Psyllid ID: psy1878

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
Protein Sequence
MSLIISFKTICPVAIGQLTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVKSYLDYDYK
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHcccccEEEccccccccHHHHHHccccccccccccccHHHHHHHHHHHHHccccccccccccccccHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEccccccHHHHccEEEEccccEEEccccccccHHHHHHHccEEEccccccccHHHHHHHHHHHHHcHHHcHHHcEccEEEEcccEcHHHccccc
Coil and Loop (DISEMBL)
MSLIISFKTICPVAIGQLTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYygnnqdtivpnagpghwndpdmvksyldydyk
Flexible Loop (DISEMBL)
MSLIISFKTICPVAIGQLTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVpnagpghwndpdmvKSYLDYDYK
Low Complexity Region (SEG)
MSLIISFKTICPVAIGQLTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVKSYLDYDYK
Disordered region (IsUnstruct)
**LIISFKTICPVAIGQLTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVKSYL*****
Disordered Region (DISOPRED)
****ISFKTICPVAIGQLTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVKSYLD****
Disordered Region (DISEMBL)
MSLIISFKTICPVAIGQLTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVKSYLDYDYK
Disordered Region (DISPRO)
*SLIISFKTICPVAIGQLTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVKSYLDYDYK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSLIISFKTICPVAIGQLTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVKSYLDYDYK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	98	2.2.26 [Sep-21-2011]
Q90744	405	Alpha-N-acetylgalactosami	yes	N/A	0.663	0.160	0.569	5e-16
Q58DH9	411	Alpha-N-acetylgalactosami	yes	N/A	0.551	0.131	0.611	1e-15
Q9QWR8	415	Alpha-N-acetylgalactosami	yes	N/A	0.551	0.130	0.592	5e-15
Q66H12	415	Alpha-N-acetylgalactosami	yes	N/A	0.551	0.130	0.574	2e-14
P06280	429	Alpha-galactosidase A OS=	yes	N/A	0.663	0.151	0.507	4e-14
P17050	411	Alpha-N-acetylgalactosami	no	N/A	0.551	0.131	0.574	8e-14
P51569	419	Alpha-galactosidase A OS=	no	N/A	0.561	0.131	0.545	2e-11
P14749	411	Alpha-galactosidase OS=Cy	N/A	N/A	0.428	0.102	0.478	1e-05
Q42656	378	Alpha-galactosidase OS=Co	N/A	N/A	0.428	0.111	0.478	8e-05
Q9FXT4	417	Alpha-galactosidase OS=Or	no	N/A	0.428	0.100	0.456	0.0004

>sp|Q90744|NAGAB_CHICK Alpha-N-acetylgalactosaminidase OS=Gallus gallus GN=NAGA PE=1 SV=1

 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 7/72 (9%)

Query: 25  IGYTC-----QAYLIP--NFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPN 77
           I Y+C     Q  L P  N+T + E CNLWRN+DDIQDSW S+ SI+D++  NQD + P 
Sbjct: 167 IVYSCSWPAYQGGLPPKVNYTLLGEICNLWRNYDDIQDSWDSVLSIVDWFFTNQDVLQPF 226

Query: 78  AGPGHWNDPDMV 89
           AGPGHWNDPDM+
Sbjct: 227 AGPGHWNDPDML 238

Removes terminal alpha-N-acetylgalactosamine residues from glycolipids and glycopeptides. Required for the breakdown of glycolipids.
Gallus gallus (taxid: 9031)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4EC: 9

>sp|Q58DH9|NAGAB_BOVIN Alpha-N-acetylgalactosaminidase OS=Bos taurus GN=NAGA PE=2 SV=1

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 33/54 (61%), Positives = 45/54 (83%)

Query: 36  NFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV 89
           N+T + + CNLWRNFDDIQDSW+S+ S++D++  +QD + P AGPGHWNDPDM+
Sbjct: 201 NYTLLADICNLWRNFDDIQDSWRSVLSVLDWFVTHQDVLQPIAGPGHWNDPDML 254

Removes terminal alpha-N-acetylgalactosamine residues from glycolipids and glycopeptides. Required for the breakdown of glycolipids.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 9

>sp|Q9QWR8|NAGAB_MOUSE Alpha-N-acetylgalactosaminidase OS=Mus musculus GN=Naga PE=2 SV=2

 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 32/54 (59%), Positives = 43/54 (79%)

Query: 36  NFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV 89
           N+T +   CNLWRN+ DIQDSW+S+ SI+D++  +QD + P AGPGHWNDPDM+
Sbjct: 201 NYTEVSRVCNLWRNYKDIQDSWKSVLSILDWFVRHQDVLQPVAGPGHWNDPDML 254

Removes terminal alpha-N-acetylgalactosamine residues from glycolipids and glycopeptides. Required for the breakdown of glycolipids.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 9

>sp|Q66H12|NAGAB_RAT Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus GN=Naga PE=2 SV=1

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 43/54 (79%)

Query: 36  NFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV 89
           N+T +   CNLWRN+ DIQDSW+S+ SI+D++  +QD + P +GPGHWNDPDM+
Sbjct: 201 NYTEVAGTCNLWRNYKDIQDSWKSVLSILDWFVKHQDILQPVSGPGHWNDPDML 254

Removes terminal alpha-N-acetylgalactosamine residues from glycolipids and glycopeptides. Required for the breakdown of glycolipids.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 9

>sp|P06280|AGAL_HUMAN Alpha-galactosidase A OS=Homo sapiens GN=GLA PE=1 SV=1

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 6/71 (8%)

Query: 25  IGYTCQ------AYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNA 78
           I Y+C+       +  PN+T I ++CN WRNF DI DSW+S++SI+D+   NQ+ IV  A
Sbjct: 198 IVYSCEWPLYMWPFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVA 257

Query: 79  GPGHWNDPDMV 89
           GPG WNDPDM+
Sbjct: 258 GPGGWNDPDML 268

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 2

>sp|P17050|NAGAB_HUMAN Alpha-N-acetylgalactosaminidase OS=Homo sapiens GN=NAGA PE=1 SV=2

 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 44/54 (81%)

Query: 36  NFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV 89
           N++ + + CNLWRN+DDIQDSW S+ SI++++  +QD + P AGPGHWNDPDM+
Sbjct: 201 NYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQPVAGPGHWNDPDML 254

Removes terminal alpha-N-acetylgalactosamine residues from glycolipids and glycopeptides. Required for the breakdown of glycolipids.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 9

>sp|P51569|AGAL_MOUSE Alpha-galactosidase A OS=Mus musculus GN=Gla PE=1 SV=1

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 40/55 (72%)

Query: 35  PNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV 89
           PN+T I  +CN WRNFDD+ DSW+S+++I+ +    Q  IV  AGPG WNDPDM+
Sbjct: 214 PNYTDIQYYCNHWRNFDDVYDSWESIKNILSWTVVYQKEIVEVAGPGSWNDPDML 268

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 2

>sp|P14749|AGAL_CYATE Alpha-galactosidase OS=Cyamopsis tetragonoloba PE=1 SV=1

 Score = 48.9 bits (115), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 4/46 (8%)

Query: 45  NLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVK 90
           N WR   DI+D+W S+ SI D    + D     AGPG WNDPDM++
Sbjct: 225 NSWRTTGDIEDNWNSMTSIAD----SNDKWASYAGPGGWNDPDMLE 266

Involved in the hydrolysis of the galactomannan, it splits alpha-linked galactose moieties. It is particularly suitable for the hydrolysis of guar gum to a gum with improved gelling properties. Preferentially cleaves alpha-1,6 glycoside linkages.

Cyamopsis tetragonoloba (taxid: 3832)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 2

>sp|Q42656|AGAL_COFAR Alpha-galactosidase OS=Coffea arabica PE=1 SV=1

 Score = 45.8 bits (107), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 4/46 (8%)

Query: 45  NLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVK 90
           N WR   DI DSW S+ S  D      D     AGPG WNDPDM++
Sbjct: 193 NSWRTTGDIDDSWSSMTSRADM----NDKWASYAGPGGWNDPDMLE 234

Preferentially cleaves alpha-1,3 and alpha-1,4 glycoside linkages. Involved in the hydrolysis of the galactomannan, it splits alpha-linked galactose moieties. It is particularly suitable for the hydrolysis of guar gum to a gum with improved gelling properties. Can cleave terminal alpha-1,3-linked galactose residues responsible for blood group B specificity from the surface of erythrocytes thereby converting these cells serologically to group O.

Coffea arabica (taxid: 13443)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 2

>sp|Q9FXT4|AGAL_ORYSJ Alpha-galactosidase OS=Oryza sativa subsp. japonica GN=Os10g0493600 PE=1 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 4/46 (8%)

Query: 45  NLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVK 90
           N WR   DI D+W S+ S  D      D     AGPG WNDPDM++
Sbjct: 233 NSWRTTGDIADNWGSMTSRAD----ENDQWAAYAGPGGWNDPDMLE 274

Hydrolyzes melibiose, raffinose and stachyose in the following decreasing order of reactivity: raffinose, melibiose, stachyose.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	98
307213390	1392	Alpha-N-acetylgalactosaminidase [Harpegn	0.642	0.045	0.809	4e-27
357625144	269	putative alpha-galactosidase/alpha-n-ace	0.744	0.271	0.739	6e-25
389608287	439	similar to CG5731 [Papilio xuthus]	0.744	0.166	0.739	9e-25
332025551	934	Alpha-N-acetylgalactosaminidase [Acromyr	0.642	0.067	0.777	2e-24
283483326	443	putative alpha-N-acetylgalactosaminidase	0.642	0.142	0.825	2e-24
156551900	438	PREDICTED: alpha-N-acetylgalactosaminida	0.744	0.166	0.712	3e-24
91080949	442	PREDICTED: similar to alpha-galactosidas	0.642	0.142	0.825	4e-24
340722731	439	PREDICTED: alpha-N-acetylgalactosaminida	0.642	0.143	0.809	4e-24
350424081	439	PREDICTED: alpha-N-acetylgalactosaminida	0.642	0.143	0.809	4e-24
332373270	443	unknown [Dendroctonus ponderosae]	0.642	0.142	0.793	9e-24

>gi|307213390|gb|EFN88826.1| Alpha-N-acetylgalactosaminidase [Harpegnathos saltator]

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 51/63 (80%), Positives = 56/63 (88%)

Query: 27   YTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDP 86
            Y   A + PN+T+IIEHCNLWRNFDDIQDSW S+ESIIDYYGNNQD IVPNAGPGHWNDP
Sbjct: 1076 YQIYAGMQPNYTAIIEHCNLWRNFDDIQDSWASVESIIDYYGNNQDAIVPNAGPGHWNDP 1135

Query: 87   DMV 89
            DM+
Sbjct: 1136 DML 1138

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357625144|gb|EHJ75680.1| putative alpha-galactosidase/alpha-n-acetylgalactosaminidase [Danaus plexippus]

 Score =  117 bits (294), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 54/73 (73%), Positives = 59/73 (80%)

Query: 17 QLTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVP 76
          Q+ Y      Y   A L PNF+SIIEHCNLWRNFDDIQDSW S+ESIIDYYGN+QD IVP
Sbjct: 18 QMVYSCSWPVYQIYAGLQPNFSSIIEHCNLWRNFDDIQDSWASVESIIDYYGNHQDVIVP 77

Query: 77 NAGPGHWNDPDMV 89
          NAGPGHWNDPDM+
Sbjct: 78 NAGPGHWNDPDML 90

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|389608287|dbj|BAM17755.1| similar to CG5731 [Papilio xuthus]

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 54/73 (73%), Positives = 59/73 (80%)

Query: 17  QLTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVP 76
           Q+ Y      Y   A + PNFTSIIEHCNLWRNFDDIQDSW S+ESIIDYYGN+QD IVP
Sbjct: 187 QMVYSCSWPVYQIYAGIQPNFTSIIEHCNLWRNFDDIQDSWASVESIIDYYGNHQDVIVP 246

Query: 77  NAGPGHWNDPDMV 89
           NAGPGHWNDPDM+
Sbjct: 247 NAGPGHWNDPDML 259

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332025551|gb|EGI65714.1| Alpha-N-acetylgalactosaminidase [Acromyrmex echinatior]

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/63 (77%), Positives = 54/63 (85%)

Query: 27  YTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDP 86
           Y   A + PN+TSI E+CNLWRNFDDIQDSW S+ESIIDYYGNNQD IV NAGPGHWNDP
Sbjct: 693 YQIYAGMKPNYTSIAENCNLWRNFDDIQDSWASVESIIDYYGNNQDAIVSNAGPGHWNDP 752

Query: 87  DMV 89
           DM+
Sbjct: 753 DML 755

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|283483326|emb|CAX20733.1| putative alpha-N-acetylgalactosaminidase [Chorthippus parallelus]

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/63 (82%), Positives = 56/63 (88%)

Query: 27  YTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDP 86
           Y   + + PNFTSIIEHCNLWRNFDDIQDSW S+ESIIDYYGNNQD IVPNAGPGHWNDP
Sbjct: 194 YQIYSGMSPNFTSIIEHCNLWRNFDDIQDSWASVESIIDYYGNNQDIIVPNAGPGHWNDP 253

Query: 87  DMV 89
           DM+
Sbjct: 254 DML 256

Source: Chorthippus parallelus

Species: Chorthippus parallelus

Genus: Chorthippus

Family: Acrididae

Order: Orthoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156551900|ref|XP_001606799.1| PREDICTED: alpha-N-acetylgalactosaminidase-like [Nasonia vitripennis]

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 52/73 (71%), Positives = 59/73 (80%)

Query: 17  QLTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVP 76
           Q+ Y      Y   A + PNFT+II+HCNLWRNFDDIQDSW S+E+IIDYYGNNQD IVP
Sbjct: 185 QMIYSCSWPVYQIYAGMQPNFTAIIQHCNLWRNFDDIQDSWASVETIIDYYGNNQDAIVP 244

Query: 77  NAGPGHWNDPDMV 89
           NAGPGHWNDPDM+
Sbjct: 245 NAGPGHWNDPDML 257

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91080949|ref|XP_974398.1| PREDICTED: similar to alpha-galactosidase/alpha-n-acetylgalactosaminidase [Tribolium castaneum] gi|270005370|gb|EFA01818.1| hypothetical protein TcasGA2_TC007420 [Tribolium castaneum]

 Score =  115 bits (288), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 52/63 (82%), Positives = 55/63 (87%)

Query: 27  YTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDP 86
           Y   A + PNFTSIIEHCNLWRNFDDIQDSW S+ESIIDYYGNNQD IV NAGPGHWNDP
Sbjct: 195 YQIYAGMQPNFTSIIEHCNLWRNFDDIQDSWASVESIIDYYGNNQDVIVANAGPGHWNDP 254

Query: 87  DMV 89
           DM+
Sbjct: 255 DML 257

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340722731|ref|XP_003399756.1| PREDICTED: alpha-N-acetylgalactosaminidase-like [Bombus terrestris]

 Score =  115 bits (288), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 51/63 (80%), Positives = 55/63 (87%)

Query: 27  YTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDP 86
           Y   A + PNFT+I EHCNLWRNFDDIQDSW SLE+IIDYYGNNQD IVPNAGPGHWNDP
Sbjct: 195 YQIYAGMQPNFTAITEHCNLWRNFDDIQDSWNSLETIIDYYGNNQDAIVPNAGPGHWNDP 254

Query: 87  DMV 89
           DM+
Sbjct: 255 DML 257

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350424081|ref|XP_003493682.1| PREDICTED: alpha-N-acetylgalactosaminidase-like [Bombus impatiens]

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 51/63 (80%), Positives = 55/63 (87%)

Query: 27  YTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDP 86
           Y   A + PNFT+I EHCNLWRNFDDIQDSW SLE+IIDYYGNNQD IVPNAGPGHWNDP
Sbjct: 195 YQIYAGMQPNFTAITEHCNLWRNFDDIQDSWNSLETIIDYYGNNQDAIVPNAGPGHWNDP 254

Query: 87  DMV 89
           DM+
Sbjct: 255 DML 257

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332373270|gb|AEE61776.1| unknown [Dendroctonus ponderosae]

 Score =  114 bits (284), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 50/63 (79%), Positives = 55/63 (87%)

Query: 27  YTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDP 86
           Y   A + PNFTSII+ CN+WRNFDDIQDSW S+ESIIDYYGNNQD IVPNAGPGHWNDP
Sbjct: 196 YQIYAGMAPNFTSIIQSCNMWRNFDDIQDSWASVESIIDYYGNNQDVIVPNAGPGHWNDP 255

Query: 87  DMV 89
           DM+
Sbjct: 256 DML 258

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	98
FB|FBgn0032192	427	CG5731 [Drosophila melanogaste	0.642	0.147	0.714	1.5e-23
FB|FBgn0034117	417	CG7997 [Drosophila melanogaste	0.806	0.189	0.512	3.6e-18
UNIPROTKB|F1NJF8	405	NAGA "Alpha-N-acetylgalactosam	0.663	0.160	0.583	4.1e-17
UNIPROTKB|Q90744	405	NAGA "Alpha-N-acetylgalactosam	0.663	0.160	0.583	4.1e-17
UNIPROTKB|I3LQE0	433	GLA "Uncharacterized protein"	0.612	0.138	0.6	6.6e-17
UNIPROTKB|E2RRW9	411	NAGA "Uncharacterized protein"	0.663	0.158	0.555	7.2e-17
UNIPROTKB|Q1RMM9	411	NAGA "Alpha-N-acetylgalactosam	0.663	0.158	0.541	1.2e-16
UNIPROTKB|Q58DH9	411	NAGA "Alpha-N-acetylgalactosam	0.663	0.158	0.541	1.2e-16
UNIPROTKB|D4A285	282	Naga "Alpha-N-acetylgalactosam	0.663	0.230	0.527	3.7e-16
ZFIN|ZDB-GENE-051113-256	415	naga "N-acetylgalactosaminidas	0.653	0.154	0.549	5.7e-16

FB|FBgn0032192 CG5731 [Drosophila melanogaster (taxid:7227)]

 Score = 273 (101.2 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 45/63 (71%), Positives = 53/63 (84%)

Query:    27 YTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDP 86
             Y   A + PN+++I  HCNLWRN+DDIQDSW S+E+IIDYYGNNQD I PNAGPGHWNDP
Sbjct:   192 YQIYAGIQPNYSAIQTHCNLWRNYDDIQDSWASVENIIDYYGNNQDVIAPNAGPGHWNDP 251

Query:    87 DMV 89
             DM+
Sbjct:   252 DML 254

GO:0008456 "alpha-N-acetylgalactosaminidase activity" evidence=ISS

GO:0016139 "glycoside catabolic process" evidence=IBA

GO:0009311 "oligosaccharide metabolic process" evidence=IBA

GO:0004557 "alpha-galactosidase activity" evidence=IBA

GO:0046477 "glycosylceramide catabolic process" evidence=IBA

GO:0005737 "cytoplasm" evidence=IBA

FB|FBgn0034117 CG7997 [Drosophila melanogaster (taxid:7227)]

 Score = 225 (84.3 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 42/82 (51%), Positives = 55/82 (67%)

Query:    18 LTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPN 77
             + Y      Y   A  +P++ S+ +HCNLWRN+DDI+DS +SL  IIDY+  NQD I P+
Sbjct:   190 MVYSCSWPAYQEDAGEMPDYESLKQHCNLWRNWDDIEDSLESLMQIIDYFAKNQDRIQPH 249

Query:    78 AGPGHWNDPDMVK--SY-LDYD 96
              GPGHWNDPDM+   +Y L YD
Sbjct:   250 GGPGHWNDPDMLLLGNYGLSYD 271

GO:0004557 "alpha-galactosidase activity" evidence=ISS;IBA

GO:0046477 "glycosylceramide catabolic process" evidence=IBA

GO:0016139 "glycoside catabolic process" evidence=IBA

GO:0009311 "oligosaccharide metabolic process" evidence=IBA

GO:0005737 "cytoplasm" evidence=IBA

UNIPROTKB|F1NJF8 NAGA "Alpha-N-acetylgalactosaminidase" [Gallus gallus (taxid:9031)]

 Score = 215 (80.7 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 42/72 (58%), Positives = 52/72 (72%)

Query:    25 IGYTCQ--AY---LIP--NFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPN 77
             I Y+C   AY   L P  N+T + E CNLWRN+DDIQDSW S+ SI+D++  NQD + P 
Sbjct:   167 IVYSCSWPAYQGGLPPKVNYTLLGEICNLWRNYDDIQDSWDSVLSIVDWFFTNQDVLQPF 226

Query:    78 AGPGHWNDPDMV 89
             AGPGHWNDPDM+
Sbjct:   227 AGPGHWNDPDML 238

GO:0008456 "alpha-N-acetylgalactosaminidase activity" evidence=IEA

GO:0016052 "carbohydrate catabolic process" evidence=IEA

GO:0019377 "glycolipid catabolic process" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

UNIPROTKB|Q90744 NAGA "Alpha-N-acetylgalactosaminidase" [Gallus gallus (taxid:9031)]

 Score = 215 (80.7 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 42/72 (58%), Positives = 52/72 (72%)

Query:    25 IGYTCQ--AY---LIP--NFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPN 77
             I Y+C   AY   L P  N+T + E CNLWRN+DDIQDSW S+ SI+D++  NQD + P 
Sbjct:   167 IVYSCSWPAYQGGLPPKVNYTLLGEICNLWRNYDDIQDSWDSVLSIVDWFFTNQDVLQPF 226

Query:    78 AGPGHWNDPDMV 89
             AGPGHWNDPDM+
Sbjct:   227 AGPGHWNDPDML 238

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0008456 "alpha-N-acetylgalactosaminidase activity" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

UNIPROTKB|I3LQE0 GLA "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 214 (80.4 bits), Expect = 6.6e-17, P = 6.6e-17
 Identities = 36/60 (60%), Positives = 47/60 (78%)

Query:    30 QAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV 89
             Q +  PN+T I E+CN WRNF DI DSWQS+++I+D+  +NQ+ IVP AGPG WNDPDM+
Sbjct:   213 QPFFKPNYTEIREYCNHWRNFADIYDSWQSIKNILDWTSSNQEKIVPVAGPGGWNDPDML 272

GO:0051001 "negative regulation of nitric-oxide synthase activity" evidence=IEA

GO:0046477 "glycosylceramide catabolic process" evidence=IEA

GO:0045019 "negative regulation of nitric oxide biosynthetic process" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0009311 "oligosaccharide metabolic process" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

GO:0004557 "alpha-galactosidase activity" evidence=IEA

UNIPROTKB|E2RRW9 NAGA "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 213 (80.0 bits), Expect = 7.2e-17, P = 7.2e-17
 Identities = 40/72 (55%), Positives = 53/72 (73%)

Query:    25 IGYTCQ--AY---LIP--NFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPN 77
             I ++C   AY   L P  N+T + E CN+WRN+DDIQDSW S+ SI+D++ +NQD + P 
Sbjct:   183 IAFSCSWPAYEGGLPPKVNYTLLTEICNVWRNYDDIQDSWSSVLSILDWFVDNQDILQPV 242

Query:    78 AGPGHWNDPDMV 89
             AGPGHWNDPDM+
Sbjct:   243 AGPGHWNDPDML 254

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA

UNIPROTKB|Q1RMM9 NAGA "Alpha-N-acetylgalactosaminidase" [Bos taurus (taxid:9913)]

 Score = 211 (79.3 bits), Expect = 1.2e-16, P = 1.2e-16
 Identities = 39/72 (54%), Positives = 53/72 (73%)

Query:    25 IGYTCQ--AY---LIP--NFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPN 77
             I ++C   AY   L P  N+T + + CNLWRNFDDIQDSW+S+ S++D++  +QD + P 
Sbjct:   183 IAFSCSWPAYEGGLPPKVNYTLLADICNLWRNFDDIQDSWRSVLSVLDWFVTHQDVLQPI 242

Query:    78 AGPGHWNDPDMV 89
             AGPGHWNDPDM+
Sbjct:   243 AGPGHWNDPDML 254

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0019377 "glycolipid catabolic process" evidence=IEA

GO:0016052 "carbohydrate catabolic process" evidence=IEA

GO:0008456 "alpha-N-acetylgalactosaminidase activity" evidence=IEA

UNIPROTKB|Q58DH9 NAGA "Alpha-N-acetylgalactosaminidase" [Bos taurus (taxid:9913)]

 Score = 211 (79.3 bits), Expect = 1.2e-16, P = 1.2e-16
 Identities = 39/72 (54%), Positives = 53/72 (73%)

Query:    25 IGYTCQ--AY---LIP--NFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPN 77
             I ++C   AY   L P  N+T + + CNLWRNFDDIQDSW+S+ S++D++  +QD + P 
Sbjct:   183 IAFSCSWPAYEGGLPPKVNYTLLADICNLWRNFDDIQDSWRSVLSVLDWFVTHQDVLQPI 242

Query:    78 AGPGHWNDPDMV 89
             AGPGHWNDPDM+
Sbjct:   243 AGPGHWNDPDML 254

GO:0019377 "glycolipid catabolic process" evidence=ISS

GO:0008456 "alpha-N-acetylgalactosaminidase activity" evidence=ISS

GO:0016052 "carbohydrate catabolic process" evidence=ISS

GO:0046477 "glycosylceramide catabolic process" evidence=ISS

GO:0016139 "glycoside catabolic process" evidence=ISS

GO:0009311 "oligosaccharide metabolic process" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0004557 "alpha-galactosidase activity" evidence=ISS

GO:0005764 "lysosome" evidence=IEA

UNIPROTKB|D4A285 Naga "Alpha-N-acetylgalactosaminidase" [Rattus norvegicus (taxid:10116)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 38/72 (52%), Positives = 51/72 (70%)

Query:    25 IGYTCQ--AY---LIP--NFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPN 77
             I ++C   AY   L P  N+T +   CNLWRN+ DIQDSW+S+ SI+D++  +QD + P 
Sbjct:   183 IAFSCSWPAYEGGLPPKVNYTEVAGTCNLWRNYKDIQDSWKSVLSILDWFVKHQDILQPV 242

Query:    78 AGPGHWNDPDMV 89
             +GPGHWNDPDMV
Sbjct:   243 SGPGHWNDPDMV 254

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

ZFIN|ZDB-GENE-051113-256 naga "N-acetylgalactosaminidase, alpha" [Danio rerio (taxid:7955)]

 Score = 205 (77.2 bits), Expect = 5.7e-16, P = 5.7e-16
 Identities = 39/71 (54%), Positives = 50/71 (70%)

Query:    25 IGYTCQ--AY---LIP--NFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPN 77
             IGY+C   AY   L P  N+T + + CNLWRN+DDIQDSW S+  I+D++ +NQD + P 
Sbjct:   162 IGYSCSWPAYQGGLPPKVNYTLLGQICNLWRNYDDIQDSWDSVMGIVDWFFDNQDALQPA 221

Query:    78 AGPGHWNDPDM 88
             A PG WNDPDM
Sbjct:   222 AAPGQWNDPDM 232

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009311 "oligosaccharide metabolic process" evidence=IBA

GO:0008456 "alpha-N-acetylgalactosaminidase activity" evidence=IBA

GO:0005737 "cytoplasm" evidence=IBA

GO:0004557 "alpha-galactosidase activity" evidence=IBA

GO:0016139 "glycoside catabolic process" evidence=IBA

GO:0046477 "glycosylceramide catabolic process" evidence=IBA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9QWR8	NAGAB_MOUSE	3, ., 2, ., 1, ., 4, 9	0.5925	0.5510	0.1301	yes	N/A
Q58DH9	NAGAB_BOVIN	3, ., 2, ., 1, ., 4, 9	0.6111	0.5510	0.1313	yes	N/A
P06280	AGAL_HUMAN	3, ., 2, ., 1, ., 2, 2	0.5070	0.6632	0.1515	yes	N/A
Q90744	NAGAB_CHICK	3, ., 2, ., 1, ., 4, 9	0.5694	0.6632	0.1604	yes	N/A
Q66H12	NAGAB_RAT	3, ., 2, ., 1, ., 4, 9	0.5740	0.5510	0.1301	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	98
PLN02229	427	PLN02229, PLN02229, alpha-galactosidase	2e-09
PLN02808	386	PLN02808, PLN02808, alpha-galactosidase	6e-08
PLN02692	412	PLN02692, PLN02692, alpha-galactosidase	1e-06

>gnl|CDD|177874 PLN02229, PLN02229, alpha-galactosidase

 Score = 52.2 bits (125), Expect = 2e-09
 Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 4/46 (8%)

Query: 45  NLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVK 90
           N WR  DDI D+W S+ +I D   NN+      AGPG WNDPDM++
Sbjct: 231 NSWRTTDDINDTWASMTTIADL--NNK--WAAYAGPGGWNDPDMLE 272

Length = 427

>gnl|CDD|166449 PLN02808, PLN02808, alpha-galactosidase

 Score = 48.0 bits (114), Expect = 6e-08
 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 4/46 (8%)

Query: 45  NLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVK 90
           N WR   DIQD+W S+ S  D      D     A PG WNDPDM++
Sbjct: 201 NSWRTTGDIQDNWDSMTSRAD----QNDRWASYARPGGWNDPDMLE 242

Length = 386

>gnl|CDD|178295 PLN02692, PLN02692, alpha-galactosidase

 Score = 44.6 bits (105), Expect = 1e-06
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 4/46 (8%)

Query: 45  NLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVK 90
           N WR  +DI D+W S+ S  D      +     A PG WNDPDM++
Sbjct: 225 NSWRTTNDISDTWDSMISRADM----NEVYAELARPGGWNDPDMLE 266

Length = 412

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	98
PLN02229	427	alpha-galactosidase	99.93
PLN02692	412	alpha-galactosidase	99.93
KOG2366|consensus	414		99.92
PLN02808	386	alpha-galactosidase	99.92
PLN03231	357	putative alpha-galactosidase; Provisional	99.87
PLN02899	633	alpha-galactosidase	99.76

>PLN02229 alpha-galactosidase

Probab=99.93  E-value=2.3e-27  Score=190.56  Aligned_cols=76  Identities=30%  Similarity=0.460  Sum_probs=69.5

Q ss_pred             ecccccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCcc
Q psy1878           9 TICPVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPD   87 (98)
Q Consensus         9 ~~~~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpD   87 (98)
                      ..+..+||||+|| |+||...      | |.|+.++|||||+++||+|+|++++++++.    ++.+++|+|||||||||
T Consensus       201 ~AL~~tGRpI~~SlC~WG~~~------p-~~w~~~~~n~WR~s~DI~d~W~sv~~i~~~----~~~~~~~agPG~wnDpD  269 (427)
T PLN02229        201 DALNATGRSIFYSLCEWGVDD------P-ALWAGKVGNSWRTTDDINDTWASMTTIADL----NNKWAAYAGPGGWNDPD  269 (427)
T ss_pred             HHHHhhCCCcEEEecCCCCCC------H-HHHHHhhcCeeeccCCcccccccHHHHHHH----HHHHHhhcCCCCCCCCC
Confidence            3467889999999 9999876      5 899999999999999999999999999984    67899999999999999


Q ss_pred             cccccCCC
Q psy1878          88 MVKSYLDY   95 (98)
Q Consensus        88 ML~VG~~~   95 (98)
                      ||+||+.+
T Consensus       270 ML~vGn~g  277 (427)
T PLN02229        270 MLEVGNGG  277 (427)
T ss_pred             eeeeCCCC
Confidence            99999864

>PLN02692 alpha-galactosidase

Probab=99.93  E-value=1.3e-26  Score=185.53  Aligned_cols=75  Identities=28%  Similarity=0.383  Sum_probs=68.9

Q ss_pred             cccccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCccc
Q psy1878          10 ICPVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDM   88 (98)
Q Consensus        10 ~~~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDM   88 (98)
                      .+..+||||+|| |+||...      | |.|++++|||||+++||+|+|+++.++++.    ++.+++|+||||||||||
T Consensus       196 AL~~tGRpI~~SlC~wg~~~------p-~~w~~~~~n~WR~s~DI~d~W~sv~~~~~~----~~~~~~~agPG~wnDpDM  264 (412)
T PLN02692        196 ALMKAGRPIFFSLCEWGDMH------P-ALWGSKVGNSWRTTNDISDTWDSMISRADM----NEVYAELARPGGWNDPDM  264 (412)
T ss_pred             HHHHhCCCeEEEecCCCcCC------h-hhhhhhcCCccccccccccchHhHHHHHHH----HHHHhhccCCCCCCCCCe
Confidence            456789999999 9999976      5 889999999999999999999999999984    688999999999999999


Q ss_pred             ccccCCC
Q psy1878          89 VKSYLDY   95 (98)
Q Consensus        89 L~VG~~~   95 (98)
                      |+||+++
T Consensus       265 L~VGn~g  271 (412)
T PLN02692        265 LEVGNGG  271 (412)
T ss_pred             EeECCCC
Confidence            9999865

>KOG2366|consensus

Probab=99.92  E-value=1.8e-26  Score=182.92  Aligned_cols=87  Identities=41%  Similarity=0.643  Sum_probs=80.1

Q ss_pred             cccccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCccc
Q psy1878          10 ICPVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDM   88 (98)
Q Consensus        10 ~~~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDM   88 (98)
                      .+-.+||||+|| |+||.+.....+.|+++=+.++||+||+++||.|+|.||.+|++++..+|+.+++++|||+||||||
T Consensus       182 aLN~tGrpi~ySlC~W~~~~~~~~~~pny~~i~~~~N~WR~~dDI~dtW~Sv~~I~d~~~~nqd~~~~~agPg~WNDpDm  261 (414)
T KOG2366|consen  182 ALNNTGRPIFYSLCSWPAYHPGLPHHPNYKNISTICNSWRTTDDIQDTWKSVDSIIDYICWNQDRIAPLAGPGGWNDPDM  261 (414)
T ss_pred             HHhccCCceEEEeccCcccccCccCCCcchhhhhhhccccchhhhhhHHHHHHHHHHHHhhhhhhhccccCCCCCCChhH
Confidence            355689999999 9999999777777888889999999999999999999999999988878999999999999999999


Q ss_pred             ccccCCCC
Q psy1878          89 VKSYLDYD   96 (98)
Q Consensus        89 L~VG~~~~   96 (98)
                      |+||+.++
T Consensus       262 L~iGN~G~  269 (414)
T KOG2366|consen  262 LEIGNGGM  269 (414)
T ss_pred             hhcCCCCc
Confidence            99999875

>PLN02808 alpha-galactosidase

Probab=99.92  E-value=2.6e-26  Score=182.62  Aligned_cols=75  Identities=31%  Similarity=0.406  Sum_probs=68.4

Q ss_pred             cccccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCccc
Q psy1878          10 ICPVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDM   88 (98)
Q Consensus        10 ~~~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDM   88 (98)
                      .+..++|||+|| |+||...      | |+|++++|||||+++||+++|+++.++++.    ++.+++++||||||||||
T Consensus       172 AL~~tGRpi~~slc~wg~~~------p-~~w~~~~~n~WR~s~Di~d~W~~v~~~~~~----~~~~~~~agPG~wnDpDM  240 (386)
T PLN02808        172 ALLNSGRPIFFSLCEWGQED------P-ATWAGDIGNSWRTTGDIQDNWDSMTSRADQ----NDRWASYARPGGWNDPDM  240 (386)
T ss_pred             HHHHhCCCeEEEecCCCCCC------H-HHHHHhhcCcccccCCcccchhhHHHHHHh----hhhhHhhcCCCCCCCCCe
Confidence            456779999999 9999765      4 899999999999999999999999999984    789999999999999999


Q ss_pred             ccccCCC
Q psy1878          89 VKSYLDY   95 (98)
Q Consensus        89 L~VG~~~   95 (98)
                      |+||+++
T Consensus       241 L~vGn~g  247 (386)
T PLN02808        241 LEVGNGG  247 (386)
T ss_pred             eeECCCC
Confidence            9999864

>PLN03231 putative alpha-galactosidase; Provisional

Probab=99.87  E-value=3e-23  Score=163.79  Aligned_cols=81  Identities=19%  Similarity=0.191  Sum_probs=60.4

Q ss_pred             eecccccCcceEEEcCCCccccccCCCcC-hhhhhcccceeeecCCCcccHHHHHHHHHhhcccc----CcccCCCCCCC
Q psy1878           8 KTICPVAIGQLTYQVDLIGYTCQAYLIPN-FTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQ----DTIVPNAGPGH   82 (98)
Q Consensus         8 ~~~~~~~~RpIvySCsWg~~~~~~~~~~~-w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~----~~~~~~agPG~   82 (98)
                      ...+..+||||||||++|...+     +. +.|+.++|||||+++||+|+|++|.++++...+..    ...+.++||||
T Consensus       200 ~~AL~~tGRpIv~Slc~g~~~~-----~~~~~~i~~~an~WR~s~DI~d~W~~v~~~~~~~~~~~~~~~~~~~~~agpG~  274 (357)
T PLN03231        200 SKAIRNSGRPMIYSLSPGDGAT-----PGLAARVAQLVNMYRVTGDDWDDWKYLVKHFDVARDFAAAGLIAIPSVVGGKS  274 (357)
T ss_pred             HHHHHHhCCCeEEEecCCCCCC-----chhhhhhhhhcCcccccCCcccchhhHHHHHHHHHHHhhhcccccccCCCCCC
Confidence            3456778999999944454431     22 24556779999999999999999999987642211    22346899999


Q ss_pred             CCCcccccccC
Q psy1878          83 WNDPDMVKSYL   93 (98)
Q Consensus        83 wNDpDML~VG~   93 (98)
                      |||||||+||+
T Consensus       275 WnD~DML~vG~  285 (357)
T PLN03231        275 WVDLDMLPFGR  285 (357)
T ss_pred             CCCccchhcCC
Confidence            99999999995

>PLN02899 alpha-galactosidase

Probab=99.76  E-value=2.3e-19  Score=149.23  Aligned_cols=81  Identities=15%  Similarity=0.217  Sum_probs=57.0

Q ss_pred             eecccccCcceEEEcCCCccccccCCCcCh-hhhhcccceeeecCCCcccHHHHHHHHHhhccc-cCcccCCC--CCCCC
Q psy1878           8 KTICPVAIGQLTYQVDLIGYTCQAYLIPNF-TSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNN-QDTIVPNA--GPGHW   83 (98)
Q Consensus         8 ~~~~~~~~RpIvySCsWg~~~~~~~~~~~w-~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~-~~~~~~~a--gPG~w   83 (98)
                      ...++.+||||+|||++|...+     +.| .|+.++|||||+++||+|+|.+|..+++...+. ......++  +||||
T Consensus       231 s~AL~aTGRPIvySLspG~~~~-----p~wa~~v~~~aNmWRitgDI~D~W~sV~~~~d~~~~~~~~~~~g~~G~~gg~W  305 (633)
T PLN02899        231 SEVLKELDRPIVYSLSPGTSAT-----PTMAKEVSGLVNMYRITGDDWDTWGDVAAHFDVSRDFAAAGLIGAKGLRGRSW  305 (633)
T ss_pred             HHHHHHhCCCeEEEecCCcccc-----hhhhhhhhccCccceecCCcccchHHHHHHHHHHHHHhhccccccCCCCCCCC
Confidence            3456778999999944555541     222 344567999999999999999999998853221 11222233  35699


Q ss_pred             CCcccccccC
Q psy1878          84 NDPDMVKSYL   93 (98)
Q Consensus        84 NDpDML~VG~   93 (98)
                      ||||||+||.
T Consensus       306 NDpDML~VG~  315 (633)
T PLN02899        306 PDLDMLPLGW  315 (633)
T ss_pred             CCcceecccC
Confidence            9999999994

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	98
1ktb_A	405	The Structure Of Alpha-N-Acetylgalactosaminidase Le		4e-17
3hg3_A	404	Human Alpha-Galactosidase Catalytic Mechanism 2. Su		3e-15
1r46_A	398	Structure Of Human Alpha-galactosidase Length = 398		3e-15
3lx9_A	404	Interconversion Of Human Lysosomal Enzyme Specifici		3e-15
3h53_A	400	Crystal Structure Of Human Alpha-N-Acetylgalactosam		3e-14
1uas_A	362	Crystal Structure Of Rice Alpha-Galactosidase Lengt		7e-05

>pdb|1KTB|A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase Length = 405

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 7/72 (9%)
Query: 25  IGYTC-----QAYLIP--NFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPN 77
           I Y+C     Q  L P  N+T + E CNLWRN+DDIQDSW S+ SI+D++  NQD + P 
Sbjct: 167 IVYSCSWPAYQGGLPPKVNYTLLGEICNLWRNYDDIQDSWDSVLSIVDWFFTNQDVLQPF 226
Query: 78  AGPGHWNDPDMV 89
           AGPGHWNDPDM+
Sbjct: 227 AGPGHWNDPDML 238

>pdb|3HG3|A Chain A, Human Alpha-Galactosidase Catalytic Mechanism 2. Substrate Bound Length = 404

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 6/71 (8%)
Query: 25  IGYTCQ------AYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNA 78
           I Y+C+       +  PN+T I ++CN WRNF DI DSW+S++SI+D+   NQ+ IV  A
Sbjct: 167 IVYSCEWPLYMWPFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVA 226
Query: 79  GPGHWNDPDMV 89
           GPG WNDPDM+
Sbjct: 227 GPGGWNDPDML 237

>pdb|1R46|A Chain A, Structure Of Human Alpha-galactosidase Length = 398

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 6/71 (8%)
Query: 25  IGYTCQ------AYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNA 78
           I Y+C+       +  PN+T I ++CN WRNF DI DSW+S++SI+D+   NQ+ IV  A
Sbjct: 167 IVYSCEWPLYMWPFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVA 226
Query: 79  GPGHWNDPDMV 89
           GPG WNDPDM+
Sbjct: 227 GPGGWNDPDML 237

>pdb|3LX9|A Chain A, Interconversion Of Human Lysosomal Enzyme Specificities Length = 404

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 33/55 (60%), Positives = 43/55 (78%)
Query: 35  PNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV 89
           PN+T I ++CN WRNF DI DSW+S++SI+D+   NQ+ IV  AGPG WNDPDM+
Sbjct: 183 PNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDML 237

>pdb|3H53|A Chain A, Crystal Structure Of Human Alpha-N-Acetylgalactosaminidase Length = 400

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 30/53 (56%), Positives = 43/53 (81%)
Query: 37  FTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV 89
           ++ + + CNLWRN+DDIQDSW S+ SI++++  +QD + P AGPGHWNDPDM+
Sbjct: 185 YSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQPVAGPGHWNDPDML 237

>pdb|1UAS|A Chain A, Crystal Structure Of Rice Alpha-Galactosidase Length = 362

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 45  NLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVK 90
           N WR   DI D+W S+ S  D      D     AGPG WNDPDM++
Sbjct: 178 NSWRTTGDIADNWGSMTSRAD----ENDQWAAYAGPGGWNDPDMLE 219

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	98
1ktb_A	405	Alpha-N-acetylgalactosaminidase; glycoprotein, (be	7e-14
3a21_A	614	Putative secreted alpha-galactosidase; beta-alpha-	2e-13
3hg3_A	404	Alpha-galactosidase A; glycoprotein, carbohydrate-	1e-12
1szn_A	417	Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma	2e-10
1uas_A	362	Alpha-galactosidase; TIM-barrel, beta-alpha-barrel	2e-09
3lrk_A	479	Alpha-galactosidase 1; tetramer, GH27, glycoprotei	3e-09
3cc1_A	433	BH1870 protein, putative alpha-N-acetylgalactosami	2e-08
3a5v_A	397	Alpha-galactosidase; beta/alpha barrel, N-glycosyl	3e-06

>1ktb_A Alpha-N-acetylgalactosaminidase; glycoprotein, (beta/alpha)8 barrel, hydrolase; HET: NAG; 1.90A {Gallus gallus} SCOP: b.71.1.1 c.1.8.1 PDB: 1ktc_A* 3h55_A* 3h54_A* 3h53_A* 3igu_A* Length = 405

 Score = 64.5 bits (156), Expect = 7e-14
 Identities = 35/55 (63%), Positives = 44/55 (80%)

Query: 35  PNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV 89
            N+T + E CNLWRN+DDIQDSW S+ SI+D++  NQD + P AGPGHWNDPDM+
Sbjct: 184 VNYTLLGEICNLWRNYDDIQDSWDSVLSIVDWFFTNQDVLQPFAGPGHWNDPDML 238

>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Length = 614

 Score = 63.3 bits (153), Expect = 2e-13
 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 4/62 (6%)

Query: 29  CQAYLIPNFTSIIEHCNLWRNFDDI--QDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDP 86
           C       +        LWR   DI    +  S+ S++  +  +Q         G++NDP
Sbjct: 180 CNWGYQNPWNWAAGQAPLWRTSTDIIYYGNQPSMTSLLSNF--DQTLHPTAQHTGYYNDP 237

Query: 87  DM 88
           DM
Sbjct: 238 DM 239

>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A* Length = 404

 Score = 60.6 bits (146), Expect = 1e-12
 Identities = 33/55 (60%), Positives = 43/55 (78%)

Query: 35  PNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV 89
           PN+T I ++CN WRNF DI DSW+S++SI+D+   NQ+ IV  AGPG WNDPDM+
Sbjct: 183 PNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDML 237

>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Length = 417

 Score = 54.8 bits (131), Expect = 2e-10
 Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 4/67 (5%)

Query: 23  DLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGH 82
           +++   C       F+        WR  DDI  +W S+  I++         + +     
Sbjct: 197 EIVLSMCIWGQADVFSWGNSTGISWRMSDDISPNWGSVTRILNL----NSFKLNSVDFWG 252

Query: 83  WNDPDMV 89
            ND DM+
Sbjct: 253 HNDADML 259

>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Length = 362

 Score = 51.7 bits (123), Expect = 2e-09
 Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 4/66 (6%)

Query: 23  DLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGH 82
           ++    C+       T      N WR   DI D+W S+ S      +  D     AGPG 
Sbjct: 156 NIFFSLCEWGKENPATWAGRMGNSWRTTGDIADNWGSMTSRA----DENDQWAAYAGPGG 211

Query: 83  WNDPDM 88
           WNDPDM
Sbjct: 212 WNDPDM 217

>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A* Length = 479

 Score = 51.4 bits (122), Expect = 3e-09
 Identities = 16/79 (20%), Positives = 21/79 (26%), Gaps = 18/79 (22%)

Query: 29  CQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPN----------- 77
           C       F       N WR   D+   +   +S     G+  D                
Sbjct: 186 CNWGQDLTFYWGSGIANSWRMSGDVTAEFTRPDSRCPCDGDEYDCKYAGFHCSIMNILNK 245

Query: 78  -------AGPGHWNDPDMV 89
                  AG G WND D +
Sbjct: 246 AAPMGQNAGVGGWNDLDNL 264

>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Length = 433

 Score = 49.0 bits (116), Expect = 2e-08
 Identities = 15/58 (25%), Positives = 20/58 (34%), Gaps = 4/58 (6%)

Query: 31  AYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDM 88
              I        + N+WR  DD  D W  L  +        +    + G GHW D  M
Sbjct: 221 PAPIKYAHHFKTNANMWRITDDFWDDWSLLYQMF----ERCEVWEKHIGTGHWPDCGM 274

>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Length = 397

 Score = 42.9 bits (100), Expect = 3e-06
 Identities = 14/79 (17%), Positives = 21/79 (26%), Gaps = 16/79 (20%)

Query: 27  YTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYG----------------NN 70
             C       +       N WR   D+ D++   +                       N 
Sbjct: 164 SLCNWGEDGPWNFASTISNSWRISGDVYDNFNRPDPACPCTTYDCVLAGFRCSVMNIINK 223

Query: 71  QDTIVPNAGPGHWNDPDMV 89
              +   A  G WND DM+
Sbjct: 224 AVAVSQKARSGGWNDLDML 242

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	98
3hg3_A	404	Alpha-galactosidase A; glycoprotein, carbohydrate-	99.92
3lrk_A	479	Alpha-galactosidase 1; tetramer, GH27, glycoprotei	99.9
1szn_A	417	Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma	99.73
3a5v_A	397	Alpha-galactosidase; beta/alpha barrel, N-glycosyl	99.73
1uas_A	362	Alpha-galactosidase; TIM-barrel, beta-alpha-barrel	99.69
3cc1_A	433	BH1870 protein, putative alpha-N-acetylgalactosami	99.68
4do4_A	400	Alpha-N-acetylgalactosaminidase; pharmacological c	99.58
3a21_A	614	Putative secreted alpha-galactosidase; beta-alpha-	99.54
1zy9_A	564	Alpha-galactosidase; TM1192, struc genomics, joint	98.95
2xn2_A	732	Alpha-galactosidase; hydrolase, glycosidase; HET:	96.24
4fnq_A	729	Alpha-galactosidase AGAB; glycoside hydrolase, hyd	93.36

>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*

Probab=99.92  E-value=1.5e-26  Score=183.60  Aligned_cols=85  Identities=41%  Similarity=0.659  Sum_probs=71.7

Q ss_pred             cccccCcceEEEcCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCcccc
Q psy1878          10 ICPVAIGQLTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV   89 (98)
Q Consensus        10 ~~~~~~RpIvySCsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDML   89 (98)
                      .+..+||||+|||+||.+.... ..|+|++++++|||||+++||+++|+++.++++.+...++.+++|+|||+|||||||
T Consensus       159 AL~~tGRpi~~sc~w~~~~~~~-~~~~~~~~~~~~n~WR~~~Di~d~W~sv~~i~~~~~~~~~~~~~~agpG~wnDpDML  237 (404)
T 3hg3_A          159 ALNRTGRSIVYSCEWPLYMWPF-QKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDML  237 (404)
T ss_dssp             HHHHTTCCCEEEECTGGGGTTT-SCCCHHHHHHHCSEEECSCCCCSSHHHHHHHHHHHHHTHHHHTTTCBTTBEEECCCB
T ss_pred             HHHhcCCCEEEEeCCCcccccc-cccchHHHhhhCcEEEecCCcCcchHHHHHHHHHHhhhhhhhHhhcCCCCcCCCcce
Confidence            3467899999999998754111 135788889999999999999999999999998755456789999999999999999


Q ss_pred             cccCCC
Q psy1878          90 KSYLDY   95 (98)
Q Consensus        90 ~VG~~~   95 (98)
                      +||+.+
T Consensus       238 ~vGn~g  243 (404)
T 3hg3_A          238 VIGNFG  243 (404)
T ss_dssp             CTTSSS
T ss_pred             ecCCCC
Confidence            999864

>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*

Probab=99.90  E-value=6.6e-25  Score=177.29  Aligned_cols=75  Identities=21%  Similarity=0.253  Sum_probs=67.1

Q ss_pred             cccccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHH----------------------HHHHHHHh
Q psy1878          10 ICPVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQ----------------------SLESIIDY   66 (98)
Q Consensus        10 ~~~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~----------------------sv~~~~d~   66 (98)
                      .+..+||||+|| |+||...      + |.|++++|||||+++||+++|+                      +|..+++.
T Consensus       173 AL~~tGRpI~~Slc~Wg~~~------~-~~w~~~~~n~WR~s~DI~d~W~~~~~~~~~~~~~~~~~~~g~~~sv~~i~~~  245 (479)
T 3lrk_A          173 ALNKTGRPVFYSLCNWGQDL------T-FYWGSGIANSWRMSGDVTAEFTRPDSRCPCDGDEYDCKYAGFHCSIMNILNK  245 (479)
T ss_dssp             HHHHHCSCCEEEECSTTTTT------H-HHHSTTTCSEEECSSCBCSCSSCCCTTSCSCTTCSSCSCCCSCBCHHHHHHH
T ss_pred             HHHHhCCCeEEEeccCccCc------h-hhhhhhhCCeeeecCCccccccccccccccccccccccccccchhHHHHHHH
Confidence            346789999999 9999875      4 8999999999999999999997                      68888885


Q ss_pred             hccccCcccCCCCCCCCCCcccccccCCC
Q psy1878          67 YGNNQDTIVPNAGPGHWNDPDMVKSYLDY   95 (98)
Q Consensus        67 ~~~~~~~~~~~agPG~wNDpDML~VG~~~   95 (98)
                          ++.++.+++||+|||||||+||+++
T Consensus       246 ----~~~~~~~agpG~wNDpDML~vGn~g  270 (479)
T 3lrk_A          246 ----AAPMGQNAGVGGWNDLDNLEVGVGN  270 (479)
T ss_dssp             ----HGGGGGGCBTTBEEECCSBCTTSTT
T ss_pred             ----hhhhhhccCCCCCCCCCeEeeCCCC
Confidence                6789999999999999999999864

>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*

Probab=99.73  E-value=1.1e-18  Score=138.15  Aligned_cols=74  Identities=18%  Similarity=0.134  Sum_probs=65.8

Q ss_pred             ccccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCcccc
Q psy1878          11 CPVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV   89 (98)
Q Consensus        11 ~~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDML   89 (98)
                      +...+|||+|| |+||...      + +.|+.+++|+||+++||.|.|+++.++++.    +..+.++++||+|||||||
T Consensus       191 L~~~~~~i~~~~C~~G~~~------~-~~w~~~~~n~wR~s~D~~d~w~~~~~i~~~----~~~~~~~~~~g~~~D~DmL  259 (417)
T 1szn_A          191 LAKQSHEIVLSMCIWGQAD------V-FSWGNSTGISWRMSDDISPNWGSVTRILNL----NSFKLNSVDFWGHNDADML  259 (417)
T ss_dssp             HHTSSSCCEEEECCTTGGG------H-HHHGGGTCSEEECSSCCCSSHHHHHHHHHH----HHTCGGGCBTTBEEECCSC
T ss_pred             HHHhCCCEEEEeCCCCCCc------c-hhhHhhcccceeecCCccccHHHHHHHHHH----HhhhcccccCccccCCccc
Confidence            34678999999 9999875      4 788999999999999999999999999874    5688899999999999999


Q ss_pred             cccCCC
Q psy1878          90 KSYLDY   95 (98)
Q Consensus        90 ~VG~~~   95 (98)
                      +||+++
T Consensus       260 ~vg~~~  265 (417)
T 1szn_A          260 EVGNGN  265 (417)
T ss_dssp             CTTCTT
T ss_pred             ccCCCC
Confidence            999764

>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}

Probab=99.73  E-value=3.7e-19  Score=139.76  Aligned_cols=73  Identities=23%  Similarity=0.312  Sum_probs=64.5

Q ss_pred             cccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHH--------------------HHHHHHHhhccc
Q psy1878          12 PVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQ--------------------SLESIIDYYGNN   70 (98)
Q Consensus        12 ~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~--------------------sv~~~~d~~~~~   70 (98)
                      ..++|||+|| |+||...      + +.|+++++|+||+++||.++|+                    ++.++++.    
T Consensus       155 ~~~~~~i~~~~c~~G~~~------~-~~w~~~~~n~wR~s~Di~~~w~~~~~~~~~~~~~~~~~~~~~s~~~~~~~----  223 (397)
T 3a5v_A          155 NKTGRPMLYSLCNWGEDG------P-WNFASTISNSWRISGDVYDNFNRPDPACPCTTYDCVLAGFRCSVMNIINK----  223 (397)
T ss_dssp             HHTCSCCEEEECSTTTTC------H-HHHSTTTCSEEECSSCBCSCSSCCCTTSCCCSSCCSCCCSCBCHHHHHHH----
T ss_pred             HhhCCCcEEEeccCCCCc------h-hhHHhhcCcEEEEcCCcCCccccccccccccccccccccccchHHHHHHH----
Confidence            4568999999 9999865      3 7889999999999999999998                    68888874    


Q ss_pred             cCcccCCCCCCCCCCcccccccCCC
Q psy1878          71 QDTIVPNAGPGHWNDPDMVKSYLDY   95 (98)
Q Consensus        71 ~~~~~~~agPG~wNDpDML~VG~~~   95 (98)
                      +..+..+++||+|||||||+||++.
T Consensus       224 ~~~~~~~~~pg~~nD~Dml~vg~~~  248 (397)
T 3a5v_A          224 AVAVSQKARSGGWNDLDMLEVGNGG  248 (397)
T ss_dssp             HHHHGGGCBTTBEEECCCBCTTSSS
T ss_pred             hhhhHhhcCCCccCCccccccCCCC
Confidence            5688999999999999999999754

>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1

Probab=99.69  E-value=8.5e-18  Score=129.90  Aligned_cols=73  Identities=32%  Similarity=0.438  Sum_probs=65.0

Q ss_pred             cccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCccccc
Q psy1878          12 PVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVK   90 (98)
Q Consensus        12 ~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDML~   90 (98)
                      ...+|+|+|| |+||.+.      | +.|..+++|+||+++|+.++|+++..+++.    ++.+..+++||+|||||||+
T Consensus       151 ~~~~~~i~~~~c~~g~~~------p-~~w~~~~~n~~R~~~D~~~~w~~~~~~~~~----~~~~~~~~~pg~~~D~Dml~  219 (362)
T 1uas_A          151 KTYGKNIFFSLCEWGKEN------P-ATWAGRMGNSWRTTGDIADNWGSMTSRADE----NDQWAAYAGPGGWNDPDMLE  219 (362)
T ss_dssp             HHHCTTSEEEEESTTTTC------G-GGTGGGTCSEEECSSCCCSSHHHHHHHHHH----HHTTGGGCBTTBEEECCCCC
T ss_pred             HhhCCCcEEEecCCCCCC------h-HHHHhhheeEEEecCCCCcCchhHHHHHHH----HHHHHHhcCCCcccCcchhe
Confidence            4568999999 9999876      4 788899999999999999999999999874    56888999999999999999


Q ss_pred             ccCCC
Q psy1878          91 SYLDY   95 (98)
Q Consensus        91 VG~~~   95 (98)
                      ||+.+
T Consensus       220 vg~~~  224 (362)
T 1uas_A          220 VGNGG  224 (362)
T ss_dssp             TTSSS
T ss_pred             eCCCC
Confidence            99754

>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}

Probab=99.68  E-value=6.9e-18  Score=133.70  Aligned_cols=73  Identities=19%  Similarity=0.276  Sum_probs=60.2

Q ss_pred             ccccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCcccc
Q psy1878          11 CPVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV   89 (98)
Q Consensus        11 ~~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDML   89 (98)
                      +..++|||+|| |..+...      ..+.|+.+++|+||+++||+++|+++.++++.    ++.++.+++||+|||||||
T Consensus       206 L~~~gr~i~~slc~g~~~~------~~~~~~~~~~n~wR~s~D~~~~w~~~~~~~~~----~~~~~~~~~~g~~nD~Dml  275 (433)
T 3cc1_A          206 IQACGRPMVLSLSPGPAPI------KYAHHFKTNANMWRITDDFWDDWSLLYQMFER----CEVWEKHIGTGHWPDCGML  275 (433)
T ss_dssp             HHHSSSCCEEECCCSBSSE------ESCSSSCCTTGGGCCEECCCSCHHHHHHHHHH----HHHHHHSCCCSCCCBCCCB
T ss_pred             HHhcCCCEEEEecCCCCCh------hhhhhhhhhCcEEEeccCccccHHHHHHHHHH----HHHHHhhcCCCccCChHHh
Confidence            34679999999 5532221      12557789999999999999999999999985    4578899999999999999


Q ss_pred             cccC
Q psy1878          90 KSYL   93 (98)
Q Consensus        90 ~VG~   93 (98)
                      +||.
T Consensus       276 ~vg~  279 (433)
T 3cc1_A          276 PLGH  279 (433)
T ss_dssp             CCSE
T ss_pred             cccC
Confidence            9995

>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*

Probab=99.58  E-value=4.6e-16  Score=119.92  Aligned_cols=87  Identities=36%  Similarity=0.622  Sum_probs=71.0

Q ss_pred             cccccCcceEEEcCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCcccc
Q psy1878          10 ICPVAIGQLTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV   89 (98)
Q Consensus        10 ~~~~~~RpIvySCsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDML   89 (98)
                      .+...+|||+|||+|+.+.........+.|..+++|+||+++||.+.|.++..+.+.....+..+..+++||+|||||||
T Consensus       158 ~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~Di~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~d~d~l  237 (400)
T 4do4_A          158 ALNATGRPIAFSCSWPAYEGGLPPRVQYSLLADICNLWRNYDDIQDSWWSVLSILNWFVEHQDILQPVAGPGHWNDPDML  237 (400)
T ss_dssp             HHHHTCSCCEEEECGGGGTTSSTTTCCHHHHHHHCSEEECSCCCCSSHHHHHHHHHHHHHTHHHHGGGCBTTBEEECCCC
T ss_pred             HHHHhCccceecccccccccccccccchhhcccccccccccCcccCcccchhhHHHHHHHHhHHhhhhcCCCCCCCCccc
Confidence            45678999999988776553323334588889999999999999999999998877654456778899999999999999


Q ss_pred             cccCCCC
Q psy1878          90 KSYLDYD   96 (98)
Q Consensus        90 ~VG~~~~   96 (98)
                      ++|+...
T Consensus       238 ~~~~~~~  244 (400)
T 4do4_A          238 LIGNFGL  244 (400)
T ss_dssp             CTTSSSC
T ss_pred             cccCCCC
Confidence            9998653

>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*

Probab=99.54  E-value=3.1e-15  Score=122.39  Aligned_cols=70  Identities=23%  Similarity=0.282  Sum_probs=57.5

Q ss_pred             cccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccH-------HHHHHHHHhhccccCcccCCCCCCCC
Q psy1878          12 PVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSW-------QSLESIIDYYGNNQDTIVPNAGPGHW   83 (98)
Q Consensus        12 ~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W-------~sv~~~~d~~~~~~~~~~~~agPG~w   83 (98)
                      ..++|||+|| |+||...      + +.|+.+++|+||+++||. .|       ..+..+++.    +..+.  ++||+|
T Consensus       169 ~~~gr~i~~s~c~~g~~~------~-~~~~~~~~~~wR~~~Di~-~~~~~~~~~~~~~~~~~~----~~~~~--~~pg~~  234 (614)
T 3a21_A          169 ATTGRPLTLSICNWGYQN------P-WNWAAGQAPLWRTSTDII-YYGNQPSMTSLLSNFDQT----LHPTA--QHTGYY  234 (614)
T ss_dssp             HHHSCCCEEEECCTTTTC------G-GGTCTTTCSEEECSSCSC-CTTSCCCHHHHHHHHHHH----CCTTT--CBTTBE
T ss_pred             HhcCCCeEEEecCCccCC------h-hhhhhccCcccccccccc-cccccCchHHHHHHHHHh----hhHHh--hCCCcc
Confidence            5569999999 9999876      3 778889999999999999 55       566666653    44555  899999


Q ss_pred             CCcccccccCCC
Q psy1878          84 NDPDMVKSYLDY   95 (98)
Q Consensus        84 NDpDML~VG~~~   95 (98)
                      ||||||+||++.
T Consensus       235 nD~Dml~~g~~~  246 (614)
T 3a21_A          235 NDPDMLMVGMDG  246 (614)
T ss_dssp             EECCSCCTTCTT
T ss_pred             cCCCeeeeCCCC
Confidence            999999999754

>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13

Probab=98.95  E-value=5.2e-11  Score=97.35  Aligned_cols=72  Identities=13%  Similarity=-0.039  Sum_probs=51.8

Q ss_pred             eeecccccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHH---------HHHhhccccCcccC
Q psy1878           7 FKTICPVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLES---------IIDYYGNNQDTIVP   76 (98)
Q Consensus         7 ~~~~~~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~---------~~d~~~~~~~~~~~   76 (98)
                      ++.|.+..+|+|+++ |+||...           ..+.+|+||+++||.+.|.++..         .+..   ....+..
T Consensus       364 l~~l~~~~pr~i~i~~C~~g~~~-----------s~~~~n~~Ris~Di~~~W~s~~~~~~~p~~~~~~~n---~~~~~~~  429 (564)
T 1zy9_A          364 IETIRKAVGEDSFILGCGSPLLP-----------AVGCVDGMRIGPDTAPFWGEHIEDNGAPAARWALRN---AITRYFM  429 (564)
T ss_dssp             HHHHHHHHCTTSEEEECSCBSGG-----------GTTTCSEEECSSCCCSSCCTTSCSSSSSCHHHHHHH---HHHTGGG
T ss_pred             HHHHHhhCCCCeEEEecCCcccc-----------cccccceEEEcCCccccccccccccccHHHHHHHHH---HHHHHhh
Confidence            345667778789998 9998532           15789999999999998887531         1111   1234555


Q ss_pred             CCCCCCCCCcccccccC
Q psy1878          77 NAGPGHWNDPDMVKSYL   93 (98)
Q Consensus        77 ~agPG~wNDpDML~VG~   93 (98)
                      +++| +|||||||+||.
T Consensus       430 ~~~~-~~nDPDml~vg~  445 (564)
T 1zy9_A          430 HDRF-WLNDPDCLILRE  445 (564)
T ss_dssp             BTTT-BEEECCCBCCCS
T ss_pred             ccCC-cccCCCEeEecC
Confidence            6677 799999999997

>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*

Probab=96.24  E-value=0.0029  Score=53.05  Aligned_cols=66  Identities=12%  Similarity=0.063  Sum_probs=48.2

Q ss_pred             cccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCccccc
Q psy1878          12 PVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVK   90 (98)
Q Consensus        12 ~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDML~   90 (98)
                      ...+++|+|+ |+||...      .++.......+.|+  +|+.+.|+++. +..       . ..+.-|+.+++++|+.
T Consensus       519 ~~~~p~i~~~~C~~Gg~r------~d~g~l~~~~~~W~--sD~~d~~~r~~-i~~-------g-~s~~~P~~~~~~~~~~  581 (732)
T 2xn2_A          519 VTRYPDILFEGCSGGGGR------FDVGQAYYTPQIWA--SDNTDAIERLK-IQY-------G-TSLVYPQSMMTSHVSV  581 (732)
T ss_dssp             HHHCTTSEEEECBTBBTT------CSHHHHTTCSEEEC--BSCCCHHHHHH-HHH-------H-HTTTSCGGGEEEEEEC
T ss_pred             HHhCCCcEEEEecCcccc------cCchhhcccceEEC--CCCcCHHHHHH-Hhc-------c-hhhcCCcccCCCCEEe
Confidence            3457899999 9998754      34555556678886  69999998762 211       1 1356799999999999


Q ss_pred             ccCC
Q psy1878          91 SYLD   94 (98)
Q Consensus        91 VG~~   94 (98)
                      +|++
T Consensus       582 ~pn~  585 (732)
T 2xn2_A          582 SPNE  585 (732)
T ss_dssp             SSCT
T ss_pred             eCCC
Confidence            9976

>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*

Probab=93.36  E-value=0.06  Score=44.96  Aligned_cols=69  Identities=6%  Similarity=-0.106  Sum_probs=45.8

Q ss_pred             cCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCccccccc
Q psy1878          14 AIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMVKSY   92 (98)
Q Consensus        14 ~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDML~VG   92 (98)
                      ..++|+|+ |+||...      . +.+....++.+++++|..+.+. +.-..      ...+.-.+++++++++||+..+
T Consensus       517 ~~P~i~ie~C~~Gg~r------~-d~~~l~~~~~~w~SD~~d~~~r-~~i~~------g~s~~~p~~~~g~hv~~~~~~~  582 (729)
T 4fnq_A          517 RFPHILFESCSGGGGR------F-DPGMLYYMPQTWTSDNTDAVSR-LKIQY------GTSLVYPISAMGAHVSAVPNHQ  582 (729)
T ss_dssp             HCTTCEEEEEBTBBTT------C-SHHHHTTSSEEECBSCCCHHHH-HHHHH------HHTTTSCGGGEEEEEECSSCSS
T ss_pred             HCCCcEEEcccCCCCC------c-cchhhhcccceeecCCcchHHH-HHHHh------chhcccCchhcccCccCCcccC
Confidence            45799999 9999865      3 3345566777777877654432 22111      1234445778899999999988


Q ss_pred             CCCC
Q psy1878          93 LDYD   96 (98)
Q Consensus        93 ~~~~   96 (98)
                      .++.
T Consensus       583 ~gr~  586 (729)
T 4fnq_A          583 VGRV  586 (729)
T ss_dssp             SCCC
T ss_pred             CcCc
Confidence            7664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	98
d1ktba2	293	c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallu	2e-10
d1r46a2	292	c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens)	3e-10
d1zy9a2	348	c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata	7e-08
d1szna2	314	c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [T	6e-07
d1uasa2	273	c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [	3e-05

>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 293

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 53.3 bits (127), Expect = 2e-10
 Identities = 35/54 (64%), Positives = 43/54 (79%)

Query: 35  PNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDM 88
            N+T + E CNLWRN+DDIQDSW S+ SI+D++  NQD + P AGPGHWNDPDM
Sbjct: 184 VNYTLLGEICNLWRNYDDIQDSWDSVLSIVDWFFTNQDVLQPFAGPGHWNDPDM 237

>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 3e-10
 Identities = 33/54 (61%), Positives = 42/54 (77%)

Query: 35  PNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDM 88
           PN+T I ++CN WRNF DI DSW+S++SI+D+   NQ+ IV  AGPG WNDPDM
Sbjct: 183 PNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDM 236

>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: YicI catalytic domain-like
domain: Alpha-galactosidase GalA catalytic domain
species: Thermotoga maritima [TaxId: 2336]

 Score = 46.3 bits (109), Expect = 7e-08
 Identities = 9/58 (15%), Positives = 13/58 (22%), Gaps = 5/58 (8%)

Query: 37  FTSIIEHCNLWRNFDDIQDSWQSLES-----IIDYYGNNQDTIVPNAGPGHWNDPDMV 89
               +   +  R   D    W             +   N  T          NDPD +
Sbjct: 195 LLPAVGCVDGMRIGPDTAPFWGEHIEDNGAPAARWALRNAITRYFMHDRFWLNDPDCL 252

>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 314

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Trichoderma reesei [TaxId: 51453]

 Score = 43.7 bits (102), Expect = 6e-07
 Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 4/67 (5%)

Query: 23  DLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGH 82
           +++   C       F+        WR  DDI  +W S+  I++         + +     
Sbjct: 197 EIVLSMCIWGQADVFSWGNSTGISWRMSDDISPNWGSVTRILNL----NSFKLNSVDFWG 252

Query: 83  WNDPDMV 89
            ND DM+
Sbjct: 253 HNDADML 259

>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 273

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Rice (Oryza sativa) [TaxId: 4530]

 Score = 38.6 bits (89), Expect = 3e-05
 Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 29  CQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDM 88
           C+       T      N WR   DI D+W S+ S  D      D     AGPG WNDPDM
Sbjct: 162 CEWGKENPATWAGRMGNSWRTTGDIADNWGSMTSRAD----ENDQWAAYAGPGGWNDPDM 217

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	98
d1ktba2	293	Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	99.45
d1r46a2	292	Melibiase {Human (Homo sapiens) [TaxId: 9606]}	99.37
d1uasa2	273	Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	99.36
d1szna2	314	Melibiase {Trichoderma reesei [TaxId: 51453]}	99.33
d1zy9a2	348	Alpha-galactosidase GalA catalytic domain {Thermot	98.69

>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.45  E-value=7.4e-15  Score=106.34  Aligned_cols=87  Identities=43%  Similarity=0.675  Sum_probs=70.6

Q ss_pred             ecccccCcceEEEcCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCccc
Q psy1878           9 TICPVAIGQLTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDM   88 (98)
Q Consensus         9 ~~~~~~~RpIvySCsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDM   88 (98)
                      .....++|+++++|+++...........+.+...++++||++.|+.+.|++...+++.+.+....+..+++||.||||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~D~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Dm  237 (293)
T d1ktba2         158 RALNATGRPIVYSCSWPAYQGGLPPKVNYTLLGEICNLWRNYDDIQDSWDSVLSIVDWFFTNQDVLQPFAGPGHWNDPDM  237 (293)
T ss_dssp             HHHHHTTSCCEEEECHHHHTTSSTTTCCHHHHHHHCSEEECSCCCCSSHHHHHHHHHHHHHTGGGTGGGCBTTBEEECCC
T ss_pred             HHHHHhCchHhhhcccccccccCCcccchhhhhhcchhhhccCCcccccccHHHHHHHHHHHhHHHHhhcCCCccCChHH
Confidence            34567899999999988654333333346777889999999999999999999888776656677888999999999999


Q ss_pred             ccccCCC
Q psy1878          89 VKSYLDY   95 (98)
Q Consensus        89 L~VG~~~   95 (98)
                      |++|...
T Consensus       238 l~~~~~~  244 (293)
T d1ktba2         238 LIIGNFG  244 (293)
T ss_dssp             BCTTSSS
T ss_pred             HhcCCCC
Confidence            9999764

>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=4.4e-14  Score=102.49  Aligned_cols=85  Identities=41%  Similarity=0.659  Sum_probs=66.9

Q ss_pred             cccccCcceEEEcCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCcccc
Q psy1878          10 ICPVAIGQLTYQVDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDMV   89 (98)
Q Consensus        10 ~~~~~~RpIvySCsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDML   89 (98)
                      .+...+|+++++|+++....... .+...+...++|+||++.||.+.|+++..+++.....+..+..+++|+.|||||||
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~R~s~D~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~DpDml  237 (292)
T d1r46a2         159 ALNRTGRSIVYSCEWPLYMWPFQ-KPNYTEIRQYCNHWRNFADIDDSWKSIKSILDWTSFNQERIVDVAGPGGWNDPDML  237 (292)
T ss_dssp             HHHHHCSCCEEEECHHHHHTTTS-CCCHHHHTTTCSEEECSCCCCSSHHHHHHHHHHHHTTTTTHHHHCBTTBEEECCCB
T ss_pred             HHHHhccceeeeecccccccccc-CcccccccccCceeeecCCcCCcchhHHHHHHHHHHHHHHHHHhcccCcCCCchhh
Confidence            35667899999999865432111 13366778899999999999999999998887655455667778999999999999


Q ss_pred             cccCCC
Q psy1878          90 KSYLDY   95 (98)
Q Consensus        90 ~VG~~~   95 (98)
                      ++|...
T Consensus       238 ~~g~~~  243 (292)
T d1r46a2         238 VIGNFG  243 (292)
T ss_dssp             CTTSSS
T ss_pred             ccCCCC
Confidence            999765

>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=99.36  E-value=1.2e-13  Score=100.28  Aligned_cols=75  Identities=31%  Similarity=0.419  Sum_probs=63.6

Q ss_pred             cccccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCccc
Q psy1878          10 ICPVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDM   88 (98)
Q Consensus        10 ~~~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDM   88 (98)
                      ....++||++++ |.+|...      + +.+...++|+||++.|+.+.|+++..+++.    +..++.+++||+||||||
T Consensus       149 ~l~~~~r~~~~~~~~~g~~~------~-~~~~~~~~~~~R~s~D~~~~w~~~~~~~~~----~~~~~~~~g~~~~~D~D~  217 (273)
T d1uasa2         149 AMKTYGKNIFFSLCEWGKEN------P-ATWAGRMGNSWRTTGDIADNWGSMTSRADE----NDQWAAYAGPGGWNDPDM  217 (273)
T ss_dssp             HHHHHCTTSEEEEESTTTTC------G-GGTGGGTCSEEECSSCCCSSHHHHHHHHHH----HHTTGGGCBTTBEEECCC
T ss_pred             HHHHhCCCcEEeecccCCCc------c-hhhhhhhhhhhcccCCcCcchhhHHHHHHH----HHHHHHHhCCCcccCccc
Confidence            345678999999 8888664      3 556788999999999999999999998875    567788999999999999


Q ss_pred             ccccCCC
Q psy1878          89 VKSYLDY   95 (98)
Q Consensus        89 L~VG~~~   95 (98)
                      +++|...
T Consensus       218 ~~~~~~~  224 (273)
T d1uasa2         218 LEVGNGG  224 (273)
T ss_dssp             CCTTSSS
T ss_pred             cccCCCC
Confidence            9999754

>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Trichoderma reesei [TaxId: 51453]

Probab=99.33  E-value=3.5e-13  Score=97.86  Aligned_cols=75  Identities=17%  Similarity=0.129  Sum_probs=63.8

Q ss_pred             cccccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHHHHHHHhhccccCcccCCCCCCCCCCccc
Q psy1878          10 ICPVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSLESIIDYYGNNQDTIVPNAGPGHWNDPDM   88 (98)
Q Consensus        10 ~~~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv~~~~d~~~~~~~~~~~~agPG~wNDpDM   88 (98)
                      .+...+++++++ |.|+...      + +.|...++|+||+++|+.+.|.++..+++.    +.....+++++.||||||
T Consensus       190 ~l~~~~~~~~i~~c~~~~~~------~-~~~~~~~~~~~R~s~D~~~~w~~~~~~~~~----~~~~~~~~~~~~~~DpDm  258 (314)
T d1szna2         190 ALAKQSHEIVLSMCIWGQAD------V-FSWGNSTGISWRMSDDISPNWGSVTRILNL----NSFKLNSVDFWGHNDADM  258 (314)
T ss_dssp             HHHTSSSCCEEEECCTTGGG------H-HHHGGGTCSEEECSSCCCSSHHHHHHHHHH----HHTCGGGCBTTBEEECCS
T ss_pred             HHHHhCCCeEEEecCCCCCC------c-hhhhhhcccceeecCCcccccchHHHHHHH----HHHHHHHhcCCccCCchh
Confidence            355678999999 9999875      3 667788999999999999999999888764    456778899999999999


Q ss_pred             ccccCCC
Q psy1878          89 VKSYLDY   95 (98)
Q Consensus        89 L~VG~~~   95 (98)
                      |.+|...
T Consensus       259 l~~g~~~  265 (314)
T d1szna2         259 LEVGNGN  265 (314)
T ss_dssp             CCTTCTT
T ss_pred             cccCCCC
Confidence            9998754

>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: YicI catalytic domain-like
domain: Alpha-galactosidase GalA catalytic domain
species: Thermotoga maritima [TaxId: 2336]

Probab=98.69  E-value=1.2e-09  Score=81.25  Aligned_cols=70  Identities=14%  Similarity=-0.072  Sum_probs=48.0

Q ss_pred             eecccccCcceEEE-cCCCccccccCCCcChhhhhcccceeeecCCCcccHHHH---------HHHHHhhccccCcccCC
Q psy1878           8 KTICPVAIGQLTYQ-VDLIGYTCQAYLIPNFTSIIEHCNLWRNFDDIQDSWQSL---------ESIIDYYGNNQDTIVPN   77 (98)
Q Consensus         8 ~~~~~~~~RpIvyS-CsWg~~~~~~~~~~~w~w~~~~an~WR~s~DI~d~W~sv---------~~~~d~~~~~~~~~~~~   77 (98)
                      +.+.+..+++|+++ |..+..           +....+|+||++.||.+.|.+.         ...+..    .......
T Consensus       176 ~~~~~~~~~~~~~~~c~~p~~-----------~~~~~~~~~Ris~Di~~~w~~~~~d~~~~~~~~~~~~----~~~~~~~  240 (348)
T d1zy9a2         176 ETIRKAVGEDSFILGCGSPLL-----------PAVGCVDGMRIGPDTAPFWGEHIEDNGAPAARWALRN----AITRYFM  240 (348)
T ss_dssp             HHHHHHHCTTSEEEECSCBSG-----------GGTTTCSEEECSSCCCSSCCTTSCSSSSSCHHHHHHH----HHHTGGG
T ss_pred             HHHHhhhcCCeEEecCCCccc-----------chhccCCeEEECCCccccccccCCCCccHHHHHHHHh----hhhcccc
Confidence            44556678899998 976532           3456799999999999988642         111211    1122234


Q ss_pred             CCCCCCCCccccccc
Q psy1878          78 AGPGHWNDPDMVKSY   92 (98)
Q Consensus        78 agPG~wNDpDML~VG   92 (98)
                      .+||+|||||||.++
T Consensus       241 ~~~~~~nDpD~l~l~  255 (348)
T d1zy9a2         241 HDRFWLNDPDCLILR  255 (348)
T ss_dssp             BTTTBEEECCCBCCC
T ss_pred             CCCccccCccceeec
Confidence            789999999999875