0.342  Sum_probs=34.2

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN  327 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            7 GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            78888999999999999999999999999999999886

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.4e-10  Score=67.29  Aligned_cols=39  Identities=31%  Similarity=0.384  Sum_probs=33.8

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            7 GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            778888999999999999889999988888888888864

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.95  E-value=1.6e-09  Score=76.09  Aligned_cols=61  Identities=18%  Similarity=0.199  Sum_probs=54.5

Q ss_pred             ceecCCCCccCCCchhHHHHHhh-hcCCCC--------ccCCCCCccccChHHHHHHHHHhcCCccccCcccCc
Q psy1798         114 WFQCFRCRYSNKFRSNFLRHIRT-HTGHKP--------YACTECGYASILSTDLRKHIERIHMPQFVEDVRHCV  178 (353)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~c~  178 (353)
                      .+.|..|++.|.+...|..|++. |.++++        |.|+.|++.|.....|..| .+.|.+   +++|.|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H-~~~H~~---~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH-IRVHTG---EKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHH-HHHHHT---CCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHH-HHhcCC---CCCCCCC
Confidence            37899999999999999999998 888877        9999999999999999999 567877   6777775

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=6.2e-10  Score=66.63  Aligned_cols=38  Identities=26%  Similarity=0.386  Sum_probs=33.2

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN  327 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            7 GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            77888889999999999888888898888888888885

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.95  E-value=2e-10  Score=68.87  Aligned_cols=40  Identities=28%  Similarity=0.425  Sum_probs=38.1

Q ss_pred             HHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       314 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCS
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCC
Confidence            7788999999999999999999999999999999999985

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5.3e-10  Score=66.95  Aligned_cols=39  Identities=31%  Similarity=0.439  Sum_probs=32.8

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|+.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            7 GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             cCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            777888888888888888888888888888888888863

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=9.6e-11  Score=68.74  Aligned_cols=39  Identities=26%  Similarity=0.497  Sum_probs=20.0

Q ss_pred             HHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCC
Q psy1798         314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFI  352 (353)
Q Consensus       314 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  352 (353)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   40 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS   40 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCC
Confidence            334445555555555555555555555555555555554

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=7.2e-10  Score=65.63  Aligned_cols=38  Identities=13%  Similarity=0.258  Sum_probs=29.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN  327 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (353)
                      |++++||+|.+|++.|.....|..|+++|++++||.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            7 GAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            67777777877888877777777777777777777774

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.7e-10  Score=69.12  Aligned_cols=41  Identities=34%  Similarity=0.417  Sum_probs=38.4

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=1.7e-10  Score=68.38  Aligned_cols=41  Identities=22%  Similarity=0.336  Sum_probs=38.5

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      +|+++|.+++||.|.+|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPS   42 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.94  E-value=1.7e-10  Score=67.64  Aligned_cols=37  Identities=19%  Similarity=0.268  Sum_probs=23.7

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYEC  326 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  326 (353)
                      |+++++|.|.+|++.|.+...|..|+++|++++||.|
T Consensus         6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            5566666666666666666666666666666666655

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4.7e-10  Score=67.20  Aligned_cols=39  Identities=26%  Similarity=0.409  Sum_probs=33.4

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            7 GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            778888888888888888888888888888888888864

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.1e-10  Score=68.49  Aligned_cols=37  Identities=24%  Similarity=0.355  Sum_probs=25.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYEC  326 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  326 (353)
                      |++++||+|.+|++.|.+...|..|+++|++++||.|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            6 SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             cCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            6666666666666666666666666666666666665

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=6.1e-10  Score=65.95  Aligned_cols=38  Identities=29%  Similarity=0.360  Sum_probs=28.9

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN  327 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (353)
                      |+++++|.|.+|++.|.+...|..|+++|++++||.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            7 GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            66777777777777777777777777777777777774

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.1e-10  Score=68.71  Aligned_cols=41  Identities=27%  Similarity=0.401  Sum_probs=38.5

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2e-10  Score=68.83  Aligned_cols=40  Identities=23%  Similarity=0.372  Sum_probs=38.0

Q ss_pred             HHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       314 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSG   42 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCS
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCC
Confidence            6788999999999999999999999999999999999985

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2e-10  Score=68.87  Aligned_cols=41  Identities=34%  Similarity=0.426  Sum_probs=38.3

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .|+++|.+++||.|++|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSS
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCC
Confidence            36788999999999999999999999999999999999985

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.93  E-value=1.7e-10  Score=69.12  Aligned_cols=41  Identities=24%  Similarity=0.384  Sum_probs=38.5

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSS
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.8e-10  Score=69.09  Aligned_cols=41  Identities=29%  Similarity=0.417  Sum_probs=38.6

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      +|+++|++++||.|.+|++.|.+...|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSG   42 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.8e-10  Score=69.03  Aligned_cols=41  Identities=22%  Similarity=0.387  Sum_probs=38.5

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      +|+++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCS
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2e-10  Score=68.86  Aligned_cols=41  Identities=32%  Similarity=0.451  Sum_probs=38.6

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      +|+++|.+++||.|.+|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=6.7e-10  Score=66.49  Aligned_cols=39  Identities=18%  Similarity=0.240  Sum_probs=34.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|+.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            7 GSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             SSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            788888999999999999999999999999889998863

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.1e-10  Score=68.73  Aligned_cols=41  Identities=22%  Similarity=0.357  Sum_probs=38.4

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSG   42 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.9e-10  Score=68.19  Aligned_cols=41  Identities=29%  Similarity=0.442  Sum_probs=38.5

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .|+++|.++++|.|++|++.|.+...|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPS   42 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.4e-10  Score=68.75  Aligned_cols=38  Identities=18%  Similarity=0.351  Sum_probs=26.0

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN  327 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (353)
                      |+++++|+|.+|++.|.....|..|+++|.+++||.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            7 GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             cCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            66666677777777777777777776666666666663

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.92  E-value=1.1e-09  Score=64.53  Aligned_cols=39  Identities=13%  Similarity=0.172  Sum_probs=35.2

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|++
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            778889999999999999999999999999999999864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.1e-10  Score=68.74  Aligned_cols=41  Identities=24%  Similarity=0.410  Sum_probs=38.4

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSG   42 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCS
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCC
Confidence            37788999999999999999999999999999999999984

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=2e-10  Score=68.89  Aligned_cols=41  Identities=24%  Similarity=0.336  Sum_probs=38.5

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSG   42 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.92  E-value=7.5e-10  Score=66.95  Aligned_cols=44  Identities=25%  Similarity=0.425  Sum_probs=40.4

Q ss_pred             ccCCCCceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCc
Q psy1798           7 NDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDY   50 (353)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   50 (353)
                      ..+.+.++|.|.+|++.|.....|..|+++|++++||.|++|++
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            34567889999999999999999999999999999999999985

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.5e-10  Score=68.39  Aligned_cols=41  Identities=29%  Similarity=0.499  Sum_probs=38.4

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      +|+++|++++||.|.+|++.|.+...|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSS
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2e-10  Score=68.09  Aligned_cols=41  Identities=24%  Similarity=0.322  Sum_probs=38.4

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPS   42 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.5e-10  Score=68.40  Aligned_cols=41  Identities=22%  Similarity=0.383  Sum_probs=38.5

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.1e-10  Score=68.72  Aligned_cols=41  Identities=29%  Similarity=0.396  Sum_probs=38.4

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .|+++|.+++||.|.+|++.|.+...|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSG   42 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.6e-10  Score=68.33  Aligned_cols=41  Identities=29%  Similarity=0.487  Sum_probs=38.5

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      +|+++|.++++|.|.+|++.|.....|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSG   42 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47788999999999999999999999999999999999984

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.91  E-value=1.1e-09  Score=64.11  Aligned_cols=40  Identities=25%  Similarity=0.355  Sum_probs=37.6

Q ss_pred             HHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       314 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      |+++|.+++||.|++|++.|.+...|..|+++|++++||+
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~   41 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS   41 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCC
Confidence            5678999999999999999999999999999999999985

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.2e-10  Score=68.65  Aligned_cols=41  Identities=27%  Similarity=0.392  Sum_probs=38.5

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSS
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=7.9e-10  Score=65.46  Aligned_cols=38  Identities=13%  Similarity=0.246  Sum_probs=29.5

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN  327 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (353)
                      |+++++|.|.+|++.|.+...|..|+++|.+++||.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            7 GHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            67777788888888888888888887777777777774

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=7.9e-10  Score=64.72  Aligned_cols=40  Identities=23%  Similarity=0.424  Sum_probs=37.7

Q ss_pred             HHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       314 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      |+++|.+++||.|.+|++.|.+...|..|+++|++++||+
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS   41 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCC
Confidence            5678999999999999999999999999999999999985

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=8.3e-10  Score=66.07  Aligned_cols=39  Identities=18%  Similarity=0.188  Sum_probs=33.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcC-CCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTG-EKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~  328 (353)
                      |++++||.|.+|++.|.+...|..|+++|++ ++||.|++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             cCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            7788888888888888888888888888888 88888863

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.1e-10  Score=68.78  Aligned_cols=41  Identities=29%  Similarity=0.478  Sum_probs=38.5

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      +|+++|.+++||.|.+|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSG   42 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTT
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=8.5e-10  Score=66.04  Aligned_cols=38  Identities=18%  Similarity=0.260  Sum_probs=33.9

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN  327 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (353)
                      |+++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            7 GTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             SCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            78888899999999999999999999999888999885

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=9.1e-10  Score=65.90  Aligned_cols=38  Identities=32%  Similarity=0.508  Sum_probs=32.6

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN  327 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|+
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            7 GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            77788888888888888888888888888888888885

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3e-10  Score=68.05  Aligned_cols=41  Identities=24%  Similarity=0.370  Sum_probs=38.4

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      +|+++|.++++|.|.+|++.|.....|..|+++|++++||+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCS
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCC
Confidence            36788999999999999999999999999999999999985

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=5.7e-10  Score=66.10  Aligned_cols=41  Identities=24%  Similarity=0.344  Sum_probs=38.5

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .|+++|.+++||.|++|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPS   42 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.9e-10  Score=69.00  Aligned_cols=41  Identities=24%  Similarity=0.514  Sum_probs=38.6

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      +|+++|++++||.|++|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSG   42 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSS
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            47788999999999999999999999999999999999985

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.90  E-value=1.2e-09  Score=65.34  Aligned_cols=44  Identities=25%  Similarity=0.327  Sum_probs=39.3

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|+.|++.|.....|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTG--EKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSS--SCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCC--CCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4555554  7889999999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=9.2e-10  Score=65.88  Aligned_cols=44  Identities=16%  Similarity=0.226  Sum_probs=39.4

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|+|..|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTG--ENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCS--SCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCC--CcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            4555554  7889999999999999999999999999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=1.1e-09  Score=64.87  Aligned_cols=43  Identities=14%  Similarity=0.169  Sum_probs=38.3

Q ss_pred             hhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         196 CKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       196 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      ++.|.+  .++|.|..|++.|.+.+.|..|+++|.+++||.|+.|
T Consensus         2 ~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSG--EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCSS--CCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCC--CcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            344544  7889999999999999999999999999999999987

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.7e-10  Score=68.28  Aligned_cols=40  Identities=25%  Similarity=0.376  Sum_probs=37.8

Q ss_pred             HHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       314 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSG   42 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCT
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCC
Confidence            6778999999999999999999999999999999999985

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=1.3e-09  Score=65.16  Aligned_cols=39  Identities=28%  Similarity=0.320  Sum_probs=35.5

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|.+
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            7 GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            788899999999999999999999999999999999964

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.4e-10  Score=68.49  Aligned_cols=41  Identities=24%  Similarity=0.408  Sum_probs=38.4

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      +|+++|.++++|.|.+|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.4e-10  Score=67.84  Aligned_cols=40  Identities=28%  Similarity=0.496  Sum_probs=37.6

Q ss_pred             HHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       314 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSG   42 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5678999999999999999999999999999999999985

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.6e-10  Score=68.31  Aligned_cols=41  Identities=24%  Similarity=0.411  Sum_probs=38.5

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   42 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSG   42 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSS
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=9.2e-10  Score=65.87  Aligned_cols=44  Identities=16%  Similarity=0.278  Sum_probs=39.4

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|+|+.|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTG--EKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSS--CCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCC--CCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            4555555  7889999999999999999999999999999999987

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.9e-10  Score=68.12  Aligned_cols=40  Identities=23%  Similarity=0.408  Sum_probs=38.0

Q ss_pred             HHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       314 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSG   42 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            6788999999999999999999999999999999999985

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.5e-10  Score=68.43  Aligned_cols=41  Identities=24%  Similarity=0.383  Sum_probs=38.3

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .|+++|.+++||.|++|++.|.+...|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSG   42 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            36788999999999999999999999999999999999985

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.2e-09  Score=65.33  Aligned_cols=44  Identities=16%  Similarity=0.155  Sum_probs=39.4

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|..|++.|...+.|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTG--VKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSC--CCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCC--CcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4555555  7889999999999999999999999999999999987

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.6e-10  Score=68.32  Aligned_cols=41  Identities=29%  Similarity=0.407  Sum_probs=38.4

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~   42 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSG   42 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcC
Confidence            37788999999999999999999999999999999999985

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.2e-09  Score=65.43  Aligned_cols=44  Identities=30%  Similarity=0.281  Sum_probs=39.5

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|..|++.|.+.+.|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTG--ERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSC--CCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCC--CCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4555555  7889999999999999999999999999999999987

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=7.6e-10  Score=65.53  Aligned_cols=38  Identities=16%  Similarity=0.203  Sum_probs=30.4

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN  327 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (353)
                      |+++++|.|.+|++.|.+...|..|+++|++++||.|.
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            7 GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            77777888888888888888888888888888888773

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.2e-09  Score=65.42  Aligned_cols=44  Identities=23%  Similarity=0.337  Sum_probs=39.4

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|+|..|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTG--EKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCC--CCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCC--CCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4555555  7889999999999999999999999999999999987

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=1.6e-09  Score=64.10  Aligned_cols=38  Identities=21%  Similarity=0.276  Sum_probs=31.6

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN  327 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (353)
                      |+++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            7 GAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            77778888888888888888888888888888888874

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.8e-10  Score=65.29  Aligned_cols=37  Identities=32%  Similarity=0.488  Sum_probs=35.9

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYEC  326 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  326 (353)
                      |+++++|+|.+|++.|.+...|..|+++|++++||.|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            6 SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             cCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            8889999999999999999999999999999999988

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=2.9e-10  Score=67.43  Aligned_cols=41  Identities=17%  Similarity=0.174  Sum_probs=38.5

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      +|+++|.+++||.|++|++.|.+...|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPS   42 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTT
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcC
Confidence            47788999999999999999999999999999999999985

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.2e-09  Score=65.31  Aligned_cols=44  Identities=23%  Similarity=0.317  Sum_probs=39.4

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|..|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSG--EKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCC--CCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCC--CcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            4555555  7889999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.1e-09  Score=65.59  Aligned_cols=44  Identities=20%  Similarity=0.328  Sum_probs=39.6

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|+|+.|++.|.+.+.|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTG--EKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCC--SSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCC--CCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            4555655  7889999999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.2e-09  Score=65.31  Aligned_cols=44  Identities=16%  Similarity=0.194  Sum_probs=39.4

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|+|+.|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTG--EKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSC--CCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCC--CCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            4555555  7889999999999999999999999999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.4e-09  Score=65.05  Aligned_cols=44  Identities=16%  Similarity=0.190  Sum_probs=39.1

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|+|+.|++.|.+...|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTG--EKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSS--SCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCC--CCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4455554  7889999999999999999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.5e-09  Score=64.95  Aligned_cols=44  Identities=23%  Similarity=0.282  Sum_probs=39.0

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|+|..|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 h~~~h~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTG--EKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSS--CCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCC--CCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3445544  7889999999999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.1e-09  Score=65.49  Aligned_cols=44  Identities=20%  Similarity=0.315  Sum_probs=39.2

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|+.|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTG--KKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSC--CSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCC--CcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            4455554  7889999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.3e-09  Score=65.26  Aligned_cols=44  Identities=16%  Similarity=0.248  Sum_probs=39.4

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|+|..|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTG--ERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSC--CCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCC--CCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4555554  7889999999999999999999999999999999987

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.2e-09  Score=65.97  Aligned_cols=40  Identities=20%  Similarity=0.360  Sum_probs=38.1

Q ss_pred             CCCcceeeCC--CCCCccCCcchHHHHHHHhcCCCCccCCCC
Q psy1798         290 RRNVIMYRCF--VCPYLSRHKGDVKKHVRKHTGEKPYECNLC  329 (353)
Q Consensus       290 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  329 (353)
                      |+++++|+|.  +|++.|.....|..|+++|++++||.|.+|
T Consensus         7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            7 GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8889999998  899999999999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=9.7e-10  Score=65.78  Aligned_cols=44  Identities=30%  Similarity=0.298  Sum_probs=39.4

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|..|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSS--TKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCC--SCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCC--CCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4555555  7889999999999999999999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.1e-09  Score=65.48  Aligned_cols=44  Identities=14%  Similarity=0.178  Sum_probs=39.5

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|..|++.|.+.+.|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSG--ERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSC--CCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCC--CCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4555555  7889999999999999999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.3e-09  Score=65.14  Aligned_cols=44  Identities=14%  Similarity=0.118  Sum_probs=39.1

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|..|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 h~~~h~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSV--EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCC--CSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCC--CCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4455554  7889999999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.3e-09  Score=65.23  Aligned_cols=44  Identities=23%  Similarity=0.367  Sum_probs=39.2

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|+.|++.|.+.+.|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSG--EKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSS--SCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCC--CCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            4455554  7889999999999999999999999999999999987

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=8.8e-10  Score=65.95  Aligned_cols=38  Identities=24%  Similarity=0.344  Sum_probs=31.7

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECN  327 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  327 (353)
                      |+++++|.|.+|++.|.....|..|+++|.+++||.|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            7 GTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             SCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            77778888888888888888888888888888888885

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.88  E-value=8.6e-10  Score=65.99  Aligned_cols=44  Identities=18%  Similarity=0.232  Sum_probs=39.4

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|+.|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTG--VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCC--CCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCC--CCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4555655  7889999999999999999999999999999999987

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=8.7e-10  Score=64.55  Aligned_cols=37  Identities=32%  Similarity=0.493  Sum_probs=35.8

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYEC  326 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  326 (353)
                      |++++||+|.+|++.|.+...|..|+++|++++||.|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            6 SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             cCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            8889999999999999999999999999999999988

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.5e-09  Score=64.88  Aligned_cols=44  Identities=18%  Similarity=0.167  Sum_probs=39.2

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|+.|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTG--EKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSS--CCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCC--CCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4555554  7889999999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.88  E-value=1.4e-09  Score=65.05  Aligned_cols=44  Identities=18%  Similarity=0.317  Sum_probs=39.3

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|+.|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTG--EKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTT--SCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCC--CcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4555555  7889999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.2e-09  Score=65.40  Aligned_cols=44  Identities=18%  Similarity=0.153  Sum_probs=39.3

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|+|..|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTG--EKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCC--CCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCC--CCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4555655  7889999999999999999999999999999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.88  E-value=9.6e-10  Score=65.78  Aligned_cols=44  Identities=18%  Similarity=0.240  Sum_probs=39.3

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|+|+.|++.|...+.|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMG--EKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCC--CCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCC--CcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            4555555  7889999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.4e-09  Score=65.02  Aligned_cols=44  Identities=23%  Similarity=0.257  Sum_probs=39.2

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|..|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTG--EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCC--CCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCC--CCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4455555  7889999999999999999999999999999999987

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=2.8e-10  Score=68.17  Aligned_cols=41  Identities=32%  Similarity=0.443  Sum_probs=38.5

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .|+++|.+++||.|++|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSG   42 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=2e-10  Score=68.13  Aligned_cols=41  Identities=22%  Similarity=0.247  Sum_probs=38.5

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      +|+++|.+++||.|.+|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPS   42 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCS
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            37788999999999999999999999999999999999985

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1e-09  Score=65.32  Aligned_cols=39  Identities=31%  Similarity=0.399  Sum_probs=34.7

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|++
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            778889999999999999999999999999999998864

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.1e-09  Score=65.55  Aligned_cols=44  Identities=18%  Similarity=0.244  Sum_probs=39.2

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|+|..|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTG--GKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSS--SCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCC--CCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4555554  7889999999999999999999999999999999987

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=2.5e-10  Score=68.40  Aligned_cols=41  Identities=22%  Similarity=0.395  Sum_probs=38.4

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSG   42 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            37788999999999999999999999999999999999984

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.2e-09  Score=65.32  Aligned_cols=44  Identities=20%  Similarity=0.331  Sum_probs=39.2

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|+|..|++.|.+.+.|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTG--EKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTC--CCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCC--CCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4455554  7889999999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.5e-09  Score=64.97  Aligned_cols=44  Identities=16%  Similarity=0.275  Sum_probs=39.3

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|+.|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTG--EKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSC--CCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCC--CcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4555554  7889999999999999999999999999999999987

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=5e-10  Score=66.37  Aligned_cols=40  Identities=15%  Similarity=0.104  Sum_probs=37.6

Q ss_pred             HHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       314 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPS   42 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCC
Confidence            5678999999999999999999999999999999999985

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=3.2e-10  Score=67.93  Aligned_cols=41  Identities=22%  Similarity=0.399  Sum_probs=38.4

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      +|+++|.+++||.|.+|++.|.....|..|+++|++++||.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSG   42 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            37788999999999999999999999999999999999984

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.6e-09  Score=64.78  Aligned_cols=44  Identities=23%  Similarity=0.250  Sum_probs=39.4

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|+.|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSG--EKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCC--CCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCC--CCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4555555  7889999999999999999999999999999999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.6e-09  Score=64.82  Aligned_cols=44  Identities=20%  Similarity=0.256  Sum_probs=39.3

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|..|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 h~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSG--EKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCS--SCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCC--CcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            4455555  7889999999999999999999999999999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.5e-09  Score=64.98  Aligned_cols=44  Identities=16%  Similarity=0.227  Sum_probs=39.1

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|..|++.|.+.+.|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAG--EKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSC--CCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCC--CCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4455554  7889999999999999999999999999999999987

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.87  E-value=1.5e-09  Score=67.39  Aligned_cols=51  Identities=12%  Similarity=0.191  Sum_probs=45.1

Q ss_pred             CCcCCCCccccccccccccccchhcccCCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCcc
Q psy1798         263 RFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYE  325 (353)
Q Consensus       263 ~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  325 (353)
                      +.| ...+.|..|++.           |+++++|.|.+|++.|.....|..|+++|++++||.
T Consensus         4 k~~-~~~~~l~~h~~~-----------H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            4 KRA-KHPPGTEKPRSR-----------SQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCC-SCSSCCCCCHHH-----------HTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccc-CCCcchhhHHHh-----------cCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            445 667778888777           899999999999999999999999999999999874

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.8e-09  Score=64.61  Aligned_cols=44  Identities=14%  Similarity=0.142  Sum_probs=39.2

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|..|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTG--EKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSS--CCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCC--CcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4555554  7889999999999999999999999999999999986

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.4e-09  Score=65.10  Aligned_cols=44  Identities=16%  Similarity=0.107  Sum_probs=39.1

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|+|+.|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTG--EKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSC--CCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCC--CcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4455554  7889999999999999999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.5e-09  Score=64.94  Aligned_cols=44  Identities=20%  Similarity=0.295  Sum_probs=39.1

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|+.|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTG--EKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSS--CCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCC--CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4455554  7889999999999999999999999999999999987

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=4e-10  Score=67.52  Aligned_cols=41  Identities=17%  Similarity=0.299  Sum_probs=38.2

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcC-CCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHN-MPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~-~~~~~  353 (353)
                      .|+++|.+++||.|.+|++.|.+...|..|+++|++ ++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~   43 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGP   43 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSS
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCC
Confidence            377889999999999999999999999999999999 99985

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.2e-09  Score=65.29  Aligned_cols=44  Identities=23%  Similarity=0.349  Sum_probs=39.4

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|..|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTG--EKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCC--CSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCC--CCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4455555  7889999999999999999999999999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.86  E-value=1.6e-09  Score=64.80  Aligned_cols=44  Identities=18%  Similarity=0.239  Sum_probs=39.4

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|+.|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTG--EKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCC--CCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCC--CcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4555555  7889999999999999999999999999999999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=2e-09  Score=64.38  Aligned_cols=43  Identities=16%  Similarity=0.160  Sum_probs=38.5

Q ss_pred             hhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         196 CKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       196 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      ++.|.+  .++|.|+.|++.|.+...|..|+++|.+++||.|+.|
T Consensus         4 ~~~h~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            4 GSSGSG--EKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCS--CCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCC--CCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            444544  7889999999999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.5e-09  Score=64.86  Aligned_cols=44  Identities=11%  Similarity=0.030  Sum_probs=39.4

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|+.|++.|.+.+.|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTG--EKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCC--CCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCC--CCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4555555  7889999999999999999999999999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.7e-09  Score=64.68  Aligned_cols=44  Identities=23%  Similarity=0.292  Sum_probs=39.5

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|..|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSG--EKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCC--CCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCC--CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4555655  7889999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.8e-09  Score=64.51  Aligned_cols=44  Identities=18%  Similarity=0.103  Sum_probs=39.1

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|+|..|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSR--EKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSC--CCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCC--CCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4455554  7889999999999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.9e-09  Score=64.46  Aligned_cols=44  Identities=18%  Similarity=0.204  Sum_probs=39.1

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|..|++.|.....|..|+++|.+++||.|+.|
T Consensus         3 h~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSG--EKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCC--CCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCC--CCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4455554  7889999999999999999999999999999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.3e-09  Score=65.13  Aligned_cols=44  Identities=18%  Similarity=0.205  Sum_probs=39.2

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|+|+.|++.|.+...|..|+++|.+++||.|+.|
T Consensus         3 H~~~h~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTG--EKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSS--CCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCC--CCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            4455554  7889999999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=1.6e-09  Score=64.77  Aligned_cols=44  Identities=16%  Similarity=0.066  Sum_probs=39.3

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|+|+.|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSG--EKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCC--CSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCC--CCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4555555  7889999999999999999999999999999999987

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=2.1e-09  Score=63.55  Aligned_cols=41  Identities=27%  Similarity=0.382  Sum_probs=38.6

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPS   42 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCC
Confidence            37788999999999999999999999999999999999985

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.84  E-value=2.4e-09  Score=64.04  Aligned_cols=43  Identities=16%  Similarity=0.166  Sum_probs=38.4

Q ss_pred             hhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCC
Q psy1798         196 CKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMC  240 (353)
Q Consensus       196 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  240 (353)
                      .+.|.+  .++|+|..|++.|.+...|..|+++|.+++||.|+.|
T Consensus         4 ~~~h~~--~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            4 GSSGAG--VNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCSSCC--CCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCC--CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344544  7889999999999999999999999999999999987

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.7e-09  Score=62.84  Aligned_cols=37  Identities=32%  Similarity=0.511  Sum_probs=24.8

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYEC  326 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  326 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            5566666666666666666666666666666666665

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=3.2e-09  Score=63.73  Aligned_cols=44  Identities=20%  Similarity=0.266  Sum_probs=39.2

Q ss_pred             hhhcCCCCCCcccccccchhhccCHHHHHHHHH-hhhCCCCcCCCCC
Q psy1798         195 HCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLR-KHTGRRPFPCDMC  240 (353)
Q Consensus       195 h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  240 (353)
                      |++.|.+  .++|.|..|++.|.....|..|++ +|.+++||.|+.|
T Consensus         3 H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTG--KKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCC--CCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCC--CCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4555555  788999999999999999999999 9999999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=3.4e-09  Score=63.34  Aligned_cols=42  Identities=24%  Similarity=0.342  Sum_probs=33.9

Q ss_pred             ccCCCCceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCC
Q psy1798           7 NDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC   48 (353)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (353)
                      ..+.+.++|+|.+|++.|.....|..|+++|.+++||.|++|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            5 SSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345567788888888888888888888888888888888876

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.80  E-value=3.2e-09  Score=63.08  Aligned_cols=42  Identities=24%  Similarity=0.320  Sum_probs=38.7

Q ss_pred             cCCCCceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCC
Q psy1798           8 DRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCD   49 (353)
Q Consensus         8 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   49 (353)
                      .+.++++|+|.+|++.|.....|..|+++|+++++|.|+.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            456788999999999999999999999999999999999996

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2.6e-09  Score=62.08  Aligned_cols=37  Identities=22%  Similarity=0.451  Sum_probs=35.2

Q ss_pred             HhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         317 KHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       317 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      +|.+++||.|++|++.|.....|..|+++|++++||.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS   40 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcC
Confidence            6889999999999999999999999999999999985

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=2.4e-09  Score=64.02  Aligned_cols=39  Identities=18%  Similarity=0.154  Sum_probs=36.4

Q ss_pred             HHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         315 VRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       315 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      +++|.++++|.|.+|++.|.....|..|+++|++++||.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCC
Confidence            457889999999999999999999999999999999985

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.75  E-value=3.9e-09  Score=62.05  Aligned_cols=38  Identities=24%  Similarity=0.435  Sum_probs=35.5

Q ss_pred             HHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         316 RKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       316 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      ++|+++++|.|.+|++.|.....|..|+++|++++||.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGP   40 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSS
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCcc
Confidence            36888999999999999999999999999999999985

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=1.1e-09  Score=65.10  Aligned_cols=39  Identities=23%  Similarity=0.446  Sum_probs=36.3

Q ss_pred             HHHhcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         315 VRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       315 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      .++|.++++|.|.+|++.|.....|..|+++|++++||+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGP   42 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCC
Confidence            456889999999999999999999999999999999985

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.75  E-value=2.2e-09  Score=60.76  Aligned_cols=36  Identities=28%  Similarity=0.532  Sum_probs=27.5

Q ss_pred             HHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       314 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      |+++|.+++||.|++|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            556777778888888888888888888888777663

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=1.9e-09  Score=61.07  Aligned_cols=35  Identities=20%  Similarity=0.456  Sum_probs=24.3

Q ss_pred             HhcCCCCccCCCCcccccCchHHHHHHhhhcCCCC
Q psy1798         317 KHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPF  351 (353)
Q Consensus       317 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  351 (353)
                      +|.+++||.|.+|++.|.....|..|+++|++++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            46666777777777777777777777777776654

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=6.6e-09  Score=62.01  Aligned_cols=41  Identities=32%  Similarity=0.389  Sum_probs=36.3

Q ss_pred             cCCCCceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCC
Q psy1798           8 DRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC   48 (353)
Q Consensus         8 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (353)
                      .+.++++|+|.+|++.|.....|..|+++|.+++||.|++|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45667889999999999999999999999999999999887

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.74  E-value=4.7e-09  Score=60.21  Aligned_cols=36  Identities=17%  Similarity=0.225  Sum_probs=22.8

Q ss_pred             CCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccC
Q psy1798         291 RNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYEC  326 (353)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  326 (353)
                      +++++|.|.+|++.|.....|..|+++|++++||.+
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            455666666666666666666666666666666654

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=4.3e-09  Score=62.86  Aligned_cols=41  Identities=22%  Similarity=0.201  Sum_probs=36.5

Q ss_pred             cCCCCceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCC
Q psy1798           8 DRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLC   48 (353)
Q Consensus         8 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (353)
                      .+.++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45667889999999999999999999999999999999887

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.73  E-value=5.3e-09  Score=58.28  Aligned_cols=34  Identities=24%  Similarity=0.430  Sum_probs=23.5

Q ss_pred             hcCCCCccCCCCcccccCchHHHHHHhhhcCCCC
Q psy1798         318 HTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPF  351 (353)
Q Consensus       318 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  351 (353)
                      |.++++|.|.+|++.|.+...|..|++.|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5566677777777777777777777777766654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.72  E-value=7.9e-09  Score=59.23  Aligned_cols=36  Identities=14%  Similarity=0.266  Sum_probs=33.1

Q ss_pred             hcCCCCccCCCCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         318 HTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       318 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      |.+++||.|.+||+.|.....|..|+++|++++||.
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccce
Confidence            567899999999999999999999999999999983

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.71  E-value=6.3e-09  Score=58.02  Aligned_cols=34  Identities=21%  Similarity=0.500  Sum_probs=25.0

Q ss_pred             hcCCCCccCCCCcccccCchHHHHHHhhhcCCCC
Q psy1798         318 HTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPF  351 (353)
Q Consensus       318 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  351 (353)
                      |.+++||.|.+|++.|.....|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5667777777777777777777777777777654

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.71  E-value=1.3e-09  Score=69.93  Aligned_cols=52  Identities=12%  Similarity=0.238  Sum_probs=44.2

Q ss_pred             HhhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCccccchhHH
Q psy1798         194 KHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNL  250 (353)
Q Consensus       194 ~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  250 (353)
                      .|++.|.+  .++|.|+.|++.|.....|.   ++|.+++||.|+.|++.|....++
T Consensus         4 ~h~~~H~~--~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            4 TDERDSTN--RASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCSSSCCS--SSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hHHHHcCC--CCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            45556655  78999999999999988876   889999999999999999987665

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.66  E-value=1.5e-09  Score=74.71  Aligned_cols=55  Identities=15%  Similarity=0.214  Sum_probs=47.8

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      |+++++|+|.+|++.|.....|..|+++|++++||.|..|..    ...|..|+++|.+
T Consensus        20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~~~~   74 (88)
T 1x6f_A           20 RLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKYADG   74 (88)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhccccc
Confidence            888999999999999999999999999999999999987664    4566667777665

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.66  E-value=1.7e-08  Score=55.35  Aligned_cols=30  Identities=13%  Similarity=0.312  Sum_probs=17.7

Q ss_pred             CccCCCCcccccCchHHHHHHhhhcCCCCC
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKLKHNMPFI  352 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  352 (353)
                      ||.|++||+.|.....|..|+++|++++||
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            555666666665556666666655555555

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.64  E-value=1.4e-08  Score=57.72  Aligned_cols=36  Identities=17%  Similarity=0.331  Sum_probs=25.2

Q ss_pred             hcCCCCccCC--CCcccccCchHHHHHHhhhcCCCCCC
Q psy1798         318 HTGEKPYECN--LCDYKATQNSSIHFHMKLKHNMPFIP  353 (353)
Q Consensus       318 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~  353 (353)
                      |++++||.|.  .|++.|.....|..|+++|++++||+
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            4556777777  47777777777777777777777764

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.63  E-value=2.7e-08  Score=63.11  Aligned_cols=41  Identities=17%  Similarity=0.173  Sum_probs=35.7

Q ss_pred             ccCCCcceeeCCC--CCCccCCcchHHHHH-HHhcCCCCccCCC
Q psy1798         288 NDRRNVIMYRCFV--CPYLSRHKGDVKKHV-RKHTGEKPYECNL  328 (353)
Q Consensus       288 ~~~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~  328 (353)
                      ...++++||+|..  |+++|.....|..|+ ++|++++||.|..
T Consensus        20 ~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           20 TRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            3377889999975  999999999999997 6899999999953

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=1.6e-08  Score=57.19  Aligned_cols=31  Identities=19%  Similarity=0.540  Sum_probs=16.1

Q ss_pred             cCCCCccCCC--CcccccCchHHHHHHhhhcCC
Q psy1798         319 TGEKPYECNL--CDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       319 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      ++++||.|+.  |+++|.....|.+|+++|+++
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4455555543  555555555555555555543

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.59  E-value=3.3e-08  Score=62.75  Aligned_cols=36  Identities=17%  Similarity=0.220  Sum_probs=32.5

Q ss_pred             hcCCCCccCCC--CcccccCchHHHHHH-hhhcCCCCCC
Q psy1798         318 HTGEKPYECNL--CDYKATQNSSIHFHM-KLKHNMPFIP  353 (353)
Q Consensus       318 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~~h~~~~~~  353 (353)
                      .++++||+|..  |+++|....+|..|+ ++|++++||+
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~   60 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAF   60 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcc
Confidence            46789999975  999999999999998 6899999985

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.58  E-value=4e-08  Score=53.85  Aligned_cols=32  Identities=19%  Similarity=0.277  Sum_probs=30.2

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhcCCCCcc
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYE  325 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  325 (353)
                      +||.|.+|++.|.....|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47999999999999999999999999999985

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=5.5e-08  Score=58.47  Aligned_cols=42  Identities=19%  Similarity=0.354  Sum_probs=36.7

Q ss_pred             ccCCCCceeecC--CCCCccCchhhhhhHhhhhcCCCCcccCCC
Q psy1798           7 NDRRNVIMYRCF--VCPYLSRHKGDVKKHVRKHTGEKPYECNLC   48 (353)
Q Consensus         7 ~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   48 (353)
                      ..+.+.++|+|.  .|++.|.....|..|+++|.+++||.|..|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445677889998  899999999999999999999999999887

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.53  E-value=4.1e-08  Score=54.94  Aligned_cols=32  Identities=22%  Similarity=0.653  Sum_probs=16.4

Q ss_pred             hcCCCCccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         318 HTGEKPYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       318 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      |.+++||.|.+|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            44445555555555555555555555555443

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.53  E-value=6.2e-08  Score=53.77  Aligned_cols=34  Identities=18%  Similarity=0.287  Sum_probs=31.4

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKP  323 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  323 (353)
                      |+++++|.|.+|++.|.+...|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            6778999999999999999999999999998765

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=4.3e-08  Score=54.88  Aligned_cols=32  Identities=28%  Similarity=0.710  Sum_probs=17.4

Q ss_pred             hcCCCCccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         318 HTGEKPYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       318 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      |.+++||.|.+|++.|.+...|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            44555555555555555555555555555543

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=4.1e-08  Score=54.96  Aligned_cols=32  Identities=19%  Similarity=0.413  Sum_probs=20.0

Q ss_pred             hcCCCCccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         318 HTGEKPYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       318 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      |.+++||.|.+|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            45556666666666666666666666666554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=6e-08  Score=54.25  Aligned_cols=32  Identities=19%  Similarity=0.335  Sum_probs=17.5

Q ss_pred             hcCCCCccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         318 HTGEKPYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       318 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      |.++++|.|.+|++.|.+...|..|+++|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            44455555555555555555555555555543

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=5.3e-08  Score=54.90  Aligned_cols=33  Identities=18%  Similarity=0.469  Sum_probs=19.0

Q ss_pred             HhcCCCCccCCCCcccccCc-hHHHHHHhhhcCC
Q psy1798         317 KHTGEKPYECNLCDYKATQN-SSIHFHMKLKHNM  349 (353)
Q Consensus       317 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~~h~~  349 (353)
                      +|.+++||.|++|++.|... ..|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            34555566666666666665 5666666555544

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=6.8e-08  Score=54.40  Aligned_cols=34  Identities=21%  Similarity=0.304  Sum_probs=32.0

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKP  323 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  323 (353)
                      |+++++|.|.+|++.|.....|..|+++|++++|
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            7888999999999999999999999999998875

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.49  E-value=7.1e-08  Score=53.55  Aligned_cols=34  Identities=18%  Similarity=0.341  Sum_probs=31.5

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKP  323 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  323 (353)
                      |+++++|.|.+|++.|.....|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            6778999999999999999999999999998765

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=2.2e-08  Score=56.58  Aligned_cols=32  Identities=19%  Similarity=0.505  Sum_probs=16.9

Q ss_pred             HhcCCCCccCCCCcccccCchHHHHH-HhhhcC
Q psy1798         317 KHTGEKPYECNLCDYKATQNSSIHFH-MKLKHN  348 (353)
Q Consensus       317 ~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~h~  348 (353)
                      +|.+++||.|+.|++.|.+...|..| ++.|++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            34455555555555555555555555 444443

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=7.6e-08  Score=53.84  Aligned_cols=32  Identities=19%  Similarity=0.456  Sum_probs=16.0

Q ss_pred             hcCCCCccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         318 HTGEKPYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       318 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      |.+++||.|++|++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            33444555555555555555555555555443

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=1.2e-07  Score=53.46  Aligned_cols=32  Identities=25%  Similarity=0.508  Sum_probs=29.8

Q ss_pred             CCCcceeeCCC--CCCccCCcchHHHHHHHhcCC
Q psy1798         290 RRNVIMYRCFV--CPYLSRHKGDVKKHVRKHTGE  321 (353)
Q Consensus       290 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  321 (353)
                      +++++||+|..  |+++|.++..|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            77889999986  999999999999999999875

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.43  E-value=1.3e-08  Score=55.40  Aligned_cols=31  Identities=13%  Similarity=0.344  Sum_probs=25.8

Q ss_pred             CCccCCCCcccccCchHHHHHHhhhcCCCCC
Q psy1798         322 KPYECNLCDYKATQNSSIHFHMKLKHNMPFI  352 (353)
Q Consensus       322 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  352 (353)
                      +||.|.+||+.|.....|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4788888888888888888888888888876

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.43  E-value=1.6e-07  Score=53.19  Aligned_cols=36  Identities=14%  Similarity=0.181  Sum_probs=32.5

Q ss_pred             CCCcceeeCC--CCCCccCCcchHHHHHHHhcCCCCcc
Q psy1798         290 RRNVIMYRCF--VCPYLSRHKGDVKKHVRKHTGEKPYE  325 (353)
Q Consensus       290 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~  325 (353)
                      |+++++|+|.  .|++.|.....|..|+++|++++||.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            4577899999  59999999999999999999999873

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.42  E-value=7.7e-08  Score=57.83  Aligned_cols=32  Identities=19%  Similarity=0.336  Sum_probs=17.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHH-HhcCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVR-KHTGE  321 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~  321 (353)
                      |+++++|.|.+|++.|.....|..|++ +|.++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            445555555555555555555555555 55543

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.42  E-value=1.7e-07  Score=52.68  Aligned_cols=32  Identities=13%  Similarity=0.240  Sum_probs=30.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGE  321 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (353)
                      |++++||+|.+|++.|.+...|..|+++|.++
T Consensus         6 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            6 STGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             TCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            88899999999999999999999999999764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=2.1e-07  Score=51.89  Aligned_cols=33  Identities=42%  Similarity=0.716  Sum_probs=30.7

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      |++++||+|.+|++.|.....|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            788899999999999999999999999998764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.38  E-value=1.3e-07  Score=52.50  Aligned_cols=31  Identities=19%  Similarity=0.375  Sum_probs=21.7

Q ss_pred             hhCCCCcCCCCCCccccchhHHHHhhhhccc
Q psy1798         229 HTGRRPFPCDMCEYSAAQKWNLKMHMHFLCH  259 (353)
Q Consensus       229 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~C~  259 (353)
                      +.+++||.|+.|++.|...+.|..|++|.|.
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~py~C~   33 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQAYYCS   33 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHHHTST
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCCeECc
Confidence            3466777777777777777777777766664

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=4.3e-08  Score=65.22  Aligned_cols=19  Identities=21%  Similarity=0.424  Sum_probs=7.0

Q ss_pred             HhhhhcCCCCcccCCCCcc
Q psy1798          33 HVRKHTGEKPYECNLCDYK   51 (353)
Q Consensus        33 H~~~h~~~~~~~C~~C~~~   51 (353)
                      |++.+.+.+|+.|+.|++.
T Consensus         8 H~~~~c~~r~~~C~~C~~~   26 (75)
T 2d9k_A            8 HEETECPLRLAVCQHCDLE   26 (75)
T ss_dssp             CCCCCCCCCCEECSSSCCE
T ss_pred             hCcccCCCcccCCcccChH
Confidence            3333333333333333333

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=2.3e-07  Score=51.78  Aligned_cols=33  Identities=30%  Similarity=0.687  Sum_probs=30.6

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      |++++||+|.+|++.|.....|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            788899999999999999999999999998753

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.36  E-value=3.1e-07  Score=48.69  Aligned_cols=30  Identities=30%  Similarity=0.779  Sum_probs=20.6

Q ss_pred             CCccCCCCcccccCchHHHHHHhhhcCCCC
Q psy1798         322 KPYECNLCDYKATQNSSIHFHMKLKHNMPF  351 (353)
Q Consensus       322 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  351 (353)
                      +||.|.+|++.|.....|..|+++|++.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            356777777777777777777777766553

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=3.9e-07  Score=50.77  Aligned_cols=33  Identities=24%  Similarity=0.292  Sum_probs=30.5

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      |+++++|.|.+|++.|.....|..|+++|++++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            778899999999999999999999999998764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=2.6e-07  Score=51.56  Aligned_cols=33  Identities=18%  Similarity=0.418  Sum_probs=30.4

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      |++++||+|.+|++.|.....|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            778899999999999999999999999998753

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=4.1e-07  Score=50.74  Aligned_cols=33  Identities=27%  Similarity=0.502  Sum_probs=30.3

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      +.++++|+|.+|++.|.....|..|+++|++++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            677899999999999999999999999998763

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.32  E-value=1.6e-07  Score=52.20  Aligned_cols=32  Identities=16%  Similarity=0.364  Sum_probs=23.9

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      ..+++||+|.+|+++|.+++.|..|+       ||.|+.
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            45677888888888888888888886       666653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=3.9e-07  Score=51.15  Aligned_cols=33  Identities=21%  Similarity=0.478  Sum_probs=30.5

Q ss_pred             CCCcceeeCCCCCCccCCc-chHHHHHHHhcCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHK-GDVKKHVRKHTGEK  322 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~~  322 (353)
                      |+++++|+|.+|++.|... ..|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            7788999999999999999 99999999998763

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.31  E-value=2.7e-07  Score=51.90  Aligned_cols=31  Identities=23%  Similarity=0.435  Sum_probs=15.9

Q ss_pred             CCCcceeeCCC--CCCccCCcchHHHHHHHhcC
Q psy1798         290 RRNVIMYRCFV--CPYLSRHKGDVKKHVRKHTG  320 (353)
Q Consensus       290 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  320 (353)
                      ++++++|.|.+  |++.|.....|..|+++|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            44445555542  55555555555555555544

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.31  E-value=4.4e-08  Score=58.67  Aligned_cols=35  Identities=20%  Similarity=0.309  Sum_probs=18.7

Q ss_pred             HHHhcCCCCccCC--CCcccccCchHHHHHHhhhcCC
Q psy1798         315 VRKHTGEKPYECN--LCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       315 ~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      +..|.+++||.|.  .|++.|.....|..|+++|+++
T Consensus        10 ~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           10 YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            3345555555553  4555555555555555555544

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.31  E-value=3.5e-07  Score=48.10  Aligned_cols=28  Identities=18%  Similarity=0.473  Sum_probs=18.0

Q ss_pred             CCccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         322 KPYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       322 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3566666666666666666666666654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.30  E-value=3.3e-07  Score=48.57  Aligned_cols=28  Identities=25%  Similarity=0.565  Sum_probs=16.2

Q ss_pred             CCccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         322 KPYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       322 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            4555666666666666666665555544

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.29  E-value=4.8e-07  Score=47.50  Aligned_cols=27  Identities=15%  Similarity=0.449  Sum_probs=15.3

Q ss_pred             CccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      ||.|.+|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            455555555555555555555555543

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.27  E-value=3.5e-07  Score=47.70  Aligned_cols=27  Identities=19%  Similarity=0.677  Sum_probs=17.9

Q ss_pred             CCccCCCCcccccCchHHHHHHhhhcC
Q psy1798         322 KPYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       322 ~~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      +||.|++|++.|.+...|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            566677777777766777777666553

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.26  E-value=6e-07  Score=47.05  Aligned_cols=27  Identities=26%  Similarity=0.439  Sum_probs=16.1

Q ss_pred             CccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      ||.|..|++.|.+...|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            556666666666666666666655554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.25  E-value=6.4e-07  Score=57.36  Aligned_cols=41  Identities=15%  Similarity=0.263  Sum_probs=34.8

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcc
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDY  331 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  331 (353)
                      ++.++||+|.+|++.|.+...|..|+++|+++. ..+.+++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~~   48 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYIDL   48 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-cccccccC
Confidence            778899999999999999999999999998854 45666654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.25  E-value=8.7e-07  Score=47.80  Aligned_cols=28  Identities=29%  Similarity=0.584  Sum_probs=19.4

Q ss_pred             CCccCC--CCcccccCchHHHHHHhhhcCC
Q psy1798         322 KPYECN--LCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       322 ~~~~C~--~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      +||.|.  .|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            567776  6777777777777777776664

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.24  E-value=4.9e-07  Score=46.66  Aligned_cols=25  Identities=28%  Similarity=0.747  Sum_probs=15.0

Q ss_pred             CCccCCCCcccccCchHHHHHHhhh
Q psy1798         322 KPYECNLCDYKATQNSSIHFHMKLK  346 (353)
Q Consensus       322 ~~~~C~~C~~~f~~~~~l~~H~~~~  346 (353)
                      +||.|.+||+.|.+...|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4566666666666666666665554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=7.2e-07  Score=50.07  Aligned_cols=32  Identities=31%  Similarity=0.552  Sum_probs=29.7

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHH-HHHhcCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKH-VRKHTGE  321 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  321 (353)
                      |++++||+|.+|++.|..+..|..| +++|+++
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            7889999999999999999999999 8899764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.22  E-value=3.6e-07  Score=47.25  Aligned_cols=25  Identities=32%  Similarity=0.661  Sum_probs=17.0

Q ss_pred             CCccCCCCcccccCchHHHHHHhhh
Q psy1798         322 KPYECNLCDYKATQNSSIHFHMKLK  346 (353)
Q Consensus       322 ~~~~C~~C~~~f~~~~~l~~H~~~~  346 (353)
                      +||.|++||+.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            5666777777777777777776655

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.20  E-value=6.3e-07  Score=46.99  Aligned_cols=27  Identities=19%  Similarity=0.550  Sum_probs=13.6

Q ss_pred             CccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      ||.|.+|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            445555555555555555555554443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.20  E-value=9.9e-07  Score=49.49  Aligned_cols=34  Identities=15%  Similarity=0.298  Sum_probs=30.7

Q ss_pred             HhcCCCCccCCC--CcccccCchHHHHHHhhhcCCC
Q psy1798         317 KHTGEKPYECNL--CDYKATQNSSIHFHMKLKHNMP  350 (353)
Q Consensus       317 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~  350 (353)
                      .|++++||.|.+  |++.|.....|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            367899999995  9999999999999999998864

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.19  E-value=9.1e-07  Score=46.75  Aligned_cols=30  Identities=20%  Similarity=0.370  Sum_probs=27.1

Q ss_pred             cceeeCCCCCCccCCcchHHHHHHHhcCCC
Q psy1798         293 VIMYRCFVCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      ++||.|..|++.|.+...|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            368999999999999999999999998753

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.19  E-value=1.1e-06  Score=46.00  Aligned_cols=29  Identities=34%  Similarity=0.579  Sum_probs=26.3

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhcCCC
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            46999999999999999999999998753

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.19  E-value=7.9e-07  Score=45.78  Aligned_cols=26  Identities=27%  Similarity=0.717  Sum_probs=17.7

Q ss_pred             CccCCCCcccccCchHHHHHHhhhcC
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      ||.|.+|++.|.+...|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46677777777777777777776665

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.49  E-value=2.1e-07  Score=49.46  Aligned_cols=28  Identities=21%  Similarity=0.572  Sum_probs=17.3

Q ss_pred             CCccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         322 KPYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       322 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      +||.|.+|++.|.+...|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4566666666666666666666666554

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.49  E-value=2.1e-07  Score=49.07  Aligned_cols=27  Identities=30%  Similarity=0.528  Sum_probs=16.2

Q ss_pred             CccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      ||.|.+|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            556666666666666666666655543

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.18  E-value=7.5e-07  Score=53.40  Aligned_cols=35  Identities=17%  Similarity=0.487  Sum_probs=29.6

Q ss_pred             HhcCCCCccCCCCcccccCchHHHHHHh-hhcCCCC
Q psy1798         317 KHTGEKPYECNLCDYKATQNSSIHFHMK-LKHNMPF  351 (353)
Q Consensus       317 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~h~~~~  351 (353)
                      +|++++||.|.+|++.|.....|..|++ +|+++.+
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4789999999999999999999999999 8887653

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.18  E-value=3.2e-07  Score=62.93  Aligned_cols=55  Identities=15%  Similarity=0.185  Sum_probs=45.8

Q ss_pred             eccCCCCceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhc
Q psy1798           6 LNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV   64 (353)
Q Consensus         6 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~   64 (353)
                      ...+.+.++|+|..|++.|.....|..|+++|++++||.|..|..    ...|..|.+.
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~   71 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKY   71 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhcc
Confidence            344667899999999999999999999999999999999987653    4556666665

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.18  E-value=1e-06  Score=47.15  Aligned_cols=28  Identities=18%  Similarity=0.553  Sum_probs=17.8

Q ss_pred             CCccCC--CCcccccCchHHHHHHhhhcCC
Q psy1798         322 KPYECN--LCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       322 ~~~~C~--~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      +||.|+  .||+.|.....|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            356665  6666666666666666666654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.16  E-value=1e-06  Score=46.24  Aligned_cols=29  Identities=21%  Similarity=0.403  Sum_probs=26.5

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhcCCC
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            47999999999999999999999998763

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.15  E-value=1.6e-06  Score=45.79  Aligned_cols=30  Identities=20%  Similarity=0.584  Sum_probs=27.1

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhcCCCC
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHTGEKP  323 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  323 (353)
                      ++|.|.+|++.|.....|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            369999999999999999999999988754

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.14  E-value=1.3e-06  Score=45.69  Aligned_cols=29  Identities=34%  Similarity=0.610  Sum_probs=26.5

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhcCCC
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47999999999999999999999998764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.13  E-value=1.7e-06  Score=45.22  Aligned_cols=29  Identities=21%  Similarity=0.403  Sum_probs=26.4

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhcCCC
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            47999999999999999999999998764

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.11  E-value=2.2e-06  Score=51.02  Aligned_cols=33  Identities=12%  Similarity=0.439  Sum_probs=30.3

Q ss_pred             CCCcceeeCC--CCCCccCCcchHHHHHHHhcCCC
Q psy1798         290 RRNVIMYRCF--VCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       290 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      |++++||+|.  .|++.|.....|..|+++|++++
T Consensus        13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            7888999996  79999999999999999998764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.10  E-value=3e-06  Score=54.22  Aligned_cols=34  Identities=15%  Similarity=0.195  Sum_probs=31.1

Q ss_pred             hcCCCCccCCCCcccccCchHHHHHHhhhcCCCC
Q psy1798         318 HTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPF  351 (353)
Q Consensus       318 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~  351 (353)
                      +..++||.|.+|++.|.....|..|+++|++.+.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            5678999999999999999999999999998764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.10  E-value=1.5e-06  Score=44.78  Aligned_cols=27  Identities=33%  Similarity=0.626  Sum_probs=24.7

Q ss_pred             cceeeCCCCCCccCCcchHHHHHHHhc
Q psy1798         293 VIMYRCFVCPYLSRHKGDVKKHVRKHT  319 (353)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  319 (353)
                      ++||.|.+|++.|.+...|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            368999999999999999999999874

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.08  E-value=4.5e-07  Score=49.07  Aligned_cols=30  Identities=17%  Similarity=0.319  Sum_probs=21.9

Q ss_pred             eeecCCCCCccCchhhhhhHhhhhcCCCCc
Q psy1798          14 MYRCFVCPYLSRHKGDVKKHVRKHTGEKPY   43 (353)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   43 (353)
                      +|+|..|++.|.....|..|+++|++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            577777777777777777777777776665

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.06  E-value=2.6e-06  Score=45.81  Aligned_cols=30  Identities=20%  Similarity=0.296  Sum_probs=27.0

Q ss_pred             cceeeCC--CCCCccCCcchHHHHHHHhcCCC
Q psy1798         293 VIMYRCF--VCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       293 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      ++||.|.  .|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3689999  89999999999999999998764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.06  E-value=1.4e-06  Score=45.28  Aligned_cols=28  Identities=36%  Similarity=0.546  Sum_probs=25.2

Q ss_pred             cceeeCCCCCCccCCcchHHHHHHHhcC
Q psy1798         293 VIMYRCFVCPYLSRHKGDVKKHVRKHTG  320 (353)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  320 (353)
                      +++|.|.+|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            3679999999999999999999998864

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.05  E-value=2.4e-06  Score=45.14  Aligned_cols=27  Identities=26%  Similarity=0.530  Sum_probs=16.9

Q ss_pred             CccCCCCcccccCchHHHHH-HhhhcCC
Q psy1798         323 PYECNLCDYKATQNSSIHFH-MKLKHNM  349 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H-~~~~h~~  349 (353)
                      ||.|..|++.|.+...|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            56666666666666666666 4555543

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.32  E-value=5.5e-07  Score=47.35  Aligned_cols=29  Identities=34%  Similarity=0.596  Sum_probs=26.2

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhcCCC
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      +||+|.+|++.|.+...|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            47999999999999999999999998753

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.32  E-value=5.5e-07  Score=45.99  Aligned_cols=24  Identities=29%  Similarity=0.672  Sum_probs=14.2

Q ss_pred             CccCCCCcccccCchHHHHHHhhh
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKLK  346 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~~  346 (353)
                      ||.|++||+.|.+...|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            555666666666666666665554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.03  E-value=2.3e-06  Score=45.68  Aligned_cols=29  Identities=31%  Similarity=0.574  Sum_probs=26.3

Q ss_pred             ceeeCC--CCCCccCCcchHHHHHHHhcCCC
Q psy1798         294 IMYRCF--VCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       294 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      +||.|.  .|++.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            479998  99999999999999999998764

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.29  E-value=6.5e-07  Score=47.42  Aligned_cols=28  Identities=39%  Similarity=0.704  Sum_probs=26.1

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhcCC
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHTGE  321 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (353)
                      +||.|..|++.|.+...|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            6799999999999999999999999875

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.02  E-value=1.1e-06  Score=45.30  Aligned_cols=27  Identities=26%  Similarity=0.522  Sum_probs=24.4

Q ss_pred             cceeeCCCCCCccCCcchHHHHHHHhc
Q psy1798         293 VIMYRCFVCPYLSRHKGDVKKHVRKHT  319 (353)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  319 (353)
                      ++||+|.+|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            367999999999999999999998874

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.00  E-value=2.1e-06  Score=44.10  Aligned_cols=27  Identities=26%  Similarity=0.512  Sum_probs=23.7

Q ss_pred             eeeCCCCCCccCCcchHHHHHHHhcCC
Q psy1798         295 MYRCFVCPYLSRHKGDVKKHVRKHTGE  321 (353)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (353)
                      ||+|.+|++.|.+...|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            589999999999999999999999763

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.15  E-value=1.4e-06  Score=44.40  Aligned_cols=26  Identities=23%  Similarity=0.423  Sum_probs=23.7

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhc
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHT  319 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~  319 (353)
                      +||.|.+|++.|.+...|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47999999999999999999998874

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.90  E-value=4.2e-06  Score=44.12  Aligned_cols=29  Identities=21%  Similarity=0.425  Sum_probs=25.5

Q ss_pred             ceeeCCCCCCccCCcchHHHH-HHHhcCCC
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKH-VRKHTGEK  322 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~  322 (353)
                      +||.|..|++.|.+...|..| +++|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            469999999999999999999 68888753

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.86  E-value=5.9e-06  Score=43.08  Aligned_cols=25  Identities=20%  Similarity=0.463  Sum_probs=16.2

Q ss_pred             CccCC--CCcccccCchHHHHHHhhhc
Q psy1798         323 PYECN--LCDYKATQNSSIHFHMKLKH  347 (353)
Q Consensus       323 ~~~C~--~C~~~f~~~~~l~~H~~~~h  347 (353)
                      +|.|+  .|++.|.+...|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            56666  66666666666666666654

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.63  E-value=1.8e-05  Score=41.10  Aligned_cols=27  Identities=26%  Similarity=0.624  Sum_probs=24.5

Q ss_pred             ceeeCC--CCCCccCCcchHHHHHHHhcC
Q psy1798         294 IMYRCF--VCPYLSRHKGDVKKHVRKHTG  320 (353)
Q Consensus       294 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  320 (353)
                      ++|.|.  .|++.|.+...|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            369999  999999999999999999864

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.51  E-value=0.00011  Score=46.53  Aligned_cols=50  Identities=28%  Similarity=0.598  Sum_probs=43.4

Q ss_pred             CCCCCCccCCcchHHHHH-HHhcCCC------CccCC--CCcccccCchHHHHHHhhhc
Q psy1798         298 CFVCPYLSRHKGDVKKHV-RKHTGEK------PYECN--LCDYKATQNSSIHFHMKLKH  347 (353)
Q Consensus       298 C~~C~~~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~~h  347 (353)
                      ...|++.|.+...|..|+ ..|.+.+      +|.|.  -|++.+.....|..|++..|
T Consensus         6 W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            6 WKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             eCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            356999999999999998 4787655      79994  99999999999999999876

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.11  E-value=0.001  Score=42.11  Aligned_cols=49  Identities=24%  Similarity=0.495  Sum_probs=38.5

Q ss_pred             CCCCccCCCchhHHHHHh-hhcCCC------CccCC--CCCccccChHHHHHHHHHhc
Q psy1798         118 FRCRYSNKFRSNFLRHIR-THTGHK------PYACT--ECGYASILSTDLRKHIERIH  166 (353)
Q Consensus       118 ~~C~~~f~~~~~l~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~~H  166 (353)
                      ..|++.|.+...|..|+. .|.+.+      +|.|.  .|+..+.....|..|++..|
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            348899999999999985 676654      68886  78888888888888876554

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.66  E-value=0.0014  Score=37.27  Aligned_cols=28  Identities=21%  Similarity=0.335  Sum_probs=22.8

Q ss_pred             CCCcCCCCCCccccchhHHHHhhhhccc
Q psy1798         232 RRPFPCDMCEYSAAQKWNLKMHMHFLCH  259 (353)
Q Consensus       232 ~~~~~C~~C~~~f~~~~~l~~H~~~~C~  259 (353)
                      ..+|.|+.|+..|.....|+.|+.|.|+
T Consensus        10 ~~~~~CPrCn~~f~~~~sLr~HmkycCp   37 (49)
T 2e72_A           10 GGRKICPRCNAQFRVTEALRGHMCYCCP   37 (49)
T ss_dssp             SSCCCCTTTCCCCSSHHHHHHHHHHHCT
T ss_pred             CCceeCCcccccccchHHHHhhhhhcCc
Confidence            3578888888888888888888877665

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.56  E-value=0.0016  Score=47.58  Aligned_cols=52  Identities=19%  Similarity=0.318  Sum_probs=43.0

Q ss_pred             ceeeCCCCCCccCCcchHHHHH--HHhc-------------------------------CCCCccCCCCcccccCchHHH
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHV--RKHT-------------------------------GEKPYECNLCDYKATQNSSIH  340 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~--~~h~-------------------------------~~~~~~C~~C~~~f~~~~~l~  340 (353)
                      +++.|.+|+..|.+.+.+..|.  +.|.                               +...|.|.+|++.|.+...|.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            5689999999999999999997  3441                               234588999999999999999


Q ss_pred             HHHhh
Q psy1798         341 FHMKL  345 (353)
Q Consensus       341 ~H~~~  345 (353)
                      .|+..
T Consensus       111 ~H~~g  115 (127)
T 1zu1_A          111 SHYIG  115 (127)
T ss_dssp             HHHTS
T ss_pred             HHHCC
Confidence            99753

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.16  E-value=0.017  Score=44.63  Aligned_cols=140  Identities=15%  Similarity=0.225  Sum_probs=85.8

Q ss_pred             cCcccCccccccccccchHHHHHhhhcCCCCCCcccccccchhhccCHHHHHHHHHhhhCCCCcCCCCCCccccchh---
Q psy1798         172 EDVRHCVHCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYITRQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKW---  248 (353)
Q Consensus       172 ~~~~~c~~c~~~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~---  248 (353)
                      +..+.|++|...+..                   |..+ .||-.|=. .-+...+...    ...||.|...+....   
T Consensus        16 ~~~~~C~IC~~~~~~-------------------pv~~-~CgH~fC~-~Ci~~~~~~~----~~~CP~Cr~~~~~~~~~~   70 (170)
T 3hcs_A           16 ESKYECPICLMALRE-------------------AVQT-PCGHRFCK-ACIIKSIRDA----GHKCPVDNEILLENQLFP   70 (170)
T ss_dssp             CGGGBCTTTCSBCSS-------------------EEEC-TTSCEEEH-HHHHHHHHHH----CSBCTTTCCBCCGGGCEE
T ss_pred             CCCCCCCCCChhhcC-------------------cEEC-CCCCHHHH-HHHHHHHHhC----CCCCCCCccCcchhhhhh
Confidence            456788888877654                   2332 35555532 2333333221    237888877765531   


Q ss_pred             --HH---HHhhhhcc--ccCCCCcCCCCccccccccccccccchhcccCCCcceeeCCCCCCccCCcchHHHHHHHhcCC
Q psy1798         249 --NL---KMHMHFLC--HHCNRFGSRDIGDLIEHSTQCSVMGIAYLNDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGE  321 (353)
Q Consensus       249 --~l---~~H~~~~C--~~C~~~~~~~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (353)
                        .+   ..-+...|  ..|+...  ....+..|...|.            -.+..|+.|+..+ ....|..|+...-..
T Consensus        71 ~~~~~~~i~~l~v~C~n~GC~~~~--~~~~l~~H~~~C~------------~~~v~C~~C~~~~-~r~~l~~H~~~~C~~  135 (170)
T 3hcs_A           71 DNFAKREILSLMVKCPNEGCLHKM--ELRHLEDHQAHCE------------FALMDCPQCQRPF-QKFHINIHILKDCPR  135 (170)
T ss_dssp             CHHHHHHHHTSEEECCSTTCCCEE--EGGGHHHHHTTCT------------TSEEECTTTCCEE-EGGGHHHHHHHTCTT
T ss_pred             hHHHHHHHhhcccCCCCCCCCcee--cHhHHHHHHhcCC------------ceeeECCCCChHH-HHHHHHHHhhhhCCC
Confidence              11   12234566  4565543  3445555544322            2457899999998 566789999888888


Q ss_pred             CCccCCCCcccccCchHHHHHHhhhcCCCCC
Q psy1798         322 KPYECNLCDYKATQNSSIHFHMKLKHNMPFI  352 (353)
Q Consensus       322 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~  352 (353)
                      ++-.|+.|+..+. ...|..|...+.|..++
T Consensus       136 r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          136 RQVSCDNCAASMA-FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             CEEECTTTCCEEE-GGGHHHHHTTCCC----
T ss_pred             CCeECCCCCCccC-HHHHHhHHHhCcChhhh
Confidence            8899999998764 57789999988887654

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.11  E-value=0.0011  Score=47.58  Aligned_cols=30  Identities=23%  Similarity=0.402  Sum_probs=23.8

Q ss_pred             cCCCcceeeCCCCCCccCCcchHHHHHHHh
Q psy1798         289 DRRNVIMYRCFVCPYLSRHKGDVKKHVRKH  318 (353)
Q Consensus       289 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  318 (353)
                      .++++++|.|..|++.|.+...|..|+++.
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            377788888888888888888888887755

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.68  E-value=0.009  Score=34.03  Aligned_cols=24  Identities=17%  Similarity=0.088  Sum_probs=17.2

Q ss_pred             CceeecCCCCCccCchhhhhhHhh
Q psy1798          12 VIMYRCFVCPYLSRHKGDVKKHVR   35 (353)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~~   35 (353)
                      ...|.|+.|+..|.....|+.||+
T Consensus        10 ~~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           10 GGRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SSCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CCceeCCcccccccchHHHHhhhh
Confidence            356777777777777777777776

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.51  E-value=0.017  Score=42.05  Aligned_cols=24  Identities=17%  Similarity=0.303  Sum_probs=20.7

Q ss_pred             CCCCcCCCCCCccccchhHHHHhh
Q psy1798         231 GRRPFPCDMCEYSAAQKWNLKMHM  254 (353)
Q Consensus       231 ~~~~~~C~~C~~~f~~~~~l~~H~  254 (353)
                      +.+.|.|..|+..|.+...+..|+
T Consensus        90 ~~~~~~C~~C~~~f~s~~~~~~H~  113 (127)
T 1zu1_A           90 EDRSKCCPVCNMTFSSPVVAESHY  113 (127)
T ss_dssp             CCTTTEETTTTEECSSHHHHHHHH
T ss_pred             CCCCeEcCCCCCEeCCHHHHHHHH
Confidence            456788999999999999999997

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.43  E-value=0.003  Score=45.27  Aligned_cols=33  Identities=15%  Similarity=0.243  Sum_probs=29.2

Q ss_pred             HHHHhcCCCCccCCCCcccccCchHHHHHHhhh
Q psy1798         314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKLK  346 (353)
Q Consensus       314 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  346 (353)
                      +..-|++++||.|..|++.|.+...|..|++..
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            456789999999999999999999999997654

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.36  E-value=0.042  Score=42.31  Aligned_cols=95  Identities=23%  Similarity=0.324  Sum_probs=59.3

Q ss_pred             cCCCCCccccChH-----HHHHHHHHhcCCccccCcccCc--cccccccccchHHHHHhhhcCCCCCCcccccccchhhc
Q psy1798         144 ACTECGYASILST-----DLRKHIERIHMPQFVEDVRHCV--HCNKEMHNLDESFLLKHCKYCPSLRTVGFQCYLCLYIT  216 (353)
Q Consensus       144 ~C~~C~~~f~~~~-----~l~~H~~~~H~~~~~~~~~~c~--~c~~~~~~~~~~~l~~h~~~~~~~~~~~~~C~~C~~~f  216 (353)
                      .||.|...+....     .+..-+.        .-...|+  .|+..+.   ...+..|...-.   -.+..|+.|+..+
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~--------~l~v~C~n~GC~~~~~---~~~l~~H~~~C~---~~~v~C~~C~~~~  120 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREIL--------SLMVKCPNEGCLHKME---LRHLEDHQAHCE---FALMDCPQCQRPF  120 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHH--------TSEEECCSTTCCCEEE---GGGHHHHHTTCT---TSEEECTTTCCEE
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHh--------hcccCCCCCCCCceec---HhHHHHHHhcCC---ceeeECCCCChHH
Confidence            7888877665431     1222211        2344553  4555443   556667765433   3457788888877


Q ss_pred             cCHHHHHHHHHhhhCCCCcCCCCCCccccchhHHHHhh
Q psy1798         217 RQSAHMRQHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM  254 (353)
Q Consensus       217 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  254 (353)
                       ....|..|+...-..++..|+.|+..+.. ..|..|.
T Consensus       121 -~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~  156 (170)
T 3hcs_A          121 -QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHD  156 (170)
T ss_dssp             -EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHH
T ss_pred             -HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHH
Confidence             45568888877777788888888887755 4567775

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.13  E-value=0.057  Score=28.74  Aligned_cols=22  Identities=18%  Similarity=0.297  Sum_probs=15.2

Q ss_pred             eeCCCCCCccCCcchHHHHHHH
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVRK  317 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~  317 (353)
                      |.|++|.+.|.+...|..|...
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~   27 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEA   27 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHH
T ss_pred             cCCcHHHHHcCCHHHHHHHHHh
Confidence            6777777777777777777653

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.09  E-value=0.078  Score=28.21  Aligned_cols=28  Identities=14%  Similarity=0.287  Sum_probs=23.8

Q ss_pred             CccCCCCcccccCchHHHHHHhhhcCCC
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKLKHNMP  350 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  350 (353)
                      .|.|++|.+.|.+...|..|....|...
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            0469999999999999999998888653

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=89.56  E-value=0.13  Score=34.03  Aligned_cols=21  Identities=24%  Similarity=0.543  Sum_probs=10.0

Q ss_pred             eeCCCCCCccCCcchHHHHHHHhc
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVRKHT  319 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h~  319 (353)
                      -.|-+||+.|.   .|.+|+.+++
T Consensus        22 iiClecGK~fK---~LkRHL~~~h   42 (87)
T 2jsp_A           22 IVCLECGGSFK---SLKRHLTTHH   42 (87)
T ss_dssp             EECTBTCCEES---BHHHHHHHTT
T ss_pred             eEecccchhhH---HHHHHHHHcc
Confidence            34555555554   3445555433

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=88.65  E-value=0.33  Score=27.55  Aligned_cols=34  Identities=26%  Similarity=0.389  Sum_probs=21.2

Q ss_pred             ceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCccccc
Q psy1798          13 IMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQ   54 (353)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~   54 (353)
                      ..|+|.-||++|..... ..       .-..+|+.||+.-..
T Consensus         2 ~iY~C~rCg~~fs~~el-~~-------lP~IrCpyCGyrii~   35 (48)
T 4ayb_P            2 AVYRCGKCWKTFTDEQL-KV-------LPGVRCPYCGYKIIF   35 (48)
T ss_dssp             ---CCCCTTTTCCCCCS-CC-------CSSSCCTTTCCSCEE
T ss_pred             cEEEeeccCCCccHHHH-hh-------CCCcccCccCcEEEE
Confidence            35899999999987532 10       112679999987543

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=88.10  E-value=0.28  Score=31.62  Aligned_cols=47  Identities=21%  Similarity=0.335  Sum_probs=36.7

Q ss_pred             eeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhh
Q psy1798          14 MYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHM   62 (353)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~   62 (353)
                      .|.|..||.++. +..+..|.....+-..|.|-.|++.|.. ..++.|.
T Consensus        10 ~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Ht   56 (79)
T 1wjv_A           10 FFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHV   56 (79)
T ss_dssp             EEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCC
T ss_pred             EEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEe
Confidence            478999998776 4678889776655457999999999985 5566665

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=87.95  E-value=0.33  Score=24.87  Aligned_cols=24  Identities=21%  Similarity=0.498  Sum_probs=13.1

Q ss_pred             CCCCcccccCchHHHHHHhhhcCC
Q psy1798         326 CNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       326 C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      |..|.+.+++-.+|..|++.-|++
T Consensus        12 crfckkkysdvknlikhire~hd~   35 (37)
T 2elu_A           12 CRFCKKKYSDVKNLIKHIRDAHDP   35 (37)
T ss_dssp             ETTTTEECSSHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCC
Confidence            555555555555555555555443

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=87.89  E-value=0.37  Score=25.71  Aligned_cols=25  Identities=24%  Similarity=0.436  Sum_probs=13.5

Q ss_pred             CcCCCCCCccccchhHHHHhhhhcc
Q psy1798         234 PFPCDMCEYSAAQKWNLKMHMHFLC  258 (353)
Q Consensus       234 ~~~C~~C~~~f~~~~~l~~H~~~~C  258 (353)
                      .+.|..|+..|.....+..|..|.|
T Consensus         8 ~~~C~~C~IsF~~l~ty~aHKk~YC   32 (36)
T 1fu9_A            8 KKYCSTCDISFNYVKTYLAHKQFYC   32 (36)
T ss_dssp             CSEETTTTEECSSHHHHHHHHHHTS
T ss_pred             cCeeccccceehhhHHHhhhheecC
Confidence            4455555555555555555554444

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=86.92  E-value=0.5  Score=27.11  Aligned_cols=37  Identities=22%  Similarity=0.376  Sum_probs=20.7

Q ss_pred             ceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcc
Q psy1798          13 IMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYK   51 (353)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   51 (353)
                      +.|+|.+||.+|.....-.  .....-...+.|+.|+..
T Consensus         3 ~~y~C~vCGyvyd~~~Gd~--t~f~~lP~dw~CP~Cg~~   39 (46)
T 6rxn_A            3 QKYVCNVCGYEYDPAEHDN--VPFDQLPDDWCCPVCGVS   39 (46)
T ss_dssp             CCEEETTTCCEECGGGGTT--CCGGGSCTTCBCTTTCCB
T ss_pred             CEEECCCCCeEEeCCcCCC--cchhhCCCCCcCcCCCCc
Confidence            3588999998886442211  000111223789998753

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=86.20  E-value=1.7  Score=25.55  Aligned_cols=47  Identities=17%  Similarity=0.395  Sum_probs=37.4

Q ss_pred             eeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcc-cccCchHHHHHHhh
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDY-KATQNSSIHFHMKL  345 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~-~f~~~~~l~~H~~~  345 (353)
                      -.|.+|...-.+...|..|..+-...   .|++|-. .-.+.+.|+.|.+.
T Consensus         4 mvC~~C~~ECET~kEl~~H~~sCp~g---qCPYC~~~~e~tesAlQaHfkv   51 (57)
T 2k9h_A            4 MVCDVCHHECETAKELESHRQSCING---QCPYCMTITEATESALQAHYSI   51 (57)
T ss_dssp             TBCTTTCCBCSSTTTHHHHHHHHTTT---BCTTTCCBCCSSHHHHHHHHTT
T ss_pred             chhhHHHhhhhhHHHHHHHhccCCCC---CCCcccCcCCcCHHHHHHHHHH
Confidence            46999999999999999998877443   4777765 44678899999764

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=84.95  E-value=0.63  Score=23.46  Aligned_cols=21  Identities=24%  Similarity=0.550  Sum_probs=18.7

Q ss_pred             eeCCCCCCccCCcchHHHHHH
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVR  316 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~  316 (353)
                      |.|++|.....+...|..|..
T Consensus         4 ~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            4 FCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             EECTTSSCEESSHHHHHHHHH
T ss_pred             ccCccccccCcChHHHHHHHH
Confidence            789999999999999998864

>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}

Probab=84.90  E-value=0.8  Score=28.23  Aligned_cols=38  Identities=16%  Similarity=0.394  Sum_probs=25.1

Q ss_pred             ccCCCCceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccc
Q psy1798           7 NDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQN   55 (353)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~   55 (353)
                      ...+....|.|..|+..+.-.           ...+.+|+.||...-.+
T Consensus        14 ~~~~~~v~Y~C~~Cg~~~~l~-----------~~~~iRC~~CG~RILyK   51 (63)
T 3h0g_L           14 PPRPATMIYLCADCGARNTIQ-----------AKEVIRCRECGHRVMYK   51 (63)
T ss_dssp             -----CCCCBCSSSCCBCCCC-----------SSSCCCCSSSCCCCCBC
T ss_pred             CCCCCCeEEECCCCCCeeecC-----------CCCceECCCCCcEEEEE
Confidence            344446789999999988743           13568899999875544

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=84.65  E-value=1  Score=24.00  Aligned_cols=25  Identities=20%  Similarity=0.270  Sum_probs=19.0

Q ss_pred             CceecCCCCccCCCchhHHHHHhhh
Q psy1798         113 GWFQCFRCRYSNKFRSNFLRHIRTH  137 (353)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h  137 (353)
                      ..+.|..|+..|..-..++.|.+-.
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~Y   31 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHHT
T ss_pred             CcCeeccccceehhhHHHhhhheec
Confidence            3477888888888888888887643

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=84.29  E-value=0.3  Score=31.47  Aligned_cols=53  Identities=19%  Similarity=0.345  Sum_probs=38.9

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHh
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMK  344 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  344 (353)
                      +...-.|.|..||.++..+ .|..|+..-.+-..|-|-.|++.|.. ..++.|..
T Consensus         5 ~~~MV~F~C~~Cgd~lKK~-kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Hts   57 (79)
T 1wjv_A            5 SSGMVFFTCNACGESVKKI-QVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHVK   57 (79)
T ss_dssp             SCCCCEEEESSSCCEEETT-HHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCCC
T ss_pred             CCceeEEEcCCCCCeeecc-cchhHHhhCCCCCcEEecccCCeeCC-CCEeCEee
Confidence            3344569999999887654 67889876655557899999999985 45666643

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=82.59  E-value=0.89  Score=23.28  Aligned_cols=24  Identities=29%  Similarity=0.351  Sum_probs=15.7

Q ss_pred             cCCCCCccccChHHHHHHHHHhcC
Q psy1798         144 ACTECGYASILSTDLRKHIERIHM  167 (353)
Q Consensus       144 ~C~~C~~~f~~~~~l~~H~~~~H~  167 (353)
                      .|..|.+.++.-.+|..|++..|-
T Consensus        11 hcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC
Confidence            466677777777777777666553

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=81.64  E-value=0.29  Score=31.32  Aligned_cols=43  Identities=14%  Similarity=0.310  Sum_probs=26.7

Q ss_pred             ceeecCCCCCccCchhhhhhHhhhhc---------------CCCCcccCCCCcccccc
Q psy1798          13 IMYRCFVCPYLSRHKGDVKKHVRKHT---------------GEKPYECNLCDYKATQN   55 (353)
Q Consensus        13 ~~~~C~~C~~~f~~~~~l~~H~~~h~---------------~~~~~~C~~C~~~~~~~   55 (353)
                      .+-+|++||.......-+.+-+..-.               .+-.|+||.||..|-.+
T Consensus         7 ~~~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEFyG~   64 (95)
T 2k5c_A            7 HMAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEFYGK   64 (95)
T ss_dssp             -CEECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEEETT
T ss_pred             ccccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHHhcc
Confidence            45689999998876554433222211               12458899999887554

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=81.34  E-value=5  Score=23.54  Aligned_cols=46  Identities=15%  Similarity=0.254  Sum_probs=36.8

Q ss_pred             ceecCCCCccCCCchhHHHHHhhhcCCCCccCCCCCc-cccChHHHHHHH
Q psy1798         114 WFQCFRCRYSNKFRSNFLRHIRTHTGHKPYACTECGY-ASILSTDLRKHI  162 (353)
Q Consensus       114 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~-~f~~~~~l~~H~  162 (353)
                      .+.|++|.....+...|..|...-..   -+||.|-. .-.+.+.|+.|+
T Consensus         3 smvC~~C~~ECET~kEl~~H~~sCp~---gqCPYC~~~~e~tesAlQaHf   49 (57)
T 2k9h_A            3 SMVCDVCHHECETAKELESHRQSCIN---GQCPYCMTITEATESALQAHY   49 (57)
T ss_dssp             TTBCTTTCCBCSSTTTHHHHHHHHTT---TBCTTTCCBCCSSHHHHHHHH
T ss_pred             cchhhHHHhhhhhHHHHHHHhccCCC---CCCCcccCcCCcCHHHHHHHH
Confidence            47899999999999999999987653   37888864 446778888884

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=80.95  E-value=0.91  Score=31.13  Aligned_cols=31  Identities=16%  Similarity=0.376  Sum_probs=22.9

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccC
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQ  335 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  335 (353)
                      .||+|..||+.|.           -...+|-.|+.|+.....
T Consensus        66 ~p~~C~~CG~~F~-----------~~~~kPsrCP~CkSe~Ie   96 (105)
T 2gmg_A           66 KPAQCRKCGFVFK-----------AEINIPSRCPKCKSEWIE   96 (105)
T ss_dssp             CCCBBTTTCCBCC-----------CCSSCCSSCSSSCCCCBC
T ss_pred             ECcChhhCcCeec-----------ccCCCCCCCcCCCCCccC
Confidence            5799999999992           112477899999876543

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=80.48  E-value=0.7  Score=30.52  Aligned_cols=23  Identities=26%  Similarity=0.426  Sum_probs=20.1

Q ss_pred             CCCCcccccCchHHHHHHhhhcCCCC
Q psy1798         326 CNLCDYKATQNSSIHFHMKLKHNMPF  351 (353)
Q Consensus       326 C~~C~~~f~~~~~l~~H~~~~h~~~~  351 (353)
                      |-.||+.|.   .|.+|+.++||+.|
T Consensus        24 ClecGK~fK---~LkRHL~~~hgltp   46 (87)
T 2jsp_A           24 CLECGGSFK---SLKRHLTTHHSMTP   46 (87)
T ss_dssp             CTBTCCEES---BHHHHHHHTTCSCH
T ss_pred             ecccchhhH---HHHHHHHHccCCCH
Confidence            888999998   58899999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	353
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	6e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	8e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	5e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	4e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	7e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	9e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	7e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.002
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.001

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (104), Expect = 4e-07
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIH 166
           RTH+G KPY C  C      S  ++ HI + H
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (94), Expect = 9e-06
 Identities = 15/32 (46%), Positives = 22/32 (68%)

Query: 316 RKHTGEKPYECNLCDYKATQNSSIHFHMKLKH 347
           R H+GEKPYEC +C  + TQ+ ++  H+  KH
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 5e-05
 Identities = 13/29 (44%), Positives = 20/29 (68%)

Query: 35 RKHTGEKPYECNLCDYKATQNSSIHFHMK 63
          R H+GEKPYEC +C  + TQ+ ++  H+ 
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMKMHIL 29

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (83), Expect = 2e-04
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 227 RKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           R H+G +P+ C +C     Q   +KMH+
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHI 28

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 1e-05
 Identities = 16/36 (44%), Positives = 19/36 (52%)

Query: 316 RKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMPF 351
           R HTGEKPY C+ CD    Q   +  H K  H+  F
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF 36

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 6e-05
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)

Query: 135 RTHTGHKPYACTECGYASILSTDLRKHIERIH 166
           RTHTG KPYAC+ C         L  H  + +
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMH-FKRY 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 8e-05
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query: 35 RKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
          R HTGEKPY C+ CD    Q   +  H K 
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMHFKR 30

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 0.001
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 227 RKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           R HTG +P+ C  C+ +  QK  L MH 
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHF 28

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.9 bits (91), Expect = 2e-05
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 133 HIRTHTGHKPYACTECGYASILSTDLRKHIERIHM 167
             R  TG KP+ C +C  +   S  L  H  + HM
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALH-RKRHM 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.8 bits (88), Expect = 6e-05
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 33 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
            R  TG KP++C  CD   +++  +  H K 
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR 33

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.0 bits (86), Expect = 8e-05
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
             R  TG KP++C  CD   +++  +  H K
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.1 bits (81), Expect = 5e-04
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 225 HLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
             R  TG +PF C  C+ S ++  +L +H 
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHR 31

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (89), Expect = 4e-05
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 132 RHIRTHTGHKPYACTECGYASILSTDLRKHIERIH 166
           R        + Y C ECG +   S+DL KH  R H
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTH 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (87), Expect = 7e-05
 Identities = 5/33 (15%), Positives = 14/33 (42%)

Query: 32 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV 64
          +   +    + Y+C+ C    + +S +  H + 
Sbjct: 2  RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRT 34

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (86), Expect = 9e-05
 Identities = 5/32 (15%), Positives = 14/32 (43%)

Query: 313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMK 344
           +   +    + Y+C+ C    + +S +  H +
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRR 33

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (83), Expect = 2e-04
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 224 QHLRKHTGRRPFPCDMCEYSAAQKWNLKMHM 254
           +   +   RR + CD C  S +   +L  H 
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHR 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (88), Expect = 5e-05
 Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 137 HTGHKPYACTECGYASILSTDLRKHIERIH 166
           H+G KPY C ECG A   S+ L +H +R+H
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQH-QRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (88), Expect = 5e-05
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 37 HTGEKPYECNLCDYKATQNSSIHFHMKV 64
          H+GEKPY C  C    +++S +  H +V
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQHQRV 29

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (87), Expect = 7e-05
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 318 HTGEKPYECNLCDYKATQNSSIHFHMK 344
           H+GEKPY C  C    +++S +  H +
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQR 28

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 7/26 (26%), Positives = 13/26 (50%)

Query: 229 HTGRRPFPCDMCEYSAAQKWNLKMHM 254
           H+G +P+ C  C  + ++   L  H 
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQ 27

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (85), Expect = 1e-04
 Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 15 YRCFVCPYLSRHKGDVKKHVRK-HTGEKPYECNL 47
          Y C  C         +  H+++ HT E+P++C +
Sbjct: 6  YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (85), Expect = 1e-04
 Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 296 YRCFVCPYLSRHKGDVKKHVRK-HTGEKPYECNL 328
           Y C  C         +  H+++ HT E+P++C +
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 4e-04
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 138 TGHKPYACTECGYASILSTDLRKHIERIH 166
           +  KPY C  CG        L  HI+++H
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVH 29

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 8/32 (25%), Positives = 13/32 (40%), Gaps = 1/32 (3%)

Query: 115 FQCFRCRYSNKFRSNFLRHIR-THTGHKPYAC 145
           + C  C        +   HI+  HT  +P+ C
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.0 bits (78), Expect = 0.001
 Identities = 7/30 (23%), Positives = 14/30 (46%), Gaps = 1/30 (3%)

Query: 137 HTGHKPYACTECGYASILSTDLRKHIERIH 166
            +G +P+ C  C  A     +  +H  ++H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARH-LKVH 30

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	353
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.67
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.5
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.26
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.24
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.23
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.22
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.19
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.08
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.08
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.06
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.04
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.04
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.03
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.02
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.01
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.97
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.95
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.93
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.93
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.93
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.92
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.9
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.89
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.88
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.79
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.77
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.76
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.7
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.69
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.66
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.66
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.63
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.61
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.5
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.46
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.43
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.38
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.33
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.32
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.28
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.25
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.19
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.17
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.17
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.05
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.03
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.01
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.95
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.92
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.91
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.86
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.86
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.85
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.79
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.78
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.76
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.72
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.64
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.63
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.62
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.61
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.61
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.49
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.47
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.45
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.43
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.36
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.32
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.27
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.2
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.19
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.16
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.12
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.06
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.89
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.88
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.76
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.71
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.64
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.55
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.51
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.41
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.38
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.18
d1y0jb1	36	U-shaped transcription factor, different fingers {	96.14
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.1
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.87
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.74
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.65
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.58
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.54
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.49
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.46
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.45
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.41
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.6
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.2
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	94.04
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.25
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.14
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.12
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.9
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.62
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.36
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.63
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	91.24
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.08
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.92
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.18
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.17
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	89.16
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	88.95
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.84
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.29
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.94
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	87.47
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	86.95
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	85.6
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	85.55
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	84.46
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	83.86
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	82.85
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	82.83
d6rxna_	45	Rubredoxin {Desulfovibrio desulfuricans, strain 27	81.74

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.7e-17  Score=101.26  Aligned_cols=53  Identities=30%  Similarity=0.610  Sum_probs=50.9

Q ss_pred             cceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCcccccCchHHHHHHhhh
Q psy1798         293 VIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLK  346 (353)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~  346 (353)
                      ++||+| .||++|.....|..|+++|++++||.|++||++|.+.+.|..||++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            578999 59999999999999999999999999999999999999999999886

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=5.4e-15  Score=89.90  Aligned_cols=52  Identities=31%  Similarity=0.620  Sum_probs=49.9

Q ss_pred             CceeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcccccchhhhhhhhc
Q psy1798          12 VIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYKATQNSSIHFHMKV   64 (353)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~~~~~~~l~~H~~~   64 (353)
                      +++|+| .||+.|.....|..|+++|++++||.|++|++.|.....|..||+.
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhc
Confidence            478999 5999999999999999999999999999999999999999999976

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.9e-12  Score=71.25  Aligned_cols=37  Identities=24%  Similarity=0.466  Sum_probs=33.0

Q ss_pred             CcceeeCCCCCCccCCcchHHHHHH-HhcCCCCccCCC
Q psy1798         292 NVIMYRCFVCPYLSRHKGDVKKHVR-KHTGEKPYECNL  328 (353)
Q Consensus       292 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~  328 (353)
                      .++||+|.+||++|.....|..|++ +|++++||.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4688999999999999999999986 799999999975

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.4e-12  Score=70.97  Aligned_cols=35  Identities=43%  Similarity=0.782  Sum_probs=28.8

Q ss_pred             HHhcCCCCccCCCCcccccCchHHHHHHhhhcCCC
Q psy1798         316 RKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMP  350 (353)
Q Consensus       316 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  350 (353)
                      ++|++++||.|.+||++|...+.|..|+++|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            46888888888888888888888888888888765

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=4.3e-13  Score=74.12  Aligned_cols=37  Identities=14%  Similarity=0.363  Sum_probs=30.0

Q ss_pred             HHHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         313 KHVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       313 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      +|+++|++++||.|++||++|...++|..|+++|+|+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4677788888888888888888888888888888774

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.4e-12  Score=67.89  Aligned_cols=33  Identities=30%  Similarity=0.580  Sum_probs=24.7

Q ss_pred             HhcCCCCccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         317 KHTGEKPYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       317 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      +|++++||.|+.||++|...+.|..|+++|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            467777777777777777777777777777764

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=1.9e-12  Score=70.95  Aligned_cols=36  Identities=28%  Similarity=0.532  Sum_probs=27.1

Q ss_pred             HHHHhcCCCCccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         314 HVRKHTGEKPYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       314 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      |.++|++++||.|+.|+++|+...+|..|+++|-++
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~v   37 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcCC
Confidence            456777788888888888888888888887777653

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=1.5e-11  Score=66.56  Aligned_cols=34  Identities=41%  Similarity=0.855  Sum_probs=24.7

Q ss_pred             HhcCCCCccCCCCcccccCchHHHHHHhhhcCCC
Q psy1798         317 KHTGEKPYECNLCDYKATQNSSIHFHMKLKHNMP  350 (353)
Q Consensus       317 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  350 (353)
                      +|++++||.|++|++.|....+|.+|++.+|+..
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            5777777777777777777777777777666543

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=2.6e-11  Score=64.80  Aligned_cols=31  Identities=23%  Similarity=0.609  Sum_probs=17.5

Q ss_pred             hcCCCCccCCCCcccccCchHHHHHHhhhcC
Q psy1798         318 HTGEKPYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       318 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      |+|++||.|.+|++.|+...+|.+|+++|++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            3455555555555555555555555555544

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=4.2e-11  Score=63.05  Aligned_cols=32  Identities=28%  Similarity=0.414  Sum_probs=30.8

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGE  321 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (353)
                      |++++||+|.+||++|...+.|..|+++|++|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            78999999999999999999999999999985

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=3.7e-11  Score=60.57  Aligned_cols=28  Identities=18%  Similarity=0.645  Sum_probs=17.3

Q ss_pred             CCCccCCCCcccccCchHHHHHHhhhcC
Q psy1798         321 EKPYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       321 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      |+||.|++|+++|...++|.+||++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4566666666666666666666666654

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=6.5e-11  Score=64.96  Aligned_cols=36  Identities=25%  Similarity=0.547  Sum_probs=33.5

Q ss_pred             CcccccccchhhccCHHHHHHHHH-hhhCCCCcCCCC
Q psy1798         204 TVGFQCYLCLYITRQSAHMRQHLR-KHTGRRPFPCDM  239 (353)
Q Consensus       204 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~  239 (353)
                      ++||+|..|++.|...++|..|++ +|++++||.|.+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            689999999999999999999976 799999999974

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.03  E-value=6.5e-11  Score=60.47  Aligned_cols=29  Identities=14%  Similarity=0.442  Sum_probs=18.5

Q ss_pred             CCccCCCCcccccCchHHHHHHhhhcCCC
Q psy1798         322 KPYECNLCDYKATQNSSIHFHMKLKHNMP  350 (353)
Q Consensus       322 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  350 (353)
                      +||.|++||++|+..+.|.+|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            46666666666666666666666666653

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=6.3e-11  Score=65.20  Aligned_cols=32  Identities=41%  Similarity=0.658  Sum_probs=31.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGE  321 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (353)
                      |++++||+|.+||++|...+.|..|+++|++|
T Consensus         7 Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           7 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            99999999999999999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=1.1e-10  Score=59.44  Aligned_cols=29  Identities=21%  Similarity=0.461  Sum_probs=18.8

Q ss_pred             CCccCCCCcccccCchHHHHHHhhhcCCC
Q psy1798         322 KPYECNLCDYKATQNSSIHFHMKLKHNMP  350 (353)
Q Consensus       322 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  350 (353)
                      +||.|++||++|...+.|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46666666666666666666666666653

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.97  E-value=1.5e-10  Score=61.73  Aligned_cols=33  Identities=18%  Similarity=0.347  Sum_probs=30.8

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      +++++||+|.+|++.|.++..|..|+++|++..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            789999999999999999999999999998753

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.95  E-value=1.8e-10  Score=58.78  Aligned_cols=29  Identities=34%  Similarity=0.579  Sum_probs=27.5

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhcCCC
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      +||+|.+|+++|...+.|..|+++|++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            58999999999999999999999999985

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=2.2e-10  Score=57.67  Aligned_cols=28  Identities=25%  Similarity=0.542  Sum_probs=26.6

Q ss_pred             cceeeCCCCCCccCCcchHHHHHHHhcC
Q psy1798         293 VIMYRCFVCPYLSRHKGDVKKHVRKHTG  320 (353)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  320 (353)
                      ++||+|.+|+++|..++.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5899999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=3.1e-10  Score=61.91  Aligned_cols=31  Identities=13%  Similarity=0.268  Sum_probs=29.8

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTG  320 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  320 (353)
                      |++++||+|.+|+++|.+++.|..|+++|.+
T Consensus         6 HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           6 STGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             TCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             cCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            9999999999999999999999999999965

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.9e-10  Score=61.56  Aligned_cols=33  Identities=18%  Similarity=0.277  Sum_probs=31.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      |++++||+|.+||++|..++.|..|+++|+++.
T Consensus         3 HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            899999999999999999999999999998753

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=3.5e-10  Score=57.52  Aligned_cols=29  Identities=24%  Similarity=0.531  Sum_probs=27.5

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhcCCC
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      +||.|.+|+++|..++.|..|+++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58999999999999999999999999975

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=4.8e-10  Score=60.33  Aligned_cols=33  Identities=24%  Similarity=0.603  Sum_probs=29.6

Q ss_pred             eeCCC--CCCccCCcchHHHHHHHhcCCCCccCCC
Q psy1798         296 YRCFV--CPYLSRHKGDVKKHVRKHTGEKPYECNL  328 (353)
Q Consensus       296 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~  328 (353)
                      |.|..  |+++|..+..|.+|+++|++++||.|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            77876  9999999999999999999999999963

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=2.6e-10  Score=55.77  Aligned_cols=25  Identities=36%  Similarity=0.687  Sum_probs=15.1

Q ss_pred             CCccCCCCcccccCchHHHHHHhhh
Q psy1798         322 KPYECNLCDYKATQNSSIHFHMKLK  346 (353)
Q Consensus       322 ~~~~C~~C~~~f~~~~~l~~H~~~~  346 (353)
                      +||+|+.||++|...+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            4566666666666666666666655

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.88  E-value=5.6e-11  Score=68.51  Aligned_cols=39  Identities=23%  Similarity=0.419  Sum_probs=22.2

Q ss_pred             HHHHHHHhcCCCCccCCC--CcccccCchHHHHHHhhhcCCC
Q psy1798         311 VKKHVRKHTGEKPYECNL--CDYKATQNSSIHFHMKLKHNMP  350 (353)
Q Consensus       311 l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~  350 (353)
                      |..|+ .|++++||.|.+  |+++|...++|..|+++|+|++
T Consensus         7 l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            33444 355666666655  6666666666666666666543

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.1e-09  Score=53.51  Aligned_cols=26  Identities=27%  Similarity=0.511  Sum_probs=24.7

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhc
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHT  319 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~  319 (353)
                      +||+|.+||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            58999999999999999999999985

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=2.1e-09  Score=57.99  Aligned_cols=32  Identities=22%  Similarity=0.499  Sum_probs=29.0

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCC
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGE  321 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (353)
                      |++++||+|.+|+++|..+..|..|++.++++
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            89999999999999999999999998765543

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=2.6e-09  Score=57.40  Aligned_cols=32  Identities=25%  Similarity=0.645  Sum_probs=30.0

Q ss_pred             ccccc--chhhccCHHHHHHHHHhhhCCCCcCCC
Q psy1798         207 FQCYL--CLYITRQSAHMRQHLRKHTGRRPFPCD  238 (353)
Q Consensus       207 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  238 (353)
                      |.|+.  |++.|.+++.|.+|+++|++++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67876  999999999999999999999999997

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=4.7e-09  Score=53.62  Aligned_cols=27  Identities=19%  Similarity=0.534  Sum_probs=15.6

Q ss_pred             CCccCCC--CcccccCchHHHHHHhhhcC
Q psy1798         322 KPYECNL--CDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       322 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~  348 (353)
                      +||.|++  |+++|...+.|.+|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            3555555  55555555555555555555

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.69  E-value=6.2e-09  Score=59.76  Aligned_cols=33  Identities=12%  Similarity=0.474  Sum_probs=31.3

Q ss_pred             CCCcceeeCCC--CCCccCCcchHHHHHHHhcCCC
Q psy1798         290 RRNVIMYRCFV--CPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       290 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      +++++||+|..  |+++|...+.|..|+++|++++
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            88999999987  9999999999999999999975

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=4.4e-09  Score=53.85  Aligned_cols=26  Identities=15%  Similarity=0.686  Sum_probs=13.4

Q ss_pred             CccCCC--CcccccCchHHHHHHhhhcC
Q psy1798         323 PYECNL--CDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       323 ~~~C~~--C~~~f~~~~~l~~H~~~~h~  348 (353)
                      ||.|++  ||++|+..+.|.+|+++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCC
Confidence            455544  55555555555555555544

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=6.9e-09  Score=53.59  Aligned_cols=29  Identities=17%  Similarity=0.527  Sum_probs=19.4

Q ss_pred             CCccCC--CCcccccCchHHHHHHhhhcCCC
Q psy1798         322 KPYECN--LCDYKATQNSSIHFHMKLKHNMP  350 (353)
Q Consensus       322 ~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~  350 (353)
                      +||.|+  .||++|+..++|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            466774  47777777777777777776654

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=9.4e-09  Score=52.46  Aligned_cols=28  Identities=32%  Similarity=0.548  Sum_probs=26.4

Q ss_pred             ceeeCCC--CCCccCCcchHHHHHHHhcCC
Q psy1798         294 IMYRCFV--CPYLSRHKGDVKKHVRKHTGE  321 (353)
Q Consensus       294 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  321 (353)
                      +||+|..  |+++|.+++.|..|+++|++|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5899988  999999999999999999985

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1.1e-08  Score=52.39  Aligned_cols=28  Identities=29%  Similarity=0.526  Sum_probs=26.2

Q ss_pred             ceeeCCC--CCCccCCcchHHHHHHHhcCC
Q psy1798         294 IMYRCFV--CPYLSRHKGDVKKHVRKHTGE  321 (353)
Q Consensus       294 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  321 (353)
                      +||+|..  |+++|+++..|..|+++|++|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5899987  999999999999999999985

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.50  E-value=4.9e-08  Score=50.54  Aligned_cols=29  Identities=28%  Similarity=0.623  Sum_probs=19.2

Q ss_pred             CCCccCCC--CcccccCchHHHHHHhhhcCC
Q psy1798         321 EKPYECNL--CDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       321 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      ++||.|.+  |+++|+...+|.+|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            46677766  777777777777777666543

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=3.7e-08  Score=50.78  Aligned_cols=29  Identities=31%  Similarity=0.574  Sum_probs=26.5

Q ss_pred             ceeeCC--CCCCccCCcchHHHHHHHhcCCC
Q psy1798         294 IMYRCF--VCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       294 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      +||.|+  .|+++|...+.|..|+++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            579995  69999999999999999999975

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.43  E-value=3.2e-08  Score=49.94  Aligned_cols=27  Identities=22%  Similarity=0.800  Sum_probs=14.5

Q ss_pred             CCccCCC--CcccccCchHHHHHHhhhcC
Q psy1798         322 KPYECNL--CDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       322 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~  348 (353)
                      +||.|.+  |+++|+..++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3555544  55555555555555555543

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=6.8e-08  Score=48.10  Aligned_cols=25  Identities=28%  Similarity=0.723  Sum_probs=14.4

Q ss_pred             CCccCCC--CcccccCchHHHHHHhhh
Q psy1798         322 KPYECNL--CDYKATQNSSIHFHMKLK  346 (353)
Q Consensus       322 ~~~~C~~--C~~~f~~~~~l~~H~~~~  346 (353)
                      +||.|+.  ||++|+..++|.+|+++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            3555544  666666666666665555

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.33  E-value=9.2e-08  Score=48.22  Aligned_cols=27  Identities=37%  Similarity=0.674  Sum_probs=25.1

Q ss_pred             ceeeCCC--CCCccCCcchHHHHHHHhcC
Q psy1798         294 IMYRCFV--CPYLSRHKGDVKKHVRKHTG  320 (353)
Q Consensus       294 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  320 (353)
                      +||+|..  |+++|.+.+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5899988  99999999999999999975

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.32  E-value=1.7e-07  Score=48.47  Aligned_cols=29  Identities=21%  Similarity=0.325  Sum_probs=26.5

Q ss_pred             cceeeCCC--CCCccCCcchHHHHHHHhcCC
Q psy1798         293 VIMYRCFV--CPYLSRHKGDVKKHVRKHTGE  321 (353)
Q Consensus       293 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  321 (353)
                      ++||.|..  |+++|+....|.+|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            57899988  999999999999999999753

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1.8e-07  Score=45.31  Aligned_cols=27  Identities=44%  Similarity=0.791  Sum_probs=22.7

Q ss_pred             CCccCCC--CcccccCchHHHHHHhhhcC
Q psy1798         322 KPYECNL--CDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       322 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~  348 (353)
                      +||.|.+  |++++++++.|+.|++++||
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5788866  88888889999999888876

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=2.2e-07  Score=46.21  Aligned_cols=26  Identities=23%  Similarity=0.423  Sum_probs=24.2

Q ss_pred             ceeeCCC--CCCccCCcchHHHHHHHhc
Q psy1798         294 IMYRCFV--CPYLSRHKGDVKKHVRKHT  319 (353)
Q Consensus       294 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  319 (353)
                      +||.|..  ||++|++...|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5899988  9999999999999999985

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=3.9e-07  Score=42.97  Aligned_cols=28  Identities=25%  Similarity=0.845  Sum_probs=19.8

Q ss_pred             CCCccCCCCcccccCchHHHHHHhhhcC
Q psy1798         321 EKPYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       321 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      ++||+|.+|.+...+.++|..|++.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            4677777777777777777777777765

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=3.8e-07  Score=44.07  Aligned_cols=29  Identities=34%  Similarity=0.576  Sum_probs=25.8

Q ss_pred             cceeeCCCCCCccCCcchHHHHHHHhcCC
Q psy1798         293 VIMYRCFVCPYLSRHKGDVKKHVRKHTGE  321 (353)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (353)
                      ++||.|++|++.|..+..|.-|+++|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            47899999999999999999999999763

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=5.1e-07  Score=41.47  Aligned_cols=26  Identities=19%  Similarity=0.552  Sum_probs=15.9

Q ss_pred             CccCCCCcccccCchHHHHHHhhhcC
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      |.+|.+|++.|+-+..|..||+.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            34566666666666666666666554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.05  E-value=1e-06  Score=41.92  Aligned_cols=27  Identities=19%  Similarity=0.365  Sum_probs=18.4

Q ss_pred             cceeeCCCCCCccCCcchHHHHHHHhc
Q psy1798         293 VIMYRCFVCPYLSRHKGDVKKHVRKHT  319 (353)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  319 (353)
                      ++||.|.+||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            356777777777777777777766663

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=9.3e-07  Score=41.67  Aligned_cols=29  Identities=38%  Similarity=0.906  Sum_probs=26.8

Q ss_pred             cceeeCCCCCCccCCcchHHHHHHHhcCC
Q psy1798         293 VIMYRCFVCPYLSRHKGDVKKHVRKHTGE  321 (353)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (353)
                      ++||+|.+|.+.-.+.+.|..|+++|++.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            47899999999999999999999999873

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=8.7e-07  Score=40.67  Aligned_cols=26  Identities=38%  Similarity=0.597  Sum_probs=23.8

Q ss_pred             eeeCCCCCCccCCcchHHHHHHHhcC
Q psy1798         295 MYRCFVCPYLSRHKGDVKKHVRKHTG  320 (353)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H~~~h~~  320 (353)
                      |.+|.+|++.|+.+..|..|++.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            46899999999999999999999975

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=4.3e-06  Score=39.83  Aligned_cols=29  Identities=31%  Similarity=0.843  Sum_probs=23.3

Q ss_pred             CCccCCCCcccccCchHHHHHHhhhcCCC
Q psy1798         322 KPYECNLCDYKATQNSSIHFHMKLKHNMP  350 (353)
Q Consensus       322 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~  350 (353)
                      +||.|.+|.+...+.++|..|+++.|+..
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            57888888888888888888888887653

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.92  E-value=2.8e-06  Score=40.43  Aligned_cols=27  Identities=30%  Similarity=0.685  Sum_probs=25.1

Q ss_pred             CCCccCCCCcccccCchHHHHHHhhhc
Q psy1798         321 EKPYECNLCDYKATQNSSIHFHMKLKH  347 (353)
Q Consensus       321 ~~~~~C~~C~~~f~~~~~l~~H~~~~h  347 (353)
                      ++||.|.+||+.|.-.....+|.++|-
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999999884

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=4.5e-06  Score=39.59  Aligned_cols=27  Identities=33%  Similarity=0.627  Sum_probs=20.2

Q ss_pred             eeCCCCCCccCCcchHHHHHHHhcCCC
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      |.|+.||......+.|+.|+++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            677777777777777777777777653

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.86  E-value=2.8e-06  Score=38.49  Aligned_cols=24  Identities=29%  Similarity=0.595  Sum_probs=14.6

Q ss_pred             eeCCCCCCccCCcchHHHHHHHhc
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVRKHT  319 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h~  319 (353)
                      |+|..|.++|..+++|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            456666666666666666666553

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=3.5e-06  Score=41.64  Aligned_cols=28  Identities=11%  Similarity=0.140  Sum_probs=15.4

Q ss_pred             cCCCCcccccCchHHHHHHhhhcCCCCC
Q psy1798         325 ECNLCDYKATQNSSIHFHMKLKHNMPFI  352 (353)
Q Consensus       325 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~  352 (353)
                      .|.+||+.|.+...|.+|.-.|.+++||
T Consensus         7 ~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           7 ACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4555555555555555555555555555

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=4.8e-06  Score=38.88  Aligned_cols=25  Identities=32%  Similarity=0.743  Sum_probs=12.8

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHh
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKH  318 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h  318 (353)
                      +||+|..|.++..+.++|..|+++|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            3455555555555555555555544

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=4.7e-06  Score=39.04  Aligned_cols=26  Identities=31%  Similarity=0.428  Sum_probs=18.3

Q ss_pred             eeCCCCCCccCCcchHHHHHHHhcCC
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVRKHTGE  321 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (353)
                      ..|..||++|...+.|.+|+.+|+++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            45777777777777777777777653

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=7.1e-06  Score=38.27  Aligned_cols=28  Identities=39%  Similarity=0.943  Sum_probs=25.0

Q ss_pred             CCCccCCCCcccccCchHHHHHHhhhcC
Q psy1798         321 EKPYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       321 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      .+||+|..|++.-.+.+.|..|+++|.+
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs~   28 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHSD   28 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSCC
T ss_pred             CCCcccccccchhcchhhHhhhhhcccC
Confidence            0589999999999999999999999864

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=7e-06  Score=40.55  Aligned_cols=32  Identities=28%  Similarity=0.633  Sum_probs=29.0

Q ss_pred             cccccccchhhccCHHHHHHHHHhhhCCCCcC
Q psy1798         205 VGFQCYLCLYITRQSAHMRQHLRKHTGRRPFP  236 (353)
Q Consensus       205 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  236 (353)
                      +..-|..||+.|.+...|.+|..+|.+++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            34679999999999999999999999999984

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1.3e-05  Score=38.00  Aligned_cols=27  Identities=22%  Similarity=0.561  Sum_probs=25.6

Q ss_pred             ccCCCCcccccCchHHHHHHhhhcCCC
Q psy1798         324 YECNLCDYKATQNSSIHFHMKLKHNMP  350 (353)
Q Consensus       324 ~~C~~C~~~f~~~~~l~~H~~~~h~~~  350 (353)
                      |.|++||....-++.|..|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            889999999999999999999999875

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=1.7e-05  Score=38.19  Aligned_cols=28  Identities=25%  Similarity=0.489  Sum_probs=23.7

Q ss_pred             CceecCCCCccCCCchhHHHHHhhhcCC
Q psy1798         113 GWFQCFRCRYSNKFRSNFLRHIRTHTGH  140 (353)
Q Consensus       113 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  140 (353)
                      +||.|++|+..|..+..+..|.++|.+.
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCcccchHHHHhhccccceEeeecccCc
Confidence            5788999999999889998898888764

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=1.3e-05  Score=38.11  Aligned_cols=28  Identities=36%  Similarity=0.784  Sum_probs=24.0

Q ss_pred             CCccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         322 KPYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       322 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      +||+|.+|.+-.++.++|..|++..|+.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            5889999999889999999999888763

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.62  E-value=1.9e-05  Score=35.75  Aligned_cols=25  Identities=28%  Similarity=0.731  Sum_probs=22.8

Q ss_pred             ccCCCCcccccCchHHHHHHhhhcC
Q psy1798         324 YECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       324 ~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      |+|.+|..+|..++.|.+|++.|.+
T Consensus         1 ykcglcersfveksalsrhqrvhkn   25 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHKN   25 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhcc
Confidence            7899999999999999999988753

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.61  E-value=2e-05  Score=41.25  Aligned_cols=29  Identities=21%  Similarity=0.402  Sum_probs=24.2

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhcCCC
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHTGEK  322 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  322 (353)
                      +.|+|.+|++.|.+-++|.-|++.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            45889999999999999999998886654

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=1.9e-05  Score=38.12  Aligned_cols=27  Identities=26%  Similarity=0.512  Sum_probs=24.0

Q ss_pred             ceeeCCC--CCCccCCcchHHHHHHHhcC
Q psy1798         294 IMYRCFV--CPYLSRHKGDVKKHVRKHTG  320 (353)
Q Consensus       294 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  320 (353)
                      +||.|.+  |++++++.++|..|++.+++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5799977  99999999999999997664

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=2.3e-05  Score=37.10  Aligned_cols=24  Identities=33%  Similarity=0.838  Sum_probs=20.3

Q ss_pred             CccCCCCcccccCchHHHHHHhhh
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKLK  346 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~~  346 (353)
                      ||.|..|.++|.++.+|..||+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            688888888888888888888764

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.47  E-value=3.6e-05  Score=40.22  Aligned_cols=30  Identities=20%  Similarity=0.369  Sum_probs=24.2

Q ss_pred             CceeecCCCCCccCchhhhhhHhhhhcCCC
Q psy1798          12 VIMYRCFVCPYLSRHKGDVKKHVRKHTGEK   41 (353)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   41 (353)
                      .+.|+|..|++.|.+.+.|-.||+.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            356889999999988889988888886544

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=2.8e-05  Score=40.71  Aligned_cols=26  Identities=46%  Similarity=0.864  Sum_probs=21.5

Q ss_pred             cCCCCccCCCCcccccCchHHHHHHh
Q psy1798         319 TGEKPYECNLCDYKATQNSSIHFHMK  344 (353)
Q Consensus       319 ~~~~~~~C~~C~~~f~~~~~l~~H~~  344 (353)
                      ++.+||.|.+|++.|-++..+.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            36788999999999999888888854

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=2.9e-05  Score=36.29  Aligned_cols=26  Identities=27%  Similarity=0.431  Sum_probs=23.3

Q ss_pred             cccccchhhccCHHHHHHHHHhhhCC
Q psy1798         207 FQCYLCLYITRQSAHMRQHLRKHTGR  232 (353)
Q Consensus       207 ~~C~~C~~~f~~~~~l~~H~~~h~~~  232 (353)
                      ..|..||+.|..++.|++|+.+|+++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46899999999999999999999875

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=5.1e-05  Score=35.89  Aligned_cols=25  Identities=28%  Similarity=0.748  Sum_probs=22.7

Q ss_pred             eeeCCCCCCccCCcchHHHHHHHhc
Q psy1798         295 MYRCFVCPYLSRHKGDVKKHVRKHT  319 (353)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H~~~h~  319 (353)
                      ||.|..|+.+|.++.+|..||++-.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            6999999999999999999998643

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=0.0001  Score=35.01  Aligned_cols=27  Identities=22%  Similarity=0.626  Sum_probs=24.0

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhcC
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHTG  320 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  320 (353)
                      +||+|..|.+...+.++|..|+++-++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            589999999999999999999985543

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.27  E-value=0.00011  Score=34.63  Aligned_cols=27  Identities=15%  Similarity=0.487  Sum_probs=14.8

Q ss_pred             CCccCCCCcccccCchHHHHHHhhhcC
Q psy1798         322 KPYECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       322 ~~~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      +.|.|.+|...|..+..|+.||-.|+|
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccC
Confidence            345555555555555555555555554

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.20  E-value=0.00014  Score=33.42  Aligned_cols=26  Identities=19%  Similarity=0.328  Sum_probs=16.3

Q ss_pred             cCCCCcccccCchHHHHHHhhhcCCC
Q psy1798         325 ECNLCDYKATQNSSIHFHMKLKHNMP  350 (353)
Q Consensus       325 ~C~~C~~~f~~~~~l~~H~~~~h~~~  350 (353)
                      +|+.|.+.|.++.-|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            46666666666666666666666653

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.19  E-value=0.00015  Score=34.17  Aligned_cols=29  Identities=31%  Similarity=0.613  Sum_probs=26.4

Q ss_pred             cceeeCCCCCCccCCcchHHHHHHHhcCC
Q psy1798         293 VIMYRCFVCPYLSRHKGDVKKHVRKHTGE  321 (353)
Q Consensus       293 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  321 (353)
                      +..|.|..|...|...-.|.-|+-+|+++
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            35699999999999999999999999875

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.16  E-value=0.00016  Score=33.22  Aligned_cols=26  Identities=31%  Similarity=0.498  Sum_probs=23.6

Q ss_pred             ccccchhhccCHHHHHHHHHhhhCCC
Q psy1798         208 QCYLCLYITRQSAHMRQHLRKHTGRR  233 (353)
Q Consensus       208 ~C~~C~~~f~~~~~l~~H~~~h~~~~  233 (353)
                      +|+.|.+.|.++.-|..|.+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            68999999999999999999999874

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=9.5e-05  Score=35.95  Aligned_cols=22  Identities=32%  Similarity=0.567  Sum_probs=12.7

Q ss_pred             CCccCCC--CcccccCchHHHHHH
Q psy1798         322 KPYECNL--CDYKATQNSSIHFHM  343 (353)
Q Consensus       322 ~~~~C~~--C~~~f~~~~~l~~H~  343 (353)
                      +||.|.+  |.|+|++.++-..|+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHH
T ss_pred             CCccccCCChhhhhcchhhhhhhc
Confidence            3555544  666666666666665

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00016  Score=37.81  Aligned_cols=26  Identities=19%  Similarity=0.470  Sum_probs=23.3

Q ss_pred             CCcceeeCCCCCCccCCcchHHHHHH
Q psy1798         291 RNVIMYRCFVCPYLSRHKGDVKKHVR  316 (353)
Q Consensus       291 ~~~~~~~C~~C~~~f~~~~~l~~H~~  316 (353)
                      ++.+||.|.+|++.|....+|.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46689999999999999999999963

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.00027  Score=34.35  Aligned_cols=28  Identities=32%  Similarity=0.481  Sum_probs=24.2

Q ss_pred             ceeeCCC--CCCccCCcchHHHHH-HHhcCC
Q psy1798         294 IMYRCFV--CPYLSRHKGDVKKHV-RKHTGE  321 (353)
Q Consensus       294 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~  321 (353)
                      +||.|..  |.++|++.+.-..|+ ++|.++
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            5899987  999999999999998 788653

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.88  E-value=0.00022  Score=34.65  Aligned_cols=22  Identities=18%  Similarity=0.404  Sum_probs=15.8

Q ss_pred             eeeCCCCCCccCCcchHHHHHH
Q psy1798         295 MYRCFVCPYLSRHKGDVKKHVR  316 (353)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H~~  316 (353)
                      ||.|.+|++.|+....|.+|++
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            5677777777777777777764

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.76  E-value=0.00032  Score=34.07  Aligned_cols=27  Identities=30%  Similarity=0.570  Sum_probs=24.3

Q ss_pred             CccCCCCcccccCchHHHHHHhhhcCC
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      ||.|.+|++.|.-+.-|.+|.+.-|+-
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            799999999999999999998877763

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.71  E-value=0.00062  Score=30.64  Aligned_cols=25  Identities=32%  Similarity=0.854  Sum_probs=19.2

Q ss_pred             CccCCCCCccccChHHHHHHHHHhc
Q psy1798         142 PYACTECGYASILSTDLRKHIERIH  166 (353)
Q Consensus       142 ~~~C~~C~~~f~~~~~l~~H~~~~H  166 (353)
                      ||+|..|...|..+.+|+.||...|
T Consensus         2 pykcsscsqqfmqkkdlqshmiklh   26 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIKLH   26 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhcC
Confidence            6788888888888888888865443

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.64  E-value=0.00054  Score=30.84  Aligned_cols=21  Identities=29%  Similarity=0.618  Sum_probs=11.6

Q ss_pred             eeeCCCCCCccCCcchHHHHH
Q psy1798         295 MYRCFVCPYLSRHKGDVKKHV  315 (353)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H~  315 (353)
                      ||+|.-|.+.|..+..|+.|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            455555555555555555554

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.001  Score=31.47  Aligned_cols=25  Identities=28%  Similarity=0.887  Sum_probs=14.3

Q ss_pred             CccCCCCCccccChHHHHHHHHHhc
Q psy1798         142 PYACTECGYASILSTDLRKHIERIH  166 (353)
Q Consensus       142 ~~~C~~C~~~f~~~~~l~~H~~~~H  166 (353)
                      ||+|+.|..-....++|..|+...|
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHHHHc
Confidence            5555555555555555555555554

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.51  E-value=0.00079  Score=31.62  Aligned_cols=25  Identities=36%  Similarity=0.646  Sum_probs=16.9

Q ss_pred             CCccCC--CCcccccCchHHHHHHhhh
Q psy1798         322 KPYECN--LCDYKATQNSSIHFHMKLK  346 (353)
Q Consensus       322 ~~~~C~--~C~~~f~~~~~l~~H~~~~  346 (353)
                      .||+|+  -|++.|+..+.|.+|.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            466673  4777777777777776654

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.00082  Score=36.45  Aligned_cols=24  Identities=21%  Similarity=0.356  Sum_probs=17.5

Q ss_pred             CccCCCCcccccCchHHHHHHhhh
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKLK  346 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~~  346 (353)
                      .|.|.+|||.|++...|+.|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            467777777777777777776655

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.38  E-value=0.00098  Score=31.30  Aligned_cols=25  Identities=24%  Similarity=0.457  Sum_probs=18.8

Q ss_pred             ceeecCC--CCCccCchhhhhhHhhhh
Q psy1798          13 IMYRCFV--CPYLSRHKGDVKKHVRKH   37 (353)
Q Consensus        13 ~~~~C~~--C~~~f~~~~~l~~H~~~h   37 (353)
                      .+|+|+.  |++.|...+.|++|.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677766  888888888888887665

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.18  E-value=0.0026  Score=29.97  Aligned_cols=20  Identities=25%  Similarity=0.348  Sum_probs=10.7

Q ss_pred             CCCccCCcchHHHHHHHhcC
Q psy1798         301 CPYLSRHKGDVKKHVRKHTG  320 (353)
Q Consensus       301 C~~~f~~~~~l~~H~~~h~~  320 (353)
                      |.+.|.+...|.+|..+|++
T Consensus        10 c~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2          10 CEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CCCEESSTTHHHHHHHHHHT
T ss_pred             ccccchhhhhhhhhhccccC
Confidence            55555555555555555544

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.14  E-value=0.0027  Score=31.11  Aligned_cols=27  Identities=22%  Similarity=0.494  Sum_probs=19.5

Q ss_pred             CCcCCCCCCccccchhHHHHhhhhccc
Q psy1798         233 RPFPCDMCEYSAAQKWNLKMHMHFLCH  259 (353)
Q Consensus       233 ~~~~C~~C~~~f~~~~~l~~H~~~~C~  259 (353)
                      ..|.|+-||-.|.+.+.|..|+.|.|+
T Consensus         7 arf~c~pcgirfss~stleahqtyycs   33 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQAYYCS   33 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTTTTTC
T ss_pred             cceeccccceeecChhHHHhhhheeee
Confidence            356777777777777777777776664

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.10  E-value=0.0023  Score=32.91  Aligned_cols=27  Identities=19%  Similarity=0.242  Sum_probs=18.6

Q ss_pred             cceeeC--CCCCCccCCcchHHHHHHHhc
Q psy1798         293 VIMYRC--FVCPYLSRHKGDVKKHVRKHT  319 (353)
Q Consensus       293 ~~~~~C--~~C~~~f~~~~~l~~H~~~h~  319 (353)
                      ++||.|  +-|+++|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            567777  557777777777777766663

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.87  E-value=0.003  Score=29.13  Aligned_cols=21  Identities=24%  Similarity=0.501  Sum_probs=13.0

Q ss_pred             CccCCCCcccccCchHHHHHH
Q psy1798         323 PYECNLCDYKATQNSSIHFHM  343 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~  343 (353)
                      ||+|..||+.+-.+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            456666666666666666664

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.74  E-value=0.0031  Score=34.15  Aligned_cols=26  Identities=15%  Similarity=0.358  Sum_probs=23.5

Q ss_pred             ceeeCCCCCCccCCcchHHHHHHHhc
Q psy1798         294 IMYRCFVCPYLSRHKGDVKKHVRKHT  319 (353)
Q Consensus       294 ~~~~C~~C~~~f~~~~~l~~H~~~h~  319 (353)
                      ..|.|.+|++.|++...|..|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35899999999999999999998884

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.65  E-value=0.0045  Score=28.52  Aligned_cols=21  Identities=38%  Similarity=0.569  Sum_probs=12.3

Q ss_pred             CcCCCCCCccccchhHHHHhh
Q psy1798         234 PFPCDMCEYSAAQKWNLKMHM  254 (353)
Q Consensus       234 ~~~C~~C~~~f~~~~~l~~H~  254 (353)
                      ||+|..||+.+-.+.+|..|-
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            455666666666666665554

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.58  E-value=0.0044  Score=28.77  Aligned_cols=25  Identities=48%  Similarity=0.913  Sum_probs=18.9

Q ss_pred             CccCCCCCccccChHHHHHHHHHhcC
Q psy1798         142 PYACTECGYASILSTDLRKHIERIHM  167 (353)
Q Consensus       142 ~~~C~~C~~~f~~~~~l~~H~~~~H~  167 (353)
                      |-+|++|.++.+++..|+.| .++|-
T Consensus         2 pekc~ecsyscsskaalrvh-~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIH-ERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHH-HGGGC
T ss_pred             CccCcccccccCcHHHHHHh-hcccc
Confidence            45688888888888888888 67663

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.54  E-value=0.0053  Score=28.40  Aligned_cols=24  Identities=25%  Similarity=0.624  Sum_probs=17.3

Q ss_pred             ccCCCCCccccChHHHHHHHHHhc
Q psy1798         143 YACTECGYASILSTDLRKHIERIH  166 (353)
Q Consensus       143 ~~C~~C~~~f~~~~~l~~H~~~~H  166 (353)
                      |+||.|+.....+++|+.|+...|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            677777777777777777766555

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.49  E-value=0.0045  Score=31.82  Aligned_cols=28  Identities=21%  Similarity=0.513  Sum_probs=24.8

Q ss_pred             CCCCccC--CCCcccccCchHHHHHHhhhc
Q psy1798         320 GEKPYEC--NLCDYKATQNSSIHFHMKLKH  347 (353)
Q Consensus       320 ~~~~~~C--~~C~~~f~~~~~l~~H~~~~h  347 (353)
                      .++||.|  +-|+..|.+...|..|.+.|-
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4799999  679999999999999988773

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.46  E-value=0.0053  Score=28.89  Aligned_cols=28  Identities=21%  Similarity=0.364  Sum_probs=24.3

Q ss_pred             CCccCC--CCcccccCchHHHHHHhhhcCC
Q psy1798         322 KPYECN--LCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       322 ~~~~C~--~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      +||.|.  -|.+.|.+.-.|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            578884  4999999999999999999874

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.45  E-value=0.0043  Score=28.80  Aligned_cols=24  Identities=21%  Similarity=0.768  Sum_probs=15.0

Q ss_pred             CccCCCCcccccCchHHHHHHhhh
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKLK  346 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~~  346 (353)
                      |-+|+.|.++.+++..|+.|.++|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            345666666666666666666655

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.41  E-value=0.0047  Score=28.56  Aligned_cols=25  Identities=24%  Similarity=0.659  Sum_probs=17.9

Q ss_pred             CccCCCCcccccCchHHHHHHhhhc
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKLKH  347 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~~h  347 (353)
                      .|.|+.|+-...-+++|+.|+++-|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            3667777777777777777777655

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.60  E-value=0.016  Score=26.06  Aligned_cols=22  Identities=27%  Similarity=0.484  Sum_probs=17.6

Q ss_pred             eeCCCCCCccCCcchHHHHHHH
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVRK  317 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~  317 (353)
                      |.|+.|-+.|+.+.+|..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6788888888888888888764

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.20  E-value=0.015  Score=26.17  Aligned_cols=25  Identities=28%  Similarity=0.641  Sum_probs=22.8

Q ss_pred             ccCCCCcccccCchHHHHHHhhhcC
Q psy1798         324 YECNLCDYKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       324 ~~C~~C~~~f~~~~~l~~H~~~~h~  348 (353)
                      |.|++|=+.|+.+.++..|.++.|.
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiihk   26 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIHK   26 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cCCchhhHHhccccCceEEEEEecC
Confidence            7899999999999999999988763

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.04  E-value=0.022  Score=30.59  Aligned_cols=25  Identities=16%  Similarity=0.426  Sum_probs=14.1

Q ss_pred             CcceeeCCCCCCccCCcchHHHHHH
Q psy1798         292 NVIMYRCFVCPYLSRHKGDVKKHVR  316 (353)
Q Consensus       292 ~~~~~~C~~C~~~f~~~~~l~~H~~  316 (353)
                      .+.|-.|++|+....+..+|.+|+.
T Consensus        21 s~qpatcpic~avirqsrnlrrhle   45 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHH
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHH
Confidence            3445556666666655555555554

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.25  E-value=0.049  Score=25.48  Aligned_cols=25  Identities=24%  Similarity=0.437  Sum_probs=18.0

Q ss_pred             eeCCCCCCccCCcchHHHHHHHhcC
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVRKHTG  320 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~~h~~  320 (353)
                      |.|..||+...+...+.-|+...++
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            6777788887777777777764444

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.14  E-value=0.03  Score=27.57  Aligned_cols=21  Identities=14%  Similarity=0.430  Sum_probs=12.0

Q ss_pred             eeCCCCCCccCCcchHHHHHH
Q psy1798         296 YRCFVCPYLSRHKGDVKKHVR  316 (353)
Q Consensus       296 ~~C~~C~~~f~~~~~l~~H~~  316 (353)
                      |.|..||+.|+....|.+|..
T Consensus         5 fvcskcgktftrrntm~rha~   25 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHAD   25 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHH
T ss_pred             eeecccccchhcchHHHHHhh
Confidence            556666666665555555543

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.12  E-value=0.049  Score=29.20  Aligned_cols=35  Identities=14%  Similarity=0.287  Sum_probs=23.5

Q ss_pred             ccCCCCceeecCCCCCccCchhhhhhHhhhhcCCC
Q psy1798           7 NDRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEK   41 (353)
Q Consensus         7 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   41 (353)
                      +...++.+-.|++|+.+.....+|++|+...+-.+
T Consensus        17 srs~s~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          17 SRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             TTTTTSCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             ccccccCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            44445667778888887777778877776654333

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.90  E-value=0.044  Score=26.70  Aligned_cols=20  Identities=15%  Similarity=0.444  Sum_probs=15.8

Q ss_pred             eeeCCCCCCccCCcchHHHH
Q psy1798         295 MYRCFVCPYLSRHKGDVKKH  314 (353)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H  314 (353)
                      .|.|.-||..|++.+.|..|
T Consensus         8 rf~c~pcgirfss~stleah   27 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAH   27 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHH
T ss_pred             ceeccccceeecChhHHHhh
Confidence            37788888888888888877

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.62  E-value=0.041  Score=27.10  Aligned_cols=28  Identities=14%  Similarity=0.273  Sum_probs=23.0

Q ss_pred             CccCCCCcccccCchHHHHHHhhhcCCC
Q psy1798         323 PYECNLCDYKATQNSSIHFHMKLKHNMP  350 (353)
Q Consensus       323 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~  350 (353)
                      .|.|..||+.|+-+....+|-..-.|+.
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~d   31 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGPD   31 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCCC
Confidence            0469999999999999999988877653

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.36  E-value=0.075  Score=24.85  Aligned_cols=25  Identities=28%  Similarity=0.380  Sum_probs=19.8

Q ss_pred             ccccccchhhccCHHHHHHHHHhhh
Q psy1798         206 GFQCYLCLYITRQSAHMRQHLRKHT  230 (353)
Q Consensus       206 ~~~C~~C~~~f~~~~~l~~H~~~h~  230 (353)
                      .|.|..|++...+..+++.|+..-+
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             ceechhHHHHHhhccCceEEEeecc
Confidence            3788889999888888888876543

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.63  E-value=0.054  Score=27.09  Aligned_cols=24  Identities=29%  Similarity=0.445  Sum_probs=19.5

Q ss_pred             cccchhhccCHHHHHHHHHhhhCC
Q psy1798         209 CYLCLYITRQSAHMRQHLRKHTGR  232 (353)
Q Consensus       209 C~~C~~~f~~~~~l~~H~~~h~~~  232 (353)
                      |+.=++.|.....|..|++.|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            444456688999999999999986

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.24  E-value=0.05  Score=26.90  Aligned_cols=21  Identities=33%  Similarity=0.709  Sum_probs=11.2

Q ss_pred             eeeCCCCCCccCCcchHHHHH
Q psy1798         295 MYRCFVCPYLSRHKGDVKKHV  315 (353)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H~  315 (353)
                      .|.|.+|.+.++..+++-+|.
T Consensus         8 ~yRC~~C~r~YTHISNFCRHy   28 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHY   28 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHH
T ss_pred             EEEeehhhHHHHHHHHHHHHH
Confidence            455555555555555555554

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.08  E-value=0.055  Score=27.05  Aligned_cols=18  Identities=11%  Similarity=0.095  Sum_probs=9.8

Q ss_pred             ccccCchHHHHHHhhhcC
Q psy1798         331 YKATQNSSIHFHMKLKHN  348 (353)
Q Consensus       331 ~~f~~~~~l~~H~~~~h~  348 (353)
                      +.|.....|..||+.|+|
T Consensus        15 ~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHC
T ss_pred             CcchhHHHHHHHHhhcCC
Confidence            345555555555555554

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.92  E-value=0.059  Score=25.70  Aligned_cols=27  Identities=33%  Similarity=0.559  Sum_probs=19.4

Q ss_pred             eeeC--CCCCCccCCcchHHHHHHHhcCC
Q psy1798         295 MYRC--FVCPYLSRHKGDVKKHVRKHTGE  321 (353)
Q Consensus       295 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~  321 (353)
                      .|.|  +.|+..|.....|..|+-.|+++
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            3666  34778888777888888777764

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.18  E-value=0.048  Score=32.69  Aligned_cols=29  Identities=24%  Similarity=0.409  Sum_probs=20.1

Q ss_pred             cCCCCceeecCCCCCccCchhhhhhHhhh
Q psy1798           8 DRRNVIMYRCFVCPYLSRHKGDVKKHVRK   36 (353)
Q Consensus         8 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~   36 (353)
                      +.++...|-|..|++.|.+...|..|+++
T Consensus         9 D~pG~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1           9 DLPGGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCCCCEEecccccCccCCHHHHHHHHcc
Confidence            34455667777777777777777777654

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.17  E-value=0.1  Score=24.14  Aligned_cols=18  Identities=28%  Similarity=0.695  Sum_probs=13.4

Q ss_pred             CCCccCchhhhhhHhhhh
Q psy1798          20 CPYLSRHKGDVKKHVRKH   37 (353)
Q Consensus        20 C~~~f~~~~~l~~H~~~h   37 (353)
                      |++.|+..+.++.|+-+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            777777777777777665

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.16  E-value=0.17  Score=29.26  Aligned_cols=32  Identities=19%  Similarity=0.380  Sum_probs=24.3

Q ss_pred             cCCCCceeecCCCCCccCchhhhhhHhhhhcC
Q psy1798           8 DRRNVIMYRCFVCPYLSRHKGDVKKHVRKHTG   39 (353)
Q Consensus         8 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   39 (353)
                      .......|.|..|+..|.+...|..|+..|..
T Consensus        12 ~~~~s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          12 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             cccCCceeeechhHHHHhhHHHHHHHHHhccH
Confidence            34446778888888888888888888887753

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.95  E-value=0.17  Score=29.61  Aligned_cols=40  Identities=15%  Similarity=0.346  Sum_probs=28.1

Q ss_pred             CCCcceeeCCCCCCccCCcchHHHHHHHhcCCCCccCCCCccc
Q psy1798         290 RRNVIMYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYK  332 (353)
Q Consensus       290 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  332 (353)
                      .++...|+|+.|+++|+...++.   ..-.....|.|.+|+-.
T Consensus         9 ~~~~~~y~Cp~C~~~ys~Lda~~---L~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_           9 STNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             CCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCB
T ss_pred             cccCCceECCCCCCCcchhhHHH---hcCcCCCeEEecCCCCE
Confidence            45567799999999998655432   23333467999999853

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.84  E-value=0.044  Score=32.90  Aligned_cols=20  Identities=25%  Similarity=0.607  Sum_probs=10.0

Q ss_pred             eeeCCCCCCccCCcchHHHH
Q psy1798         295 MYRCFVCPYLSRHKGDVKKH  314 (353)
Q Consensus       295 ~~~C~~C~~~f~~~~~l~~H  314 (353)
                      .|.|..|.+.|.+...|..|
T Consensus        15 qfYCv~C~K~F~se~~l~~H   34 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTH   34 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHH
T ss_pred             EEecccccCccCCHHHHHHH
Confidence            34555555555555554444

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.29  E-value=0.23  Score=23.14  Aligned_cols=23  Identities=26%  Similarity=0.504  Sum_probs=13.4

Q ss_pred             CCCcccccCchHHHHHHhhhcCC
Q psy1798         327 NLCDYKATQNSSIHFHMKLKHNM  349 (353)
Q Consensus       327 ~~C~~~f~~~~~l~~H~~~~h~~  349 (353)
                      ..|+..|+++.+...|....|+.
T Consensus         8 d~cdl~fttkanmkkhfnrfhn~   30 (31)
T d1tf3a3           8 DGCDLRFTTKANMKKHFNRFHNI   30 (31)
T ss_dssp             SSCCCEESSHHHHHHHHHHHTTT
T ss_pred             CCcceEEeehHHHHHHHhhhccC
Confidence            34566666666666666555553

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.94  E-value=0.13  Score=23.41  Aligned_cols=19  Identities=11%  Similarity=0.202  Sum_probs=9.7

Q ss_pred             CCcccccCchHHHHHHhhh
Q psy1798         328 LCDYKATQNSSIHFHMKLK  346 (353)
Q Consensus       328 ~C~~~f~~~~~l~~H~~~~  346 (353)
                      -||++|..-..|..|+-.|
T Consensus         8 ~c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           8 NCGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHHHH
T ss_pred             CchHHHhhccceEEEeecc
Confidence            3555555555555554444

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.47  E-value=0.15  Score=25.08  Aligned_cols=26  Identities=27%  Similarity=0.502  Sum_probs=18.6

Q ss_pred             CCceeecCCCCCccCchhhhhhHhhh
Q psy1798          11 NVIMYRCFVCPYLSRHKGDVKKHVRK   36 (353)
Q Consensus        11 ~~~~~~C~~C~~~f~~~~~l~~H~~~   36 (353)
                      ++-.|+|.+|.++|...+++-+|..+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            34567788888888777777777554

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.95  E-value=0.19  Score=29.47  Aligned_cols=18  Identities=17%  Similarity=0.327  Sum_probs=9.3

Q ss_pred             CceeecCCCCCccCchhh
Q psy1798          12 VIMYRCFVCPYLSRHKGD   29 (353)
Q Consensus        12 ~~~~~C~~C~~~f~~~~~   29 (353)
                      ...|+|+.|++.|.....
T Consensus        12 ~~~y~Cp~C~~~ys~Lda   29 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEA   29 (62)
T ss_dssp             SSEEECSSSCCEEEHHHH
T ss_pred             CCceECCCCCCCcchhhH
Confidence            344555555555544433

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.55  E-value=0.31  Score=28.12  Aligned_cols=29  Identities=17%  Similarity=0.399  Sum_probs=25.2

Q ss_pred             CcceeeCCCCCCccCCcchHHHHHHHhcC
Q psy1798         292 NVIMYRCFVCPYLSRHKGDVKKHVRKHTG  320 (353)
Q Consensus       292 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  320 (353)
                      ....|+|..|...|-....|..|+..|+.
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHHHhccH
Confidence            34569999999999999999999999873

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.46  E-value=0.17  Score=26.19  Aligned_cols=13  Identities=23%  Similarity=0.371  Sum_probs=6.4

Q ss_pred             CcccCcccccccc
Q psy1798         173 DVRHCVHCNKEMH  185 (353)
Q Consensus       173 ~~~~c~~c~~~~~  185 (353)
                      ..|.|+.||..+.
T Consensus         4 ~~~~C~vCG~i~~   16 (37)
T d1nnqa2           4 KVYICPICGYTAV   16 (37)
T ss_dssp             CEEECTTTCCEEE
T ss_pred             cEEECCCCCCEec
Confidence            3445555555443

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=82.85  E-value=0.22  Score=25.51  Aligned_cols=13  Identities=15%  Similarity=0.340  Sum_probs=6.2

Q ss_pred             CcccCcccccccc
Q psy1798         173 DVRHCVHCNKEMH  185 (353)
Q Consensus       173 ~~~~c~~c~~~~~  185 (353)
                      ..|.|+.||....
T Consensus         4 ~~~vC~vCGyi~~   16 (36)
T d1yuza2           4 KFHLCPICGYIHK   16 (36)
T ss_dssp             CEEECSSSCCEEE
T ss_pred             CEEECCCCCCEee
Confidence            3445555554433

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.83  E-value=0.51  Score=23.40  Aligned_cols=25  Identities=20%  Similarity=0.460  Sum_probs=21.0

Q ss_pred             ccccccchhhccCHHHHHHHHHh-hh
Q psy1798         206 GFQCYLCLYITRQSAHMRQHLRK-HT  230 (353)
Q Consensus       206 ~~~C~~C~~~f~~~~~l~~H~~~-h~  230 (353)
                      ...|..|.+.|.+..++.+|+.. |.
T Consensus         3 kltclecmrtfkssfsiwrhqvevhn   28 (41)
T d1wjpa3           3 KLTCLECMRTFKSSFSIWRHQVEVHN   28 (41)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred             cccHHHHHHHHHHHHHHHHhhheecc
Confidence            36799999999999999999764 43

>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]

Probab=81.74  E-value=0.54  Score=25.42  Aligned_cols=36  Identities=22%  Similarity=0.408  Sum_probs=19.3

Q ss_pred             eeecCCCCCccCchhhhhhHhhhhcCCCCcccCCCCcc
Q psy1798          14 MYRCFVCPYLSRHKGDVKKHVRKHTGEKPYECNLCDYK   51 (353)
Q Consensus        14 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   51 (353)
                      .|.|.+||.+|.....=  -..-..-...|.|++|+..
T Consensus         3 ~y~C~~CgyiYd~~~Gd--gt~Fe~LP~dw~CP~C~a~   38 (45)
T d6rxna_           3 KYVCNVCGYEYDPAEHD--NVPFDQLPDDWCCPVCGVS   38 (45)
T ss_dssp             CEEETTTCCEECGGGGT--TCCGGGSCTTCBCTTTCCB
T ss_pred             CeEeCCCCeEECcccCC--CCCHHHCCCCCCCcCCCCc
Confidence            57888888888553321  0000111223778888743