Psyllid ID: psy1844

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Protein Sequence
LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP
Secondary Structure (PSIPRED)
ccHHHHHHHHHHccccccccccccEEEEEcccEEEEEEccccHHHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHcccccEEEEEcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHcccccccccccEEEEEEccccEEEEEEccccHHHHHcccccccHHcccEEEEEccccccHHHHHHHHHHHHHccccccEEEcccccccHHHHHHccccccEEEEEcccc
Coil and Loop (DISEMBL)
LNAFFAKEltkyqpisedpkstlnslryrgldgfvaavspfnftaiggnlaytpalmgssvlwkpsdtallsNYTIYKIMIeagvppgvvnfvpadgpvfgdtitaspylaginftgsvp
Flexible Loop (DISEMBL)
lnaffakeltkyqpisedpkstLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP
Low Complexity Region (SEG)
LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP
Disordered region (IsUnstruct)
***********************NSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFT****
Disordered Region (DISOPRED)
LNAFFAKELTKYQPI****KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV*
Disordered Region (DISEMBL)
LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP
Disordered Region (DISPRO)
LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	120	2.2.26 [Sep-21-2011]
A7YWE4	563	Delta-1-pyrroline-5-carbo	yes	N/A	0.983	0.209	0.666	3e-42
P0C2X9	563	Delta-1-pyrroline-5-carbo	yes	N/A	0.983	0.209	0.675	2e-41
P30038	563	Delta-1-pyrroline-5-carbo	yes	N/A	0.983	0.209	0.666	3e-41
Q7SY23	556	Delta-1-pyrroline-5-carbo	yes	N/A	0.983	0.212	0.658	4e-41
Q8CHT0	562	Delta-1-pyrroline-5-carbo	yes	N/A	0.983	0.209	0.666	5e-41
Q9P8I0	572	Delta-1-pyrroline-5-carbo	yes	N/A	0.941	0.197	0.482	4e-26
Q54RA2	558	Delta-1-pyrroline-5-carbo	yes	N/A	0.975	0.209	0.466	1e-25
P07275	575	Delta-1-pyrroline-5-carbo	yes	N/A	0.941	0.196	0.5	8e-25
O74766	548	Probable delta-1-pyrrolin	yes	N/A	0.975	0.213	0.483	3e-24
P78568	546	Delta-1-pyrroline-5-carbo	N/A	N/A	0.933	0.205	0.5	2e-23

>sp|A7YWE4|AL4A1_BOVIN Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH4A1 PE=2 SV=1

 Score =  170 bits (430), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 80/120 (66%), Positives = 98/120 (81%), Gaps = 2/120 (1%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
            NA FA EL   QP+S  P +  NS+ YRGL+GFVAA+SPFNFTAIGGNLA  PALMG+ 
Sbjct: 172 FNAKFAMELEGEQPLSVPPST--NSMLYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNV 229

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTA+L++Y +Y+I+ EAG+PP ++ FVPADGP FGDT+T+S +L GINFTGSVP
Sbjct: 230 VLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVP 289

Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes.
Bos taurus (taxid: 9913)
EC: 1EC: .EC: 5EC: .EC: 1EC: .EC: 1EC: 2

>sp|P0C2X9|AL4A1_RAT Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh4a1 PE=1 SV=1

 Score =  167 bits (422), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 81/120 (67%), Positives = 97/120 (80%), Gaps = 2/120 (1%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
            NA FA EL   QPIS  P +  N + YRGL+GFVAA+SPFNFTAIGGNLA  PALMG+ 
Sbjct: 171 FNAKFAVELEGEQPISVPPST--NHVVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNV 228

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTA+L++Y +Y+I+ EAG+PP V+ FVPADGP FGDT+T+S +L GINFTGSVP
Sbjct: 229 VLWKPSDTAMLASYAVYRILREAGLPPNVIQFVPADGPTFGDTVTSSEHLCGINFTGSVP 288

Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|P30038|AL4A1_HUMAN Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH4A1 PE=1 SV=3

 Score =  166 bits (421), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 80/120 (66%), Positives = 98/120 (81%), Gaps = 2/120 (1%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
            NA +A EL   QPIS  P +  NS  YRGL+GFVAA+SPFNFTAIGGNLA  PALMG+ 
Sbjct: 172 FNAKYAVELEGQQPISVPPST--NSTVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNV 229

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTA+L++Y +Y+I+ EAG+PP ++ FVPADGP+FGDT+T+S +L GINFTGSVP
Sbjct: 230 VLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVP 289

Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q7SY23|AL4A1_DANRE Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Danio rerio GN=aldh4a1 PE=2 SV=1

 Score =  166 bits (420), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 79/120 (65%), Positives = 98/120 (81%), Gaps = 2/120 (1%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
            NA  A EL   QP+  D   + N++ YRGL+GFVAAV+PFNFTAIGGNLA TPALMG+ 
Sbjct: 165 FNAKHAIELEDQQPLDSD--GSTNTMLYRGLEGFVAAVAPFNFTAIGGNLAGTPALMGNV 222

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTA+ ++Y +YKI+ E+G+PP ++ FVPADGPVFGDT+T+S +LAGINFTGSVP
Sbjct: 223 VLWKPSDTAMSASYAVYKILRESGLPPNIIQFVPADGPVFGDTVTSSEHLAGINFTGSVP 282

Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q8CHT0|AL4A1_MOUSE Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh4a1 PE=1 SV=3

 Score =  166 bits (419), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 80/120 (66%), Positives = 96/120 (80%), Gaps = 2/120 (1%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
            NA FA EL   QPIS  P +  N   YRGL+GFVAA+SPFNFTAIGGNLA  PALMG+ 
Sbjct: 171 FNAKFAVELEGEQPISVPPST--NHTVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNV 228

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTA+L++Y +Y+I+ EAG+PP ++ FVPADGP FGDT+T+S +L GINFTGSVP
Sbjct: 229 VLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVP 288

Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q9P8I0|PUT2_EMENI Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=prnC PE=3 SV=2

 Score =  116 bits (290), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 55/114 (48%), Positives = 78/114 (68%), Gaps = 1/114 (0%)

Query: 5   FAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWK 64
           +A++L   QP+   P    N + YR L+GFV A+SPFNFTAIGGNLA  PALMG+ V+WK
Sbjct: 179 YAEDLYAQQPVHHAP-GVWNRVEYRPLEGFVYAISPFNFTAIGGNLAGAPALMGNVVVWK 237

Query: 65  PSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           PS +A+ SN+ +++I++EAG+P  V+ FVP +      T+   P  A ++FTGS
Sbjct: 238 PSPSAIASNWLVHQILLEAGLPKNVIQFVPGEAEEVTKTVLDHPDFAALHFTGS 291

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q54RA2|AL4A1_DICDI Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=DDB_G0283293 PE=3 SV=1

 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/118 (46%), Positives = 83/118 (70%), Gaps = 1/118 (0%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
            N  +A+E+ + QP + +     N L Y+ L+G+V A+SPFNFTAIG NL+  PALMG+ 
Sbjct: 161 FNVKYAQEIYQQQPPA-NSAGCWNILTYQPLEGYVVAISPFNFTAIGLNLSSAPALMGNV 219

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           VLWKP+ TA+LSN+ +YK ++EAG+P GV+ F+P  G + G+ +  +   +G++FTGS
Sbjct: 220 VLWKPASTAVLSNWIVYKALLEAGLPAGVIQFLPGSGRLVGEHLFNNRNFSGLHFTGS 277

Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles.

Dictyostelium discoideum (taxid: 44689)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|P07275|PUT2_YEAST Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUT2 PE=1 SV=2

 Score =  112 bits (279), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 73/114 (64%), Gaps = 1/114 (0%)

Query: 5   FAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWK 64
           +A +L   QP+ E    T N   YR L+GFV AVSPFNFTAI  NL   PALMG++V+WK
Sbjct: 176 YASDLYAQQPV-ESADGTWNKAEYRPLEGFVYAVSPFNFTAIAANLIGAPALMGNTVVWK 234

Query: 65  PSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           PS TA LSNY +  ++ EAG+P GV+NF+P D     D + A      ++FTGS
Sbjct: 235 PSQTAALSNYLLMTVLEEAGLPKGVINFIPGDPVQVTDQVLADKDFGALHFTGS 288

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|O74766|PUT2_SCHPO Probable delta-1-pyrroline-5-carboxylate dehydrogenase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC24C6.04 PE=1 SV=1

 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/118 (48%), Positives = 72/118 (61%), Gaps = 1/118 (0%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
            N  +A EL   QP    P    N + YR L+GFV A++PFNFTAI GNLA  P LMG+ 
Sbjct: 153 FNTKYASELYASQPPENTP-GVWNRMEYRPLEGFVYAITPFNFTAIAGNLAAAPLLMGNV 211

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           VL KPSD A+LS+Y +Y+I  EAG+P G + F+P D           P  AG++FTGS
Sbjct: 212 VLMKPSDHAVLSSYIVYQIFREAGLPAGALQFIPGDAVEVSKVCFNHPEFAGLHFTGS 269

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|P78568|PUT2_AGABI Delta-1-pyrroline-5-carboxylate dehydrogenase OS=Agaricus bisporus GN=pruA PE=3 SV=1

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 73/114 (64%), Gaps = 2/114 (1%)

Query: 5   FAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWK 64
           + +EL   QP    P    N   YR L+GFV AVSPFNFTAIGGNL  +PAL+G+ V+WK
Sbjct: 159 YVEELYAQQPPKNAP-GCWNRTEYRPLEGFVLAVSPFNFTAIGGNLPGSPALVGNVVVWK 217

Query: 65  PSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           P+  A  SNY ++KI+ EAGVPPGV+ F+P    +    I  SP    ++FTGS
Sbjct: 218 PAPAATYSNYLVFKILSEAGVPPGVIQFIPGGAEIVQAAIQ-SPNFRSLHFTGS 270

Agaricus bisporus (taxid: 5341)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	120
328698360	535	PREDICTED: delta-1-pyrroline-5-carboxyla	1.0	0.224	0.9	1e-57
91084231	568	PREDICTED: similar to pyrroline-5-carbox	1.0	0.211	0.85	2e-54
357528293	398	pyrroline-5-carboxylate dehydrogenase [L	1.0	0.301	0.85	4e-54
312375387	613	hypothetical protein AND_14227 [Anophele	1.0	0.195	0.825	1e-53
194876019	574	GG13195 [Drosophila erecta] gi|190655482	1.0	0.209	0.833	1e-53
195377365	569	GJ13456 [Drosophila virilis] gi|19415461	1.0	0.210	0.841	2e-53
195348687	574	GM22106 [Drosophila sechellia] gi|194122	1.0	0.209	0.833	2e-53
195496644	573	GE19517 [Drosophila yakuba] gi|194181881	1.0	0.209	0.833	2e-53
195552912	574	GD17558 [Drosophila simulans] gi|1942021	1.0	0.209	0.833	2e-53
24668413	574	delta-1-Pyrroline-5-carboxylate dehydrog	1.0	0.209	0.833	3e-53

>gi|328698360|ref|XP_001952392.2| PREDICTED: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial-like [Acyrthosiphon pisum]

 Score =  226 bits (576), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 108/120 (90%), Positives = 114/120 (95%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
           LNAFFAKELTKYQPISE+   TLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMG S
Sbjct: 177 LNAFFAKELTKYQPISENKNVTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGCS 236

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTALLSN+ IY+IM EAGVPPGVVNF+PADGPVFGDTITASP+L+GINFTGSVP
Sbjct: 237 VLWKPSDTALLSNWVIYEIMTEAGVPPGVVNFIPADGPVFGDTITASPHLSGINFTGSVP 296

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91084231|ref|XP_969408.1| PREDICTED: similar to pyrroline-5-carboxylate dehydrogenase [Tribolium castaneum] gi|270008791|gb|EFA05239.1| hypothetical protein TcasGA2_TC015385 [Tribolium castaneum]

 Score =  216 bits (549), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 102/120 (85%), Positives = 112/120 (93%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
           LNA+F KE TKYQPISE+PK T NS+RYRG+DGF+AAVSPFNFTAIGGNLAYTPALMG++
Sbjct: 175 LNAYFLKEATKYQPISENPKVTKNSMRYRGIDGFIAAVSPFNFTAIGGNLAYTPALMGNA 234

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           +LWKPSDTALLSN+ I+KI  EAGVPPGVVNFVPADGPVFGDTITAS YLAGINFTGSVP
Sbjct: 235 ILWKPSDTALLSNWVIFKICREAGVPPGVVNFVPADGPVFGDTITASKYLAGINFTGSVP 294

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357528293|gb|AET80385.1| pyrroline-5-carboxylate dehydrogenase [Leptinotarsa decemlineata]

 Score =  214 bits (546), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 102/120 (85%), Positives = 111/120 (92%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
           LNA+F KE TKYQPISE+PK T NS+RYRG+DGF+AAVS FNFTAIGGNLAYTPALMG+S
Sbjct: 175 LNAYFLKEATKYQPISENPKITKNSMRYRGIDGFIAAVSTFNFTAIGGNLAYTPALMGNS 234

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTALLSN+ I+ I  EAGVPPGVVNFVPADGPVFGDTITASP+LAGINFTGSVP
Sbjct: 235 VLWKPSDTALLSNWVIFNICREAGVPPGVVNFVPADGPVFGDTITASPHLAGINFTGSVP 294

Source: Leptinotarsa decemlineata

Species: Leptinotarsa decemlineata

Genus: Leptinotarsa

Family: Chrysomelidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312375387|gb|EFR22772.1| hypothetical protein AND_14227 [Anopheles darlingi]

 Score =  213 bits (542), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 99/120 (82%), Positives = 110/120 (91%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
           +N F+ KE  KYQPISE+PK T NS+R+RG+DGF+AAVSPFNFTAIGGNLAYTPALMG+ 
Sbjct: 220 MNTFYLKEACKYQPISENPKVTKNSIRFRGIDGFIAAVSPFNFTAIGGNLAYTPALMGNG 279

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTALLSNY I+KIM EAGVPPGVVNF+P DGPVFGDTITASP+LAGINFTGSVP
Sbjct: 280 VLWKPSDTALLSNYVIFKIMREAGVPPGVVNFIPTDGPVFGDTITASPHLAGINFTGSVP 339

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194876019|ref|XP_001973699.1| GG13195 [Drosophila erecta] gi|190655482|gb|EDV52725.1| GG13195 [Drosophila erecta]

 Score =  213 bits (541), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 100/120 (83%), Positives = 112/120 (93%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
           +NA+F KE+TKYQPISE+ K T NSLRYRG+DGF+AAVSPFNFTAIGGNL+YTPALMG+ 
Sbjct: 181 MNAYFLKEVTKYQPISENIKVTKNSLRYRGIDGFIAAVSPFNFTAIGGNLSYTPALMGNG 240

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTA+LSN+ I+KIM EAGVP GVVNFVPADGPVFGDTITASP+LAGINFTGSVP
Sbjct: 241 VLWKPSDTAMLSNWIIFKIMREAGVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVP 300

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195377365|ref|XP_002047461.1| GJ13456 [Drosophila virilis] gi|194154619|gb|EDW69803.1| GJ13456 [Drosophila virilis]

 Score =  212 bits (540), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 101/120 (84%), Positives = 110/120 (91%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
           ++AFF KE  KYQPISED K T NSLRYRG+DGF+AAVSPFNFTAIGGNLAYTPALMG++
Sbjct: 176 IHAFFLKECVKYQPISEDLKVTKNSLRYRGIDGFIAAVSPFNFTAIGGNLAYTPALMGNA 235

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTALLSN+ I+ IM EAGVP GVVNFVPADGPVFGDTITASP+LAGINFTGSVP
Sbjct: 236 VLWKPSDTALLSNWRIFNIMREAGVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVP 295

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195348687|ref|XP_002040879.1| GM22106 [Drosophila sechellia] gi|194122389|gb|EDW44432.1| GM22106 [Drosophila sechellia]

 Score =  212 bits (540), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 100/120 (83%), Positives = 112/120 (93%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
           +NA+F KE+TKYQPISE+ K T NSLRYRG+DGF+AAVSPFNFTAIGGNL+YTPALMG+ 
Sbjct: 181 MNAYFLKEITKYQPISENIKVTKNSLRYRGIDGFIAAVSPFNFTAIGGNLSYTPALMGNG 240

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTA+LSN+ I+KIM EAGVP GVVNFVPADGPVFGDTITASP+LAGINFTGSVP
Sbjct: 241 VLWKPSDTAMLSNWIIFKIMREAGVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVP 300

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195496644|ref|XP_002095780.1| GE19517 [Drosophila yakuba] gi|194181881|gb|EDW95492.1| GE19517 [Drosophila yakuba]

 Score =  212 bits (540), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 100/120 (83%), Positives = 112/120 (93%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
           +NA+F KE+TKYQPISE+ K T NSLRYRG+DGF+AAVSPFNFTAIGGNL+YTPALMG+ 
Sbjct: 180 MNAYFLKEVTKYQPISENIKVTKNSLRYRGIDGFIAAVSPFNFTAIGGNLSYTPALMGNG 239

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTA+LSN+ I+KIM EAGVP GVVNFVPADGPVFGDTITASP+LAGINFTGSVP
Sbjct: 240 VLWKPSDTAILSNWIIFKIMREAGVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVP 299

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195552912|ref|XP_002076564.1| GD17558 [Drosophila simulans] gi|194202175|gb|EDX15751.1| GD17558 [Drosophila simulans]

 Score =  212 bits (539), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 100/120 (83%), Positives = 112/120 (93%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
           +NA+F KE+TKYQPISE+ K T NSLRYRG+DGF+AAVSPFNFTAIGGNL+YTPALMG+ 
Sbjct: 181 MNAYFLKEVTKYQPISENIKVTKNSLRYRGIDGFIAAVSPFNFTAIGGNLSYTPALMGNG 240

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTA+LSN+ I+KIM EAGVP GVVNFVPADGPVFGDTITASP+LAGINFTGSVP
Sbjct: 241 VLWKPSDTAMLSNWIIFKIMREAGVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVP 300

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24668413|ref|NP_730695.1| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform A [Drosophila melanogaster] gi|24668417|ref|NP_649368.2| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform B [Drosophila melanogaster] gi|24668425|ref|NP_730698.1| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform D [Drosophila melanogaster] gi|320546182|ref|NP_001189159.1| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform E [Drosophila melanogaster] gi|442634086|ref|NP_001262196.1| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform F [Drosophila melanogaster] gi|7296504|gb|AAF51790.1| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform A [Drosophila melanogaster] gi|23094285|gb|AAN12191.1| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform B [Drosophila melanogaster] gi|23094287|gb|AAN12193.1| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform D [Drosophila melanogaster] gi|211938657|gb|ACJ13225.1| FI08816p [Drosophila melanogaster] gi|318069273|gb|ADV37595.1| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform E [Drosophila melanogaster] gi|440216173|gb|AGB94889.1| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform F [Drosophila melanogaster]

 Score =  212 bits (539), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 100/120 (83%), Positives = 112/120 (93%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
           +NA+F KE+TKYQPISE+ K T NSLRYRG+DGF+AAVSPFNFTAIGGNL+YTPALMG+ 
Sbjct: 181 MNAYFLKEVTKYQPISENIKVTKNSLRYRGIDGFIAAVSPFNFTAIGGNLSYTPALMGNG 240

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTA+LSN+ I+KIM EAGVP GVVNFVPADGPVFGDTITASP+LAGINFTGSVP
Sbjct: 241 VLWKPSDTAMLSNWIIFKIMREAGVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVP 300

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	120
FB|FBgn0037138	574	P5CDh1 "delta-1-Pyrroline-5-ca	1.0	0.209	0.833	3.1e-51
UNIPROTKB|E1C8Z8	551	ALDH4A1 "Uncharacterized prote	0.975	0.212	0.705	1.2e-40
UNIPROTKB|A7YWE4	563	ALDH4A1 "Delta-1-pyrroline-5-c	0.975	0.207	0.689	2.6e-40
UNIPROTKB|I3LNB4	512	ALDH4A1 "Uncharacterized prote	0.975	0.228	0.689	3.3e-40
UNIPROTKB|D2D4A3	512	ALDH4A1 "Mitochondrial aldehyd	0.975	0.228	0.689	6.8e-40
UNIPROTKB|P30038	563	ALDH4A1 "Delta-1-pyrroline-5-c	0.975	0.207	0.689	6.8e-40
UNIPROTKB|J9P2L3	564	TAS1R2 "Taste receptor type 1	0.975	0.207	0.680	8.7e-40
RGD|1624206	563	Aldh4a1 "aldehyde dehydrogenas	0.975	0.207	0.697	8.7e-40
UNIPROTKB|F1LQ99	543	Aldh4a1 "Delta-1-pyrroline-5-c	0.975	0.215	0.697	8.7e-40
UNIPROTKB|P0C2X9	563	Aldh4a1 "Delta-1-pyrroline-5-c	0.975	0.207	0.697	8.7e-40

FB|FBgn0037138 P5CDh1 "delta-1-Pyrroline-5-carboxylate dehydrogenase 1" [Drosophila melanogaster (taxid:7227)]

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 100/120 (83%), Positives = 112/120 (93%)

Query:     1 LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
             +NA+F KE+TKYQPISE+ K T NSLRYRG+DGF+AAVSPFNFTAIGGNL+YTPALMG+ 
Sbjct:   181 MNAYFLKEVTKYQPISENIKVTKNSLRYRGIDGFIAAVSPFNFTAIGGNLSYTPALMGNG 240

Query:    61 VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
             VLWKPSDTA+LSN+ I+KIM EAGVP GVVNFVPADGPVFGDTITASP+LAGINFTGSVP
Sbjct:   241 VLWKPSDTAMLSNWIIFKIMREAGVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVP 300

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0006560 "proline metabolic process" evidence=ISS;IMP

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006561 "proline biosynthetic process" evidence=IEA

GO:0007005 "mitochondrion organization" evidence=IMP

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|E1C8Z8 ALDH4A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 84/119 (70%), Positives = 100/119 (84%)

Query:     2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSV 61
             NA +A EL   QP+S +  ST NS+ YRGL+GFVAAVSPFNFTAIGGNLA TPALMG+ V
Sbjct:   161 NAKYALELQGSQPLSVEA-ST-NSMVYRGLEGFVAAVSPFNFTAIGGNLAGTPALMGNVV 218

Query:    62 LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
             LWKPSDTALLS+Y +YKI++EAG+PP V+ FVPADGPVFGD +T+S +  G+NFTGSVP
Sbjct:   219 LWKPSDTALLSSYAVYKILLEAGLPPNVIQFVPADGPVFGDAVTSSEHFCGLNFTGSVP 277

GO:0006561 "proline biosynthetic process" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

UNIPROTKB|A7YWE4 ALDH4A1 "Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
 Identities = 82/119 (68%), Positives = 99/119 (83%)

Query:     2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSV 61
             NA FA EL   QP+S  P ST NS+ YRGL+GFVAA+SPFNFTAIGGNLA  PALMG+ V
Sbjct:   173 NAKFAMELEGEQPLSVPP-ST-NSMLYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNVV 230

Query:    62 LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
             LWKPSDTA+L++Y +Y+I+ EAG+PP ++ FVPADGP FGDT+T+S +L GINFTGSVP
Sbjct:   231 LWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVP 289

GO:0010133 "proline catabolic process to glutamate" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0006561 "proline biosynthetic process" evidence=IEA

UNIPROTKB|I3LNB4 ALDH4A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
 Identities = 82/119 (68%), Positives = 99/119 (83%)

Query:     2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSV 61
             NA FA EL   QPIS  P ST NS+ YRGL+GFVAA+SPFNFTAIGGNLA  PALMG+ V
Sbjct:   122 NAKFAVELEGQQPISVPP-ST-NSVVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNVV 179

Query:    62 LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
             LWKPSDTA+L++Y +Y+++ EAG+PP ++ FVPADGP FGDT+T+S +L GINFTGSVP
Sbjct:   180 LWKPSDTAMLASYAVYRVLREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVP 238

GO:0042802 "identical protein binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0006561 "proline biosynthetic process" evidence=IEA

UNIPROTKB|D2D4A3 ALDH4A1 "Mitochondrial aldehyde dehydrogenase 4 family member A1 transcript variant ALDH4A1_v6" [Homo sapiens (taxid:9606)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 82/119 (68%), Positives = 99/119 (83%)

Query:     2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSV 61
             NA +A EL   QPIS  P ST NS  YRGL+GFVAA+SPFNFTAIGGNLA  PALMG+ V
Sbjct:   173 NAKYAVELEGQQPISVPP-ST-NSTVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNVV 230

Query:    62 LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
             LWKPSDTA+L++Y +Y+I+ EAG+PP ++ FVPADGP+FGDT+T+S +L GINFTGSVP
Sbjct:   231 LWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVP 289

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=IEA

UNIPROTKB|P30038 ALDH4A1 "Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 82/119 (68%), Positives = 99/119 (83%)

Query:     2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSV 61
             NA +A EL   QPIS  P ST NS  YRGL+GFVAA+SPFNFTAIGGNLA  PALMG+ V
Sbjct:   173 NAKYAVELEGQQPISVPP-ST-NSTVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNVV 230

Query:    62 LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
             LWKPSDTA+L++Y +Y+I+ EAG+PP ++ FVPADGP+FGDT+T+S +L GINFTGSVP
Sbjct:   231 LWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVP 289

GO:0006561 "proline biosynthetic process" evidence=IEA

GO:0009055 "electron carrier activity" evidence=TAS

GO:0010133 "proline catabolic process to glutamate" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=TAS

GO:0006560 "proline metabolic process" evidence=TAS

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=EXP

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0006562 "proline catabolic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0042802 "identical protein binding" evidence=IPI

GO:0019470 "4-hydroxyproline catabolic process" evidence=TAS

UNIPROTKB|J9P2L3 TAS1R2 "Taste receptor type 1 member 2" [Canis lupus familiaris (taxid:9615)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 81/119 (68%), Positives = 98/119 (82%)

Query:     2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSV 61
             NA FA EL   QP+S  P ST NS+ YRGL+GFVAA+SPFNFTAIGGNLA  PALMG+ V
Sbjct:   174 NAKFAVELEGQQPLSVPP-ST-NSVVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNVV 231

Query:    62 LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
             LWKPSDTA+L++Y +Y++  EAG+PP ++ FVPADGP FGDT+T+S +L GINFTGSVP
Sbjct:   232 LWKPSDTAMLASYAVYRVFREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVP 290

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0006561 "proline biosynthetic process" evidence=IEA

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=IEA

RGD|1624206 Aldh4a1 "aldehyde dehydrogenase 4 family, member A1" [Rattus norvegicus (taxid:10116)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 83/119 (69%), Positives = 98/119 (82%)

Query:     2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSV 61
             NA FA EL   QPIS  P ST N + YRGL+GFVAA+SPFNFTAIGGNLA  PALMG+ V
Sbjct:   172 NAKFAVELEGEQPISVPP-ST-NHVVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNVV 229

Query:    62 LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
             LWKPSDTA+L++Y +Y+I+ EAG+PP V+ FVPADGP FGDT+T+S +L GINFTGSVP
Sbjct:   230 LWKPSDTAMLASYAVYRILREAGLPPNVIQFVPADGPTFGDTVTSSEHLCGINFTGSVP 288

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=IEA;ISO

GO:0005739 "mitochondrion" evidence=ISO

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0006561 "proline biosynthetic process" evidence=IEA

GO:0010133 "proline catabolic process to glutamate" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0042802 "identical protein binding" evidence=ISO

UNIPROTKB|F1LQ99 Aldh4a1 "Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial" [Rattus norvegicus (taxid:10116)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 83/119 (69%), Positives = 98/119 (82%)

Query:     2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSV 61
             NA FA EL   QPIS  P ST N + YRGL+GFVAA+SPFNFTAIGGNLA  PALMG+ V
Sbjct:   152 NAKFAVELEGEQPISVPP-ST-NHVVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNVV 209

Query:    62 LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
             LWKPSDTA+L++Y +Y+I+ EAG+PP V+ FVPADGP FGDT+T+S +L GINFTGSVP
Sbjct:   210 LWKPSDTAMLASYAVYRILREAGLPPNVIQFVPADGPTFGDTVTSSEHLCGINFTGSVP 268

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=IEA

GO:0006561 "proline biosynthetic process" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

UNIPROTKB|P0C2X9 Aldh4a1 "Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial" [Rattus norvegicus (taxid:10116)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 83/119 (69%), Positives = 98/119 (82%)

Query:     2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSV 61
             NA FA EL   QPIS  P ST N + YRGL+GFVAA+SPFNFTAIGGNLA  PALMG+ V
Sbjct:   172 NAKFAVELEGEQPISVPP-ST-NHVVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNVV 229

Query:    62 LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
             LWKPSDTA+L++Y +Y+I+ EAG+PP V+ FVPADGP FGDT+T+S +L GINFTGSVP
Sbjct:   230 LWKPSDTAMLASYAVYRILREAGLPPNVIQFVPADGPTFGDTVTSSEHLCGINFTGSVP 288

GO:0006561 "proline biosynthetic process" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7SY23	AL4A1_DANRE	1, ., 5, ., 1, ., 1, 2	0.6583	0.9833	0.2122	yes	N/A
A7YWE4	AL4A1_BOVIN	1, ., 5, ., 1, ., 1, 2	0.6666	0.9833	0.2095	yes	N/A
P30038	AL4A1_HUMAN	1, ., 5, ., 1, ., 1, 2	0.6666	0.9833	0.2095	yes	N/A
Q8CHT0	AL4A1_MOUSE	1, ., 5, ., 1, ., 1, 2	0.6666	0.9833	0.2099	yes	N/A
P0C2X9	AL4A1_RAT	1, ., 5, ., 1, ., 1, 2	0.675	0.9833	0.2095	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	120
cd07123	522	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca	1e-70
TIGR01236	532	TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb	9e-56
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	2e-40
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	3e-26
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	3e-26
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	2e-24
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	4e-23
COG1012	472	COG1012, PutA, NAD-dependent aldehyde dehydrogenas	2e-21
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	7e-20
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	1e-17
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	5e-17
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	1e-16
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	2e-16
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	3e-16
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	4e-16
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	4e-16
PRK11904	1038	PRK11904, PRK11904, bifunctional proline dehydroge	2e-15
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	4e-15
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	6e-15
COG4230	769	COG4230, COG4230, Delta 1-pyrroline-5-carboxylate	6e-15
TIGR01237	511	TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb	9e-15
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	1e-14
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	1e-14
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	2e-14
cd07086	478	cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha	5e-14
PRK11905	1208	PRK11905, PRK11905, bifunctional proline dehydroge	7e-14
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	8e-14
TIGR01804	467	TIGR01804, BADH, glycine betaine aldehyde dehydrog	1e-13
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	1e-13
cd07113	477	cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep	1e-13
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	2e-13
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	3e-13
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	4e-13
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	6e-13
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	7e-13
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	8e-13
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	1e-12
PRK11809	1318	PRK11809, putA, trifunctional transcriptional regu	2e-12
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	2e-12
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	3e-12
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	3e-12
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	4e-12
TIGR01238	500	TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb	5e-12
cd07119	482	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de	7e-12
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	1e-11
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	1e-11
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	2e-11
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	5e-11
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	7e-11
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	8e-11
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	2e-10
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	3e-10
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	4e-10
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	4e-10
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	5e-10
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	6e-10
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	1e-09
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	1e-09
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	2e-09
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	2e-09
cd07143	481	cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al	4e-09
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	5e-09
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	6e-09
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	7e-09
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	8e-09
cd07140	486	cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate	9e-09
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	1e-08
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	2e-08
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	4e-08
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	4e-08
cd07559	480	cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu	5e-08
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	5e-08
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	7e-08
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	1e-07
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	2e-07
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	2e-07
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	3e-07
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	3e-07
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	3e-07
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	4e-07
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	5e-07
cd07117	475	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo	6e-07
cd07116	479	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD	7e-07
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	2e-06
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	3e-06
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	8e-06
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	4e-05
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	6e-05
PRK13968	462	PRK13968, PRK13968, putative succinate semialdehyd	2e-04
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	4e-04
cd07126	489	cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb	8e-04

>gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

 Score =  219 bits (560), Expect = 1e-70
 Identities = 81/120 (67%), Positives = 95/120 (79%), Gaps = 1/120 (0%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
            N  +A+EL   QP+S  P    N L YR L+GFV AVSPFNFTAIGGNLA  PALMG+ 
Sbjct: 141 FNVKYAEELYAQQPLSS-PAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPALMGNV 199

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTA+LSNY +YKI+ EAG+PPGV+NFVP DGPV GDT+ ASP+LAG++FTGS P
Sbjct: 200 VLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTP 259

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522

>gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

 Score =  180 bits (459), Expect = 9e-56
 Identities = 74/119 (62%), Positives = 91/119 (76%), Gaps = 2/119 (1%)

Query: 2   NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSV 61
           NA +A+EL + QPIS       N   YR L+GFV A+SPFNFTAI GNLA  PALMG++V
Sbjct: 142 NAKYARELYEQQPISAPG--EWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALMGNTV 199

Query: 62  LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           +WKPSDTA+LSNY + +I+ EAG+PPGV+NFVP DGP+  DT+ A P LAGI+FTGS P
Sbjct: 200 IWKPSDTAMLSNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTP 258

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score =  139 bits (352), Expect = 2e-40
 Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 2/120 (1%)

Query: 2   NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFT-AIGGNLAYTPALMGSS 60
            A  A  L              N   Y GL G    +SP+NF  AI   +   P  +G++
Sbjct: 126 YARAALRLRYPAVEVVPYPGEDNESFYVGL-GAGVVISPWNFPVAIFTGMIVAPVAVGNT 184

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           V+ KP++ A++  Y +++I  EAG PPGVV F+P  G   G  +T    + GINFTGS+ 
Sbjct: 185 VIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLE 244

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score =  101 bits (253), Expect = 3e-26
 Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 3/117 (2%)

Query: 4   FFAKELTKYQP-ISEDPKSTLNSLRYRGLDGFVAAVSPFNF-TAIGGNLAYTPALMGSSV 61
           ++A+E+ + +    E      N   YR L G  A +SP+NF  AI   +     + G++V
Sbjct: 139 YYAREMLRLRGFPVEMVPGEDNRYVYRPL-GVGAVISPWNFPLAILAGMTTAALVTGNTV 197

Query: 62  LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           + KP++   +    + +I+ EAG+PPGVVNF+P  G   GD +   P +  I FTGS
Sbjct: 198 VLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGS 254

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score =  100 bits (252), Expect = 3e-26
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 5/120 (4%)

Query: 4   FFAKELTKYQP--ISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSS 60
           ++A    K +   +  DP   L   R   L G V A++P+NF  +       PAL  G++
Sbjct: 99  YYAGLARKLEGETLPSDP-GVLAYTRREPL-GVVGAITPWNFPLLLAAWKIAPALAAGNT 156

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           V+ KPS+   L+   + ++  EAG+PPGV+N V   G   GD +   P +  ++FTGS  
Sbjct: 157 VVLKPSELTPLTALLLAELFEEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTE 216

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score = 95.4 bits (238), Expect = 2e-24
 Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 8/122 (6%)

Query: 4   FFAKELTKY--QPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTA--IGGNLAYTPAL-MG 58
           ++A    +   + I       L  +R   L G V A++P+NF        LA  PAL  G
Sbjct: 68  YYAGLARRLHGEVIPSPDPGELAIVRREPL-GVVGAITPWNFPLLLAAWKLA--PALAAG 124

Query: 59  SSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           ++V+ KPS+   L+   + +++ EAG+PPGV+N V  DG   G  + + P +  I+FTGS
Sbjct: 125 NTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGS 184

Query: 119 VP 120
             
Sbjct: 185 TA 186

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score = 91.1 bits (227), Expect = 4e-23
 Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 8/122 (6%)

Query: 4   FFAKELTKYQ--PISEDPKSTLNSLRYRGLDGFVAAVSPFNFTA--IGGNLAYTPAL-MG 58
           + A    K     +          +R   L G V  ++P+NF        LA  PAL  G
Sbjct: 64  YAAGLADKLGGPELPSPDPGGEAYVRREPL-GVVGVITPWNFPLLLAAWKLA--PALAAG 120

Query: 59  SSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           ++V+ KPS+   L+   + +++ EAG+PPGVVN VP  G   G  + + P +  I+FTGS
Sbjct: 121 NTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGS 180

Query: 119 VP 120
             
Sbjct: 181 TA 182

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

 Score = 87.4 bits (217), Expect = 2e-21
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 3/119 (2%)

Query: 4   FFAKELTK-YQPISEDPKSTLNSLRYRGLDGFVAAVSPFNF-TAIGGNLAYTPALMGSSV 61
           ++A+E  +         K +   +R   L G V A++P+NF  A+           G++V
Sbjct: 106 YYAEEARRLEGETIPTDKGSKALVRREPL-GVVGAITPWNFPLALAAWKLAPALAAGNTV 164

Query: 62  LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           + KPS+   LS   + ++  EAG+P GV+N V   G   GD + A P +  I+FTGS  
Sbjct: 165 VLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTA 223

Length = 472

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score = 83.1 bits (206), Expect = 7e-20
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)

Query: 24  NSLRYRGLDGFVAAVSPFNF-TAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIE 82
           N   Y  L G    +SP+NF  AI   +     + G++VL KP+    +      +++ E
Sbjct: 165 NRYFYIPL-GVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEE 223

Query: 83  AGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           AG+P GVVNFVP  G   GD +   P    I FTGS
Sbjct: 224 AGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGS 259

Length = 514

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score = 76.9 bits (190), Expect = 1e-17
 Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)

Query: 33  GFVAAVSPFNF-TAIGG-NLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 89
           G V  ++P+NF  AI    +A  PAL  G++V++KP++    S + + +I+ EAG+P GV
Sbjct: 137 GVVGLITPWNFPIAIPAWKIA--PALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGV 194

Query: 90  VNFVPADGPVFGDTITASPYLAGINFTGSVP 120
            N V   G   G  +   P +  ++FTGS  
Sbjct: 195 FNLVMGSGSEVGQALVEHPDVDAVSFTGSTA 225

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score = 74.9 bits (185), Expect = 5e-17
 Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 9/120 (7%)

Query: 3   AFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNF---TAIGGNLAYTPALM-G 58
           A  A+EL    P    P   LN L   G  G    +SP+NF      G   A   AL  G
Sbjct: 141 AAQARELFS-DPELPGPTGELNGLELHG-RGVFVCISPWNFPLAIFTGQIAA---ALAAG 195

Query: 59  SSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           ++V+ KP++   L      +++ EAGVP  V+  VP DG   G+ + A P + G+ FTGS
Sbjct: 196 NTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGS 255

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score = 73.9 bits (182), Expect = 1e-16
 Identities = 44/128 (34%), Positives = 62/128 (48%), Gaps = 13/128 (10%)

Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRY--RGLDGFVAAVSPFNFTA------IGGNLAY 52
           L A  AK L       +  +     + +  R   G V A++PFNF A      I   +A 
Sbjct: 91  LAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIA- 149

Query: 53  TPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 112
               +G+SV+ KPS    L+   + KI+ EAG+PPGV+N V   G   GD I  +P +  
Sbjct: 150 ----VGNSVVVKPSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNM 205

Query: 113 INFTGSVP 120
           I+FTGS  
Sbjct: 206 ISFTGSTA 213

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score = 73.4 bits (181), Expect = 2e-16
 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 7/92 (7%)

Query: 33  GFVAAVSPFNFTAIGGNLA---YTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 88
           G VAA++PFNF     NL      PA+  G++V+ KP+    LS   + ++++EAG+P G
Sbjct: 125 GVVAAITPFNFPL---NLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKG 181

Query: 89  VVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
            +N V   G   GD +   P +  I+FTGS  
Sbjct: 182 ALNVVTGSGETVGDALVTDPRVRMISFTGSPA 213

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score = 72.6 bits (179), Expect = 3e-16
 Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 2/90 (2%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPS-DTALLSNYTIYKIMIEAGVPPGVV 90
           G V  +SPFNF  I    +  PAL +G++V+ KP   T +     I +I  EAG+P GV+
Sbjct: 100 GVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVL 159

Query: 91  NFVPADGPVFGDTITASPYLAGINFTGSVP 120
           N VP  G   GD +   P +  I+FTGS  
Sbjct: 160 NVVPGGGSEIGDALVEHPRVRMISFTGSTA 189

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score = 72.5 bits (178), Expect = 4e-16
 Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 1/88 (1%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V A+ P+NF  +       PAL  G++V+ KP++   LS   I ++M EAG P GV+N
Sbjct: 119 GVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLN 178

Query: 92  FVPADGPVFGDTITASPYLAGINFTGSV 119
            V   G V G  +   P +  I FTGS 
Sbjct: 179 VVTGFGEVAGAALVEHPDVDKITFTGST 206

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score = 72.4 bits (178), Expect = 4e-16
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 1/89 (1%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G VA ++PFN+  I        AL  G++V+ KPS+   +    I +IM EAG+P GV N
Sbjct: 121 GVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFN 180

Query: 92  FVPADGPVFGDTITASPYLAGINFTGSVP 120
            V   G   GD +   P +  + FTGS  
Sbjct: 181 VVTGGGAEVGDELVDDPRVRMVTFTGSTA 209

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 70.6 bits (174), Expect = 2e-15
 Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 6/99 (6%)

Query: 23  LNSLRYRGLDGFVAAVSPFNFT-AI-GGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKI 79
            N LR  G   FV  +SP+NF  AI  G +A   AL  G++V+ KP++   L      K+
Sbjct: 677 SNELRLHGRGVFVC-ISPWNFPLAIFLGQVA--AALAAGNTVIAKPAEQTPLIAAEAVKL 733

Query: 80  MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           + EAG+P  V+  +P DG   G  +TA P +AG+ FTGS
Sbjct: 734 LHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGS 772

Length = 1038

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score = 69.5 bits (171), Expect = 4e-15
 Identities = 43/106 (40%), Positives = 55/106 (51%), Gaps = 10/106 (9%)

Query: 18  DPKSTLNSLRYRGLDGFVAAVSPFN----FTAIGGNLAYTPAL-MGSSVLWKPSDTALLS 72
           D    LN  R   L G VAA++P+N      A    LA  PAL  G++V+ KPS+    S
Sbjct: 107 DKGDYLNFTRREPL-GVVAAITPWNSPLLLLA--KKLA--PALAAGNTVVLKPSEHTPAS 161

Query: 73  NYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
              + K+  EAG PPGVVN V   GP  G+ +   P +A I FTG 
Sbjct: 162 TLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGG 207

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score = 69.2 bits (170), Expect = 6e-15
 Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 5/91 (5%)

Query: 33  GFVAAVSPFNFTA--IGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 89
           G VA + P+NF    I   LA  PAL+ G++++ KPS+   L+     +++ EAG+P GV
Sbjct: 135 GVVAGILPWNFPFFLIARKLA--PALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGV 192

Query: 90  VNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           +N V   G V GD + A P +  I+ TGS  
Sbjct: 193 LNIVTGRGSVVGDALVAHPKVGMISLTGSTE 223

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

 Score = 69.0 bits (169), Expect = 6e-15
 Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 8/101 (7%)

Query: 22  TLNSLRYRGLDGFVAAVSPFNFT-AI-GGNLAYTPALM-GSSVLWKPSD-TALLSNYTIY 77
           T  +L +R L G V  +SP+NF  AI  G +A   AL  G+SVL KP++ T L++   + 
Sbjct: 228 TFGNLTHRPL-GPVVCISPWNFPLAIFTGQIA--AALAAGNSVLAKPAEQTPLIAAQAV- 283

Query: 78  KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           +++ EAGVPPGV+  +P  G   G  +TA   +AG+ FTGS
Sbjct: 284 RLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGS 324

Length = 769

>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

 Score = 68.7 bits (168), Expect = 9e-15
 Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 4/118 (3%)

Query: 4   FFAKELTKY--QPISEDPKSTLNSLRYRGLDGFVAAVSPFNFT-AIGGNLAYTPALMGSS 60
           ++A+++ +          +   N   Y    G    +SP+NF  AI   +   P + G+ 
Sbjct: 139 YYARQMIELAKGKPVNSREGETNQYVYTPT-GVTVVISPWNFPFAIMVGMTVAPIVTGNC 197

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           V+ KP++ A +      +I+ EAG+P GVV FVP  G   GD +   P  + I FTGS
Sbjct: 198 VVLKPAEAAPVIAAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGS 255

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score = 68.0 bits (167), Expect = 1e-14
 Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 7/92 (7%)

Query: 33  GFVAAVSPFNFTAIGGNLAYT---PAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 88
           G V A+ PFN+     NL  +   PAL MG++V++KP+   +L    + +   +AG P G
Sbjct: 143 GVVLAIGPFNYPL---NLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKG 199

Query: 89  VVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VVN V   G   GD +     +  I+FTGS  
Sbjct: 200 VVNVVTGRGREIGDPLVTHGRIDVISFTGSTE 231

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score = 68.2 bits (168), Expect = 1e-14
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 21/99 (21%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-----------GSSVLWKPSDTALLSNYTIYKIMI 81
           G VAA++P+NF          PA M           G +V+ KP++   LS   + ++  
Sbjct: 119 GVVAAITPWNF----------PAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAE 168

Query: 82  EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           EAG+P GV+N V       G+ + ASP +  I+FTGS  
Sbjct: 169 EAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTA 207

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score = 67.6 bits (166), Expect = 2e-14
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 1/87 (1%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V AV P+NF  +       PAL  G+SV+ KP++ + L+   + ++ +EAG+P GV+N
Sbjct: 126 GVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLPAGVLN 185

Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            VP  G   G+ +     +  + FTGS
Sbjct: 186 VVPGFGHTAGEALGLHMDVDALAFTGS 212

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

 Score = 66.4 bits (163), Expect = 5e-14
 Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 10/95 (10%)

Query: 33  GFVAAVSPFNF-TAIGG-NLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEA----GV 85
           G V  ++ FNF  A+ G N A   AL+ G++V+WKPS+T  L+   + KI+ E     G+
Sbjct: 135 GVVGVITAFNFPVAVPGWNAA--IALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGL 192

Query: 86  PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           PPGVVN V   G   G+ +   P +  ++FTGS  
Sbjct: 193 PPGVVNLVTGGGDG-GELLVHDPRVPLVSFTGSTE 226

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478

>gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 66.0 bits (162), Expect = 7e-14
 Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 7/90 (7%)

Query: 33  GFVAAVSPFNFT-AI-GGNLAYTPALM-GSSVLWKPSD-TALLSNYTIYKIMIEAGVPPG 88
           G V  +SP+NF  AI  G +A   AL+ G++VL KP++ T L++   + +++ EAGVP  
Sbjct: 678 GPVVCISPWNFPLAIFTGQIA--AALVAGNTVLAKPAEQTPLIAARAV-RLLHEAGVPKD 734

Query: 89  VVNFVPADGPVFGDTITASPYLAGINFTGS 118
            +  +P DG   G  + A P +AG+ FTGS
Sbjct: 735 ALQLLPGDGRTVGAALVADPRIAGVMFTGS 764

Length = 1208

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score = 65.8 bits (161), Expect = 8e-14
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 3/88 (3%)

Query: 33  GFVAAVSPFNF-TAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVV 90
           G VA ++P+NF  AI     + PAL+ G++V++KP++        + ++  EAG+PPGVV
Sbjct: 137 GVVALITPWNFPVAIPSWKIF-PALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVV 195

Query: 91  NFVPADGPVFGDTITASPYLAGINFTGS 118
           N V   G   G+ +   P +  ++FTGS
Sbjct: 196 NVVHGRGEEVGEALVEHPDVDVVSFTGS 223

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase

 Score = 65.6 bits (160), Expect = 1e-13
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    +  +N+     +    PAL  G+++++KPS+   L+   + +IM EAG+P GV N
Sbjct: 135 GVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKVAEIMEEAGLPKGVFN 194

Query: 92  FVPADGPVFGDTITASPYLAGINFTGSVP 120
            V  DG   G  +   P +A ++FTG VP
Sbjct: 195 VVQGDGAEVGPLLVNHPDVAKVSFTGGVP 223

Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score = 65.6 bits (161), Expect = 1e-13
 Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 5/89 (5%)

Query: 33  GFVAAVSPFNFTA--IGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 89
           G    ++P+N+    I   +A  PAL  G +V+ KPS+ A LS   + +I+ EAG+P GV
Sbjct: 132 GVCGLITPWNWPLNQIVLKVA--PALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGV 189

Query: 90  VNFVPADGPVFGDTITASPYLAGINFTGS 118
            N V  DGPV G+ ++A P +  ++FTGS
Sbjct: 190 FNLVNGDGPVVGEALSAHPDVDMVSFTGS 218

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

 Score = 65.2 bits (159), Expect = 1e-13
 Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 2/89 (2%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G VA + P+NF+ +        AL  G +++ KPS+   L+   + ++  EAG+P GV+N
Sbjct: 144 GVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLN 203

Query: 92  FVPADGPVFGDTITASPYLAGINFTGSVP 120
            V   G V G  + + P +A ++FTGSV 
Sbjct: 204 VVNGKGAV-GAQLISHPDVAKVSFTGSVA 231

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score = 65.0 bits (159), Expect = 2e-13
 Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 3/88 (3%)

Query: 33  GFVAAVSPFNFTAIGGNLA-YTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVV 90
           G VAA++P+NF     NLA   PAL  G++V+ KP+    LS   + +I+ E  +P GVV
Sbjct: 125 GVVAAITPWNF-PFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPAGVV 183

Query: 91  NFVPADGPVFGDTITASPYLAGINFTGS 118
           N V       G+ +T  P +  ++FTGS
Sbjct: 184 NVVTGSDNAVGEALTTDPRVDMVSFTGS 211

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score = 64.2 bits (157), Expect = 3e-13
 Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)

Query: 25  SLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEA 83
            LR+R   G +A   PFNF     N    PAL+ G++V++KPS+        + ++  EA
Sbjct: 92  VLRHRPH-GVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEA 150

Query: 84  GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119
           G+PPGV+N V       G+ + A   + G+ FTGS 
Sbjct: 151 GLPPGVLNLVQGGRET-GEALAAHEGIDGLLFTGSA 185

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score = 63.6 bits (155), Expect = 4e-13
 Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 5/91 (5%)

Query: 33  GFVAAVSPFNF--TAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 89
           G V A++PFNF    +   LA  PA+  G  V+ KP+    LS   + KI++EAGVP GV
Sbjct: 125 GVVLAITPFNFPLNLVAHKLA--PAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGV 182

Query: 90  VNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           +  V  +  V GD   A   +A ++FTGS  
Sbjct: 183 LQVVTGEREVLGDAFAADERVAMLSFTGSAA 213

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score = 63.4 bits (155), Expect = 6e-13
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 8/91 (8%)

Query: 33  GFVAAVSPFN---FTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 88
           G V  ++P+N    TA+    A  PAL+ G++V+ K S    L          EAG+P G
Sbjct: 118 GVVLIIAPWNYPYLTAVN---AVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEG 174

Query: 89  VVNFVPADGPVFGDTITASPYLAGINFTGSV 119
           V   +          + A P +  ++FTGSV
Sbjct: 175 VFQVLHLSHET-SAALIADPRIDHVSFTGSV 204

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score = 63.2 bits (154), Expect = 7e-13
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 1/89 (1%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V A++P+NF          PAL  G +V+ KPS+   L+     ++ ++AG+PPGV+N
Sbjct: 162 GVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLN 221

Query: 92  FVPADGPVFGDTITASPYLAGINFTGSVP 120
            V  D P  GD + ASP +  I FTGS  
Sbjct: 222 VVMGDAPEIGDALLASPKVRKITFTGSTA 250

Length = 498

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score = 63.0 bits (154), Expect = 8e-13
 Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V  ++P+N   I G  A    L  G++V+ K S+ +  +++ I ++  EAG+P GV+N
Sbjct: 100 GVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLN 159

Query: 92  FV---PADGPVFGDTITASPYLAGINFTGS 118
            V   P D P   + + A P +  +NFTGS
Sbjct: 160 VVTHSPEDAPEVVEALIAHPAVRKVNFTGS 189

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score = 62.2 bits (152), Expect = 1e-12
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    + P+NF  +       PAL  G++V+ KP++   LS   + +++ EAG PPGVVN
Sbjct: 143 GVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVN 202

Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            VP  GP  G  I++   +  I FTGS
Sbjct: 203 IVPGFGPTAGAAISSHMDVDKIAFTGS 229

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 61.9 bits (151), Expect = 2e-12
 Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 5/89 (5%)

Query: 33  GFVAAVSPFNFT-AI-GGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 89
           G V  +SP+NF  AI  G +A   AL  G+SVL KP++   L      +I++EAGVP GV
Sbjct: 770 GPVVCISPWNFPLAIFTGQVA--AALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGV 827

Query: 90  VNFVPADGPVFGDTITASPYLAGINFTGS 118
           V  +P  G   G  + A   + G+ FTGS
Sbjct: 828 VQLLPGRGETVGAALVADARVRGVMFTGS 856

Length = 1318

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score = 61.4 bits (150), Expect = 2e-12
 Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 2/87 (2%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G VAA+ P+N       L   PAL  G +V+ KPS    L  Y + +   EAG+PPGVVN
Sbjct: 139 GVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVN 198

Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            VPAD  V G+ +   P +  ++FTGS
Sbjct: 199 VVPADREV-GEYLVRHPGVDKVSFTGS 224

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score = 61.2 bits (149), Expect = 3e-12
 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 2/68 (2%)

Query: 54  PALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 112
           PAL  G+++++KPS    L+   + +I+ EAG+P GV N V   G   G  +   P +A 
Sbjct: 139 PALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNVVQGGGET-GQLLCEHPDVAK 197

Query: 113 INFTGSVP 120
           ++FTGSVP
Sbjct: 198 VSFTGSVP 205

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score = 61.2 bits (149), Expect = 3e-12
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 3/90 (3%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPS-DTALLSNYTIYKIMIEAGVPPGVV 90
           G V  +SPFNF  I    +  PAL +G++V+ KP   T +     I ++  EAG+P GV+
Sbjct: 112 GVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVL 171

Query: 91  NFVPADGPVFGDTITASPYLAGINFTGSVP 120
           + +P      G+ +   P +A I+FTGS  
Sbjct: 172 HVLPGGADA-GEALVEDPNVAMISFTGSTA 200

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score = 61.2 bits (149), Expect = 4e-12
 Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 2/117 (1%)

Query: 6   AKELTKYQPISED-PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLW 63
           A++L      +   P     +   R   G V  ++P+NF  +       PAL  G +V+ 
Sbjct: 94  AEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVL 153

Query: 64  KPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           KPS+   L+   + +I  EAG+PPGV+N V   G   G  + A P +  I+FTGS  
Sbjct: 154 KPSELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTA 210

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

 Score = 60.7 bits (147), Expect = 5e-12
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 33  GFVAAVSPFNFT-AIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    +SP+NF  AI           G++V+ KP++   L  Y   ++M EAG P G + 
Sbjct: 162 GVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQ 221

Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            +P  G   G  +T+ P +AG+ FTGS
Sbjct: 222 LLPGRGADVGAALTSDPRIAGVAFTGS 248

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500

>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

 Score = 60.4 bits (147), Expect = 7e-12
 Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    ++P+N+  +       PAL  G++V+ KPS+   L+   +++++ EAG+P GVVN
Sbjct: 136 GVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVN 195

Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            V   G   G  +  SP +  ++FTG 
Sbjct: 196 LVTGSGATVGAELAESPDVDLVSFTGG 222

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score = 59.2 bits (144), Expect = 1e-11
 Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 5/91 (5%)

Query: 33  GFVAAVSPFNFTA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 89
           G    + P+N+     G ++A  PAL  G++V+ KP++ A L+   + ++  EAG+P G 
Sbjct: 119 GVTGHIIPWNYPLQITGRSVA--PALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGA 176

Query: 90  VNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           +N V   G   G  + A P +  I+FTGSV 
Sbjct: 177 LNVVTGLGAEAGAALVAHPGVDHISFTGSVE 207

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score = 59.5 bits (145), Expect = 1e-11
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 2/68 (2%)

Query: 54  PAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 112
           PAL  G+++++KPS+   L+   + +I  EAG+P GV N V  DG V G  +T  P +A 
Sbjct: 165 PALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGRV-GAWLTEHPDIAK 223

Query: 113 INFTGSVP 120
           ++FTG VP
Sbjct: 224 VSFTGGVP 231

Length = 488

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score = 59.2 bits (144), Expect = 2e-11
 Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 2/95 (2%)

Query: 28  YRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKP-SDTALLSNYTIYKIMIEAGV 85
           YR   G V  +SP+NF       +  PAL +G++V+ KP SDT +     + KI  EAG+
Sbjct: 127 YREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEEAGL 186

Query: 86  PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           P GV+N V   G   GD     P    I+FTGS P
Sbjct: 187 PKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTP 221

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score = 57.5 bits (140), Expect = 5e-11
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 5/107 (4%)

Query: 15  ISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSN 73
           I +D    +  LR + L G VAA+ P+NF  +       PAL+ G++V+ KPS    L  
Sbjct: 100 IEDDDTRRV-ELRRKPL-GVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCT 157

Query: 74  YTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
             + ++  E  +PPGV+N V     + G  +T+ P +  I+FTGS  
Sbjct: 158 LKLGELAQEV-LPPGVLNVVSGGDEL-GPALTSHPDIRKISFTGSTA 202

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score = 57.6 bits (140), Expect = 7e-11
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 54  PAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 112
           PAL  G++V+ KPS+   L+ + + ++  EAG+PPGVVN V   GP  G  + A P +  
Sbjct: 140 PALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDL 199

Query: 113 INFTGSVP 120
           I+FTG   
Sbjct: 200 ISFTGETA 207

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score = 57.4 bits (139), Expect = 8e-11
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 2/90 (2%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G  AA++P+NF A         AL  G +V+ KP++   LS   + ++  +AG+P GV+N
Sbjct: 119 GVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLN 178

Query: 92  FVPAD-GPVFGDTITASPYLAGINFTGSVP 120
            +        G+ +T SP +  I+FTGS  
Sbjct: 179 VITGSRAKEVGNVLTTSPLVRKISFTGSTN 208

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 56.1 bits (135), Expect = 2e-10
 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 1/87 (1%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G +AA+ P+NF  +       PAL  G+SV+ KPS+ + LS   +  +  EAG+P GV+N
Sbjct: 159 GVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLN 218

Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            V   G   G  ++    +  I FTGS
Sbjct: 219 VVTGFGHEAGQALSRHNDIDAIAFTGS 245

Length = 494

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score = 55.8 bits (135), Expect = 3e-10
 Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 33  GFVAAVSPFN--FTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVV 90
           G VA +  FN         +A  P   G++V+ KP + A LS   + ++  E  +PPGV 
Sbjct: 118 GVVARIVAFNHPLMFAAAKIA-APLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVF 175

Query: 91  NFVPADGPVFGDTITASPYLAGINFTGSVP 120
           N +P DG   G  +   P +  I   GSVP
Sbjct: 176 NILPGDGATAGAALVRHPDVKRIALIGSVP 205

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score = 55.2 bits (134), Expect = 4e-10
 Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 2/89 (2%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G VA ++PFNF A+     +  A+  G++ + KPS+    +   + +++ EAG+P GV+N
Sbjct: 138 GVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLN 197

Query: 92  FVPADGPVFGDTITASPYLAGINFTGSVP 120
            V        + +   P +  ++F GS P
Sbjct: 198 VVHGGKEA-VNALLDHPDIKAVSFVGSTP 225

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score = 55.0 bits (133), Expect = 4e-10
 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 1/87 (1%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    + P+NF  +       PAL  G++V+ KP++   L+   +  ++ EAG PPGVVN
Sbjct: 147 GVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVN 206

Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            VP  GP  G  I++ P +  + FTGS
Sbjct: 207 VVPGYGPTAGAAISSHPDIDKVAFTGS 233

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score = 55.0 bits (133), Expect = 5e-10
 Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 3/94 (3%)

Query: 26  LRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAG 84
           LR+R   G VA   P+NF     N    PAL+ G++V++KPS+          K+  +AG
Sbjct: 130 LRHRPH-GVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAG 188

Query: 85  VPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           +P GV+N V   G   G  + A P + G+ FTGS
Sbjct: 189 LPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGS 221

Length = 487

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score = 54.7 bits (132), Expect = 6e-10
 Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    + P+N+          PAL  G++V+ KP++   LS      ++ EAG PPGVVN
Sbjct: 146 GVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVN 205

Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            +P  G V G  +   P +  I FTGS
Sbjct: 206 IIPGYGAVAGSALAEHPDVDKIAFTGS 232

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score = 53.5 bits (129), Expect = 1e-09
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 3/90 (3%)

Query: 33  GFVAAVSPFNFTA--IGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVV 90
           G V  ++P+NF    +   L +  A  G +V+ KPS+    +   + +++IEAG+P GVV
Sbjct: 121 GVVGIITPWNFPFLILSQKLPFALA-AGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVV 179

Query: 91  NFVPADGPVFGDTITASPYLAGINFTGSVP 120
           N V   G   G  +T  P +  ++FTGS  
Sbjct: 180 NIVTGYGATVGQAMTEHPDVDMVSFTGSTR 209

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score = 53.6 bits (129), Expect = 1e-09
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V  + P+NF  +       PAL MG++V+ KP++   L+     +I  EAG+PPGV+N
Sbjct: 149 GVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLN 208

Query: 92  FVPADGPVFGDTITASPYLAGINFTGSVP 120
            V  +G  FG  +   P +  + FTGS  
Sbjct: 209 IVTGNGS-FGSALANHPGVDKVAFTGSTE 236

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score = 53.0 bits (128), Expect = 2e-09
 Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)

Query: 33  GFVAAVSPFNF-TAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEA----GVPP 87
           G V  ++ FNF  A+ G  A    + G+ V+WKPS T  L+   + KI+       G+P 
Sbjct: 134 GVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPG 193

Query: 88  GVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
            + + V     V G+ +   P +  ++FTGS  
Sbjct: 194 AIASLVCGGADV-GEALVKDPRVPLVSFTGSTA 225

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score = 53.1 bits (128), Expect = 2e-09
 Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 2/88 (2%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G VA ++P+N+  +       PAL  G++V+ KPS+T  L+   + ++  E  +PPGVVN
Sbjct: 120 GVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGVVN 178

Query: 92  FVPADGPVFGDTITASPYLAGINFTGSV 119
            V   G   GD + A P +  ++ TGSV
Sbjct: 179 VVCGGGASAGDALVAHPRVRMVSLTGSV 206

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

 Score = 52.5 bits (126), Expect = 4e-09
 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 3/107 (2%)

Query: 13  QPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALL 71
           Q I  D K  L   R+  + G    + P+NF  +       PAL  G++++ KPS+   L
Sbjct: 128 QVIETDIK-KLTYTRHEPI-GVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPL 185

Query: 72  SNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           S   + K++ EAG PPGV+N V   G   G+ I++   +  + FTGS
Sbjct: 186 SALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGS 232

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score = 52.0 bits (125), Expect = 5e-09
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V  ++P+N+  +       PAL  G + + KPS+ A ++   +  I  E G+PPGV+N
Sbjct: 153 GVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLN 212

Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            V   G   G  + + P +  I FTGS
Sbjct: 213 VVTGLGTEAGAPLASHPGVDKIAFTGS 239

Length = 503

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score = 51.7 bits (124), Expect = 6e-09
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V  ++P+N   +       PAL  G++V+ KP++ + L+   + +I  EAG+P GV N
Sbjct: 137 GPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFN 196

Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            V   G   G  + A P +  ++FTG 
Sbjct: 197 LVHGFGEEAGKALVAHPDVKAVSFTGE 223

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score = 51.6 bits (124), Expect = 7e-09
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 33  GFVAAVSPFNFTAIGGNLAYT---PALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 88
           G V A++PFN      N       PA+   + ++ KPS+   LS   +  ++ EAG+PP 
Sbjct: 122 GVVLAITPFNHPL---NQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPD 178

Query: 89  VVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           +++ V  +    GD +   P +  + FTG V 
Sbjct: 179 MLSVVTGEPGEIGDELITHPDVDLVTFTGGVA 210

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score = 51.4 bits (124), Expect = 8e-09
 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 13/92 (14%)

Query: 33  GFVAAVSPFNF---TAIGGNLAYTPALM-GSSVLWKP-SDTALLSNYTIYKIMIEAGVPP 87
           G V  +SP+N+    A+   +   PAL+ G++V+ KP S T L +   + +++ EAG+P 
Sbjct: 156 GVVGVISPWNYPLTLAVSDAI---PALLAGNAVVLKPDSQTPLTALAAV-ELLYEAGLPR 211

Query: 88  GVVNFVPADGPVFGDTITA-SPYLAGINFTGS 118
            +   V   GPV G  +   + YL    FTGS
Sbjct: 212 DLWQVVTGPGPVVGTALVDNADYLM---FTGS 240

Length = 524

>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

 Score = 51.3 bits (123), Expect = 9e-09
 Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 5/91 (5%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPA---LMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 89
           G    V P+N+  +   LA+  A     G++V+ KP+    L+     ++ ++AG P GV
Sbjct: 149 GVCGIVIPWNYPLM--MLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGV 206

Query: 90  VNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           +N +P  G + G  ++  P +  + FTGS P
Sbjct: 207 INILPGSGSLVGQRLSDHPDVRKLGFTGSTP 237

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score = 51.0 bits (122), Expect = 1e-08
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V  + P+NF  +       PAL  G++++ KP++   LS     K+  EAG+P GV+N
Sbjct: 143 GVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLN 202

Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            V   GP  G  I +   +  + FTGS
Sbjct: 203 IVTGFGPTAGAAIASHMDVDKVAFTGS 229

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score = 50.5 bits (121), Expect = 2e-08
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 2/91 (2%)

Query: 29  RGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPP 87
           R   G V  +SP+N   +       PAL  G++V+ KPS+    +   + ++M   GVP 
Sbjct: 137 RKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPK 196

Query: 88  GVVNFVPADGP-VFGDTITASPYLAGINFTG 117
           GV N V   GP   G+ +T  P +  I FTG
Sbjct: 197 GVYNVVHGFGPDSAGEFLTRHPGVDAITFTG 227

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score = 49.6 bits (119), Expect = 4e-08
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 8/90 (8%)

Query: 33  GFVAAVSPFNFTAIGGNLA---YTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 88
           G V+A++PFNF     NL      PA+  G   + KP+    LS   + +++ E G+P G
Sbjct: 125 GPVSAITPFNFPL---NLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKG 181

Query: 89  VVNFVPADGPVFGDTITASPYLAGINFTGS 118
             + +P       D +     +  ++FTGS
Sbjct: 182 AFSVLPCSRDD-ADLLVTDERIKLLSFTGS 210

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score = 49.3 bits (118), Expect = 4e-08
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 5/91 (5%)

Query: 33  GFVAAVSPFNFT--AIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 89
           G    + P+NF    I   +A  PAL+ G++++ KPS+    +     KI+ E G+P GV
Sbjct: 73  GVTTGILPWNFPFFLIARKMA--PALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGV 130

Query: 90  VNFVPADGPVFGDTITASPYLAGINFTGSVP 120
            N V   G   G  +  +P +A ++ TGSV 
Sbjct: 131 FNLVLGRGETVGQELAGNPKVAMVSMTGSVS 161

Length = 409

>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

 Score = 49.3 bits (118), Expect = 5e-08
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 15  ISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSN 73
           +SE  + TL+   +  L G V  + P+NF  +       PAL  G++V+ KP+    LS 
Sbjct: 121 LSEIDEDTLSYHFHEPL-GVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSI 179

Query: 74  YTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
             + ++ I   +P GVVN V   G   G  + + P +A + FTGS
Sbjct: 180 LVLMEL-IGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGS 223

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score = 49.3 bits (118), Expect = 5e-08
 Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 3/95 (3%)

Query: 25  SLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEA 83
            LR+R   G VA   P+NF     N    PAL+ G++V++KPS+          K+  +A
Sbjct: 127 VLRHRP-HGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKA 185

Query: 84  GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           G+P GV+N V       G  + A P + G+ FTGS
Sbjct: 186 GLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGS 219

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score = 48.8 bits (117), Expect = 7e-08
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 13/94 (13%)

Query: 33  GFVAAVSPFNF---TAIGGNLAYTPALM-GSSVLWKP-SDTALLSNYTIYKIMIEAGVPP 87
           G V  +SP+N+    A+   +   PAL+ G++V+ KP S TAL + + + +++IEAG+P 
Sbjct: 120 GVVGVISPWNYPLTLAVSDAI---PALLAGNAVVLKPDSQTALTALWAV-ELLIEAGLPR 175

Query: 88  GVVNFVPADGPVFGDTITA-SPYLAGINFTGSVP 120
            +   V   G   G  I   + Y+    FTGS  
Sbjct: 176 DLWQVVTGPGSEVGGAIVDNADYVM---FTGSTA 206

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score = 47.9 bits (114), Expect = 1e-07
 Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 5/93 (5%)

Query: 31  LDGFVAAVSPFN--FTAIGGNLAYTPALMGSS-VLWKPSDTALLSNYTIYKIMIEAGVPP 87
           L G ++A++PFN     +   +A  PA+  ++ ++ KPS+   LS   +  I+ EAG+PP
Sbjct: 139 LLGVISAITPFNHPMNQVAHKIA--PAIATNNRMVVKPSEKTPLSALYLADILYEAGLPP 196

Query: 88  GVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
            ++  V  D     D +  +P++  + FTG V 
Sbjct: 197 QMLQVVTGDPREIADELITNPHVDLVTFTGGVA 229

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score = 47.7 bits (114), Expect = 2e-07
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEA-GVPPGVV 90
           G    + P+N   +    +  PAL  G +V+ KP+      N  I +I+ E   +P GVV
Sbjct: 119 GVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVV 178

Query: 91  NFVPADGPVFGDTITASPYLAGINFTGS 118
           N     G      + ASP +  I+FTGS
Sbjct: 179 NLFTESGSEGAAHLVASPDVDVISFTGS 206

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score = 47.6 bits (113), Expect = 2e-07
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G  AA++P+NF A        PAL  G +++ KP+     S   + ++ I AG+P GV N
Sbjct: 148 GVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFN 207

Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            V       G  +T++P +  ++FTGS
Sbjct: 208 VVTGSAGAVGGELTSNPLVRKLSFTGS 234

Length = 482

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 46.8 bits (112), Expect = 3e-07
 Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 2/89 (2%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G VA+++P+N+  +       PAL  G++V+ KPS+   L+   + ++  +  +PPGV+N
Sbjct: 140 GVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLN 198

Query: 92  FVPADGPVFGDTITASPYLAGINFTGSVP 120
            V   G   GD +   P +  ++ TGS+ 
Sbjct: 199 VVTGRGATVGDALVGHPKVRMVSLTGSIA 227

Length = 475

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score = 46.7 bits (111), Expect = 3e-07
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V  + P+NF +    +   PAL  G +++ KP++   LS      +   AGVP GV+N
Sbjct: 160 GVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVIN 219

Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            V   GP  G  I +   +  ++FTGS
Sbjct: 220 VVTGFGPTAGAAIASHMDVDKVSFTGS 246

Length = 501

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score = 46.9 bits (111), Expect = 3e-07
 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G VA+++P+N+  +       PAL  G+ V+ KPS+   L+   + ++  +   P GVVN
Sbjct: 139 GVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVN 197

Query: 92  FVPADGPVFGDTITASPYLAGINFTGSV 119
            +   G   GD +T    +  ++ TGS+
Sbjct: 198 ILFGRGKTVGDPLTGHEKVRMVSLTGSI 225

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score = 46.7 bits (111), Expect = 4e-07
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 7/89 (7%)

Query: 33  GFVAAVSPFNFTAIGGNLAYT---PALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 88
           G V A+ PFN+     NLA +   PAL+ G++V+ KP     ++   +      AG P G
Sbjct: 160 GVVLAIPPFNYPV---NLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKG 216

Query: 89  VVNFVPADGPVFGDTITASPYLAGINFTG 117
           +++ V   G   GD +T  P +  I+FTG
Sbjct: 217 LISCVTGKGSEIGDFLTMHPGVNCISFTG 245

Length = 496

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score = 46.6 bits (111), Expect = 5e-07
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 2/88 (2%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V A+ P+N   +   L   PAL  G++V+ K ++ A L+   + +I+ +  +P GV+N
Sbjct: 119 GVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLN 177

Query: 92  FVPADGPVFGDTITASPYLAGINFTGSV 119
            +   G   G  +   P +  + FTGS 
Sbjct: 178 VITGYGEECGAALVDHPDVDKVTFTGST 205

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

 Score = 46.3 bits (110), Expect = 6e-07
 Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 2/87 (2%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V  + P+NF  +       PAL  G++V+ KPS T  LS   + KI I+  +P GVVN
Sbjct: 138 GVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKI-IQDVLPKGVVN 196

Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            V   G   G+ +   P L  + FTGS
Sbjct: 197 IVTGKGSKSGEYLLNHPGLDKLAFTGS 223

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475

>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

 Score = 45.9 bits (109), Expect = 7e-07
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V  + P+NF  +       PAL  G+ V+ KP++    S   + ++ I   +PPGVVN
Sbjct: 138 GVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMEL-IGDLLPPGVVN 196

Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            V   G   G  + +S  +A + FTG 
Sbjct: 197 VVNGFGLEAGKPLASSKRIAKVAFTGE 223

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score = 44.8 bits (106), Expect = 2e-06
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    + P+NF  +       PAL  G++++ K ++   LS     K++ EAG+PPGV+N
Sbjct: 197 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLN 256

Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            V   GP  G  + +   +  + FTGS
Sbjct: 257 VVSGFGPTAGAALASHMDVDKLAFTGS 283

Length = 538

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score = 44.1 bits (104), Expect = 3e-06
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 2/89 (2%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G  A ++PFNF A+     +  A+  G++ + KPS+    +   + ++  EAG P GV+N
Sbjct: 138 GVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLN 197

Query: 92  FVPADGPVFGDTITASPYLAGINFTGSVP 120
            V  D     D +   P +  ++F GS P
Sbjct: 198 VVHGD-KEAVDRLLEHPDVKAVSFVGSTP 225

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score = 42.8 bits (101), Expect = 8e-06
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 8/92 (8%)

Query: 33  GFVAAVSPFNFTAIGGNLA---YTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 88
           G V A+S FN      NL      PA+  G  V+ KP+    LS      ++ EAG+P G
Sbjct: 126 GVVVAISAFNHPL---NLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAGLPEG 182

Query: 89  VVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
               VP +  V  + +   P +A  +F GS  
Sbjct: 183 WCQAVPCENAV-AEKLVTDPRVAFFSFIGSAR 213

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score = 40.9 bits (97), Expect = 4e-05
 Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 24/100 (24%)

Query: 33  GFVAAVSPFNFT-------AIGGNLAYTPALM-GSSVLWKPSD----TALLSNYTIYKIM 80
           G V  + P+NF        A        P LM G++VL K +      AL     I ++ 
Sbjct: 98  GVVLGIMPWNFPFWQVFRFAA-------PNLMAGNTVLLKHASNVPGCALA----IEELF 146

Query: 81  IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
            EAG P GV   +  D     + I A P + G+  TGS  
Sbjct: 147 REAGFPEGVFQNLLIDSDQV-EAIIADPRVRGVTLTGSER 185

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score = 40.5 bits (95), Expect = 6e-05
 Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 6/90 (6%)

Query: 33  GFVAAVSPFNFT-AIGGNLAYT-PALM-GSSVLWKPS-DTALLSNYTIYKIMIEAGVPPG 88
           G V A++P+NF   I  NLA   PAL  G++V+ KP+ DT   +      I      PPG
Sbjct: 143 GVVGAITPWNFPHQI--NLAKLGPALAAGNTVVLKPAPDTPWCAAVLGELIAEHTDFPPG 200

Query: 89  VVNFVPADGPVFGDTITASPYLAGINFTGS 118
           VVN V +     G  +   P +  ++FTGS
Sbjct: 201 VVNIVTSSDHRLGALLAKDPRVDMVSFTGS 230

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional

 Score = 39.1 bits (91), Expect = 2e-04
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 3/95 (3%)

Query: 26  LRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAG 84
           + YR L G + A+ P+NF          P L+ G+  L K +   +     I ++  +AG
Sbjct: 122 IEYRPL-GTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAG 180

Query: 85  VPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119
           +P GV  ++ AD       I     +A +  TGSV
Sbjct: 181 IPQGVYGWLNADNDGVSQMIN-DSRIAAVTVTGSV 214

Length = 462

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 10/99 (10%)

Query: 26  LRYRGLDGFVAAVSPFNF---TAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMI 81
           + YR   G V  +SP+N+   T +G  +   PAL  G++V+ KPS+   L    + +   
Sbjct: 115 VEYRPY-GVVGVISPWNYPLLTPMGDII---PALAAGNAVVLKPSEVTPLVGELLAEAWA 170

Query: 82  EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
            AG P GV+  V  DG      I A      + FTGSV 
Sbjct: 171 AAGPPQGVLQVVTGDGATGAALIDAGVDK--VAFTGSVA 207

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

 Score = 37.1 bits (86), Expect = 8e-04
 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 2/92 (2%)

Query: 28  YRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVP 86
           YR   G VA ++PFNF      L    AL MG+  L K      +      +++   G+P
Sbjct: 139 YRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMP 198

Query: 87  PGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
              V+ + +DGP     +  +       FTGS
Sbjct: 199 ATDVDLIHSDGPTMNKILLEANPRM-TLFTGS 229

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	120
KOG2450|consensus	501		100.0
COG1012	472	PutA NAD-dependent aldehyde dehydrogenases [Energy	99.97
KOG2451|consensus	503		99.97
PRK11241	482	gabD succinate-semialdehyde dehydrogenase I; Provi	99.96
PLN02766	501	coniferyl-aldehyde dehydrogenase	99.96
cd07126	489	ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de	99.96
PLN02466	538	aldehyde dehydrogenase family 2 member	99.96
cd07142	476	ALDH_F2BC Arabidosis aldehyde dehydrogenase family	99.96
PRK10090	409	aldehyde dehydrogenase A; Provisional	99.96
PLN02419	604	methylmalonate-semialdehyde dehydrogenase [acylati	99.96
PLN02278	498	succinic semialdehyde dehydrogenase	99.96
cd07124	512	ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl	99.96
cd07143	481	ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh	99.96
cd07109	454	ALDH_AAS00426 Uncharacterized Saccharopolyspora sp	99.96
PLN02467	503	betaine aldehyde dehydrogenase	99.96
cd07116	479	ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen	99.96
cd07144	484	ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd	99.96
cd07119	482	ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be	99.96
TIGR01804	467	BADH glycine betaine aldehyde dehydrogenase. Betai	99.96
TIGR01236	533	D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy	99.96
PRK13968	462	putative succinate semialdehyde dehydrogenase; Pro	99.96
cd07091	476	ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families	99.96
TIGR01780	448	SSADH succinate-semialdehyde dehydrogenase. SSADH	99.96
cd07123	522	ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate	99.96
cd07140	486	ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge	99.96
TIGR03250	472	PhnAcAld_DH putative phosphonoacetaldehyde dehydro	99.95
cd07113	477	ALDH_PADH_NahF Escherichia coli NAD+-dependent phe	99.95
cd07110	456	ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro	99.95
PRK13252	488	betaine aldehyde dehydrogenase; Provisional	99.95
cd07083	500	ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-	99.95
cd07120	455	ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh	99.95
cd07141	481	ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro	99.95
PRK03137	514	1-pyrroline-5-carboxylate dehydrogenase; Provision	99.95
PRK09847	494	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen	99.95
TIGR01237	511	D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy	99.95
PLN02315	508	aldehyde dehydrogenase family 7 member	99.95
cd07118	454	ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr	99.95
cd07097	473	ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent	99.95
cd07112	462	ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent	99.95
PRK09406	457	gabD1 succinic semialdehyde dehydrogenase; Reviewe	99.95
cd07115	453	ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy	99.95
PRK09457	487	astD succinylglutamic semialdehyde dehydrogenase;	99.95
TIGR03374	472	ABALDH 1-pyrroline dehydrogenase. Members of this	99.95
cd07150	451	ALDH_VaniDH_like Pseudomonas putida vanillin dehyd	99.95
cd07559	480	ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep	99.95
cd07145	456	ALDH_LactADH_F420-Bios Methanocaldococcus jannasch	99.95
cd07148	455	ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si	99.95
cd07095	431	ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde	99.95
cd07081	439	ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh	99.95
cd07089	459	ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric	99.95
cd07117	475	ALDH_StaphAldA1 Uncharacterized Staphylococcus aur	99.95
cd07151	465	ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd	99.95
cd07131	478	ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen	99.95
TIGR02299	488	HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd	99.95
cd07121	429	ALDH_EutE Ethanolamine utilization protein EutE-li	99.95
TIGR03240	484	arg_catab_astD succinylglutamic semialdehyde dehyd	99.95
cd07100	429	ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi	99.95
cd07138	466	ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac	99.95
TIGR03216	481	OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy	99.95
cd07088	468	ALDH_LactADH-AldA Escherichia coli lactaldehyde de	99.95
cd07146	451	ALDH_PhpJ Streptomyces putative phosphonoformaldeh	99.95
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	99.95
cd07105	432	ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l	99.95
cd07107	456	ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde	99.95
cd07086	478	ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip	99.95
cd07114	457	ALDH_DhaS Uncharacterized Candidatus pelagibacter	99.95
PLN02174	484	aldehyde dehydrogenase family 3 member H1	99.95
cd07090	457	ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty	99.95
PRK15398	465	aldehyde dehydrogenase EutE; Provisional	99.95
cd07152	443	ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen	99.95
PRK11809	1318	putA trifunctional transcriptional regulator/proli	99.95
cd07094	453	ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende	99.94
TIGR02288	551	PaaN_2 phenylacetic acid degradation protein paaN.	99.94
cd07104	431	ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen	99.94
cd07139	471	ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy	99.94
cd07130	474	ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se	99.94
cd07122	436	ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr	99.94
PRK13473	475	gamma-aminobutyraldehyde dehydrogenase; Provisiona	99.94
cd07093	455	ALDH_F8_HMSADH Human aldehyde dehydrogenase family	99.94
cd07085	478	ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog	99.94
cd07102	452	ALDH_EDX86601 Uncharacterized aldehyde dehydrogena	99.94
TIGR01722	477	MMSDH methylmalonic acid semialdehyde dehydrogenas	99.94
cd07103	451	ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald	99.94
PF00171	462	Aldedh: Aldehyde dehydrogenase family; InterPro: I	99.94
cd07125	518	ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d	99.94
cd07147	452	ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1	99.94
cd07092	450	ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g	99.94
cd07082	473	ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat	99.94
cd07108	457	ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a	99.94
cd07149	453	ALDH_y4uC Uncharacterized ALDH (y4uC) with similar	99.94
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	99.93
cd07101	454	ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi	99.93
PLN00412	496	NADP-dependent glyceraldehyde-3-phosphate dehydrog	99.93
cd07136	449	ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr	99.93
TIGR02518	488	EutH_ACDH acetaldehyde dehydrogenase (acetylating)	99.93
PRK09407	524	gabD2 succinic semialdehyde dehydrogenase; Reviewe	99.93
PLN02203	484	aldehyde dehydrogenase	99.93
cd07135	436	ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde	99.93
TIGR01238	500	D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy	99.93
cd07137	432	ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m	99.93
cd07099	453	ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di	99.93
TIGR00407	398	proA gamma-glutamyl phosphate reductase. The prosi	99.93
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	99.93
cd07084	442	ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent	99.93
cd07129	454	ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr	99.93
cd07098	465	ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and	99.93
cd07128	513	ALDH_MaoC-N N-terminal domain of the monoamine oxi	99.93
PTZ00381	493	aldehyde dehydrogenase family protein; Provisional	99.93
cd07133	434	ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l	99.93
cd07111	480	ALDH_F16 Aldehyde dehydrogenase family 16A1-like.	99.93
cd07106	446	ALDH_AldA-AAD23400 Streptomyces aureofaciens putat	99.93
cd07077	397	ALDH-like NAD(P)+-dependent aldehyde dehydrogenase	99.92
cd07127	549	ALDH_PAD-PaaZ Phenylacetic acid degradation protei	99.92
PRK11903	521	aldehyde dehydrogenase; Provisional	99.92
PLN02418	718	delta-1-pyrroline-5-carboxylate synthase	99.92
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	99.92
PRK13805	862	bifunctional acetaldehyde-CoA/alcohol dehydrogenas	99.92
cd07087	426	ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl	99.92
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	99.91
cd07079	406	ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu	99.91
cd07134	433	ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro	99.91
PRK00197	417	proA gamma-glutamyl phosphate reductase; Provision	99.91
cd07132	443	ALDH_F3AB Aldehyde dehydrogenase family 3 members	99.91
cd06534	367	ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s	99.91
cd07078	432	ALDH NAD(P)+ dependent aldehyde dehydrogenase fami	99.9
TIGR01092	715	P5CS delta l-pyrroline-5-carboxylate synthetase. T	99.89
KOG2456|consensus	477		99.89
KOG2455|consensus	561		99.81
KOG2454|consensus	583		99.79
cd07080	422	ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac	99.76
KOG2452|consensus	881		99.6
KOG2453|consensus	507		99.56
COG0014	417	ProA Gamma-glutamyl phosphate reductase [Amino aci	99.09
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	98.52
KOG4165|consensus	433		98.43
PF05893	399	LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086	98.38
PRK11809	1318	putA trifunctional transcriptional regulator/proli	95.07
COG0521	169	MoaB Molybdopterin biosynthesis enzymes [Coenzyme	80.03

>KOG2450|consensus

Probab=100.00  E-value=5.2e-33  Score=217.96  Aligned_cols=119  Identities=29%  Similarity=0.492  Sum_probs=112.6

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      +||||+++++..+...+.+.....|++++|+|||+.|.|||||+.+..|+++||| +||+||+||++++|++++.+++++
T Consensus       129 ~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~  208 (501)
T KOG2450|consen  129 FRYYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLC  208 (501)
T ss_pred             HHhhccchhhcccccCCCCCceEEEecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHh
Confidence            5899999999966555567888999999999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      +++|+|+|++|+|.|.+.++++.|.+|++|+.|.||||+.
T Consensus       209 ~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~  248 (501)
T KOG2450|consen  209 KEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTP  248 (501)
T ss_pred             HHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCc
Confidence            9999999999999999999999999999999999999974

>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

Probab=99.97  E-value=1.9e-31  Score=211.98  Aligned_cols=120  Identities=32%  Similarity=0.522  Sum_probs=108.6

Q ss_pred             ChHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           1 LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         1 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      +++||++.+++..+...+...+...+++++|+|||++|+|||||+++.++++++|| +||+||+|||+.+|+++..++++
T Consensus       103 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~~l~~~  182 (472)
T COG1012         103 FIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAEL  182 (472)
T ss_pred             HHHHHHHHHHHhcCCccCCCCCcceEEEeecceEEEEECCCCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHHHHHHH
Confidence            36899999987765432223378899999999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      +.++|+|+|++|++++++.+.++.|..||+|++|.||||++
T Consensus       183 ~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~  223 (472)
T COG1012         183 AAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTA  223 (472)
T ss_pred             HHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChH
Confidence            99999999999999997777999999999999999999973

>KOG2451|consensus

Probab=99.97  E-value=7.4e-31  Score=200.63  Aligned_cols=120  Identities=30%  Similarity=0.428  Sum_probs=111.0

Q ss_pred             ChHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHH
Q psy1844           1 LNAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYK   78 (120)
Q Consensus         1 ~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~   78 (120)
                      |.+|||+++++..+.. +...+.+..+++++|+||+++|+|||||..+..++..+|| +||+||+||++++|++++.+++
T Consensus       128 f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaLala~  207 (503)
T KOG2451|consen  128 FFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSALALAK  207 (503)
T ss_pred             HHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHHHHHH
Confidence            6899999999997644 5567888899999999999999999999999999999999 5999999999999999999999


Q ss_pred             HHHHhCCCCCcEEEEeCC---ChHHHHHHHhCCCcceEEEecCCC
Q psy1844          79 IMIEAGVPPGVVNFVPAD---GPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        79 ~l~~ag~p~g~~~~i~~~---~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      +.+++|+|+|++|+|+++   ..+.++.|+.+|.++.|.||||+.
T Consensus       208 lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~  252 (503)
T KOG2451|consen  208 LAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTN  252 (503)
T ss_pred             HHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccch
Confidence            999999999999999963   447899999999999999999974

>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional

Probab=99.96  E-value=1.4e-29  Score=201.74  Aligned_cols=119  Identities=27%  Similarity=0.435  Sum_probs=104.2

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||+..+++..+.. +...++...+++++|+|||++|+|||||+...++++++|| |||+||+|||+.+|+++..+.++
T Consensus       116 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~  195 (482)
T PRK11241        116 IEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAEL  195 (482)
T ss_pred             HHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHHHHHH
Confidence            578888877654321 2112345578899999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      ++++|+|+|++|++++++.+.++.|++|+++|.|+||||++
T Consensus       196 ~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~  236 (482)
T PRK11241        196 AIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTE  236 (482)
T ss_pred             HHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHH
Confidence            99999999999999997777899999999999999999963

>PLN02766 coniferyl-aldehyde dehydrogenase

Probab=99.96  E-value=2.2e-29  Score=201.37  Aligned_cols=118  Identities=27%  Similarity=0.393  Sum_probs=103.9

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+.+..+...........+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus       129 l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~  208 (501)
T PLN02766        129 LRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLA  208 (501)
T ss_pred             HHHHHHHHHHhcCceeccCCCceEEEEeccceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHH
Confidence            5788887776544221122345578899999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|++|++++++.+.++.|++|+++|+|.||||+
T Consensus       209 ~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~  247 (501)
T PLN02766        209 KLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGST  247 (501)
T ss_pred             HhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence            999999999999999777889999999999999999996

>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

Probab=99.96  E-value=3.4e-29  Score=199.75  Aligned_cols=117  Identities=26%  Similarity=0.310  Sum_probs=100.5

Q ss_pred             hHHHHHHhhhcCCCC---CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS---EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIY   77 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~   77 (120)
                      ++||++...+..+..   +....+.+.+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.
T Consensus       110 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~  189 (489)
T cd07126         110 LENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFL  189 (489)
T ss_pred             HHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHH
Confidence            678888776653311   1112345678999999999999999999999999999999 699999999999999999999


Q ss_pred             HHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          78 KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        78 ~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++.++|+|+|++|+++|++.+ +..++.|+++|+|.||||+
T Consensus       190 ~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~  230 (489)
T cd07126         190 RLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSS  230 (489)
T ss_pred             HHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCH
Confidence            9999999999999999996554 5568889999999999996

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.

>PLN02466 aldehyde dehydrogenase family 2 member

Probab=99.96  E-value=3.9e-29  Score=201.35  Aligned_cols=118  Identities=25%  Similarity=0.399  Sum_probs=104.2

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||+++.++..+...........+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus       166 l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll  245 (538)
T PLN02466        166 FRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLL  245 (538)
T ss_pred             HHHHHHHHHHhcCcccccCCCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHH
Confidence            5788888777654322122334568999999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|++|++++++.+.++.|.+|+++|.|.||||+
T Consensus       246 ~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~  284 (538)
T PLN02466        246 HEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGST  284 (538)
T ss_pred             HhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCH
Confidence            999999999999999777788999999999999999996

>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

Probab=99.96  E-value=4.1e-29  Score=198.58  Aligned_cols=118  Identities=27%  Similarity=0.409  Sum_probs=103.6

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||+++.++..+...........+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus       112 l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~  191 (476)
T cd07142         112 FRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLA  191 (476)
T ss_pred             HHHHHHHHHHhcCcccccCCCceEEEEEeceeeEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHH
Confidence            5778877766543222122335678899999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|+++++++++.+.++.|.+|+++|.|+||||+
T Consensus       192 ~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~  230 (476)
T cd07142         192 AEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGST  230 (476)
T ss_pred             HHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcH
Confidence            999999999999999777789999999999999999996

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.

>PRK10090 aldehyde dehydrogenase A; Provisional

Probab=99.96  E-value=7.1e-29  Score=194.30  Aligned_cols=119  Identities=27%  Similarity=0.423  Sum_probs=104.6

Q ss_pred             ChHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHH
Q psy1844           1 LNAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYK   78 (120)
Q Consensus         1 ~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~   78 (120)
                      +++||++++++..+.. ....++...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|.++..+.+
T Consensus        40 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~  119 (409)
T PRK10090         40 YIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAK  119 (409)
T ss_pred             HHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHH
Confidence            3678888877664322 1112344678899999999999999999999999999999 6999999999999999999999


Q ss_pred             HHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          79 IMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        79 ~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++++|+|+|+++++++++.+.++.|.+|+++|+|.||||+
T Consensus       120 ~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~  160 (409)
T PRK10090        120 IVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSV  160 (409)
T ss_pred             HHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECCH
Confidence            99999999999999999777789999999999999999996

>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]

Probab=99.96  E-value=5.3e-29  Score=202.31  Aligned_cols=118  Identities=22%  Similarity=0.301  Sum_probs=102.6

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++.+++..+.. .....+...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..++++
T Consensus       219 ~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l  298 (604)
T PLN02419        219 VEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAEL  298 (604)
T ss_pred             HHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHH
Confidence            578888887664321 1112344568899999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      +.++|+|+|++|+++|+ .+.++.|+.|++||+|.||||++
T Consensus       299 ~~eAGlP~GvvnvV~G~-~~~~~~L~~~~~Vd~V~FTGSt~  338 (604)
T PLN02419        299 AMEAGLPDGVLNIVHGT-NDTVNAICDDEDIRAVSFVGSNT  338 (604)
T ss_pred             HHHhCcCcceEEEEeCC-hHHHHHHHhCCCCCEEEEeCChH
Confidence            99999999999999996 46789999999999999999963

>PLN02278 succinic semialdehyde dehydrogenase

Probab=99.96  E-value=1.5e-28  Score=196.48  Aligned_cols=118  Identities=34%  Similarity=0.517  Sum_probs=104.3

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++.+++..+.. +...++...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|.++..+.++
T Consensus       130 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~  209 (498)
T PLN02278        130 LEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAEL  209 (498)
T ss_pred             HHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHH
Confidence            578888887764322 2223345678889999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|+++++++++.+.++.|+.|+++|+|.||||+
T Consensus       210 l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~  249 (498)
T PLN02278        210 ALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGST  249 (498)
T ss_pred             HHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcH
Confidence            9999999999999999777788999999999999999996

>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

Probab=99.96  E-value=1.7e-28  Score=196.65  Aligned_cols=119  Identities=30%  Similarity=0.443  Sum_probs=105.6

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+++..+.......+...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~  216 (512)
T cd07124         137 LEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEIL  216 (512)
T ss_pred             HHHHHHHHHHhcCccccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHH
Confidence            5788888887744222223345678999999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      +++|+|+|+++++++++.+.++.|.+|+++|.|.||||++
T Consensus       217 ~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~  256 (512)
T cd07124         217 EEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSRE  256 (512)
T ss_pred             HHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchH
Confidence            9999999999999997778899999999999999999963

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.

>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

Probab=99.96  E-value=1.6e-28  Score=195.60  Aligned_cols=118  Identities=26%  Similarity=0.413  Sum_probs=103.4

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      +++|++++++..+...........+.+++|+|||++|+|||||+...++++++|| +||+||+|||+++|.++..+.+++
T Consensus       115 ~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l  194 (481)
T cd07143         115 FRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLI  194 (481)
T ss_pred             HHHHHHHHHHhcCccccCCCCceEEEEEecceeEEEECCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHH
Confidence            5778887776533221122344577899999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|+++++++++.+.++.|..|+++|+|.||||+
T Consensus       195 ~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~  233 (481)
T cd07143         195 PEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGST  233 (481)
T ss_pred             HhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECch
Confidence            999999999999999777789999999999999999996

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.

>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

Probab=99.96  E-value=2.5e-28  Score=192.88  Aligned_cols=118  Identities=26%  Similarity=0.394  Sum_probs=103.9

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++..++..+......++...+.+++|+||+++|+|||||+..+++.+++|| +||+||+|||+.+|+++..+.+++
T Consensus        88 l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~  167 (454)
T cd07109          88 FEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELA  167 (454)
T ss_pred             HHHHHHHHHHhcCcccccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH
Confidence            4677777766644222122445678999999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|+++++++++.+.++.|++|+++|.|+||||+
T Consensus       168 ~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~  206 (454)
T cd07109         168 EEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSV  206 (454)
T ss_pred             HHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCH
Confidence            999999999999999777889999999999999999996

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.

>PLN02467 betaine aldehyde dehydrogenase

Probab=99.96  E-value=2e-28  Score=195.91  Aligned_cols=118  Identities=27%  Similarity=0.463  Sum_probs=103.7

Q ss_pred             hHHHHHHhhhcCCCC---CC-CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS---ED-PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI   76 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~---~~-~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~   76 (120)
                      ++||++.+++..+..   .. +......+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+
T Consensus       118 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l  197 (503)
T PLN02467        118 FEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLEL  197 (503)
T ss_pred             HHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHH
Confidence            578888887764321   11 11234578899999999999999999999999999999 69999999999999999999


Q ss_pred             HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++++++|+|+|++|++++++.+.++.|+.|+++|.|.||||+
T Consensus       198 ~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~  240 (503)
T PLN02467        198 ADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGST  240 (503)
T ss_pred             HHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCH
Confidence            9999999999999999999777889999999999999999996

>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

Probab=99.96  E-value=2.1e-28  Score=194.63  Aligned_cols=117  Identities=25%  Similarity=0.413  Sum_probs=103.1

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+++..+.......+...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus       107 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~  186 (479)
T cd07116         107 FRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELI  186 (479)
T ss_pred             HHHHHHhHHHcCCeeecCCCCceEEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH
Confidence            5688887776543222223445678899999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++ +|+|++|++++++.+.++.|+.|+++|.|.||||+
T Consensus       187 ~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~  224 (479)
T cd07116         187 GDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGET  224 (479)
T ss_pred             HHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCH
Confidence            998 99999999999777889999999999999999996

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.

>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

Probab=99.96  E-value=2.6e-28  Score=194.25  Aligned_cols=118  Identities=29%  Similarity=0.451  Sum_probs=103.8

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++++++..+.......+...+.+++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.+++
T Consensus       115 l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~  194 (484)
T cd07144         115 IRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLV  194 (484)
T ss_pred             HHHHHHHHHHhcCceecCCCCceEEEEEecceEEEEECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHH
Confidence            5678887777643221122344568899999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|++|++++++.+.++.|..|+++|+|.||||+
T Consensus       195 ~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~  233 (484)
T cd07144         195 KEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGST  233 (484)
T ss_pred             HHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcH
Confidence            999999999999999777889999999999999999996

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.

>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

Probab=99.96  E-value=2.7e-28  Score=194.02  Aligned_cols=118  Identities=29%  Similarity=0.490  Sum_probs=103.9

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++|+++.+++..+.......+...+.+++|+|||++|+|||||+...++.+++|| +||+||+|||+.+|.++..+.+++
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~  184 (482)
T cd07119         105 FRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELI  184 (482)
T ss_pred             HHHHHHHHHHhcCccccCCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCccccHHHHHHHHHH
Confidence            5678887776543222223455678999999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .++|+|+|+++++++++.+.++.|++|+++|+|+||||+
T Consensus       185 ~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~  223 (482)
T cd07119         185 EEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGT  223 (482)
T ss_pred             HHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcH
Confidence            999999999999999777789999999999999999996

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.

>TIGR01804 BADH glycine betaine aldehyde dehydrogenase

Probab=99.96  E-value=2.4e-28  Score=193.65  Aligned_cols=118  Identities=27%  Similarity=0.384  Sum_probs=103.7

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++|+++.+++..+...........+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|.++..+.+++
T Consensus       104 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~  183 (467)
T TIGR01804       104 FEFFAGLADKDGGEIIPLPIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSEITPLTALKVAELM  183 (467)
T ss_pred             HHHHHHHHHHhCCccccCCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHH
Confidence            5788888777644321112225578899999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|+++++++++.+.++.|..|+++|.|.||||+
T Consensus       184 ~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~  222 (467)
T TIGR01804       184 EEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGV  222 (467)
T ss_pred             HHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcH
Confidence            999999999999998767889999999999999999996

Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).

>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

Probab=99.96  E-value=2.3e-28  Score=196.70  Aligned_cols=118  Identities=49%  Similarity=0.720  Sum_probs=103.8

Q ss_pred             hHHHHHHhhhcCCCCC-CCCCCcceEEEeccC-eEEEEEcCCChhhhhHHhhhccccCCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISE-DPKSTLNSLRYRGLD-GFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~p~-Gvv~~i~p~n~P~~~~~~~~~~alaGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++.+++..+... ....+...+++++|+ |||++|+|||||+....+++++||+||+||+|||+++|+++..+.++
T Consensus       139 ~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaGN~VVlKPs~~tp~~~~~l~~~  218 (533)
T TIGR01236       139 FRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIAGNLPGAPALMGNTVIWKPSITATLSNYLTMRI  218 (533)
T ss_pred             HHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHHHHHHHHHHHhCCeEEEECCCcCCHHHHHHHHH
Confidence            5788887776643211 123345678889999 99999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|++++++.+.++.|+.|+++++|.||||+
T Consensus       219 ~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~  258 (533)
T TIGR01236       219 LEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGST  258 (533)
T ss_pred             HHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCH
Confidence            9999999999999999777889999999999999999996

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.

>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional

Probab=99.96  E-value=2.5e-28  Score=193.63  Aligned_cols=117  Identities=21%  Similarity=0.258  Sum_probs=99.8

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+++..............+++++|+|||++|+|||||++.+++++++|| +||+||+|||+.+|+++..+.+++
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp~~~~~l~~~~  176 (462)
T PRK13968         97 CDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVF  176 (462)
T ss_pred             HHHHHHHHHHhhCCccccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHH
Confidence            5788887776532111112345678889999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|++|++++++. ....++.|+++|.|.||||+
T Consensus       177 ~~aGlP~gv~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~  214 (462)
T PRK13968        177 KDAGIPQGVYGWLNADND-GVSQMINDSRIAAVTVTGSV  214 (462)
T ss_pred             HHcCcCcCcEEEEecCch-hhHHHhcCCCCCEEEEECCH
Confidence            999999999999998654 34568899999999999995

>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

Probab=99.96  E-value=2.7e-28  Score=193.75  Aligned_cols=118  Identities=31%  Similarity=0.465  Sum_probs=103.3

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++|++++.++..+.......+...+.+++|+|||++|+|||||+..+++.+++|| +||+||+|||+.+|.++..+.+++
T Consensus       112 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~  191 (476)
T cd07091         112 LRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELI  191 (476)
T ss_pred             HHHHHHHHHHhcCccccCCCCceEEEEEeceeEEEEECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHH
Confidence            5677777666543221122445568899999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .++|+|+|+++++++++.+.++.|..|+++|.|.||||+
T Consensus       192 ~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~  230 (476)
T cd07091         192 KEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGST  230 (476)
T ss_pred             HHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcH
Confidence            999999999999999777788999999999999999996

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co

>TIGR01780 SSADH succinate-semialdehyde dehydrogenase

Probab=99.96  E-value=2.7e-28  Score=192.62  Aligned_cols=118  Identities=30%  Similarity=0.459  Sum_probs=103.1

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++|++...++..+.. +....+...+.+++|+|||++|+|||||+...++.+++|| +||+||+|||+++|+++..+.++
T Consensus        87 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~  166 (448)
T TIGR01780        87 LEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARL  166 (448)
T ss_pred             HHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHHHHHHHH
Confidence            567777766654422 2223455677889999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCC-ChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPAD-GPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~-~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|+++++ +.+.++.|++|+++|.|.||||+
T Consensus       167 ~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~  207 (448)
T TIGR01780       167 AEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGST  207 (448)
T ss_pred             HHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcH
Confidence            99999999999999996 57788999999999999999996

SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).

>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

Probab=99.96  E-value=2.5e-28  Score=196.07  Aligned_cols=118  Identities=58%  Similarity=0.873  Sum_probs=103.4

Q ss_pred             hHHHHHHhhhcCCC-CCCCCCCcceEEEeccC-eEEEEEcCCChhhhhHHhhhccccCCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPI-SEDPKSTLNSLRYRGLD-GFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~p~-Gvv~~i~p~n~P~~~~~~~~~~alaGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++.+++.... ......+...+++++|+ ||+++|+|||||+....+++++||+||+||+|||+++|+++..+.++
T Consensus       139 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~~~~palaGN~VVlKPs~~tp~~~~~l~~~  218 (522)
T cd07123         139 LRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPALMGNVVLWKPSDTAVLSNYLVYKI  218 (522)
T ss_pred             HHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHHHHHHHHHHhCCEEEEECCCCCCHHHHHHHHH
Confidence            57788877765331 11112245678899998 99999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|++++++.+.++.|+.|++++.|.||||+
T Consensus       219 l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~  258 (522)
T cd07123         219 LEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGST  258 (522)
T ss_pred             HHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCH
Confidence            9999999999999999777789999999999999999996

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.

>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

Probab=99.96  E-value=2.6e-28  Score=194.65  Aligned_cols=118  Identities=25%  Similarity=0.424  Sum_probs=102.9

Q ss_pred             hHHHHHHhhhcCCCCCC-C---CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISED-P---KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI   76 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~-~---~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~   76 (120)
                      ++||++++++..+.... .   ......+++++|+||+++|+|||||+...++++++|| +||+||+|||+.+|.++..+
T Consensus       114 l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l  193 (486)
T cd07140         114 FRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKF  193 (486)
T ss_pred             HHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHHHHHH
Confidence            57888877766432211 1   1223467899999999999999999999999999999 69999999999999999999


Q ss_pred             HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .++++++|+|+|++|++++++.+.++.|..|++|++|.||||+
T Consensus       194 ~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~  236 (486)
T cd07140         194 AELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGST  236 (486)
T ss_pred             HHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence            9999999999999999999777889999999999999999996

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.

>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase

Probab=99.95  E-value=3.3e-28  Score=193.35  Aligned_cols=118  Identities=25%  Similarity=0.363  Sum_probs=103.6

Q ss_pred             hHHHHHHhhhcCCCCC-----CCCCCcceEEEeccC-eEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHH
Q psy1844           2 NAFFAKELTKYQPISE-----DPKSTLNSLRYRGLD-GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNY   74 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~-----~~~~~~~~~~~~~p~-Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~   74 (120)
                      ++||++.+++..+...     ........+++++|+ |||++|+|||||+..+++++++|| +||+||+|||+++|+++.
T Consensus       104 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~  183 (472)
T TIGR03250       104 LTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSAL  183 (472)
T ss_pred             HHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHHHH
Confidence            5788888876643111     112244678999998 999999999999999999999999 699999999999999999


Q ss_pred             HHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          75 TIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        75 ~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .+.++++++|+|+|++|++++++.+.++.|+.|+++|.|.||||+
T Consensus       184 ~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~  228 (472)
T TIGR03250       184 YLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGV  228 (472)
T ss_pred             HHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence            999999999999999999999777789999999999999999996

It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.

>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

Probab=99.95  E-value=3.1e-28  Score=193.60  Aligned_cols=117  Identities=31%  Similarity=0.489  Sum_probs=100.8

Q ss_pred             hHHHHHHhhhcCCCC--CC-C---CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHH
Q psy1844           2 NAFFAKELTKYQPIS--ED-P---KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNY   74 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~--~~-~---~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~   74 (120)
                      ++||+++..+..+..  .. +   ......+++++|+||+++|+|||||+...++++++|| +||+||+|||+.+|+++.
T Consensus       107 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~~~~  186 (477)
T cd07113         107 LRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLL  186 (477)
T ss_pred             HHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence            567777766543311  10 1   1224567899999999999999999999999999999 699999999999999999


Q ss_pred             HHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          75 TIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        75 ~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .+.++++++|+|+|++|++++++. .++.|++|+++|+|.||||+
T Consensus       187 ~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~  230 (477)
T cd07113         187 RVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSV  230 (477)
T ss_pred             HHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcH
Confidence            999999999999999999999765 88999999999999999996

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.

>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

Probab=99.95  E-value=3.6e-28  Score=192.13  Aligned_cols=118  Identities=31%  Similarity=0.512  Sum_probs=103.2

Q ss_pred             hHHHHHHhhhcCC---CC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844           2 NAFFAKELTKYQP---IS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI   76 (120)
Q Consensus         2 ~~~~a~~~~~~~~---~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~   76 (120)
                      ++||++.+++...   .. +.+.++...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l  166 (456)
T cd07110          87 FEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELEL  166 (456)
T ss_pred             HHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHHHHHH
Confidence            4677777776532   11 1122355678899999999999999999999999999999 69999999999999999999


Q ss_pred             HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .++++++|+|+|+++++++++.+.++.|++|+++|+|+||||+
T Consensus       167 ~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~  209 (456)
T cd07110         167 AEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGST  209 (456)
T ss_pred             HHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCH
Confidence            9999999999999999999777789999999999999999995

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.

>PRK13252 betaine aldehyde dehydrogenase; Provisional

Probab=99.95  E-value=3e-28  Score=194.10  Aligned_cols=117  Identities=27%  Similarity=0.420  Sum_probs=102.1

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++..++..+.......+...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus       113 l~~~~~~~~~~~g~~~~~~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~  192 (488)
T PRK13252        113 LEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIY  192 (488)
T ss_pred             HHHHHHHHHHhcCceeccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHH
Confidence            5778877776543221112345678899999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|++|++++++. .++.|..|+++|.|+||||+
T Consensus       193 ~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~  230 (488)
T PRK13252        193 TEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGV  230 (488)
T ss_pred             HHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcH
Confidence            999999999999998665 88999999999999999986

>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

Probab=99.95  E-value=3.7e-28  Score=194.22  Aligned_cols=118  Identities=29%  Similarity=0.485  Sum_probs=103.9

Q ss_pred             hHHHHHHhhhcCCCC--CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS--EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYK   78 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~   78 (120)
                      ++||++++.+..+..  .....+...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~  202 (500)
T cd07083         123 IRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFE  202 (500)
T ss_pred             HHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHH
Confidence            578888887664321  1122445677889999999999999999999999999999 6999999999999999999999


Q ss_pred             HHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          79 IMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        79 ~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++++|+|+|+++++++++.+.++.|.+|+++|.|.||||+
T Consensus       203 ~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~  243 (500)
T cd07083         203 IFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSL  243 (500)
T ss_pred             HHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcH
Confidence            99999999999999999777889999999999999999996

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.

>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

Probab=99.95  E-value=4.3e-28  Score=191.99  Aligned_cols=118  Identities=28%  Similarity=0.361  Sum_probs=104.2

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+++..+......++...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus        88 l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~~~~~l~~~~  167 (455)
T cd07120          88 LRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRIL  167 (455)
T ss_pred             HHHHHHHHHHhcCcccccCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChHHHHHHHHHH
Confidence            5788888877644222122345678899999999999999999999999999999 699999999999999999999999


Q ss_pred             HH-hCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IE-AGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~-ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++ +|+|+|+++++++++.+.++.|++|++++.|.||||+
T Consensus       168 ~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~  207 (455)
T cd07120         168 AEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGST  207 (455)
T ss_pred             HHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCH
Confidence            99 6999999999999777789999999999999999996

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.

>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Probab=99.95  E-value=4.1e-28  Score=193.09  Aligned_cols=118  Identities=29%  Similarity=0.490  Sum_probs=103.4

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++..++..+...........+.+++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.+++
T Consensus       116 l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l  195 (481)
T cd07141         116 LRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLI  195 (481)
T ss_pred             HHHHHHHHHHhcCceecCCCCceEEEEEeceeEEEEEccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHH
Confidence            4677777776644221112334578899999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|+++++++++.+.++.|..|+++|.|.||||+
T Consensus       196 ~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~  234 (481)
T cd07141         196 KEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGST  234 (481)
T ss_pred             HHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence            999999999999999777788999999999999999996

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.

>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional

Probab=99.95  E-value=4.8e-28  Score=194.14  Aligned_cols=119  Identities=28%  Similarity=0.406  Sum_probs=103.8

Q ss_pred             hHHHHHHhhhcC-CCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQ-PISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++.+++.. +.......+...+.+++|+||+++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.++
T Consensus       141 ~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~  220 (514)
T PRK03137        141 LEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEV  220 (514)
T ss_pred             HHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHH
Confidence            578888877653 2111122344568899999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      ++++|+|+|++|++++++.+.++.|++|++++.|.||||++
T Consensus       221 l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~  261 (514)
T PRK03137        221 LEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSRE  261 (514)
T ss_pred             HHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcH
Confidence            99999999999999997778899999999999999999973

>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=99.95  E-value=5.2e-28  Score=193.18  Aligned_cols=118  Identities=31%  Similarity=0.429  Sum_probs=104.0

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+++..+.......+...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|.++..+.+++
T Consensus       128 l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~  207 (494)
T PRK09847        128 IRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLA  207 (494)
T ss_pred             HHHHHHHHHHhcCccccCCCCceeEEEecceeEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHH
Confidence            5788888877644221112334568899999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|++|++++++.+.++.|..|+++|.|.||||+
T Consensus       208 ~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~  246 (494)
T PRK09847        208 KEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGST  246 (494)
T ss_pred             HHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCH
Confidence            999999999999999777889999999999999999995

>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

Probab=99.95  E-value=4e-28  Score=194.44  Aligned_cols=118  Identities=28%  Similarity=0.460  Sum_probs=103.8

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++.+++..+.. .....+...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.++
T Consensus       137 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~  216 (511)
T TIGR01237       137 CEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEI  216 (511)
T ss_pred             HHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHH
Confidence            578888887764321 1112344567889999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|++++++.+.++.|..|++++.|.||||+
T Consensus       217 ~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~  256 (511)
T TIGR01237       217 LIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSR  256 (511)
T ss_pred             HHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECch
Confidence            9999999999999999777889999999999999999996

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.

>PLN02315 aldehyde dehydrogenase family 7 member

Probab=99.95  E-value=4.8e-28  Score=193.98  Aligned_cols=117  Identities=19%  Similarity=0.276  Sum_probs=100.3

Q ss_pred             hHHHHHHhhhcCCC-CCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH----
Q psy1844           2 NAFFAKELTKYQPI-SEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT----   75 (120)
Q Consensus         2 ~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~----   75 (120)
                      ++||++.+++..+- .+...+....+.+++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..    
T Consensus       124 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l  203 (508)
T PLN02315        124 CDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKL  203 (508)
T ss_pred             HHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHH
Confidence            57888877765432 12122334557789999999999999999999999999999 6999999999999999887    


Q ss_pred             HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.++++++|+|+|++|++++ +.+.++.|..|+++|+|.||||+
T Consensus       204 ~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~  246 (508)
T PLN02315        204 VAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSS  246 (508)
T ss_pred             HHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCH
Confidence            67888999999999999998 67789999999999999999996

>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like

Probab=99.95  E-value=5e-28  Score=191.43  Aligned_cols=118  Identities=29%  Similarity=0.403  Sum_probs=102.2

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++|+++..++..+.. .....+...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|.++..+.++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~~~~l~~~  168 (454)
T cd07118          89 WRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAEL  168 (454)
T ss_pred             HHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHH
Confidence            567777665554322 1112334567899999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|+++++++++.+.++.|.+|+++|.|.||||+
T Consensus       169 ~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~  208 (454)
T cd07118         169 LIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGST  208 (454)
T ss_pred             HHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcH
Confidence            9999999999999999777789999999999999999996

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.

>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

Probab=99.95  E-value=4.9e-28  Score=192.24  Aligned_cols=118  Identities=27%  Similarity=0.490  Sum_probs=103.9

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++..++..+.. ....++...+..++|+||+++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.++
T Consensus       105 l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~  184 (473)
T cd07097         105 FRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEI  184 (473)
T ss_pred             HHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHH
Confidence            578887777664321 1122345678999999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.++|+|+|++|++++++.+.++.|.+|+++|.|.||||+
T Consensus       185 ~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~  224 (473)
T cd07097         185 LEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGST  224 (473)
T ss_pred             HHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcH
Confidence            9999999999999999777789999999999999999996

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.

>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

Probab=99.95  E-value=4.3e-28  Score=192.13  Aligned_cols=118  Identities=30%  Similarity=0.460  Sum_probs=103.7

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+++..+...........+.+++|+|||++|+|||||+...++++++|| +||+||+|||+++|+++..+.+++
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~  174 (462)
T cd07112          95 FRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELA  174 (462)
T ss_pred             HHHHHHHHHHhcCceecCCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHHHHHHHHHH
Confidence            5678887776643221122345677899999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .++|+|+|+++++++++.+.++.|..|+++|.|.||||+
T Consensus       175 ~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~  213 (462)
T cd07112         175 LEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGST  213 (462)
T ss_pred             HhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCH
Confidence            999999999999999777889999999999999999996

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.

>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed

Probab=99.95  E-value=5.4e-28  Score=191.50  Aligned_cols=117  Identities=21%  Similarity=0.226  Sum_probs=100.4

Q ss_pred             hHHHHHHhhhcCCCC-C--CCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-E--DPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIY   77 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~--~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~   77 (120)
                      ++||++.+++..... .  ...+....+++++|+|||++|+|||||++..++++++|| +||+||+|||+.+|+++..+.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~  170 (457)
T PRK09406         91 FRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLA  170 (457)
T ss_pred             HHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHH
Confidence            578888877653211 1  111334678899999999999999999999999999999 699999999999999999999


Q ss_pred             HHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          78 KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        78 ~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++.++|+|+|+++++++ +.+.+..|+.|+++++|.||||+
T Consensus       171 ~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~  211 (457)
T PRK09406        171 DLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSE  211 (457)
T ss_pred             HHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcH
Confidence            999999999999999986 34567889999999999999996

>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

Probab=99.95  E-value=5.8e-28  Score=190.81  Aligned_cols=118  Identities=31%  Similarity=0.459  Sum_probs=103.4

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++++++..+.......+...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+++|+++..+.+++
T Consensus        88 l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~  167 (453)
T cd07115          88 FRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELM  167 (453)
T ss_pred             HHHHHHHHHHhcCceecCCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHH
Confidence            4677777766543221123445678999999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|+++++++++.+.++.|..|+++|+|+||||+
T Consensus       168 ~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~  206 (453)
T cd07115         168 AEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGST  206 (453)
T ss_pred             HhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcH
Confidence            999999999999999777788999999999999999996

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.

>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed

Probab=99.95  E-value=8.2e-28  Score=191.71  Aligned_cols=116  Identities=28%  Similarity=0.412  Sum_probs=98.6

Q ss_pred             HHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH
Q psy1844           3 AFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI   81 (120)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~   81 (120)
                      +|+++...+..+......++...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.++++
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~  185 (487)
T PRK09457        106 AISIQAYHERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQ  185 (487)
T ss_pred             HHHHHHHHHhcCceeccCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHH
Confidence            455555544322111112344568889999999999999999999999999999 6999999999999999999999999


Q ss_pred             HhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          82 EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        82 ~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++|+|+|+++++++ +.+.++.|++|+++|.|.||||+
T Consensus       186 ~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~  222 (487)
T PRK09457        186 QAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSA  222 (487)
T ss_pred             HhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCH
Confidence            99999999999998 56789999999999999999996

>TIGR03374 ABALDH 1-pyrroline dehydrogenase

Probab=99.95  E-value=6.9e-28  Score=191.58  Aligned_cols=117  Identities=26%  Similarity=0.428  Sum_probs=101.2

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++..++..+.. .....+...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|.++..+.++
T Consensus       107 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l  186 (472)
T TIGR03374       107 FRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAEL  186 (472)
T ss_pred             HHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHH
Confidence            567777766554321 1112344578899999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++. +|+|++|++++++.+.++.|+.|+++|+|.||||+
T Consensus       187 ~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~  225 (472)
T TIGR03374       187 AKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSI  225 (472)
T ss_pred             HHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCH
Confidence            9985 99999999999777889999999999999999996

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.

>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like

Probab=99.95  E-value=7.9e-28  Score=189.77  Aligned_cols=118  Identities=31%  Similarity=0.430  Sum_probs=103.2

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++++++.+++..+.. +....+...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+.+|.++..+.++
T Consensus        89 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~~l~~~  168 (451)
T cd07150          89 LRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEI  168 (451)
T ss_pred             HHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHHHHHHH
Confidence            567777776654322 2122445678899999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|+++++++++.+.++.|.+|+++|.|.||||+
T Consensus       169 ~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~  208 (451)
T cd07150         169 MEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGST  208 (451)
T ss_pred             HHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcH
Confidence            9999999999999999777889999999999999999996

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.

>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

Probab=99.95  E-value=6.8e-28  Score=191.89  Aligned_cols=117  Identities=26%  Similarity=0.434  Sum_probs=102.8

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+++..+.....+.+...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus       107 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~  186 (480)
T cd07559         107 FRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELI  186 (480)
T ss_pred             HHHHHHHHHHhcCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHH
Confidence            5678887776543221123455678899999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++ +|+|++|++++++.+.++.|++|+++|.|.||||+
T Consensus       187 ~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~  224 (480)
T cd07559         187 GDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGST  224 (480)
T ss_pred             HHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence            996 99999999999777889999999999999999996

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.

>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

Probab=99.95  E-value=7.9e-28  Score=190.17  Aligned_cols=118  Identities=35%  Similarity=0.473  Sum_probs=102.1

Q ss_pred             hHHHHHHhhhcCCCCCCCC-----CCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPK-----STLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT   75 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~   75 (120)
                      ++||++.+++..+.....+     .....+.+++|+||+++|+|||||+...++.+++|| +||+||+|||+.+|.++..
T Consensus        89 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~  168 (456)
T cd07145          89 FKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIE  168 (456)
T ss_pred             HHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence            5677777665543211111     234567889999999999999999999999999999 6999999999999999999


Q ss_pred             HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.++++++|+|+|+++++++++.+.++.|++|++++.|.||||+
T Consensus       169 l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~  212 (456)
T cd07145         169 LAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGST  212 (456)
T ss_pred             HHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCH
Confidence            99999999999999999999777889999999999999999996

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.

>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=99.95  E-value=9.4e-28  Score=189.92  Aligned_cols=117  Identities=26%  Similarity=0.325  Sum_probs=101.4

Q ss_pred             hHHHHHHhhhcCCCC-C-C---CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-E-D---PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT   75 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~-~---~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~   75 (120)
                      ++||++.+.+..+.. . .   ..++...+.+++|+||+++|+|||||+...++.+++|| +||+||+|||+.+|+++..
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~  169 (455)
T cd07148          90 VELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLA  169 (455)
T ss_pred             HHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccHHHHH
Confidence            467777777653311 1 1   12345678999999999999999999999999999999 6999999999999999999


Q ss_pred             HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.++++++|+|+|++++++++ .+.++.|+.|+++|.|.||||+
T Consensus       170 l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~  212 (455)
T cd07148         170 FVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSA  212 (455)
T ss_pred             HHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCH
Confidence            999999999999999999985 4678999999999999999996

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

Probab=99.95  E-value=1.1e-27  Score=188.64  Aligned_cols=117  Identities=28%  Similarity=0.406  Sum_probs=101.2

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++|+++...+..+....+.++...+.+++|+|||++|+|||||++.+++++++|| +||+||+|||+.+|+++..+.+++
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~  147 (431)
T cd07095          68 IDISIKAYHERTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELW  147 (431)
T ss_pred             HHHHHHHHHHhcCCcccCCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHH
Confidence            4566666655533221123455678899999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .++|+|+|++++++++ .+.++.|.+|+++|.|.||||+
T Consensus       148 ~~ag~P~g~~~~v~g~-~~~~~~l~~~~~v~~v~ftGs~  185 (431)
T cd07095         148 EEAGLPPGVLNLVQGG-RETGEALAAHEGIDGLLFTGSA  185 (431)
T ss_pred             HHhCcChhHheEEeCc-HHHHHHHhcCCCCCEEEEECcH
Confidence            9999999999999984 5688999999999999999996

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.

>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

Probab=99.95  E-value=1.2e-27  Score=188.81  Aligned_cols=98  Identities=15%  Similarity=0.192  Sum_probs=91.1

Q ss_pred             CcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH----HhCCCCCcEEEEeCC
Q psy1844          22 TLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI----EAGVPPGVVNFVPAD   96 (120)
Q Consensus        22 ~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~----~ag~p~g~~~~i~~~   96 (120)
                      ....+++++|+|||++|+|||||+..+++++++|| +||+||+|||+++|+++..+.++++    ++|+|+|++|++++.
T Consensus        86 ~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~gvv~~v~g~  165 (439)
T cd07081          86 NGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNP  165 (439)
T ss_pred             CCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCChhhEEEEcCC
Confidence            34578999999999999999999999999999999 6999999999999999988888875    679999999999987


Q ss_pred             ChHHHHHHHhCCCcceEEEecCC
Q psy1844          97 GPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        97 ~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.+.++.|++|++|++|.||||+
T Consensus       166 ~~~~g~~L~~~~~V~~V~FTGs~  188 (439)
T cd07081         166 SIELAQRLMKFPGIGLLLATGGP  188 (439)
T ss_pred             CHHHHHHHHcCCCCCEEEEECCH
Confidence            77789999999999999999996

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.

>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

Probab=99.95  E-value=1.4e-27  Score=189.10  Aligned_cols=118  Identities=30%  Similarity=0.437  Sum_probs=103.6

Q ss_pred             hHHHHHHhhhcCCCC--CCC---CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS--EDP---KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT   75 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~--~~~---~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~   75 (120)
                      ++||++.+++.....  ...   ..+...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|.++..
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~  168 (459)
T cd07089          89 LRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALL  168 (459)
T ss_pred             HHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHH
Confidence            578888877653211  111   1345678999999999999999999999999999999 6999999999999999999


Q ss_pred             HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.++++++|+|+|+++++++++.+.++.|.+|++++.|.||||+
T Consensus       169 l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~  212 (459)
T cd07089         169 LGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGST  212 (459)
T ss_pred             HHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcH
Confidence            99999999999999999999777789999999999999999996

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.

>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

Probab=99.95  E-value=1.3e-27  Score=190.07  Aligned_cols=117  Identities=31%  Similarity=0.439  Sum_probs=101.9

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+++..+.......+...+.+++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|.++..+.+++
T Consensus       107 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~  186 (475)
T cd07117         107 FRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKII  186 (475)
T ss_pred             HHHHHHHHHHhcCcccccCCCceeEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHH
Confidence            5678877776544221112344578899999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++ +|+|++|++++++.+.++.|..|+++|.|.||||+
T Consensus       187 ~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~  224 (475)
T cd07117         187 QDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGST  224 (475)
T ss_pred             HHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcH
Confidence            986 99999999999777889999999999999999996

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.

>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

Probab=99.95  E-value=1.5e-27  Score=189.04  Aligned_cols=118  Identities=30%  Similarity=0.404  Sum_probs=101.7

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHH-HHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSN-YTIYK   78 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~-~~~~~   78 (120)
                      ++||++..++..+.. ....++...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++ ..+.+
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~  179 (465)
T cd07151         100 TREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAK  179 (465)
T ss_pred             HHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHhHHHHHHH
Confidence            467777666554322 1112355578889999999999999999999999999999 69999999999999996 68999


Q ss_pred             HHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          79 IMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        79 ~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++++|+|+|++|++++++.+.++.|++|+.++.|.||||+
T Consensus       180 ~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~  220 (465)
T cd07151         180 IFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGST  220 (465)
T ss_pred             HHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCH
Confidence            99999999999999998777788999999999999999996

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.

>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

Probab=99.95  E-value=1.9e-27  Score=188.90  Aligned_cols=118  Identities=28%  Similarity=0.471  Sum_probs=103.4

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++|+++.+++..+.. .....+...+.+++|+||+++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.++
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~  184 (478)
T cd07131         105 AQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVEL  184 (478)
T ss_pred             HHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHH
Confidence            467777777654322 1122344678999999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|+++++++++.+.++.|..|+++|.|.||||+
T Consensus       185 l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~  224 (478)
T cd07131         185 FAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGST  224 (478)
T ss_pred             HHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence            9999999999999999777789999999999999999996

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.

>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

Probab=99.95  E-value=1.7e-27  Score=189.73  Aligned_cols=117  Identities=28%  Similarity=0.404  Sum_probs=100.9

Q ss_pred             hHHHHHHhhh-cCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTK-YQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++.+.+ ..+.... .+....+.+++|+|||++|+|||||+...++.+++|| +||+||+|||+.+|.++..+.++
T Consensus       106 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~  184 (488)
T TIGR02299       106 FRFFADKCEEAMDGRTYP-VDTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEI  184 (488)
T ss_pred             HHHHHHhHHHhcCCcccc-CCCceEEEEEEecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHHHHHHH
Confidence            4677777662 2222111 2234568889999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|+++++++++.+.++.|..|+.+|.|.||||+
T Consensus       185 ~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~  224 (488)
T TIGR02299       185 AKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGET  224 (488)
T ss_pred             HHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcH
Confidence            9999999999999999777788999999999999999986

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.

>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like

Probab=99.95  E-value=1.4e-27  Score=188.05  Aligned_cols=96  Identities=20%  Similarity=0.155  Sum_probs=89.8

Q ss_pred             ceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH----HhCCCCCcEEEEeCCCh
Q psy1844          24 NSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI----EAGVPPGVVNFVPADGP   98 (120)
Q Consensus        24 ~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~----~ag~p~g~~~~i~~~~~   98 (120)
                      ..+++++|+|||++|+|||||+..+++++++|| +||+||+|||+++|+++..++++++    ++|+|+|++|++++++.
T Consensus        90 ~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aGlP~gvv~~v~g~~~  169 (429)
T cd07121          90 LTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTI  169 (429)
T ss_pred             ceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcCCCcceEEEecCCCh
Confidence            457888999999999999999999999999999 6999999999999999999998885    78999999999998767


Q ss_pred             HHHHHHHhCCCcceEEEecCC
Q psy1844          99 VFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        99 ~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.++.|++|++||.|.||||+
T Consensus       170 ~~~~~L~~~~~v~~I~fTGs~  190 (429)
T cd07121         170 ETTNELMAHPDINLLVVTGGP  190 (429)
T ss_pred             HHHHHHHcCCCccEEEeeCCH
Confidence            789999999999999999996

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.

>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase

Probab=99.95  E-value=2.2e-27  Score=189.09  Aligned_cols=116  Identities=31%  Similarity=0.429  Sum_probs=98.4

Q ss_pred             HHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH
Q psy1844           3 AFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI   81 (120)
Q Consensus         3 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~   81 (120)
                      +|+++...+..+......+....+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.++++
T Consensus       104 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~  183 (484)
T TIGR03240       104 AISIKAYHERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWE  183 (484)
T ss_pred             HHHHHHHHHhcCccccCCCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHH
Confidence            445555544432111112334567888999999999999999999999999999 6999999999999999999999999


Q ss_pred             HhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          82 EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        82 ~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++|+|+|++|++++ +.+.++.|++|+++|.|.||||+
T Consensus       184 ~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~  220 (484)
T TIGR03240       184 KAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSS  220 (484)
T ss_pred             HhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCH
Confidence            99999999999998 56789999999999999999996

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.

>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

Probab=99.95  E-value=2.2e-27  Score=186.61  Aligned_cols=117  Identities=23%  Similarity=0.278  Sum_probs=100.8

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+++.......+.+....+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l  146 (429)
T cd07100          67 CRYYAENAEAFLADEPIETDAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELF  146 (429)
T ss_pred             HHHHHHHHHHhcCCeeccCCCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHH
Confidence            4678877776532111112245578899999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|+++++++++ +.+..|++|++++.|.||||+
T Consensus       147 ~~aglP~gvv~~v~g~~-~~~~~l~~~~~i~~v~fTGs~  184 (429)
T cd07100         147 REAGFPEGVFQNLLIDS-DQVEAIIADPRVRGVTLTGSE  184 (429)
T ss_pred             HHcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcH
Confidence            99999999999999965 567899999999999999996

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.

>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

Probab=99.95  E-value=2e-27  Score=188.40  Aligned_cols=114  Identities=36%  Similarity=0.520  Sum_probs=99.9

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++|+++.+++....    ......+.+++|+||+++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.+++
T Consensus       105 ~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~  180 (466)
T cd07138         105 LRAAADALKDFEFE----ERRGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEIL  180 (466)
T ss_pred             HHHHHHhhhhcccc----ccCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHH
Confidence            45666666554321    1123467789999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|+++++++++.+.++.|++|++++.|.||||+
T Consensus       181 ~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~  219 (466)
T cd07138         181 DEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGST  219 (466)
T ss_pred             HHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcH
Confidence            999999999999999777789999999999999999996

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.

>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase

Probab=99.95  E-value=3e-27  Score=188.10  Aligned_cols=118  Identities=29%  Similarity=0.379  Sum_probs=100.4

Q ss_pred             hHHHHHHhhhcCCCCC--C-C-CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISE--D-P-KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI   76 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~--~-~-~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~   76 (120)
                      ++||++.+++..+...  . + ..+...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l  185 (481)
T TIGR03216       106 FRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLL  185 (481)
T ss_pred             HHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence            4677777765533211  1 1 1134567889999999999999999999999999999 69999999999999999999


Q ss_pred             HHHHHHhCCCCCcEEEEeCCCh-HHHHHHHhCCCcceEEEecCC
Q psy1844          77 YKIMIEAGVPPGVVNFVPADGP-VFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        77 ~~~l~~ag~p~g~~~~i~~~~~-~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .+++.++|+|+|+++++++++. +.++.|..|+++|.|+||||+
T Consensus       186 ~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~  229 (481)
T TIGR03216       186 GEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGET  229 (481)
T ss_pred             HHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCH
Confidence            9999999999999999998654 478889999999999999996

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.

>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like

Probab=99.95  E-value=2.5e-27  Score=187.75  Aligned_cols=118  Identities=29%  Similarity=0.452  Sum_probs=102.8

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++|+++.+++..+.. .....+...+.+++|+||+++|+|||||+..+++.+++|| +||+||+|||+.+|.++..+.++
T Consensus       103 l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~  182 (468)
T cd07088         103 IDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAEL  182 (468)
T ss_pred             HHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHH
Confidence            467777776654322 2122345678889999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|+++++++++.+.++.|..|+++|.|.||||+
T Consensus       183 ~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~  222 (468)
T cd07088         183 VDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGST  222 (468)
T ss_pred             HHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence            9999999999999999777788999999999999999995

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.

>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

Probab=99.95  E-value=2.7e-27  Score=187.14  Aligned_cols=118  Identities=26%  Similarity=0.382  Sum_probs=102.9

Q ss_pred             hHHHHHHhhhcCCCC-CC----CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-ED----PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT   75 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~----~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~   75 (120)
                      ++||++...+..+.. ..    ...+...+.+++|+||+++|+|||||+...++.+++|| +||+||+|||+.+|+++..
T Consensus        86 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~  165 (451)
T cd07146          86 LRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIY  165 (451)
T ss_pred             HHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHH
Confidence            577887776553211 11    11345678899999999999999999999999999999 6999999999999999999


Q ss_pred             HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.++++++|+|+|+++++++++.+.++.|.+|+++|.|.||||+
T Consensus       166 l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~  209 (451)
T cd07146         166 LADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGV  209 (451)
T ss_pred             HHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCH
Confidence            99999999999999999999777789999999999999999986

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=99.95  E-value=2.1e-27  Score=202.08  Aligned_cols=119  Identities=27%  Similarity=0.400  Sum_probs=105.9

Q ss_pred             ChHHHHHHhhhcCC--CCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHH
Q psy1844           1 LNAFFAKELTKYQP--ISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIY   77 (120)
Q Consensus         1 ~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~   77 (120)
                      |++||++.+++..+  ...+...+...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+++|+++..+.
T Consensus       652 ~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~  731 (1038)
T PRK11904        652 FCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAV  731 (1038)
T ss_pred             HHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHH
Confidence            68999999987642  121222345567788999999999999999999999999999 699999999999999999999


Q ss_pred             HHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          78 KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        78 ~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++++|+|+|++|++++++.+.++.|+.|+++++|.||||+
T Consensus       732 ~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~  773 (1038)
T PRK11904        732 KLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGST  773 (1038)
T ss_pred             HHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCH
Confidence            999999999999999999888899999999999999999996

>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like

Probab=99.95  E-value=3.2e-27  Score=185.72  Aligned_cols=118  Identities=27%  Similarity=0.355  Sum_probs=101.4

Q ss_pred             hHHHHHHhhhcCC-CCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQP-ISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++..++... ..+....+...+.+++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.++
T Consensus        68 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~  147 (432)
T cd07105          68 LREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRV  147 (432)
T ss_pred             HHHHHHHHHHhcCeecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHH
Confidence            5778887776422 112112345678899999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCC---hHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADG---PVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~---~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|+++++.   .+.++.|++|+++|.|.||||+
T Consensus       148 ~~~aGlP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~  190 (432)
T cd07105         148 FHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGST  190 (432)
T ss_pred             HHHcCcCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCH
Confidence            999999999999999842   3578999999999999999996

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.

>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

Probab=99.95  E-value=3.5e-27  Score=186.59  Aligned_cols=117  Identities=27%  Similarity=0.401  Sum_probs=101.1

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++|+++...+..+...........+.+++|+||+++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus        87 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~  166 (456)
T cd07107          87 LDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELA  166 (456)
T ss_pred             HHHHHHHHHHhCCccccCCCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHHHHHHHHH
Confidence            4677766655544222122345678899999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++ +|+|++|++++++.+.++.|++|+++++|.||||+
T Consensus       167 ~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~  204 (456)
T cd07107         167 REV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSV  204 (456)
T ss_pred             HHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcH
Confidence            996 99999999999777788999999999999999986

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.

>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

Probab=99.95  E-value=4.2e-27  Score=187.16  Aligned_cols=117  Identities=28%  Similarity=0.464  Sum_probs=101.8

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++.+++..+-. ....++...+++++|+||+++|+|||||+..+++++++|| +||+||+|||+.+|.++..+.++
T Consensus       103 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~  182 (478)
T cd07086         103 CDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKI  182 (478)
T ss_pred             HHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHH
Confidence            467888777764321 1122344678899999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHh----CCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEA----GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~a----g~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++    |+|+|+++++++++. .++.|..|+++|.|.||||+
T Consensus       183 ~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~  225 (478)
T cd07086         183 LAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGST  225 (478)
T ss_pred             HHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcH
Confidence            9999    999999999998654 88999999999999999996

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).

>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

Probab=99.95  E-value=3.6e-27  Score=186.48  Aligned_cols=118  Identities=33%  Similarity=0.473  Sum_probs=102.3

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      +++|+...++..+.. +....+...+.+++|+||+++|+|||||+..+++.+++|| +||+||+|||+++|+++..+.++
T Consensus        89 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~~~~l~~~  168 (457)
T cd07114          89 YRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKL  168 (457)
T ss_pred             HHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchHHHHHHHHH
Confidence            567776666553322 1111345578899999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|+++++++++.+.++.|.+|+++++|.||||+
T Consensus       169 l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~  208 (457)
T cd07114         169 AEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGT  208 (457)
T ss_pred             HHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCH
Confidence            9999999999999999777788999999999999999986

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.

>PLN02174 aldehyde dehydrogenase family 3 member H1

Probab=99.95  E-value=3.9e-27  Score=187.77  Aligned_cols=116  Identities=18%  Similarity=0.155  Sum_probs=97.2

Q ss_pred             hHHHHHHhhhcCC----CCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844           2 NAFFAKELTKYQP----ISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI   76 (120)
Q Consensus         2 ~~~~a~~~~~~~~----~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~   76 (120)
                      ++|+++.+++...    ...........++.++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l  158 (484)
T PLN02174         79 IKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALL  158 (484)
T ss_pred             HHHHHHHHHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHH
Confidence            5678887775432    111112234578999999999999999999999999999999 69999999999999999999


Q ss_pred             HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      ++++++ ++|+|++|+++|. .+.+..+.+ +.+|+|+||||++
T Consensus       159 ~~l~~~-~lp~gvv~vv~G~-~~~~~~l~~-~~vd~V~FTGS~~  199 (484)
T PLN02174        159 AKLLEQ-YLDSSAVRVVEGA-VTETTALLE-QKWDKIFYTGSSK  199 (484)
T ss_pred             HHHHHH-hCCCCEEEEEECC-hHHHHHHhc-ccCCEEEEECChH
Confidence            999999 6999999999984 445677775 8899999999973

>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

Probab=99.95  E-value=2.9e-27  Score=187.01  Aligned_cols=117  Identities=26%  Similarity=0.390  Sum_probs=102.2

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++..++..+.......+...+.+++|+|||++|+|||||+..+++++++|| +||+||+|||+++|.++..+.+++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~~~l~~~~  166 (457)
T cd07090          87 LEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEIL  166 (457)
T ss_pred             HHHHHHHHHHhCCeeeccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHHHHHHHHH
Confidence            5678877776543221112356678899999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .++|+|+|+++++++++ +.++.|+.|+++|+|.||||+
T Consensus       167 ~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~  204 (457)
T cd07090         167 TEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSV  204 (457)
T ss_pred             HHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcH
Confidence            99999999999999854 588999999999999999996

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.

>PRK15398 aldehyde dehydrogenase EutE; Provisional

Probab=99.95  E-value=3.9e-27  Score=187.08  Aligned_cols=98  Identities=20%  Similarity=0.141  Sum_probs=90.6

Q ss_pred             cceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH----HhCCCCCcEEEEeCCC
Q psy1844          23 LNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI----EAGVPPGVVNFVPADG   97 (120)
Q Consensus        23 ~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~----~ag~p~g~~~~i~~~~   97 (120)
                      ...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|.++..++++++    ++|+|+|+++++++.+
T Consensus       121 ~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l~eaGlP~gvv~vv~g~~  200 (465)
T PRK15398        121 GLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPT  200 (465)
T ss_pred             ceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHHHHcCCCCCeEEEecCCC
Confidence            4567888999999999999999999999999999 6999999999999999999999877    5899999999999866


Q ss_pred             hHHHHHHHhCCCcceEEEecCCC
Q psy1844          98 PVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        98 ~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      .+.++.|++|+++|+|+||||++
T Consensus       201 ~~~~~~L~~~~~vd~I~fTGS~~  223 (465)
T PRK15398        201 IETAQRLMKHPGIALLVVTGGPA  223 (465)
T ss_pred             HHHHHHHHcCCCccEEEeeCCHH
Confidence            77889999999999999999963

>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like

Probab=99.95  E-value=3.9e-27  Score=185.66  Aligned_cols=117  Identities=33%  Similarity=0.423  Sum_probs=98.9

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHH-HHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSN-YTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~-~~~~~~   79 (120)
                      ++|+++..++..+.......+...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+++|.++ ..+.++
T Consensus        81 l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~~  160 (443)
T cd07152          81 LHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARL  160 (443)
T ss_pred             HHHHHHhHHHhCCccccccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHHH
Confidence            4566665544332221122345568899999999999999999999999999999 69999999999999996 789999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|++++ +.+.++.|..|+++|.|.||||+
T Consensus       161 ~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~  199 (443)
T cd07152         161 FEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGST  199 (443)
T ss_pred             HHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCH
Confidence            9999999999999998 45688999999999999999996

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=99.95  E-value=1.9e-27  Score=204.92  Aligned_cols=109  Identities=31%  Similarity=0.458  Sum_probs=99.8

Q ss_pred             ChHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           1 LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         1 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      |++||++++++...           ...++|+|||++|+|||||+...++++++|| +||+||+|||+++|+++..+.++
T Consensus       749 flryyA~~a~~~~~-----------~~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~l  817 (1318)
T PRK11809        749 FLRYYAGQVRDDFD-----------NDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRI  817 (1318)
T ss_pred             HHHHHHHHHHHhcC-----------CceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHH
Confidence            68999988875311           2357899999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      ++++|+|+|++|+++|++.+.++.|+.|++|++|.||||++
T Consensus       818 l~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~  858 (1318)
T PRK11809        818 LLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTE  858 (1318)
T ss_pred             HHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHH
Confidence            99999999999999998888899999999999999999963

>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

Probab=99.94  E-value=5.3e-27  Score=185.26  Aligned_cols=118  Identities=32%  Similarity=0.455  Sum_probs=103.3

Q ss_pred             hHHHHHHhhhcCCCC--CC---CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS--ED---PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT   75 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~--~~---~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~   75 (120)
                      ++||++.+++..+..  ..   ...+...+++++|+||+++|+|||||+...++.+++|| +||+||+|||+.+|+++..
T Consensus        89 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~~p~~~~~  168 (453)
T cd07094          89 LRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALE  168 (453)
T ss_pred             HHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHH
Confidence            567788777664321  11   11355678889999999999999999999999999999 6999999999999999999


Q ss_pred             HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++++++|+|+|+++++++++.+.++.|.+|+++|.|.||||+
T Consensus       169 l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~  212 (453)
T cd07094         169 LAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSA  212 (453)
T ss_pred             HHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcH
Confidence            99999999999999999999777789999999999999999996

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.

>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN

Probab=99.94  E-value=3.4e-27  Score=190.27  Aligned_cols=118  Identities=22%  Similarity=0.273  Sum_probs=96.8

Q ss_pred             hHHHHHHhhhcCCCC----CCCCCCc---ceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHH
Q psy1844           2 NAFFAKELTKYQPIS----EDPKSTL---NSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSN   73 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~----~~~~~~~---~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~   73 (120)
                      ++||++++.+..+..    +......   ..+..++|+||+++|+|||||++..++++++|| +||+||+|||+.+|+++
T Consensus       157 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVlKPs~~tpl~~  236 (551)
T TIGR02288       157 VAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHPGAILPL  236 (551)
T ss_pred             HHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEEECCcccchhH
Confidence            467777776653311    1111111   123478999999999999999999999999999 69999999999999976


Q ss_pred             H----HHHHHHHHhCCCCCcEEEEeCC-ChHHHHHHHhCCCcceEEEecCC
Q psy1844          74 Y----TIYKIMIEAGVPPGVVNFVPAD-GPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        74 ~----~~~~~l~~ag~p~g~~~~i~~~-~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .    .+.+++.++|+|+|++|+++++ +.+.++.|+.|++++.|.||||+
T Consensus       237 ~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt  287 (551)
T TIGR02288       237 ALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSN  287 (551)
T ss_pred             HHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCH
Confidence            5    5779999999999999999985 67789999999999999999997

This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.

>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

Probab=99.94  E-value=8e-27  Score=182.97  Aligned_cols=118  Identities=32%  Similarity=0.436  Sum_probs=101.5

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHH-HHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLS-NYTIYK   78 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~-~~~~~~   78 (120)
                      ++++++..++..+.. .....+...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+.+|.+ +..+.+
T Consensus        68 l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~  147 (431)
T cd07104          68 LREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAE  147 (431)
T ss_pred             HHHHHHHHHHhcCccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHH
Confidence            456777666553322 2122455678899999999999999999999999999999 6999999999999998 568999


Q ss_pred             HHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          79 IMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        79 ~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++++|+|+|+++++++++.+.++.|.+|+++|.|.||||+
T Consensus       148 ~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~  188 (431)
T cd07104         148 IFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGST  188 (431)
T ss_pred             HHHHcCCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCH
Confidence            99999999999999999777788999999999999999996

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.

>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

Probab=99.94  E-value=6.3e-27  Score=185.69  Aligned_cols=117  Identities=32%  Similarity=0.465  Sum_probs=101.3

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++..++..... .....+...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+.+|+++..+.++
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~  186 (471)
T cd07139         107 LRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEA  186 (471)
T ss_pred             HHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHH
Confidence            577887776653211 1112345578899999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|+++++++ +.+.++.|..|++++.|.||||+
T Consensus       187 ~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~  225 (471)
T cd07139         187 AEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGST  225 (471)
T ss_pred             HHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcH
Confidence            9999999999999998 45688999999999999999996

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.

>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

Probab=99.94  E-value=1e-26  Score=184.89  Aligned_cols=117  Identities=23%  Similarity=0.366  Sum_probs=97.0

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++|+++..++..+.. +...++...+..++|+||+++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.++
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l  181 (474)
T cd07130         102 CDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKI  181 (474)
T ss_pred             HHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHcCCeEEeeCCccCHHHHHHHHHH
Confidence            456666655543321 2122344567888999999999999999999999999999 69999999999999999887766


Q ss_pred             H----HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 M----IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l----~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +    +++|+|+|++++++++ .+.++.|++|+++|+|.||||+
T Consensus       182 ~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~  224 (474)
T cd07130         182 VARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGST  224 (474)
T ss_pred             HHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECch
Confidence            4    6889999999999985 4578999999999999999996

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.

>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

Probab=99.94  E-value=4e-27  Score=185.73  Aligned_cols=99  Identities=19%  Similarity=0.231  Sum_probs=91.6

Q ss_pred             CCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH----HhCCCCCcEEEEeC
Q psy1844          21 STLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI----EAGVPPGVVNFVPA   95 (120)
Q Consensus        21 ~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~----~ag~p~g~~~~i~~   95 (120)
                      .+.+.+++++|+||+++|+|||||+...++++++|| +||+||+|||+++|+++..+.++++    ++|+|+|+++++++
T Consensus        85 ~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~g~v~~v~g  164 (436)
T cd07122          85 EEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPEGLIQWIEE  164 (436)
T ss_pred             CCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCchhEEEecC
Confidence            345678999999999999999999999999999999 6999999999999999999888865    78999999999998


Q ss_pred             CChHHHHHHHhCCCcceEEEecCC
Q psy1844          96 DGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        96 ~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .+.+.++.|++|+++|.|.||||+
T Consensus       165 ~~~~~~~~l~~~~~v~~v~ftGs~  188 (436)
T cd07122         165 PSIELTQELMKHPDVDLILATGGP  188 (436)
T ss_pred             CChHHHHHHHcCCCcCEEEEcCCH
Confidence            777789999999999999999996

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.

>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=99.94  E-value=1.1e-26  Score=184.64  Aligned_cols=117  Identities=27%  Similarity=0.485  Sum_probs=101.2

Q ss_pred             hHHHHHHhhhcCCCCC-CCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISE-DPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      +++|++.+++..+... ....+...+++++|+||+++|+|||||+...++++++|| +||+||+|||+.+|.++..+.++
T Consensus       108 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~  187 (475)
T PRK13473        108 FRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAEL  187 (475)
T ss_pred             HHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHH
Confidence            4567766665543211 112344568899999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++ +|+|++|++++++.+.++.|.+|+++|.|.||||+
T Consensus       188 ~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~  226 (475)
T PRK13473        188 AADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSI  226 (475)
T ss_pred             HHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence            9999 99999999999777889999999999999999996

>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like

Probab=99.94  E-value=8.8e-27  Score=183.99  Aligned_cols=118  Identities=31%  Similarity=0.454  Sum_probs=102.5

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      +++|++.+.+..+.......+...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+++|+++..+.+++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~~~~l~~~l  167 (455)
T cd07093          88 FRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELA  167 (455)
T ss_pred             HHHHHHhHHHhCCccccCCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHHHHHHHHHH
Confidence            4567776665433222122355678889999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|+++++++++.+.++.|.+|+++|.|.||||+
T Consensus       168 ~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~  206 (455)
T cd07093         168 NEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGET  206 (455)
T ss_pred             HhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCH
Confidence            999999999999999777888999999999999999996

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.

>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

Probab=99.94  E-value=9.8e-27  Score=185.00  Aligned_cols=117  Identities=25%  Similarity=0.393  Sum_probs=99.3

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++|+++..++..+-. ....++...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.++
T Consensus       106 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~  185 (478)
T cd07085         106 VEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAEL  185 (478)
T ss_pred             HHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHH
Confidence            356665554443311 1112345578999999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++++++++ .+.++.|++|+++|.|.||||+
T Consensus       186 l~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~V~fTGs~  224 (478)
T cd07085         186 LQEAGLPDGVLNVVHGG-KEAVNALLDHPDIKAVSFVGST  224 (478)
T ss_pred             HHHhCCCCCcEEEEecC-HHHHHHHhcCCCcCEEEEECCH
Confidence            99999999999999984 5678999999999999999996

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.

>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp

Probab=99.94  E-value=8.6e-27  Score=183.94  Aligned_cols=117  Identities=25%  Similarity=0.345  Sum_probs=101.1

Q ss_pred             hHHHHHHhhhcCC-CCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQP-ISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++|+++.+++... .......+...+.+++|+||+++|+|||||+...++.+++|| +||+||+|||+.+|+++..+.++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~  165 (452)
T cd07102          86 ARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAA  165 (452)
T ss_pred             HHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHH
Confidence            4567776665422 122223444567899999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|+++++++++ +.++.|++|+++|.|.||||+
T Consensus       166 l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~  204 (452)
T cd07102         166 FAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSV  204 (452)
T ss_pred             HHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcH
Confidence            999999999999999976 789999999999999999996

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.

>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase

Probab=99.94  E-value=1.2e-26  Score=184.48  Aligned_cols=117  Identities=23%  Similarity=0.347  Sum_probs=99.5

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++|++....+..+-. ....++...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+++|+++..+.++
T Consensus       106 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~  185 (477)
T TIGR01722       106 VEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAEL  185 (477)
T ss_pred             HHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHHHHHH
Confidence            356666555543321 1122344568899999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++++++++ .+.++.|+.|++++.|.||||+
T Consensus       186 l~~aglP~g~~~~v~g~-~~~~~~L~~~~~v~~V~ftGS~  224 (477)
T TIGR01722       186 FSEAGAPDGVLNVVHGD-KEAVDRLLEHPDVKAVSFVGST  224 (477)
T ss_pred             HHHhCcCCCeEEEEeCC-HHHHHHHHcCCCcCEEEEECCH
Confidence            99999999999999984 5678899999999999999996

In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.

>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

Probab=99.94  E-value=1.2e-26  Score=182.98  Aligned_cols=118  Identities=33%  Similarity=0.502  Sum_probs=102.4

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++|++...++..+.. +...++...+.+++|+||+++|+|||||+...++.+++|| +||+||+|||+.+|.++..+.++
T Consensus        87 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~  166 (451)
T cd07103          87 LEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAEL  166 (451)
T ss_pred             HHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHH
Confidence            466766666543322 2223456678899999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|+++++++++.+.++.|.+|+++|.|+||||+
T Consensus       167 l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~  206 (451)
T cd07103         167 AEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGST  206 (451)
T ss_pred             HHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCH
Confidence            9999999999999999777788999999999999999985

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.

>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1

Probab=99.94  E-value=4e-27  Score=186.40  Aligned_cols=119  Identities=31%  Similarity=0.511  Sum_probs=105.3

Q ss_pred             ChHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           1 LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         1 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      +++||++.+++..+-..+.+.+...+++++|+||+++|+|||||+..+++.+++|| +||+||+|||+.++.++..+.++
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVlkps~~~~~~~~~l~~~  175 (462)
T PF00171_consen   96 FLRYYADAARKLAGEVLPSDPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVVLKPSEQAPLTALLLAEL  175 (462)
T ss_dssp             HHHHHHHHHHHHTEEEEEESTTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEEEEBTTSHHHHHHHHHH
T ss_pred             hhhhhhhcccceehhhcccccccccccccccccceeecccccccccccccchhhhhcccccceeeeccccccccccchhh
Confidence            36889998888655221124778899999999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|++++++++.++.|..|++++.|.||||+
T Consensus       176 ~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~  215 (462)
T PF00171_consen  176 LEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGST  215 (462)
T ss_dssp             HHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEH
T ss_pred             ccccccccccccccccccccccceeeeccccceeeecchh
Confidence            9999999999999999888999999999999999999985

2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....

>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

Probab=99.94  E-value=1.7e-26  Score=185.37  Aligned_cols=118  Identities=26%  Similarity=0.368  Sum_probs=102.5

Q ss_pred             hHHHHHHhhhcCCC-CCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPI-SEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++.+++.... ......+...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+.+|+++..+.++
T Consensus       137 l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~l  216 (518)
T cd07125         137 CRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVEL  216 (518)
T ss_pred             HHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHH
Confidence            46788777764321 11112244568889999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.++|+|+|+++++++++.+.++.|.+|+++|.|.||||+
T Consensus       217 l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~  256 (518)
T cd07125         217 LHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGST  256 (518)
T ss_pred             HHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCH
Confidence            9999999999999999776788999999999999999996

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.

>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like

Probab=99.94  E-value=1.7e-26  Score=182.33  Aligned_cols=117  Identities=26%  Similarity=0.320  Sum_probs=99.6

Q ss_pred             hHHHHHHhhhcCCCC-C-C---CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-E-D---PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT   75 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~-~---~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~   75 (120)
                      ++||++.+.+..+.. . .   ...+...+++++|+|||++|+|||||+...++.+++|| +||+||+|||+.+|.++..
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~  168 (452)
T cd07147          89 FRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALI  168 (452)
T ss_pred             HHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence            467777766543211 1 1   01344567888999999999999999999999999999 6999999999999999999


Q ss_pred             HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.++++++|+|+|++++++++ .+.++.|..|+++|.|.||||+
T Consensus       169 l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~  211 (452)
T cd07147         169 LGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSP  211 (452)
T ss_pred             HHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCH
Confidence            999999999999999999985 4678899999999999999986

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.

>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

Probab=99.94  E-value=2.8e-26  Score=180.90  Aligned_cols=117  Identities=32%  Similarity=0.476  Sum_probs=100.0

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++++++..+...+.. ....++...+.+++|+||+++|+|||||+...++.+++|| +||+||+|||+.+|.++..+.++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~  167 (450)
T cd07092          88 FRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAEL  167 (450)
T ss_pred             HHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHH
Confidence            456666555543321 1112334578899999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++ |+|+|+++++++++.+.++.|++|+++|.|+||||+
T Consensus       168 ~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~  206 (450)
T cd07092         168 AAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSV  206 (450)
T ss_pred             HHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcH
Confidence            999 999999999999777788999999999999999986

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.

>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

Probab=99.94  E-value=3.5e-26  Score=181.53  Aligned_cols=118  Identities=30%  Similarity=0.394  Sum_probs=102.4

Q ss_pred             hHHHHHHhhhcCCCC-CCC----CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDP----KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT   75 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~----~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~   75 (120)
                      ++||++.+++..+-. ...    ..+...+.+++|+||+++|+|||||+...++.+++|| +||+||+|||+.+|.++..
T Consensus       107 l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~~~~~  186 (473)
T cd07082         107 IRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIP  186 (473)
T ss_pred             HHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHH
Confidence            567777776653321 111    1345678899999999999999999999999999999 6999999999999999999


Q ss_pred             HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.++++++|+|+|+++++++++.+.++.|..|+++|.|.||||+
T Consensus       187 l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~  230 (473)
T cd07082         187 LAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGST  230 (473)
T ss_pred             HHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcH
Confidence            99999999999999999999777788999999999999999986

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.

>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

Probab=99.94  E-value=5.4e-26  Score=179.77  Aligned_cols=117  Identities=24%  Similarity=0.372  Sum_probs=100.2

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++|+++...+..+...+...+...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+++|.++..+.+++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~  167 (457)
T cd07108          88 FRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEIL  167 (457)
T ss_pred             HHHHHHHHHHhCCceeccCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHH
Confidence            4566666554433221122345567889999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++ +|+|+++++++++.+.++.|.+|+++|.|+||||+
T Consensus       168 ~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~  205 (457)
T cd07108         168 AQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGST  205 (457)
T ss_pred             HHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcH
Confidence            997 99999999999777788999999999999999996

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.

>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=99.94  E-value=5.3e-26  Score=179.31  Aligned_cols=119  Identities=31%  Similarity=0.469  Sum_probs=100.6

Q ss_pred             hHHHHHHhhhcCCC--CCC--C-CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844           2 NAFFAKELTKYQPI--SED--P-KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT   75 (120)
Q Consensus         2 ~~~~a~~~~~~~~~--~~~--~-~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~   75 (120)
                      ++|+++.+++..+-  ...  + ..+...+.+++|+||+++|+|||||+...++.+++|| +||+||+|||+.+|.++..
T Consensus        89 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~~p~~~~~  168 (453)
T cd07149          89 LRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALK  168 (453)
T ss_pred             HHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCCcchHHHHH
Confidence            45677766554321  110  1 1233457889999999999999999999999999999 6999999999999999999


Q ss_pred             HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      +.++++++|+|+|+++++++++.+.++.|.+|+++|.|.||||++
T Consensus       169 l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~  213 (453)
T cd07149         169 LAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPA  213 (453)
T ss_pred             HHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHH
Confidence            999999999999999999997677789999999999999999963

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=99.93  E-value=2.6e-26  Score=197.52  Aligned_cols=109  Identities=29%  Similarity=0.447  Sum_probs=99.4

Q ss_pred             ChHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           1 LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         1 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      |++||++.+++...           ...++|+||+++|+|||||+...++.+++|| +||+||+|||+++|+++..+.++
T Consensus       657 ~lr~ya~~a~~~~~-----------~~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~l  725 (1208)
T PRK11905        657 FLRYYAAQARRLLN-----------GPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRL  725 (1208)
T ss_pred             HHHHHHHHHHHhcC-----------CceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHH
Confidence            57899988776532           1346799999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      ++++|+|+|++|++++++.+.++.|+.|++|++|.||||++
T Consensus       726 l~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~  766 (1208)
T PRK11905        726 LHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTE  766 (1208)
T ss_pred             HHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHH
Confidence            99999999999999998888999999999999999999963

>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

Probab=99.93  E-value=8.2e-26  Score=178.69  Aligned_cols=116  Identities=24%  Similarity=0.385  Sum_probs=98.8

Q ss_pred             hHHHHHHhhhcCCCC--CCC-CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS--EDP-KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIY   77 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~--~~~-~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~   77 (120)
                      ++||++.+.+...-.  ... ......+.+++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~  165 (454)
T cd07101          86 ARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAV  165 (454)
T ss_pred             HHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHH
Confidence            467777776553211  111 1234678999999999999999999999999999999 699999999999999999999


Q ss_pred             HHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          78 KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        78 ~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++++|+|+|++|++++++.+.++.|.+|  +|.|.||||+
T Consensus       166 ~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~  205 (454)
T cd07101         166 ELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGST  205 (454)
T ss_pred             HHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCH
Confidence            999999999999999999877888999987  6889999996

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).

>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=99.93  E-value=9.9e-26  Score=180.17  Aligned_cols=95  Identities=29%  Similarity=0.466  Sum_probs=91.0

Q ss_pred             ceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHH
Q psy1844          24 NSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGD  102 (120)
Q Consensus        24 ~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~  102 (120)
                      ..+.+++|+||+++|+|||||+..+++++++|| +||+||+|||+.+|.++..++++++++|+|+|++|++++++.+.++
T Consensus       151 ~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~  230 (496)
T PLN00412        151 YCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGD  230 (496)
T ss_pred             eeEEEEecceEEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHH
Confidence            467889999999999999999999999999999 6999999999999999999999999999999999999997777899


Q ss_pred             HHHhCCCcceEEEecC
Q psy1844         103 TITASPYLAGINFTGS  118 (120)
Q Consensus       103 ~l~~~~~i~~v~ftGs  118 (120)
                      .|..|+++|.|.||||
T Consensus       231 ~l~~~~~v~~V~ftGs  246 (496)
T PLN00412        231 FLTMHPGVNCISFTGG  246 (496)
T ss_pred             HHhcCCCcCEEEEeCh
Confidence            9999999999999998

>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like

Probab=99.93  E-value=9e-26  Score=178.63  Aligned_cols=117  Identities=24%  Similarity=0.262  Sum_probs=98.6

Q ss_pred             ChHHHHHHhhhcCCC--CCCC--CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844           1 LNAFFAKELTKYQPI--SEDP--KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT   75 (120)
Q Consensus         1 ~~~~~a~~~~~~~~~--~~~~--~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~   75 (120)
                      +++||++.+++..+-  ....  ..+...+.+++|+|||++|+|||||+...++++++|| +||+||+|||+.+|.++..
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~  145 (449)
T cd07136          66 EINYAIKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKV  145 (449)
T ss_pred             HHHHHHHHHHHHhCCCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHH
Confidence            367888877765321  1111  1244578899999999999999999999999999999 6999999999999999999


Q ss_pred             HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      +.++++++ +|+|++|++++ +.+.+..|++|+ +|.|.||||++
T Consensus       146 l~~~~~~a-lP~gv~~~v~g-~~~~~~~L~~~~-v~~V~fTGS~~  187 (449)
T cd07136         146 IAKIIEET-FDEEYVAVVEG-GVEENQELLDQK-FDYIFFTGSVR  187 (449)
T ss_pred             HHHHHHHh-CCCCEEEEEeC-ChHHHHHHhcCC-CCEEEEECCHH
Confidence            99999998 99999999998 456788888776 99999999963

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.

>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating)

Probab=99.93  E-value=9.8e-26  Score=179.97  Aligned_cols=100  Identities=15%  Similarity=0.104  Sum_probs=91.5

Q ss_pred             CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH----HHHHHHhCCCCCcEEEEe
Q psy1844          20 KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI----YKIMIEAGVPPGVVNFVP   94 (120)
Q Consensus        20 ~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~----~~~l~~ag~p~g~~~~i~   94 (120)
                      +.+...+++++|+||+++|+|||||+.+..+++++|| +||+||+|||+++|.++..+    .++++++|+|+|++|+++
T Consensus        93 ~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~eaGlP~gvv~~v~  172 (488)
T TIGR02518        93 DKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAGAPEGAIGCIT  172 (488)
T ss_pred             CCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHHcCcCcccEEEEc
Confidence            3456678899999999999999999999999999999 79999999999999999984    555578899999999999


Q ss_pred             CCChHHHHHHHhCCCcceEEEecCC
Q psy1844          95 ADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        95 ~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++.+.++.|++|++||+|.||||+
T Consensus       173 g~~~e~~~~L~~~~~vd~V~fTGs~  197 (488)
T TIGR02518       173 VPTIEGTNELMKNKDTSLILATGGE  197 (488)
T ss_pred             CCCHHHHHHHHhCCCcCEEEEeCCH
Confidence            8778899999999999999999996

>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed

Probab=99.93  E-value=9.2e-26  Score=181.37  Aligned_cols=116  Identities=25%  Similarity=0.419  Sum_probs=98.9

Q ss_pred             hHHHHHHhhhcCCC---CCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPI---SEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIY   77 (120)
Q Consensus         2 ~~~~a~~~~~~~~~---~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~   77 (120)
                      ++||++.+.+...-   ..........+.+++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.
T Consensus       122 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~  201 (524)
T PRK09407        122 ARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAV  201 (524)
T ss_pred             HHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH
Confidence            46777776654221   11111235678899999999999999999999999999999 699999999999999999999


Q ss_pred             HHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          78 KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        78 ~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++++|+|+|+++++++++.+.++.|..|  +|.|.||||+
T Consensus       202 ~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~  241 (524)
T PRK09407        202 ELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGST  241 (524)
T ss_pred             HHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCH
Confidence            999999999999999999777788999876  7899999996

>PLN02203 aldehyde dehydrogenase

Probab=99.93  E-value=1.2e-25  Score=179.39  Aligned_cols=116  Identities=20%  Similarity=0.182  Sum_probs=98.8

Q ss_pred             hHHHHHHhhhcCC----CCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844           2 NAFFAKELTKYQP----ISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI   76 (120)
Q Consensus         2 ~~~~a~~~~~~~~----~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~   76 (120)
                      ++|+++.+++...    ..+........+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l  154 (484)
T PLN02203         75 ANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFL  154 (484)
T ss_pred             HHHHHHHHHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHH
Confidence            4677776665522    111112345678999999999999999999999999999999 69999999999999999999


Q ss_pred             HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      .+++++. +|+|++|++++ +.+.++.|..|+ +|.|.||||++
T Consensus       155 ~~~~~~~-lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~  195 (484)
T PLN02203        155 AANIPKY-LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPR  195 (484)
T ss_pred             HHHHHHh-CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHH
Confidence            9999996 99999999998 678899999995 99999999963

>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

Probab=99.93  E-value=1.3e-25  Score=177.02  Aligned_cols=116  Identities=17%  Similarity=0.190  Sum_probs=97.7

Q ss_pred             hHHHHHHhhhcCC-CCCCC----CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844           2 NAFFAKELTKYQP-ISEDP----KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT   75 (120)
Q Consensus         2 ~~~~a~~~~~~~~-~~~~~----~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~   75 (120)
                      ++||++.+.+... .....    ......+++++|+||+++|+|||||+...++++++|| +||+||+|||+.+|.++..
T Consensus        74 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~  153 (436)
T cd07135          74 ILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAAL  153 (436)
T ss_pred             HHHHHHHHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHH
Confidence            5788888776422 11111    1234578899999999999999999999999999999 6999999999999999999


Q ss_pred             HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      +.+++++ |+|+|+++++++++++. ..|+.|+ +|.|.||||++
T Consensus       154 l~~l~~~-~lP~g~v~vv~g~~~~~-~~l~~~~-vd~v~ftGs~~  195 (436)
T cd07135         154 LAELVPK-YLDPDAFQVVQGGVPET-TALLEQK-FDKIFYTGSGR  195 (436)
T ss_pred             HHHHHHH-hCCcCEEEEEcCCchhH-HHHHhCC-CCEEEEECCcH
Confidence            9999999 69999999999866554 5688999 99999999963

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.

>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Probab=99.93  E-value=8e-26  Score=180.89  Aligned_cols=92  Identities=33%  Similarity=0.568  Sum_probs=88.4

Q ss_pred             EeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHHHh
Q psy1844          28 YRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITA  106 (120)
Q Consensus        28 ~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~  106 (120)
                      .++|+|||++|+|||||+...++++++|| +||+||+|||+++|+++..+.++++++|+|+|++|++++++.+.++.|..
T Consensus       157 ~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~  236 (500)
T TIGR01238       157 SVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTS  236 (500)
T ss_pred             eccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhc
Confidence            68999999999999999999999999999 69999999999999999999999999999999999999876678999999


Q ss_pred             CCCcceEEEecCC
Q psy1844         107 SPYLAGINFTGSV  119 (120)
Q Consensus       107 ~~~i~~v~ftGs~  119 (120)
                      |+++|.|+||||+
T Consensus       237 ~~~v~~V~ftGs~  249 (500)
T TIGR01238       237 DPRIAGVAFTGST  249 (500)
T ss_pred             CCCcCeEEEECCH
Confidence            9999999999996

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.

>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

Probab=99.93  E-value=1.7e-25  Score=176.27  Aligned_cols=116  Identities=21%  Similarity=0.202  Sum_probs=97.1

Q ss_pred             hHHHHHHhhhcCC-CC--CC-CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844           2 NAFFAKELTKYQP-IS--ED-PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI   76 (120)
Q Consensus         2 ~~~~a~~~~~~~~-~~--~~-~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~   76 (120)
                      ++||++.+.+... ..  .. .......+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l  147 (432)
T cd07137          68 CKLAIKELKKWMAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALL  147 (432)
T ss_pred             HHHHHHHHHHHhCCcccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHH
Confidence            5788887765321 11  11 12233567899999999999999999999999999999 69999999999999999999


Q ss_pred             HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      .++++++ +|+|++|++++ +.+.++.|++| .+|.|.||||++
T Consensus       148 ~~~~~~~-~P~gvv~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~  188 (432)
T cd07137         148 AKLIPEY-LDTKAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPR  188 (432)
T ss_pred             HHHHHHh-CCcCeEEEEeC-CHHHHHHHHhC-CCCEEEEECChH
Confidence            9999995 99999999999 55678889887 599999999963

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.

>cd07099 ALDH_DDALDH Methylomonas sp

Probab=99.93  E-value=1.7e-25  Score=176.63  Aligned_cols=116  Identities=25%  Similarity=0.350  Sum_probs=99.2

Q ss_pred             hHHHHHHhhhcCCC---CCCC-CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844           2 NAFFAKELTKYQPI---SEDP-KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI   76 (120)
Q Consensus         2 ~~~~a~~~~~~~~~---~~~~-~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~   76 (120)
                      ++|+++.+.+....   .... ..+...+++++|+||+++|+|||||+...++++++|| +||+||+|||+.+|+++..+
T Consensus        86 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~~~~~l  165 (453)
T cd07099          86 IDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELL  165 (453)
T ss_pred             HHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence            46777777665321   1111 2345678899999999999999999999999999999 69999999999999999999


Q ss_pred             HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .++++++|+|+|+++++++++ +.++.|.+| .+|.|.||||+
T Consensus       166 ~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~  206 (453)
T cd07099         166 AEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSV  206 (453)
T ss_pred             HHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCH
Confidence            999999999999999999965 678888887 49999999996

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.

>TIGR00407 proA gamma-glutamyl phosphate reductase

Probab=99.93  E-value=7.7e-26  Score=176.71  Aligned_cols=116  Identities=15%  Similarity=0.165  Sum_probs=96.0

Q ss_pred             hHHHHHHhhhcCCCCCC--CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISED--PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYK   78 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~   78 (120)
                      ++||++..+......+.  ..++.+.+++++|+|||++|+||| | ..+++.+++|| +||+||+|||+++|+++..+++
T Consensus        72 ~~~~a~~a~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~  149 (398)
T TIGR00407        72 VKDVIELADPVGKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVE  149 (398)
T ss_pred             HHHHhcCCCCCcccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHH
Confidence            56777777654211111  124557889999999999999997 6 66888999999 6999999999999999999999


Q ss_pred             H----HHHhCCCCCcEEEEeCCC-hHHHHHHHhCCCcceEEEecCC
Q psy1844          79 I----MIEAGVPPGVVNFVPADG-PVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        79 ~----l~~ag~p~g~~~~i~~~~-~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +    +.++|+|+|++|++++++ ++.++.|..|+++|+|.||||+
T Consensus       150 ~~~~al~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~  195 (398)
T TIGR00407       150 VIQDALAQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGN  195 (398)
T ss_pred             HHHHHHHHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCH
Confidence            9    559999999999999844 4578889999999999999996

The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=99.93  E-value=1.3e-26  Score=183.87  Aligned_cols=109  Identities=32%  Similarity=0.471  Sum_probs=101.0

Q ss_pred             ChHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           1 LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         1 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ||||||++.++..+     +      ..++|+|.+.+|+|||||+......+++|| +||+|+.||.|++|+.+..-.++
T Consensus       217 FlrYYA~~ar~~~g-----~------~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~l  285 (769)
T COG4230         217 FLRYYAGQARDTFG-----N------LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRL  285 (769)
T ss_pred             HHHHHHHHHhcccC-----c------cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHH
Confidence            89999999987422     0      346778999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      ++|+|+|++++++++|+++.++..|..++++++|.||||++
T Consensus       286 l~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTe  326 (769)
T COG4230         286 LHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTE  326 (769)
T ss_pred             HHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHH
Confidence            99999999999999999988999999999999999999974

>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

Probab=99.93  E-value=2.2e-25  Score=176.07  Aligned_cols=117  Identities=26%  Similarity=0.270  Sum_probs=100.2

Q ss_pred             hHHHHHHhhhcC--C--C-CCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844           2 NAFFAKELTKYQ--P--I-SEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT   75 (120)
Q Consensus         2 ~~~~a~~~~~~~--~--~-~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~   75 (120)
                      ++||++.+.+..  .  . ..........+.+++|+|||++|+|||||++.+++++++|| +||+||+|||+++|.++..
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~  145 (442)
T cd07084          66 LRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQI  145 (442)
T ss_pred             HHHHHHHHHhccccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHH
Confidence            467777766431  1  1 11111234678899999999999999999999999999999 7999999999999999999


Q ss_pred             HHHHHHHhCC-CCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          76 IYKIMIEAGV-PPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        76 ~~~~l~~ag~-p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.++++++|+ |+|++++++++++ .++.|++|+++|.|+||||+
T Consensus       146 l~~~l~~ag~~P~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~  189 (442)
T cd07084         146 MVRLLHYAGLLPPEDVTLINGDGK-TMQALLLHPNPKMVLFTGSS  189 (442)
T ss_pred             HHHHHHHhCCCCccceEEeeCCcH-HHHHHHcCCCCCEEEEECCH
Confidence            9999999998 9999999999765 88999999999999999996

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.

>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase

Probab=99.93  E-value=1.8e-25  Score=177.01  Aligned_cols=98  Identities=22%  Similarity=0.260  Sum_probs=88.5

Q ss_pred             cceEEEeccCeEEEEEcCCChhhhh--HHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH----HhCCCCCcEEEEeC
Q psy1844          23 LNSLRYRGLDGFVAAVSPFNFTAIG--GNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI----EAGVPPGVVNFVPA   95 (120)
Q Consensus        23 ~~~~~~~~p~Gvv~~i~p~n~P~~~--~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~----~ag~p~g~~~~i~~   95 (120)
                      ...+.+++|+|||++|+|||||+..  .++++++|| +||+||+|||+.+|.++..+.+++.    ++|+|+|+++++++
T Consensus        97 ~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~l~~aGlP~gvv~~v~g  176 (454)
T cd07129          97 PDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQG  176 (454)
T ss_pred             ccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHHHHHhCCChhheEEeeC
Confidence            3457889999999999999999987  458899999 6999999999999999999888775    88999999999999


Q ss_pred             CChHHHHHHHhCCCcceEEEecCCC
Q psy1844          96 DGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        96 ~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      ++.+.++.|++|++++.|.||||++
T Consensus       177 ~~~~~~~~L~~~~~v~~V~fTGs~~  201 (454)
T cd07129         177 GGREVGVALVKHPAIKAVGFTGSRR  201 (454)
T ss_pred             CcHHHHHHHhcCCCccEEEEeCChH
Confidence            7767899999999999999999963

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.

>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like

Probab=99.93  E-value=2.3e-25  Score=176.50  Aligned_cols=97  Identities=22%  Similarity=0.234  Sum_probs=88.0

Q ss_pred             CcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH----HHhCCCCCcEEEEeCC
Q psy1844          22 TLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM----IEAGVPPGVVNFVPAD   96 (120)
Q Consensus        22 ~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l----~~ag~p~g~~~~i~~~   96 (120)
                      ....+++++|+||+++|+|||||+..++..+++|| +||+||+|||+++|+++..+.+++    +++|+|+|++++++++
T Consensus       111 ~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~  190 (465)
T cd07098         111 YKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCL  190 (465)
T ss_pred             CceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECC
Confidence            34567889999999999999999999999999999 799999999999999998765554    6889999999999996


Q ss_pred             ChHHHHHHHhCCCcceEEEecCC
Q psy1844          97 GPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        97 ~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      + +.++.|..|++++.|.||||+
T Consensus       191 ~-~~~~~L~~~~~v~~V~ftGs~  212 (465)
T cd07098         191 P-ETAEALTSHPVIDHITFIGSP  212 (465)
T ss_pred             H-HHHHHHhcCCCCCEEEEECCH
Confidence            5 789999999999999999996

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.

>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase

Probab=99.93  E-value=1.3e-25  Score=180.12  Aligned_cols=116  Identities=22%  Similarity=0.294  Sum_probs=93.5

Q ss_pred             hHHHHHHhhhcCC---------CCCCCCCC-cceEEEecc-CeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCc
Q psy1844           2 NAFFAKELTKYQP---------ISEDPKST-LNSLRYRGL-DGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTA   69 (120)
Q Consensus         2 ~~~~a~~~~~~~~---------~~~~~~~~-~~~~~~~~p-~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~   69 (120)
                      ++||++.+++...         ..+...+. ...+++++| +|||++|+|||||+..+++++++|| +||+||+|||+.+
T Consensus       104 ~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs~~t  183 (513)
T cd07128         104 LFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATAT  183 (513)
T ss_pred             HHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEECCCCC
Confidence            6789988876531         01101112 235677899 5999999999999999999999999 6999999999999


Q ss_pred             HHHHHHHHHHHHHhC-CCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          70 LLSNYTIYKIMIEAG-VPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        70 ~~~~~~~~~~l~~ag-~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      |+++..+.+++.++| +|+|++|++++++.+.++.+   +.+|+|.||||++
T Consensus       184 p~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~  232 (513)
T cd07128         184 AYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAA  232 (513)
T ss_pred             CHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHH
Confidence            999999999999999 89999999998644333332   5799999999963

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.

>PTZ00381 aldehyde dehydrogenase family protein; Provisional

Probab=99.93  E-value=3.5e-25  Score=176.94  Aligned_cols=94  Identities=21%  Similarity=0.291  Sum_probs=88.4

Q ss_pred             cceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHH
Q psy1844          23 LNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFG  101 (120)
Q Consensus        23 ~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~  101 (120)
                      .+.+++++|+|||++|+|||||+..+++++++|| |||+||+|||+.+|.++..+.++++++ +|+|+++++++ +.+.+
T Consensus       101 ~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~-lp~~~v~vv~g-~~~~~  178 (493)
T PTZ00381        101 GKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY-LDPSYVRVIEG-GVEVT  178 (493)
T ss_pred             CceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEecC-CHHHH
Confidence            4578899999999999999999999999999999 699999999999999999999999996 99999999998 56788


Q ss_pred             HHHHhCCCcceEEEecCC
Q psy1844         102 DTITASPYLAGINFTGSV  119 (120)
Q Consensus       102 ~~l~~~~~i~~v~ftGs~  119 (120)
                      +.|.+|+ +|+|+||||+
T Consensus       179 ~~l~~~~-~d~i~FTGS~  195 (493)
T PTZ00381        179 TELLKEP-FDHIFFTGSP  195 (493)
T ss_pred             HHHHhCC-CCEEEEECCH
Confidence            8899887 9999999996

>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like

Probab=99.93  E-value=3.5e-25  Score=174.48  Aligned_cols=116  Identities=19%  Similarity=0.183  Sum_probs=97.5

Q ss_pred             hHHHHHHhhhcCC-CC--CC-CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844           2 NAFFAKELTKYQP-IS--ED-PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI   76 (120)
Q Consensus         2 ~~~~a~~~~~~~~-~~--~~-~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~   76 (120)
                      ++||++.+.+... ..  .. ...+...+.+++|+|||++|+|||||+..+++.+++|| +||+||+|||+.+|.++..+
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l  147 (434)
T cd07133          68 IKHARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALL  147 (434)
T ss_pred             HHHHHHHHHHHhCCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHH
Confidence            5788877765321 11  10 11244578899999999999999999999999999999 69999999999999999999


Q ss_pred             HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      .++++++ +|+|++++++++ .+.++.|..|+ +|.|.||||++
T Consensus       148 ~~l~~~a-lP~g~~~~v~g~-~~~~~~l~~~~-v~~V~ftGs~~  188 (434)
T cd07133         148 AELLAEY-FDEDEVAVVTGG-ADVAAAFSSLP-FDHLLFTGSTA  188 (434)
T ss_pred             HHHHHHh-CCcCeEEEEeCC-hHHHHHHHhCC-CCEEEEeCchH
Confidence            9999997 999999999984 56788888776 99999999963

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.

>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like

Probab=99.93  E-value=1.6e-25  Score=178.41  Aligned_cols=93  Identities=35%  Similarity=0.599  Sum_probs=87.9

Q ss_pred             EEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHH
Q psy1844          26 LRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTI  104 (120)
Q Consensus        26 ~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l  104 (120)
                      +..++|+|||++|+|||||+...++++++|| +||+||+|||+.+|.++..+.++++++|+|+|+++++++++ +.+..|
T Consensus       142 ~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l  220 (480)
T cd07111         142 LAGWKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSAL  220 (480)
T ss_pred             cccceecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHH
Confidence            3467899999999999999999999999999 69999999999999999999999999999999999999864 678999


Q ss_pred             HhCCCcceEEEecCC
Q psy1844         105 TASPYLAGINFTGSV  119 (120)
Q Consensus       105 ~~~~~i~~v~ftGs~  119 (120)
                      .+|+++|.|.||||+
T Consensus       221 ~~~~~v~~v~ftGs~  235 (480)
T cd07111         221 ANHPGVDKVAFTGST  235 (480)
T ss_pred             hcCCCcCEEEEECCH
Confidence            999999999999996

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.

>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

Probab=99.93  E-value=3.5e-25  Score=174.74  Aligned_cols=114  Identities=31%  Similarity=0.417  Sum_probs=96.9

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++++++.....+...  ...+...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+++|.++..+.+++
T Consensus        87 l~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~  164 (446)
T cd07106          87 LRYTASLDLPDEVIE--DDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELA  164 (446)
T ss_pred             HHHHHhhhhcCcccc--CCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHH
Confidence            356665553221111  12345678999999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++ +|+|++++++++ .+.++.|.+|+++|.|.||||+
T Consensus       165 ~~~-lP~g~~~~v~g~-~~~~~~l~~~~~vd~V~fTGs~  201 (446)
T cd07106         165 QEV-LPPGVLNVVSGG-DELGPALTSHPDIRKISFTGST  201 (446)
T ss_pred             HHh-CCcCeEEEeeCC-hhHHHHHhcCCCCCEEEEECCH
Confidence            996 999999999984 5688999999999999999996

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.

>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

Probab=99.92  E-value=3.2e-25  Score=172.90  Aligned_cols=115  Identities=15%  Similarity=0.156  Sum_probs=98.0

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++++++...+..+... +. ....+++++|+||+++|+|||||+. .++.+++|| +||+||+|||+++|.++..+.+++
T Consensus        73 ~~~~a~~~~~~~~~~~-~~-~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~  149 (397)
T cd07077          73 ERGITASVGHIQDVLL-PD-NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLF  149 (397)
T ss_pred             HHHHHHhcCcccceEe-cC-CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHH
Confidence            3556655444322111 12 3467899999999999999999999 999999999 699999999999999999999999


Q ss_pred             HHh---CCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEA---GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~a---g~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++   |+|+++++++++.+.+.++.|..|+++|.|+||||+
T Consensus       150 ~~~~~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~  191 (397)
T cd07077         150 QAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGR  191 (397)
T ss_pred             HHHhhcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCH
Confidence            987   999999999998667788999999999999999996

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.

>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

Probab=99.92  E-value=4.1e-25  Score=178.33  Aligned_cols=93  Identities=24%  Similarity=0.326  Sum_probs=85.5

Q ss_pred             EEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHH----HHHHHHHHhCCCCCcEEEEeCC-ChHH
Q psy1844          27 RYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNY----TIYKIMIEAGVPPGVVNFVPAD-GPVF  100 (120)
Q Consensus        27 ~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~----~~~~~l~~ag~p~g~~~~i~~~-~~~~  100 (120)
                      .+++|+||+++|+|||||++..+..+++|| +||+||+|||+.+++++.    .+.++|+++|+|+|++|+++++ +.+.
T Consensus       189 ~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~  268 (549)
T cd07127         189 FTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPI  268 (549)
T ss_pred             eEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHH
Confidence            467999999999999999999999999999 699999999999998864    4668999999999999999985 3678


Q ss_pred             HHHHHhCCCcceEEEecCC
Q psy1844         101 GDTITASPYLAGINFTGSV  119 (120)
Q Consensus       101 ~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++.|+.|+++++|.||||+
T Consensus       269 ~~~L~~~p~v~~I~FTGS~  287 (549)
T cd07127         269 AQTLATRPEVRIIDFTGSN  287 (549)
T ss_pred             HHHHHhCCCCCEEEEECCH
Confidence            9999999999999999996

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.

>PRK11903 aldehyde dehydrogenase; Provisional

Probab=99.92  E-value=4.6e-25  Score=177.30  Aligned_cols=117  Identities=22%  Similarity=0.277  Sum_probs=94.5

Q ss_pred             ChHHHHHHhhhcCCCC-CC-C-------CCCcceEEEecc-CeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCc
Q psy1844           1 LNAFFAKELTKYQPIS-ED-P-------KSTLNSLRYRGL-DGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTA   69 (120)
Q Consensus         1 ~~~~~a~~~~~~~~~~-~~-~-------~~~~~~~~~~~p-~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~   69 (120)
                      +++||++.+++..+.. .. .       +.....+..++| +||+++|+|||||+..+++++++|| +||+||+|||+.+
T Consensus       108 ~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs~~t  187 (521)
T PRK11903        108 TLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATAT  187 (521)
T ss_pred             HHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHHHHHHHHHHHHHcCCeEEEEcCCcC
Confidence            3688888877653211 00 0       012224566778 6999999999999999999999999 6999999999999


Q ss_pred             HHHHHHHHHHHHHhC-CCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          70 LLSNYTIYKIMIEAG-VPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        70 ~~~~~~~~~~l~~ag-~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      |+++..+.+++.++| +|+|+++++++++.+..+.|   +++|.|.||||++
T Consensus       188 p~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~  236 (521)
T PRK11903        188 AWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAE  236 (521)
T ss_pred             hHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHH
Confidence            999999999999999 99999999998665554444   7899999999963

>PLN02418 delta-1-pyrroline-5-carboxylate synthase

Probab=99.92  E-value=4.2e-25  Score=182.82  Aligned_cols=113  Identities=16%  Similarity=0.083  Sum_probs=95.5

Q ss_pred             hHHHHHHhhhcCC-CCC-C-CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHH
Q psy1844           2 NAFFAKELTKYQP-ISE-D-PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIY   77 (120)
Q Consensus         2 ~~~~a~~~~~~~~-~~~-~-~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~   77 (120)
                      ++|||+. .+..+ ... . ...+...+++++|+|||++|+||| |+... +++++|| +||+||+|||+.+|+++..++
T Consensus       374 ~~~~a~~-~~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~  450 (718)
T PLN02418        374 IRQLADM-EDPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILH  450 (718)
T ss_pred             HHHHhcC-ccccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHH
Confidence            5677776 33322 211 0 123444788999999999999999 99998 8999999 699999999999999999999


Q ss_pred             HHHHHhCCCCCc----EEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          78 KIMIEAGVPPGV----VNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        78 ~~l~~ag~p~g~----~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++++ +|+|+    +|++++ +.+.++.|..|+.+|+|.||||+
T Consensus       451 ~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt  494 (718)
T PLN02418        451 KVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSN  494 (718)
T ss_pred             HHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCH
Confidence            999999 99996    999997 56789999999999999999996

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=99.92  E-value=8e-25  Score=179.92  Aligned_cols=116  Identities=20%  Similarity=0.310  Sum_probs=94.2

Q ss_pred             hHHHHHHhhhcC--------C-CCCCCC-CCcceEEEeccC-eEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCc
Q psy1844           2 NAFFAKELTKYQ--------P-ISEDPK-STLNSLRYRGLD-GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTA   69 (120)
Q Consensus         2 ~~~~a~~~~~~~--------~-~~~~~~-~~~~~~~~~~p~-Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~   69 (120)
                      ++||++.+++..        + ..+... .....+++++|+ |||++|+|||||+..+++++++|| +||+||+|||+.+
T Consensus       104 ~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs~~t  183 (663)
T TIGR02278       104 LFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPT  183 (663)
T ss_pred             HHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcc
Confidence            688888887631        1 111111 123467899997 999999999999999999999999 6999999999999


Q ss_pred             HHHHHHHHHHHHHhC-CCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          70 LLSNYTIYKIMIEAG-VPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        70 ~~~~~~~~~~l~~ag-~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      |+++..+.+++.++| +|+|++|+++++.   .+.+..++.+|.|.||||++
T Consensus       184 p~~~~~l~~~~~~aG~lP~gv~~~v~g~~---~~~~~~~~~~~~V~FTGS~~  232 (663)
T TIGR02278       184 AYVAEALVRTMVESGLLPEGSLQLICGSA---GDLLDHLDHRDVVAFTGSAA  232 (663)
T ss_pred             hHHHHHHHHHHHHhCCCCCCcEEEEeCCh---HHHHhcCCCCCEEEEECCHH
Confidence            999999999999999 9999999999852   23333347789999999963

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional

Probab=99.92  E-value=1.5e-24  Score=182.55  Aligned_cols=99  Identities=17%  Similarity=0.239  Sum_probs=92.0

Q ss_pred             CCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH----HhCCCCCcEEEEeC
Q psy1844          21 STLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI----EAGVPPGVVNFVPA   95 (120)
Q Consensus        21 ~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~----~ag~p~g~~~~i~~   95 (120)
                      +....+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|.++..++++++    ++|+|+|+++++++
T Consensus        98 ~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~l~~aG~p~g~v~vv~g  177 (862)
T PRK13805         98 DEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDAAVAAGAPKDIIQWIEE  177 (862)
T ss_pred             CCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHHHHHcCcCcccEEEecC
Confidence            455678999999999999999999999999999999 6999999999999999999888875    57999999999998


Q ss_pred             CChHHHHHHHhCCCcceEEEecCC
Q psy1844          96 DGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        96 ~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++.+.++.|++|+++|+|+||||+
T Consensus       178 ~~~~~~~~L~~~~~vd~I~fTGs~  201 (862)
T PRK13805        178 PSVELTNALMNHPGIALILATGGP  201 (862)
T ss_pred             CCHHHHHHHHcCCCccEEEecCCH
Confidence            777889999999999999999996

>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

Probab=99.92  E-value=2.2e-24  Score=169.52  Aligned_cols=115  Identities=23%  Similarity=0.256  Sum_probs=96.9

Q ss_pred             hHHHHHHhhhcCC---CCCC-CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844           2 NAFFAKELTKYQP---ISED-PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI   76 (120)
Q Consensus         2 ~~~~a~~~~~~~~---~~~~-~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~   76 (120)
                      ++|+++.+++...   .... ...+.+.+.+++|+|||++|+|||||+...++.+++|| +||+||+|||+.+|+++..+
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l  146 (426)
T cd07087          67 IDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALL  146 (426)
T ss_pred             HHHHHHHHHHHhCCcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHH
Confidence            4667776664421   1111 12344678899999999999999999999999999999 69999999999999999999


Q ss_pred             HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .+++++ |+|+|++++++++ .+.++.|++|+ +|.|.||||+
T Consensus       147 ~~~~~~-~~P~gv~~vv~g~-~~~~~~l~~~~-v~~V~ftGs~  186 (426)
T cd07087         147 AKLIPK-YFDPEAVAVVEGG-VEVATALLAEP-FDHIFFTGSP  186 (426)
T ss_pred             HHHHHH-hCCCCEEEEEeCC-chHHHHHHhCC-CCEEEEeCCh
Confidence            999999 6999999999985 45688999998 9999999996

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=99.91  E-value=1.8e-24  Score=178.18  Aligned_cols=93  Identities=20%  Similarity=0.354  Sum_probs=82.6

Q ss_pred             eEEEeccC-eEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhC-CCCCcEEEEeCCChHHH
Q psy1844          25 SLRYRGLD-GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAG-VPPGVVNFVPADGPVFG  101 (120)
Q Consensus        25 ~~~~~~p~-Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag-~p~g~~~~i~~~~~~~~  101 (120)
                      .+..++|+ |||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++.++| +|+|++|+++++..   
T Consensus       141 ~~~~~~p~~GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~---  217 (675)
T PRK11563        141 GRHILTPLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG---  217 (675)
T ss_pred             ceEEEeecCceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH---
Confidence            46777886 999999999999999999999999 6999999999999999999999999999 99999999998532   


Q ss_pred             HHHHhCCCcceEEEecCCC
Q psy1844         102 DTITASPYLAGINFTGSVP  120 (120)
Q Consensus       102 ~~l~~~~~i~~v~ftGs~~  120 (120)
                      +.+..++++++|.||||++
T Consensus       218 ~~~~~~~~i~~v~FTGS~~  236 (675)
T PRK11563        218 DLLDHLDGQDVVTFTGSAA  236 (675)
T ss_pred             HHhhcCCCCCEEEEECcHH
Confidence            3333346799999999963

>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

Probab=99.91  E-value=1.7e-24  Score=169.43  Aligned_cols=97  Identities=22%  Similarity=0.239  Sum_probs=86.4

Q ss_pred             CcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH----HhCCCCCcEEEEeCC
Q psy1844          22 TLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI----EAGVPPGVVNFVPAD   96 (120)
Q Consensus        22 ~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~----~ag~p~g~~~~i~~~   96 (120)
                      +...+++++|+|||++|+|| +| ..+++++++|| +||+||+|||+++|+++..+.++++    ++|+|+|++|+++++
T Consensus       100 ~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l~~aG~P~gvv~~v~g~  177 (406)
T cd07079         100 GLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEALEEAGLPEDAVQLIPDT  177 (406)
T ss_pred             ccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHHHHcCCCcccEEEecCC
Confidence            34678899999999999997 56 67889999999 6999999999999999999999987    789999999999985


Q ss_pred             Ch-HHHHHHHhCCCcceEEEecCCC
Q psy1844          97 GP-VFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        97 ~~-~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      +. +.++.|.+||++|+|.||||++
T Consensus       178 ~~~~~~~~l~~~~~v~~i~fTGS~~  202 (406)
T cd07079         178 DREAVQELLKLDDYIDLIIPRGGAG  202 (406)
T ss_pred             ChHHHHHHHcCCCCccEEEeCCCHH
Confidence            44 5688899999999999999963

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).

>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like

Probab=99.91  E-value=5.1e-24  Score=167.88  Aligned_cols=95  Identities=23%  Similarity=0.254  Sum_probs=89.2

Q ss_pred             CcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHH
Q psy1844          22 TLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVF  100 (120)
Q Consensus        22 ~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~  100 (120)
                      +...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|.++..+.++++++ +|+|+++++++ +.+.
T Consensus        91 ~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~~v~g-~~~~  168 (433)
T cd07134          91 GTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVAVFEG-DAEV  168 (433)
T ss_pred             CCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEEeC-ChhH
Confidence            44678999999999999999999999999999999 699999999999999999999999999 99999999998 4568


Q ss_pred             HHHHHhCCCcceEEEecCC
Q psy1844         101 GDTITASPYLAGINFTGSV  119 (120)
Q Consensus       101 ~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++.|++|+ ++.|.||||+
T Consensus       169 ~~~l~~~~-v~~v~ftGs~  186 (433)
T cd07134         169 AQALLELP-FDHIFFTGSP  186 (433)
T ss_pred             HHHHHhCC-CCEEEEECCh
Confidence            88999998 9999999996

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.

>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional

Probab=99.91  E-value=4.2e-24  Score=167.73  Aligned_cols=97  Identities=22%  Similarity=0.245  Sum_probs=85.1

Q ss_pred             CcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH----HHhCCCCCcEEEEeCC
Q psy1844          22 TLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM----IEAGVPPGVVNFVPAD   96 (120)
Q Consensus        22 ~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l----~~ag~p~g~~~~i~~~   96 (120)
                      +...+++++|+|||++|+||| | ..+++.+++|| +||+||+|||+.+|.++..+++++    +++|+|+|++|++++.
T Consensus       106 ~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l~~~~l~~aGlP~gv~~~v~g~  183 (417)
T PRK00197        106 GLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAVIQEALEEAGLPADAVQLVETT  183 (417)
T ss_pred             CceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHHHHHHHHHHHHcCcChhhEEEecCC
Confidence            346789999999999999986 4 67888999999 699999999999999999988885    6889999999999964


Q ss_pred             C-hHHHHHHHhCCCcceEEEecCCC
Q psy1844          97 G-PVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        97 ~-~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      + ++.++.|.+|+++|+|.||||++
T Consensus       184 ~~~~~~~~l~~~~~v~~V~fTGS~~  208 (417)
T PRK00197        184 DRAAVGELLKLDGYVDVIIPRGGAG  208 (417)
T ss_pred             ChHHHHHHhccCCCccEEEecCCHH
Confidence            4 44778888899999999999963

>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

Probab=99.91  E-value=1.1e-23  Score=166.48  Aligned_cols=116  Identities=14%  Similarity=0.139  Sum_probs=94.3

Q ss_pred             hHHHHHHhhhcCC-CCCC---CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844           2 NAFFAKELTKYQP-ISED---PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI   76 (120)
Q Consensus         2 ~~~~a~~~~~~~~-~~~~---~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~   76 (120)
                      ++|+++.+++... ....   .......+..++|+|||++|+|||||+...++++++|| +||+||+|||+.+|.++..+
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l  146 (443)
T cd07132          67 IKYAISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLL  146 (443)
T ss_pred             HHHHHHHHHHHhCCccCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHH
Confidence            3566666665421 1111   11234578899999999999999999999999999999 69999999999999999999


Q ss_pred             HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      .++++++ +|+|+++++++++. ....+.. +++|.|.||||++
T Consensus       147 ~~~~~~~-lp~gv~~vv~g~~~-~~~~l~~-~~vd~V~fTGs~~  187 (443)
T cd07132         147 AELIPKY-LDKECYPVVLGGVE-ETTELLK-QRFDYIFYTGSTS  187 (443)
T ss_pred             HHHHHHh-CCcCeEEEEeCCHH-HHHHHHh-CCCCEEEEECChH
Confidence            9999986 99999999999544 4566775 4899999999963

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.

>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily

Probab=99.91  E-value=2e-23  Score=160.61  Aligned_cols=118  Identities=31%  Similarity=0.509  Sum_probs=103.2

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++|+++.+++..... .....+...+.+++|+||+++|.|||||+...++.+++|| +||+||+|||+.++.++..+.++
T Consensus        62 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~  141 (367)
T cd06534          62 FRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAEL  141 (367)
T ss_pred             HHHHHHHHHHhcCCcccccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHH
Confidence            466777776654321 2234556678899999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|+++++++++++.++.|..|+++|.|.||||+
T Consensus       142 l~~ag~p~~~v~~~~~~~~~~~~~l~~~~~vd~v~~tGs~  181 (367)
T cd06534         142 LQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGST  181 (367)
T ss_pred             HHhcCCCcCeEEEEEcCchhHHHHHhcCCCcCEEEEECCH
Confidence            9999999999999999777788999999999999999985

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri

>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family

Probab=99.90  E-value=3.5e-23  Score=162.17  Aligned_cols=118  Identities=31%  Similarity=0.528  Sum_probs=100.8

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++++++.+++..... .....+...+.+++|+||+++|+|||||+...++.+++|| +||+||+|||++++.++..+.++
T Consensus        66 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~  145 (432)
T cd07078          66 FRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAEL  145 (432)
T ss_pred             HHHHHHHHHHhcCccccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHH
Confidence            345555555542211 2223456678889999999999999999999999999999 79999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      |+++|+|+|+++++++++++.++.|..|+++|.|.||||.
T Consensus       146 l~~ag~p~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~  185 (432)
T cd07078         146 LAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGST  185 (432)
T ss_pred             HHHcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence            9999999999999999766688999999999999999985

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer

>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase

Probab=99.89  E-value=3.6e-23  Score=171.35  Aligned_cols=94  Identities=19%  Similarity=0.125  Sum_probs=85.1

Q ss_pred             CcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCC----cEEEEeCC
Q psy1844          22 TLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPG----VVNFVPAD   96 (120)
Q Consensus        22 ~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g----~~~~i~~~   96 (120)
                      +...+++++|+|||++|+||| |+.. ++++++|| |||+||+|||+.+|.++..+.++++++ +|+|    +++++++ 
T Consensus       388 ~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~a-lp~g~~~~~~~~v~~-  463 (715)
T TIGR01092       388 NLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNAILHKVITEA-IPIHVGKKLIGLVTS-  463 (715)
T ss_pred             CceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHHH-cCCCCCCcEEEEeCC-
Confidence            334678999999999999999 9988 58999999 699999999999999999999999999 9987    6899985 


Q ss_pred             ChHHHHHHHhCCCcceEEEecCC
Q psy1844          97 GPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        97 ~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++.++.|..|+.+|+|+||||+
T Consensus       464 ~~~~~~~l~~~~~vd~I~fTGS~  486 (715)
T TIGR01092       464 REEIPDLLKLDDVIDLVIPRGSN  486 (715)
T ss_pred             hHHHHHHHhcCCCccEEEEcCCH
Confidence            56678889999999999999996

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.

>KOG2456|consensus

Probab=99.89  E-value=5.8e-23  Score=158.14  Aligned_cols=98  Identities=17%  Similarity=0.208  Sum_probs=88.8

Q ss_pred             CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCCh
Q psy1844          20 KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGP   98 (120)
Q Consensus        20 ~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~   98 (120)
                      +-..+.++..+|.|||++|+|||||+..++.+++.|| |||+||+||||-++.++..+++++-++ ++++.++++.|.-.
T Consensus        93 t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~~~VV~Ggv~  171 (477)
T KOG2456|consen   93 TFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDLIRVVNGGVP  171 (477)
T ss_pred             cccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcceEEEecCCCc
Confidence            3457789999999999999999999999999999999 699999999999999999999999999 99999999999544


Q ss_pred             HHHHHHHhCCCcceEEEecCCC
Q psy1844          99 VFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        99 ~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      | +..|.++ ++|+|+||||++
T Consensus       172 E-Tt~LL~~-rfD~IfyTGsp~  191 (477)
T KOG2456|consen  172 E-TTELLKQ-RFDHIFYTGSPR  191 (477)
T ss_pred             h-HHHHHHh-hccEEEecCCch
Confidence            4 5555556 799999999974

>KOG2455|consensus

Probab=99.81  E-value=3.5e-20  Score=144.02  Aligned_cols=117  Identities=74%  Similarity=1.170  Sum_probs=102.7

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhccccCCCeEEeecCCCcHHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMI   81 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~alaGN~vv~k~~~~~~~~~~~~~~~l~   81 (120)
                      +.+|+.++.+.+.+.. ..+--+...+|+-.|-|.+|+||||-....--..+|||+||.|+||||..+.+++..+.++|+
T Consensus       169 na~ya~eL~~~qpi~~-~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaLMGN~VLwkPS~ta~lssYii~~il~  247 (561)
T KOG2455|consen  169 NAKYASELYAQQPISQ-TKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAALSSYIIYRILR  247 (561)
T ss_pred             hHHHHHHhhhcCCccc-cCCCCcceeeccccceeEEecccceeeeccccccChhhhcceeeecccchhHHHHHHHHHHHH
Confidence            3445555555555443 345567788888889999999999998888888899999999999999999999999999999


Q ss_pred             HhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          82 EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        82 ~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      |||+|+|++|++++++...++.+.+++++.++.||||+
T Consensus       248 EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~  285 (561)
T KOG2455|consen  248 EAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSV  285 (561)
T ss_pred             HcCCCccceeeccCCCCeecceeccCcccceeeeeccc
Confidence            99999999999999999999999999999999999996

>KOG2454|consensus

Probab=99.79  E-value=1.4e-19  Score=139.40  Aligned_cols=94  Identities=24%  Similarity=0.307  Sum_probs=87.2

Q ss_pred             eEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHh----CCCCCcEEEEeCCChH
Q psy1844          25 SLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEA----GVPPGVVNFVPADGPV   99 (120)
Q Consensus        25 ~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~a----g~p~g~~~~i~~~~~~   99 (120)
                      .++.++|+||++.|.|||||++..+.++++|| +||++|+|.||++.++.....++++.+    |-|+++++++++- .|
T Consensus       182 ~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itcl-pd  260 (583)
T KOG2454|consen  182 SRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCL-PD  260 (583)
T ss_pred             ceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecC-cc
Confidence            57889999999999999999999999999999 899999999999999999877776654    9999999999994 57


Q ss_pred             HHHHHHhCCCcceEEEecCC
Q psy1844         100 FGDTITASPYLAGINFTGSV  119 (120)
Q Consensus       100 ~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .+++|.+|+.++++.|.||.
T Consensus       261 ~a~~ltSh~g~khitFiGSq  280 (583)
T KOG2454|consen  261 TAEALTSHSGVKHITFIGSQ  280 (583)
T ss_pred             hHhHhhcCCCcceEEEecCc
Confidence            89999999999999999996

>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC

Probab=99.76  E-value=2e-18  Score=135.84  Aligned_cols=94  Identities=15%  Similarity=0.105  Sum_probs=83.7

Q ss_pred             CcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCC----CcEEEEe--
Q psy1844          22 TLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPP----GVVNFVP--   94 (120)
Q Consensus        22 ~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~----g~~~~i~--   94 (120)
                      ....+++++|+||+++|+|||||+ ..++.++.|| +||++|+|||+.+|.++..+.+++.++ +|+    +.++++.  
T Consensus       103 ~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~~-~p~~~~~~~~~vv~~~  180 (422)
T cd07080         103 GRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLADV-DPNHPLTDSISVVYWP  180 (422)
T ss_pred             CCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHhc-CCCCcccceEEEEEec
Confidence            456688899999999999999999 6888899999 699999999999999999999999999 787    8888884  


Q ss_pred             CCChHHHHHHHhCCCcceEEEecCC
Q psy1844          95 ADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        95 ~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      |.+++.++.|.+++  |.|+||||+
T Consensus       181 g~~~~~~~~l~~~~--D~i~~~Gs~  203 (422)
T cd07080         181 GGDAELEERILASA--DAVVAWGGE  203 (422)
T ss_pred             CCchHHHHHHHHhC--CEEEEeCCH
Confidence            54556888898887  999999996

Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.

>KOG2452|consensus

Probab=99.60  E-value=1e-15  Score=120.78  Aligned_cols=99  Identities=23%  Similarity=0.335  Sum_probs=80.3

Q ss_pred             hHHHHHHhhhcCCCCCC----CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhccccCCCeEEeecCCCcHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISED----PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIY   77 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~alaGN~vv~k~~~~~~~~~~~~~   77 (120)
                      .||||++++|+++...+    -++....+++++|+|||++|+|||||+.++.|+.+++||--                ..
T Consensus       530 ~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~aaclaa~----------------~~  593 (881)
T KOG2452|consen  530 FRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQ----------------VL  593 (881)
T ss_pred             HHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHHHHHHHH----------------Hh
Confidence            48999999999874422    23445689999999999999999999999999888777311                11


Q ss_pred             HHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          78 KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        78 ~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      ++.    --.|++|+++|.+.-+++.|.+||+++.|.||||++
T Consensus       594 k~~----e~sgvini~~gsgslvg~rls~hpdvrkigftgste  632 (881)
T KOG2452|consen  594 KFA----ELTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTE  632 (881)
T ss_pred             hhh----hhcceEEEecCCcchhccccccCCccceeccccchH
Confidence            222    236899999999988999999999999999999974

>KOG2453|consensus

Probab=99.56  E-value=3.8e-15  Score=113.35  Aligned_cols=118  Identities=19%  Similarity=0.300  Sum_probs=99.8

Q ss_pred             hHHHHHHhhhcCC-CCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH----
Q psy1844           2 NAFFAKELTKYQP-ISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT----   75 (120)
Q Consensus         2 ~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~----   75 (120)
                      |+|.....+..++ +.+.+.+++..+..+.|+|++++|+.+|||-..--|.-..+| +||+|+|||++++|+++..    
T Consensus       123 cdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAvtkl  202 (507)
T KOG2453|consen  123 CDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKL  202 (507)
T ss_pred             HHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHHHHHH
Confidence            4444455555555 346678889999999999999999999999998889888888 8999999999999988775    


Q ss_pred             HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCCC
Q psy1844          76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP  120 (120)
Q Consensus        76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~~  120 (120)
                      +.+.|.+-..|++.+...+| +.|.++++..+.++..+.||||++
T Consensus       203 IaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQ  246 (507)
T KOG2453|consen  203 IAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQ  246 (507)
T ss_pred             HHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchh
Confidence            55666666899999999999 567999999999999999999975

>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=99.09  E-value=2.6e-10  Score=88.65  Aligned_cols=98  Identities=19%  Similarity=0.247  Sum_probs=82.0

Q ss_pred             CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHH----hCCCCCcEEEEe
Q psy1844          20 KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIE----AGVPPGVVNFVP   94 (120)
Q Consensus        20 ~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~----ag~p~g~~~~i~   94 (120)
                      +.+.+.+.++.|+||+++|  +..-...+....+-+| .||+||+|.+..+..++..+.+++++    +|+|++.+|.++
T Consensus       103 ~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~~i~~aL~~~~lP~~aVqli~  180 (417)
T COG0014         103 PNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVEVIQEALEKAGLPADAVQLIE  180 (417)
T ss_pred             CCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHHHHHHHHHHcCCCHHHhhhcc
Confidence            5778899999999999999  5555666777777788 79999999999999999988877664    599999999999


Q ss_pred             CCChH-HHHHHHhCCCcceEEEecCC
Q psy1844          95 ADGPV-FGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        95 ~~~~~-~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ..+++ +.+.|..+..+|.|.-.||.
T Consensus       181 ~~~R~~v~~ll~l~~yiD~iIPRGg~  206 (417)
T COG0014         181 DTDREEVLELLRLDGYIDLVIPRGGA  206 (417)
T ss_pred             CCCHHHHHHHHhhcCceeEEEcCCcH
Confidence            85444 56667777779999999985

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=98.52  E-value=1e-07  Score=83.54  Aligned_cols=86  Identities=19%  Similarity=0.142  Sum_probs=63.6

Q ss_pred             CCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEe
Q psy1844          16 SEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVP   94 (120)
Q Consensus        16 ~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~   94 (120)
                      .++|+++.+.+...+. |++++|+|||   ...+.++.+|| +||.|++||+++++.       .+  +.+|..+.+.+ 
T Consensus      1064 LPGPTGEsN~L~l~~R-G~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~--~~Lp~~~~~~~- 1129 (1208)
T PRK11905       1064 LPGPTGESNLLSLHPR-GRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------AL--ADLPGLVAARI- 1129 (1208)
T ss_pred             CCCCCCcceeEEecCC-ceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HH--HhCcccccccc-
Confidence            3567888888888775 9999999999   44677899999 699999999998762       11  12344444333 


Q ss_pred             CCChHHHHHHHhCCCcceEEEecCC
Q psy1844          95 ADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        95 ~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                          ..++.+.++++|++|.|+|++
T Consensus      1130 ----~~~~~~~~~~~i~~V~~~G~~ 1150 (1208)
T PRK11905       1130 ----DWTQDWEADDPFAGALLEGDA 1150 (1208)
T ss_pred             ----ccccccccCCcccEEEEeCCH
Confidence                233467777889999999985

>KOG4165|consensus

Probab=98.43  E-value=7e-07  Score=68.46  Aligned_cols=97  Identities=22%  Similarity=0.194  Sum_probs=81.5

Q ss_pred             CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhccccC-CCeEEeecCCCcHHHHHHHHHHHHHh----CCCCCcEEEEe
Q psy1844          20 KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEA----GVPPGVVNFVP   94 (120)
Q Consensus        20 ~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~ala-GN~vv~k~~~~~~~~~~~~~~~l~~a----g~p~g~~~~i~   94 (120)
                      ..+...+....|+||.++|  |..-.-.+....+-|++ ||.+++|....+..+...+.++..++    |+|.+.++++.
T Consensus       100 adgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~al~~~~~~~~aV~LV~  177 (433)
T KOG4165|consen  100 ADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLVQEALGTHGGPGKAVQLVT  177 (433)
T ss_pred             cCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHHHHHhhhccCchhhhhhee
Confidence            4556678888999999999  55555555566666774 99999999999999999999998887    78999999999


Q ss_pred             CCChHHHHHHHhCCCcceEEEecCC
Q psy1844          95 ADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        95 ~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      . ++|+.+.|..+.-||.|.-.||+
T Consensus       178 s-REev~dLl~ld~~IDLvIPRGSs  201 (433)
T KOG4165|consen  178 S-REEVSDLLKLDDYIDLVIPRGSS  201 (433)
T ss_pred             c-HHHHHHHhhhhhheeEEecCCcH
Confidence            7 67788888888889999999986

>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins

Probab=98.38  E-value=2.4e-06  Score=67.34  Aligned_cols=92  Identities=14%  Similarity=0.115  Sum_probs=74.7

Q ss_pred             eEEEeccCeEEEEEcCCChhhhhHHhhhccccCCCeEEeecCCCcHHHHHHHHHHHHHhCCCC----CcEEEE--eCCCh
Q psy1844          25 SLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPP----GVVNFV--PADGP   98 (120)
Q Consensus        25 ~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~alaGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~----g~~~~i--~~~~~   98 (120)
                      .+.++.|.|++++|.|.|-|.......+...|+||..|+|.|+..+..+..+.+.|.+. .|.    ..+.++  .+.+.
T Consensus        81 ~~~~~~p~g~v~Hi~agNvp~~~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~d~  159 (399)
T PF05893_consen   81 GYVRAFPRGLVFHIAAGNVPLVGFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGGDE  159 (399)
T ss_pred             chhhccCCceEEEEcCCCccchHHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCCch
Confidence            67788999999999999999998888888888999999999999999999999999887 333    345555  34344


Q ss_pred             HHHHHHHhCCCcceEEEecCC
Q psy1844          99 VFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        99 ~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +..+.+.  ...|.+...||.
T Consensus       160 ~~~~~~~--~~~D~vv~wGgd  178 (399)
T PF05893_consen  160 ELEEALS--QQADAVVAWGGD  178 (399)
T ss_pred             HHHHHHH--HHCCEEEEeCCH
Confidence            5566665  358999999984

The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=95.07  E-value=0.033  Score=50.11  Aligned_cols=49  Identities=16%  Similarity=0.186  Sum_probs=37.6

Q ss_pred             CCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCC
Q psy1844          16 SEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDT   68 (120)
Q Consensus        16 ~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~   68 (120)
                      .++|++++|.|...+. |+++++.+-.-   ..+..+.+++ +||.+|+..++.
T Consensus      1173 LPGPTGE~N~l~l~pR-g~vLcl~~~~~---~~~~Ql~Aala~Gn~~v~~~~~~ 1222 (1318)
T PRK11809       1173 LPGPTGERNTYTLLPR-ERVLCLADTEQ---DALTQLAAVLAVGSQALWPDDAL 1222 (1318)
T ss_pred             CCCCCCCcceeeccCC-CcEEEeCCCHH---HHHHHHHHHHHhCCEEEEeCCch
Confidence            3667888998888876 99999987332   5677888888 599998875543

>COG0521 MoaB Molybdopterin biosynthesis enzymes [Coenzyme metabolism]

Probab=80.03  E-value=6.5  Score=27.74  Aligned_cols=49  Identities=20%  Similarity=0.194  Sum_probs=37.3

Q ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEeCCChHHHHHH---HhCCCcceEEEecCC
Q psy1844          70 LLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTI---TASPYLAGINFTGSV  119 (120)
Q Consensus        70 ~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l---~~~~~i~~v~ftGs~  119 (120)
                      -.+...+.+.|+++|.......++..+....-..+   +... +|.|..||++
T Consensus        26 D~sG~~l~~~L~~ag~~~~~~~iV~D~~~~I~~~l~~~~~~~-~DvvlttGGT   77 (169)
T COG0521          26 DKSGPLLVELLEEAGHNVAAYTIVPDDKEQIRATLIALIDED-VDVVLTTGGT   77 (169)
T ss_pred             ccchhHHHHHHHHcCCccceEEEeCCCHHHHHHHHHHHhcCC-CCEEEEcCCc
Confidence            45778899999999999988888887544444443   3344 9999999986

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	120
3v9g_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		2e-42
3v9i_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		2e-42
3v9h_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		2e-42
3v9j_A	563	Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat		4e-42
4f9i_A	1026	Crystal Structure Of Proline Utilization A (Puta) F		6e-11
2bhp_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		9e-11
1uzb_A	516	1-pyrroline-5-carboxylate Dehydrogenase Length = 51		9e-11
2bja_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		9e-11
3qan_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		7e-09
3i44_A	497	Crystal Structure Of Aldehyde Dehydrogenase From Ba		1e-08
3jz4_C	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		2e-08
3jz4_A	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		2e-08
3rjl_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		3e-08
3ed6_A	520	1.7 Angstrom Resolution Crystal Structure Of Betain		3e-08
4i8p_A	520	Crystal Structure Of Aminoaldehyde Dehydrogenase 1a		9e-08
1o9j_A	501	The X-Ray Crystal Structure Of Eta-Crystallin Lengt		1e-07
4a0m_A	496	Crystal Structure Of Betaine Aldehyde Dehydrogenase		2e-07
3haz_A	1001	Crystal Structure Of Bifunctional Proline Utilizati		2e-07
1bi9_A	499	Retinal Dehydrogenase Type Two With Nad Bound Lengt		2e-07
3k2w_A	497	Crystal Structure Of Betaine-Aldehyde Dehydrogenase		2e-07
3prl_A	505	Crystal Structure Of Nadp-Dependent Glyceraldehyde-		3e-07
2wme_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		3e-07
2wox_A	489	Betaine Aldehyde Dehydrogenase From Pseudomonas Aer		3e-07
3zqa_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		3e-07
2xdr_A	489	Crystallographic Structure Of Betaine Aldehyde Dehy		3e-07
2wme_C	490	Crystallographic Structure Of Betaine Aldehyde Dehy		3e-07
1bxs_A	501	Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad		4e-07
4dng_A	485	Crystal Structure Of Putative Aldehyde Dehydrogenas		7e-07
3r64_A	508	Crystal Structure Of A Nad-Dependent Benzaldehyde D		8e-07
1euh_A	475	Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase		1e-06
2esd_A	475	Crystal Structure Of Thioacylenzyme Intermediate Of		1e-06
1qi1_A	475	Ternary Complex Of An Nadp Dependent Aldehyde Dehyd		1e-06
1a4s_A	503	Betaine Aldehyde Dehydrogenase From Cod Liver Lengt		1e-06
2w8n_A	487	The Crytal Structure Of The Oxidized Form Of Human		2e-06
2w8p_A	487	The Crystal Structure Of Human C340a Ssadh Length =		2e-06
3inl_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		2e-06
1o05_A	500	Apo Form Of Human Mitochondrial Aldehyde Dehydrogen		2e-06
1zum_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		2e-06
1cw3_A	494	Human Mitochondrial Aldehyde Dehydrogenase Complexe		2e-06
3n80_A	500	Human Mitochondrial Aldehyde Dehydrogenase, Apo For		2e-06
2onn_A	500	Arg475gln Mutant Of Human Mitochondrial Aldehyde De		2e-06
4fr8_A	500	Crystal Structure Of Human Aldehyde Dehydrogenase-2		2e-06
1nzw_A	500	Cys302ser Mutant Of Human Mitochondrial Aldehyde De		2e-06
3rhm_A	517	Crystal Structure Of The E673q Mutant Of C-Terminal		2e-06
2o2p_A	517	Crystal Structure Of The C-Terminal Domain Of Rat 1		2e-06
2id2_A	475	Gapn T244s Mutant X-Ray Structure At 2.5 A Length =		2e-06
3rhj_A	517	Crystal Structure Of The E673a Mutant Of The C-Term		3e-06
2opx_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		3e-06
2hg2_A	479	Structure Of Lactaldehyde Dehydrogenase Length = 47		3e-06
3rhr_A	517	Crystal Structure Of The C707a Mutant Of The C-Term		3e-06
2imp_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		3e-06
1ag8_A	499	Aldehyde Dehydrogenase From Bovine Mitochondria Len		3e-06
3ifg_A	484	Crystal Structure Of Succinate-Semialdehyde Dehydro		4e-06
4e4g_A	521	Crystal Structure Of Putative Methylmalonate-Semial		5e-06
4gnz_A	517	Crystal Structure Of The C707s Mutant Of C-terminal		6e-06
3rhl_A	517	Crystal Structure Of The E673aC707A DOUBLE MUTANT O		6e-06
1wnb_A	495	Escherichia Coli Ydcw Gene Product Is A Medium-Chai		8e-06
3n81_A	500	T244a Mutant Of Human Mitochondrial Aldehyde Dehydr		8e-06
3r31_A	517	Crystal Structure Of Betaine Aldehyde Dehydrogenase		1e-05
3ty7_A	478	Crystal Structure Of Aldehyde Dehydrogenase Family		1e-05
3pqa_A	486	Crystal Structure Of Glyceraldehyde-3-Phosphate Deh		1e-05
2d4e_A	515	Crystal Structure Of The Hpcc From Thermus Thermoph		2e-05
3ju8_A	490	Crystal Structure Of Succinylglutamic Semialdehyde		3e-05
3iwj_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 2		3e-05
3ek1_A	504	Crystal Structure Of Aldehyde Dehydrogenase From Br		4e-05
3iwk_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 1		6e-05
4dal_A	498	Crystal Structure Of Putative Aldehyde Dehydrogenas		6e-05
3u4j_A	528	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		2e-04
4i9b_A	517	Structure Of Aminoaldehyde Dehydrogenase 1 From Sol		3e-04
4i8q_A	514	Structure Of The Aminoaldehyde Dehydrogenase 1 E260		3e-04
3efv_A	462	Crystal Structure Of A Putative Succinate-Semialdeh		4e-04
1t90_A	486	Crystal Structure Of Methylmalonate Semialdehyde De		6e-04

>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566

Iteration: 1
 Score =  166 bits (421), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 80/120 (66%), Positives = 98/120 (81%), Gaps = 2/120 (1%)
Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
            NA +A EL   QPIS  P +  NS  YRGL+GFVAA+SPFNFTAIGGNLA  PALMG+ 
Sbjct: 175 FNAKYAVELEGQQPISVPPST--NSTVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNV 232
Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTA+L++Y +Y+I+ EAG+PP ++ FVPADGP+FGDT+T+S +L GINFTGSVP
Sbjct: 233 VLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVP 292

>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566

Iteration: 1
 Score =  166 bits (421), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 80/120 (66%), Positives = 98/120 (81%), Gaps = 2/120 (1%)
Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
            NA +A EL   QPIS  P +  NS  YRGL+GFVAA+SPFNFTAIGGNLA  PALMG+ 
Sbjct: 175 FNAKYAVELEGQQPISVPPST--NSTVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNV 232
Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTA+L++Y +Y+I+ EAG+PP ++ FVPADGP+FGDT+T+S +L GINFTGSVP
Sbjct: 233 VLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVP 292

>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566

Iteration: 1
 Score =  166 bits (421), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 80/120 (66%), Positives = 98/120 (81%), Gaps = 2/120 (1%)
Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
            NA +A EL   QPIS  P +  NS  YRGL+GFVAA+SPFNFTAIGGNLA  PALMG+ 
Sbjct: 175 FNAKYAVELEGQQPISVPPST--NSTVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNV 232
Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTA+L++Y +Y+I+ EAG+PP ++ FVPADGP+FGDT+T+S +L GINFTGSVP
Sbjct: 233 VLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTGSVP 292

>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563

Iteration: 1
 Score =  166 bits (419), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 80/120 (66%), Positives = 96/120 (80%), Gaps = 2/120 (1%)
Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
            NA FA EL   QPIS  P +  N   YRGL+GFVAA+SPFNFTAIGGNLA  PALMG+ 
Sbjct: 172 FNAKFAVELEGEQPISVPPST--NHTVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNV 229
Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           VLWKPSDTA+L++Y +Y+I+ EAG+PP ++ FVPADGP FGDT+T+S +L GINFTGSVP
Sbjct: 230 VLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVP 289

>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 4   FFAKELTKY---QPISEDPKSTLNSLRYRGLDGFVAAVSPFNFT-AIGGNLAYTPALMGS 59
           ++A+E+ +    Q +   P   LN   Y    G  A ++P+NF  AI   +A    + G+
Sbjct: 638 YYAREMIRLGQPQRVGHAP-GELNHYFYEP-KGVAAVIAPWNFPLAISMGMASAAIVTGN 695
Query: 60  SVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119
            V++KPS    +  + + ++  EAG+P GV NF P  G V GD +   P ++ I FTGS+
Sbjct: 696 CVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSM 755

>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 38  VSPFNF-TAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD 96
           ++P+NF  AI   +   P  +G++V+ KP++ A++    +++I  EAG PPGVVNF+P  
Sbjct: 180 IAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGV 239
Query: 97  GPVFGDTITASPYLAGINFTGSV 119
           G   G  +   P +  INFTGS+
Sbjct: 240 GEEVGAYLVEHPRIRFINFTGSL 262

>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 38  VSPFNF-TAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD 96
           ++P+NF  AI   +   P  +G++V+ KP++ A++    +++I  EAG PPGVVNF+P  
Sbjct: 180 IAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGV 239
Query: 97  GPVFGDTITASPYLAGINFTGSV 119
           G   G  +   P +  INFTGS+
Sbjct: 240 GEEVGAYLVEHPRIRFINFTGSL 262

>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 38  VSPFNF-TAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD 96
           ++P+NF  AI   +   P  +G++V+ KP++ A++    +++I  EAG PPGVVNF+P  
Sbjct: 180 IAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGV 239
Query: 97  GPVFGDTITASPYLAGINFTGSV 119
           G   G  +   P +  INFTGS+
Sbjct: 240 GEEVGAYLVEHPRIRFINFTGSL 262

>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFT-AIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    +SP+NF  AI    A  P + G++V+ KP+ T  +      +++ +AG+P GV+N
Sbjct: 174 GVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVIN 233
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
           +VP  G   GD +   P  + I FTGS
Sbjct: 234 YVPGSGAEVGDYLVDHPKTSLITFTGS 260

>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V  ++P+N+      L   PAL+ G +++ KPS+ A LS     +I+ EA +P GV N
Sbjct: 163 GVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFN 222
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            +  DG   G  ++A P L  I+FTGS
Sbjct: 223 LINGDGANVGSYLSAHPDLEMISFTGS 249

>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G  AA++P+NF A        PAL  G +++ KP+     S   + ++ I AGVP GV N
Sbjct: 147 GVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFN 206
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            V       G+ +T++P +  ++FTGS
Sbjct: 207 VVTGSAGAVGNELTSNPLVRKLSFTGS 233

>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G  AA++P+NF A        PAL  G +++ KP+     S   + ++ I AGVP GV N
Sbjct: 147 GVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFN 206
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            V       G+ +T++P +  ++FTGS
Sbjct: 207 VVTGSAGAVGNELTSNPLVRKLSFTGS 233

>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFT-AIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    + P+NF  AI       P + G++V+ KP+  A +      +++ E+G+P GVVN
Sbjct: 174 GVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESGLPKGVVN 233
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
           FVP  G   GD +   P  + I FTGS
Sbjct: 234 FVPGSGAEVGDYLVDHPKTSIITFTGS 260

>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V  ++P+N+  +  +    PAL  G S++ KPS+   L+   ++++M E G P G +N
Sbjct: 172 GVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTIN 231
Query: 92  FVPADGPVFGDTITASPYLAGINFTGSV 119
            +   G   GD ++    +  ++FTG +
Sbjct: 232 LILGAGSEVGDVMSGHKEVDLVSFTGGI 259

>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 6   AKELTKYQ--PISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVL 62
           A+ L K Q  P+S  P  T      R   G V  ++P+N+  +       PAL  G + +
Sbjct: 142 AEALDKRQNSPVSL-PMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAV 200
Query: 63  WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
            KPS+ A ++   +  I  E G+P GV+N V   GP  G  ++A P +  + FTGS
Sbjct: 201 LKPSELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGS 256

>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    + P+N   I       PAL  G++V+ KP++   L+   +  ++ EAG PPGVVN
Sbjct: 161 GVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVN 220
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            VP  GP  G  I++   +  + FTGS
Sbjct: 221 IVPGYGPTAGAAISSHMDVDKVAFTGS 247

>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V  +SP+N+  +       PAL  G + + KPS+ A ++     ++  E G+PPGV+N
Sbjct: 150 GVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELASVTCLEFGEVCNEVGLPPGVLN 209
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            +   GP  G  + + P +  I FTGS
Sbjct: 210 ILTGLGPDAGAPLVSHPDVDKIAFTGS 236

>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 19  PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIY 77
           P    N+L  RG   FVA +SP+NF         T ALM G+SV+ KP++          
Sbjct: 638 PTGESNALTMRGRGVFVA-ISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAV 696
Query: 78  KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
            ++ EAG+P   +  V  DG + G  +TA P +AG+ FTGS
Sbjct: 697 ALLHEAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGS 736

>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    + P+NF  +       PAL  G++V+ KP++   LS   +  ++ EAG PPGVVN
Sbjct: 159 GVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVN 218
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            +P  GP  G  I +   +  I FTGS
Sbjct: 219 ILPGYGPTAGAAIASHIGIDKIAFTGS 245

>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V  ++ +NF          PAL+ G++++ KP+    L+   + +I  EAG+P GV+N
Sbjct: 150 GVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLN 209
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            +   G V G T+  SP    I  TGS
Sbjct: 210 VINGTGSVVGQTLCESPITKMITMTGS 236

>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V A+SPFN+          PAL+ G++V++KP+    LS   + + + +AG P G++ 
Sbjct: 154 GVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQ 213
Query: 92  FVPADGPVFGDTITASP 108
            V   G V GD +   P
Sbjct: 214 VVTGRGSVIGDHLVEHP 230

>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G VA +  +N+          PAL  G+++++KPS+   L+   + +I  EAGVP GV N
Sbjct: 144 GVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFN 203
Query: 92  FVPADGPVFGDTITASPYLAGINFTG 117
            +   G   G  +T  P +  I+FTG
Sbjct: 204 VLTGSGREVGQWLTEHPLIEKISFTG 229

>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G VA +  +N+          PAL  G+++++KPS+   L+   + +I  EAGVP GV N
Sbjct: 143 GVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFN 202
Query: 92  FVPADGPVFGDTITASPYLAGINFTG 117
            +   G   G  +T  P +  I+FTG
Sbjct: 203 VLTGSGREVGQWLTEHPLIEKISFTG 228

>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G VA +  +N+          PAL  G+++++KPS+   L+   + +I  EAGVP GV N
Sbjct: 144 GVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFN 203
Query: 92  FVPADGPVFGDTITASPYLAGINFTG 117
            +   G   G  +T  P +  I+FTG
Sbjct: 204 VLTGSGREVGQWLTEHPLIEKISFTG 229

>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G VA +  +N+          PAL  G+++++KPS+   L+   + +I  EAGVP GV N
Sbjct: 143 GVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFN 202
Query: 92  FVPADGPVFGDTITASPYLAGINFTG 117
            +   G   G  +T  P +  I+FTG
Sbjct: 203 VLTGSGREVGQWLTEHPLIEKISFTG 228

>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G VA +  +N+          PAL  G+++++KPS+   L+   + +I  EAGVP GV N
Sbjct: 144 GVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFN 203
Query: 92  FVPADGPVFGDTITASPYLAGINFTG 117
            +   G   G  +T  P +  I+FTG
Sbjct: 204 VLTGSGREVGQWLTEHPLIEKISFTG 229

>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    + P+NF  +       PAL  G++V+ KP++   L+   +  ++ EAG PPGVVN
Sbjct: 161 GVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVN 220
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            VP  GP  G  I++   +  + FTGS
Sbjct: 221 IVPGYGPTAGAAISSHMDVDKVAFTGS 247

>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 5   FAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLW 63
           +  EL   + +  D +   N + YR   G ++++SPFNF       +  PA+ +G+SV+ 
Sbjct: 118 YTGELGGVKEVPSDIEGKTNKI-YRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVH 176
Query: 64  KPS-DTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           KP   TA+     I K    AG+P GV+N +  D    GD +  +P    I+FTGS
Sbjct: 177 KPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGS 232

>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 28  YRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKP-SDTALLSNYTIYKIMIEAGV 85
           YR   G V  +SP+NF       +  PAL +G++V+ KP SDT +       +I  EAGV
Sbjct: 145 YRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGV 204
Query: 86  PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           P GV++ V   G   GD          I+FTGS P
Sbjct: 205 PAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTP 239

>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALMGSSVL-WKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V A+SPFN+          PAL+  +V+ +KP     +S   + +   EAG+P GV N
Sbjct: 145 GLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFN 204
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            +   G   GD I     +  INFTGS
Sbjct: 205 TITGRGSEIGDYIVEHQAVNFINFTGS 231

>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALMGSSVL-WKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V A+SPFN+          PAL+  +V+ +KP     +S   + +   EAG+P GV N
Sbjct: 145 GLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFN 204
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            +   G   GD I     +  INFTGS
Sbjct: 205 TITGRGSEIGDYIVEHQAVNFINFTGS 231

>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALMGSSVL-WKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V A+SPFN+          PAL+  +V+ +KP     +S   + +   EAG+P GV N
Sbjct: 145 GLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFN 204
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            +   G   GD I     +  INFTGS
Sbjct: 205 TITGRGSEIGDYIVEHQAVNFINFTGS 231

>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G  A +  +N+  +       PAL  G++V++KPS    ++   + +I  EAGVP G+VN
Sbjct: 157 GVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVN 216
Query: 92  FVPADGPVFGDTITASPYLAGINFTGSVP 120
            V   G   G  +   P +A ++FTGSVP
Sbjct: 217 VVQG-GAETGSLLCHHPNVAKVSFTGSVP 244

>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 4   FFAKELTK-YQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTA------IGGNLAYTPAL 56
           +F++E  + Y  I   P     +L  +   G  A ++P+NF +      +G  LA     
Sbjct: 118 WFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALA----- 172
Query: 57  MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPA---DGPVFGDTITASPYLAGI 113
            G +V+ KP++    S   + ++  +AG+P GV N +P    +    G+ I   P ++ I
Sbjct: 173 AGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKI 232
Query: 114 NFTGS 118
           +FTGS
Sbjct: 233 SFTGS 237

>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 4   FFAKELTK-YQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTA------IGGNLAYTPAL 56
           +F++E  + Y  I   P     +L  +   G  A ++P+NF +      +G  LA     
Sbjct: 118 WFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALA----- 172
Query: 57  MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPA---DGPVFGDTITASPYLAGI 113
            G +V+ KP++    S   + ++  +AG+P GV N +P    +    G+ I   P ++ I
Sbjct: 173 AGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKI 232
Query: 114 NFTGS 118
           +FTGS
Sbjct: 233 SFTGS 237

>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    + P+NF  +       PAL  G+ V+ K ++   L+   +  ++ EAG PPGVVN
Sbjct: 160 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 219
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            VP  GP  G  I +   +  + FTGS
Sbjct: 220 IVPGFGPTAGAAIASHEDVDKVAFTGS 246

>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    + P+NF  +       PAL  G+ V+ K ++   L+   +  ++ EAG PPGVVN
Sbjct: 160 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 219
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            VP  GP  G  I +   +  + FTGS
Sbjct: 220 IVPGFGPTAGAAIASHEDVDKVAFTGS 246

>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    + P+NF  +       PAL  G+ V+ K ++   L+   +  ++ EAG PPGVVN
Sbjct: 160 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 219
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            VP  GP  G  I +   +  + FTGS
Sbjct: 220 IVPGFGPTAGAAIASHEDVDKVAFTGS 246

>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    + P+NF  +       PAL  G+ V+ K ++   L+   +  ++ EAG PPGVVN
Sbjct: 154 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 213
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            VP  GP  G  I +   +  + FTGS
Sbjct: 214 IVPGFGPTAGAAIASHEDVDKVAFTGS 240

>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    + P+NF  +       PAL  G+ V+ K ++   L+   +  ++ EAG PPGVVN
Sbjct: 160 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 219
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            VP  GP  G  I +   +  + FTGS
Sbjct: 220 IVPGFGPTAGAAIASHEDVDKVAFTGS 246

>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    + P+NF  +       PAL  G+ V+ K ++   L+   +  ++ EAG PPGVVN
Sbjct: 160 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 219
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            VP  GP  G  I +   +  + FTGS
Sbjct: 220 IVPGFGPTAGAAIASHEDVDKVAFTGS 246

>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    + P+NF  +       PAL  G+ V+ K ++   L+   +  ++ EAG PPGVVN
Sbjct: 160 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 219
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            VP  GP  G  I +   +  + FTGS
Sbjct: 220 IVPGFGPTAGAAIASHEDVDKVAFTGS 246

>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    + P+NF  +       PAL  G+ V+ K ++   L+   +  ++ EAG PPGVVN
Sbjct: 160 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 219
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            VP  GP  G  I +   +  + FTGS
Sbjct: 220 IVPGFGPTAGAAIASHEDVDKVAFTGS 246

>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    V P+N+  +  +      L  G++V+ KP+    L+     ++ ++AG+P GVVN
Sbjct: 180 GVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVN 239
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            +P  G + G  ++  P +  I FTGS
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGS 266

>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    V P+N+  +  +      L  G++V+ KP+    L+     ++ ++AG+P GVVN
Sbjct: 180 GVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVN 239
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            +P  G + G  ++  P +  I FTGS
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGS 266

>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALMGSSVL-WKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V A+SPFN+          PAL+  +V+ +KP     +S   + +   EAG+P GV N
Sbjct: 145 GLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFN 204
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            +   G   GD I     +  INF+GS
Sbjct: 205 TITGRGSEIGDYIVEHQAVNFINFSGS 231

>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    V P+N+  +  +      L  G++V+ KP+    L+     ++ ++AG+P GVVN
Sbjct: 180 GVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVN 239
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            +P  G + G  ++  P +  I FTGS
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGS 266

>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 24  NSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIE 82
           N L ++   G    + P+NF          PAL+ G++++ KPS+    +     KI+ E
Sbjct: 135 NILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE 194
Query: 83  AGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119
            G+P GV N V   G   G  +  +P +A ++ TGSV
Sbjct: 195 IGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSV 231

>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 24  NSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIE 82
           N L ++   G    + P+NF          PAL+ G++++ KPS+    +     KI+ E
Sbjct: 135 NILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE 194
Query: 83  AGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119
            G+P GV N V   G   G  +  +P +A ++ TGSV
Sbjct: 195 IGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSV 231

>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    V P+N+  +  +      L  G++V+ KP+    L+     ++ ++AG+P GVVN
Sbjct: 180 GVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVN 239
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            +P  G + G  ++  P +  I FTGS
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGS 266

>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 24  NSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIE 82
           N L ++   G    + P+NF          PAL+ G++++ KPS+    +     KI+ E
Sbjct: 135 NILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE 194
Query: 83  AGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119
            G+P GV N V   G   G  +  +P +A ++ TGSV
Sbjct: 195 IGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSV 231

>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    + P+NF  +       PAL  G+ V+ K ++   L+   +  ++ EAG PPGVVN
Sbjct: 159 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 218
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            +P  GP  G  I +   +  + FTGS
Sbjct: 219 VIPGFGPTAGAAIASHEDVDKVAFTGS 245

>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G  AA++P+NF A        PAL  G  ++ KP+++   S   +  +   AGVP GV++
Sbjct: 150 GVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLS 209
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            V  D    G  IT++P +  ++FTGS
Sbjct: 210 VVIGDPKAIGTEITSNPIVRKLSFTGS 236

>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G  A ++PFNF        + PA+  G++ + KPS+        + ++ IEAG+P G++N
Sbjct: 164 GIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIRLAELXIEAGLPAGILN 223
Query: 92  FVPAD-GPVFGDTITASPYLAGINFTGSVP 120
            V  D G V  D I   P +A ++F GS P
Sbjct: 224 VVNGDKGAV--DAILTHPDIAAVSFVGSTP 251

>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 58  GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTG 117
           G++V+ KP+    L+     ++ ++AG+P GVVN +P  G + G  ++  P +  I FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 118 S 118
           S
Sbjct: 266 S 266

>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 58  GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTG 117
           G++V+ KP+    L+     ++ ++AG+P GVVN +P  G + G  ++  P +  I FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 118 S 118
           S
Sbjct: 266 S 266

>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G VA+++P+N+  +       PAL  G+ V+ KPS+   L+   + ++  +   P GVVN
Sbjct: 161 GVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVN 219
Query: 92  FVPADGPVFGDTITASPYLAGINFTGSV 119
            +   G   GD +T  P +  ++ TGS+
Sbjct: 220 ILFGRGKTVGDPLTGHPKVRMVSLTGSI 247

>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    + P+NF  +       PAL  G+ V+ K ++   L+   +  ++ EAG PPGVVN
Sbjct: 160 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 219
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            VP  GP  G  I +   +  + F GS
Sbjct: 220 IVPGFGPTAGAAIASHEDVDKVAFAGS 246

>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 34/139 (24%)
Query: 13  QPISE----DPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYT--------------- 53
           +PI E    DP S  ++  + G  G   +    ++  +GG+ AYT               
Sbjct: 104 KPIQETIVADPTSGADAFEFFG--GIAPSALNGDYIPLGGDFAYTKRVPLGVCVGIGAWN 161
Query: 54  -----------PALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFG 101
                      PAL+ G+++++KPS+   L    I +I+IEAG+P G+ N +  D    G
Sbjct: 162 YPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDT-G 220
Query: 102 DTITASPYLAGINFTGSVP 120
             +   P +A ++ TGSVP
Sbjct: 221 PLLVNHPDVAKVSLTGSVP 239

>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G    ++P+NF     +L    A   GS V+ KPS+    +   + +I  + GVP GV N
Sbjct: 141 GVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFN 200
Query: 92  FVPADGPVFGDTITASPYLAGINFTGSVP 120
            V  DG   G+ ++  P +   +FTGS P
Sbjct: 201 LVNGDGAGVGNPLSEHPKVRXXSFTGSGP 229

>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 1   LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGS 59
           L AF+ KE  + + I  D +        R   G V A++PFNF          PA+  G+
Sbjct: 104 LAAFYVKE-HRDEVIPSDDRLIFTR---REPVGIVGAITPFNFPLNLSAHKIAPAIATGN 159
Query: 60  SVLWKPSDTALLSNYTIYKIMIEA----GVPPGVVNFVPADGPVFGDTITASPYLAGINF 115
            ++  PS  A L    + KI+  A     VP GV N +   G V GD I  +  +  I+F
Sbjct: 160 VIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISF 219
Query: 116 TGS 118
           TGS
Sbjct: 220 TGS 222

>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V  ++P+N   +       PAL  G++V+ KP++ +  +   + +I+ EA +PPGV N
Sbjct: 164 GPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFN 223
Query: 92  FVPADGPVFGDTITASPYLAGINFTG 117
            V   G   G  + A P +  +  TG
Sbjct: 224 LVQGFGEEAGAALVAHPLVPLLTLTG 249

>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G VA   P+NF     N    PAL+ G+ V++KPS+          K  I+AG+P GV+N
Sbjct: 141 GVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLN 200
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            V   G   G  + A   L G+ FTGS
Sbjct: 201 LVQG-GRETGVALAAHRGLDGLFFTGS 226

>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Query: 3   AFFAKELTKYQ--PISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSS 60
           A  A++L   Q  P+S  P  T  S   R   G V  ++P+N+  +       PAL    
Sbjct: 122 ADLAEKLDARQKAPVSL-PMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGC 180
Query: 61  V-LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
             + KPS+ A L+   + +I  E G+PPGV+N +   GP  G  +   P +  + FTGS
Sbjct: 181 AAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGS 239

>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G  AA++P+NF A        PAL  G +++ +P+D   L+   +  +  +AG+P GV+ 
Sbjct: 170 GVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQ 229
Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            V       G  +T++  +  ++FTGS
Sbjct: 230 IVTGKAREIGAELTSNDTVRKLSFTGS 256

>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 24/129 (18%)
Query: 3   AFFAKELTKYQ--PISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGS- 59
           A  A+EL   Q  PIS  P  T  S   +   G VA ++P+N+          P LM + 
Sbjct: 122 AGLAEELDSKQKAPISL-PMDTFKSYILKEPIGVVALITPWNY----------PFLMATW 170
Query: 60  ----------SVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPY 109
                     + + KPS+ A ++   + +I  E G+P GV+N V   G   G ++ + P 
Sbjct: 171 KIAPALAAGCAAILKPSELASVTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPD 230
Query: 110 LAGINFTGS 118
           +  I+FTGS
Sbjct: 231 VDKISFTGS 239

>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPALMG-SSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V +++P+N+          PA+ G ++V++KPS+   L+   + +++ +  +P GVVN
Sbjct: 163 GIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVN 221
Query: 92  FVPADGPVFGDTITASPYLAGINFTGSV 119
            +   G   G+ +   P +  ++ TG +
Sbjct: 222 VITGRGETVGNALINHPKVGXVSITGDI 249

>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V  ++P+NF  I  +     A+  G +V+ KPS+    ++  + ++  EAG+P GV N
Sbjct: 163 GVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFN 222
Query: 92  FVPADGPVFGDTITASPYLAGINFTGSV 119
            V   G   G  +   P +  + FTGSV
Sbjct: 223 VVTGYGDPAGQVLAEDPNVDXVAFTGSV 250

>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 64  KPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           KPS+ A ++   + +I  E G+P G +N +   GP  G  + + P++  I+FTGS P
Sbjct: 198 KPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGP 254

>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 64  KPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           KPS+ A ++   + +I  E G+P G +N +   GP  G  + + P++  I+FTGS P
Sbjct: 198 KPSELASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGP 254

>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
Query: 11  KYQPISEDPKSTLNS-----LRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWK 64
           ++ P   +P+ TL       + YR L G + A+ P+NF          P L+ G+S L K
Sbjct: 102 EHGPAXLNPEPTLVENQQAVIEYRPL-GVILAIXPWNFPLWQVLRGAVPILLAGNSYLLK 160
Query: 65  PSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119
            +         I +I+ EAG P GV  +V A+       I   P +A +  TGSV
Sbjct: 161 HAPNVTGCAQXIARILAEAGTPAGVYGWVNANNEGVSQXIN-DPRIAAVTVTGSV 214

>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 21  STLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI 79
           + + +  YR   G V  ++PFNF  +     +  A+ +G++ + KPS+   L    + ++
Sbjct: 131 TDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVEL 190
Query: 80  MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
             +AG+P GV N V     V  + I   P +  I+F GS P
Sbjct: 191 FEKAGLPKGVFNVVYGAHDVV-NGILEHPEIKAISFVGSKP 230

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	120
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	2e-56
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	5e-33
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	5e-25
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	2e-22
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	2e-22
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	4e-18
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	4e-18
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	4e-18
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	1e-17
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	7e-16
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	1e-15
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	2e-15
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	4e-15
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	4e-15
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	3e-14
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	3e-14
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	1e-13
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	2e-13
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	3e-13
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	3e-13
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	5e-13
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	5e-13
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	5e-13
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	7e-13
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	7e-13
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	1e-12
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	2e-12
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	3e-12
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	3e-12
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	4e-12
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	4e-12
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	5e-12
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	1e-11
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	1e-11
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	2e-11
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	3e-11
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	5e-11
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	2e-10
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	2e-10
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	6e-10
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	1e-09
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	2e-09
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	3e-09
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	4e-09

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score =  182 bits (465), Expect = 2e-56
 Identities = 80/119 (67%), Positives = 96/119 (80%), Gaps = 2/119 (1%)

Query: 2   NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSV 61
           NA FA EL   QPIS  P +  N   YRGL+GFVAA+SPFNFTAIGGNLA  PALMG+ V
Sbjct: 173 NAKFAVELEGEQPISVPPST--NHTVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNVV 230

Query: 62  LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           LWKPSDTA+L++Y +Y+I+ EAG+PP ++ FVPADGP FGDT+T+S +L GINFTGSVP
Sbjct: 231 LWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVP 289

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score =  119 bits (300), Expect = 5e-33
 Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 3/118 (2%)

Query: 2   NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFT-AIGGNLAYTPALMGSS 60
            A    EL + + I   P    N   Y  + G    +SP+NF  AI    A  P + G++
Sbjct: 145 YARQMIELNRGKEILSRP-GEQNRYFYTPM-GVTVTISPWNFALAIMVGTAVAPIVTGNT 202

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           V+ KP+ T  +      +++ +AG+P GV+N+VP  G   GD +   P  + I FTGS
Sbjct: 203 VVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGS 260

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score = 97.4 bits (243), Expect = 5e-25
 Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 7/116 (6%)

Query: 6   AKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNF-TAI-GGNLAYTPALM-GSSVL 62
              L + Q +   P   LN   Y    G  A ++P+NF  AI  G  +   A++ G+ V+
Sbjct: 643 MIRLGQPQRVGHAP-GELNHYFYEPK-GVAAVIAPWNFPLAISMGMAS--AAIVTGNCVV 698

Query: 63  WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           +KPS    +  + + ++  EAG+P GV NF P  G V GD +   P ++ I FTGS
Sbjct: 699 FKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGS 754

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score = 89.9 bits (224), Expect = 2e-22
 Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 4   FFAKELTKYQ---PISEDPKSTLNSLRYRGLDGFVAAVSPFNF-TAI-GGNLAYTPALM- 57
           ++A+   +Y+             N   Y  L G    ++P+NF  AI  G +     +  
Sbjct: 144 YYARAALRYRYPAVEVVPYPGEDNESFYVPL-GAGVVIAPWNFPVAIFTGMIV--GPVAV 200

Query: 58  GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTG 117
           G++V+ KP++ A++    +++I  EAG PPGVVNF+P  G   G  +   P +  INFTG
Sbjct: 201 GNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTG 260

Query: 118 SV 119
           S+
Sbjct: 261 SL 262

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score = 89.8 bits (223), Expect = 2e-22
 Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 3/117 (2%)

Query: 3   AFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNF-TAIGGNLAYTPALMGSSV 61
           A   ++L   +     P    N+L  RG  G   A+SP+NF  AI         + G+SV
Sbjct: 622 AAQGRKLFGSETAMPGPTGESNALTMRGR-GVFVAISPWNFPLAIFLGQVTAALMAGNSV 680

Query: 62  LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           + KP++           ++ EAG+P   +  V  DG + G  +TA P +AG+ FTGS
Sbjct: 681 VAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGS 736

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score = 77.6 bits (192), Expect = 4e-18
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 2/88 (2%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPS-DTALLSNYTIYKIMIEAGVPPGVV 90
           G V  +SP+NF       +  PAL +G++V+ KP+ DT +       +I  EAGVP GV+
Sbjct: 150 GVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVI 209

Query: 91  NFVPADGPVFGDTITASPYLAGINFTGS 118
           + V   G   GD          I+FTGS
Sbjct: 210 STVAGAGSEIGDHFVTHAVPKLISFTGS 237

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score = 77.2 bits (191), Expect = 4e-18
 Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 5/91 (5%)

Query: 33  GFVAAVSPFNFTA--IGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 89
           G V A+SPFN+     G  +A  PAL+ G+ + +KP     +S   + +   EAG+P GV
Sbjct: 145 GLVLAISPFNYPVNLAGSKIA--PALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGV 202

Query: 90  VNFVPADGPVFGDTITASPYLAGINFTGSVP 120
            N +   G   GD I     +  INFTGS  
Sbjct: 203 FNTITGRGSEIGDYIVEHQAVNFINFTGSTG 233

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score = 77.2 bits (191), Expect = 4e-18
 Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 9/93 (9%)

Query: 33  GFVAAVSPFNFTAIGGNLAYT----PALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPP 87
           G V A+SPFN+     NLA      PAL+ G++V++KP+    LS   + + + +AG P 
Sbjct: 154 GVVLAISPFNYPV---NLA-AAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPE 209

Query: 88  GVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           G++  V   G V GD +   P +  I FTG   
Sbjct: 210 GIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTT 242

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score = 76.1 bits (188), Expect = 1e-17
 Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 2/88 (2%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPS-DTALLSNYTIYKIMIEAGVPPGVV 90
           G ++++SPFNF       +  PA+ +G+SV+ KP   TA+     I K    AG+P GV+
Sbjct: 145 GVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVL 204

Query: 91  NFVPADGPVFGDTITASPYLAGINFTGS 118
           N +  D    GD +  +P    I+FTGS
Sbjct: 205 NVMLTDVKEIGDGMLTNPIPRLISFTGS 232

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score = 71.1 bits (175), Expect = 7e-16
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 8/92 (8%)

Query: 33  GFVAAVSPFNFTAIGGNLA---YTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 88
           G VAA++PFN+       A    T + + G++V+ KPS +  L      K +++AG PP 
Sbjct: 159 GVVAAITPFNYPL---FDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215

Query: 89  VVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
            +  +   G    + I A   +A ++FTGS  
Sbjct: 216 AIALLNLPGKE-AEKIVADDRVAAVSFTGSTE 246

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score = 70.3 bits (173), Expect = 1e-15
 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 6/91 (6%)

Query: 33  GFVAAVSPFNFTA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 89
           G VA   P+NF      G++   PAL  G+ V++KPS+          K  I+AG+P GV
Sbjct: 141 GVVAVFGPYNFPGHLPNGHIV--PALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGV 198

Query: 90  VNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           +N V       G  + A   L G+ FTGS  
Sbjct: 199 LNLVQGGRET-GVALAAHRGLDGLFFTGSSR 228

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score = 69.5 bits (171), Expect = 2e-15
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)

Query: 33  GFVAAVSPFNF--TAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 89
           G    ++P+NF        LA   A   GS V+ KPS+    +   + +I  + GVP GV
Sbjct: 141 GVSGLITPWNFPTNQTSLKLA--AAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGV 198

Query: 90  VNFVPADGPVFGDTITASPYLAGINFTGS 118
            N V  DG   G+ ++  P +  ++FTGS
Sbjct: 199 FNLVNGDGAGVGNPLSEHPKVRMMSFTGS 227

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score = 69.1 bits (170), Expect = 4e-15
 Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 17/99 (17%)

Query: 33  GFVAAVSPFNFTA------IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEA-- 83
           G V A++PFNF        I       PA+  G+ ++  PS  A L    + KI+  A  
Sbjct: 132 GIVGAITPFNFPLNLSAHKIA------PAIATGNVIVHHPSSKAPLVCIELAKIIENALK 185

Query: 84  --GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
              VP GV N +   G V GD I  +  +  I+FTGS  
Sbjct: 186 KYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSK 224

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score = 68.7 bits (169), Expect = 4e-15
 Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 5/118 (4%)

Query: 4   FFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNF--TAIGGNLAYTPAL-MGSS 60
            F K   ++       +    ++ +    G V  ++P+N+    +   +   PAL  G +
Sbjct: 134 NFIKAYKEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVI--PALLAGCT 191

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           ++ KPS+ A LS     +I+ EA +P GV N +  DG   G  ++A P L  I+FTGS
Sbjct: 192 MVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGS 249

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score = 66.4 bits (163), Expect = 3e-14
 Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 33  GFVAAVSPFNFTA--IGGNLAYTPALM-GSSVLWKPSD----TALLSNYTIYKIMIEAGV 85
           G V  ++ FNF     G N A   A++ G+  LWK +      ++     I K++ +  +
Sbjct: 159 GLVGIITAFNFPVAVYGWNNA--IAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKL 216

Query: 86  PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           P  + +       + G  +     +  ++FTGS  
Sbjct: 217 PGAICSLTCGGADI-GTAMAKDERVNLLSFTGSTQ 250

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score = 66.4 bits (163), Expect = 3e-14
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 5/91 (5%)

Query: 33  GFVAAVSPFNFTA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 89
           G    + P+NF    I   +A  PAL  G++++ KPS+    +     KI+ E G+P GV
Sbjct: 144 GVTTGILPWNFPFFLIARKMA--PALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGV 201

Query: 90  VNFVPADGPVFGDTITASPYLAGINFTGSVP 120
            N V   G   G  +  +P +A ++ TGSV 
Sbjct: 202 FNLVLGRGETVGQELAGNPKVAMVSMTGSVS 232

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score = 64.5 bits (158), Expect = 1e-13
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 33  GFVAAVSPFNFTA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 89
           G V  ++ +NF     G  +   PAL  G++++ KP+    L+   + +I  EAG+P GV
Sbjct: 150 GVVVGITAWNFPLALAGRKIG--PALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGV 207

Query: 90  VNFVPADGPVFGDTITASPYLAGINFTGS 118
           +N +   G V G T+  SP    I  TGS
Sbjct: 208 LNVINGTGSVVGQTLCESPITKMITMTGS 236

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score = 64.1 bits (157), Expect = 2e-13
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 33  GFVAAVSPFNFTA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 89
           G    + P+NF    I   L+   AL  G   + KP+    L+    + +M +  +P G+
Sbjct: 149 GVTGLIVPWNFPIGMIAKKLS--AALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGM 206

Query: 90  VNFVPADGPVFGDTITASPYLAGINFTGS 118
           VN V     V G  +     +  ++FTGS
Sbjct: 207 VNLVMGKASVIGKVLCEHKDVPMLSFTGS 235

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score = 63.5 bits (155), Expect = 3e-13
 Identities = 27/136 (19%), Positives = 46/136 (33%), Gaps = 22/136 (16%)

Query: 4   FFAKELTKY----------QPISEDPKSTLNSLRYRGLDGFVAAVSPFNF----TAIGGN 49
            FA  +              P            +   L G VA     NF    +A GG+
Sbjct: 100 LFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIAL-GPVAVFGASNFPLAFSAAGGD 158

Query: 50  LAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEA----GVPPGVVNFVPADGPVFGDTI 104
            A   AL  G  V+ K       ++  + + + +A     +P  +   +  +    G  +
Sbjct: 159 TA--SALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQAL 216

Query: 105 TASPYLAGINFTGSVP 120
            + P +  + FTGSV 
Sbjct: 217 VSHPEIKAVGFTGSVG 232

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score = 63.4 bits (155), Expect = 3e-13
 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 33  GFVAAVSPFNFTA------IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGV 85
           G  AA++P+NF A              PAL  G +++ +P+D   L+   +  +  +AG+
Sbjct: 170 GVTAAITPWNFPAAMITRKAA------PALAAGCTMIVRPADLTPLTALALGVLAEKAGI 223

Query: 86  PPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           P GV+  V       G  +T++  +  ++FTGS
Sbjct: 224 PAGVLQIVTGKAREIGAELTSNDTVRKLSFTGS 256

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score = 62.9 bits (154), Expect = 5e-13
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 13/93 (13%)

Query: 33  GFVAAVSPFNFTA------IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGV 85
           G  AA++P+NF A       G      PAL  G +++ KP+     S   + ++ I AGV
Sbjct: 147 GVTAAITPWNFPAAMITRKAG------PALAAGCTMVLKPASQTPFSALALAELAIRAGV 200

Query: 86  PPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           P GV N V       G+ +T++P +  ++FTGS
Sbjct: 201 PAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGS 233

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score = 62.9 bits (154), Expect = 5e-13
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 5/89 (5%)

Query: 33  GFVAAVSPFNFTA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 89
           G  AA++P+NF A  I   +   PAL  G  ++ KP+++   S   +  +   AGVP GV
Sbjct: 150 GVCAAITPWNFPAAMIARKVG--PALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGV 207

Query: 90  VNFVPADGPVFGDTITASPYLAGINFTGS 118
           ++ V  D    G  IT++P +  ++FTGS
Sbjct: 208 LSVVIGDPKAIGTEITSNPIVRKLSFTGS 236

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score = 63.0 bits (154), Expect = 5e-13
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 13/93 (13%)

Query: 33  GFVAAVSPFNF----TA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGV 85
           G V  ++P+NF     +  +        A+  G +V+ KPS+    ++  + ++  EAG+
Sbjct: 163 GVVGIITPWNFPFIIASERVP------WAIGSGCTVVLKPSEFTSGTSIRLAELAREAGI 216

Query: 86  PPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           P GV N V   G   G  +   P +  + FTGS
Sbjct: 217 PDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGS 249

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score = 62.5 bits (153), Expect = 7e-13
 Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 6/118 (5%)

Query: 4   FFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNF--TAIGGNLAYTPAL-MGSS 60
           +FA    K         S   S+  R   G V A+  +N         +A  PAL  G +
Sbjct: 119 YFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIA--PALLAGCT 176

Query: 61  VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           ++ KP+    L+   + ++  E G+P GV++ VP  G   G  +T++P +    FTGS
Sbjct: 177 IVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGS 233

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score = 61.8 bits (151), Expect = 1e-12
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 13/93 (13%)

Query: 33  GFVAAVSPFNF----TA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGV 85
           G    V P+N+     +            L  G++V+ KP+    L+     ++ ++AG+
Sbjct: 180 GVCGIVIPWNYPLMMLSWKTA------ACLAAGNTVVIKPAQVTPLTALKFAELTLKAGI 233

Query: 86  PPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           P GVVN +P  G + G  ++  P +  I FTGS
Sbjct: 234 PKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGS 266

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score = 61.0 bits (149), Expect = 2e-12
 Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 13/93 (13%)

Query: 33  GFVAAVSPFNF----TA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGV 85
           G    + P+NF     A  +G      PAL  G+ V+ K ++   L+   +  ++ EAG 
Sbjct: 160 GVCGQIIPWNFPLLMQAWKLG------PALATGNVVVMKVAEQTPLTALYVANLIKEAGF 213

Query: 86  PPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           PPGVVN VP  GP  G  I +   +  + FTGS
Sbjct: 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGS 246

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score = 61.0 bits (149), Expect = 3e-12
 Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 13/93 (13%)

Query: 33  GFVAAVSPFNF----TA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGV 85
           G    + P+NF        IG      PAL  G++V+ KP++   L+   +  ++ EAG 
Sbjct: 161 GVCGQIIPWNFPLLMFLWKIG------PALSCGNTVVVKPAEQTPLTALHMGSLIKEAGF 214

Query: 86  PPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           PPGVVN VP  GP  G  I++   +  + FTGS
Sbjct: 215 PPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGS 247

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score = 60.5 bits (147), Expect = 3e-12
 Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 11/97 (11%)

Query: 33  GFVAAVSPFNF----TAIGGNLAYTPAL-MGSSVLWKPSD----TALLSNYTIYKIMIEA 83
           G VA     NF    +  GG+ A   AL  G  V+ K       T  +    +   + + 
Sbjct: 171 GPVAVFGASNFPLAFSTAGGDTA--AALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKT 228

Query: 84  GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           GV PGV + +       G  +   P++  + FTGS+ 
Sbjct: 229 GVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLA 265

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score = 60.6 bits (148), Expect = 4e-12
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 54  PAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 112
           PAL  G + + KPS+ A L+   + +I  E G+PPGV+N +   GP  G  +   P +  
Sbjct: 174 PALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDK 233

Query: 113 INFTGSVP 120
           + FTGS  
Sbjct: 234 VAFTGSSA 241

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score = 60.3 bits (147), Expect = 4e-12
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 13/93 (13%)

Query: 33  GFVAAVSPFNF----TA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGV 85
           G V  ++P+N     +   I       PAL  G++V+ KP++ +  +   + +I+ EA +
Sbjct: 164 GPVGIITPWNAPLMLSTWRIA------PALAFGNTVVLKPAEWSPFTATKLAEILKEADL 217

Query: 86  PPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
           PPGV N V   G   G  + A P +  +  TG 
Sbjct: 218 PPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGE 250

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score = 60.3 bits (147), Expect = 5e-12
 Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 2/68 (2%)

Query: 54  PAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 112
           PAL  G+++++KPS+   L    I +I+IEAG+P G+ N +  D    G  +   P +A 
Sbjct: 173 PALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAK 231

Query: 113 INFTGSVP 120
           ++ TGSVP
Sbjct: 232 VSLTGSVP 239

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score = 59.3 bits (144), Expect = 1e-11
 Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 13/124 (10%)

Query: 3   AFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNF---TAIGGNLAYTPALM-G 58
             + K++     + ED +  +  +      G VA + P      T I        ++  G
Sbjct: 82  YNYIKDMKTIGMLKEDNEKKV--MEVAVPLGVVAGLIPSTNPTSTVIY-KTL--ISIKAG 136

Query: 59  SSVLWKPSDTALLSNYTIYKIMIE----AGVPPGVVNFVPADGPVFGDTITASPYLAGIN 114
           +S+++ P   AL +     +I+ E    AG P G ++ +        D +      A I 
Sbjct: 137 NSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVIL 196

Query: 115 FTGS 118
            TG 
Sbjct: 197 ATGG 200

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score = 58.7 bits (143), Expect = 1e-11
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 54  PAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 112
           PAL  G S++ KPS+   L+   ++++M E G P G +N +   G   GD ++    +  
Sbjct: 193 PALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDL 252

Query: 113 INFTGSVP 120
           ++FTG + 
Sbjct: 253 VSFTGGIE 260

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score = 58.5 bits (142), Expect = 2e-11
 Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 5/89 (5%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGV-PPGVV 90
           G    ++ FNF + G      PAL+ G  V+ KP+         +   +++AG+ PPG +
Sbjct: 153 GVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGAL 212

Query: 91  NFVPADGPVFGDTITASPYLAGINFTGSV 119
           + +          +        ++FTGS 
Sbjct: 213 SIICGSS---AGLLDQIRSFDVVSFTGSA 238

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score = 57.9 bits (141), Expect = 3e-11
 Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 8/92 (8%)

Query: 33  GFVAAVSPFNFTA--IGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 89
           G  A ++P+NF +  I   +    AL  G +V+ KP++    S   + ++  +AG+P GV
Sbjct: 148 GVAAVITPWNFPSAMITRKVG--AALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGV 205

Query: 90  VNFVPA---DGPVFGDTITASPYLAGINFTGS 118
            N +P    +    G+ I   P ++ I+FTGS
Sbjct: 206 YNVIPCSRKNAKEVGEAICTDPLVSKISFTGS 237

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score = 57.2 bits (139), Expect = 5e-11
 Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 2/68 (2%)

Query: 54  PAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 112
           PAL  G++V++KPS    ++   + +I  EAGVP G+VN V   G   G  +   P +A 
Sbjct: 178 PALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAK 236

Query: 113 INFTGSVP 120
           ++FTGSVP
Sbjct: 237 VSFTGSVP 244

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score = 55.6 bits (135), Expect = 2e-10
 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 22/99 (22%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-----------GSSVLWKPSDTALLSNYTIYKIMI 81
           G VA+++P+N+          P +M           G+ V+ KPS+   L+   + ++  
Sbjct: 161 GVVASIAPWNY----------PLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAK 210

Query: 82  EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           +   P GVVN +   G   GD +T  P +  ++ TGS+ 
Sbjct: 211 DI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIA 248

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score = 55.6 bits (135), Expect = 2e-10
 Identities = 23/94 (24%), Positives = 49/94 (52%), Gaps = 14/94 (14%)

Query: 33  GFVAAVSPFNF----TA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGV 85
           G V +++P+N+     A  +       PA+  G++V++KPS+   L+   + +++ +  +
Sbjct: 163 GIVGSIAPWNYPLMMMAWKLA------PAIGGGNTVVFKPSEQTPLTALKLARLIADI-L 215

Query: 86  PPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119
           P GVVN +   G   G+ +   P +  ++ TG +
Sbjct: 216 PEGVVNVITGRGETVGNALINHPKVGMVSITGDI 249

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score = 54.2 bits (131), Expect = 6e-10
 Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 13/112 (11%)

Query: 15  ISEDPKSTLNSLRYRGLDGFVAAVSPFNF---TAIGGNLAYTPALM-GSSVLWKPSDTAL 70
           + ED       +      G +  + P      TAI        +L   + +++ P   A 
Sbjct: 89  LEEDDNLGT--MTIAEPVGIICGIVPTTNPTSTAIF-KSL--ISLKTRNGIIFSPHPRAK 143

Query: 71  LSNYTIYKIMIEA----GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGS 118
            S     K++++A    G P  ++ ++        + +     +A I  TG 
Sbjct: 144 NSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGG 195

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score = 53.3 bits (129), Expect = 1e-09
 Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 15/121 (12%)

Query: 6   AKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNF-----TAIGGNLAYTPALM-GS 59
             E+ K   ++ D  +       +   G + A  P+NF       +       P  + G+
Sbjct: 101 GPEMLKPTKLNSDLGNAY--YLKQST-GVIMACEPWNFPLYQVIRVFA-----PNFIVGN 152

Query: 60  SVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV 119
            +L K +     S     KI+  AG P G +  +        D I A P + G+  TGS 
Sbjct: 153 PILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSE 211

Query: 120 P 120
            
Sbjct: 212 R 212

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score = 52.6 bits (127), Expect = 2e-09
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G V  ++PFNF  +     +  A+  G++ + KPS+   L    + ++  +AG+P GV N
Sbjct: 143 GVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFN 202

Query: 92  FVPADGPVFGDTITASPYLAGINFTGSVP 120
            V     V  + I   P +  I+F GS P
Sbjct: 203 VVYGAHDVV-NGILEHPEIKAISFVGSKP 230

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score = 51.8 bits (125), Expect = 3e-09
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 12/94 (12%)

Query: 33  GFVAAVSPFNF-----TAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVP 86
           G + A+ P+NF               P L+ G+S L K +         I +I+ EAG P
Sbjct: 128 GVILAIMPWNFPLWQVLRGAV-----PILLAGNSYLLKHAPNVTGCAQMIARILAEAGTP 182

Query: 87  PGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
            GV  +V A+       +   P +A +  TGSV 
Sbjct: 183 AGVYGWVNANNEGVSQ-MINDPRIAAVTVTGSVR 215

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score = 51.9 bits (125), Expect = 4e-09
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 2/89 (2%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 91
           G  A ++PFNF  +     + PA+  G++ + KPS+        + ++MIEAG+P G++N
Sbjct: 164 GIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILN 223

Query: 92  FVPADGPVFGDTITASPYLAGINFTGSVP 120
            V  D     D I   P +A ++F GS P
Sbjct: 224 VVNGDKGAV-DAILTHPDIAAVSFVGSTP 251

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	120
2wme_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	99.97
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	99.97
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	99.97
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	99.97
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	99.97
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	99.97
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	99.97
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	99.97
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	99.97
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	99.97
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	99.97
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	99.97
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	99.97
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	99.96
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	99.96
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	99.96
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	99.96
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	99.96
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	99.96
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	99.96
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	99.96
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	99.96
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	99.96
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	99.96
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	99.96
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	99.96
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	99.96
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	99.96
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	99.96
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	99.96
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	99.96
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	99.96
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	99.96
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	99.96
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	99.96
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	99.96
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	99.96
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	99.95
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	99.95
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	99.95
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	99.95
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	99.95
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	99.95
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	99.94
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	99.94
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	99.93
4ghk_A	444	Gamma-glutamyl phosphate reductase; structural gen	99.93
4h7n_A	474	Aldehyde dehydrogenase; structural genomics, PSI-b	99.93
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	99.93
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	99.93
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	99.93
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	99.92

>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*

Probab=99.97  E-value=1.1e-32  Score=218.71  Aligned_cols=119  Identities=27%  Similarity=0.424  Sum_probs=108.9

Q ss_pred             ChHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           1 LNAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         1 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      +++||++.+++..+...+..+....+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..++++
T Consensus       112 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l  191 (490)
T 2wme_A          112 VLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEI  191 (490)
T ss_dssp             HHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHH
T ss_pred             HHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHH
Confidence            36899999988765332234567789999999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|++++++.++++.|.+||+||+|.||||+
T Consensus       192 ~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~  231 (490)
T 2wme_A          192 YTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGT  231 (490)
T ss_dssp             HHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCH
T ss_pred             HHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECCh
Confidence            9999999999999999888999999999999999999996

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*

Probab=99.97  E-value=5.8e-31  Score=210.07  Aligned_cols=118  Identities=26%  Similarity=0.468  Sum_probs=106.6

Q ss_pred             hHHHHHHhhhcCCCCCC-CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISED-PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++.+++..+.... ..++...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..++++
T Consensus       140 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l  219 (520)
T 3ed6_A          140 FMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFEL  219 (520)
T ss_dssp             HHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHH
Confidence            68899998886542221 22466789999999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|++++++.+.++.|++||+||+|.||||+
T Consensus       220 ~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~  259 (520)
T 3ed6_A          220 MEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGI  259 (520)
T ss_dssp             HHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCH
T ss_pred             HHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCH
Confidence            9999999999999999878899999999999999999995

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...

Probab=99.97  E-value=7.6e-31  Score=208.56  Aligned_cols=118  Identities=29%  Similarity=0.446  Sum_probs=105.6

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+++..+-.....++...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+++++
T Consensus       129 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~  208 (500)
T 1o04_A          129 LRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLI  208 (500)
T ss_dssp             HHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHH
Confidence            6789988887644221123455678999999999999999999999999999999 799999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|++|++++++.+.++.|++|++||+|.||||+
T Consensus       209 ~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~  247 (500)
T 1o04_A          209 KEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGST  247 (500)
T ss_dssp             HHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCH
T ss_pred             HHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCH
Confidence            999999999999999777899999999999999999996

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*

Probab=99.97  E-value=9.3e-31  Score=208.10  Aligned_cols=118  Identities=29%  Similarity=0.411  Sum_probs=105.9

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+++..+-.....++...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+++++
T Consensus       130 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~  209 (501)
T 1bxs_A          130 LRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLI  209 (501)
T ss_dssp             HHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHH
Confidence            6789998887644221223455678999999999999999999999999999999 799999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|++|++++++.+.++.|.+|+++|+|.||||+
T Consensus       210 ~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~  248 (501)
T 1bxs_A          210 KEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGST  248 (501)
T ss_dssp             HHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCH
T ss_pred             HHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCH
Confidence            999999999999999777889999999999999999995

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*

Probab=99.97  E-value=9.6e-31  Score=208.70  Aligned_cols=118  Identities=26%  Similarity=0.427  Sum_probs=104.9

Q ss_pred             hHHHHHHhhhcCCCCCCC----CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDP----KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI   76 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~----~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~   76 (120)
                      ++||++++++..+...+.    .+....+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+
T Consensus       145 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l  224 (517)
T 2o2p_A          145 FRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKF  224 (517)
T ss_dssp             HHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHH
T ss_pred             HHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHH
Confidence            689999888764422111    2333678999999999999999999999999999999 79999999999999999999


Q ss_pred             HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++++++|+|+|++|++++++.+.++.|++|++||+|.||||+
T Consensus       225 ~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~  267 (517)
T 2o2p_A          225 AELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGST  267 (517)
T ss_dssp             HHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCH
T ss_pred             HHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCH
Confidence            9999999999999999999777889999999999999999996

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}

Probab=99.97  E-value=9.4e-31  Score=208.23  Aligned_cols=118  Identities=26%  Similarity=0.416  Sum_probs=106.5

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++..++..+.. +...++...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..++++
T Consensus       138 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l  217 (504)
T 3ek1_A          138 IEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVL  217 (504)
T ss_dssp             HHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHH
Confidence            688998888765422 2223457789999999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|++++++.+.++.|.+||+||.|.||||+
T Consensus       218 ~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~  257 (504)
T 3ek1_A          218 AEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGST  257 (504)
T ss_dssp             HHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCH
T ss_pred             HHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCH
Confidence            9999999999999999778899999999999999999996

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*

Probab=99.97  E-value=2.6e-30  Score=206.10  Aligned_cols=118  Identities=29%  Similarity=0.484  Sum_probs=105.8

Q ss_pred             hHHHHHHhhhcCCCC-C-CCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-E-DPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYK   78 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~   78 (120)
                      ++||++.+++..+.. . ...++...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+++
T Consensus       142 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~  221 (516)
T 1uzb_A          142 IEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFE  221 (516)
T ss_dssp             HHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHH
Confidence            678999888775422 1 223445678999999999999999999999999999999 6999999999999999999999


Q ss_pred             HHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          79 IMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        79 ~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++++|+|+|++|++++++.+.++.|++|++||+|+||||+
T Consensus       222 l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~  262 (516)
T 1uzb_A          222 IFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSL  262 (516)
T ss_dssp             HHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCH
T ss_pred             HHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCH
Confidence            99999999999999999777889999999999999999995

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q

Probab=99.97  E-value=7.4e-31  Score=207.91  Aligned_cols=118  Identities=29%  Similarity=0.437  Sum_probs=106.4

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++..++..+.. +...++...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..++++
T Consensus       118 l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l  197 (484)
T 3ifg_A          118 IEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFL  197 (484)
T ss_dssp             HHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHH
T ss_pred             HHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHH
Confidence            678998888765422 2123567789999999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|++++++.+.++.|++||+||+|.||||+
T Consensus       198 ~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~  237 (484)
T 3ifg_A          198 AERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGST  237 (484)
T ss_dssp             HHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCH
T ss_pred             HHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCH
Confidence            9999999999999999777899999999999999999996

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}

Probab=99.97  E-value=1.3e-30  Score=208.41  Aligned_cols=118  Identities=26%  Similarity=0.366  Sum_probs=106.6

Q ss_pred             hHHHHHHhhhcCCCCCC-CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISED-PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++.+++..+.... ...+...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..++++
T Consensus       131 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l  210 (528)
T 3u4j_A          131 WSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAEL  210 (528)
T ss_dssp             HHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHH
Confidence            67899998887542221 12466789999999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.++|+|+|++|++++++.+.++.|++||+||+|.||||+
T Consensus       211 ~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~  250 (528)
T 3u4j_A          211 AREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSV  250 (528)
T ss_dssp             HHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCH
T ss_pred             HHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCH
Confidence            9999999999999999777899999999999999999985

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A

Probab=99.97  E-value=2.2e-30  Score=207.41  Aligned_cols=118  Identities=24%  Similarity=0.400  Sum_probs=105.7

Q ss_pred             hHHHHHH-hhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKE-LTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~-~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++. .++..+.......+...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..++++
T Consensus       142 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l  221 (538)
T 3qan_A          142 LEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEV  221 (538)
T ss_dssp             HHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHH
Confidence            6788888 455554332223467789999999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|++++++.+.++.|++|++||+|.||||+
T Consensus       222 ~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~  261 (538)
T 3qan_A          222 LEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSK  261 (538)
T ss_dssp             HHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCH
T ss_pred             HHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCH
Confidence            9999999999999999878899999999999999999995

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}

Probab=99.97  E-value=1.9e-30  Score=206.90  Aligned_cols=118  Identities=25%  Similarity=0.363  Sum_probs=105.5

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++++++..+.. +...++...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..++++
T Consensus       132 l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l  211 (515)
T 2d4e_A          132 FAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEI  211 (515)
T ss_dssp             HHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHH
Confidence            678898888765422 1113455678999999999999999999999999999999 79999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|++++++.+.++.|.+|+++|+|.||||+
T Consensus       212 ~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~  251 (515)
T 2d4e_A          212 LKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGET  251 (515)
T ss_dssp             HHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCH
T ss_pred             HHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcH
Confidence            9999999999999999777889999999999999999996

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}

Probab=99.97  E-value=2.8e-30  Score=204.64  Aligned_cols=117  Identities=22%  Similarity=0.307  Sum_probs=104.7

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+++..+.......+...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+++++
T Consensus        94 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~  173 (484)
T 3ros_A           94 CNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKII  173 (484)
T ss_dssp             HHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH
Confidence            5788988887654321123456789999999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|++|++++++.+.++ |++|++||+|.||||+
T Consensus       174 ~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~  211 (484)
T 3ros_A          174 KRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSE  211 (484)
T ss_dssp             HHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCH
T ss_pred             HHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCH
Confidence            9999999999999997777778 9999999999999996

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}

Probab=99.97  E-value=1.3e-30  Score=207.46  Aligned_cols=118  Identities=21%  Similarity=0.314  Sum_probs=106.7

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEe-ccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYR-GLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++.+++..+...+...+...++++ +|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..++++
T Consensus       117 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l  196 (506)
T 3rh9_A          117 FDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSV  196 (506)
T ss_dssp             HHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHH
Confidence            6889999988755332223556788889 999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.++|+|+|++|++++++.+.++.|++||+||+|.||||+
T Consensus       197 ~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~  236 (506)
T 3rh9_A          197 MDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGST  236 (506)
T ss_dssp             HTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCH
T ss_pred             HHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCH
Confidence            9999999999999999777899999999999999999996

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*

Probab=99.96  E-value=1.8e-30  Score=206.49  Aligned_cols=117  Identities=26%  Similarity=0.384  Sum_probs=104.2

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+++..+......++...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+++++
T Consensus       126 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~  205 (503)
T 1a4s_A          126 IEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIF  205 (503)
T ss_dssp             HHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH
Confidence            6889998887644211112344678999999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|++|++++++ +.++.|.+|+++|+|.||||+
T Consensus       206 ~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~  243 (503)
T 1a4s_A          206 HEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSV  243 (503)
T ss_dssp             HHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCH
T ss_pred             HHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCH
Confidence            99999999999999976 889999999999999999996

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}

Probab=99.96  E-value=2.8e-30  Score=205.15  Aligned_cols=118  Identities=25%  Similarity=0.356  Sum_probs=106.4

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++.+++..+.. +....+...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..++++
T Consensus       118 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l  197 (497)
T 3k2w_A          118 IDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRI  197 (497)
T ss_dssp             HHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHH
Confidence            578888888765422 2123566789999999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.++|+|+|++|++++++.+.++.|++||++|+|.||||+
T Consensus       198 l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~  237 (497)
T 3k2w_A          198 AKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGST  237 (497)
T ss_dssp             HHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCH
T ss_pred             HHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcH
Confidence            9999999999999999877899999999999999999996

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A

Probab=99.96  E-value=4.8e-30  Score=206.41  Aligned_cols=119  Identities=60%  Similarity=0.988  Sum_probs=106.8

Q ss_pred             ChHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhccccCCCeEEeecCCCcHHHHHHHHHH
Q psy1844           1 LNAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         1 ~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~alaGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      |++||++.+++..+.. ...++....+++++|+|||++|+|||||+....+++++||+||+||+|||+.+|+++..++++
T Consensus       169 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apALaGNtVVlKPs~~tp~sa~~l~~l  248 (563)
T 4e3x_A          169 FFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRI  248 (563)
T ss_dssp             HHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHHHHHHHhhcCCEEEEECCCCChHHHHHHHHH
Confidence            4688999888775422 222345667888999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|++++++.+.++.|.+|++|++|.||||+
T Consensus       249 l~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt  288 (563)
T 4e3x_A          249 LREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSV  288 (563)
T ss_dssp             HHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCH
T ss_pred             HHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCH
Confidence            9999999999999999878889999999999999999996

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}

Probab=99.96  E-value=5.5e-30  Score=202.65  Aligned_cols=118  Identities=28%  Similarity=0.446  Sum_probs=106.1

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++...+..+.. +...++...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.++
T Consensus       115 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l  194 (481)
T 3jz4_A          115 IEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAEL  194 (481)
T ss_dssp             HHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHH
Confidence            578888877764422 2223566789999999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|++++++.+.++.|.+|++||+|.||||+
T Consensus       195 ~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~  234 (481)
T 3jz4_A          195 AIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGST  234 (481)
T ss_dssp             HHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCH
T ss_pred             HHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCH
Confidence            9999999999999999888899999999999999999995

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*

Probab=99.96  E-value=3e-30  Score=205.32  Aligned_cols=118  Identities=30%  Similarity=0.454  Sum_probs=104.7

Q ss_pred             hHHHHHHhhhcCCCC--CCCCC----CcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHH
Q psy1844           2 NAFFAKELTKYQPIS--EDPKS----TLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNY   74 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~--~~~~~----~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~   74 (120)
                      ++||++.+++..+..  ....+    +...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++.
T Consensus       117 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~  196 (505)
T 3prl_A          117 IRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGI  196 (505)
T ss_dssp             HHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHH
T ss_pred             HHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHH
Confidence            578898888764421  11101    45678999999999999999999999999999999 699999999999999999


Q ss_pred             HHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          75 TIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        75 ~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .+.+++.++|+|+|++|++++++.+.++.|++||++|+|.||||+
T Consensus       197 ~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~  241 (505)
T 3prl_A          197 KMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGT  241 (505)
T ss_dssp             HHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCH
T ss_pred             HHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCH
Confidence            999999999999999999999777899999999999999999996

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}

Probab=99.96  E-value=2.9e-30  Score=205.00  Aligned_cols=117  Identities=27%  Similarity=0.405  Sum_probs=104.0

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+++..+...+...+...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+++++
T Consensus       117 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~  196 (495)
T 3b4w_A          117 MNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVF  196 (495)
T ss_dssp             HHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHH
Confidence            5788888877644221112344678999999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|++|++++ +.+.++.|++|+++|+|+||||+
T Consensus       197 ~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~  234 (495)
T 3b4w_A          197 AEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSS  234 (495)
T ss_dssp             HHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCH
T ss_pred             HHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCH
Confidence            999999999999999 78899999999999999999995

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*

Probab=99.96  E-value=6.5e-30  Score=202.15  Aligned_cols=118  Identities=27%  Similarity=0.426  Sum_probs=104.5

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++.+++..+.. ....++...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..++++
T Consensus       112 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l  191 (479)
T 2imp_A          112 IDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKI  191 (479)
T ss_dssp             HHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHH
Confidence            578888877654322 1112345679999999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|++++++.+.++.|.+|+++|+|+||||+
T Consensus       192 ~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~  231 (479)
T 2imp_A          192 VDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSV  231 (479)
T ss_dssp             HHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCH
T ss_pred             HHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCH
Confidence            9999999999999999777789999999999999999995

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}

Probab=99.96  E-value=5.2e-30  Score=204.47  Aligned_cols=116  Identities=24%  Similarity=0.328  Sum_probs=104.2

Q ss_pred             hHHHHHHhhh----cCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844           2 NAFFAKELTK----YQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI   76 (120)
Q Consensus         2 ~~~~a~~~~~----~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~   76 (120)
                      ++||++.+++    ..+......++. .+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+
T Consensus       118 ~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l  196 (517)
T 3r31_A          118 ADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKI  196 (517)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHH
T ss_pred             HHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHH
Confidence            6788988887    544322123445 89999999999999999999999999999999 69999999999999999999


Q ss_pred             HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++.++|+|+|++|++++ +.+.++.|++||+||+|.||||+
T Consensus       197 ~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~  238 (517)
T 3r31_A          197 AEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSV  238 (517)
T ss_dssp             HHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCH
T ss_pred             HHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCH
Confidence            9999999999999999999 67899999999999999999985

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*

Probab=99.96  E-value=4.3e-30  Score=203.65  Aligned_cols=118  Identities=26%  Similarity=0.458  Sum_probs=105.0

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++++++..+.. ....++...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..++++
T Consensus       116 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l  195 (487)
T 2w8n_A          116 LEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAEL  195 (487)
T ss_dssp             HHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHH
Confidence            578999888865432 1113455778999999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEe---CCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVP---ADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~---~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|+++   +++.+.++.|.+|+++|+|+||||+
T Consensus       196 ~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~  238 (487)
T 2w8n_A          196 ASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGST  238 (487)
T ss_dssp             HHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECH
T ss_pred             HHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCH
Confidence            999999999999999   7666789999999999999999995

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*

Probab=99.96  E-value=6.1e-30  Score=203.41  Aligned_cols=118  Identities=30%  Similarity=0.491  Sum_probs=104.7

Q ss_pred             hHHHHHHhhhcCC-C--CC-CCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844           2 NAFFAKELTKYQP-I--SE-DPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI   76 (120)
Q Consensus         2 ~~~~a~~~~~~~~-~--~~-~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~   76 (120)
                      ++||++.+++..+ .  .. .+......+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+
T Consensus       118 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l  197 (503)
T 3iwj_A          118 FEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLEL  197 (503)
T ss_dssp             HHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHH
T ss_pred             HHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHH
Confidence            5788888876532 1  11 122456789999999999999999999999999999999 69999999999999999999


Q ss_pred             HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++++++|+|+|++|++++++.+.++.|..|+++|+|.||||+
T Consensus       198 ~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~  240 (503)
T 3iwj_A          198 GEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSS  240 (503)
T ss_dssp             HHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCH
T ss_pred             HHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcH
Confidence            9999999999999999999877889999999999999999996

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}

Probab=99.96  E-value=8.6e-30  Score=202.39  Aligned_cols=117  Identities=30%  Similarity=0.415  Sum_probs=101.9

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEE-eccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRY-RGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++.+.+...... ...+...+++ ++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..++++
T Consensus       132 ~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l  210 (497)
T 3i44_A          132 IRNFIKAYKEFSFQEA-LIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEI  210 (497)
T ss_dssp             HHHHHHHHHHCCSEEE-SSTTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHH
T ss_pred             HHHHHHHhhccccccc-ccCCceeEEEeecCceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHH
Confidence            5677777766532111 1123445667 9999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|++++++.+.++.|++||+||.|.||||+
T Consensus       211 ~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~  250 (497)
T 3i44_A          211 LDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGST  250 (497)
T ss_dssp             HHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCH
T ss_pred             HHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcH
Confidence            9999999999999999888899999999999999999996

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*

Probab=99.96  E-value=1.3e-29  Score=200.29  Aligned_cols=118  Identities=30%  Similarity=0.407  Sum_probs=103.4

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCC----cce-EEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKST----LNS-LRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNY   74 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~----~~~-~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~   74 (120)
                      ++||++++++..+.. ....++    ... +++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++.
T Consensus       108 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~  187 (475)
T 1euh_A          108 INYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL  187 (475)
T ss_dssp             HHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHH
T ss_pred             HHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHH
Confidence            578888887754321 111123    356 8999999999999999999999999999999 699999999999999999


Q ss_pred             HHHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          75 TIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        75 ~~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .++++++++|+|+|++|++++++.+.++.|.+|+++|+|+||||+
T Consensus       188 ~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~  232 (475)
T 1euh_A          188 LLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGST  232 (475)
T ss_dssp             HHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCH
T ss_pred             HHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECch
Confidence            999999999999999999999767789999999999999999995

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*

Probab=99.96  E-value=6.4e-30  Score=203.17  Aligned_cols=117  Identities=23%  Similarity=0.466  Sum_probs=105.6

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++.+++..+.. +...++...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..++++
T Consensus       131 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l  210 (498)
T 4f3x_A          131 WRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARL  210 (498)
T ss_dssp             HHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHH
Confidence            678999888764422 1123567789999999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.++ +|+|++|++++++.+.++.|++||++|.|.||||+
T Consensus       211 ~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~  249 (498)
T 4f3x_A          211 IADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDI  249 (498)
T ss_dssp             HHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCH
T ss_pred             HHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCH
Confidence            9999 99999999999888899999999999999999986

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*

Probab=99.96  E-value=8e-30  Score=202.71  Aligned_cols=117  Identities=26%  Similarity=0.351  Sum_probs=102.6

Q ss_pred             hHHHHHHhhhcCCCC-CCC--CC--CcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDP--KS--TLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT   75 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~--~~--~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~   75 (120)
                      ++||++.+++..+.. ...  .+  ....+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..
T Consensus       123 l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~  202 (501)
T 1uxt_A          123 LRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAM  202 (501)
T ss_dssp             HHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHH
T ss_pred             HHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHH
Confidence            567788877764321 111  12  33678999999999999999999999999999999 6999999999999999999


Q ss_pred             HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++++++|+|+|++|++++++ +.++.|.+|+++|+|.||||+
T Consensus       203 l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~  245 (501)
T 1uxt_A          203 AVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGST  245 (501)
T ss_dssp             HHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCH
T ss_pred             HHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcH
Confidence            9999999999999999999976 889999999999999999995

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*

Probab=99.96  E-value=1.7e-29  Score=200.19  Aligned_cols=117  Identities=30%  Similarity=0.388  Sum_probs=105.5

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+++..+... +..+...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+++++
T Consensus       102 ~~~~a~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~  180 (486)
T 3pqa_A          102 FKLAAFYVKEHRDEVI-PSDDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKII  180 (486)
T ss_dssp             HHHHHHHHHHCCEEEE-CCTTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCcee-cCCCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHH
Confidence            5788888887643222 12366789999999999999999999999999999999 699999999999999999999999


Q ss_pred             HHh----CCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEA----GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~a----g~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .++    |+|+|++|++++++.+.++.|++|+++|+|.||||+
T Consensus       181 ~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~  223 (486)
T 3pqa_A          181 ENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSS  223 (486)
T ss_dssp             HHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCH
T ss_pred             HHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECCh
Confidence            999    999999999999877889999999999999999996

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}

Probab=99.96  E-value=1.5e-29  Score=201.98  Aligned_cols=117  Identities=27%  Similarity=0.424  Sum_probs=102.7

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++..++..+.. ....++...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..++++
T Consensus       132 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l  211 (521)
T 4e4g_A          132 CEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAEL  211 (521)
T ss_dssp             HHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHH
Confidence            578887776664422 1123455688999999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|+++++ .+.++.|++||+||+|.||||+
T Consensus       212 ~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~  250 (521)
T 4e4g_A          212 MIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGST  250 (521)
T ss_dssp             HHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCH
T ss_pred             HHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCH
Confidence            99999999999999994 5677999999999999999996

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A

Probab=99.96  E-value=2.9e-29  Score=197.59  Aligned_cols=117  Identities=24%  Similarity=0.266  Sum_probs=104.0

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+++..+......++...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus        97 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l  176 (462)
T 3etf_A           97 CDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARIL  176 (462)
T ss_dssp             HHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHH
T ss_pred             HHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHH
Confidence            5788888877644222223456789999999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .++|+|+|++|++++ +.+.++.|++|+++|.|.||||+
T Consensus       177 ~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~  214 (462)
T 3etf_A          177 AEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSV  214 (462)
T ss_dssp             HHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCH
T ss_pred             HHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCc
Confidence            999999999999998 46788999999999999999996

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}

Probab=99.96  E-value=4.5e-29  Score=197.53  Aligned_cols=118  Identities=29%  Similarity=0.354  Sum_probs=106.2

Q ss_pred             hHHHHHHhhhcCCCCCC--CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHH-HHHH
Q psy1844           2 NAFFAKELTKYQPISED--PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSN-YTIY   77 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~-~~~~   77 (120)
                      ++||++.+++..+....  ..++...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++ ..+.
T Consensus       112 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~  191 (485)
T 4dng_A          112 LDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIA  191 (485)
T ss_dssp             HHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHH
T ss_pred             HHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHH
Confidence            57889888876553221  13457789999999999999999999999999999999 69999999999999999 9999


Q ss_pred             HHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          78 KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        78 ~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++.++|+|+|++|++++++.+.++.|++||++|+|.||||+
T Consensus       192 ~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~  233 (485)
T 4dng_A          192 KAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGST  233 (485)
T ss_dssp             HHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECH
T ss_pred             HHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCc
Confidence            999999999999999999777789999999999999999995

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=99.96  E-value=4.2e-29  Score=211.29  Aligned_cols=119  Identities=27%  Similarity=0.485  Sum_probs=107.3

Q ss_pred             ChHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHH
Q psy1844           1 LNAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYK   78 (120)
Q Consensus         1 ~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~   78 (120)
                      |++||++.+++..... ....++...++.++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+++
T Consensus       635 ~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~e  714 (1026)
T 4f9i_A          635 FLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVE  714 (1026)
T ss_dssp             HHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHH
Confidence            5789999998875422 2223456678889999999999999999999999999999 6999999999999999999999


Q ss_pred             HHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          79 IMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        79 ~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++++|+|+|++|+++|++.+.++.|++||+|++|.||||+
T Consensus       715 ll~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt  755 (1026)
T 4f9i_A          715 LFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSM  755 (1026)
T ss_dssp             HHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCH
T ss_pred             HHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCH
Confidence            99999999999999999888899999999999999999996

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*

Probab=99.96  E-value=1.1e-28  Score=196.12  Aligned_cols=117  Identities=19%  Similarity=0.259  Sum_probs=101.1

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++.+++..+.. +...++...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..++++
T Consensus       127 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l  206 (500)
T 2j6l_A          127 CDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKI  206 (500)
T ss_dssp             HHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHH
Confidence            578888877664422 2122344567889999999999999999999999999999 69999999999999999998888


Q ss_pred             HHH----hCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIE----AGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~----ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.+    +|+|+|++|++++ +.+.++.|.+|+++|+|.||||+
T Consensus       207 ~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~  249 (500)
T 2j6l_A          207 IAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGST  249 (500)
T ss_dssp             HHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCH
T ss_pred             HHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCH
Confidence            765    5999999999999 77889999999999999999996

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A

Probab=99.96  E-value=1.8e-29  Score=200.44  Aligned_cols=117  Identities=27%  Similarity=0.453  Sum_probs=103.4

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++.+++..+.. +...++...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..++++
T Consensus       129 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l  208 (495)
T 1wnd_A          129 FRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAEL  208 (495)
T ss_dssp             HHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHH
Confidence            578888888764321 1111344678999999999999999999999999999999 79999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.++ +|+|++|++++++.+.++.|++|+++|+|.||||+
T Consensus       209 ~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~  247 (495)
T 1wnd_A          209 AKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSI  247 (495)
T ss_dssp             HTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCH
T ss_pred             HHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcH
Confidence            9999 99999999999777889999999999999999996

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}

Probab=99.96  E-value=3.9e-29  Score=198.99  Aligned_cols=118  Identities=28%  Similarity=0.362  Sum_probs=104.7

Q ss_pred             hHHHHHHhhhcCCCCCC-CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHH-HHHHH
Q psy1844           2 NAFFAKELTKYQPISED-PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSN-YTIYK   78 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~-~~~~~   78 (120)
                      ++||++.+++..+..+. ..++...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++ ..+.+
T Consensus       118 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~  197 (508)
T 3r64_A          118 TKESASFPGRVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPAR  197 (508)
T ss_dssp             HHHHTTSTTTCCEEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHH
T ss_pred             HHHHHHHhhhhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHH
Confidence            56777777765541111 13457789999999999999999999999999999999 69999999999999999 99999


Q ss_pred             HHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          79 IMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        79 ~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++.++|+|+|++|++++++.+.++.|++|+++|+|.||||+
T Consensus       198 ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~  238 (508)
T 3r64_A          198 IFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGST  238 (508)
T ss_dssp             HHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCH
T ss_pred             HHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCH
Confidence            99999999999999999778899999999999999999995

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}

Probab=99.96  E-value=8e-29  Score=196.43  Aligned_cols=117  Identities=30%  Similarity=0.406  Sum_probs=102.0

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++..++..+...........+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~  189 (490)
T 3ju8_A          110 VAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAW  189 (490)
T ss_dssp             HHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHH
Confidence            4677777776644221112334567779999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      .++|+|+|++|++++ +.+.++.|++|+++|+|.||||+
T Consensus       190 ~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~  227 (490)
T 3ju8_A          190 IQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSS  227 (490)
T ss_dssp             HHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCH
T ss_pred             HHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcH
Confidence            999999999999999 57899999999999999999996

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}

Probab=99.95  E-value=5.1e-29  Score=197.37  Aligned_cols=117  Identities=26%  Similarity=0.380  Sum_probs=100.8

Q ss_pred             hHHHHHHhhhcCCCC-CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKI   79 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~   79 (120)
                      ++||++..++..+.. ....++...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..++++
T Consensus       111 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l  190 (486)
T 1t90_A          111 VEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVEL  190 (486)
T ss_dssp             HHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHH
Confidence            466766555543321 1012345678999999999999999999999999999999 69999999999999999999999


Q ss_pred             HHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          80 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        80 l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++|+|+|++|++++ +.+.++.|++|+++|+|+||||+
T Consensus       191 ~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~  229 (486)
T 1t90_A          191 FEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSK  229 (486)
T ss_dssp             HHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCH
T ss_pred             HHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCH
Confidence            9999999999999998 56789999999999999999995

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}

Probab=99.95  E-value=5.6e-29  Score=196.70  Aligned_cols=114  Identities=27%  Similarity=0.425  Sum_probs=103.3

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+++.....    .....+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+++++
T Consensus       114 ~~~~a~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~  189 (478)
T 3ty7_A          114 FVAARDALDNYEFEE----RRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIF  189 (478)
T ss_dssp             HHHHHHHHHHCCSEE----EETTEEEEEEECCCEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhccc----CCccceEEecCceEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHH
Confidence            578888887764422    224678999999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|++|++++++.+.++.|..|+++|+|.||||+
T Consensus       190 ~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~  228 (478)
T 3ty7_A          190 DKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSG  228 (478)
T ss_dssp             HHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCH
T ss_pred             HHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcH
Confidence            999999999999999877899999999999999999985

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=99.95  E-value=2.1e-28  Score=206.66  Aligned_cols=118  Identities=28%  Similarity=0.358  Sum_probs=105.7

Q ss_pred             ChHHHHHHhhhcCCC--CCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHH
Q psy1844           1 LNAFFAKELTKYQPI--SEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIY   77 (120)
Q Consensus         1 ~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~   77 (120)
                      |++||++.+++..+.  ......+...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+++|+++..++
T Consensus       617 ~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~  696 (1001)
T 3haz_A          617 FCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAV  696 (1001)
T ss_dssp             HHHHHHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHH
Confidence            478999998876432  12224456788899999999999999999999999999999 699999999999999999999


Q ss_pred             HHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          78 KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        78 ~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++++|+|+|++|++++++.+ ++.|++||+||+|.||||+
T Consensus       697 ell~eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt  737 (1001)
T 3haz_A          697 ALLHEAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGST  737 (1001)
T ss_dssp             HHHHHHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCH
T ss_pred             HHHHHhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCH
Confidence            9999999999999999997766 9999999999999999996

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*

Probab=99.95  E-value=2.2e-28  Score=194.68  Aligned_cols=118  Identities=19%  Similarity=0.285  Sum_probs=98.8

Q ss_pred             hHHHHHHhhh--cCC--CC---CC--CCCCcceEEEeccCeEEEEEcCCChhhhhH--Hhhhcccc-CCCeEEeecCCCc
Q psy1844           2 NAFFAKELTK--YQP--IS---ED--PKSTLNSLRYRGLDGFVAAVSPFNFTAIGG--NLAYTPAL-MGSSVLWKPSDTA   69 (120)
Q Consensus         2 ~~~~a~~~~~--~~~--~~---~~--~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~--~~~~~~al-aGN~vv~k~~~~~   69 (120)
                      ++||++.+++  ...  +.   +.  +......+++++|+|||++|+|||||+..+  ++++++|| +||+||+|||+.+
T Consensus        98 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~~t  177 (510)
T 1ez0_A           98 LRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAH  177 (510)
T ss_dssp             HHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTC
T ss_pred             HHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCCCc
Confidence            5788888875  211  10   00  111124688999999999999999999985  49999999 6999999999999


Q ss_pred             HHHHHHHHHHH----HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          70 LLSNYTIYKIM----IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        70 ~~~~~~~~~~l----~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      |+++..+++++    +++|+|+|++|++++++.+.++.|++|++||+|+||||+
T Consensus       178 p~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~  231 (510)
T 1ez0_A          178 PGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSV  231 (510)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCH
T ss_pred             hHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcH
Confidence            99999999998    567999999999999777889999999999999999995

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}

Probab=99.95  E-value=6.4e-28  Score=192.68  Aligned_cols=118  Identities=21%  Similarity=0.259  Sum_probs=100.0

Q ss_pred             hHHHHHHhhhcC---CCC----CC--CCCCcceEEEeccCeEEEEEcCCChhhhhHH--hhhcccc-CCCeEEeecCCCc
Q psy1844           2 NAFFAKELTKYQ---PIS----ED--PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGN--LAYTPAL-MGSSVLWKPSDTA   69 (120)
Q Consensus         2 ~~~~a~~~~~~~---~~~----~~--~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~--~~~~~al-aGN~vv~k~~~~~   69 (120)
                      ++||++.+++..   ...    +.  +.++...+++++|+|||++|+|||||+...+  +++++|| +||+||+|||+.+
T Consensus       131 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~t  210 (528)
T 3v4c_A          131 LRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAH  210 (528)
T ss_dssp             HHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTC
T ss_pred             HHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCC
Confidence            578898888731   110    00  1134457899999999999999999999865  8999999 6999999999999


Q ss_pred             HHHHHHHHHHHH----HhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          70 LLSNYTIYKIMI----EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        70 ~~~~~~~~~~l~----~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      |+++..+++++.    ++|+|+|++|++++++.+.++.|++||+||+|.||||+
T Consensus       211 p~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fTGS~  264 (528)
T 3v4c_A          211 PGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSL  264 (528)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEESCH
T ss_pred             cHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCh
Confidence            999999888764    67999999999999888899999999999999999995

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}

Probab=99.95  E-value=1.8e-27  Score=187.55  Aligned_cols=100  Identities=18%  Similarity=0.149  Sum_probs=92.5

Q ss_pred             CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHH----HHHHhCCCCCcEEEEe
Q psy1844          20 KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYK----IMIEAGVPPGVVNFVP   94 (120)
Q Consensus        20 ~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~----~l~~ag~p~g~~~~i~   94 (120)
                      +++...+++++|+|||++|+|||||+.++++++++|| +||+||+|||+.+|.++..+++    ++.++|+|+|++++++
T Consensus        97 ~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~  176 (464)
T 3k9d_A           97 DNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMT  176 (464)
T ss_dssp             ETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECS
T ss_pred             CCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEe
Confidence            3566789999999999999999999999999999999 6999999999999999998654    5678899999999999


Q ss_pred             CCChHHHHHHHhCCCcceEEEecCC
Q psy1844          95 ADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        95 ~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++.+.++.|++|++||+|.||||+
T Consensus       177 g~~~~~~~~L~~~~~vd~I~fTGs~  201 (464)
T 3k9d_A          177 VPTIQGTDQLMKHKDTAVILATGGS  201 (464)
T ss_dssp             SCCHHHHHHHHHCTTEEEEEECSCH
T ss_pred             CCCHHHHHHHHhCCCCCEEEEeCCh
Confidence            9888899999999999999999995

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*

Probab=99.94  E-value=5.9e-27  Score=184.33  Aligned_cols=115  Identities=22%  Similarity=0.220  Sum_probs=99.4

Q ss_pred             hHHHHHHhhhcCCC---CCC-CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHH
Q psy1844           2 NAFFAKELTKYQPI---SED-PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTI   76 (120)
Q Consensus         2 ~~~~a~~~~~~~~~---~~~-~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~   76 (120)
                      ++||++.+++....   ... ...+...+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+
T Consensus        97 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l  176 (457)
T 3lns_A           97 IDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVI  176 (457)
T ss_dssp             HHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHH
T ss_pred             HHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHH
Confidence            46788777765321   110 12345689999999999999999999999999999999 69999999999999999999


Q ss_pred             HHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          77 YKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        77 ~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++.++ +|+|++|++++ +.+.++.|++ +++|+|.||||+
T Consensus       177 ~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~  216 (457)
T 3lns_A          177 EKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSP  216 (457)
T ss_dssp             HHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCH
T ss_pred             HHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCH
Confidence            9999999 99999999999 6778899988 689999999996

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}

Probab=99.94  E-value=7.5e-27  Score=183.52  Aligned_cols=100  Identities=15%  Similarity=0.244  Sum_probs=90.4

Q ss_pred             CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH----HhCCCCCcEEEEe
Q psy1844          20 KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI----EAGVPPGVVNFVP   94 (120)
Q Consensus        20 ~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~----~ag~p~g~~~~i~   94 (120)
                      +++...+.+++|+||+++|+|||||+...++++++|| +||+||+|||+.+|+++..+++++.    ++|+|+|++++++
T Consensus        92 ~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~  171 (452)
T 3my7_A           92 DDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWID  171 (452)
T ss_dssp             -----CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECS
T ss_pred             CCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEc
Confidence            3445678999999999999999999999999999999 6999999999999999998888876    6899999999999


Q ss_pred             CCChHHHHHHHhCCCcceEEEecCC
Q psy1844          95 ADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        95 ~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++.+.++.|++||+||+|.||||+
T Consensus       172 g~~~~~~~~L~~~p~v~~V~fTGs~  196 (452)
T 3my7_A          172 QPSVELSNALMKHDDIALILATGGP  196 (452)
T ss_dssp             SCCHHHHHHHHHCTTCCEEEECSCH
T ss_pred             CCCHHHHHHHHhCCCccEEEEECcH
Confidence            9888899999999999999999995

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*

Probab=99.93  E-value=1.9e-26  Score=182.06  Aligned_cols=95  Identities=15%  Similarity=0.107  Sum_probs=87.8

Q ss_pred             CcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCChHH
Q psy1844          22 TLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVF  100 (120)
Q Consensus        22 ~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~~~  100 (120)
                      ....+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..++++++++ +|+|++|+++++ .+.
T Consensus       111 ~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~-~~~  188 (469)
T 3sza_A          111 QDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGG-VPE  188 (469)
T ss_dssp             TSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-SCTTTSCBCCCS-HHH
T ss_pred             CccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCcceEEEEECC-HHH
Confidence            34688999999999999999999999999999999 699999999999999999999999999 999999999994 455


Q ss_pred             HHHHHhCCCcceEEEecCC
Q psy1844         101 GDTITASPYLAGINFTGSV  119 (120)
Q Consensus       101 ~~~l~~~~~i~~v~ftGs~  119 (120)
                      +..|+.| ++|+|.||||+
T Consensus       189 ~~~ll~~-~vd~I~FTGS~  206 (469)
T 3sza_A          189 TTELLKE-RFDHILYTGST  206 (469)
T ss_dssp             HHHHTTS-CCSEEEEESCH
T ss_pred             HHHHHhc-CCCEEEEECCH
Confidence            6777778 79999999996

>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}

Probab=99.93  E-value=4.1e-26  Score=179.02  Aligned_cols=97  Identities=24%  Similarity=0.242  Sum_probs=88.3

Q ss_pred             CCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH----HHhCCCCCcEEEEeC
Q psy1844          21 STLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM----IEAGVPPGVVNFVPA   95 (120)
Q Consensus        21 ~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l----~~ag~p~g~~~~i~~   95 (120)
                      .+...+++++|+|||++|+||| | ..+++++++|| +||+||+|||+.+|+++..+.+++    +++|+|+|++|++++
T Consensus       127 ~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g  204 (444)
T 4ghk_A          127 SGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVET  204 (444)
T ss_dssp             TSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCC
T ss_pred             CCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEEEeC
Confidence            4567889999999999999998 8 58899999999 699999999999999999999997    789999999999998


Q ss_pred             CCh-HHHHHHHhCCCcceEEEecCC
Q psy1844          96 DGP-VFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        96 ~~~-~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++. +.++.|..|++||+|.||||+
T Consensus       205 ~~~~~~~~~L~~~p~vd~V~fTGs~  229 (444)
T 4ghk_A          205 ADRAAVGRLITMTEYVDVIVPRGGK  229 (444)
T ss_dssp             CCTHHHHHHTTCTTTCSEEEECSCH
T ss_pred             CCHHHHHHHHhcCCCccEEEEECcH
Confidence            554 578888889999999999985

>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}

Probab=99.93  E-value=2.1e-26  Score=181.83  Aligned_cols=115  Identities=21%  Similarity=0.184  Sum_probs=97.8

Q ss_pred             hHHHHHHhhhcCC-C-CCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQP-I-SEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYK   78 (120)
Q Consensus         2 ~~~~a~~~~~~~~-~-~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~   78 (120)
                      ++||++...+... . .....+......+++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.+
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~  174 (474)
T 4h7n_A           95 IDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAPLLM  174 (474)
T ss_dssp             HHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHHHHH
T ss_pred             HHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHHHHHh
Confidence            4567666655422 1 12234455677888999999999999999999999999999 5999999999999999999999


Q ss_pred             HHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          79 IMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        79 ~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++.++|+|+|+++++++ +.+.+..|..|  +|+|.||||+
T Consensus       175 ~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~  212 (474)
T 4h7n_A          175 ALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSV  212 (474)
T ss_dssp             HHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCH
T ss_pred             hhhhhcccccceeeccc-cchhhhhhhhc--cceEEecccc
Confidence            99999999999999999 56788889876  9999999995

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1

Probab=99.93  E-value=2e-26  Score=181.90  Aligned_cols=115  Identities=13%  Similarity=0.118  Sum_probs=96.5

Q ss_pred             hHHHHHHhhhcC------CCCCC-C--CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHH
Q psy1844           2 NAFFAKELTKYQ------PISED-P--KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALL   71 (120)
Q Consensus         2 ~~~~a~~~~~~~------~~~~~-~--~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~   71 (120)
                      ++|+++.+++..      +...+ .  +++...+++++|+|||++|+||| | ..+++++++|| +||+||+|||+.+|+
T Consensus        88 ~~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~  165 (468)
T 1vlu_A           88 FEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVN  165 (468)
T ss_dssp             HHHHHHHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHH
T ss_pred             HHHHHHHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHH
Confidence            467787777653      11100 0  12445789999999999999999 9 99999999999 699999999999999


Q ss_pred             HHHHHHHHHH----H----hCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          72 SNYTIYKIMI----E----AGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        72 ~~~~~~~~l~----~----ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++..+++++.    +    +|+|+|++|+++ ++++.++.|.+|+++|+|.||||+
T Consensus       166 t~~~l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~  220 (468)
T 1vlu_A          166 TFREMAKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSN  220 (468)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCH
T ss_pred             HHHHHHHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCH
Confidence            9999999995    8    999999999999 666788999999999999999996

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}

Probab=99.93  E-value=2.7e-26  Score=180.99  Aligned_cols=114  Identities=17%  Similarity=0.018  Sum_probs=89.4

Q ss_pred             hHHHHHHhhhcCCCCCCC---CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDP---KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIY   77 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~   77 (120)
                      ++||++.+++..+.....   .++...+++++|+|||++|+||| |.... +++++|| +||+||+|||+.+|+++..++
T Consensus       108 ~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~~~l~  185 (463)
T 2h5g_A          108 LRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSNRILH  185 (463)
T ss_dssp             HHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHHHHHH
T ss_pred             HHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHHHHHH
Confidence            578888777664422111   13446789999999999999776 66555 7899999 699999999999999999999


Q ss_pred             HHHHHh----CCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          78 KIMIEA----GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        78 ~~l~~a----g~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++.++    | |+|++|++++ +.+.++.|++|++||+|.||||+
T Consensus       186 ~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~  229 (463)
T 2h5g_A          186 LLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSS  229 (463)
T ss_dssp             HHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCH
T ss_pred             HHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCH
Confidence            999999    9 9999999999 66789999999999999999995

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*

Probab=99.93  E-value=5.8e-26  Score=181.59  Aligned_cols=115  Identities=23%  Similarity=0.346  Sum_probs=93.3

Q ss_pred             hHHHHHHhhhcCCCC--------CCCCCC-cceEEEeccC-eEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcH
Q psy1844           2 NAFFAKELTKYQPIS--------EDPKST-LNSLRYRGLD-GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTAL   70 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~--------~~~~~~-~~~~~~~~p~-Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~   70 (120)
                      ++||++.+++..+..        +...++ ...+++++|+ |||++|+|||||+..+++++++|| +||+||+|||+.+|
T Consensus       112 ~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp  191 (534)
T 2y53_A          112 LSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATA  191 (534)
T ss_dssp             HHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGH
T ss_pred             HHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcch
Confidence            578888877654321        111112 2457788896 999999999999999999999999 69999999999999


Q ss_pred             HHHHHHHHHHHHhC-CCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          71 LSNYTIYKIMIEAG-VPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        71 ~~~~~~~~~l~~ag-~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++..+++++.++| +|+|++|++++++.+..+.+   +++|+|.||||+
T Consensus       192 ~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~  238 (534)
T 2y53_A          192 WLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSA  238 (534)
T ss_dssp             HHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCH
T ss_pred             HHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCH
Confidence            99999999999999 89999999999654322222   579999999996

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1

Probab=99.92  E-value=1.5e-25  Score=175.19  Aligned_cols=116  Identities=18%  Similarity=0.127  Sum_probs=94.8

Q ss_pred             hHHHHHHhhhcCCCCC-C-CCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISE-D-PKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYK   78 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~-~-~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~   78 (120)
                      ++||+++.++.....+ . ...+...+++++|+|||++|+|||  +..+++++++|| +||+||+|||+.+|+++..+++
T Consensus        94 l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~~  171 (427)
T 1o20_A           94 CETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAIVS  171 (427)
T ss_dssp             HHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHH
T ss_pred             HHHHHhcccccCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHHHH
Confidence            4677766654211111 0 022445788999999999999886  468899999999 6999999999999999999999


Q ss_pred             HHH----HhCCCCCcEEEEeCC-ChHHHHHHHhCCCcceEEEecCC
Q psy1844          79 IMI----EAGVPPGVVNFVPAD-GPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        79 ~l~----~ag~p~g~~~~i~~~-~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++.    ++|+|+|++|++++. .++.++.|..|+++|+|+||||+
T Consensus       172 l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~  217 (427)
T 1o20_A          172 AIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGY  217 (427)
T ss_dssp             HHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCH
T ss_pred             HHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCCh
Confidence            998    679999999999984 45678899999999999999996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	120
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-22
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-22
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	1e-16
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-16
d1euha_	474	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-10
d1uzba_	516	c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen	3e-07

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score = 88.5 bits (219), Expect = 2e-22
 Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 1/118 (0%)

Query: 4   FFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVL 62
           + A    K Q  +        +       G    + P+NF  +       PAL  G++V+
Sbjct: 125 YCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVV 184

Query: 63  WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
            KP++   L+   +  ++ EAG PPGVVN VP  GP  G  I++   +  + FTGS  
Sbjct: 185 VKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTE 242

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 4e-22
 Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 1/118 (0%)

Query: 4   FFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVL 62
           ++A    KY   +        S       G    + P+NF  +       PAL  G+ V+
Sbjct: 125 YYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVV 184

Query: 63  WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
            K ++   L+   +  ++ EAG PPGVVN VP  GP  G  I +   +  + FTGS  
Sbjct: 185 MKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTE 242

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score = 72.5 bits (177), Expect = 1e-16
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 2/98 (2%)

Query: 24  NSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIE 82
            S+  R   G VA+++P+N+  +       PAL  G+ V+ KPS+   L+   + ++  +
Sbjct: 131 TSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAEL-AK 189

Query: 83  AGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
              P GVVN +   G   GD +T  P +  ++ TGS+ 
Sbjct: 190 DIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIA 227

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score = 71.3 bits (174), Expect = 2e-16
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 2/82 (2%)

Query: 40  PFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGP 98
            +N+  +       PAL  G++V++KPS    ++   + +I  EAGVP G+VN V     
Sbjct: 164 AWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAE 223

Query: 99  VFGDTITASPYLAGINFTGSVP 120
             G  +   P +A ++FTGSVP
Sbjct: 224 T-GSLLCHHPNVAKVSFTGSVP 244

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

 Score = 54.9 bits (131), Expect = 1e-10
 Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 1/87 (1%)

Query: 33  GFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTAL-LSNYTIYKIMIEAGVPPGVVN 91
           G V A+SPFN+          PAL+  +V+     T   +S   + +   EAG+P GV N
Sbjct: 144 GLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFN 203

Query: 92  FVPADGPVFGDTITASPYLAGINFTGS 118
            +   G   GD I     +  INFTGS
Sbjct: 204 TITGRGSEIGDYIVEHQAVNFINFTGS 230

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 45.3 bits (106), Expect = 3e-07
 Identities = 21/50 (42%), Positives = 29/50 (58%)

Query: 71  LSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 120
           +    +++I  EAG PPGVVNF+P  G   G  +   P +  INFTGS+ 
Sbjct: 214 VVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLE 263

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	120
d1bxsa_	494	Aldehyde reductase (dehydrogenase), ALDH {Sheep (O	99.97
d1o04a_	494	Aldehyde reductase (dehydrogenase), ALDH {Human (H	99.97
d1a4sa_	503	Aldehyde reductase (dehydrogenase), ALDH {Baltic c	99.96
d1uzba_	516	1-pyrroline-5-carboxylate dehydrogenase {Thermus t	99.96
d1wnda_	474	Putative betaine aldehyde dehydrogenase YdcW {Esch	99.95
d1ez0a_	504	Aldehyde reductase (dehydrogenase), ALDH {Vibrio h	99.94
d1euha_	474	Aldehyde reductase (dehydrogenase), ALDH {Streptoc	99.92
d1ky8a_	499	Non-phosphorylating glyceraldehyde-3-phosphate deh	99.88
d1ad3a_	446	Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat	99.86
d1o20a_	414	Gamma-glutamyl phosphate reductase {Thermotoga mar	99.71
d1vlua_	436	Gamma-glutamyl phosphate reductase {Baker's yeast	99.71

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=99.97  E-value=3e-31  Score=208.29  Aligned_cols=118  Identities=29%  Similarity=0.411  Sum_probs=108.1

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++..++..+...+...+...+++++|+||+++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.+++
T Consensus       123 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~  202 (494)
T d1bxsa_         123 LRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLI  202 (494)
T ss_dssp             HHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHH
T ss_pred             HHHHhhhhhhhcceeecCCCCceeEEEEccEEEEEEEeCccchhHHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHH
Confidence            5788888887765333345677889999999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|++|+|++++.+.++.|++||+|++|.||||+
T Consensus       203 ~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~  241 (494)
T d1bxsa_         203 KEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGST  241 (494)
T ss_dssp             HHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCH
T ss_pred             HHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCH
Confidence            999999999999999888899999999999999999995

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.97  E-value=5.3e-31  Score=206.93  Aligned_cols=118  Identities=29%  Similarity=0.446  Sum_probs=107.7

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++.+.+..+.......+...+++++|+|||++|+|||||+...++++++|| +||+||+|||+.+|+++..+.+++
T Consensus       123 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~  202 (494)
T d1o04a_         123 LRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLI  202 (494)
T ss_dssp             HHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCceeccCCCceeEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHH
Confidence            5788888887765333345667788999999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|++|++++++++.++.|+.|++|++|.||||+
T Consensus       203 ~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~  241 (494)
T d1o04a_         203 KEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGST  241 (494)
T ss_dssp             HHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCH
T ss_pred             HHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCH
Confidence            999999999999999888899999999999999999995

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

Probab=99.96  E-value=1.4e-29  Score=199.37  Aligned_cols=117  Identities=27%  Similarity=0.402  Sum_probs=106.3

Q ss_pred             hHHHHHHhhhcCCCCCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHH
Q psy1844           2 NAFFAKELTKYQPISEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIM   80 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l   80 (120)
                      ++||++..++........+++...+++++|+||+++|+|||||+...++++++|| +||+||+|||+.+|+++..+++++
T Consensus       126 l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~  205 (503)
T d1a4sa_         126 IEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIF  205 (503)
T ss_dssp             HHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHH
T ss_pred             ccccccccccccccccccCCCcccccccccceeeecccCCCChHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH
Confidence            5788888887755333234567789999999999999999999999999999999 699999999999999999999999


Q ss_pred             HHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          81 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        81 ~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++|+|+|++|++++ +.+.++.|++|++||+|.||||+
T Consensus       206 ~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~  243 (503)
T d1a4sa_         206 HEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSV  243 (503)
T ss_dssp             HHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCH
T ss_pred             HHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCH
Confidence            999999999999999 57899999999999999999995

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=7e-29  Score=195.66  Aligned_cols=119  Identities=28%  Similarity=0.468  Sum_probs=107.3

Q ss_pred             ChHHHHHHhhhcCCC--CCCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHH
Q psy1844           1 LNAFFAKELTKYQPI--SEDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIY   77 (120)
Q Consensus         1 ~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~   77 (120)
                      +++||++.+++....  ...+......+.+++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+.
T Consensus       141 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~  220 (516)
T d1uzba_         141 FIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVF  220 (516)
T ss_dssp             HHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHH
T ss_pred             HHHHHHHHHHhhhhcccccccccccceeEEeeccCccccccccccccccccccccchhhhcccccccccchhHHHHHHHH
Confidence            357888888877542  23345567788889999999999999999999999999999 699999999999999999999


Q ss_pred             HHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          78 KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        78 ~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      ++++++|+|+|++|++++++++.++.|++||+|++|.||||+
T Consensus       221 ~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~  262 (516)
T d1uzba_         221 EIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSL  262 (516)
T ss_dssp             HHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCH
T ss_pred             HHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccch
Confidence            999999999999999999888899999999999999999985

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.3e-28  Score=192.20  Aligned_cols=99  Identities=29%  Similarity=0.503  Sum_probs=93.7

Q ss_pred             CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCCh
Q psy1844          20 KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGP   98 (120)
Q Consensus        20 ~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~   98 (120)
                      .++...+++++|+||+++|+|||||+...++++++|| +||+||+|||+.+|+++..++++++++ +|+|++|+++++++
T Consensus       127 ~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~-lP~gv~~~v~g~~~  205 (474)
T d1wnda_         127 LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGK  205 (474)
T ss_dssp             ETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTT
T ss_pred             cCCcceEEEEecccceEEEeecchHhhhhhccHHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHHh-CCCCcEEEEeCCcH
Confidence            4567789999999999999999999999999999999 799999999999999999999999875 99999999999888


Q ss_pred             HHHHHHHhCCCcceEEEecCC
Q psy1844          99 VFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        99 ~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.++.|++||+|++|.||||+
T Consensus       206 ~~g~~L~~~p~i~~v~fTGS~  226 (474)
T d1wnda_         206 TVGDPLTGHPKVRMVSLTGSI  226 (474)
T ss_dssp             TTHHHHHTCTTEEEEEEESCH
T ss_pred             HHHHHHHhCCCcCEEEeeCCH
Confidence            899999999999999999995

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

Probab=99.94  E-value=1.8e-27  Score=187.25  Aligned_cols=119  Identities=18%  Similarity=0.222  Sum_probs=98.5

Q ss_pred             ChHHHHHHhhhcCCCC---------CCCCCCcceEEEeccCeEEEEEcCCChhhhhHH--hhhcccc-CCCeEEeecCCC
Q psy1844           1 LNAFFAKELTKYQPIS---------EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGN--LAYTPAL-MGSSVLWKPSDT   68 (120)
Q Consensus         1 ~~~~~a~~~~~~~~~~---------~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~--~~~~~al-aGN~vv~k~~~~   68 (120)
                      +++||++.+++.....         ..+.+....+.+++|+|||++|+|||||+....  .++++|| +||+||+|||+.
T Consensus        93 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaaGN~VVlKPs~~  172 (504)
T d1ez0a_          93 QLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTA  172 (504)
T ss_dssp             HHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTT
T ss_pred             HHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHHhccceecCccc
Confidence            3689998887643210         112445678889999999999999999986544  5899999 599999999999


Q ss_pred             cHHHHHHHH----HHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          69 ALLSNYTIY----KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        69 ~~~~~~~~~----~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +|.++..+.    ++++++|+|+|++|++++++.+.++.|++||+|++|.||||+
T Consensus       173 tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~  227 (504)
T d1ez0a_         173 HPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSV  227 (504)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCH
T ss_pred             ccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccch
Confidence            999987654    555677999999999999888899999999999999999985

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

Probab=99.92  E-value=1.1e-25  Score=174.80  Aligned_cols=100  Identities=32%  Similarity=0.481  Sum_probs=94.6

Q ss_pred             CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCCh
Q psy1844          20 KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGP   98 (120)
Q Consensus        20 ~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~   98 (120)
                      ......+++++|+||+++|+|||||+...+..+++|| +||+||+|||+.++.++..+.++++++|+|+|++|++++++.
T Consensus       131 ~~~~~~~~~r~P~GVV~~I~p~n~P~~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~  210 (474)
T d1euha_         131 SKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGS  210 (474)
T ss_dssp             GTTEEEEEEEEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHH
T ss_pred             cCCceeEEEeeceeEEEEeccccccchhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChH
Confidence            3455678899999999999999999999999999999 699999999999999999999999999999999999999878


Q ss_pred             HHHHHHHhCCCcceEEEecCC
Q psy1844          99 VFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        99 ~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.++.|..|++|+.|.||||.
T Consensus       211 ~~~~~L~~~~~v~~v~ftGs~  231 (474)
T d1euha_         211 EIGDYIVEHQAVNFINFTGST  231 (474)
T ss_dssp             HHHHHHHHCTTCCEEEEESCH
T ss_pred             HHHHHHHhCCCccEEEecCcc
Confidence            899999999999999999985

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=99.88  E-value=4.5e-23  Score=161.51  Aligned_cols=117  Identities=26%  Similarity=0.343  Sum_probs=101.1

Q ss_pred             hHHHHHHhhhcCCCC-----CCCCCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHH
Q psy1844           2 NAFFAKELTKYQPIS-----EDPKSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYT   75 (120)
Q Consensus         2 ~~~~a~~~~~~~~~~-----~~~~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~   75 (120)
                      ++||++.+++..+..     .........+++++|+|||++|+|||||+..+++.+++|| +||+||+|||+.+++++..
T Consensus       121 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~  200 (499)
T d1ky8a_         121 LRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAM  200 (499)
T ss_dssp             HHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHH
T ss_pred             ccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccchhhhhcchhhhcccccccccccccchhhhhh
Confidence            466677776654311     1123456788999999999999999999999999999999 6999999999999999999


Q ss_pred             HHHHHHHhCCCCCcEEEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          76 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        76 ~~~~l~~ag~p~g~~~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +.+++.++|.|+++++++.+++ +.+..|..|++++.+.||||.
T Consensus       201 l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ftGs~  243 (499)
T d1ky8a_         201 AVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGST  243 (499)
T ss_dssp             HHHHHHHHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEEEESCH
T ss_pred             hccccccccccceeeecccCCh-HHHHHHhhccceeEEEeeccc
Confidence            9999999999999999999864 567889999999999999985

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.86  E-value=8.2e-22  Score=152.58  Aligned_cols=97  Identities=15%  Similarity=0.133  Sum_probs=85.3

Q ss_pred             CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHhCCCCCcEEEEeCCCh
Q psy1844          20 KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGP   98 (120)
Q Consensus        20 ~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~ag~p~g~~~~i~~~~~   98 (120)
                      ......+++++|+|||++|+|||||+..+++++++|| +||+||+|||+.+|+++..+++++++. +|+++++++.+.+.
T Consensus        91 ~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~  169 (446)
T d1ad3a_          91 TQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQNLYLVVKGGVP  169 (446)
T ss_dssp             TTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCTTTEEECCCSHH
T ss_pred             CCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccc-ccccccccccccch
Confidence            4556678899999999999999999999999999999 699999999999999999999999775 89999999998544


Q ss_pred             HHHHHHHhCCCcceEEEecCC
Q psy1844          99 VFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        99 ~~~~~l~~~~~i~~v~ftGs~  119 (120)
                       ....+ .++++|.|.||||+
T Consensus       170 -~~~~~-~~~~~~~v~fTGs~  188 (446)
T d1ad3a_         170 -ETTEL-LKERFDHIMYTGST  188 (446)
T ss_dssp             -HHHHH-TTSCCSEEEEESCH
T ss_pred             -hhhhh-cccccCceEEECcH
Confidence             44444 46679999999985

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.71  E-value=4.3e-18  Score=130.04  Aligned_cols=97  Identities=15%  Similarity=0.029  Sum_probs=78.7

Q ss_pred             CCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHHHh----CCCCCcEEEEeC
Q psy1844          21 STLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEA----GVPPGVVNFVPA   95 (120)
Q Consensus        21 ~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~~a----g~p~g~~~~i~~   95 (120)
                      .......++.|.|++++++|||||+..+++++++|| +||+||+|||+.+|.++..++++++++    |+|.++++.+.+
T Consensus       100 ~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l~~~a~~~~~~~~~~~~~~~~  179 (414)
T d1o20a_         100 REDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIEN  179 (414)
T ss_dssp             CTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCC
T ss_pred             cccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhHHHhhhhhccccccccccccc
Confidence            334566777888999999999999999999999999 799999999999999999999999887    556666788777


Q ss_pred             CChHHHHHHHhCCCcceEEEec
Q psy1844          96 DGPVFGDTITASPYLAGINFTG  117 (120)
Q Consensus        96 ~~~~~~~~l~~~~~i~~v~ftG  117 (120)
                      ...+....+..++.+..+..++
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~  201 (414)
T d1o20a_         180 TDRSLVLEMIRLREYLSLVIPR  201 (414)
T ss_dssp             CCTHHHHHHTTCTTTCSEEEEC
T ss_pred             cchhhhhhcccccccCeEEEcc
Confidence            6666667766665555555444

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.71  E-value=8.4e-18  Score=129.87  Aligned_cols=97  Identities=16%  Similarity=0.158  Sum_probs=82.1

Q ss_pred             CCCcceEEEeccCeEEEEEcCCChhhhhHHhhhcccc-CCCeEEeecCCCcHHHHHHHHHHHH--------HhCCCCCcE
Q psy1844          20 KSTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMI--------EAGVPPGVV   90 (120)
Q Consensus        20 ~~~~~~~~~~~p~Gvv~~i~p~n~P~~~~~~~~~~al-aGN~vv~k~~~~~~~~~~~~~~~l~--------~ag~p~g~~   90 (120)
                      +.+...+.++.|+||+++| +|++| ..++...+.+| +||+||+||+++++.++..+.++++        ++|+|++++
T Consensus       104 ~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~~~~~~al~~a~~~aGlP~~~i  181 (436)
T d1vlua_         104 DDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSV  181 (436)
T ss_dssp             ETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSE
T ss_pred             cccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHHHHHHHHhhhhhccccCCCCceE
Confidence            3567788999999999998 66677 56667888888 6999999999999999988877664        669999999


Q ss_pred             EEEeCCChHHHHHHHhCCCcceEEEecCC
Q psy1844          91 NFVPADGPVFGDTITASPYLAGINFTGSV  119 (120)
Q Consensus        91 ~~i~~~~~~~~~~l~~~~~i~~v~ftGs~  119 (120)
                      +++++ +.++++.|..|+.||.|.||||.
T Consensus       182 ~~v~~-~~~v~~~l~~~~~Id~ii~tGg~  209 (436)
T d1vlua_         182 QLIET-RQDVSDLLDQDEYIDLVVPRGSN  209 (436)
T ss_dssp             EECCC-C--CGGGGGCTTTCCEEEEESCH
T ss_pred             EEecc-hhHHHHHhccCCCCceEEEecCC
Confidence            99987 56788999999999999999984