Psyllid ID: psy1802


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-----
MNYLAGIFRQTRDDWRIGVRLFRGPLLFIEFLFLIGINVYGWRSSGVNHVLIFELNPRNHLSEQHIMELAAMLGVVWTLAVLGFLYSGTLGIPPYTTPLVLILIMTVFLFNPTKTLYYEARFWTLKILTRVLMAPLFHVNFADFWLADQLNSLVPAILDLQYLVCFYATDDSWMYFSTFPKDSSKCVDKVLYLRPVVACLPAWFRFAQCLRRYKDTKEKFPHLANAGKYATTFFVVIFSFLNIELTKRGHPSNMFFYLWILSSIISSCYSYMWDIRMDWGLFDDNTGEYTLLRDEIVYSSTTYYYVAIIEDFILRFGWALLDYLS
cccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEEcHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEHHHHHHHHHHHHHEEEEcc
ccEEEHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHc
mnylagifrqtrddwrigvrlfrgplLFIEFLFLIGINVygwrssgvNHVLIFelnprnhlseQHIMELAAMLGVVWTLAVLGFLysgtlgippyttPLVLILIMTVFLfnptktlyyEARFWTLKILTRVLMAPLFHVNFADFWLADQLNSLVPAILDLQYLVCFYatddswmyfstfpkdsskcvdkvlylrpvvacLPAWFRFAQCLRRYKDTkekfphlanagkyATTFFVVIFSFLNieltkrghpsnmFFYLWILSSIISSCYSYMWDirmdwglfddntgeytlLRDEIVYSSTTYYYVAIIEDFILRFGWALLDYLS
mnylagifrqtrddwriGVRLFRGPLLFIEFLFLIGINVYGWRSSGVNHVLIFELNPRNHLSEQHIMELAAMLGVVWTLAVLGFLYSGTLGIPPYTTPLVLILIMTVFLFNPTKTLYYEARFWTLKILTRVLMAPLFHVNFADFWLADQLNSLVPAILDLQYLVCFYATDDSWMYFSTFPKDSSKCVDKVLYLRPVVACLPAWFRFAQCLRRYKDTKEKFPHLANAGKYATTFFVVIFSFLNIELTKRGHPSNMFFYLWILSSIISSCYSYMWDIRMDWGLFDDNTGEYTLLRDEIVYSSTTYYYVAIIEDFILRFGWALLDYLS
MNYLAGIFRQTRDDWRIGVRLFRGPllfieflfligiNVYGWRSSGVNHVLIFELNPRNHLSEQHIMELAAMLGVVWTLAVLGFLYSGTLGIPPYTTPLVLILIMTVFLFNPTKTLYYEARFWTLKILTRVLMAPLFHVNFADFWLADQLNSLVPAILDLQYLVCFYATDDSWMYFSTFPKDSSKCVDKVLYLRPVVACLPAWFRFAQCLRRYKDTKEKFPHLANAGKYATTFFVVIFSFLNIELTKRGHPSNMFFylwilssiisscysyMWDIRMDWGLFDDNTGEYTLLRDEIVYSSTTYYYVAIIEDFILRFGWALLDYLS
**YLAGIFRQTRDDWRIGVRLFRGPLLFIEFLFLIGINVYGWRSSGVNHVLIFELNPRNHLSEQHIMELAAMLGVVWTLAVLGFLYSGTLGIPPYTTPLVLILIMTVFLFNPTKTLYYEARFWTLKILTRVLMAPLFHVNFADFWLADQLNSLVPAILDLQYLVCFYATDDSWMYFSTFPKDSSKCVDKVLYLRPVVACLPAWFRFAQCLRRYKDTKEKFPHLANAGKYATTFFVVIFSFLNIELTKRGHPSNMFFYLWILSSIISSCYSYMWDIRMDWGLFDDNTGEYTLLRDEIVYSSTTYYYVAIIEDFILRFGWALLDYL*
*NYL*G*FRQTRDDWRIGVRLFRGPLLFIEFLFLIGINVYGWRSSGVNHVLIFELNPRNHLSEQHIMELAAMLGVVWTLAVLGFLYSGTLGIPPYTTPLVLILIMTVFLFNPTKTLYYEARFWTLKILTRVLMAPLFHVNFADFWLADQLNSLVPAILDLQYLVCFYATDDSWMYFSTFPKDSSKCVDKVLYLRPVVACLPAWFRFAQCLRRYKDTKEKFPHLANAGKYATTFFVVIFSFLNIELTKRGHPSNMFFYLWILSSIISSCYSYMWDIRMDWGLFDDNTGEYTLLRDEIVYSSTTYYYVAIIEDFILRFGWALLDYLS
MNYLAGIFRQTRDDWRIGVRLFRGPLLFIEFLFLIGINVYGWRSSGVNHVLIFELNPRNHLSEQHIMELAAMLGVVWTLAVLGFLYSGTLGIPPYTTPLVLILIMTVFLFNPTKTLYYEARFWTLKILTRVLMAPLFHVNFADFWLADQLNSLVPAILDLQYLVCFYATDDSWMYFSTFPKDSSKCVDKVLYLRPVVACLPAWFRFAQCLRRYKDTKEKFPHLANAGKYATTFFVVIFSFLNIELTKRGHPSNMFFYLWILSSIISSCYSYMWDIRMDWGLFDDNTGEYTLLRDEIVYSSTTYYYVAIIEDFILRFGWALLDYLS
MNYLAGIFRQTRDDWRIGVRLFRGPLLFIEFLFLIGINVYGWRSSGVNHVLIFELNPRNHLSEQHIMELAAMLGVVWTLAVLGFLYSGTLGIPPYTTPLVLILIMTVFLFNPTKTLYYEARFWTLKILTRVLMAPLFHVNFADFWLADQLNSLVPAILDLQYLVCFYATDDSWMYFSTFPKDSSKCVDKVLYLRPVVACLPAWFRFAQCLRRYKDTKEKFPHLANAGKYATTFFVVIFSFLNIELTKRGHPSNMFFYLWILSSIISSCYSYMWDIRMDWGLFDDNTGEYTLLRDEIVYSSTTYYYVAIIEDFILRFGWALLDYLS
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooo
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooo
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooo
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiii
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiii
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MNYLAGIFRQTRDDWRIGVRLFRGPLLFIEFLFLIGINVYGWRSSGVNHVLIFELNPRNHLSEQHIMELAAMLGVVWTLAVLGFLYSGTLGIPPYTTPLVLILIMTVFLFNPTKTLYYEARFWTLKILTRVLMAPLFHVNFADFWLADQLNSLVPAILDLQYLVCFYATDDSWMYFSTFPKDSSKCVDKVLYLRPVVACLPAWFRFAQCLRRYKDTKEKFPHLANAGKYATTFFVVIFSFLNIELTKRGHPSNMFFYLWILSSIISSCYSYMWDIRMDWGLFDDNTGEYTLLRDEIVYSSTTYYYVAIIEDFILRFGWALLDYLS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query325 2.2.26 [Sep-21-2011]
Q9UBH6 696 Xenotropic and polytropic yes N/A 0.972 0.454 0.546 7e-94
Q9TU72 696 Xenotropic and polytropic N/A N/A 0.972 0.454 0.549 1e-93
A7XZ53 696 Xenotropic and polytropic N/A N/A 0.929 0.433 0.550 2e-92
Q6DD44 692 Xenotropic and polytropic N/A N/A 0.96 0.450 0.533 4e-92
Q9QZ71 696 Xenotropic and polytropic N/A N/A 0.929 0.433 0.547 7e-92
Q9QZ70 696 Xenotropic and polytropic yes N/A 0.972 0.454 0.537 1e-91
Q9Z0U0 695 Xenotropic and polytropic yes N/A 0.929 0.434 0.547 1e-91
Q9R032 696 Xenotropic and polytropic N/A N/A 0.929 0.433 0.547 1e-91
Q9R031 691 Xenotropic and polytropic N/A N/A 0.923 0.434 0.547 1e-90
A8DZH4 693 Xenotropic and polytropic yes N/A 0.923 0.432 0.547 1e-90
>sp|Q9UBH6|XPR1_HUMAN Xenotropic and polytropic retrovirus receptor 1 OS=Homo sapiens GN=XPR1 PE=1 SV=1 Back     alignment and function desciption
 Score =  343 bits (881), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 177/324 (54%), Positives = 222/324 (68%), Gaps = 8/324 (2%)

Query: 4   LAGIFR--QTRDDWRIGVRLFRGPLLFIEFLFLIGINVYGWRSSGVNHVLIFELNPRNHL 61
           LA +F+    R  W + +R++RG  L IEFLFL+GIN YGWR +GVNHVLIFELNPR++L
Sbjct: 253 LAAVFKLETDRSIWPL-IRIYRGGFLLIEFLFLLGINTYGWRQAGVNHVLIFELNPRSNL 311

Query: 62  SEQHIMELAAMLGVVWTLAVLGFLYSGTLGIPPYTTPLVLILIMTVFLFNPTKTLYYEAR 121
           S QH+ E+A  LG++W L++L   ++    IP Y  PL L   M  FL NPTKT YY++R
Sbjct: 312 SHQHLFEIAGFLGILWCLSLLACFFAPISVIPTYVYPLALYGFMVFFLINPTKTFYYKSR 371

Query: 122 FWTLKILTRVLMAPLFHVNFADFWLADQLNSLVPAILDLQYLVCFYAT----DDSWMYFS 177
           FW LK+L RV  AP   V FADFWLADQLNSL   ++DL+Y++CFY+     D+S     
Sbjct: 372 FWLLKLLFRVFTAPFHKVGFADFWLADQLNSLSVILMDLEYMICFYSLELKWDESKGLLP 431

Query: 178 TFPKDSSKCVDKVLYLRPVVACLPAWFRFAQCLRRYKDTKEKFPHLANAGKYATTFFVVI 237
              ++S  C      +R +V C+PAW RF QCLRRY+DTK  FPHL NAGKY+TTFF+V 
Sbjct: 432 NNSEESGICHKYTYGVRAIVQCIPAWLRFIQCLRRYRDTKRAFPHLVNAGKYSTTFFMVT 491

Query: 238 FSFLNIELTKRGHPSNM-FFYLWILSSIISSCYSYMWDIRMDWGLFDDNTGEYTLLRDEI 296
           F+ L     +RGH   M FFYLWI+  IISSCY+ +WD++MDWGLFD N GE T LR+EI
Sbjct: 492 FAALYSTHKERGHSDTMVFFYLWIVFYIISSCYTLIWDLKMDWGLFDKNAGENTFLREEI 551

Query: 297 VYSSTTYYYVAIIEDFILRFGWAL 320
           VY    YYY AIIED ILRF W +
Sbjct: 552 VYPQKAYYYCAIIEDVILRFAWTI 575




May function in G-protein coupled signal transduction (By similarity). Potential receptor for xenotropic and polytropic murine leukemia retroviruses.
Homo sapiens (taxid: 9606)
>sp|Q9TU72|XPR1_MUSVI Xenotropic and polytropic retrovirus receptor 1 OS=Mustela vison GN=XPR1 PE=2 SV=1 Back     alignment and function description
>sp|A7XZ53|XPR1_MUSPA Xenotropic and polytropic retrovirus receptor 1 homolog OS=Mus pahari GN=Xpr1 PE=1 SV=1 Back     alignment and function description
>sp|Q6DD44|XPR1_XENLA Xenotropic and polytropic retrovirus receptor 1 homolog OS=Xenopus laevis GN=xpr1 PE=2 SV=1 Back     alignment and function description
>sp|Q9QZ71|XPR1_MUSDU Xenotropic and polytropic retrovirus receptor 1 OS=Mus dunni GN=Xpr1 PE=1 SV=1 Back     alignment and function description
>sp|Q9QZ70|XPR1_CRIGR Xenotropic and polytropic retrovirus receptor 1 homolog OS=Cricetulus griseus GN=XPR1 PE=2 SV=1 Back     alignment and function description
>sp|Q9Z0U0|XPR1_MOUSE Xenotropic and polytropic retrovirus receptor 1 OS=Mus musculus GN=Xpr1 PE=1 SV=1 Back     alignment and function description
>sp|Q9R032|XPR1_MUSSP Xenotropic and polytropic retrovirus receptor 1 OS=Mus spretus GN=Xpr1 PE=1 SV=1 Back     alignment and function description
>sp|Q9R031|XPR1_MUSMC Xenotropic and polytropic retrovirus receptor 1 homolog OS=Mus musculus castaneus GN=Xpr1 PE=2 SV=1 Back     alignment and function description
>sp|A8DZH4|XPR1_DANRE Xenotropic and polytropic retrovirus receptor 1 homolog OS=Danio rerio GN=xpr1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query325
328717124 690 PREDICTED: xenotropic and polytropic ret 0.975 0.459 0.656 1e-123
383866061 667 PREDICTED: xenotropic and polytropic ret 0.96 0.467 0.641 1e-121
118786663 683 AGAP005557-PA [Anopheles gambiae str. PE 0.963 0.458 0.630 1e-120
91079722 662 PREDICTED: similar to xenotropic and pol 0.96 0.471 0.632 1e-118
312383392 670 hypothetical protein AND_03488 [Anophele 0.96 0.465 0.619 1e-118
170045425 671 xenotropic and polytropic murine leukemi 0.96 0.464 0.628 1e-118
157104427 670 xenotropic and polytropic murine leukemi 0.96 0.465 0.616 1e-117
380019717 666 PREDICTED: LOW QUALITY PROTEIN: xenotrop 0.96 0.468 0.641 1e-117
350408596 666 PREDICTED: xenotropic and polytropic ret 0.96 0.468 0.641 1e-116
307167487 664 Xenotropic and polytropic retrovirus rec 0.953 0.466 0.609 1e-116
>gi|328717124|ref|XP_001943999.2| PREDICTED: xenotropic and polytropic retrovirus receptor 1 homolog [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 210/320 (65%), Positives = 252/320 (78%), Gaps = 3/320 (0%)

Query: 4   LAGIFRQTRD-DWRIGVRLFRGPLLFIEFLFLIGINVYGWRSSGVNHVLIFELNPRNHLS 62
           + GI     + DWR+ VRL+RGPLL + FLFL+GINVY WRSSGVNHVLIFEL+PRNHL+
Sbjct: 250 ITGIAHSNENTDWRVMVRLYRGPLLLVIFLFLMGINVYCWRSSGVNHVLIFELDPRNHLT 309

Query: 63  EQHIMELAAMLGVVWTLAVLGFLYSGTLGIPPYTTPLVLILIMTVFLFNPTKTLYYEARF 122
           EQHIMELA + G+VW  + L FLYS  L IPPY  PL+L ++M  FLFNPTKTL ++ARF
Sbjct: 310 EQHIMELATVFGLVWAGSALIFLYSEALHIPPYINPLILAVLMIAFLFNPTKTLRHDARF 369

Query: 123 WTLKILTRVLMAPLFHVNFADFWLADQLNSLVPAILDLQYLVCFYATDDSWMYFSTFPKD 182
           W L++  R+L AP F+V FADFWLADQL SLVPA+LD QYLVCFY T+D WM   T   D
Sbjct: 370 WVLRVAVRILFAPFFYVGFADFWLADQLTSLVPALLDFQYLVCFYLTNDKWMSNKTIDID 429

Query: 183 SSKCVDKVLYLRPVVACLPAWFRFAQCLRRYKDTKEKFPHLANAGKYATTFFVVIFSFLN 242
            SKCV++V  LRP VACLPAWFRF QCLRRY+D++E FPHLANA KYATTFFV+ FSFLN
Sbjct: 430 GSKCVERVWLLRPFVACLPAWFRFMQCLRRYRDSREAFPHLANAAKYATTFFVITFSFLN 489

Query: 243 IELTKRGHPSN--MFFYLWILSSIISSCYSYMWDIRMDWGLFDDNTGEYTLLRDEIVYSS 300
           ++  K     +  ++FYLWI +SI SS YSY+WD++MDWGLFD N GE   LR+EIVYSS
Sbjct: 490 LQYAKNNPEEDPSVYFYLWISASIFSSLYSYIWDLKMDWGLFDRNAGENRFLREEIVYSS 549

Query: 301 TTYYYVAIIEDFILRFGWAL 320
           T +YY+AI+EDF+LRFGWAL
Sbjct: 550 TAFYYIAIVEDFVLRFGWAL 569




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383866061|ref|XP_003708490.1| PREDICTED: xenotropic and polytropic retrovirus receptor 1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|118786663|ref|XP_315560.2| AGAP005557-PA [Anopheles gambiae str. PEST] gi|116126430|gb|EAA11952.3| AGAP005557-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|91079722|ref|XP_969695.1| PREDICTED: similar to xenotropic and polytropic murine leukemia virus receptor xpr1 [Tribolium castaneum] gi|270003331|gb|EEZ99778.1| hypothetical protein TcasGA2_TC002557 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|312383392|gb|EFR28497.1| hypothetical protein AND_03488 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|170045425|ref|XP_001850310.1| xenotropic and polytropic murine leukemia virus receptor xpr1 [Culex quinquefasciatus] gi|167868479|gb|EDS31862.1| xenotropic and polytropic murine leukemia virus receptor xpr1 [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|157104427|ref|XP_001648404.1| xenotropic and polytropic murine leukemia virus receptor xpr1 [Aedes aegypti] gi|108869205|gb|EAT33430.1| AAEL014297-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|380019717|ref|XP_003693749.1| PREDICTED: LOW QUALITY PROTEIN: xenotropic and polytropic retrovirus receptor 1-like [Apis florea] Back     alignment and taxonomy information
>gi|350408596|ref|XP_003488456.1| PREDICTED: xenotropic and polytropic retrovirus receptor 1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|307167487|gb|EFN61060.1| Xenotropic and polytropic retrovirus receptor 1 [Camponotus floridanus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query325
FB|FBgn0030890 674 CG7536 [Drosophila melanogaste 0.975 0.470 0.542 3.4e-93
FB|FBgn0035649 671 CG10483 [Drosophila melanogast 0.963 0.466 0.534 7.3e-91
UNIPROTKB|F1S680 658 XPR1 "Uncharacterized protein" 0.972 0.480 0.5 2.8e-82
UNIPROTKB|Q9UBH6 696 XPR1 "Xenotropic and polytropi 0.972 0.454 0.496 3.6e-82
UNIPROTKB|F6PMF3 696 XPR1 "Uncharacterized protein" 0.972 0.454 0.496 4.5e-82
UNIPROTKB|F1MHL9 696 XPR1 "Uncharacterized protein" 0.972 0.454 0.496 3.2e-81
ZFIN|ZDB-GENE-060503-266 693 si:dkey-60b12.7 "si:dkey-60b12 0.953 0.447 0.493 3.2e-81
RGD|1306554 696 Xpr1 "xenotropic and polytropi 0.969 0.452 0.486 6.6e-81
ZFIN|ZDB-GENE-060503-362 692 xpr1 "xenotropic and polytropi 0.972 0.456 0.484 7.6e-80
UNIPROTKB|E2J876 690 Xpr1 "Xenotropic and polytropi 0.966 0.455 0.484 1.6e-79
FB|FBgn0030890 CG7536 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
 Identities = 177/326 (54%), Positives = 223/326 (68%)

Query:     4 LAGIFRQ-TRDDWRIGVRLFRGPXXXXXXXXXXXXNVYGWRSSGVNHVLIFELNPRNHLS 62
             ++ IF + + ++ ++  RL+RGP            N+YGWRSSGVNHVLIFEL+PRNHLS
Sbjct:   242 VSAIFHEISGENLKVTFRLYRGPLLIIEFIFLIGVNIYGWRSSGVNHVLIFELDPRNHLS 301

Query:    63 EQHIMELAAMLGVVWTLAVLGFLYSGTLGIPPYTTPLVLILIMTVFLFNPTKTLYYEARF 122
             EQH+MELAA+ GV+WTL++L FLYS +L IP +  PL L LIM +FL NP   LY++ARF
Sbjct:   302 EQHLMELAAIFGVIWTLSMLSFLYSASLAIPAFINPLTLTLIMVLFLANPFHVLYHDARF 361

Query:   123 WTLKILTRVLMAPLFHVNFADFWLADQLNSLVPAILDLQYLVCFYATDDSWMYFSTFPKD 182
             W  +I  R + AP FHV FADFWL DQLNSL  AILD +YL+CFY T+ +W    T  +D
Sbjct:   362 WLWRITGRCVSAPFFHVGFADFWLGDQLNSLATAILDFEYLICFYFTNGNW----TEARD 417

Query:   183 SSKCVDKVLYLRPVVACLPAWFRFAQCLRRYKDTKEKFPHLANAGKYATTFFVVIFSFLN 242
             +S C++K   +RP+V CLPAWFRFAQCLRRY+D++E FPHL NAGKY+TTF VVIF+ L 
Sbjct:   418 ASICMEKDFIIRPIVNCLPAWFRFAQCLRRYRDSREAFPHLVNAGKYSTTFMVVIFATLK 477

Query:   243 IELTKRGHPS---NMFFXXXXXXXXXXXXXXXMWDIRMDWGLFDDNTGEYTLLRDEIVYS 299
                    + S   N +                 WDI+MDWGLFD N GE T LR+E+VYS
Sbjct:   478 -SFHSPNYASTFDNPYTWLWIIASIVSSCYAYTWDIKMDWGLFDKNAGENTFLREEVVYS 536

Query:   300 STTYYYVAIIEDFILRFGWALLDYLS 325
             ST +YY AI+ED  LRF WAL  YL+
Sbjct:   537 STGFYYFAILEDLALRFIWALSFYLT 562




GO:0016021 "integral to membrane" evidence=IEA
FB|FBgn0035649 CG10483 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1S680 XPR1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q9UBH6 XPR1 "Xenotropic and polytropic retrovirus receptor 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F6PMF3 XPR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1MHL9 XPR1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060503-266 si:dkey-60b12.7 "si:dkey-60b12.7" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|1306554 Xpr1 "xenotropic and polytropic retrovirus receptor 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060503-362 xpr1 "xenotropic and polytropic retrovirus receptor 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E2J876 Xpr1 "Xenotropic and polytropic retrovirus receptor 1" [Mus musculus domesticus (taxid:10092)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9QZ70XPR1_CRIGRNo assigned EC number0.53700.97230.4540yesN/A
Q9UBH6XPR1_HUMANNo assigned EC number0.54620.97230.4540yesN/A
Q9Z0U0XPR1_MOUSENo assigned EC number0.54720.92920.4345yesN/A
Q28CY9XPR1_XENTRNo assigned EC number0.53050.94760.4450yesN/A
A8DZH4XPR1_DANRENo assigned EC number0.54750.92300.4329yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query325
pfam03124337 pfam03124, EXS, EXS family 1e-101
COG5409384 COG5409, COG5409, EXS domain-containing protein [S 5e-39
>gnl|CDD|217378 pfam03124, EXS, EXS family Back     alignment and domain information
 Score =  299 bits (769), Expect = e-101
 Identities = 135/305 (44%), Positives = 187/305 (61%), Gaps = 16/305 (5%)

Query: 20  RLFRGPLLFIEFLFLIGINVYGWRSSGVNHVLIFELNPRNHLSEQHIMELAAMLGVVWTL 79
            L+RG  L I  L+L G+N+Y W+ SG+N+V IFE +PR  LS + ++ELA+   V+W L
Sbjct: 4   PLYRGFFLLILGLWLWGLNLYVWKRSGINYVFIFEFDPRTSLSHRELLELASFFTVLWLL 63

Query: 80  AVLGFLYSGTLGIPPY----TTPLVLILIMTVFLFNPTKTLYYEARFWTLKILTRVLMAP 135
           + L +L    L +         PLVL+LI+ + LF P    Y   RFW L+ L R+L+AP
Sbjct: 64  SFLLYLLLEHLELTKPASWVQVPLVLLLIVLLILFLPFNIFYRSGRFWLLRTLFRILLAP 123

Query: 136 LFHVNFADFWLADQLNSLVPAILDLQYLVCFYATDDSWMYFSTFPKDSSKCVDKVLYLRP 195
            + V F DF+LADQL SLV  + DL+Y VC+Y  +             + C    +Y+ P
Sbjct: 124 FYPVKFRDFFLADQLTSLVKVLADLEYTVCYYFNNGDS--------SDNTCGSSKVYVLP 175

Query: 196 VVACLPAWFRFAQCLRRYKDTKEKFPHLANAGKYATTFFVVIFSFLNIELTKRGHPSNMF 255
           +VACLP W RF QCLRRY+DT + FPHLANA KY+T   VV+ S     L ++ + S+ +
Sbjct: 176 IVACLPYWIRFLQCLRRYRDTGDAFPHLANALKYSTAIPVVVLST----LYRKYNTSDAY 231

Query: 256 FYLWILSSIISSCYSYMWDIRMDWGLFDDNTGEYTLLRDEIVYSSTTYYYVAIIEDFILR 315
             LWI+ SII+S YS+ WD++MDWGLF  N+ +   LRD+++Y     YY AI+ D ILR
Sbjct: 232 RILWIVFSIINSIYSFYWDVKMDWGLFQKNSSKNRFLRDKLLYPRKWVYYFAIVLDLILR 291

Query: 316 FGWAL 320
           F W L
Sbjct: 292 FAWLL 296


We have named this region the EXS family after (ERD1, XPR1, and SYG1). This family includes C-terminus portions from the SYG1 G-protein associated signal transduction protein from Saccharomyces cerevisiae, and sequences that are thought to be murine leukaemia virus (MLV) receptors (XPR1). N-terminus portions from these proteins are aligned in the SPX pfam03105 family. The previously noted similarity between SYG1 and MLV receptors over their whole sequences is thus borne out in pfam03105 and this family. While the N-termini aligned in pfam03105 are thought to be involved in signal transduction, the role of the C-terminus sequences aligned in this family is not known. This region of similarity contains several predicted transmembrane helices. This family also includes the ERD1 (ERD: ER retention defective) yeast proteins. ERD1 proteins are involved in the localisation of endogenous endoplasmic reticulum (ER) proteins. erd1 null mutants secrete such proteins even though they possess the C-terminal HDEL ER lumen localisation label sequence. In addition, null mutants also exhibit defects in the Golgi-dependent processing of several glycoproteins, which led to the suggestion that the sorting of luminal ER proteins actually occurs in the Golgi, with subsequent return of these proteins to the ER via `salvage' vesicles. Length = 337

>gnl|CDD|227696 COG5409, COG5409, EXS domain-containing protein [Signal transduction mechanisms] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 325
PF03124345 EXS: EXS family; InterPro: IPR004342 The EXS domai 100.0
KOG1162|consensus617 100.0
COG5409384 EXS domain-containing protein [Signal transduction 100.0
>PF03124 EXS: EXS family; InterPro: IPR004342 The EXS domain is named after ERD1/XPR1/SYG1 and proteins containing this motif include the C-terminal of the SYG1 G-protein associated signal transduction protein from Saccharomyces cerevisiae, and sequences that are thought to be Murine leukemia virus (MLV) receptors (XPR1 Back     alignment and domain information
Probab=100.00  E-value=6.2e-77  Score=575.22  Aligned_cols=299  Identities=44%  Similarity=0.809  Sum_probs=270.9

Q ss_pred             hhhhchhhHHHHHHHHHHHHHHHHHhhcCCCceEEEeecCCCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC----
Q psy1802          18 GVRLFRGPLLFIEFLFLIGINVYGWRSSGVNHVLIFELNPRNHLSEQHIMELAAMLGVVWTLAVLGFLYSGTLGIP----   93 (325)
Q Consensus        18 ~~~lyr~~~l~~l~~~l~g~n~~vw~~~~INy~~IFe~d~r~~l~~~~~~~~a~~~~~~~~l~~~~fl~~~~~~~~----   93 (325)
                      ++++||+++++++++|+||+|+++|+++||||++|||+||+++++++|++++++++++++++++..++.....+..    
T Consensus         1 ~~~~~R~~~L~~l~~~l~~~nl~v~~~~~Iny~~If~~~~~~~~~~~~~~~~a~~~~~~~~l~~~~~l~~~~~~~~~~~~   80 (345)
T PF03124_consen    1 LPPPFRGLLLLILGLWLWGINLYVWSRYRINYVFIFELDPRNSLSYRQLFELASFLTIIWLLCFLIYLASVSPSIISFAN   80 (345)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHhcCCcccCCcHHHHHhhhHHHHHHHHHHHHHHHHHHcCCcccccc
Confidence            3689999999999999999999999999999999999999999999999999999999999988887765443321    


Q ss_pred             ---cchhHHHHHHHHHHHHHcCcccchhhHHHHHHHHhhhhhhcCceeeecchhhHHHhhhcHHHHhhhhhhhhhhhccC
Q psy1802          94 ---PYTTPLVLILIMTVFLFNPTKTLYYEARFWTLKILTRVLMAPLFHVNFADFWLADQLNSLVPAILDLQYLVCFYATD  170 (325)
Q Consensus        94 ---~~~~Pl~~~~~~l~~l~~P~~~~~~~~R~~ll~~l~r~l~~pf~~V~F~Df~laDqltSl~~~l~D~~~~~c~~~~~  170 (325)
                         .+++|+++++++++++++|.+++++++|+|+++++.|++.+|+.+|+|+|||+||||||++|+++|+++++|+|.+ 
T Consensus        81 ~~~~~~~Pll~~~~~~~~l~~P~~~~~~~~R~~~~~~l~ril~~~~~~v~f~d~~laD~LtS~~~~l~D~~~~~c~~~~-  159 (345)
T PF03124_consen   81 WYFVEYIPLLLLLILLLLLFFPFNIFYRSSRRWFLRTLKRILLAPFYPVRFRDFFLADQLTSLSKVLGDLEFTICYYFS-  159 (345)
T ss_pred             hhhHHHhhHHHHHHHHHHhhcccchhhhhHHHHHHHHHHHHHhcccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-
Confidence               2378999999999999999999999999999999999999999999999999999999999999999999999996 


Q ss_pred             CCcccccCCCCCCCccccccccchhhhhhhhHHHHHHHHHHHHHhcCCCccchhhHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy1802         171 DSWMYFSTFPKDSSKCVDKVLYLRPVVACLPAWFRFAQCLRRYKDTKEKFPHLANAGKYATTFFVVIFSFLNIELTKRGH  250 (325)
Q Consensus       171 ~~~~~~~~~~~~~~~C~~~~~~~~~~~~~lP~~iR~~QClrry~dt~~~~~hL~Na~KY~~s~~v~~~~~l~~~~~~~~~  250 (325)
                      +.+.      ++.++|++.+....|+++++|++||++||+|||+||+++.+||.||+||++++++++++++.+.+++++ 
T Consensus       160 ~~~~------~~~~~c~~~~~~~~~~~~~lP~~iR~~QClrry~~~~~~~~hL~Na~KY~~~~~v~~~~~~~~~~~~~~-  232 (345)
T PF03124_consen  160 GSFT------SPSNQCGSSSWYIDPIVASLPYWIRFLQCLRRYRDTGDRFPHLFNALKYSSSIPVIILSALYRFYPSSD-  232 (345)
T ss_pred             cccc------CCCCcCccccHhHHhHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCcc-
Confidence            3332      235789988877889999999999999999999999997799999999999999999999988765532 


Q ss_pred             CCchhHHHHHHHHHHhhhhhhhhhhhhccCCccCCC-CCCCCCCCccccCCCceeehhhhhhHHHHHHhhhhhhc
Q psy1802         251 PSNMFFYLWILSSIISSCYSYMWDIRMDWGLFDDNT-GEYTLLRDEIVYSSTTYYYVAIIEDFILRFGWALLDYL  324 (325)
Q Consensus       251 ~~~~~~~~wi~~~~i~S~Ys~~WDi~mDWgL~~~~~-~~~~~LR~~l~y~~~~~Yy~Aiv~n~ilRf~W~~~ls~  324 (325)
                      .+...+.+|++++++||+||++|||+|||||+++++ +++++||++++||+|++||+||+.|+++|++|+++++.
T Consensus       233 ~~~~~~~~w~~~~~i~s~Ys~~WDv~~DWgL~~~~~~~~~~~LR~~l~~~~~~~Yy~ai~~n~ilRf~W~~~~~~  307 (345)
T PF03124_consen  233 SSIWLFILWIIFALINSLYSFYWDVKMDWGLFQPKKKSKNWLLRRRLLYPRKWFYYFAIILNFILRFAWILTLSP  307 (345)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHhcccccCCccccCCCCCccccccCCcchhhhHHHHHHHHHHHHHHHHHH
Confidence            223578999999999999999999999999997652 57999999999998899999999999999999999864



The N-terminal of these proteins often have an SPX domain (IPR004331 from INTERPRO) []. While the N-terminal is thought to be involved in signal transduction, the role of the C-terminal is not known. This region of similarity contains several predicted transmembrane helices. This family also includes the ERD1 (ERD: ER retention defective) S. cerevisiae proteins. ERD1 proteins are involved in the localization of endogenous endoplasmic reticulum (ER) proteins. Erd1 null mutants secrete such proteins even though they possess the C-terminal HDEL ER lumen localization label sequence. In addition, null mutants also exhibit defects in the Golgi-dependent processing of several glycoproteins, which led to the suggestion that the sorting of luminal ER proteins actually occurs in the Golgi, with subsequent return of these proteins to the ER via `salvage' vesicles [].; GO: 0016021 integral to membrane

>KOG1162|consensus Back     alignment and domain information
>COG5409 EXS domain-containing protein [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00