Psyllid ID: psy1833

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-----
Protein Sequence
MHLTQILLRGARKYPKGNIFRGKYRIVEPVTHLRKAIKIEEFKIEERNMFLLRHPYLTEEEELVHLKDLDRNENFRRERRALKLQKFIKHTKLTDHLSDRGKPLK
Secondary Structure (PSIPRED)
cHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHcccHHHHHHHHHHHHHHHHHHHccccccccHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHccccccccccEEEccEEEEccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHcccHHHHHHHHHHHHHHHHHHHcHcccHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MHLTQILLRgarkypkgnifrgkyrivepVTHLRKAIKIEEFKIEERNMfllrhpylteeeelvhlkdldrneNFRRERRALKLQKFIKhtkltdhlsdrgkplk
Flexible Loop (DISEMBL)
mhltqillrgarkypkgnifrgkyrivepvthlrKAIKIEEFKIEERNMFLLRhpylteeeelvhlkdldrnenfRRERRALKlqkfikhtkltdhlsdrgkplk
Low Complexity Region (SEG)
MHLTQILLRGARKYPKGNIFRGKYRIVEPVTHLRkaikieefkieeRNMFLLRHPYLTEEEELVHLKDLDRNENFRRERRALKLQKFIKHTKLTDHLSDRGKPLK
Disordered region (IsUnstruct)
****QILLRGARKYPKGNIFRGKYRIVEPVTHLRKAIKIEEFKIEERNMFLLRHPYLTEEEELVHLKDLD**********ALKLQKFIK****************
Disordered Region (DISOPRED)
MHLTQILLRGARKYPKGNIFRGKYRIVEPVTHLRKAIKIEEFKIEERNMFLLRHPYLT**************ENFRRERRALKLQKFIKHTKLTDHLSDR*****
Disordered Region (DISEMBL)
MHLTQILLRGARKYPKGNIFRGKYRIVEPVTHLRKAIKIEEFKIEERNMFLLRHPYLTEEEELVHLKDLDRNENFRRERRALKLQKFIKHTKLTD**********
Disordered Region (DISPRO)
*HLTQILLRGARKYPKGNIFRGKYRIVEPVTHLRKAIKIEEFKIEERNMFLLRHPYLTEEEELVHLKDLDRNENFRRERRALKLQKFIKHTKLTDHLS*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MHLTQILLRGARKYPKGNIFRGKYRIVEPVTHLRKAIKIEEFKIEERNMFLLRHPYLTEEEELVHLKDLDRNENFRRERRALKLQKFIKHTKLTDHLSDRGKPLK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	105	2.2.26 [Sep-21-2011]
Q9CQF8	102	Ribosomal protein 63, mit	yes	N/A	0.876	0.901	0.340	0.0004

>sp|Q9CQF8|RT63_MOUSE Ribosomal protein 63, mitochondrial OS=Mus musculus GN=Mrp63 PE=2 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 5/97 (5%)

Query: 1  MHLTQILLRGARKYPKGNIFRGKYRIVEPVTHLRKAIKIEEFKIEERNMFLLRHPYLTEE 60
          M LT +LLRG  + P G  + GK+R    V+   K   I   ++E  N + L  PY+T E
Sbjct: 1  MFLTAVLLRG--RIP-GRQWIGKHRRPRTVSFQAKESMIRRLEVEAENHYWLSMPYMTAE 57

Query: 61 EELVHLKDLDRNENFRRERRALKLQKFIKHTKLTDHL 97
          +E  H  +  R + F    +A    KF KH  + D L
Sbjct: 58 QECGHAAE-RRAQAF-EAIKAAATSKFPKHRYIADQL 92

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	105
328702455	106	PREDICTED: ribosomal protein 63, mitocho	0.904	0.896	0.438	3e-13
357628305	106	hypothetical protein KGM_14411 [Danaus p	0.666	0.660	0.493	6e-07
332024821	110	Ribosomal protein 63, mitochondrial [Acr	0.742	0.709	0.445	1e-06
3947670	106	EG:63B12.11 [Drosophila melanogaster]	0.695	0.688	0.44	3e-06
20128893	106	CG14817 [Drosophila melanogaster] gi|729	0.695	0.688	0.44	3e-06
195132981	106	GI21440 [Drosophila mojavensis] gi|19390	0.695	0.688	0.44	3e-06
195347737	106	GM18946 [Drosophila sechellia] gi|195564	0.695	0.688	0.426	9e-06
194912704	106	GG12674 [Drosophila erecta] gi|190648235	0.695	0.688	0.426	1e-05
195477934	106	GE17002 [Drosophila yakuba] gi|194187870	0.695	0.688	0.426	1e-05
195469824	106	GE16502 [Drosophila yakuba] gi|194187360	0.695	0.688	0.426	2e-05

>gi|328702455|ref|XP_003241907.1| PREDICTED: ribosomal protein 63, mitochondrial-like [Acyrthosiphon pisum]

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 3/98 (3%)

Query: 1  MHLTQILLRGARKYPKGNIFRGKYRIVEPVTHLRKAIKIEEFKIEERNMFLLRHPYLTEE 60
          M LT +L     K P+G+IF+GK+R+V+PVT L    K+ + + EE+NMF LRH YLT E
Sbjct: 1  MRLTDVLWT---KLPRGHIFKGKHRLVKPVTGLDIHKKLRDLQREEQNMFYLRHSYLTRE 57

Query: 61 EELVHLKDLDRNENFRRERRALKLQKFIKHTKLTDHLS 98
          E   H ++  R E + R+ + L+ +KF KH  + +HLS
Sbjct: 58 ESYGHSQEQGRFEKWMRKWKVLQAEKFGKHKSIENHLS 95

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357628305|gb|EHJ77694.1| hypothetical protein KGM_14411 [Danaus plexippus]

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 5/75 (6%)

Query: 1  MHLTQILLRGARKYPKGNIFRGKYRIVEPVT--HLRKAIKIEEFKIEERNMFLLRHPYLT 58
          M L+ IL R     P G+IFRGK R+V+ V   HLR+    ++F +EE+NMF LRHPYLT
Sbjct: 1  MKLSSILFR-RNLLPNGHIFRGKDRLVKRVEPKHLRQLE--QDFTVEEQNMFYLRHPYLT 57

Query: 59 EEEELVHLKDLDRNE 73
          E E   H K L + E
Sbjct: 58 EAESYGHSKALGKQE 72

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332024821|gb|EGI65009.1| Ribosomal protein 63, mitochondrial [Acromyrmex echinatior]

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 5/83 (6%)

Query: 20  FRGKYRIVE-PVTHLRKAIKIEEFKIEERNMFLLRHPYLTEEEELVHLKDL---DRNENF 75
           FRGKYRIV+ P  H    +K ++F+ EE+NM +LRHPYLT E+   H+KD+    R +NF
Sbjct: 20  FRGKYRIVKKPSMHDLLKMK-KDFEREEQNMLILRHPYLTVEQSQGHMKDMYPKTRKQNF 78

Query: 76  RRERRALKLQKFIKHTKLTDHLS 98
             + RA   QKF K   + + L 
Sbjct: 79  LEKVRAENRQKFQKEITIAERLC 101

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|3947670|emb|CAA15941.1| EG:63B12.11 [Drosophila melanogaster]

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 1  MHLTQILLRGARKYPKGNIFRGKYRIVEPVTHLRKAIKIEEFKIEERNMFLLRHPYLTEE 60
          MHLT I L   +K   G+IFRGK R+V+PV+         E++ +E+ M LLRHPYLT E
Sbjct: 1  MHLTLINL--FKKTVPGHIFRGKRRLVKPVSQRAMDTLTREYERQEQVMLLLRHPYLTME 58

Query: 61 EELVHLKDLDRNENF 75
          +   H K+L + E  
Sbjct: 59 QSFGHAKELQKREKL 73

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|20128893|ref|NP_569953.1| CG14817 [Drosophila melanogaster] gi|7290218|gb|AAF45680.1| CG14817 [Drosophila melanogaster] gi|330340469|gb|AEC11521.1| GM31526p [Drosophila melanogaster]

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 1  MHLTQILLRGARKYPKGNIFRGKYRIVEPVTHLRKAIKIEEFKIEERNMFLLRHPYLTEE 60
          MHLT I L   +K   G+IFRGK R+V+PV+         E++ +E+ M LLRHPYLT E
Sbjct: 1  MHLTLINL--FKKTVPGHIFRGKRRLVKPVSQRAMDTLTHEYERQEQVMLLLRHPYLTME 58

Query: 61 EELVHLKDLDRNENF 75
          +   H K+L + E  
Sbjct: 59 QSFGHAKELQKREKL 73

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195132981|ref|XP_002010918.1| GI21440 [Drosophila mojavensis] gi|193907706|gb|EDW06573.1| GI21440 [Drosophila mojavensis]

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 2/75 (2%)

Query: 1  MHLTQILLRGARKYPKGNIFRGKYRIVEPVTHLRKAIKIEEFKIEERNMFLLRHPYLTEE 60
          M LT  L+   +K   G+IFRGK R+V+PV+       I E++ +E+ MFLLRHPYLT E
Sbjct: 1  MQLT--LINFFKKTVPGHIFRGKRRLVKPVSKRSMDTLIREYERQEQIMFLLRHPYLTLE 58

Query: 61 EELVHLKDLDRNENF 75
          +   H K+L + E  
Sbjct: 59 QSSGHAKELQKREKL 73

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195347737|ref|XP_002040408.1| GM18946 [Drosophila sechellia] gi|195564652|ref|XP_002105928.1| GD16410 [Drosophila simulans] gi|194121836|gb|EDW43879.1| GM18946 [Drosophila sechellia] gi|194203293|gb|EDX16869.1| GD16410 [Drosophila simulans]

 Score = 54.3 bits (129), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 1  MHLTQILLRGARKYPKGNIFRGKYRIVEPVTHLRKAIKIEEFKIEERNMFLLRHPYLTEE 60
          MHLT I L   +K   G+IFRGK R+V+PV+         E++ +E+ M LLRHPYLT E
Sbjct: 1  MHLTLINL--FKKTVPGHIFRGKRRLVKPVSQRAMDTLTREYERQEQVMLLLRHPYLTLE 58

Query: 61 EELVHLKDLDRNENF 75
          +   H K+L + +  
Sbjct: 59 QSFGHAKELQKRDKL 73

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194912704|ref|XP_001982559.1| GG12674 [Drosophila erecta] gi|190648235|gb|EDV45528.1| GG12674 [Drosophila erecta]

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 1  MHLTQILLRGARKYPKGNIFRGKYRIVEPVTHLRKAIKIEEFKIEERNMFLLRHPYLTEE 60
          MHLT I L   +K   G+IFRGK R+V+PV+         E++ +E+ M LLRHPY+T E
Sbjct: 1  MHLTLINL--FKKTVPGHIFRGKRRLVKPVSQRAMDTLTREYERQEQVMLLLRHPYITLE 58

Query: 61 EELVHLKDLDRNENF 75
          +   H K+L + E  
Sbjct: 59 QSSGHAKELQKREKL 73

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195477934|ref|XP_002100346.1| GE17002 [Drosophila yakuba] gi|194187870|gb|EDX01454.1| GE17002 [Drosophila yakuba]

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 1  MHLTQILLRGARKYPKGNIFRGKYRIVEPVTHLRKAIKIEEFKIEERNMFLLRHPYLTEE 60
          MHLT I L   +K   G+IFRGK R+V+PV+         E++ +E+ M LLRHPYLT E
Sbjct: 1  MHLTLINL--FKKTVPGHIFRGKRRLVKPVSQRAMDTLTREYERQEQVMLLLRHPYLTLE 58

Query: 61 EELVHLKDLDRNENF 75
          +   H K+L + +  
Sbjct: 59 QSSGHAKELQKRDKL 73

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195469824|ref|XP_002099836.1| GE16502 [Drosophila yakuba] gi|194187360|gb|EDX00944.1| GE16502 [Drosophila yakuba]

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 1  MHLTQILLRGARKYPKGNIFRGKYRIVEPVTHLRKAIKIEEFKIEERNMFLLRHPYLTEE 60
          MHLT I L   +K   G+IFRGK R+V+PV+         E++ +E+ M LLRHPYLT E
Sbjct: 1  MHLTLINL--FKKTVPGHIFRGKRRLVKPVSQRAMDTLTREYERQEQIMLLLRHPYLTLE 58

Query: 61 EELVHLKDLDRNENF 75
          +   H K+L + +  
Sbjct: 59 QSSGHAKELQKRDKL 73

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	105
UNIPROTKB|E1C178	102	MRP63 "Uncharacterized protein	0.866	0.892	0.35	5.5e-06
MGI|MGI:1915090	102	Mrp63 "mitochondrial ribosomal	0.876	0.901	0.309	0.00057

UNIPROTKB|E1C178 MRP63 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 35/100 (35%), Positives = 48/100 (48%)

Query:     1 MHLTQILLRGARKYPKGNIFRGKYRIVEPVTHLRXXXXXXXXXXXXRNMFLLRHPYLTEE 60
             M LT  LLR  ++ P G  + GKYR    VT                N + L  PYLT +
Sbjct:     1 MFLTLALLR--KRIP-GKQWIGKYRRPRVVTTTMKQAMIRRLEIEAENEYWLSRPYLTRQ 57

Query:    61 EELVHLKD--LDRNENFRRERRALKLQKFIKHTKLTDHLS 98
             EE  H ++  + R E F+    ALK  KF +H  ++DHL+
Sbjct:    58 EECNHNREARVARWEAFK----ALKSSKFPEHRYMSDHLN 93

GO:0003735 "structural constituent of ribosome" evidence=IEA

GO:0005761 "mitochondrial ribosome" evidence=IEA

GO:0006412 "translation" evidence=IEA

MGI|MGI:1915090 Mrp63 "mitochondrial ribosomal protein 63" [Mus musculus (taxid:10090)]

 Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
 Identities = 30/97 (30%), Positives = 42/97 (43%)

Query:     1 MHLTQILLRGARKYPKGNIFRGKYRIVEPVTHLRXXXXXXXXXXXXRNMFLLRHPYLTEE 60
             M LT +LLRG  + P G  + GK+R    V+                N + L  PY+T E
Sbjct:     1 MFLTAVLLRG--RIP-GRQWIGKHRRPRTVSFQAKESMIRRLEVEAENHYWLSMPYMTAE 57

Query:    61 EELVHLKDLDRNENFRRERRALKLQKFIKHTKLTDHL 97
             +E  H  +  R + F   + A    KF KH  + D L
Sbjct:    58 QECGHAAER-RAQAFEAIKAAAT-SKFPKHRYIADQL 92


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.143   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      105        93   0.00091  102 3  11 22  0.44    29
                                                     29  0.41    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  480 (51 KB)
  Total size of DFA:  94 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:02
  No. of threads or processors used:  24
  Search cpu time:  11.55u 0.07s 11.62t   Elapsed:  00:00:02
  Total cpu time:  11.55u 0.07s 11.62t   Elapsed:  00:00:04
  Start:  Thu Aug 15 12:21:25 2013   End:  Thu Aug 15 12:21:29 2013

GO:0003735 "structural constituent of ribosome" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005761 "mitochondrial ribosome" evidence=IDA

GO:0005840 "ribosome" evidence=IEA

GO:0006412 "translation" evidence=IDA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9CQF8	RT63_MOUSE	No assigned EC number	0.3402	0.8761	0.9019	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	105
PF14978	91	MRP-63: Mitochondrial ribosome protein 63	100.0

>PF14978 MRP-63: Mitochondrial ribosome protein 63

Probab=100.00  E-value=1.9e-43  Score=243.19  Aligned_cols=87  Identities=32%  Similarity=0.440  Sum_probs=81.4

Q ss_pred             CCceeeccccccccch--hhhhhhhHHHHHHHHHHHHHHhcCCCCHHHhhhhhHHHhHHHHHHHHHHHHHHcCCCCCchH
Q psy1833          16 KGNIFRGKYRIVEPVT--HLRKAIKIEEFKIEERNMFLLRHPYLTEEEELVHLKDLDRNENFRRERRALKLQKFIKHTKL   93 (105)
Q Consensus        16 ~G~~w~GK~R~~~~vS--~k~~~~~~~~le~E~enm~~Ls~PYLT~EqE~gh~~el~~r~~~~~~~~~~~~~Kf~~H~ti   93 (105)
                      +|+|||||||+|++||  ++++|  +++|+||||||||||+||||+|||+||+++++...+.++.+++++++|||+|+||
T Consensus         1 pG~~w~GKhR~~r~vt~~~k~~~--~~~le~E~eN~~~Ls~PYLT~EQE~gh~~e~r~~k~~~~~~~~~~~~kf~~h~~i   78 (91)
T PF14978_consen    1 PGKQWIGKHRRPRKVTWQMKENM--IRRLEIEEENMYWLSRPYLTAEQEYGHAKERRKEKAFFEWIKEKKRSKFPPHKTI   78 (91)
T ss_pred             CCCcccCcCCCcCCCCHHHHHHH--HHHHHHHHHHHHHHcCCcccHHHHcchHHHHhHHHHHHHHHHHHHHccCCCcccH
Confidence            3999999999999999  99999  9999999999999999999999999999996554478888888889999999999


Q ss_pred             hhhhccCCCCC
Q psy1833          94 TDHLSDRGKPL  104 (105)
Q Consensus        94 ~d~L~hL~~~~  104 (105)
                      +|||+||||+-
T Consensus        79 ~d~L~hL~v~~   89 (91)
T PF14978_consen   79 ADRLNHLNVTK   89 (91)
T ss_pred             HHHHhhhcccC
Confidence            99999999984

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00