Psyllid ID: psy18081

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--
Protein Sequence
MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSILLMSMIQNSQTDLFNSDVIWQP
Secondary Structure (PSIPRED)
ccccccEEEEEEEcccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccEEEEccHHHHHcccccccccEEcc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEEcccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccEEEHHHHHccccccccccEEEcc
Coil and Loop (DISEMBL)
mstekmpikinliapplyvmttvtpekADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSILLMSMIQNSqtdlfnsdviwqp
Flexible Loop (DISEMBL)
mstekmpikinliapplyVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSILLMSMIQNsqtdlfnsdviwqp
Low Complexity Region (SEG)
MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSILLMSMIQNSQTDLFNSDVIWQP
Disordered region (IsUnstruct)
*******IKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSILLMSMIQNSQTDLFNSDVIW**
Disordered Region (DISOPRED)
****KMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSIL****************VIWQP
Disordered Region (DISEMBL)
MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSILLMSMIQNSQTDLFNSDVIWQP
Disordered Region (DISPRO)
****KMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSILLMSMIQNSQTDLFNSDVIWQP
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSTEKMPIKINLIAPPLYVMTTVTPEKADGxxxxxxxxxxxxxxxxxxxxxFQVQMAVSILLMSMIQNSQTDLFNSDVIWQP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	82	2.2.26 [Sep-21-2011]
P41374	341	Eukaryotic translation in	yes	N/A	0.695	0.167	0.631	2e-13
Q5ZLX2	315	Eukaryotic translation in	yes	N/A	0.670	0.174	0.654	4e-13
P05198	315	Eukaryotic translation in	yes	N/A	0.670	0.174	0.654	4e-13
Q6GL89	315	Eukaryotic translation in	yes	N/A	0.670	0.174	0.636	4e-13
Q7ZTK4	315	Eukaryotic translation in	N/A	N/A	0.670	0.174	0.636	4e-13
Q5R493	315	Eukaryotic translation in	yes	N/A	0.670	0.174	0.654	4e-13
P68101	315	Eukaryotic translation in	yes	N/A	0.670	0.174	0.654	4e-13
Q6ZWX6	315	Eukaryotic translation in	yes	N/A	0.670	0.174	0.654	4e-13
P68102	315	Eukaryotic translation in	yes	N/A	0.670	0.174	0.654	4e-13
P20459	304	Eukaryotic translation in	yes	N/A	0.682	0.184	0.446	1e-06

>sp|P41374|IF2A_DROME Eukaryotic translation initiation factor 2 subunit 1 OS=Drosophila melanogaster GN=eIF-2alpha PE=2 SV=1

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/57 (63%), Positives = 46/57 (80%)

Query: 1   MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMA 57
           +STE++PI+INLIAPPLYVMTT T +K DGLKAL+ AI+ I+AK  +  G F+V MA
Sbjct: 216 LSTEELPIRINLIAPPLYVMTTSTTKKTDGLKALEVAIEHIRAKTSEYDGEFKVIMA 272

eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This preinitiation complex mediates ribosomal recognition of a start codon during the scanning process of the leader region.
Drosophila melanogaster (taxid: 7227)

>sp|Q5ZLX2|IF2A_CHICK Eukaryotic translation initiation factor 2 subunit 1 OS=Gallus gallus GN=EIF2S1 PE=2 SV=2

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/55 (65%), Positives = 41/55 (74%)

Query: 2   STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQM 56
           STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK KIE+  GVF VQM
Sbjct: 219 STENMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMAVIKEKIEEKRGVFNVQM 273

Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by eIF-2B.

Gallus gallus (taxid: 9031)

>sp|P05198|IF2A_HUMAN Eukaryotic translation initiation factor 2 subunit 1 OS=Homo sapiens GN=EIF2S1 PE=1 SV=3

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/55 (65%), Positives = 41/55 (74%)

Query: 2   STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQM 56
           STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK KIE+  GVF VQM
Sbjct: 219 STENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQM 273

Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by eIF-2B.

Homo sapiens (taxid: 9606)

>sp|Q6GL89|IF2A_XENTR Eukaryotic translation initiation factor 2 subunit 1 OS=Xenopus tropicalis GN=eif2s1 PE=2 SV=1

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/55 (63%), Positives = 41/55 (74%)

Query: 2   STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQM 56
           STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK +IE+  GVF VQM
Sbjct: 219 STENMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMSVIKERIEEKRGVFNVQM 273

Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by eIF-2B.

Xenopus tropicalis (taxid: 8364)

>sp|Q7ZTK4|IF2A_XENLA Eukaryotic translation initiation factor 2 subunit 1 OS=Xenopus laevis GN=eif2s1 PE=2 SV=1

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/55 (63%), Positives = 41/55 (74%)

Query: 2   STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQM 56
           STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK +IE+  GVF VQM
Sbjct: 219 STENMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMSVIKERIEEKRGVFNVQM 273

Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by eIF-2B.

Xenopus laevis (taxid: 8355)

>sp|Q5R493|IF2A_PONAB Eukaryotic translation initiation factor 2 subunit 1 OS=Pongo abelii GN=EIF2S1 PE=2 SV=1

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/55 (65%), Positives = 41/55 (74%)

Query: 2   STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQM 56
           STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK KIE+  GVF VQM
Sbjct: 219 STENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQM 273

Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by eIF-2B.

Pongo abelii (taxid: 9601)

>sp|P68101|IF2A_RAT Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus GN=Eif2s1 PE=1 SV=2

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/55 (65%), Positives = 41/55 (74%)

Query: 2   STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQM 56
           STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK KIE+  GVF VQM
Sbjct: 219 STETMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMAVIKEKIEEKRGVFNVQM 273

Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by eIF-2B.

Rattus norvegicus (taxid: 10116)

>sp|Q6ZWX6|IF2A_MOUSE Eukaryotic translation initiation factor 2 subunit 1 OS=Mus musculus GN=Eif2s1 PE=1 SV=3

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/55 (65%), Positives = 41/55 (74%)

Query: 2   STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQM 56
           STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK KIE+  GVF VQM
Sbjct: 219 STETMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMAVIKEKIEEKRGVFNVQM 273

Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by eIF-2B.

Mus musculus (taxid: 10090)

>sp|P68102|IF2A_BOVIN Eukaryotic translation initiation factor 2 subunit 1 OS=Bos taurus GN=EIF2S1 PE=2 SV=2

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/55 (65%), Positives = 41/55 (74%)

Query: 2   STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQM 56
           STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK KIE+  GVF VQM
Sbjct: 219 STETMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMAVIKEKIEEKRGVFNVQM 273

Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by eIF-2B.

Bos taurus (taxid: 9913)

>sp|P20459|IF2A_YEAST Eukaryotic translation initiation factor 2 subunit alpha OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUI2 PE=1 SV=1

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)

Query: 1   MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQM 56
           MSTE+M +K+ L+A PLYV+TT   +K  G++ L+ AI+ I   I + GGV  + M
Sbjct: 211 MSTEQMQVKVKLVAAPLYVLTTQALDKQKGIEQLESAIEKITEVITKYGGVCNITM 266

eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by eIF-2B.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	82
158287426	361	AGAP011190-PA [Anopheles gambiae str. PE	0.743	0.168	0.737	4e-18
312374549	342	hypothetical protein AND_15792 [Anophele	0.743	0.178	0.737	1e-17
157136899	364	eukaryotic translation initiation factor	0.743	0.167	0.737	3e-17
170050216	341	eukaryotic translation initiation factor	0.743	0.178	0.721	4e-17
389609899	331	eukaryotic translation Initiation Factor	0.743	0.184	0.721	6e-17
322800363	357	hypothetical protein SINV_04235 [Solenop	0.743	0.170	0.704	1e-16
383864031	334	PREDICTED: eukaryotic translation initia	0.743	0.182	0.704	1e-16
380015101	334	PREDICTED: eukaryotic translation initia	0.743	0.182	0.704	1e-16
340717144	334	PREDICTED: eukaryotic translation initia	0.743	0.182	0.688	2e-16
27462592	331	eIF2 alpha subunit [Spodoptera frugiperd	0.743	0.184	0.721	2e-16

>gi|158287426|ref|XP_309455.4| AGAP011190-PA [Anopheles gambiae str. PEST] gi|157019645|gb|EAA05222.4| AGAP011190-PA [Anopheles gambiae str. PEST]

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/61 (73%), Positives = 54/61 (88%)

Query: 1   MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSI 60
           +STE++PIKINLIAPPLYVMTT TPEKADGLKAL+ AI+ IK  IE+LGGVF+VQMA  +
Sbjct: 235 LSTEELPIKINLIAPPLYVMTTSTPEKADGLKALESAIEVIKETIEKLGGVFKVQMAPKV 294

Query: 61  L 61
           +
Sbjct: 295 V 295

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312374549|gb|EFR22084.1| hypothetical protein AND_15792 [Anopheles darlingi]

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/61 (73%), Positives = 53/61 (86%)

Query: 1   MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSI 60
           +STE++PIKINLIAPPLYVMTT TPEKADGLKAL+ AI+ IK  IE LGGVF+VQMA  +
Sbjct: 215 LSTEELPIKINLIAPPLYVMTTSTPEKADGLKALEAAIEKIKETIEGLGGVFKVQMAPKV 274

Query: 61  L 61
           +
Sbjct: 275 V 275

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157136899|ref|XP_001663853.1| eukaryotic translation initiation factor [Aedes aegypti] gi|108869836|gb|EAT34061.1| AAEL013675-PA [Aedes aegypti]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 45/61 (73%), Positives = 53/61 (86%)

Query: 1   MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSI 60
           +STE++PIKINLIAPPLYVMTT TPEKADGLKAL+ AI+ IK  IE LGGVF+VQMA  +
Sbjct: 241 LSTEELPIKINLIAPPLYVMTTSTPEKADGLKALEVAIEKIKETIENLGGVFKVQMAPKV 300

Query: 61  L 61
           +
Sbjct: 301 V 301

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170050216|ref|XP_001859687.1| eukaryotic translation initiation factor 2 alpha subunit [Culex quinquefasciatus] gi|167871730|gb|EDS35113.1| eukaryotic translation initiation factor 2 alpha subunit [Culex quinquefasciatus]

 Score = 91.7 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/61 (72%), Positives = 54/61 (88%)

Query: 1   MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSI 60
           +STE++PIKINLIAPPLYVMTT TPEKADGLKAL+ AI+ I+  IE+LGGVF+VQMA  +
Sbjct: 215 LSTEELPIKINLIAPPLYVMTTSTPEKADGLKALETAIEKIQESIEKLGGVFKVQMAPKV 274

Query: 61  L 61
           +
Sbjct: 275 V 275

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|389609899|dbj|BAM18561.1| eukaryotic translation Initiation Factor 2alpha [Papilio xuthus]

 Score = 91.3 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 44/61 (72%), Positives = 51/61 (83%)

Query: 1   MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSI 60
           +ST++MPIKINLIAPPLYVMTT TPEK DGLKALQ+AID IK  I Q GGVF +QMA  +
Sbjct: 216 LSTQEMPIKINLIAPPLYVMTTSTPEKTDGLKALQDAIDKIKETITQSGGVFNIQMAPKV 275

Query: 61  L 61
           +
Sbjct: 276 V 276

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322800363|gb|EFZ21367.1| hypothetical protein SINV_04235 [Solenopsis invicta]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/61 (70%), Positives = 52/61 (85%)

Query: 1   MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSI 60
           +ST+++PIKINLIAPPLYVMTT TPEK DGLKAL +AI+ I+ KI  LGGVFQVQMA  +
Sbjct: 227 LSTDELPIKINLIAPPLYVMTTSTPEKQDGLKALSDAIEVIQNKITSLGGVFQVQMAPKV 286

Query: 61  L 61
           +
Sbjct: 287 V 287

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383864031|ref|XP_003707483.1| PREDICTED: eukaryotic translation initiation factor 2 subunit 1-like [Megachile rotundata]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/61 (70%), Positives = 51/61 (83%)

Query: 1   MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSI 60
           +ST+++PIKINLIAPPLYVMTT TPEK DGLKAL +AID I+ KI  LGGVF VQMA  +
Sbjct: 217 LSTDELPIKINLIAPPLYVMTTSTPEKQDGLKALSDAIDVIQNKITSLGGVFNVQMAPKV 276

Query: 61  L 61
           +
Sbjct: 277 V 277

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380015101|ref|XP_003691549.1| PREDICTED: eukaryotic translation initiation factor 2 subunit 1-like [Apis florea]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/61 (70%), Positives = 51/61 (83%)

Query: 1   MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSI 60
           +ST+++PIKINLIAPPLYVMTT TPEK DGLKAL +AID I+ KI  LGGVF VQMA  +
Sbjct: 217 LSTDELPIKINLIAPPLYVMTTSTPEKQDGLKALNDAIDAIQNKITSLGGVFNVQMAPKV 276

Query: 61  L 61
           +
Sbjct: 277 V 277

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340717144|ref|XP_003397047.1| PREDICTED: eukaryotic translation initiation factor 2 subunit 1-like [Bombus terrestris]

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/61 (68%), Positives = 52/61 (85%)

Query: 1   MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSI 60
           +ST+++PIKINLIAPPLYV+TT TPEK DGLKAL +AID I++KI  LGGVF VQMA  +
Sbjct: 217 LSTDELPIKINLIAPPLYVITTSTPEKQDGLKALNDAIDAIQSKITSLGGVFNVQMAPKV 276

Query: 61  L 61
           +
Sbjct: 277 V 277

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|27462592|gb|AAO15491.1|AF447395_1 eIF2 alpha subunit [Spodoptera frugiperda]

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/61 (72%), Positives = 50/61 (81%)

Query: 1   MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSI 60
           +ST  +PIKINLIAPPLYVMTT TPEKADGLKALQ+AID IK  I+  GGVF VQMA  +
Sbjct: 216 LSTVDLPIKINLIAPPLYVMTTSTPEKADGLKALQDAIDKIKETIDAAGGVFNVQMAPKV 275

Query: 61  L 61
           +
Sbjct: 276 V 276

Source: Spodoptera frugiperda

Species: Spodoptera frugiperda

Genus: Spodoptera

Family: Noctuidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	82
UNIPROTKB|H0YJS4	252	EIF2S1 "Eukaryotic translation	0.768	0.25	0.597	7.9e-14
UNIPROTKB|G3V4T5	273	EIF2S1 "Eukaryotic translation	0.670	0.201	0.654	2.2e-13
FB|FBgn0261609	341	eIF-2alpha "eukaryotic transla	0.743	0.178	0.590	2.3e-13
UNIPROTKB|Q5ZLX2	315	EIF2S1 "Eukaryotic translation	0.731	0.190	0.6	3.8e-13
UNIPROTKB|P05198	315	EIF2S1 "Eukaryotic translation	0.731	0.190	0.6	3.8e-13
UNIPROTKB|Q5R493	315	EIF2S1 "Eukaryotic translation	0.731	0.190	0.6	3.8e-13
UNIPROTKB|P68102	315	EIF2S1 "Eukaryotic translation	0.731	0.190	0.6	4.9e-13
UNIPROTKB|E2RL17	315	EIF2S1 "Uncharacterized protei	0.731	0.190	0.6	4.9e-13
UNIPROTKB|F2Z5J8	315	EIF2S1 "Eukaryotic translation	0.731	0.190	0.6	4.9e-13
MGI|MGI:95299	315	Eif2s1 "eukaryotic translation	0.731	0.190	0.6	4.9e-13

UNIPROTKB|H0YJS4 EIF2S1 "Eukaryotic translation initiation factor 2 subunit 1" [Homo sapiens (taxid:9606)]

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 40/67 (59%), Positives = 47/67 (70%)

Query:     2 STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAV--- 58
             STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK KIE+  GVF VQM V   
Sbjct:   176 STENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQMEVRSI 235

Query:    59 -SILLMS 64
              S L+M+
Sbjct:   236 DSFLIMT 242

GO:0003743 "translation initiation factor activity" evidence=IEA

GO:0005850 "eukaryotic translation initiation factor 2 complex" evidence=IEA

UNIPROTKB|G3V4T5 EIF2S1 "Eukaryotic translation initiation factor 2 subunit 1" [Homo sapiens (taxid:9606)]

 Score = 175 (66.7 bits), Expect = 2.2e-13, P = 2.2e-13
 Identities = 36/55 (65%), Positives = 41/55 (74%)

Query:     2 STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQM 56
             STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK KIE+  GVF VQM
Sbjct:   219 STENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQM 273

GO:0003743 "translation initiation factor activity" evidence=IEA

GO:0005850 "eukaryotic translation initiation factor 2 complex" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0010494 "cytoplasmic stress granule" evidence=IEA

GO:0043558 "regulation of translational initiation in response to stress" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

FB|FBgn0261609 eIF-2alpha "eukaryotic translation Initiation Factor 2alpha" [Drosophila melanogaster (taxid:7227)]

 Score = 179 (68.1 bits), Expect = 2.3e-13, P = 2.3e-13
 Identities = 36/61 (59%), Positives = 48/61 (78%)

Query:     1 MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSI 60
             +STE++PI+INLIAPPLYVMTT T +K DGLKAL+ AI+ I+AK  +  G F+V MA  +
Sbjct:   216 LSTEELPIRINLIAPPLYVMTTSTTKKTDGLKALEVAIEHIRAKTSEYDGEFKVIMAPKL 275

Query:    61 L 61
             +
Sbjct:   276 V 276

GO:0003743 "translation initiation factor activity" evidence=IGI;ISS;NAS

GO:0005829 "cytosol" evidence=ISS

GO:0006413 "translational initiation" evidence=ISS

GO:0005850 "eukaryotic translation initiation factor 2 complex" evidence=ISS;NAS

GO:0005525 "GTP binding" evidence=NAS

GO:0000049 "tRNA binding" evidence=NAS

GO:0001677 "formation of translation initiation ternary complex" evidence=NAS

GO:0005851 "eukaryotic translation initiation factor 2B complex" evidence=ISS

GO:0007052 "mitotic spindle organization" evidence=IMP

GO:0000022 "mitotic spindle elongation" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

UNIPROTKB|Q5ZLX2 EIF2S1 "Eukaryotic translation initiation factor 2 subunit 1" [Gallus gallus (taxid:9031)]

 Score = 176 (67.0 bits), Expect = 3.8e-13, P = 3.8e-13
 Identities = 36/60 (60%), Positives = 43/60 (71%)

Query:     2 STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSIL 61
             STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK KIE+  GVF VQM   ++
Sbjct:   219 STENMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMAVIKEKIEEKRGVFNVQMEPKVV 278

GO:0005850 "eukaryotic translation initiation factor 2 complex" evidence=IEA

GO:0003743 "translation initiation factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005851 "eukaryotic translation initiation factor 2B complex" evidence=IEA

GO:0010494 "cytoplasmic stress granule" evidence=IEA

GO:0043022 "ribosome binding" evidence=IEA

GO:0043558 "regulation of translational initiation in response to stress" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

UNIPROTKB|P05198 EIF2S1 "Eukaryotic translation initiation factor 2 subunit 1" [Homo sapiens (taxid:9606)]

 Score = 176 (67.0 bits), Expect = 3.8e-13, P = 3.8e-13
 Identities = 36/60 (60%), Positives = 43/60 (71%)

Query:     2 STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSIL 61
             STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK KIE+  GVF VQM   ++
Sbjct:   219 STENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQMEPKVV 278

GO:0005850 "eukaryotic translation initiation factor 2 complex" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0043558 "regulation of translational initiation in response to stress" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005851 "eukaryotic translation initiation factor 2B complex" evidence=IDA

GO:0003743 "translation initiation factor activity" evidence=IDA

GO:0043022 "ribosome binding" evidence=IDA

GO:0010494 "cytoplasmic stress granule" evidence=ISS

GO:0005844 "polysome" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006412 "translation" evidence=TAS

GO:0006413 "translational initiation" evidence=TAS

GO:0006987 "activation of signaling protein activity involved in unfolded protein response" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

UNIPROTKB|Q5R493 EIF2S1 "Eukaryotic translation initiation factor 2 subunit 1" [Pongo abelii (taxid:9601)]

 Score = 176 (67.0 bits), Expect = 3.8e-13, P = 3.8e-13
 Identities = 36/60 (60%), Positives = 43/60 (71%)

Query:     2 STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSIL 61
             STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK KIE+  GVF VQM   ++
Sbjct:   219 STENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQMEPKVV 278

GO:0010494 "cytoplasmic stress granule" evidence=ISS

UNIPROTKB|P68102 EIF2S1 "Eukaryotic translation initiation factor 2 subunit 1" [Bos taurus (taxid:9913)]

 Score = 175 (66.7 bits), Expect = 4.9e-13, P = 4.9e-13
 Identities = 36/60 (60%), Positives = 43/60 (71%)

Query:     2 STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSIL 61
             STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK KIE+  GVF VQM   ++
Sbjct:   219 STETMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMAVIKEKIEEKRGVFNVQMEPKVV 278

GO:0005634 "nucleus" evidence=ISS

GO:0043558 "regulation of translational initiation in response to stress" evidence=ISS

GO:0006412 "translation" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005851 "eukaryotic translation initiation factor 2B complex" evidence=ISS

GO:0003743 "translation initiation factor activity" evidence=ISS

GO:0010494 "cytoplasmic stress granule" evidence=ISS

GO:0043022 "ribosome binding" evidence=ISS

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0005850 "eukaryotic translation initiation factor 2 complex" evidence=IEA

UNIPROTKB|E2RL17 EIF2S1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 175 (66.7 bits), Expect = 4.9e-13, P = 4.9e-13
 Identities = 36/60 (60%), Positives = 43/60 (71%)

Query:     2 STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSIL 61
             STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK KIE+  GVF VQM   ++
Sbjct:   219 STETMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMAVIKEKIEEKRGVFNVQMEPKVV 278

GO:0005850 "eukaryotic translation initiation factor 2 complex" evidence=IEA

GO:0003743 "translation initiation factor activity" evidence=IEA

UNIPROTKB|F2Z5J8 EIF2S1 "Eukaryotic translation initiation factor 2 subunit 1" [Sus scrofa (taxid:9823)]

 Score = 175 (66.7 bits), Expect = 4.9e-13, P = 4.9e-13
 Identities = 36/60 (60%), Positives = 43/60 (71%)

Query:     2 STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSIL 61
             STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK KIE+  GVF VQM   ++
Sbjct:   219 STETMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMAVIKEKIEEKRGVFNVQMEPKVV 278

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0043558 "regulation of translational initiation in response to stress" evidence=IEA

GO:0043022 "ribosome binding" evidence=IEA

GO:0010494 "cytoplasmic stress granule" evidence=IEA

GO:0005851 "eukaryotic translation initiation factor 2B complex" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005850 "eukaryotic translation initiation factor 2 complex" evidence=IEA

GO:0003743 "translation initiation factor activity" evidence=IEA

MGI|MGI:95299 Eif2s1 "eukaryotic translation initiation factor 2, subunit 1 alpha" [Mus musculus (taxid:10090)]

 Score = 175 (66.7 bits), Expect = 4.9e-13, P = 4.9e-13
 Identities = 36/60 (60%), Positives = 43/60 (71%)

Query:     2 STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSIL 61
             STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK KIE+  GVF VQM   ++
Sbjct:   219 STETMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMAVIKEKIEEKRGVFNVQMEPKVV 278

GO:0003723 "RNA binding" evidence=IEA

GO:0003743 "translation initiation factor activity" evidence=ISO

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005850 "eukaryotic translation initiation factor 2 complex" evidence=IEA

GO:0006412 "translation" evidence=IDA

GO:0006413 "translational initiation" evidence=IEA

GO:0006417 "regulation of translation" evidence=IEA

GO:0010494 "cytoplasmic stress granule" evidence=IDA

GO:0043022 "ribosome binding" evidence=ISO

GO:0043558 "regulation of translational initiation in response to stress" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P68101	IF2A_RAT	No assigned EC number	0.6545	0.6707	0.1746	yes	N/A
P41374	IF2A_DROME	No assigned EC number	0.6315	0.6951	0.1671	yes	N/A
P05198	IF2A_HUMAN	No assigned EC number	0.6545	0.6707	0.1746	yes	N/A
P68102	IF2A_BOVIN	No assigned EC number	0.6545	0.6707	0.1746	yes	N/A
Q6ZWX6	IF2A_MOUSE	No assigned EC number	0.6545	0.6707	0.1746	yes	N/A
Q6GL89	IF2A_XENTR	No assigned EC number	0.6363	0.6707	0.1746	yes	N/A
Q5ZLX2	IF2A_CHICK	No assigned EC number	0.6545	0.6707	0.1746	yes	N/A
Q5R493	IF2A_PONAB	No assigned EC number	0.6545	0.6707	0.1746	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	82
PTZ00248	319	PTZ00248, PTZ00248, eukaryotic translation initiat	6e-15
COG1093	269	COG1093, SUI2, Translation initiation factor 2, al	5e-09
pfam07541	112	pfam07541, EIF_2_alpha, Eukaryotic translation ini	4e-07

>gnl|CDD|240329 PTZ00248, PTZ00248, eukaryotic translation initiation factor 2 subunit 1; Provisional

 Score = 67.0 bits (164), Expect = 6e-15
 Identities = 21/59 (35%), Positives = 36/59 (61%)

Query: 2   STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSI 60
           +T++  I I LIAPP YV+ T   +K  G++ +  A++ IK  I++ GG F+V+    +
Sbjct: 213 ATDECKITIKLIAPPQYVIVTTCSDKDKGMEIIGAALEAIKEVIKKKGGDFKVKGEPEV 271

Length = 319

>gnl|CDD|224018 COG1093, SUI2, Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis]

 Score = 50.4 bits (121), Expect = 5e-09
 Identities = 11/56 (19%), Positives = 24/56 (42%)

Query: 1   MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQM 56
              E++ +K+  +  P Y +    P+     + L++A +     I++LGG      
Sbjct: 206 NGEEEVELKVYYVGAPRYRIDVQAPDYKKAEEVLEKAAEAAIKTIKKLGGEGTFIR 261

Length = 269

>gnl|CDD|219460 pfam07541, EIF_2_alpha, Eukaryotic translation initiation factor 2 alpha subunit

 Score = 43.7 bits (104), Expect = 4e-07
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 2   STEKMPIKINLIAPPLYVMTTVTPEK 27
           STE +PIKI  +  P Y +T   P+ 
Sbjct: 87  STEDVPIKIKYVGAPRYRITVTAPDY 112

These proteins share a region of similarity that falls towards the C terminus from pfam00575. Length = 112

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	82
KOG2916|consensus	304		99.95
PTZ00248	319	eukaryotic translation initiation factor 2 subunit	99.87
PRK03987	262	translation initiation factor IF-2 subunit alpha;	99.57
COG1093	269	SUI2 Translation initiation factor 2, alpha subuni	99.31
cd01271	124	Fe65_C Fe65 C-terminal Phosphotyrosine-binding (PT	90.75

>KOG2916|consensus

Probab=99.95  E-value=4.3e-28  Score=186.93  Aligned_cols=74  Identities=46%  Similarity=0.673  Sum_probs=71.8

Q ss_pred             CCCCCcceEEEEecCCeEEEEeeeCCHHHHHHHHHHHHHHHHHHHhhcCCeEEEEeceeEeeccccchhhhccc
Q psy18081          1 MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSILLMSMIQNSQTDLF   74 (82)
Q Consensus         1 ~ste~~~IkIkLIApPlYvltt~tlDK~~Gi~~L~~Aie~I~~~I~~~gG~~~Vk~~PkvVse~d~~~l~~~~~   74 (82)
                      +||++|||||+|||||+|||||+|+||++|+++|++||+.|.+.|+++||.|+|+|+||+||++|+++|++.|=
T Consensus       210 ~~te~~piki~LIApPlYVlTT~tldK~~g~e~l~~Ai~~i~~~I~~~~G~~~V~~~pk~vte~d~~~l~~~~e  283 (304)
T KOG2916|consen  210 LSTEECPIKIKLIAPPLYVLTTQTLDKTKGLEVLEEAIEVIISKIEEYGGTFTVIMEPKLVTETDEAELARRME  283 (304)
T ss_pred             CCcccCceEEEEecCceEEEEEeeccccccHHHHHHHHHHHHHHHHhhCCEEEEEeCCeecccccHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999653

>PTZ00248 eukaryotic translation initiation factor 2 subunit 1; Provisional

Probab=99.87  E-value=4e-22  Score=155.01  Aligned_cols=71  Identities=31%  Similarity=0.481  Sum_probs=68.1

Q ss_pred             CCCCcceEEEEecCCeEEEEeeeCCHHHHHHHHHHHHHHHHHHHhhcCCeEEEEeceeEeeccccchhhhcc
Q psy18081          2 STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSILLMSMIQNSQTDL   73 (82)
Q Consensus         2 ste~~~IkIkLIApPlYvltt~tlDK~~Gi~~L~~Aie~I~~~I~~~gG~~~Vk~~PkvVse~d~~~l~~~~   73 (82)
                      ++++++|+|+|||||+|+|+++|+||..|+++|++|+++|++.|+++||+|+++++||+||++|+++ +.+|
T Consensus       213 ~~~~~~i~i~~igaP~Y~i~~~~~d~k~g~~~l~~a~~~i~~~i~~~gG~~~~~~~p~~v~~~~~~~-~~~~  283 (319)
T PTZ00248        213 ATDECKITIKLIAPPQYVIVTTCSDKDKGMEIIGAALEAIKEVIKKKGGDFKVKGEPEVVGGDEEDL-EELL  283 (319)
T ss_pred             CCCcCcEEEEEEcCCeEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEECCEEecchhHHH-HHHH
Confidence            6778999999999999999999999999999999999999999999999999999999999999998 6665

>PRK03987 translation initiation factor IF-2 subunit alpha; Validated

Probab=99.57  E-value=1e-14  Score=110.27  Aligned_cols=56  Identities=21%  Similarity=0.335  Sum_probs=53.8

Q ss_pred             CCCCcceEEEEecCCeEEEEeeeCCHHHHHHHHHHHHHHHHHHHhhcCCeEEEEec
Q psy18081          2 STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMA   57 (82)
Q Consensus         2 ste~~~IkIkLIApPlYvltt~tlDK~~Gi~~L~~Aie~I~~~I~~~gG~~~Vk~~   57 (82)
                      ++++++|+|+||+||+|+|+++|+|+..|+++|++|+++|.+.|+++||+|+++..
T Consensus       205 ~~~~~~v~i~~ig~P~Y~i~~~~~d~k~~~~~l~~~~~~~~~~i~~~gg~~~~~r~  260 (262)
T PRK03987        205 KYEDVEVEIYYVGAPRYRIDVTAPDYKTAEKALKKIAERAIKVIKKLGGEGSFVRE  260 (262)
T ss_pred             CCCCCcEEEEEECCCeEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEEe
Confidence            67899999999999999999999999999999999999999999999999999854

>COG1093 SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis]

Probab=99.31  E-value=9.4e-12  Score=95.79  Aligned_cols=63  Identities=17%  Similarity=0.305  Sum_probs=59.7

Q ss_pred             CCCCcceEEEEecCCeEEEEeeeCCHHHHHHHHHHHHHHHHHHHhhcCCeEEEEeceeEeecc
Q psy18081          2 STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSILLMS   64 (82)
Q Consensus         2 ste~~~IkIkLIApPlYvltt~tlDK~~Gi~~L~~Aie~I~~~I~~~gG~~~Vk~~PkvVse~   64 (82)
                      ++++++++|.+|++|+|+++++.+|+.+|.+.|++|++.+.+.|+++||.+.+.++|+.+++.
T Consensus       207 ~~~~v~~kv~~VgaPrYri~v~a~dykkaee~l~~a~~~~~~~ikk~gg~~~~~r~~k~~~~~  269 (269)
T COG1093         207 GEEEVELKVYYVGAPRYRIDVQAPDYKKAEEVLEKAAEAAIKTIKKLGGEGTFIREPKLVGEA  269 (269)
T ss_pred             CccceeEEEEEecCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecccccccC
Confidence            456789999999999999999999999999999999999999999999999999999999863

>cd01271 Fe65_C Fe65 C-terminal Phosphotyrosine-binding (PTB) domain

Probab=90.75  E-value=0.44  Score=33.44  Aligned_cols=50  Identities=20%  Similarity=0.261  Sum_probs=36.1

Q ss_pred             EEEeeeCCHHHHHHHHHHHHHHHHHHHhhcC-CeEEEEeceeEeeccccch
Q psy18081         19 VMTTVTPEKADGLKALQEAIDTIKAKIEQLG-GVFQVQMAVSILLMSMIQN   68 (82)
Q Consensus        19 vltt~tlDK~~Gi~~L~~Aie~I~~~I~~~g-G~~~Vk~~PkvVse~d~~~   68 (82)
                      -+-.+.-+|-.|+++|++||+.+..+..... =...|.-+|--++..+...
T Consensus         8 yLG~~~V~~p~Gmdvln~AI~~l~~~~~~~~w~~V~vsvaps~v~v~~~~~   58 (124)
T cd01271           8 YLGMLPVDKPTGMEILNSAIDNLMSSSNKEDWLSVNVNVAPSTITVISEKN   58 (124)
T ss_pred             EeccEeecCCccHHHHHHHHHHHHhcCCcccCceEEEEeCCceEEEEccCc
Confidence            4556778899999999999999998775432 3455666777777655443

Fe65 C-terminal Phosphotyrosine-binding (PTB) domain. Fe65 is an amyloid beta A4 precursor (APP) protein-binding. It contains an N-terminal WW domain followed by two PTB domains. The C-terminal PTB domain is responsible for APP binding. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	82
1q8k_A	308	Solution Structure Of Alpha Subunit Of Human Eif2 L		2e-14

>pdb|1Q8K|A Chain A, Solution Structure Of Alpha Subunit Of Human Eif2 Length = 308

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/55 (65%), Positives = 41/55 (74%)
Query: 2   STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQM 56
           STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK KIE+  GVF VQM
Sbjct: 216 STENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQM 270

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	82
1q8k_A	308	Eukaryotic translation initiation factor 2 subunit	9e-17
1yz7_A	188	Probable translation initiation factor 2 alpha sub	2e-16
3cw2_C	266	Translation initiation factor 2 subunit alpha; AIF	4e-16
3aev_A	275	Translation initiation factor 2 subunit alpha; pro	7e-16

>1q8k_A Eukaryotic translation initiation factor 2 subunit 1; NMR {Homo sapiens} SCOP: a.60.14.1 b.40.4.5 d.58.51.1 Length = 308

 Score = 71.5 bits (175), Expect = 9e-17
 Identities = 36/56 (64%), Positives = 41/56 (73%)

Query: 2   STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMA 57
           STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK KIE+  GVF VQM 
Sbjct: 216 STENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQME 271

>1yz7_A Probable translation initiation factor 2 alpha subunit; helical domain, alpha-beta domain; 2.26A {Pyrococcus abyssi} Length = 188

 Score = 68.7 bits (168), Expect = 2e-16
 Identities = 9/56 (16%), Positives = 21/56 (37%)

Query: 2   STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMA 57
             + + +K   +  P Y +    P+     + L+   + I   I++ GG   +   
Sbjct: 121 KEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVLESIAEEILRVIKEAGGEATLLRK 176

>3cw2_C Translation initiation factor 2 subunit alpha; AIF2, intact AIF2, initiation factor 2 alpha subunit, initiation factor 2 beta subunit; 2.80A {Sulfolobus solfataricus} PDB: 2aho_B 3v11_B* Length = 266

 Score = 69.2 bits (169), Expect = 4e-16
 Identities = 11/55 (20%), Positives = 19/55 (34%)

Query: 2   STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQM 56
               + IKI  I  P Y +  V     +  +AL + I  +    ++      V  
Sbjct: 211 YESLLNIKIYTIGAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISVVK 265

>3aev_A Translation initiation factor 2 subunit alpha; proteins-rRNA complex, 16S rRNA, RNA-binding; 2.80A {Pyrococcus horikoshii} PDB: 1yz6_A Length = 275

 Score = 68.5 bits (167), Expect = 7e-16
 Identities = 10/56 (17%), Positives = 21/56 (37%)

Query: 2   STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMA 57
             + + +K      P Y +    P+     + L++  + I   I+Q GG   +   
Sbjct: 208 KEKDIEVKFTYQGAPRYRIDITAPDYYKAEEVLEDIAEEILRVIKQAGGEATLLRK 263

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	82
1q8k_A	308	Eukaryotic translation initiation factor 2 subunit	99.88
1yz7_A	188	Probable translation initiation factor 2 alpha sub	99.77
2qn6_B	93	Translation initiation factor 2 alpha subunit; ini	99.75
3cw2_C	266	Translation initiation factor 2 subunit alpha; AIF	99.55
3aev_A	275	Translation initiation factor 2 subunit alpha; pro	99.51
1xhj_A	88	Nitrogen fixation protein NIFU; alpha-beta, NIFU-l	80.36

>1q8k_A Eukaryotic translation initiation factor 2 subunit 1; NMR {Homo sapiens} SCOP: a.60.14.1 b.40.4.5 d.58.51.1

Probab=99.88  E-value=4.4e-23  Score=157.44  Aligned_cols=75  Identities=48%  Similarity=0.658  Sum_probs=72.2

Q ss_pred             CCCCCcceEEEEecCCeEEEEeeeCCHHHHHHHHHHHHHHHHHHHhhcCCeEEEEeceeEeeccccchhhhcccc
Q psy18081          1 MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSILLMSMIQNSQTDLFN   75 (82)
Q Consensus         1 ~ste~~~IkIkLIApPlYvltt~tlDK~~Gi~~L~~Aie~I~~~I~~~gG~~~Vk~~PkvVse~d~~~l~~~~~~   75 (82)
                      +++++++|+|+||+||+|+|+++|+||++|+++|++|+++|++.|+++||+|+++++||+||++|+++|+++|=+
T Consensus       215 ~~~~~~~i~i~~v~~P~Y~i~~~~~d~k~~~~~l~~~~~~i~~~i~~~gG~~~~~~~p~~v~~~~~~~~~~~~~~  289 (308)
T 1q8k_A          215 CSTENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQMER  289 (308)
T ss_dssp             SSBTTBCEEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHHHHHHHTTSCEECCSSCCEECCSSHHHHHHHHCCS
T ss_pred             ccCcCccEEEEEECCCEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEECCEecChhhHHHHHHHHHH
Confidence            468899999999999999999999999999999999999999999999999999999999999999999999854

>1yz7_A Probable translation initiation factor 2 alpha subunit; helical domain, alpha-beta domain; 2.26A {Pyrococcus abyssi}

Probab=99.77  E-value=9.3e-19  Score=126.39  Aligned_cols=61  Identities=15%  Similarity=0.271  Sum_probs=57.5

Q ss_pred             CCCCcceEEEEecCCeEEEEeeeCCHHHHHHHHHHHHHHHHHHHhhcCCeEEEEeceeEee
Q psy18081          2 STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSILL   62 (82)
Q Consensus         2 ste~~~IkIkLIApPlYvltt~tlDK~~Gi~~L~~Aie~I~~~I~~~gG~~~Vk~~PkvVs   62 (82)
                      ++++++|+|+||+||+|+|+++|+||..|+++|++|++.|++.|+++||+|+|+++++.+-
T Consensus       121 ~~~~~~ikI~lvgaP~Y~i~~~~~Dkk~g~~~L~~aie~i~~~I~~~gG~~~v~r~~~~~~  181 (188)
T 1yz7_A          121 KEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVLESIAEEILRVIKEAGGEATLLRKEKRIK  181 (188)
T ss_dssp             TSTTCEEEEEECSTTEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCCC--
T ss_pred             CCCCCcEEEEEEcCcEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEEcHHHHH
Confidence            6899999999999999999999999999999999999999999999999999999987653

>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*

Probab=99.75  E-value=1.3e-18  Score=113.95  Aligned_cols=55  Identities=20%  Similarity=0.202  Sum_probs=51.6

Q ss_pred             CCCCcc----eEEEEecCCeEEEEeeeCCHHHHHHHHHHHHHHHHHHHhhcCCeEEEEe
Q psy18081          2 STEKMP----IKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQM   56 (82)
Q Consensus         2 ste~~~----IkIkLIApPlYvltt~tlDK~~Gi~~L~~Aie~I~~~I~~~gG~~~Vk~   56 (82)
                      ++++++    |+|+||+||+|+|+++|+||+.|+++|++|++.|++.|+++||+|+++.
T Consensus        34 ~~~~~~~~~~vkI~~vgaP~Y~i~~~~~D~k~ge~~L~~ai~~i~~~i~~~gG~~~v~R   92 (93)
T 2qn6_B           34 IEQDYESLLNIKIYTIGAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISVVK   92 (93)
T ss_dssp             HHHHCTTEEEEEEEESSTTEEEEEEEESCHHHHHHHHHHHHHHHHHHHHHTTEEEEECC
T ss_pred             cccccCccceEEEEEEcCCeEEEEEEecCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEE
Confidence            456676    9999999999999999999999999999999999999999999999864

>3cw2_C Translation initiation factor 2 subunit alpha; AIF2, intact AIF2, initiation factor 2 alpha subunit, initiation factor 2 beta subunit; 2.80A {Sulfolobus solfataricus} PDB: 2aho_B 3v11_B*

Probab=99.55  E-value=6.5e-15  Score=109.66  Aligned_cols=55  Identities=20%  Similarity=0.202  Sum_probs=52.5

Q ss_pred             CCCCcc----eEEEEecCCeEEEEeeeCCHHHHHHHHHHHHHHHHHHHhhcCCeEEEEe
Q psy18081          2 STEKMP----IKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQM   56 (82)
Q Consensus         2 ste~~~----IkIkLIApPlYvltt~tlDK~~Gi~~L~~Aie~I~~~I~~~gG~~~Vk~   56 (82)
                      ++++++    |+|+||+||+|+|+++|+|+++|+++|++|+++|++.|+++||+|++++
T Consensus       207 ~~~~~~~~~~i~i~~v~~P~Y~i~~~~~d~k~~~~~l~~~~~~~~~~i~~~~g~~~~~r  265 (266)
T 3cw2_C          207 IEQDYESLLNIKIYTIGAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISVVK  265 (266)
T ss_dssp             CTTTSCSEEEEECBBSSSSEEEEEEEESCHHHHHHHHHHHHHHHHHHHTTTTCCEEECC
T ss_pred             cccccCccceEEEEEEcCCEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEE
Confidence            577887    9999999999999999999999999999999999999999999999875

>3aev_A Translation initiation factor 2 subunit alpha; proteins-rRNA complex, 16S rRNA, RNA-binding; 2.80A {Pyrococcus horikoshii} PDB: 1yz6_A

Probab=99.51  E-value=1.4e-15  Score=114.17  Aligned_cols=59  Identities=17%  Similarity=0.274  Sum_probs=0.0

Q ss_pred             CCCCcceEEEEecCCeEEEEeeeCCHHHHHHHHHHHHHHHHHHHhhcCCeEEEEeceeE
Q psy18081          2 STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSI   60 (82)
Q Consensus         2 ste~~~IkIkLIApPlYvltt~tlDK~~Gi~~L~~Aie~I~~~I~~~gG~~~Vk~~Pkv   60 (82)
                      ++++++|+|+||+||+|+|+++|+|+++|+++|++|++.|++.|+++||+|+++.++.-
T Consensus       208 ~~~~~~i~i~~v~~P~Y~i~~~~~d~k~~~~~l~~~~~~~~~~i~~~gg~~~~~r~~~~  266 (275)
T 3aev_A          208 KEKDIEVKFTYQGAPRYRIDITAPDYYKAEEVLEDIAEEILRVIKQAGGEATLLRKEKR  266 (275)
T ss_dssp             -----------------------------------------------------------
T ss_pred             cCCCCCEEEEEECCCEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEEcHHH
Confidence            57889999999999999999999999999999999999999999999999999988753

>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1

Probab=80.36  E-value=2.2  Score=27.02  Aligned_cols=26  Identities=15%  Similarity=0.270  Sum_probs=23.4

Q ss_pred             HHHHHHHHHHHHHHHhhcCCeEEEEe
Q psy18081         31 LKALQEAIDTIKAKIEQLGGVFQVQM   56 (82)
Q Consensus        31 i~~L~~Aie~I~~~I~~~gG~~~Vk~   56 (82)
                      ++.++++|+.||-.+.+.||.+.+..
T Consensus         9 ~~~I~~~L~~IRP~L~~dGGdvelv~   34 (88)
T 1xhj_A            9 FDQVAEVIERLRPFLLRDGGDCTLVD   34 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCEEEEEE
T ss_pred             HHHHHHHHHHhcHHHHhcCCeEEEEE
Confidence            67899999999999999999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	82
d1q8ka2	117	d.58.51.1 (A:186-302) eIF-2-alpha, C-terminal doma	4e-19
d2qn6b1	89	d.58.51.1 (B:176-264) eIF-2-alpha, C-terminal doma	3e-13

>d1q8ka2 d.58.51.1 (A:186-302) eIF-2-alpha, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: eIF-2-alpha, C-terminal domain
family: eIF-2-alpha, C-terminal domain
domain: eIF-2-alpha, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.5 bits (178), Expect = 4e-19
 Identities = 36/56 (64%), Positives = 41/56 (73%)

Query: 2  STEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMA 57
          STE MPIKINLIAPP YVMTT T E+ +GL  L +A+  IK KIE+  GVF VQM 
Sbjct: 33 STENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQME 88

>d2qn6b1 d.58.51.1 (B:176-264) eIF-2-alpha, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]} Length = 89

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: eIF-2-alpha, C-terminal domain
family: eIF-2-alpha, C-terminal domain
domain: eIF-2-alpha, C-terminal domain
species: Sulfolobus solfataricus [TaxId: 2287]

 Score = 57.1 bits (138), Expect = 3e-13
 Identities = 11/52 (21%), Positives = 19/52 (36%)

Query: 3  TEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQV 54
             + IKI  I  P Y +  V     +  +AL + I  +    ++      V
Sbjct: 37 ESLLNIKIYTIGAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISV 88

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	82
d1q8ka2	117	eIF-2-alpha, C-terminal domain {Human (Homo sapien	99.94
d2qn6b1	89	eIF-2-alpha, C-terminal domain {Sulfolobus solfata	99.64
d1xhja_	88	Nitrogen fixation protein NifU homolog SE0630 {Sta	82.34

>d1q8ka2 d.58.51.1 (A:186-302) eIF-2-alpha, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: eIF-2-alpha, C-terminal domain
family: eIF-2-alpha, C-terminal domain
domain: eIF-2-alpha, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.5e-28  Score=163.03  Aligned_cols=75  Identities=48%  Similarity=0.658  Sum_probs=72.2

Q ss_pred             CCCCCcceEEEEecCCeEEEEeeeCCHHHHHHHHHHHHHHHHHHHhhcCCeEEEEeceeEeeccccchhhhcccc
Q psy18081          1 MSTEKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQMAVSILLMSMIQNSQTDLFN   75 (82)
Q Consensus         1 ~ste~~~IkIkLIApPlYvltt~tlDK~~Gi~~L~~Aie~I~~~I~~~gG~~~Vk~~PkvVse~d~~~l~~~~~~   75 (82)
                      +|+++++|+|+||+||+|+|+++|+||+.|+++|++|+++|++.|+++||+|+|+|+||+||++|+++|+.+|=.
T Consensus        32 ~s~e~~~I~I~~igaP~Y~i~v~a~D~k~g~~~l~~a~~~i~~~I~~~gG~f~ik~~pk~v~~~d~~~l~~~me~  106 (117)
T d1q8ka2          32 CSTENMPIKINLIAPPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQMER  106 (117)
T ss_dssp             SSBTTBCEEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHHHHHHHTTSCEECCSSCCEECCSSHHHHHHHHCCS
T ss_pred             cCCCCCcEEEEEECCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEECCEEeccccHHHHHHHHHH
Confidence            378899999999999999999999999999999999999999999999999999999999999999999999853

>d2qn6b1 d.58.51.1 (B:176-264) eIF-2-alpha, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: eIF-2-alpha, C-terminal domain
family: eIF-2-alpha, C-terminal domain
domain: eIF-2-alpha, C-terminal domain
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=99.64  E-value=2.1e-16  Score=101.22  Aligned_cols=52  Identities=21%  Similarity=0.225  Sum_probs=49.8

Q ss_pred             CCcceEEEEecCCeEEEEeeeCCHHHHHHHHHHHHHHHHHHHhhcCCeEEEE
Q psy18081          4 EKMPIKINLIAPPLYVMTTVTPEKADGLKALQEAIDTIKAKIEQLGGVFQVQ   55 (82)
Q Consensus         4 e~~~IkIkLIApPlYvltt~tlDK~~Gi~~L~~Aie~I~~~I~~~gG~~~Vk   55 (82)
                      ++.+|+|+|++||+|+++++++|+..|.++|++|+++|++.|+++||+|+|.
T Consensus        38 ~d~~i~i~~igaP~Yri~v~a~D~k~ae~~l~~a~~~i~~~ik~~gg~~~vv   89 (89)
T d2qn6b1          38 SLLNIKIYTIGAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISVV   89 (89)
T ss_dssp             TEEEEEEEESSTTEEEEEEEESCHHHHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred             CCccEEEEEecCCeEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCEEEeC
Confidence            5678999999999999999999999999999999999999999999999873

>d1xhja_ d.52.8.1 (A:) Nitrogen fixation protein NifU homolog SE0630 {Staphylococcus epidermidis [TaxId: 1282]}

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Fe-S cluster assembly (FSCA) domain-like
family: NifU C-terminal domain-like
domain: Nitrogen fixation protein NifU homolog SE0630
species: Staphylococcus epidermidis [TaxId: 1282]

Probab=82.34  E-value=0.64  Score=27.94  Aligned_cols=30  Identities=17%  Similarity=0.280  Sum_probs=25.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHhhcCCeEEEE
Q psy18081         26 EKADGLKALQEAIDTIKAKIEQLGGVFQVQ   55 (82)
Q Consensus        26 DK~~Gi~~L~~Aie~I~~~I~~~gG~~~Vk   55 (82)
                      ++..=++.++++|+.||-.+.+.||.+.+.
T Consensus         4 ~~~~l~~~I~~vLe~IRP~l~~dGGdvelv   33 (88)
T d1xhja_           4 ENPTMFDQVAEVIERLRPFLLRDGGDCTLV   33 (88)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHHHSCEEEEE
T ss_pred             CcHHHHHHHHHHHHHhhHHHHhCCCcEEEE
Confidence            455557889999999999999999999886