Psyllid ID: psy1961

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------
Protein Sequence
MSEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHYVLRWATPQSIKETFVPLTEWKYPYMG
Secondary Structure (PSIPRED)
ccEEEEcccccccccEEEccEEEEEcccccccccccccccEEEEEEEccccHHHHHHHHHccccccccEEEEcccHHHHHHHHHHHHcccccEEEcccccccccccccccccccccccHHHHHHHHccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEcccccccEEEEccEEEEEcccccccHHHHHcccEEEEEEEccHHHHHHHHHHcccccHcHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccccccEEccccccccccccccHHHHHHHccHHHHHHcccccccccccccc
Coil and Loop (DISEMBL)
mseiigggqydescgyfiqptivqtkdplekimteeifgpvltifvypdkdldktlkivtdstpyaltgavfaedeSFQKRCLDDLKYAAGnyyindkstgsvvgqqpfggtndkaggphyvlrwatpqsiketfvpltewkypymg
Flexible Loop (DISEMBL)
mseiigggqydescgyfIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTgavfaedesfQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHYVLrwatpqsiketfvpltewkypymg
Low Complexity Region (SEG)
MSEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHYVLRWATPQSIKETFVPLTEWKYPYMG
Disordered region (IsUnstruct)
****IGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHYVLRWATPQSIKETFVPLTEWKYPY**
Disordered Region (DISOPRED)
MSEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHYVLRWATPQSIKETFVPLTEWKYPYMG
Disordered Region (DISEMBL)
MSEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHYVLRWATPQSIKETFVPLTEWKYPYMG
Disordered Region (DISPRO)
MSEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHYVLRWATPQSIKETFVPLTEWKYPYMG
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHYVLRWATPQSIKETFVPLTEWKYPYMG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	147	2.2.26 [Sep-21-2011]
A7YWE4	563	Delta-1-pyrroline-5-carbo	yes	N/A	0.972	0.253	0.614	2e-52
Q7SY23	556	Delta-1-pyrroline-5-carbo	yes	N/A	0.979	0.258	0.624	3e-52
Q8CHT0	562	Delta-1-pyrroline-5-carbo	yes	N/A	0.972	0.254	0.601	5e-50
P30038	563	Delta-1-pyrroline-5-carbo	yes	N/A	0.972	0.253	0.587	1e-47
Q54RA2	558	Delta-1-pyrroline-5-carbo	yes	N/A	0.986	0.259	0.56	6e-42
P0C2X9	563	Delta-1-pyrroline-5-carbo	yes	N/A	0.952	0.248	0.519	8e-39
O74766	548	Probable delta-1-pyrrolin	yes	N/A	0.965	0.259	0.462	7e-36
P07275	575	Delta-1-pyrroline-5-carbo	yes	N/A	0.965	0.246	0.469	1e-34
Q9P8I0	572	Delta-1-pyrroline-5-carbo	yes	N/A	0.965	0.248	0.46	3e-32
P78568	546	Delta-1-pyrroline-5-carbo	N/A	N/A	0.965	0.260	0.469	1e-31

>sp|A7YWE4|AL4A1_BOVIN Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH4A1 PE=2 SV=1

 Score =  204 bits (518), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 91/148 (61%), Positives = 115/148 (77%), Gaps = 5/148 (3%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           I+ GG  D+S GYF++P IV+TKDP + IM EEIFGPVL ++VYPD++  +TL++V  +T
Sbjct: 415 ILAGGHCDDSVGYFVEPCIVETKDPQDPIMKEEIFGPVLAVYVYPDEEYKETLRLVDSTT 474

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGG 118
            Y LTGAVFA+D+   +   + L++AAGN+YINDKSTGSVVGQQPFG     GTNDK GG
Sbjct: 475 SYGLTGAVFAQDKDVLREATELLRHAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGG 534

Query: 119 PHYVLRWATPQSIKETFVPLTEWKYPYM 146
           PHYVLRW +PQ IKET  PL +W+YPYM
Sbjct: 535 PHYVLRWTSPQVIKETHGPLGDWRYPYM 562

Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes.
Bos taurus (taxid: 9913)
EC: 1EC: .EC: 5EC: .EC: 1EC: .EC: 1EC: 2

>sp|Q7SY23|AL4A1_DANRE Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Danio rerio GN=aldh4a1 PE=2 SV=1

 Score =  203 bits (517), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 93/149 (62%), Positives = 116/149 (77%), Gaps = 5/149 (3%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           +II GG  D+  GYF++PTI++T DP EKIM EEIFGPVLT++VYP+ D  K L ++ ++
Sbjct: 407 KIIAGGNCDDKKGYFVEPTIIETTDPQEKIMNEEIFGPVLTVYVYPENDYKKVLHLIDNT 466

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAG 117
           +PYALTGA+F +D+S  +     L+ AAGNYYINDKSTGS+V QQPFG     GTNDK G
Sbjct: 467 SPYALTGAIFPQDKSVIEEAGKALRNAAGNYYINDKSTGSIVAQQPFGGARASGTNDKPG 526

Query: 118 GPHYVLRWATPQSIKETFVPLTEWKYPYM 146
           GPHYVLRW +PQ +K+T VPLTEWKYPYM
Sbjct: 527 GPHYVLRWTSPQVVKQTHVPLTEWKYPYM 555

Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q8CHT0|AL4A1_MOUSE Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh4a1 PE=1 SV=3

 Score =  196 bits (498), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 89/148 (60%), Positives = 113/148 (76%), Gaps = 5/148 (3%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           I+ GGQ +ES GY+++P I+++KDP E IM EEIFGPVLT++VYPD    +TL++V  +T
Sbjct: 414 ILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLQLVDSTT 473

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGG 118
            Y LTGAVFA+D++  +     L+ AAGN+YINDKSTGSVVGQQPFG     GTNDK GG
Sbjct: 474 SYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGG 533

Query: 119 PHYVLRWATPQSIKETFVPLTEWKYPYM 146
           PHY+LRW +PQ IKET  PL +W+Y YM
Sbjct: 534 PHYILRWTSPQVIKETHKPLGDWRYSYM 561

Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|P30038|AL4A1_HUMAN Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH4A1 PE=1 SV=3

 Score =  187 bits (476), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 87/148 (58%), Positives = 111/148 (75%), Gaps = 5/148 (3%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           I+ GG+ D+S GYF++P IV++KDP E IM EEIFGPVL+++VYPD    +TL++V  +T
Sbjct: 415 ILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTT 474

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGG 118
            Y LTGAVF++D+   +     L+ AAGN+YINDKSTGS+VGQQPFG     GTNDK GG
Sbjct: 475 SYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPGG 534

Query: 119 PHYVLRWATPQSIKETFVPLTEWKYPYM 146
           PHY+LRW +PQ IKET  PL +W Y YM
Sbjct: 535 PHYILRWTSPQVIKETHKPLGDWSYAYM 562

Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q54RA2|AL4A1_DICDI Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=DDB_G0283293 PE=3 SV=1

 Score =  169 bits (428), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 84/150 (56%), Positives = 107/150 (71%), Gaps = 5/150 (3%)

Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           +EII GG+ D S G+F++PTI+  KDP  K M EEIFGPVLTI+VY D   ++TLKI  +
Sbjct: 404 AEIIVGGKCDSSVGWFVEPTIILAKDPHYKSMEEEIFGPVLTIYVYEDSKFEETLKICDE 463

Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKA 116
           ++PYALTG++F+      +     LK AAGN+YINDK TG+VVGQQPFG     GTNDKA
Sbjct: 464 TSPYALTGSIFSTCRYAIETAHKYLKNAAGNFYINDKCTGAVVGQQPFGGSRASGTNDKA 523

Query: 117 GGPHYVLRWATPQSIKETFVPLTEWKYPYM 146
           G    +LRW + ++IKE FVPLT + YPYM
Sbjct: 524 GSSLNLLRWISARTIKENFVPLTSFTYPYM 553

Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles.

Dictyostelium discoideum (taxid: 44689)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|P0C2X9|AL4A1_RAT Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh4a1 PE=1 SV=1

 Score =  159 bits (401), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 79/152 (51%), Positives = 103/152 (67%), Gaps = 12/152 (7%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           I+ GGQ +ES GYF++P I+++KDP E IM EEIFGPVLT++VYPD+   +TL++V  +T
Sbjct: 414 ILAGGQCNESVGYFVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDEKYRETLQLVDSTT 473

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGT-----NDKAGG 118
            Y LTGAVFA+D++  +     L+ AAGN+YINDKSTGSVVGQQPFGG       D  G 
Sbjct: 474 SYGLTGAVFAQDKTIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGERDIPGQ 533

Query: 119 PHYVLRWA----TPQSIKETFVPLTEWKYPYM 146
           P  V  W     TP ++     PL +W+Y YM
Sbjct: 534 PRLVQLWTEPPFTPLAVSP---PLGDWRYSYM 562

Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|O74766|PUT2_SCHPO Probable delta-1-pyrroline-5-carboxylate dehydrogenase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC24C6.04 PE=1 SV=1

 Score =  149 bits (375), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 68/147 (46%), Positives = 101/147 (68%), Gaps = 5/147 (3%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           E++ GG+ D+S G+F++PT++ +K+P   I   E+FGPVL+++VY D +LD    ++  +
Sbjct: 399 EVLAGGKADDSEGFFVEPTVLLSKNPKHDIFVNELFGPVLSVYVYEDDNLDAVCDLIDTT 458

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAG 117
           TPY LTG++FA+D    ++  D L+ AAGN+YINDK TG+VVG+QPFG     GTNDKAG
Sbjct: 459 TPYGLTGSIFAQDRVVVRKLTDRLRNAAGNFYINDKCTGAVVGEQPFGGARASGTNDKAG 518

Query: 118 GPHYVLRWATPQSIKETFVPLTEWKYP 144
               + R+ +P+SIK+TF       YP
Sbjct: 519 SGMILSRFVSPRSIKDTFAYADSVLYP 545

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|P07275|PUT2_YEAST Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUT2 PE=1 SV=2

 Score =  145 bits (365), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 69/147 (46%), Positives = 104/147 (70%), Gaps = 5/147 (3%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           EI+ GGQYD+S G+F+ PT+++ K P    M+ E FGP+LT++ YPD + ++   I+ ++
Sbjct: 425 EILYGGQYDKSQGWFVGPTVIKAKRPDHPYMSTEFFGPILTVYEYPDTEFNEICDIIDNT 484

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAG 117
           + YALTGA+FA+D    +   + LK++AGN+YINDK TG+VV QQ FG     GT+DKAG
Sbjct: 485 SQYALTGAIFAKDRKAIEYADEKLKFSAGNFYINDKCTGAVVSQQWFGGARMSGTDDKAG 544

Query: 118 GPHYVLRWATPQSIKETFVPLTEWKYP 144
           GP+ + R+ + ++ KE F  LT++KYP
Sbjct: 545 GPNILSRFVSIRNTKENFYELTDFKYP 571

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q9P8I0|PUT2_EMENI Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=prnC PE=3 SV=2

 Score =  137 bits (344), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 69/150 (46%), Positives = 97/150 (64%), Gaps = 8/150 (5%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDK---DLDKTLKIV 59
           E++ GG YD S G++IQPT+ +T +P   ++T E+FGP+L ++ YPD    D  +  + +
Sbjct: 419 ELLAGGSYDSSKGWYIQPTVYRTTNPDHPLLTRELFGPILVVYAYPDATEADFARIAQKI 478

Query: 60  TDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTND 114
             +  Y LTG+VFA+D        D L+ AAGN+YIN KSTG+VVGQQPFG     GTND
Sbjct: 479 DATGEYGLTGSVFAQDREALAVANDVLRNAAGNFYINCKSTGAVVGQQPFGGARASGTND 538

Query: 115 KAGGPHYVLRWATPQSIKETFVPLTEWKYP 144
           KAG  + + R+ + +SIKE FVP  +  YP
Sbjct: 539 KAGSGNLLSRFVSLRSIKEEFVPTYKVAYP 568

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|P78568|PUT2_AGABI Delta-1-pyrroline-5-carboxylate dehydrogenase OS=Agaricus bisporus GN=pruA PE=3 SV=1

 Score =  135 bits (339), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/147 (46%), Positives = 95/147 (64%), Gaps = 5/147 (3%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           E++ GG  D+S G+FIQPT++ TK P    M  EIFGPV+T +V+ D D +KTL+++  +
Sbjct: 396 EVLIGGSGDDSKGFFIQPTVILTKVPRSTTMVGEIFGPVVTAYVFEDSDYEKTLELIDTT 455

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAG 117
           + Y LTGA+FA +        +  + AAGN Y N+K TG+VVGQQPFG     GTNDKAG
Sbjct: 456 SIYGLTGAIFASERQALLTATNRSRNAAGNIYYNEKCTGAVVGQQPFGGARGSGTNDKAG 515

Query: 118 GPHYVLRWATPQSIKETFVPLTEWKYP 144
                 R+ + +SIKE FV L ++ YP
Sbjct: 516 SISIFYRFVSARSIKENFVGLEDFHYP 542

Agaricus bisporus (taxid: 5341)

EC: 1

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 1

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
307181221	541	Delta-1-pyrroline-5-carboxylate dehydrog	0.979	0.266	0.758	5e-62
307200647	570	Delta-1-pyrroline-5-carboxylate dehydrog	0.979	0.252	0.724	9e-60
340728537	568	PREDICTED: LOW QUALITY PROTEIN: delta-1-	0.979	0.253	0.718	6e-59
350399488	568	PREDICTED: delta-1-pyrroline-5-carboxyla	0.979	0.253	0.718	7e-59
170042990	570	pyrroline-5-carboxylate dehydrogenase [C	0.979	0.252	0.731	3e-58
312375387	613	hypothetical protein AND_14227 [Anophele	0.972	0.233	0.722	6e-58
110760871	567	PREDICTED: delta-1-pyrroline-5-carboxyla	0.979	0.253	0.711	2e-57
345483689	568	PREDICTED: delta-1-pyrroline-5-carboxyla	0.979	0.253	0.718	4e-57
383847741	568	PREDICTED: delta-1-pyrroline-5-carboxyla	0.979	0.253	0.704	4e-57
347971770	573	AGAP004366-PA [Anopheles gambiae str. PE	0.972	0.249	0.722	6e-57

>gi|307181221|gb|EFN68918.1| Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial [Camponotus floridanus]

 Score =  241 bits (616), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 113/149 (75%), Positives = 130/149 (87%), Gaps = 5/149 (3%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           EI+GGG YD+SCGYFI+PTIVQ+KDP EK+MTEEIFGPVLTI+VY D DLDKT+K+V  S
Sbjct: 391 EILGGGGYDDSCGYFIEPTIVQSKDPKEKLMTEEIFGPVLTIYVYKDSDLDKTVKLVETS 450

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAG 117
           TPYALTGA+FAEDE + K+ L+DLKY AGN+Y+NDKSTGSVVGQQPFG     GTNDKAG
Sbjct: 451 TPYALTGAIFAEDEKWAKKALEDLKYTAGNFYVNDKSTGSVVGQQPFGGSRMSGTNDKAG 510

Query: 118 GPHYVLRWATPQSIKETFVPLTEWKYPYM 146
           GPHY LRWA+PQSIKETF P+ E+ YPYM
Sbjct: 511 GPHYALRWASPQSIKETFAPIREYDYPYM 539

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307200647|gb|EFN80755.1| Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial [Harpegnathos saltator]

 Score =  234 bits (597), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 108/149 (72%), Positives = 129/149 (86%), Gaps = 5/149 (3%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           E+IGGG YD S GYF++PTIVQ+KDP EK+MTEEIFGPVLT++VY D DLD+T+K+V  S
Sbjct: 420 EVIGGGGYDNSRGYFVEPTIVQSKDPKEKLMTEEIFGPVLTVYVYKDSDLDETMKLVETS 479

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAG 117
           TPYALTGA+FA+DE + ++ L+DLKY AGN+Y+NDKSTGSVVGQQPFG     GTNDKAG
Sbjct: 480 TPYALTGAIFAQDEKWSRKALEDLKYTAGNFYVNDKSTGSVVGQQPFGGSRMSGTNDKAG 539

Query: 118 GPHYVLRWATPQSIKETFVPLTEWKYPYM 146
           GPHY LRWA+PQ+IKETFVPL E+ YPYM
Sbjct: 540 GPHYALRWASPQAIKETFVPLREYDYPYM 568

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340728537|ref|XP_003402578.1| PREDICTED: LOW QUALITY PROTEIN: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial-like [Bombus terrestris]

 Score =  231 bits (590), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 107/149 (71%), Positives = 130/149 (87%), Gaps = 5/149 (3%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           +IIGGG+YD+S GYFI PTIV+TKDP +KI+TEEIFGPVLTI+VY D +LD+T+K+V  S
Sbjct: 418 KIIGGGKYDDSVGYFIDPTIVETKDPTDKIITEEIFGPVLTIYVYKDSNLDETMKLVESS 477

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAG 117
           TPYALTG++F++DE + +R L++ KY AGN+Y+NDKSTGSVVGQQPFG     GTNDKAG
Sbjct: 478 TPYALTGSIFSQDEKWARRALEEFKYTAGNFYVNDKSTGSVVGQQPFGGSRMSGTNDKAG 537

Query: 118 GPHYVLRWATPQSIKETFVPLTEWKYPYM 146
           GPHYVLRWA+PQSIKETFVPL E+ YPYM
Sbjct: 538 GPHYVLRWASPQSIKETFVPLREYDYPYM 566

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350399488|ref|XP_003485543.1| PREDICTED: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial-like [Bombus impatiens]

 Score =  231 bits (589), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 107/149 (71%), Positives = 130/149 (87%), Gaps = 5/149 (3%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           EIIGGG+Y++S GYFI PTIV+TKDP +KI+TEEIFGPVLTI+VY D +LD+T+K+V  S
Sbjct: 418 EIIGGGKYNDSVGYFIVPTIVETKDPTDKIITEEIFGPVLTIYVYKDSNLDETMKLVESS 477

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAG 117
           TPYALTG++F++DE + +R L++ KY AGN+Y+NDKSTGSVVGQQPFG     GTNDKAG
Sbjct: 478 TPYALTGSIFSQDEKWARRALEEFKYTAGNFYVNDKSTGSVVGQQPFGGSRMSGTNDKAG 537

Query: 118 GPHYVLRWATPQSIKETFVPLTEWKYPYM 146
           GPHYVLRWA+PQSIKETFVPL E+ YPYM
Sbjct: 538 GPHYVLRWASPQSIKETFVPLREYDYPYM 566

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170042990|ref|XP_001849188.1| pyrroline-5-carboxylate dehydrogenase [Culex quinquefasciatus] gi|167866390|gb|EDS29773.1| pyrroline-5-carboxylate dehydrogenase [Culex quinquefasciatus]

 Score =  229 bits (584), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 109/149 (73%), Positives = 128/149 (85%), Gaps = 5/149 (3%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           EI+ GG+YD+S GYFI+PTIVQ+ DPL+KIMTEEIFGPVL+I+VY DK+LD+TLK+V  S
Sbjct: 420 EIVAGGKYDDSKGYFIEPTIVQSSDPLDKIMTEEIFGPVLSIYVYKDKELDQTLKMVGTS 479

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAG 117
           T +ALTGAVF++DE+F KR LD+LK  AGN+Y+NDKSTGSVVGQQPFG     GTNDKAG
Sbjct: 480 TRFALTGAVFSKDEAFLKRALDELKLTAGNFYVNDKSTGSVVGQQPFGGGRMSGTNDKAG 539

Query: 118 GPHYVLRWATPQSIKETFVPLTEWKYPYM 146
           GPHY+LRW TPQSIKETFVPL E  Y YM
Sbjct: 540 GPHYILRWCTPQSIKETFVPLNEVDYQYM 568

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312375387|gb|EFR22772.1| hypothetical protein AND_14227 [Anopheles darlingi]

 Score =  228 bits (581), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 107/148 (72%), Positives = 126/148 (85%), Gaps = 5/148 (3%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           IIGGG+YD+S GYFI+PTIVQ+ DP ++IMTEEIFGPVL+I+VY DK+LD  +K+V  +T
Sbjct: 464 IIGGGKYDDSKGYFIEPTIVQSNDPTDRIMTEEIFGPVLSIYVYKDKELDSAMKLVGGTT 523

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGG 118
            +ALTGAVFA+DE+F KR LD+ K  AGN+Y+NDKSTGSVVGQQPFG     GTNDKAGG
Sbjct: 524 RFALTGAVFAQDEAFLKRALDEFKMTAGNFYVNDKSTGSVVGQQPFGGGRMSGTNDKAGG 583

Query: 119 PHYVLRWATPQSIKETFVPLTEWKYPYM 146
           PHYVLRWATPQS+KETFVPL E  YPYM
Sbjct: 584 PHYVLRWATPQSVKETFVPLEEIDYPYM 611

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110760871|ref|XP_623512.2| PREDICTED: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial-like [Apis mellifera]

 Score =  226 bits (576), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 106/149 (71%), Positives = 125/149 (83%), Gaps = 5/149 (3%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           EIIGGG+YD S GYFI PTIV TK+P +KIMTEEIFGPVLTI+VY D +LD+T+K+V  S
Sbjct: 417 EIIGGGEYDNSIGYFINPTIVITKNPKDKIMTEEIFGPVLTIYVYKDSNLDETMKLVESS 476

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAG 117
           TPYALTG++F++DE + +R L++ KY AGN+Y+NDKSTGSVVGQQPFG     GTNDKAG
Sbjct: 477 TPYALTGSIFSQDEKWARRALEEFKYTAGNFYVNDKSTGSVVGQQPFGGSRMSGTNDKAG 536

Query: 118 GPHYVLRWATPQSIKETFVPLTEWKYPYM 146
           GPHY LRWA+PQSIKETFVPL E  Y YM
Sbjct: 537 GPHYALRWASPQSIKETFVPLREHDYAYM 565

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345483689|ref|XP_001601273.2| PREDICTED: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial-like [Nasonia vitripennis]

 Score =  225 bits (574), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 107/149 (71%), Positives = 126/149 (84%), Gaps = 5/149 (3%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           EIIGGG YD S GYFI+PTIVQTK+P +KIMTEEIFGPVLTI+VY D +LD+T+K+V  S
Sbjct: 418 EIIGGGGYDNSRGYFIEPTIVQTKNPKDKIMTEEIFGPVLTIYVYKDTNLDETMKLVESS 477

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAG 117
           TPYALTGA+F++DE +    L++ +YAAGN+Y+NDKSTGSVVGQQPFG     GTNDKAG
Sbjct: 478 TPYALTGAIFSQDEKWAIHALEEFRYAAGNFYVNDKSTGSVVGQQPFGGGRMSGTNDKAG 537

Query: 118 GPHYVLRWATPQSIKETFVPLTEWKYPYM 146
           GPHY LRWA+PQSIKETFVPL E+ Y YM
Sbjct: 538 GPHYALRWASPQSIKETFVPLREYDYEYM 566

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383847741|ref|XP_003699511.1| PREDICTED: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial-like [Megachile rotundata]

 Score =  225 bits (574), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 105/149 (70%), Positives = 129/149 (86%), Gaps = 5/149 (3%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           EIIGGG+YD+S GYFI+PTIV +KDP +KIMTEEIFGPV+TI+VY D  LD+T+K+V  S
Sbjct: 418 EIIGGGKYDDSRGYFIEPTIVVSKDPKDKIMTEEIFGPVVTIYVYKDSKLDETMKLVETS 477

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAG 117
           TPYALTG++FA+DE++ ++ L++ KY AGN+Y+NDKSTGS+VGQQPFG     GTNDKAG
Sbjct: 478 TPYALTGSIFAQDETWARKALEEFKYTAGNFYVNDKSTGSIVGQQPFGGSRMSGTNDKAG 537

Query: 118 GPHYVLRWATPQSIKETFVPLTEWKYPYM 146
           GPHYVLRWA+PQSIKETFVPL E+ Y YM
Sbjct: 538 GPHYVLRWASPQSIKETFVPLREYDYEYM 566

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347971770|ref|XP_313649.4| AGAP004366-PA [Anopheles gambiae str. PEST] gi|333469021|gb|EAA09247.4| AGAP004366-PA [Anopheles gambiae str. PEST]

 Score =  225 bits (573), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 107/148 (72%), Positives = 125/148 (84%), Gaps = 5/148 (3%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           I+GGG+ D+S GYFI+PTIVQT DP ++IMTEEIFGPVLTI+VY DKDLD  +K+V  ST
Sbjct: 424 ILGGGKCDDSKGYFIEPTIVQTTDPTDRIMTEEIFGPVLTIYVYKDKDLDSAMKLVGGST 483

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGG 118
            +ALTGAVFA+D++F KR L++ K  AGN+Y+NDKSTGSVVGQQPFG     GTNDKAGG
Sbjct: 484 RFALTGAVFAQDQAFLKRALEEFKMTAGNFYLNDKSTGSVVGQQPFGGGRMSGTNDKAGG 543

Query: 119 PHYVLRWATPQSIKETFVPLTEWKYPYM 146
           PHYVLRWATPQSIKETFVPL +  YPYM
Sbjct: 544 PHYVLRWATPQSIKETFVPLKDIDYPYM 571

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
FB|FBgn0037138	574	P5CDh1 "delta-1-Pyrroline-5-ca	0.979	0.250	0.671	6.5e-51
ZFIN|ZDB-GENE-040426-1179	556	aldh4a1 "aldehyde dehydrogenas	0.979	0.258	0.624	1.5e-49
UNIPROTKB|A7YWE4	563	ALDH4A1 "Delta-1-pyrroline-5-c	0.972	0.253	0.614	6e-48
UNIPROTKB|J9P2L3	564	TAS1R2 "Taste receptor type 1	0.972	0.253	0.601	3.8e-46
MGI|MGI:2443883	562	Aldh4a1 "aldehyde dehydrogenas	0.972	0.254	0.601	4.8e-46
UNIPROTKB|I3LNB4	512	ALDH4A1 "Uncharacterized prote	0.965	0.277	0.605	1e-45
UNIPROTKB|E1C8Z8	551	ALDH4A1 "Uncharacterized prote	0.972	0.259	0.567	2.1e-45
UNIPROTKB|P30038	563	ALDH4A1 "Delta-1-pyrroline-5-c	0.972	0.253	0.587	3.4e-45
WB|WBGene00000112	563	alh-6 [Caenorhabditis elegans	0.986	0.257	0.573	7.1e-45
DICTYBASE|DDB_G0283293	558	DDB_G0283293 "putative delta-1	0.986	0.259	0.56	2.9e-39

FB|FBgn0037138 P5CDh1 "delta-1-Pyrroline-5-carboxylate dehydrogenase 1" [Drosophila melanogaster (taxid:7227)]

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 100/149 (67%), Positives = 119/149 (79%)

Query:     3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
             EI+ GG Y +S GYF+ PTIV +KDP ++IMTEEIFGPVL+I+VY + DL +T+K+V  S
Sbjct:   424 EILAGGTYSDSKGYFVNPTIVLSKDPKDRIMTEEIFGPVLSIYVYKESDLLETMKLVHTS 483

Query:    63 TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKAG 117
             T +ALTGAVF +DE F K  L + K AAGN+YINDKSTGSVVGQQPFGG     TNDKAG
Sbjct:   484 TKFALTGAVFGQDEDFVKCALQEFKMAAGNFYINDKSTGSVVGQQPFGGGRMSGTNDKAG 543

Query:   118 GPHYVLRWATPQSIKETFVPLTEWKYPYM 146
             GPHY+LRW +PQSIKETFVPL +  YPYM
Sbjct:   544 GPHYILRWTSPQSIKETFVPLRDVNYPYM 572

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0006560 "proline metabolic process" evidence=ISS;IMP

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006561 "proline biosynthetic process" evidence=IEA

GO:0007005 "mitochondrion organization" evidence=IMP

GO:0005739 "mitochondrion" evidence=IDA

ZFIN|ZDB-GENE-040426-1179 aldh4a1 "aldehyde dehydrogenase 4 family, member A1" [Danio rerio (taxid:7955)]

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 93/149 (62%), Positives = 116/149 (77%)

Query:     3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
             +II GG  D+  GYF++PTI++T DP EKIM EEIFGPVLT++VYP+ D  K L ++ ++
Sbjct:   407 KIIAGGNCDDKKGYFVEPTIIETTDPQEKIMNEEIFGPVLTVYVYPENDYKKVLHLIDNT 466

Query:    63 TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKAG 117
             +PYALTGA+F +D+S  +     L+ AAGNYYINDKSTGS+V QQPFGG     TNDK G
Sbjct:   467 SPYALTGAIFPQDKSVIEEAGKALRNAAGNYYINDKSTGSIVAQQPFGGARASGTNDKPG 526

Query:   118 GPHYVLRWATPQSIKETFVPLTEWKYPYM 146
             GPHYVLRW +PQ +K+T VPLTEWKYPYM
Sbjct:   527 GPHYVLRWTSPQVVKQTHVPLTEWKYPYM 555

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006561 "proline biosynthetic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006560 "proline metabolic process" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

UNIPROTKB|A7YWE4 ALDH4A1 "Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
 Identities = 91/148 (61%), Positives = 115/148 (77%)

Query:     4 IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
             I+ GG  D+S GYF++P IV+TKDP + IM EEIFGPVL ++VYPD++  +TL++V  +T
Sbjct:   415 ILAGGHCDDSVGYFVEPCIVETKDPQDPIMKEEIFGPVLAVYVYPDEEYKETLRLVDSTT 474

Query:    64 PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKAGG 118
              Y LTGAVFA+D+   +   + L++AAGN+YINDKSTGSVVGQQPFGG     TNDK GG
Sbjct:   475 SYGLTGAVFAQDKDVLREATELLRHAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGG 534

Query:   119 PHYVLRWATPQSIKETFVPLTEWKYPYM 146
             PHYVLRW +PQ IKET  PL +W+YPYM
Sbjct:   535 PHYVLRWTSPQVIKETHGPLGDWRYPYM 562

GO:0010133 "proline catabolic process to glutamate" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0006561 "proline biosynthetic process" evidence=IEA

UNIPROTKB|J9P2L3 TAS1R2 "Taste receptor type 1 member 2" [Canis lupus familiaris (taxid:9615)]

 Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 89/148 (60%), Positives = 111/148 (75%)

Query:     4 IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
             I+ GG+ D+S GYF++P IV++KDP E IM EEIFGPVLT++VYPD    +TL++V  +T
Sbjct:   416 ILAGGKCDDSVGYFVEPCIVESKDPQESIMKEEIFGPVLTVYVYPDDKYKETLRLVDSTT 475

Query:    64 PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKAGG 118
              Y LTGAVFA+D+   +     L+  AGN+YINDKSTGSVVGQQPFGG     TNDK GG
Sbjct:   476 SYGLTGAVFAQDKDVVREATTMLRNTAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGG 535

Query:   119 PHYVLRWATPQSIKETFVPLTEWKYPYM 146
             PHY+LRW +PQ IKET  PL +W+Y YM
Sbjct:   536 PHYILRWTSPQVIKETHEPLGDWRYSYM 563

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0006561 "proline biosynthetic process" evidence=IEA

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=IEA

MGI|MGI:2443883 Aldh4a1 "aldehyde dehydrogenase 4 family, member A1" [Mus musculus (taxid:10090)]

 Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
 Identities = 89/148 (60%), Positives = 113/148 (76%)

Query:     4 IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
             I+ GGQ +ES GY+++P I+++KDP E IM EEIFGPVLT++VYPD    +TL++V  +T
Sbjct:   414 ILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLQLVDSTT 473

Query:    64 PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKAGG 118
              Y LTGAVFA+D++  +     L+ AAGN+YINDKSTGSVVGQQPFGG     TNDK GG
Sbjct:   474 SYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGG 533

Query:   119 PHYVLRWATPQSIKETFVPLTEWKYPYM 146
             PHY+LRW +PQ IKET  PL +W+Y YM
Sbjct:   534 PHYILRWTSPQVIKETHKPLGDWRYSYM 561

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0006560 "proline metabolic process" evidence=IEA

GO:0006561 "proline biosynthetic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0042802 "identical protein binding" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|I3LNB4 ALDH4A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 89/147 (60%), Positives = 112/147 (76%)

Query:     4 IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
             I+ GGQ D+S GYF++P I+++KDP E IM EEIFGP+LT++VYPD    +TL++V  +T
Sbjct:   364 ILAGGQCDDSVGYFVEPCIIESKDPQEPIMKEEIFGPLLTVYVYPDDKYKETLRLVDSTT 423

Query:    64 PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKAGG 118
              Y LTGAVFA+D+   +   + L+ AAGN+YINDKSTGSVVGQQPFGG     TNDK GG
Sbjct:   424 SYGLTGAVFAQDKDVVREATEMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGG 483

Query:   119 PHYVLRWATPQSIKETFVPLTEWKYPY 145
             PHYVLRW +PQ IKET  PL + +YPY
Sbjct:   484 PHYVLRWTSPQVIKETHKPLGDRRYPY 510

GO:0042802 "identical protein binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0006561 "proline biosynthetic process" evidence=IEA

UNIPROTKB|E1C8Z8 ALDH4A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 84/148 (56%), Positives = 114/148 (77%)

Query:     4 IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
             I+ GG  D+S GYF++P IV+++DP + IM EEIFGP+LT++VYP++   + L+++  +T
Sbjct:   403 ILAGGGCDDSVGYFVEPCIVESQDPTDPIMKEEIFGPILTVYVYPEERYQEVLELIDTTT 462

Query:    64 PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKAGG 118
             PY LTGAVFA++ S  +     L+ AAGN+YINDKSTG+VV QQPFGG     TNDK GG
Sbjct:   463 PYGLTGAVFAQERSIIEEARSRLRNAAGNFYINDKSTGAVVAQQPFGGSRISGTNDKPGG 522

Query:   119 PHYVLRWATPQSIKETFVPLTEWKYPYM 146
             PHY+LRW +PQ+IKET VPL++W+Y YM
Sbjct:   523 PHYILRWTSPQAIKETHVPLSDWRYAYM 550

GO:0006561 "proline biosynthetic process" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

UNIPROTKB|P30038 ALDH4A1 "Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 87/148 (58%), Positives = 111/148 (75%)

Query:     4 IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
             I+ GG+ D+S GYF++P IV++KDP E IM EEIFGPVL+++VYPD    +TL++V  +T
Sbjct:   415 ILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTT 474

Query:    64 PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKAGG 118
              Y LTGAVF++D+   +     L+ AAGN+YINDKSTGS+VGQQPFGG     TNDK GG
Sbjct:   475 SYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPGG 534

Query:   119 PHYVLRWATPQSIKETFVPLTEWKYPYM 146
             PHY+LRW +PQ IKET  PL +W Y YM
Sbjct:   535 PHYILRWTSPQVIKETHKPLGDWSYAYM 562

GO:0006561 "proline biosynthetic process" evidence=IEA

GO:0009055 "electron carrier activity" evidence=TAS

GO:0010133 "proline catabolic process to glutamate" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=TAS

GO:0006560 "proline metabolic process" evidence=TAS

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=EXP

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0006562 "proline catabolic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0042802 "identical protein binding" evidence=IPI

GO:0019470 "4-hydroxyproline catabolic process" evidence=TAS

WB|WBGene00000112 alh-6 [Caenorhabditis elegans (taxid:6239)]

 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 86/150 (57%), Positives = 111/150 (74%)

Query:     2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
             + ++ GG+ D+  GYFI+PT++   DP  K++TEE+FGPV+T+ VY D  +D+ L  V D
Sbjct:   413 ANVVLGGKCDDKTGYFIEPTLITVTDPKSKLLTEEMFGPVVTVLVYEDSKVDEVLATVKD 472

Query:    62 STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKA 116
             +TPY LTGAVF++D+ F  R  D L+ A GN Y+NDKSTGS+VGQQPFGG     TNDKA
Sbjct:   473 ATPYGLTGAVFSQDKEFLYRARDVLRDAVGNMYLNDKSTGSIVGQQPFGGSRLSGTNDKA 532

Query:   117 GGPHYVLRWATPQSIKETFVPLTEWKYPYM 146
             GGPHY LRW +P +IKET V LT+WKYP M
Sbjct:   533 GGPHYGLRWTSPLTIKETSVSLTDWKYPSM 562

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=IEA

GO:0006561 "proline biosynthetic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040017 "positive regulation of locomotion" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

DICTYBASE|DDB_G0283293 DDB_G0283293 "putative delta-1-pyrroline-5-carboxylate dehydrogenase" [Dictyostelium discoideum (taxid:44689)]

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 84/150 (56%), Positives = 107/150 (71%)

Query:     2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
             +EII GG+ D S G+F++PTI+  KDP  K M EEIFGPVLTI+VY D   ++TLKI  +
Sbjct:   404 AEIIVGGKCDSSVGWFVEPTIILAKDPHYKSMEEEIFGPVLTIYVYEDSKFEETLKICDE 463

Query:    62 STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKA 116
             ++PYALTG++F+      +     LK AAGN+YINDK TG+VVGQQPFGG     TNDKA
Sbjct:   464 TSPYALTGSIFSTCRYAIETAHKYLKNAAGNFYINDKCTGAVVGQQPFGGSRASGTNDKA 523

Query:   117 GGPHYVLRWATPQSIKETFVPLTEWKYPYM 146
             G    +LRW + ++IKE FVPLT + YPYM
Sbjct:   524 GSSLNLLRWISARTIKENFVPLTSFTYPYM 553

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0006561 "proline biosynthetic process" evidence=IEA

GO:0003842 "1-pyrroline-5-carboxylate dehydrogenase activity" evidence=IEA

GO:0006560 "proline metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0010133 "proline catabolic process to glutamate" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7SY23	AL4A1_DANRE	1, ., 5, ., 1, ., 1, 2	0.6241	0.9795	0.2589	yes	N/A
A7YWE4	AL4A1_BOVIN	1, ., 5, ., 1, ., 1, 2	0.6148	0.9727	0.2539	yes	N/A
Q54RA2	AL4A1_DICDI	1, ., 5, ., 1, ., 1, 2	0.56	0.9863	0.2598	yes	N/A
P30038	AL4A1_HUMAN	1, ., 5, ., 1, ., 1, 2	0.5878	0.9727	0.2539	yes	N/A
Q8CHT0	AL4A1_MOUSE	1, ., 5, ., 1, ., 1, 2	0.6013	0.9727	0.2544	yes	N/A
P0C2X9	AL4A1_RAT	1, ., 5, ., 1, ., 1, 2	0.5197	0.9523	0.2486	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	147
cd07123	522	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca	5e-83
TIGR01236	532	TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb	1e-74
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	8e-47
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	1e-32
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	2e-31
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	3e-28
TIGR01237	511	TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb	6e-28
COG1012	472	COG1012, PutA, NAD-dependent aldehyde dehydrogenas	9e-27
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	3e-26
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	2e-24
PRK11904	1038	PRK11904, PRK11904, bifunctional proline dehydroge	6e-24
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	2e-21
COG4230	769	COG4230, COG4230, Delta 1-pyrroline-5-carboxylate	4e-20
PRK11905	1208	PRK11905, PRK11905, bifunctional proline dehydroge	6e-20
PRK11809	1318	PRK11809, putA, trifunctional transcriptional regu	5e-18
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	5e-17
TIGR01238	500	TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb	9e-17
PTZ00381	493	PTZ00381, PTZ00381, aldehyde dehydrogenase family	2e-16
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	5e-16
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	4e-15
cd07098	465	cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil	1e-14
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	1e-14
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	1e-14
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	1e-14
cd07134	433	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy	2e-14
cd07136	449	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh	8e-14
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	2e-13
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	4e-13
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	4e-13
cd07143	481	cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al	1e-12
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	1e-12
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	1e-12
cd07113	477	cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep	2e-12
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	2e-12
cd07086	478	cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha	2e-12
cd07132	443	cd07132, ALDH_F3AB, Aldehyde dehydrogenase family	4e-12
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	4e-12
cd07117	475	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo	5e-12
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	7e-12
cd07119	482	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de	7e-12
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	9e-12
cd07137	432	cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase	9e-12
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	1e-11
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	1e-11
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	1e-11
cd07559	480	cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu	1e-11
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	2e-11
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	2e-11
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	2e-11
cd07135	436	cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia	2e-11
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	2e-11
TIGR01804	467	TIGR01804, BADH, glycine betaine aldehyde dehydrog	2e-11
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	4e-11
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	5e-11
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	6e-11
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	7e-11
PLN02203	484	PLN02203, PLN02203, aldehyde dehydrogenase	1e-10
cd07140	486	cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate	3e-10
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	3e-10
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	3e-10
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	4e-10
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	5e-10
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	5e-10
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	7e-10
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	7e-10
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	9e-10
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	1e-09
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	1e-09
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	1e-09
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	1e-09
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	4e-09
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	4e-09
cd07133	434	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd	5e-09
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	8e-09
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	9e-09
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	2e-08
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	7e-08
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	7e-08
PLN02315	508	PLN02315, PLN02315, aldehyde dehydrogenase family	2e-07
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	2e-07
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	3e-07
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	3e-07
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	4e-07
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	4e-07
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	4e-07
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	6e-07
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	9e-07
cd07116	479	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD	1e-06
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	3e-06
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	1e-05
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	2e-05
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	2e-05
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	2e-05
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	8e-05
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	9e-05
PLN02174	484	PLN02174, PLN02174, aldehyde dehydrogenase family	1e-04
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	1e-04
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	2e-04
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	2e-04
PRK13968	462	PRK13968, PRK13968, putative succinate semialdehyd	3e-04
cd07129	454	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh	6e-04
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	7e-04
cd07128	513	cd07128, ALDH_MaoC-N, N-terminal domain of the mon	0.004

>gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

 Score =  252 bits (646), Expect = 5e-83
 Identities = 85/140 (60%), Positives = 111/140 (79%), Gaps = 5/140 (3%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           EII GG+ D+S GYF++PT+++T DP  K+MTEEIFGPVLT++VYPD D ++TL++V  +
Sbjct: 383 EIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTT 442

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAG 117
           +PYALTGA+FA+D    +   D L+ AAGN+YINDK TG+VVGQQPFG     GTNDKAG
Sbjct: 443 SPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAG 502

Query: 118 GPHYVLRWATPQSIKETFVP 137
            P  +LRW +P++IKETFVP
Sbjct: 503 SPLNLLRWVSPRTIKETFVP 522

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522

>gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

 Score =  230 bits (589), Expect = 1e-74
 Identities = 91/150 (60%), Positives = 114/150 (76%), Gaps = 5/150 (3%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            I+ GG+YD+S GYF++PT+V++KDP E +M EEIFGPVLT++VYPD    + L +V  +
Sbjct: 383 TILAGGKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDST 442

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAG 117
           T Y LTGAVFA+D          L++AAGN+YINDK TG+VVGQQPFG     GTNDKAG
Sbjct: 443 TSYGLTGAVFAKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAG 502

Query: 118 GPHYVLRWATPQSIKETFVPLTEWKYPYMG 147
           GPH +LRW +P+SIKETFVPLT+W YPYM 
Sbjct: 503 GPHNLLRWTSPRSIKETFVPLTDWSYPYMQ 532

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score =  157 bits (399), Expect = 8e-47
 Identities = 57/138 (41%), Positives = 83/138 (60%), Gaps = 8/138 (5%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           +++ GG+  E  GYF+ PT+V+   P  +I  EEIFGPVL++  Y D D  + L++  +S
Sbjct: 366 QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVA-NS 424

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAG 117
           TPY LTG V++      +      ++  GN YIN K TG++VG QPFG     GTN K G
Sbjct: 425 TPYGLTGGVYSRKREHLEEARR--EFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTG 482

Query: 118 GPHYVLRWATPQSIKETF 135
           GPHY+ R+   +++ E F
Sbjct: 483 GPHYLRRFLEMKAVAERF 500

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score =  120 bits (302), Expect = 1e-32
 Identities = 57/140 (40%), Positives = 75/140 (53%), Gaps = 20/140 (14%)

Query: 6   GGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPY 65
           G      + GYF+QPTI     P  ++  EEIFGPVL +     KD D+ L+I  D T Y
Sbjct: 383 GEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKA--KDFDEALEIAND-TEY 439

Query: 66  ALTGAVFAEDESFQKRCLDDLKYA-----AGNYYINDKSTGSVVGQQPFGG-----TNDK 115
            LTG VF+            L+ A      GN Y N K TG++VG+QPFGG     T  K
Sbjct: 440 GLTGGVFSRSPE-------HLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSK 492

Query: 116 AGGPHYVLRWATPQSIKETF 135
           AGGP Y+L++  P+++ E F
Sbjct: 493 AGGPDYLLQFMQPKTVTENF 512

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score =  116 bits (293), Expect = 2e-31
 Identities = 59/143 (41%), Positives = 79/143 (55%), Gaps = 20/143 (13%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            ++ GG+ D+S GYFIQPTI    DP  +IM EEIFGPV+       KD D  L+I  + 
Sbjct: 382 RLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVA--FIKAKDFDHALEIANN- 438

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYA-----AGNYYINDKSTGSVVGQQPFG-----GT 112
           T Y LTGAV + +        + L+ A      GN Y N   TG++VG  PFG     GT
Sbjct: 439 TEYGLTGAVISNNR-------EHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGT 491

Query: 113 NDKAGGPHYVLRWATPQSIKETF 135
           + KAGGP Y+L +   +++ E F
Sbjct: 492 DSKAGGPDYLLLFLQAKTVSEMF 514

Length = 514

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score =  106 bits (268), Expect = 3e-28
 Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 10/132 (7%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           + GG + +   GYF+ PT++   DP   I  EEIFGPVL +  +  KD ++ +++  D T
Sbjct: 305 LCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPF--KDEEEAIELAND-T 361

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGP 119
            Y L   VF  D     R  + L+  AG  +IND S G      PFGG       + GGP
Sbjct: 362 EYGLAAGVFTRDLERALRVAERLE--AGTVWINDYSVG-AEPSAPFGGVKQSGIGREGGP 418

Query: 120 HYVLRWATPQSI 131
           + +  +  P+++
Sbjct: 419 YGLEEYTEPKTV 430

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

 Score =  106 bits (267), Expect = 6e-28
 Identities = 52/138 (37%), Positives = 74/138 (53%), Gaps = 10/138 (7%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            ++ GG  D+S GYFI PTI    D   ++  EEIFGPV+        D D+ L+I  ++
Sbjct: 379 RLVSGGCGDDSKGYFIGPTIFADVDRKARLAQEEIFGPVVAFI--RASDFDEALEI-ANN 435

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAG 117
           T Y LTG V + +     R   +  +  GN Y N   TG++VG QPFG     GT+ KAG
Sbjct: 436 TEYGLTGGVISNNRDHINRAKAE--FEVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAG 493

Query: 118 GPHYVLRWATPQSIKETF 135
           GP Y+  +   +++ E F
Sbjct: 494 GPDYLALFMQAKTVTEMF 511

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511

>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

 Score =  103 bits (259), Expect = 9e-27
 Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 11/140 (7%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            ++ GG+     GYF++PTI++   P  +I  EEIFGPVL +  +  KD ++ +++  + 
Sbjct: 340 RLLAGGKRPG--GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRF--KDEEEAIELA-ND 394

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTND----KAGG 118
           T Y L  A+F  D +   R    L+  AG   IND + G+ +   PFGG       + GG
Sbjct: 395 TEYGLAAAIFTRDLARAFRVARRLE--AGMVGINDYTGGADIAYLPFGGVKQSGLGREGG 452

Query: 119 PHYVLRWATPQSIKETFVPL 138
            + +  +   +++     P 
Sbjct: 453 KYGLEEFTEVKTVTIKLGPA 472

Length = 472

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score =  102 bits (256), Expect = 3e-26
 Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 10/133 (7%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           +++ GG+     GYF++PT++    P  +I  EEIFGPVL++  +  KD D+ +++  D 
Sbjct: 333 KLLCGGEAGLEKGYFVEPTVLADVTPDMRIAQEEIFGPVLSVIPF--KDEDEAIELAND- 389

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTND----KAGG 118
           T Y L   VF  D     R    L+  AG  +IND +TG      PFGG       + GG
Sbjct: 390 TEYGLAAGVFTNDLERALRVARRLE--AGMVWINDYTTGDPEA-LPFGGFKQSGFGREGG 446

Query: 119 PHYVLRWATPQSI 131
              +  +   +++
Sbjct: 447 KEGLEEYTETKTV 459

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score = 97.3 bits (243), Expect = 2e-24
 Identities = 46/124 (37%), Positives = 75/124 (60%), Gaps = 14/124 (11%)

Query: 11  DESCGYFIQPTIVQTKDPLEKI--MTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALT 68
           D+  GYF+ P I++    +  I  +T E+FGP+L +  +  +DLD+ ++ + ++T Y LT
Sbjct: 384 DDGNGYFVAPGIIE----IVGIFDLTTEVFGPILHVIRFKAEDLDEAIEDI-NATGYGLT 438

Query: 69  GAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKAGGPHYVL 123
             + + DE   +   + ++  AGN YIN   TG++VG+QPFGG     T  KAGGP+Y+L
Sbjct: 439 LGIHSRDEREIEYWRERVE--AGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLL 496

Query: 124 RWAT 127
           R+  
Sbjct: 497 RFGN 500

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 96.0 bits (240), Expect = 6e-24
 Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 14/124 (11%)

Query: 15   GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD--STPYALTGAVF 72
            G+F+ PT  +        +  E+FGP+L +  Y   DLDK   ++    +T Y LT  + 
Sbjct: 907  GHFVAPTAFEIDSI--SQLEREVFGPILHVIRYKASDLDK---VIDAINATGYGLTLGIH 961

Query: 73   AEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGGPHYVLRWAT 127
            +  E    R  D ++   GN Y+N    G+VVG QPFG     GT  KAGGPHY+LR+AT
Sbjct: 962  SRIEETADRIADRVR--VGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFAT 1019

Query: 128  PQSI 131
             +++
Sbjct: 1020 EKTV 1023

Length = 1038

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score = 88.1 bits (219), Expect = 2e-21
 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 10/115 (8%)

Query: 21  TIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQK 80
           T++   DP   I  EEIFGPVL +  +  KD ++ + +  + T Y LT  VF  D +   
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRF--KDEEEAIALA-NDTEYGLTAGVFTRDLNRAL 313

Query: 81  RCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTND----KAGGPHYVLRWATPQSI 131
           R  + L+  AG  YIND S G V  + PFGG  +    + GGP+ +  +   +++
Sbjct: 314 RVAERLR--AGTVYINDSSIG-VGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTV 365

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

 Score = 84.8 bits (210), Expect = 4e-20
 Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 10/115 (8%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G F+ PT+++ ++  E  +  E+FGPVL +  Y   +LD+ +  + ++T Y LT  V   
Sbjct: 459 GTFVAPTLIELENLDE--LQREVFGPVLHVVRYKRDELDEVIDQI-NATGYGLTLGVHTR 515

Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGGPHYVLR 124
            +       +     AGN Y+N    G+VVG QPFG     GT  KAGGP Y+LR
Sbjct: 516 IDETIAHVTERAH--AGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLR 568

Length = 769

>gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 84.5 bits (210), Expect = 6e-20
 Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 14/117 (11%)

Query: 15   GYFIQPTIVQTKDPLEKI--MTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVF 72
            G F+ PT+++    ++ I  +  E+FGPVL +  +   +LD+ +  + ++T Y LT  + 
Sbjct: 899  GTFVAPTLIE----IDSISDLEREVFGPVLHVVRFKADELDRVIDDI-NATGYGLTFGLH 953

Query: 73   AEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGGPHYVLR 124
            +  +         ++  AGN Y+N    G+VVG QPFG     GT  KAGGP Y+ R
Sbjct: 954  SRIDETIAHVTSRIR--AGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGR 1008

Length = 1208

>gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score = 78.9 bits (195), Expect = 5e-18
 Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 20/127 (15%)

Query: 10   YDESC----GYFIQPTIVQTKDPLEKI--MTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
             + S     G F+ PT+++    L+    +  E+FGPVL +  Y    LD+ ++ + +++
Sbjct: 987  RENSEDWQSGTFVPPTLIE----LDSFDELKREVFGPVLHVVRYNRNQLDELIEQI-NAS 1041

Query: 64   PYALTGAVFAE-DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAG 117
             Y LT  V    DE+   +         GN Y+N    G+VVG QPFG     GT  KAG
Sbjct: 1042 GYGLTLGVHTRIDETIA-QVTGSAH--VGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAG 1098

Query: 118  GPHYVLR 124
            GP Y+ R
Sbjct: 1099 GPLYLYR 1105

Length = 1318

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score = 76.2 bits (188), Expect = 5e-17
 Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 16/140 (11%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           E + GG Y++  GYF++PT+     P  +I  EEIFGPV+ +       L++ ++I  D 
Sbjct: 348 ERLTGGGYEK--GYFVEPTVFTDVTPDMRIAQEEIFGPVVALI--EVSSLEEAIEIAND- 402

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHYV 122
           T Y L+ A++ ED +   R   DL+  AG  Y+N  + G+ V   PFGG   K+G  H  
Sbjct: 403 TEYGLSSAIYTEDVNKAFRARRDLE--AGITYVNAPTIGAEV-HLPFGG-VKKSGNGH-- 456

Query: 123 LRWATPQSIKETFVPLTEWK 142
            R A   ++       TEWK
Sbjct: 457 -REAGTTALDA----FTEWK 471

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

 Score = 75.3 bits (185), Expect = 9e-17
 Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 10/115 (8%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G F+ PT+ +  D  E  ++EE+FGPVL +  Y  ++LD+ +  + + T Y LT  V + 
Sbjct: 385 GTFVAPTLFELDDIAE--LSEEVFGPVLHVVRYKARELDQIVDQI-NQTGYGLTMGVHSR 441

Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGGPHYVLR 124
            E+  +      +   GN Y+N    G+VVG QPFG     GT  KAGGPHY+ R
Sbjct: 442 IETTYRWIEKHAR--VGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYR 494

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500

>gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional

 Score = 74.3 bits (183), Expect = 2e-16
 Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 14/115 (12%)

Query: 1   MSEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVT 60
             +++ GG+ D    Y + PTI+   D    +M EEIFGP+L I  Y  +++D+ L+ + 
Sbjct: 307 GGKVVYGGEVDIENKY-VAPTIIVNPDLDSPLMQEEIFGPILPILTY--ENIDEVLEFI- 362

Query: 61  DSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVV----GQQPFGG 111
           +S P  L    F ED+  ++  L+    ++G   IND     V        PFGG
Sbjct: 363 NSRPKPLALYYFGEDKRHKELVLE--NTSSGAVVIND----CVFHLLNPNLPFGG 411

Length = 493

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score = 73.2 bits (180), Expect = 5e-16
 Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 17/141 (12%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           +I+ GG+ DE  G F  PT+++   P   +M EE+FGPVL I     KD ++ ++I  +S
Sbjct: 330 KILYGGKRDE--GSFFPPTVLENDTPDMIVMKEEVFGPVLPI--AKVKDDEEAVEI-ANS 384

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHYV 122
           T Y L  +VF  D +   +   +L+   G   IND ST       PFGG      G    
Sbjct: 385 TEYGLQASVFTNDINRALKVARELEA--GGVVIND-STRFRWDNLPFGGFKKSGIG---- 437

Query: 123 LRWATPQSIKETFVPLTEWKY 143
                 + ++ T + +TE K 
Sbjct: 438 -----REGVRYTMLEMTEEKT 453

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score = 70.6 bits (174), Expect = 4e-15
 Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 6/110 (5%)

Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
            +++ GGQ D+    +I PTI+    P   +M EEIFGP+L I  Y   DLD+ ++ + +
Sbjct: 297 GKVVIGGQVDKE-ERYIAPTILDDVSPDSPLMQEEIFGPILPILTY--DDLDEAIEFI-N 352

Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           S P  L   +F+ED++ Q+R L +   ++G   +ND    + +   PFGG
Sbjct: 353 SRPKPLALYLFSEDKAVQERVLAET--SSGGVCVNDVLLHAAIPNLPFGG 400

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like

 Score = 69.3 bits (170), Expect = 1e-14
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 13/125 (10%)

Query: 3   EIIGGGQY----DESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKI 58
            ++ GG+     +   G++  PT++    P  KI  EE+FGPV+ +      D ++ ++I
Sbjct: 330 RLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKA--SDDEEAVEI 387

Query: 59  VTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTN----D 114
             +ST Y L  +VF +D    +R    L+   G   IND      V Q PFGG       
Sbjct: 388 A-NSTEYGLGASVFGKDIKRARRIASQLE--TGMVAINDFGVNYYVQQLPFGGVKGSGFG 444

Query: 115 KAGGP 119
           +  G 
Sbjct: 445 RFAGE 449

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score = 69.2 bits (170), Expect = 1e-14
 Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 9/132 (6%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
            + GG      G F +PT++        +M EE FGPVL   V P  D D+ + +  DS 
Sbjct: 325 ALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLP--VMPVADEDEAIALANDS- 381

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAG----GP 119
            Y L+ +VF+ D +  +     L+  AG   IND    + +   PFGG  D  G    G 
Sbjct: 382 RYGLSASVFSRDLARAEAIARRLE--AGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGA 439

Query: 120 HYVLRWATPQSI 131
             +  +  P++I
Sbjct: 440 EGLREFCRPKAI 451

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score = 69.3 bits (170), Expect = 1e-14
 Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 7/106 (6%)

Query: 6   GGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPY 65
           GG +   + G F QPTI     P   I  EEIFGPVL++  +    +D+ + +  D T Y
Sbjct: 330 GGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTF--DTVDEAIALAND-TVY 386

Query: 66  ALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
            L+  V+++D          ++  AG  ++N    GS   + PFGG
Sbjct: 387 GLSAGVWSKDIDTALTVARRIR--AGTVWVNTFLDGSP--ELPFGG 428

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score = 69.2 bits (170), Expect = 1e-14
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 10/107 (9%)

Query: 6   GGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPY 65
           GG ++  S GYFIQPT+        KI  EEIFGPV+TI  +  K  D+ ++   D+  Y
Sbjct: 353 GGERHG-SKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKF--KTEDEVIERANDTE-Y 408

Query: 66  ALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQ-PFGG 111
            L   VF +D +   R    LK  AG  ++N   T +V     PFGG
Sbjct: 409 GLAAGVFTKDINKALRVSRALK--AGTVWVN---TYNVFDAAVPFGG 450

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like

 Score = 68.8 bits (169), Expect = 2e-14
 Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 8/112 (7%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           ++  GGQ+D     +I PT++    P  KIM EEIFGPVL I  Y  +DLD+ ++ +   
Sbjct: 305 KVEFGGQFDA-AQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITY--EDLDEVIEYINAK 361

Query: 63  -TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTN 113
             P AL   VF++D++   + L     ++G   +ND     +    PFGG N
Sbjct: 362 PKPLAL--YVFSKDKANVNKVLART--SSGGVVVNDVVLHFLNPNLPFGGVN 409

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433

>gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like

 Score = 66.8 bits (164), Expect = 8e-14
 Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 8/110 (7%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD- 61
           +I+ GG  D     +I+PTI+      + +M EEIFGP+L +  Y    LD+ ++I+   
Sbjct: 298 KIVFGGNTDRE-TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTY--DTLDEAIEIIKSR 354

Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
             P AL   +F+ED+  +K+ L++L +  G   IND          PFGG
Sbjct: 355 PKPLALY--LFSEDKKVEKKVLENLSFGGG--CINDTIMHLANPYLPFGG 400

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score = 65.6 bits (161), Expect = 2e-13
 Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 8/97 (8%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           GYF++PT+     P   I  EEIFGPVL+I  Y   D D+ + I  D TPY L G V++ 
Sbjct: 352 GYFVKPTVFADVTPDMTIAREEIFGPVLSIIPY--DDEDEAIAIAND-TPYGLAGYVWSA 408

Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           D    +     L+  AG  +IN     +     PFGG
Sbjct: 409 DPERARAVARRLR--AGQVHING---AAFNPGAPFGG 440

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score = 64.9 bits (159), Expect = 4e-13
 Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 7/109 (6%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           +++ GG+  +  GYFI PTIV       +I+ EE FGPVL +  Y   D D+ +    D 
Sbjct: 319 KVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKY--SDEDEVIARAND- 375

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           + Y L  +V++ D    +     L+  AG  +IN  + G++    PFGG
Sbjct: 376 SEYGLGASVWSSDLERAEAVARRLE--AGTVWIN--THGALDPDAPFGG 420

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score = 64.9 bits (159), Expect = 4e-13
 Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 10/118 (8%)

Query: 3   EIIGGGQYDE---SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIV 59
            I+ GG+  E   + GYF+ PT++    P  ++  EEIFGPVL   V P  D  + + + 
Sbjct: 323 RIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLA--VMPFDDEAEAIALA 380

Query: 60  TDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAG 117
              T Y L   V+  D     R    L+  AG  ++N+   G  + + PFGG   K+G
Sbjct: 381 NG-TDYGLVAGVWTRDGDRALRVARRLR--AGQVFVNNYGAGGGI-ELPFGG-VKKSG 433

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

 Score = 63.7 bits (155), Expect = 1e-12
 Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 7/108 (6%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           +  GG+   + GYFI+PTI        KI+ EEIFGPV+   V   K  ++ +K   DST
Sbjct: 353 VETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVA--VIKFKTEEEAIKRANDST 410

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
            Y L  AVF  + +   R  + LK  AG  ++N  +   +  Q PFGG
Sbjct: 411 -YGLAAAVFTNNINNAIRVANALK--AGTVWVNCYNL--LHHQVPFGG 453

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score = 63.7 bits (156), Expect = 1e-12
 Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 22/142 (15%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            ++ GG Y+   G F QPT++    P   I  EEIFGPV    V P  D ++ +++  D 
Sbjct: 306 RLLTGGTYE---GLFYQPTVLSDVTPDMPIFREEIFGPV--APVIPFDDDEEAVELAND- 359

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKST--GSVVGQQPFGGTNDKAGGPH 120
           T Y L+ AVF  D        + L+   G  +IND++      V   PFGG     GG  
Sbjct: 360 TEYGLSAAVFTRDLERAMAFAERLE--TGMVHINDQTVNDEPHV---PFGGVKASGGG-- 412

Query: 121 YVLRWATPQSIKETFVPLTEWK 142
              R+  P S++E     TEW+
Sbjct: 413 ---RFGGPASLEE----FTEWQ 427

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score = 63.2 bits (154), Expect = 1e-12
 Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 7/110 (6%)

Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           + I+ GG+  +  G+F  PT++    P  ++ TEE+FGPV +  +Y   D+D+ ++I   
Sbjct: 328 ATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVAS--LYRVADIDEAIEIANA 385

Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
            T + L    +  DE+ Q+R +DDL+  AG  +IN  +      + PFGG
Sbjct: 386 -TTFGLGSNAWTRDEAEQERFIDDLE--AGQVFINGMTVSY--PELPFGG 430

Length = 457

>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

 Score = 62.8 bits (153), Expect = 2e-12
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 19/122 (15%)

Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
            EI+ GG+     GYF+QPT+V  +    ++M EE FGPV++   Y D   ++ L  + +
Sbjct: 347 DEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYED---EEELIQLIN 403

Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYIN-----DKSTGSVVGQQPFGGTNDKA 116
            TP+ LT +V+  + S   R +  ++  AG  ++N     D +        PFGG   K 
Sbjct: 404 DTPFGLTASVWTNNLSKALRYIPRIE--AGTVWVNMHTFLDPAV-------PFGGM--KQ 452

Query: 117 GG 118
            G
Sbjct: 453 SG 454

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score = 62.8 bits (153), Expect = 2e-12
 Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 7/97 (7%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           GYFI PTI        +I+ EEIFGPV+ I  +  K  ++ +K   D T Y L  AVF +
Sbjct: 367 GYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKF--KTYEEAIKKAND-TTYGLAAAVFTK 423

Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           D     R   +L+  AG  +IN  +   V    PFGG
Sbjct: 424 DIRRAHRVARELE--AGMVWINSSNDSDV--GVPFGG 456

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

 Score = 62.6 bits (153), Expect = 2e-12
 Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 18/135 (13%)

Query: 4   IIGGGQYDESC-GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           + GG + D    G +++PTIV       +I+ EE F P+L +  +    L++ + I  D 
Sbjct: 345 LTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKF--DSLEEAIAINND- 401

Query: 63  TPYALTGAVFAED--ESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPH 120
            P  L+ ++F ED  E+F  R L       G   +N  ++G+ +G   FGG   + GG  
Sbjct: 402 VPQGLSSSIFTEDLREAF--RWLGPKGSDCGIVNVNIPTSGAEIG-GAFGG-EKETGGGR 457

Query: 121 --------YVLRWAT 127
                     +R +T
Sbjct: 458 ESGSDAWKQYMRRST 472

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478

>gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

 Score = 62.2 bits (152), Expect = 4e-12
 Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 8/111 (7%)

Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
            ++  GGQ DE   Y I PT++    P + +M EEIFGP+L I      +LD+ ++ +  
Sbjct: 297 GKVAIGGQTDEKERY-IAPTVLTDVKPSDPVMQEEIFGPILPIV--TVNNLDEAIEFINS 353

Query: 62  S-TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
              P AL   VF+ ++    + L     ++G   +ND      +   PFGG
Sbjct: 354 REKPLALY--VFSNNKKVINKILS--NTSSGGVCVNDTIMHYTLDSLPFGG 400

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score = 61.7 bits (150), Expect = 4e-12
 Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 7/115 (6%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           ++ GG+   + G+F++PTI     P  +I  EEIFGPV++  V   +D ++ L+I  + T
Sbjct: 325 LLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVS--VMRFRDEEEALRI-ANGT 381

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
            Y L   V+  D     R    LK  AG  +IN  +        PFGG      G
Sbjct: 382 EYGLAAGVWTRDLGRAHRVAAALK--AGTVWIN--TYNRFDPGSPFGGYKQSGFG 432

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

 Score = 61.7 bits (150), Expect = 5e-12
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 6/75 (8%)

Query: 4   IIGGGQYDES---CGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVT 60
           + GG +  E+    G+FI+PT++       ++  EEIFGPV T  V   K  D+ + +  
Sbjct: 344 LTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVAT--VIKFKTEDEVIDMAN 401

Query: 61  DSTPYALTGAVFAED 75
           DS  Y L G VF +D
Sbjct: 402 DSE-YGLGGGVFTKD 415

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score = 61.4 bits (150), Expect = 7e-12
 Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 22/121 (18%)

Query: 6   GGG---QYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           GGG     D   GYF++PT++   D   ++  EEIFGPV+T  V P  D ++ +++  D 
Sbjct: 328 GGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVT--VIPFDDEEEAIELAND- 384

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYIN-----DKSTGSVVGQQPFGGTNDKAG 117
           TPY L   V+  D     R    L+  AG  ++N     D  T       PFGG   KA 
Sbjct: 385 TPYGLAAYVWTRDLGRAHRVARRLE--AGTVWVNCWLVRDLRT-------PFGGV--KAS 433

Query: 118 G 118
           G
Sbjct: 434 G 434

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

 Score = 61.2 bits (149), Expect = 7e-12
 Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 10/109 (9%)

Query: 6   GGGQYDESC---GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           GG +        GYF++PTI    D   +I+ EEIFGPVLT  V      ++ +++  D 
Sbjct: 345 GGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLT--VERFDTEEEAIRLAND- 401

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           TPY L GAV+ +D +   R    L+  AG  +IND        + P+GG
Sbjct: 402 TPYGLAGAVWTKDIARANRVARRLR--AGTVWIND--YHPYFAEAPWGG 446

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score = 60.9 bits (148), Expect = 9e-12
 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 4/73 (5%)

Query: 5   IGGGQ-YDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
            GGG+  D   G+F++PT++   D   ++  EEIFGPVLT+  + D D D  ++I  DS 
Sbjct: 352 CGGGRPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAH-DGD-DDAVRIANDS- 408

Query: 64  PYALTGAVFAEDE 76
           PY L+G VF  D 
Sbjct: 409 PYGLSGTVFGADP 421

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

 Score = 60.9 bits (148), Expect = 9e-12
 Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 10/112 (8%)

Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEK--IMTEEIFGPVLTIFVYPDKDLDKTLKIV 59
            +I+ GG+ DE    +I+PTI+   DP     IMTEEIFGP+L I     K ++++++I+
Sbjct: 303 DKIVHGGERDEK-NLYIEPTILL--DPPLDSSIMTEEIFGPLLPIITV--KKIEESIEII 357

Query: 60  TDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
            +S P  L   VF +++  ++R + +   ++G    ND      +   PFGG
Sbjct: 358 -NSRPKPLAAYVFTKNKELKRRIVAET--SSGGVTFNDTVVQYAIDTLPFGG 406

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score = 60.9 bits (148), Expect = 1e-11
 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 13/100 (13%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G++++PT+     P  +I  EEIFGPVL++  +  +D  + +        Y LT A++  
Sbjct: 339 GFYVEPTVFADVTPGMRIAREEIFGPVLSVLRW--RDEAEMVAQANG-VEYGLTAAIWTN 395

Query: 75  DESFQKRCLDDLKYAAGNYYINDKST---GSVVGQQPFGG 111
           D S   R    ++  AG  +IN  S    G+     PFGG
Sbjct: 396 DISQAHRTARRVE--AGYVWINGSSRHFLGA-----PFGG 428

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score = 60.7 bits (148), Expect = 1e-11
 Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 23/126 (18%)

Query: 4   IIGGGQYDESC-GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           + GG +      GY++ P +        +I  EEIFGPV  +     +D D+ L I  D 
Sbjct: 344 VYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRV--RDYDEALAIAND- 400

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYA--------AGNYYINDKSTGSVVGQQPFGGTND 114
           T + L+  +              LK+A        AG   +N  + G V    PFGG   
Sbjct: 401 TEFGLSAGI----------VTTSLKHATHFKRRVEAGVVMVNLPTAG-VDYHVPFGGRKG 449

Query: 115 KAGGPH 120
            + GP 
Sbjct: 450 SSYGPR 455

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score = 60.8 bits (148), Expect = 1e-11
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 7/97 (7%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G+++ P ++        I+ EEIFGPV++I   P    ++ ++   D T Y L   VF  
Sbjct: 339 GFYVSPCVLTDCTDDMTIVREEIFGPVMSI--LPFDTEEEVIRRAND-TTYGLAAGVFTR 395

Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           D     R +  L+  AG  +IN  +   V  + PFGG
Sbjct: 396 DLQRAHRVIAQLQ--AGTCWINTYNISPV--EVPFGG 428

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

 Score = 60.4 bits (147), Expect = 1e-11
 Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)

Query: 4   IIGGGQYDES---CGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVT 60
           + GG +        GYF +PT+++  +   +I  EEIFGPVL   V   KD ++ + I  
Sbjct: 349 LTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLA--VITFKDEEEAIAIAN 406

Query: 61  DSTPYALTGAVFAED 75
           D T Y L G V+  D
Sbjct: 407 D-TEYGLGGGVWTRD 420

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score = 60.3 bits (147), Expect = 2e-11
 Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 8/107 (7%)

Query: 6   GGGQ-YDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTP 64
           GG +   E+ G+F++PT+     P  +I  EEIFGPVL+  V      ++ + +  D + 
Sbjct: 337 GGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLS--VITFDSEEEAVALAND-SV 393

Query: 65  YALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           Y L  +V+  D S   R    L+  AG  ++N    G +    PFGG
Sbjct: 394 YGLAASVWTSDLSRAHRVARRLR--AGTVWVNCFDEGDI--TTPFGG 436

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score = 60.1 bits (147), Expect = 2e-11
 Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 13/112 (11%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQ--TKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVT 60
           +++ GG+     GYF +PT++   T D L  IM EE FGPV  I  +     D+ +    
Sbjct: 324 KVLTGGKRLGLGGYFYEPTVLTDVTDDML--IMNEETFGPVAPIIPF--DTEDEVIARAN 379

Query: 61  DSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVG-QQPFGG 111
           D TPY L   VF  D +   R  + L+   G   IN   TG +   + PFGG
Sbjct: 380 D-TPYGLAAYVFTRDLARAWRVAEALEA--GMVGIN---TGLISDAEAPFGG 425

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score = 60.2 bits (147), Expect = 2e-11
 Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 11/110 (10%)

Query: 7   GGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYA 66
           GG+  +  G F  PT++    P      EE+FGPV  +     KD ++ + +  DS P+ 
Sbjct: 306 GGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKV--KDEEEAIALANDS-PFG 362

Query: 67  LTGAVFAEDESFQKRCLDDLKYAAGNYYIND--KSTGSVVGQQPFGGTND 114
           L G+VF  D    +R    L+  AG  +IN   KS   +    PFGG   
Sbjct: 363 LGGSVFTTDLERAERVARRLE--AGMVFINGMVKSDPRL----PFGGVKR 406

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

 Score = 59.9 bits (146), Expect = 2e-11
 Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 6/112 (5%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           +++ GG+ DE+   FI PTIV      + +M+EE+FGPVL I      DLD+ +K++ +S
Sbjct: 308 KVVIGGEMDEA-TRFIPPTIVSDVSWDDSLMSEELFGPVLPI--IKVDDLDEAIKVI-NS 363

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTND 114
               L   +F +D+S     L   +  +G   IND      V   PFGG  D
Sbjct: 364 RDTPLALYIFTDDKSEIDHILTRTR--SGGVVINDTLIHVGVDNAPFGGVGD 413

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score = 60.0 bits (146), Expect = 2e-11
 Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 7/109 (6%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            ++ GG+  E  GYF +PT+V      ++I+ EEIFGPV+T  V P  D D+ +++  D 
Sbjct: 323 RVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVT--VQPFDDEDEAIELAND- 379

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
             Y L  +V+  D     R    L +  G  ++N      +  + P GG
Sbjct: 380 VEYGLASSVWTRDVGRAMRLSARLDF--GTVWVNTH--IPLAAEMPHGG 424

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase

 Score = 59.8 bits (145), Expect = 2e-11
 Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 15/115 (13%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G+F++PT+         I+ EEIFGPV+T+  + D+  D+ +    D T Y L G VF  
Sbjct: 356 GFFVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDE--DEVIARAND-TEYGLAGGVFTA 412

Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGT--------NDKAGGPHY 121
           D     R  D L+  AG  +IN  +      + PFGG         N KA   HY
Sbjct: 413 DLGRAHRVADQLE--AGTVWINTYNLYPA--EAPFGGYKQSGIGRENGKAALAHY 463

Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score = 59.2 bits (144), Expect = 4e-11
 Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 5/92 (5%)

Query: 5   IGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTP 64
            GG + +   GYF +PT++       +I+ EEIFGPVL +  +    LD+ +++  DS  
Sbjct: 343 TGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKF--SSLDEAIELANDSE- 399

Query: 65  YALTGAVFAEDESFQKRCLDDLKYAAGNYYIN 96
           Y LT  ++ E+ +   R  ++L++  G  YIN
Sbjct: 400 YGLTSYIYTENLNTAMRATNELEF--GETYIN 429

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score = 58.7 bits (143), Expect = 5e-11
 Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 3/62 (4%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G+F++PT+    D   +I  EEIFGPVL++  Y   D D  ++I  DS  Y L+G+V+  
Sbjct: 357 GWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPY--DDEDDAVRIANDS-DYGLSGSVWTA 413

Query: 75  DE 76
           D 
Sbjct: 414 DV 415

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score = 58.8 bits (143), Expect = 6e-11
 Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 9/109 (8%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            ++ GG+ D   G  ++PT++    P  K++ EE+F PV+++   P   LD+ + +  DS
Sbjct: 328 RLLTGGKRD---GAILEPTVLTDVPPDMKVVCEEVFAPVVSL--NPFDTLDEAIAMANDS 382

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
            PY L   VF  D     +   +L    G   IND ST   V   P+GG
Sbjct: 383 -PYGLQAGVFTNDLQKALKAAREL--EVGGVMINDSSTFR-VDHMPYGG 427

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score = 58.5 bits (142), Expect = 7e-11
 Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 18/141 (12%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           +++ GG+YD   G F QPT++    P  +I  EE FGPV +  V P KD ++ L++  D 
Sbjct: 326 KLLTGGKYD---GNFYQPTVLTDVTPDMRIFREETFGPVTS--VIPAKDAEEALELAND- 379

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHYV 122
           T Y L+ A+   D   Q+      +  +G  +IND  T       PFGG      G    
Sbjct: 380 TEYGLSAAILTNDL--QRAFKLAERLESGMVHIND-PTILDEAHVPFGGVKASGFG---- 432

Query: 123 LRWATPQSIKETFVPLTEWKY 143
            R     S++E     TE K+
Sbjct: 433 -REGGEWSMEEF----TELKW 448

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase

 Score = 57.8 bits (140), Expect = 1e-10
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 8/111 (7%)

Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLE-KIMTEEIFGPVLTIFVYPDKDLDKTLKIVT 60
           + I+ GG  DE    FI+PTI+    PL+  IMTEEIFGP+L I     K ++ ++  + 
Sbjct: 313 ASIVHGGSIDEK-KLFIEPTIL-LNPPLDSDIMTEEIFGPLLPIITV--KKIEDSIAFI- 367

Query: 61  DSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           +S P  L    F  +E  ++R L   + ++G+   ND          PFGG
Sbjct: 368 NSKPKPLAIYAFTNNEKLKRRILS--ETSSGSVTFNDAIIQYACDSLPFGG 416

Length = 484

>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

 Score = 56.7 bits (137), Expect = 3e-10
 Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 6/108 (5%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           + GG Q D   G+F +PT+    +    I  EE FGP++ I  + D D+D  L+   D T
Sbjct: 357 VYGGKQVDRP-GFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRAND-T 414

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
            Y L   VF +D +      D L+  AG  ++N  +   V    PFGG
Sbjct: 415 EYGLASGVFTKDINKALYVSDKLE--AGTVFVNTYNKTDVAA--PFGG 458

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score = 56.9 bits (138), Expect = 3e-10
 Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 19/103 (18%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G++++PT+    D   +I  EEIFGPVL +  Y   D D+ ++I  DS  Y L+G V++ 
Sbjct: 344 GFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPY--DDDDEAVRIANDS-DYGLSGGVWSA 400

Query: 75  DESFQKRCLDDLKYA------AGNYYINDKSTGSVVGQQPFGG 111
           D         D  Y        G+  IN           PFGG
Sbjct: 401 DV--------DRAYRVARRIRTGSVGINGGGGYGPDA--PFGG 433

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score = 56.7 bits (137), Expect = 3e-10
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 5/93 (5%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           +  GG+  E  GY+  PT++        IM EE FGPVL +  +    L++ + +  DS 
Sbjct: 280 VALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAF--DTLEEAIAMANDSD 337

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYIN 96
            Y LT +++ ++ +   + +  LK+  G  YIN
Sbjct: 338 -YGLTSSIYTQNLNVAMKAIKGLKF--GETYIN 367

Length = 409

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score = 56.3 bits (136), Expect = 4e-10
 Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 24/142 (16%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            ++ GG+ D   G   +PT+++      K+ TEE FGPV+ I      D ++ ++I  +S
Sbjct: 328 RLLCGGERD---GALFKPTVLEDVPRDTKLSTEETFGPVVPI--IRYDDFEEAIRI-ANS 381

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAA-----GNYYINDKSTGSVVGQQPFGGTNDKAG 117
           T Y L   +F  D       L+    AA     G   +ND S+       PFGG   K  
Sbjct: 382 TDYGLQAGIFTRD-------LNVAFKAAEKLEVGGVMVND-SSAFRTDWMPFGGV--KES 431

Query: 118 GPHYVLRWATPQSIKETFVPLT 139
           G   V R   P +++E     T
Sbjct: 432 G---VGREGVPYAMEEMTEEKT 450

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score = 56.0 bits (135), Expect = 5e-10
 Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 20/154 (12%)

Query: 4   IIGGGQYDE------SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLK 57
           ++GG +           G ++ PT+    D   +I  EEIFGPVLT  V P KD ++ ++
Sbjct: 344 LVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLT--VIPFKDEEEAIE 401

Query: 58  IVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTND--- 114
              D T Y L G V+  D     R    L+  AG  ++N ++   +    PFGG      
Sbjct: 402 KAND-TRYGLAGYVWTNDVGRAHRVALALE--AGMIWVNSQNVRHL--PTPFGGVKASGI 456

Query: 115 -KAGGPHYVLRWATPQSIKETFVPLTEWKYPYMG 147
            + GG  Y   + T    K   + L     P  G
Sbjct: 457 GREGG-TYSFDFYTET--KNVALALGPHHIPKFG 487

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score = 55.8 bits (135), Expect = 5e-10
 Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 20/113 (17%)

Query: 5   IGGGQYDESCGYFIQPTIV-QTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
            GG ++ +  GYFIQPT+     D + +I  EEIFGPV  IF +  K +D+ ++   + T
Sbjct: 356 CGGKRHGDK-GYFIQPTVFSDVTDDM-RIAKEEIFGPVQQIFKF--KTIDEVIERANN-T 410

Query: 64  PYALTGAVFAEDESFQKRCLDD-LKYA----AGNYYINDKSTGSVVGQQPFGG 111
            Y L  AVF +D       +D  + ++    AG  ++N  +  S   Q PFGG
Sbjct: 411 TYGLAAAVFTKD-------IDKAITFSNALRAGTVWVNCYNVVSP--QAPFGG 454

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score = 55.8 bits (135), Expect = 7e-10
 Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 17/137 (12%)

Query: 7   GGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYA 66
           GG YD   G F +PT++    P      EEIFGPV  + V+     ++ + +  D T Y 
Sbjct: 321 GGTYD---GLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVF--DSDEEAVALAND-TEYG 374

Query: 67  LTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHYVLRWA 126
           L+  + + D        D L+   G  +IND++        PFGG      G     R+ 
Sbjct: 375 LSAGIISRDVGRAMALADRLR--TGMLHINDQTVNDEP-HNPFGGMGASGNGS----RFG 427

Query: 127 TPQSIKETFVPLTEWKY 143
            P + +E     T+W++
Sbjct: 428 GPANWEE----FTQWQW 440

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score = 55.5 bits (134), Expect = 7e-10
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 9/108 (8%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           + GG +  ++      PT++       K+ T+EIFGPV  + VY   DLD+ +    +S 
Sbjct: 331 LCGGKRLSDTT---YAPTVLLDPPRDAKVSTQEIFGPV--VCVYSYDDLDEAIAQ-ANSL 384

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           P A   AVF +D     + +  L   A    +ND  T   V   PF G
Sbjct: 385 PVAFQAAVFTKDLDVALKAVRRL--DATAVMVNDH-TAFRVDWMPFAG 429

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score = 55.1 bits (133), Expect = 9e-10
 Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           ++ GG+  E  G F +PT++        +  EE FGP+  +F +   D ++ + I  D T
Sbjct: 326 VVTGGKRHELGGNFFEPTVLSNVTADMLVSKEETFGPLAPVFKF--DDEEEVIAIAND-T 382

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
              L    F+ D S   R  + L+Y  G   IN     +VV   PFGG
Sbjct: 383 EVGLAAYFFSRDLSRIWRVAEALEY--GMVGINTGLISNVVA--PFGG 426

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score = 54.6 bits (132), Expect = 1e-09
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 13/121 (10%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
             F+ P I+   D    +  EEIFGP+L ++ Y   D D+ + +    T + L+  + ++
Sbjct: 317 TAFLSPGIIDVTD-AADVPDEEIFGPLLQVYRY--DDFDEAIALANA-TRFGLSAGLLSD 372

Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGT----NDKAGGPHYVLRW-ATPQ 129
           DE+  +R L  ++  AG    N  +TG+     PFGG     N +    +Y   + A P 
Sbjct: 373 DEALFERFLARIR--AGIVNWNRPTTGA-SSTAPFGGVGLSGNHRPSA-YYAADYCAYPV 428

Query: 130 S 130
           +
Sbjct: 429 A 429

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score = 54.9 bits (133), Expect = 1e-09
 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 10/114 (8%)

Query: 4   IIGGGQYDE---SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVT 60
           + GG +        GYF +PTI+       +I  EE+FGPVL+  V P  D ++ + +  
Sbjct: 328 LTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLS--VIPFDDEEEAIALAN 385

Query: 61  DSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTND 114
           D + Y L   ++  D +   R    ++  AG  ++N     S     PFGG  D
Sbjct: 386 D-SEYGLAAGIWTRDLARAHRVARAIE--AGTVWVNTYRALSPS--SPFGGFKD 434

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score = 54.6 bits (132), Expect = 1e-09
 Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 9/112 (8%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           +++ GG+ D +    ++PTI++   P  ++  EE+FGPV+T  V P  D D+ L  V DS
Sbjct: 327 KLLTGGKRDGAL---LEPTILEDVPPDMEVNCEEVFGPVVT--VEPYDDFDEALAAVNDS 381

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTND 114
             + L   VF  D     R  D+L+   G   IND  T   V   P+GG  D
Sbjct: 382 -KFGLQAGVFTRDLEKALRAWDELE--VGGVVINDVPTFR-VDHMPYGGVKD 429

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score = 54.7 bits (132), Expect = 1e-09
 Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 7/98 (7%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           GYFI PT+        +I  EEIFGPVL   V      D+ + +  DS  Y L  AV + 
Sbjct: 341 GYFIAPTVFADVPTDSRIWREEIFGPVLC--VRSFATEDEAIALANDSE-YGLAAAVISR 397

Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGT 112
           D     R  + L+  AG  +IN   +     Q P+GG 
Sbjct: 398 DAERCDRVAEALE--AGIVWIN--CSQPCFPQAPWGGY 431

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score = 53.7 bits (129), Expect = 4e-09
 Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 11/110 (10%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           +  GG    S GY+IQPT+         I  +EIFGPV +I  +  KDLD+ ++   ++T
Sbjct: 404 LECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKF--KDLDEVIR-RANNT 460

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYIN--DKSTGSVVGQQPFGG 111
            Y L   VF ++          L+   G  ++N  D    ++    PFGG
Sbjct: 461 RYGLAAGVFTQNLDTANTLSRALR--VGTVWVNCFDVFDAAI----PFGG 504

Length = 538

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score = 53.3 bits (129), Expect = 4e-09
 Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 14/118 (11%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           ++GG   +   G  + PTI+    P   I +EE FGPV++I     KD ++ ++I  DS 
Sbjct: 305 VVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRV--KDEEEAVRIANDSE 362

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVG---QQPFGGTNDKAGG 118
            Y L+ AVF  D +        ++   G  +IN    G  V      P GG   K+ G
Sbjct: 363 -YGLSAAVFTRDLARALAVAKRIES--GAVHIN----GMTVHDEPTLPHGGV--KSSG 411

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like

 Score = 52.9 bits (128), Expect = 5e-09
 Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 11/95 (11%)

Query: 20  PTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST-PYALTGAVFAEDESF 78
           PT+V       ++M EEIFGP+L I  Y    LD+ +  +     P AL    F ED++ 
Sbjct: 322 PTLVLNVTDDMRVMQEEIFGPILPILTY--DSLDEAIDYINARPRPLALY--YFGEDKAE 377

Query: 79  QKRCLDDLKYAAGNYYINDKSTGSVVGQ--QPFGG 111
           Q R L   +  +G   IND  T   V Q   PFGG
Sbjct: 378 QDRVLR--RTHSGGVTIND--TLLHVAQDDLPFGG 408

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score = 52.4 bits (126), Expect = 8e-09
 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G+F+QPTI    D   ++  EEIFGPVL     P KD D+ + +  DS  Y L   V+  
Sbjct: 341 GFFVQPTIFSGVDNEWRLAREEIFGPVLC--AIPWKDEDEVIAMANDS-HYGLAAYVWTR 397

Query: 75  D 75
           D
Sbjct: 398 D 398

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score = 52.5 bits (126), Expect = 9e-09
 Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 11/110 (10%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           +I GG    S GY+IQPTI        KI  +EIFGPV +I  +  K +D+ +K   +++
Sbjct: 350 LITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKF--KTVDEVIK-RANNS 406

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYIN--DKSTGSVVGQQPFGG 111
            Y L   VF+++          LK  AG  ++N  D    S+    PFGG
Sbjct: 407 KYGLAAGVFSKNIDTANTLSRALK--AGTVWVNCYDVFDASI----PFGG 450

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score = 51.6 bits (124), Expect = 2e-08
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 5/92 (5%)

Query: 6   GGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPY 65
           G      + G F++PT+++  DP   I+ EEIFGPVLT+  + D+   + + +  D+  Y
Sbjct: 331 GPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDE--AEAVALANDTD-Y 387

Query: 66  ALTGAVFAEDESFQKRCLDDLKYAAGNYYIND 97
            L  +V+  D +   R    ++  AG  +IND
Sbjct: 388 GLAASVWTRDLARAMRVARAIR--AGTVWIND 417

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score = 50.0 bits (120), Expect = 7e-08
 Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 20/104 (19%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G  ++PT++       +I  EEIFGPV  I      D ++ L++  D T Y L+GAVF  
Sbjct: 347 GNVLEPTVLSDVTNDMEIAREEIFGPVAPII--KADDEEEALELAND-TEYGLSGAVFTS 403

Query: 75  D----ESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQP---FGG 111
           D      F +R +D     AG  +IND+     V  +P   FGG
Sbjct: 404 DLERGVQFARR-ID-----AGMTHINDQP----VNDEPHVPFGG 437

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 49.9 bits (119), Expect = 7e-08
 Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 7/101 (6%)

Query: 18  IQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES 77
           I PTI    DP   +  EEIFGPVL +  +     ++ L++  DS  Y L  AV+  D S
Sbjct: 379 IGPTIFVDVDPNASLSREEIFGPVLVVTRF--TSEEQALQLANDSQ-YGLGAAVWTRDLS 435

Query: 78  FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
              R    LK  AG+ ++N+ + G +    PFGG      G
Sbjct: 436 RAHRMSRRLK--AGSVFVNNYNDGDMT--VPFGGYKQSGNG 472

Length = 494

>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member

 Score = 48.7 bits (116), Expect = 2e-07
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 5/116 (4%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           +I+ GG   ES G F+QPTIV+   P   ++ EE+FGPVL +  +  K L++ ++I  +S
Sbjct: 364 KILTGGSAIESEGNFVQPTIVEIS-PDADVVKEELFGPVLYVMKF--KTLEEAIEI-NNS 419

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
            P  L+ ++F  +     + +  L    G   +N  + G+ +G   FGG     GG
Sbjct: 420 VPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGA-FGGEKATGGG 474

Length = 508

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score = 48.7 bits (117), Expect = 2e-07
 Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 16/114 (14%)

Query: 4   IIGGGQYDE---SCGYFIQPTI-VQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIV 59
           + GG +  E   + G F+ PT+     D +  I+ EEIFGPV+++  + D+D     +++
Sbjct: 350 LCGGERLTEGGFANGAFVAPTVFTDCTDDM-TIVREEIFGPVMSVLTFDDED-----EVI 403

Query: 60  T--DSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
              + T Y L   VF  D S   R +  L+  AG  +IN  + G    + P GG
Sbjct: 404 ARANDTEYGLAAGVFTADLSRAHRVIHQLE--AGICWIN--TWGESPAEMPVGG 453

Length = 488

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score = 48.2 bits (115), Expect = 3e-07
 Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 9/112 (8%)

Query: 3   EIIGGGQYDESC--GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVT 60
            I+ GG+  E    G+FI+PTI+       +I  EE+FGPVL +  +  +  D+ +++  
Sbjct: 358 TILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTE--DEAIELAN 415

Query: 61  DSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGT 112
           DS  Y L GAV + D    +R  +  +  AG  +IN   +     Q P+GG 
Sbjct: 416 DSH-YGLAGAVISNDLERCERVSEAFQ--AGIVWIN--CSQPCFCQAPWGGI 462

Length = 503

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 17/101 (16%)

Query: 5   IGGGQYDESC--GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           I G  + E    G ++ PT++   D   ++M EE FGPV+ I     K   + + ++ DS
Sbjct: 325 IDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGI--MKVKSDAEAIALMNDS 382

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSV 103
             Y LT +V+ +D             A          TG+V
Sbjct: 383 -EYGLTASVWTKDI------------ARAEALGEQLETGTV 410

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score = 47.6 bits (114), Expect = 4e-07
 Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 5/95 (5%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            ++ GG+  +  GY+ +PT++      ++I+  E+FGPV++  V P  D D+ ++   DS
Sbjct: 345 RVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVS--VTPFDDEDQAVRWANDS 402

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYIND 97
             Y L  +V+  D     R    L+Y  G  ++N 
Sbjct: 403 -DYGLASSVWTRDVGRAHRVSARLQY--GCTWVNT 434

Length = 475

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score = 47.7 bits (113), Expect = 4e-07
 Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           +I GG+  +  GY+  PT++      + I+ +E+FGPV++I  + D+  ++ +    DS 
Sbjct: 345 VITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDE--EQVVNWANDSQ 402

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
            Y L  +V+ +D     R    L+Y  G  ++N      +V + P GG
Sbjct: 403 -YGLASSVWTKDVGRAHRLSARLQY--GCTWVNTHFM--LVSEMPHGG 445

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score = 47.3 bits (113), Expect = 4e-07
 Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 16/126 (12%)

Query: 16  YFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAED 75
           YF +PT++       ++  EE FGPV  + +Y   D D+ +++  D T Y L  +V+  D
Sbjct: 337 YFYEPTVLTGVTEDMELFAEETFGPV--VSIYRVADDDEAIELAND-TDYGLNASVWTRD 393

Query: 76  ESFQKRCLDDLKYAAGNYYIND---KSTGSVVGQQPFGGTNDKAG-----GPHYVLRWAT 127
            +  +R    L+  AG   +N+    +  S+    P GG  D +G     G   +L++  
Sbjct: 394 GARGRRIAARLR--AGTVNVNEGYAAAWASI--DAPMGGMKD-SGLGRRHGAEGLLKYTE 448

Query: 128 PQSIKE 133
            Q++  
Sbjct: 449 TQTVAV 454

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score = 47.0 bits (112), Expect = 6e-07
 Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 9/112 (8%)

Query: 7   GGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYA 66
           G Q     G    PT++    P  +++TEE FGPV  +     KDLD+ + I  +ST Y 
Sbjct: 329 GNQRQ---GALYAPTVLDHVPPDAELVTEETFGPVAPV--IRVKDLDEAIAIS-NSTAYG 382

Query: 67  LTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
           L+  V   D    KR ++ L     N  +N+   G      PFGG  D   G
Sbjct: 383 LSSGVCTNDLDTIKRLVERLDVGTVN--VNE-VPGFRSELSPFGGVKDSGLG 431

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score = 46.4 bits (111), Expect = 9e-07
 Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 24/109 (22%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G F+ PTI+    P  KI  EEIFGPVL+I V  D  LD+ + I+  + PY    A+F  
Sbjct: 358 GNFVGPTILDNVTPDMKIYKEEIFGPVLSI-VRVD-TLDEAIAIINAN-PYGNGAAIFTR 414

Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSV---------VGQQPFGGTND 114
                         AA   +  +   G V         +    FGG   
Sbjct: 415 SG------------AAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKG 451

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 8/78 (10%)

Query: 2   SEIIGGGQY----DESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLK 57
           +E++ GG+         G +  PT  +  + + +I  EEIFGPVL +  +  KD ++ L+
Sbjct: 346 AEVLTGGERNELGGLLGGGYYVPTTFKGGNKM-RIFQEEIFGPVLAVTTF--KDEEEALE 402

Query: 58  IVTDSTPYALTGAVFAED 75
           I  D T Y L   V+  D
Sbjct: 403 IAND-TLYGLGAGVWTRD 419

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 17/133 (12%)

Query: 16  YFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAED 75
            F +PT++    P  ++  EE FGPV+   VYP  D+D+ ++   D TPY L  +V+  D
Sbjct: 373 LFYEPTVLTGVTPDMELAREETFGPVV--SVYPVADVDEAVERAND-TPYGLNASVWTGD 429

Query: 76  ESFQKRCLDDLKYAAGNYYINDKST---GSVVGQQPFGGTNDKAG-----GPHYVLRWAT 127
            +  +     ++  AG   +N+      GSV    P GG  D +G     G   +L++  
Sbjct: 430 TARGRAIAARIR--AGTVNVNEGYAAAWGSV--DAPMGGMKD-SGLGRRHGAEGLLKYTE 484

Query: 128 PQSIKET-FVPLT 139
            Q+I     +PL 
Sbjct: 485 SQTIATQRVLPLA 497

Length = 524

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score = 43.3 bits (102), Expect = 1e-05
 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 24/113 (21%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G    PT++   DP   ++ EE FGPV  +  +   D+D  ++I ++ST Y L+  V   
Sbjct: 353 GALYAPTVLDRVDPSMTLVREETFGPVSPVIRFC--DIDDAIRI-SNSTAYGLSSGV--- 406

Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSV---------VGQQPFGGTNDKAGG 118
                  C + L Y     +I +   G+V         +   PFGG  D   G
Sbjct: 407 -------CTNRLDYIT--RFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLG 450

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 23/123 (18%)

Query: 7   GGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYA 66
           G       G ++QPTI        +++TEEIFGP   I   P    ++ + +  D TPY 
Sbjct: 358 GDALAG--GAWVQPTIWTGLPDSARVVTEEIFGPCCHI--APFDSEEEVIALAND-TPYG 412

Query: 67  LTGAVFAEDESFQKRCLDDLKYAAGNYYIN-----DKSTGSVVGQQPFGGTN----DKAG 117
           L  +V+ ED S   R    ++   G  ++N     D  T       PFGG+      + G
Sbjct: 413 LAASVWTEDLSRAHRVARQME--VGIVWVNSWFLRDLRT-------PFGGSKLSGIGREG 463

Query: 118 GPH 120
           G H
Sbjct: 464 GVH 466

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 8/116 (6%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            ++ GG  +   G  I PT++    P  ++  EE FGPVL I      D+++ +++   S
Sbjct: 346 TVLNGGGREG--GNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRV--NDIEEAIELANKS 401

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
             Y L  ++F +D +  ++  D L+   G   IN K         PF G  D   G
Sbjct: 402 -NYGLQASIFTKDINKARKLADALE--VGTVNINSKCQRG-PDHFPFLGRKDSGIG 453

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 4/73 (5%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            ++ GG+  +  G +++PTIV+       I+ EE F P+L +  +    L++ +    + 
Sbjct: 342 TVLFGGKVIDGPGNYVEPTIVEGLSDAP-IVKEETFAPILYVLKF--DTLEEAIAW-NNE 397

Query: 63  TPYALTGAVFAED 75
            P  L+ ++F  D
Sbjct: 398 VPQGLSSSIFTTD 410

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score = 41.0 bits (96), Expect = 8e-05
 Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 11/118 (9%)

Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           + ++ GG+  E  G F QPTI+       K+  EE FGP+  +F +  KD    +    D
Sbjct: 352 ARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRF--KDEADVIAQAND 409

Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQ-QPFGGTNDKAGG 118
            T + L    +A D S   R  + L+Y  G   IN   TG +  +  PFGG   KA G
Sbjct: 410 -TEFGLAAYFYARDLSRVFRVGEALEY--GIVGIN---TGIISNEVAPFGGI--KASG 459

Length = 482

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score = 40.8 bits (96), Expect = 9e-05
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 17/121 (14%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTI--FVYPDKDLDKTLKIVTDSTPYALTGAVF 72
           G F  PT+     P  +I  EEIFGPVL +  F    + +      + ++TPY L  +V+
Sbjct: 365 GPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVA-----LANNTPYGLAASVW 419

Query: 73  AEDESFQKRCLD-DLKYAAGNYYINDKSTGSVVGQQPFGGTND----KAGGPHYVLRWAT 127
           +E+ S     L+  L   AG  +IN            FGG  +    + GG   +  +  
Sbjct: 420 SENLS---LALEVALSLKAGVVWIN--GHNLFDAAAGFGGYRESGFGREGGKEGLYEYLR 474

Query: 128 P 128
           P
Sbjct: 475 P 475

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 8/120 (6%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEK-IMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           +I+ GG+ D      I PTI+    PL+  IM+EEIFGP+L I      +L+++  ++  
Sbjct: 315 KIVYGGEKDRE-NLKIAPTIL-LDVPLDSLIMSEEIFGPLLPILTL--NNLEESFDVIR- 369

Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHY 121
           S P  L   +F  ++  ++R    +  +AG   +ND +    +   PFGG  +   G ++
Sbjct: 370 SRPKPLAAYLFTHNKKLKERFAATV--SAGGIVVNDIAVHLALHTLPFGGVGESGMGAYH 427

Length = 484

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 9/104 (8%)

Query: 17  FIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDE 76
            + P I+     + ++  EE FGP+L +  Y   D D+ + I  + T + L+  + ++D 
Sbjct: 355 LLTPGIIDVTG-VAELPDEEHFGPLLQVIRY--DDFDEAIAIANN-TRFGLSAGLLSDDR 410

Query: 77  SFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPH 120
               R L +++  AG    N   TG+     PFGG    A G H
Sbjct: 411 ELYDRFLLEIR--AGIVNWNKPLTGA-SSAAPFGGIG--ASGNH 449

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score = 39.9 bits (93), Expect = 2e-04
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G ++ PT+++   P  K   EEIFGPVL   V     L++ + ++  S PY    A+F  
Sbjct: 357 GNWVGPTLLERVPPTMKAYQEEIFGPVLC--VLEADTLEEAIALINAS-PYGNGTAIFTR 413

Query: 75  D 75
           D
Sbjct: 414 D 414

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 7/106 (6%)

Query: 7   GGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYA 66
           GG+     G F +PT++        I  EE+FGPV  +  +  K  ++ + I  D+    
Sbjct: 371 GGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRF--KTEEEAIAIANDTE-AG 427

Query: 67  LTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGT 112
           L   +F  D     R  + L+Y  G   +N+    + V   PFGG 
Sbjct: 428 LAAYIFTRDLQRAWRVSEALEY--GIVGVNEGLISTEVA--PFGGV 469

Length = 498

>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional

 Score = 39.5 bits (92), Expect = 3e-04
 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 8/111 (7%)

Query: 7   GGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYA 66
           GG+     G +  PT++    P      EE+FGPV  I V   KD +  L++  DS  + 
Sbjct: 336 GGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITV--AKDAEHALELANDSE-FG 392

Query: 67  LTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAG 117
           L+  +F  DE+  ++    L+   G  +IN         +  FGG   K+G
Sbjct: 393 LSATIFTTDETQARQMAARLE--CGGVFINGYCASD--ARVAFGGVK-KSG 438

Length = 462

>gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase

 Score = 38.3 bits (90), Expect = 6e-04
 Identities = 33/144 (22%), Positives = 49/144 (34%), Gaps = 24/144 (16%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQT------KDPLEKIMTEEIFGPVLTIFVYPDKDLDKTL 56
            + GG   +        PT+ +        DP    + EE+FGP   +  Y D      L
Sbjct: 316 VLAGGAAAEGGNQA--APTLFKVDAAAFLADPA---LQEEVFGPASLVVRYDDAA---EL 367

Query: 57  KIVTDSTPYALTGAVFAE--DESFQKRCLDDLKYAAGNYYINDKSTGSVVG--QQ---PF 109
             V ++    LT  +  E  D +  +  L  L+  AG    N   TG  V        P+
Sbjct: 368 LAVAEALEGQLTATIHGEEDDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPY 427

Query: 110 GGTNDKAG---GPHYVLRWATPQS 130
             T D      G   + R+  P  
Sbjct: 428 PATTDPRFTSVGTAAIERFLRPVC 451

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score = 38.3 bits (89), Expect = 7e-04
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           GY+I+PTI        KI  +EIFGPV+++  +  K +++ +K   + T Y L   +  +
Sbjct: 378 GYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKF--KTVEEAIKKANN-TKYGLAAGIVTK 434

Query: 75  D 75
           D
Sbjct: 435 D 435

Length = 501

>gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase

 Score = 36.1 bits (84), Expect = 0.004
 Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 9/58 (15%)

Query: 3   EIIGGGQ-------YDESCGYFIQPTIVQTKDPLEK--IMTEEIFGPVLTIFVYPDKD 51
           E++ GG         D   G F  PT++   DP     +   E FGPV T+  Y    
Sbjct: 355 EVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLA 412

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	147
PLN02174	484	aldehyde dehydrogenase family 3 member H1	100.0
TIGR01236	533	D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy	100.0
PTZ00381	493	aldehyde dehydrogenase family protein; Provisional	99.98
KOG2450|consensus	501		99.97
PLN02203	484	aldehyde dehydrogenase	99.97
PRK11241	482	gabD succinate-semialdehyde dehydrogenase I; Provi	99.97
cd07123	522	ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate	99.97
cd07140	486	ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge	99.97
COG1012	472	PutA NAD-dependent aldehyde dehydrogenases [Energy	99.97
cd07136	449	ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr	99.97
PLN02766	501	coniferyl-aldehyde dehydrogenase	99.97
TIGR03374	472	ABALDH 1-pyrroline dehydrogenase. Members of this	99.97
PLN02419	604	methylmalonate-semialdehyde dehydrogenase [acylati	99.97
KOG2455|consensus	561		99.97
KOG2456|consensus	477		99.97
PLN02278	498	succinic semialdehyde dehydrogenase	99.97
PRK10090	409	aldehyde dehydrogenase A; Provisional	99.97
cd07132	443	ALDH_F3AB Aldehyde dehydrogenase family 3 members	99.97
cd07141	481	ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro	99.96
TIGR01780	448	SSADH succinate-semialdehyde dehydrogenase. SSADH	99.96
cd07099	453	ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di	99.96
PLN02466	538	aldehyde dehydrogenase family 2 member	99.96
PRK09406	457	gabD1 succinic semialdehyde dehydrogenase; Reviewe	99.96
TIGR03216	481	OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy	99.96
cd07113	477	ALDH_PADH_NahF Escherichia coli NAD+-dependent phe	99.96
PRK13473	475	gamma-aminobutyraldehyde dehydrogenase; Provisiona	99.96
PRK13968	462	putative succinate semialdehyde dehydrogenase; Pro	99.96
PLN02315	508	aldehyde dehydrogenase family 7 member	99.96
cd07124	512	ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl	99.96
cd07107	456	ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde	99.96
cd07133	434	ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l	99.96
cd07117	475	ALDH_StaphAldA1 Uncharacterized Staphylococcus aur	99.96
cd07106	446	ALDH_AldA-AAD23400 Streptomyces aureofaciens putat	99.96
cd07142	476	ALDH_F2BC Arabidosis aldehyde dehydrogenase family	99.96
PRK13252	488	betaine aldehyde dehydrogenase; Provisional	99.96
cd07083	500	ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-	99.96
cd07101	454	ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi	99.96
cd07559	480	ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep	99.96
PRK03137	514	1-pyrroline-5-carboxylate dehydrogenase; Provision	99.96
cd07137	432	ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m	99.96
cd07085	478	ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog	99.96
cd07094	453	ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende	99.96
cd07086	478	ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip	99.96
TIGR01237	511	D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy	99.96
cd07130	474	ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se	99.96
TIGR03250	472	PhnAcAld_DH putative phosphonoacetaldehyde dehydro	99.96
cd07134	433	ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro	99.96
TIGR02299	488	HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd	99.96
cd07143	481	ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh	99.96
cd07116	479	ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen	99.96
cd07091	476	ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families	99.96
cd07097	473	ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent	99.96
cd07151	465	ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd	99.96
cd07100	429	ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi	99.96
cd07144	484	ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd	99.96
PLN00412	496	NADP-dependent glyceraldehyde-3-phosphate dehydrog	99.96
PRK09407	524	gabD2 succinic semialdehyde dehydrogenase; Reviewe	99.96
cd07092	450	ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g	99.96
cd07119	482	ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be	99.96
cd07147	452	ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1	99.96
cd07139	471	ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy	99.96
cd07131	478	ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen	99.96
cd07105	432	ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l	99.96
cd07152	443	ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen	99.96
cd07135	436	ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde	99.96
cd07115	453	ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy	99.96
cd07089	459	ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric	99.96
cd07090	457	ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty	99.96
cd07110	456	ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro	99.96
cd07102	452	ALDH_EDX86601 Uncharacterized aldehyde dehydrogena	99.96
cd07098	465	ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and	99.96
cd07118	454	ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr	99.96
cd07088	468	ALDH_LactADH-AldA Escherichia coli lactaldehyde de	99.96
PLN02467	503	betaine aldehyde dehydrogenase	99.96
cd07120	455	ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh	99.95
PRK09847	494	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen	99.95
PF00171	462	Aldedh: Aldehyde dehydrogenase family; InterPro: I	99.95
cd07145	456	ALDH_LactADH_F420-Bios Methanocaldococcus jannasch	99.95
cd07109	454	ALDH_AAS00426 Uncharacterized Saccharopolyspora sp	99.95
cd07146	451	ALDH_PhpJ Streptomyces putative phosphonoformaldeh	99.95
cd07148	455	ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si	99.95
cd07108	457	ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a	99.95
cd07150	451	ALDH_VaniDH_like Pseudomonas putida vanillin dehyd	99.95
cd07104	431	ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen	99.95
cd07125	518	ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d	99.95
cd07112	462	ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent	99.95
cd07114	457	ALDH_DhaS Uncharacterized Candidatus pelagibacter	99.95
TIGR01804	467	BADH glycine betaine aldehyde dehydrogenase. Betai	99.95
cd07103	451	ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald	99.95
TIGR01722	477	MMSDH methylmalonic acid semialdehyde dehydrogenas	99.95
cd07087	426	ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl	99.95
cd07111	480	ALDH_F16 Aldehyde dehydrogenase family 16A1-like.	99.95
cd07138	466	ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac	99.95
cd07149	453	ALDH_y4uC Uncharacterized ALDH (y4uC) with similar	99.95
PRK09457	487	astD succinylglutamic semialdehyde dehydrogenase;	99.95
cd07128	513	ALDH_MaoC-N N-terminal domain of the monoamine oxi	99.95
cd07082	473	ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat	99.95
KOG2451|consensus	503		99.95
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	99.95
TIGR03240	484	arg_catab_astD succinylglutamic semialdehyde dehyd	99.95
cd07093	455	ALDH_F8_HMSADH Human aldehyde dehydrogenase family	99.95
cd07095	431	ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde	99.95
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	99.94
PRK11903	521	aldehyde dehydrogenase; Provisional	99.94
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	99.94
cd07078	432	ALDH NAD(P)+ dependent aldehyde dehydrogenase fami	99.94
cd07084	442	ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent	99.93
cd07129	454	ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr	99.93
TIGR01238	500	D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy	99.93
KOG2454|consensus	583		99.92
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	99.92
KOG2452|consensus	881		99.92
cd07126	489	ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de	99.92
PRK11809	1318	putA trifunctional transcriptional regulator/proli	99.91
cd07079	406	ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu	99.9
cd07121	429	ALDH_EutE Ethanolamine utilization protein EutE-li	99.9
PRK00197	417	proA gamma-glutamyl phosphate reductase; Provision	99.9
PLN02418	718	delta-1-pyrroline-5-carboxylate synthase	99.88
PRK15398	465	aldehyde dehydrogenase EutE; Provisional	99.87
KOG2453|consensus	507		99.86
cd06534	367	ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s	99.86
TIGR01092	715	P5CS delta l-pyrroline-5-carboxylate synthetase. T	99.86
cd07077	397	ALDH-like NAD(P)+-dependent aldehyde dehydrogenase	99.82
cd07081	439	ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh	99.81
cd07127	549	ALDH_PAD-PaaZ Phenylacetic acid degradation protei	99.8
PRK13805	862	bifunctional acetaldehyde-CoA/alcohol dehydrogenas	99.79
TIGR02288	551	PaaN_2 phenylacetic acid degradation protein paaN.	99.77
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	99.74
TIGR00407	398	proA gamma-glutamyl phosphate reductase. The prosi	99.73
TIGR02518	488	EutH_ACDH acetaldehyde dehydrogenase (acetylating)	99.65
cd07122	436	ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr	99.64
KOG2449|consensus	157		99.47
COG0014	417	ProA Gamma-glutamyl phosphate reductase [Amino aci	98.27
KOG4165|consensus	433		96.12
PF07368	215	DUF1487: Protein of unknown function (DUF1487); In	93.5

>PLN02174 aldehyde dehydrogenase family 3 member H1

Probab=100.00  E-value=7.9e-33  Score=232.32  Aligned_cols=139  Identities=25%  Similarity=0.431  Sum_probs=123.3

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|  .||||+++ |+++|||++||||+|.+++.+
T Consensus       314 a~~~~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~~eai~~a-N~~~~gLaa~vft~d~~~a~~  389 (484)
T PLN02174        314 DKIVYGGEKD-RENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNN--LEESFDVI-RSRPKPLAAYLFTHNKKLKER  389 (484)
T ss_pred             CEEEECCCcC-CCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCC--HHHHHHHH-hCCCCCeEEEEEcCCHHHHHH
Confidence            5789999654 3589999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe-cCCCCcCCCCCC
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET-FVPLTEWKYPYM  146 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~-~~~~~~~~~p~~  146 (147)
                      +++++  ++|.|+||+...+...+.+||||    |.|+++|.+++++|++.|+|+.+ .+.+.+++||+.
T Consensus       390 ~~~~l--~aG~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~~~~~~~~~pp~  457 (484)
T PLN02174        390 FAATV--SAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSLFGDSAVRYPPY  457 (484)
T ss_pred             HHHcC--CcceEEECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEECCccCcccccCCCC
Confidence            99986  99999999987654346789999    77889999999999999999855 345678999764

>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

Probab=100.00  E-value=6.4e-32  Score=229.28  Aligned_cols=146  Identities=56%  Similarity=1.050  Sum_probs=128.2

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..+...|+|++|||+.+++++|++++||+||||++|++|+++++||||++++|+++|||+++|||+|.+++.+
T Consensus       383 a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~  462 (533)
T TIGR01236       383 LTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILE  462 (533)
T ss_pred             eEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHH
Confidence            68999997644468999999999999999999999999999999999854699999995578999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceeceEEEecCCCCcCCCCCCC
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQSIKETFVPLTEWKYPYMG  147 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~v~~~~~~~~~~~~p~~~  147 (147)
                      +++.+++++|.|+||+...+...+.+||||    |.| +.+|.+++++|++.|+++....+...|-||.|.
T Consensus       463 ~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~~~~~~~~~~~~~~  533 (533)
T TIGR01236       463 ADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGGPLNLLRWTSARSIKETFVPLTDWSYPHMA  533 (533)
T ss_pred             HHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhcceEEEEEEccccccccCcccC
Confidence            999863359999999877655446789999    555 788999999999999999888888899999873

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.

>PTZ00381 aldehyde dehydrogenase family protein; Provisional

Probab=99.98  E-value=7.3e-32  Score=227.14  Aligned_cols=139  Identities=27%  Similarity=0.453  Sum_probs=123.3

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      +++++||..+. .++|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||++||||+|.+.+.+
T Consensus       308 a~~~~gG~~~~-~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~~-n~~~~gLa~~vft~d~~~~~~  383 (493)
T PTZ00381        308 GKVVYGGEVDI-ENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYEN--IDEVLEFI-NSRPKPLALYYFGEDKRHKEL  383 (493)
T ss_pred             CcEEECCCcCC-CCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCC--HHHHHHHH-hcCCCCceEEEECCCHHHHHH
Confidence            57888987643 578999999999999999999999999999999998  79999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEec---CCCCcCCCCCC
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETF---VPLTEWKYPYM  146 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~---~~~~~~~~p~~  146 (147)
                      +++.+  ++|.|+||+...+...+.+||||    |.|+.+|.+++++|++.|++..+.   +.+.+++||+.
T Consensus       384 ~~~~~--~sG~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~~~~~~~~~~~~pp~  453 (493)
T PTZ00381        384 VLENT--SSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKSTGNSFDLSLRYPPY  453 (493)
T ss_pred             HHHhC--CcceEEECCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEccccccCcccccCCCC
Confidence            99976  99999999987665557899999    778899999999999999998653   34568889764

>KOG2450|consensus

Probab=99.97  E-value=4.2e-32  Score=223.87  Aligned_cols=127  Identities=27%  Similarity=0.457  Sum_probs=118.4

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |+++|||.+..+.|||++|||+.+|.++|+|++||+||||+.|++|++  .||+|++| |++.|||+++|||+|.+++.+
T Consensus       366 a~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t--~eE~i~~A-N~t~yGLAa~V~t~dl~~a~~  442 (501)
T KOG2450|consen  366 ATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKT--EEEVIERA-NNTTYGLAAGVFTKDLDKAHR  442 (501)
T ss_pred             CEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCc--HHHHHHHh-cCCcccceeeEeccChHHHHH
Confidence            789999977667899999999999999999999999999999999999  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEec
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETF  135 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~  135 (147)
                      +++.+  ++|+||||++...  ...+||||    |.|++.|.+++..|++.|+|+++.
T Consensus       443 va~~l--~aGtVwiN~y~~~--~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~~  496 (501)
T KOG2450|consen  443 VANAL--QAGTVWINCYNVF--DAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVKL  496 (501)
T ss_pred             HHHHh--cCceEEEeccccc--cccCCccccccccCCccccHHHHhhcceeeEEEEeC
Confidence            99986  9999999999764  46899999    889999999999999999998663

>PLN02203 aldehyde dehydrogenase

Probab=99.97  E-value=6.7e-31  Score=220.84  Aligned_cols=139  Identities=27%  Similarity=0.479  Sum_probs=122.2

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      +++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||++||||+|.+++.+
T Consensus       313 ~~~~~gg~~~-~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~--~~eai~~a-N~~~~gL~a~vft~d~~~a~~  388 (484)
T PLN02203        313 ASIVHGGSID-EKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKK--IEDSIAFI-NSKPKPLAIYAFTNNEKLKRR  388 (484)
T ss_pred             CeEEeCCCcC-CCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCC--HHHHHHHH-hCCCCCceEEEEcCCHHHHHH
Confidence            5688898753 3689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEec-CCCCcCCCCCC
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETF-VPLTEWKYPYM  146 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~-~~~~~~~~p~~  146 (147)
                      +++.+  ++|.|+||+...+...+.+||||    |.|+.+|.+++++|++.|+++... +.+.++|||+.
T Consensus       389 ~~~~l--~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~p~  456 (484)
T PLN02203        389 ILSET--SSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRSLLTEFEFRYPPW  456 (484)
T ss_pred             HHHhC--CcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcCccCcccccCCCC
Confidence            99986  99999999986544446789999    778899999999999999998552 24678888764

>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional

Probab=99.97  E-value=6.3e-31  Score=220.96  Aligned_cols=125  Identities=26%  Similarity=0.365  Sum_probs=113.5

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..+..+|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||++||||+|.+++.+
T Consensus       352 a~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~--~~eai~~a-N~s~~GL~a~Vft~d~~~a~~  428 (482)
T PRK11241        352 ARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKD--EADVIAQA-NDTEFGLAAYFYARDLSRVFR  428 (482)
T ss_pred             CEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCC--HHHHHHHh-hCCCCCceEEEEcCCHHHHHH
Confidence            689999975433689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      +.+.+  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|+++.
T Consensus       429 ~~~~l--~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~  480 (482)
T PRK11241        429 VGEAL--EYGIVGINTGIIS--NEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI  480 (482)
T ss_pred             HHHHc--CccEEEECCCCCC--CCCCCcCCccccccCcccHHHHHHHhhcceEEEE
Confidence            99986  9999999987653  34689999    7788999999999999999864

>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

Probab=99.97  E-value=1.1e-30  Score=221.31  Aligned_cols=133  Identities=61%  Similarity=1.113  Sum_probs=116.5

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCC-CccEEEEEcCCHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTP-YALTGAVFAEDESFQK   80 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~-~gL~~~vft~d~~~~~   80 (147)
                      |++++||..+...|+|++||||.+++++|++++||+||||++|++|+++++||||+++ |+++ |||++||||+|.+++.
T Consensus       382 a~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~a-N~~~~~gL~a~Vft~d~~~~~  460 (522)
T cd07123         382 AEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELV-DTTSPYALTGAIFAQDRKAIR  460 (522)
T ss_pred             CEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEEEeCCCCHHHHHHHH-hCCCCcCceEEEEeCCHHHHH
Confidence            6899999754446899999999999999999999999999999999975589999999 9985 9999999999999999


Q ss_pred             HHHhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceeceEEEec
Q psy1961          81 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQSIKETF  135 (147)
Q Consensus        81 ~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~v~~~~  135 (147)
                      ++++.+++++|.|+||+...+...+.+||||    |.| +++|.+++++|++.|++++..
T Consensus       461 ~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~~l~~~~~~k~~~~~~  520 (522)
T cd07123         461 EATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPLNLLRWVSPRTIKETF  520 (522)
T ss_pred             HHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHHHHHHhcceEEEEEec
Confidence            9999753469999999987655445789999    554 788999999999999997654

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.

>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

Probab=99.97  E-value=1.3e-30  Score=219.25  Aligned_cols=127  Identities=27%  Similarity=0.459  Sum_probs=114.2

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+.+++++|++++||+||||++|++|++++++|||+++ |+++|||++||||+|.+++.+
T Consensus       354 a~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a-N~~~~gL~a~vft~d~~~a~~  432 (486)
T cd07140         354 ATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRA-NDTEYGLASGVFTKDINKALY  432 (486)
T ss_pred             CEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHHHHHHHH-hCCCcCceEEEECCCHHHHHH
Confidence            6899999754446899999999999999999999999999999999853479999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      +++.+  ++|.|+||+...  ..+.+||||    |.|+.+|.+++++|++.|+++.
T Consensus       433 ~~~~l--~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~  484 (486)
T cd07140         433 VSDKL--EAGTVFVNTYNK--TDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVTI  484 (486)
T ss_pred             HHHhC--CcceEEECCCCC--CCCCCCcCCcccCcCCCcchHHHHHHhhcEEEEEE
Confidence            99986  999999999654  345789999    7788999999999999999874

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.

>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

Probab=99.97  E-value=2.3e-30  Score=216.95  Aligned_cols=126  Identities=31%  Similarity=0.584  Sum_probs=112.4

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      +++++||. ... |+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|..++.+
T Consensus       339 ~~~~~Gg~-~~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~--~dEAi~lA-N~t~yGL~a~v~t~d~~~~~~  413 (472)
T COG1012         339 ARLLAGGK-RPG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKD--EEEAIELA-NDTEYGLAAAIFTRDLARAFR  413 (472)
T ss_pred             CEEEeCCc-CCC-CeEECCEEEecCCCCChhhhccccCCceEEEEeCC--HHHHHHHH-hCCCCCceEEEEcCCHHHHHH
Confidence            46778887 333 89999999999999999999999999999999998  69999999 999999999999999988888


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++++  ++|+|+||+...+.....+||||    |.|+.+|.+++++|++.|++...
T Consensus       414 ~~~~l--~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~  468 (472)
T COG1012         414 VARRL--EAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIK  468 (472)
T ss_pred             HHhcC--CeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEe
Confidence            88875  99999999986444456799999    66788899999999999999755

>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like

Probab=99.97  E-value=2.8e-30  Score=215.45  Aligned_cols=139  Identities=30%  Similarity=0.465  Sum_probs=121.9

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..+. +|+|++|||+.+++++|.+++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       297 a~~~~gG~~~~-~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~--~~eai~~a-N~~~~gL~a~v~t~d~~~a~~  372 (449)
T cd07136         297 GKIVFGGNTDR-ETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDT--LDEAIEII-KSRPKPLALYLFSEDKKVEKK  372 (449)
T ss_pred             ceEEECCCcCC-CCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCC--HHHHHHHH-hCCCCCceEEEECCCHHHHHH
Confidence            47889997543 589999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe-cCCCCcCCCCCC
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET-FVPLTEWKYPYM  146 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~-~~~~~~~~~p~~  146 (147)
                      +++.+  ++|.|+||+...+...+.+||||    |.|+.+|.+++++||+.|++++. .+-+.+++||++
T Consensus       373 ~~~~l--~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~~~~~~~~~~~~~  440 (449)
T cd07136         373 VLENL--SFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKKSTWFDLPLRYPPY  440 (449)
T ss_pred             HHHhC--CcceEEECCccccccCCCCCccCcCcccCCcccCHHHHHHhccceEEEEcCCcCCccccCCCC
Confidence            99986  99999999876544346789999    77888999999999999999866 233477888654

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.

>PLN02766 coniferyl-aldehyde dehydrogenase

Probab=99.97  E-value=5.6e-30  Score=216.11  Aligned_cols=126  Identities=24%  Similarity=0.458  Sum_probs=114.3

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       365 a~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~--~deai~~a-N~~~~GL~a~Vft~d~~~a~~  441 (501)
T PLN02766        365 ATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKT--VEEAIKKA-NNTKYGLAAGIVTKDLDVANT  441 (501)
T ss_pred             CEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCC--HHHHHHHH-hCCCCCceEEEECCCHHHHHH
Confidence            589999976444689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++.+  ++|.|+||+...  ..+.+||||    |.|+.+|++++++|++.|+++..
T Consensus       442 ~~~~l--~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~  494 (501)
T PLN02766        442 VSRSI--RAGTIWVNCYFA--FDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTP  494 (501)
T ss_pred             HHHhC--CcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEe
Confidence            99986  999999998654  346789999    77888999999999999998754

>TIGR03374 ABALDH 1-pyrroline dehydrogenase

Probab=99.97  E-value=5.1e-30  Score=215.01  Aligned_cols=125  Identities=23%  Similarity=0.421  Sum_probs=113.4

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+.+++++|++++||+||||++|++|++  .||||+++ |+++|||+++|||+|.+++.+
T Consensus       343 a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~--~~eai~~a-n~~~~gL~a~vft~d~~~~~~  419 (472)
T TIGR03374       343 IKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDD--EEQVVNWA-NDSQYGLASSVWTKDVGRAHR  419 (472)
T ss_pred             eEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECC--HHHHHHHH-hCCCCCceEEEECCCHHHHHH
Confidence            589999976444589999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      +++.+  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|+++.
T Consensus       420 ~~~~l--~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~  471 (472)
T TIGR03374       420 LSARL--QYGCTWVNTHFML--VSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV  471 (472)
T ss_pred             HHHhC--CcceEEECCCCCC--CCCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence            99986  9999999987653  46799999    6788899999999999999863

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.

>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]

Probab=99.97  E-value=7.5e-30  Score=218.52  Aligned_cols=127  Identities=24%  Similarity=0.313  Sum_probs=113.1

Q ss_pred             eEEEECCccc----CCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYD----ESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||...    .+.|+|++||||.+++++|++++||+||||++|++|++  +||||+++ |+++|||++||||+|.+
T Consensus       453 Akvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~--~dEAI~la-N~s~yGLaasVfT~d~~  529 (604)
T PLN02419        453 AKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANS--FDEAISII-NKNKYGNGAAIFTSSGA  529 (604)
T ss_pred             CEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCC--HHHHHHHH-hCCCCCcEEEEECCCHH
Confidence            6899999642    13589999999999999999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCC--CCChHHHHhhcceeceEEEe
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND--KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g--~~~g~~~~~~f~~~k~v~~~  134 (147)
                      ++.++++.+  ++|.|+||+... ...+.+||||    |.|  +.+|.+++++|++.|+++..
T Consensus       530 ~a~~~a~~l--~aG~V~IN~~~~-~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~  589 (604)
T PLN02419        530 AARKFQMDI--EAGQIGINVPIP-VPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQK  589 (604)
T ss_pred             HHHHHHHhC--CeeeEEEcCCCC-CCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEEEc
Confidence            999999975  999999998743 3345789999    667  67899999999999999755

>KOG2455|consensus

Probab=99.97  E-value=8.4e-31  Score=212.70  Aligned_cols=146  Identities=66%  Similarity=1.140  Sum_probs=137.1

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      .+|++||+.++..|+|++|||+..-++.++|+.||+|||||+|..|+|++++|+++++.|.++|||+++||++|.+.+.+
T Consensus       410 leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~  489 (561)
T KOG2455|consen  410 LEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLH  489 (561)
T ss_pred             ceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHH
Confidence            46899999998899999999999999999999999999999999999999999999998889999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC-----cCCCCChHHHHhhcceeceEEEecCCCCcCCCCCCC
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKAGGPHYVLRWATPQSIKETFVPLTEWKYPYMG  147 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG-----~~g~~~g~~~~~~f~~~k~v~~~~~~~~~~~~p~~~  147 (147)
                      +.+.++..+|..+||+.++++...++||||     .+.+.||++.+.+|+.++++.+++.+..+++||.|.
T Consensus       490 a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp~~l~RwtSp~~ikEt~~~l~d~~yp~~~  560 (561)
T KOG2455|consen  490 ALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGPHYLLRWTSPLSIKETFVPLTDVKYPSMF  560 (561)
T ss_pred             HHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCceEEEeecCcchhhhcccCCcccCcCCCC
Confidence            999987789999999999998888999999     345789999999999999999999999999999983

>KOG2456|consensus

Probab=99.97  E-value=3.7e-31  Score=213.22  Aligned_cols=139  Identities=27%  Similarity=0.435  Sum_probs=126.7

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      .+|+.||..++.+ .|++||||.||++++++|+||+|||||||+.+++  +||+|+.+ |..+.+|++|+||+|.+.++|
T Consensus       302 ~kv~~Gg~~d~~d-~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~--l~Eai~~I-n~~eKPLa~Y~Fs~n~~~vkr  377 (477)
T KOG2456|consen  302 GKVAIGGESDESD-RYIAPTILLDVPEDSPVMQEEIFGPILPIITVQS--LDEAINFI-NEREKPLALYIFSNNEKLVKR  377 (477)
T ss_pred             CceecCCccchhh-cccCCeEEecCCCCChhhhhhhccCccceeEhhh--HHHHHHHH-hcCCCceEEEEecCCHHHHHH
Confidence            3788999987644 7999999999999999999999999999999998  79999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE-EecCCCC--cCCCCCC
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK-ETFVPLT--EWKYPYM  146 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~-~~~~~~~--~~~~p~~  146 (147)
                      ++.++  .+|.|.+|+..+|.....+||||    |+|+.+|+++.+.|+|.|++. +.++-+.  ..|||++
T Consensus       378 ~l~~t--sSGgvt~ND~i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~rs~~~d~~~~~RYPP~  447 (477)
T KOG2456|consen  378 FLTET--SSGGVTVNDVIMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLRSLGGDKLLALRYPPY  447 (477)
T ss_pred             HHHhc--cCCCeeecceEEEEEeeccCcCCcCccccccccccccccccccchhhhhcccccchhhhhcCCCC
Confidence            99986  89999999999888778999999    678899999999999999986 4456555  8999985

>PLN02278 succinic semialdehyde dehydrogenase

Probab=99.97  E-value=9.6e-30  Score=214.54  Aligned_cols=126  Identities=21%  Similarity=0.333  Sum_probs=114.0

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       366 a~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~--~deai~~~-N~~~~gL~a~vft~d~~~~~~  442 (498)
T PLN02278        366 AKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKT--EEEAIAIA-NDTEAGLAAYIFTRDLQRAWR  442 (498)
T ss_pred             CEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCC--HHHHHHHH-hCCCCCceEEEEcCCHHHHHH
Confidence            689999976444689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++.+  ++|.|+||+...+.  +.+||||    |.|+.+|++++++|++.|+++..
T Consensus       443 ~~~~l--~~G~v~iN~~~~~~--~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~  495 (498)
T PLN02278        443 VSEAL--EYGIVGVNEGLIST--EVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLG  495 (498)
T ss_pred             HHHhC--CcCeEEECCCCCCC--CCCCcCCcccCcCCccchHHHHHHhheeEEEEEe
Confidence            99986  99999999976543  5789999    67888999999999999998754

>PRK10090 aldehyde dehydrogenase A; Provisional

Probab=99.97  E-value=9.4e-30  Score=210.11  Aligned_cols=126  Identities=25%  Similarity=0.445  Sum_probs=114.6

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..+...|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+.+.+
T Consensus       278 a~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~vft~d~~~~~~  354 (409)
T PRK10090        278 ARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDT--LEEAIAMA-NDSDYGLTSSIYTQNLNVAMK  354 (409)
T ss_pred             CEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceEEEEEECC--HHHHHHHH-hCCCCCceEEEEcCCHHHHHH
Confidence            588999976554689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++.+  ++|.|+||+...+.  ...||||    |.|+.+|.+++++|++.|+++..
T Consensus       355 ~~~~l--~~G~v~iN~~~~~~--~~~pfGG~k~SG~G~~~g~~gl~~f~~~k~v~~~  407 (409)
T PRK10090        355 AIKGL--KFGETYINRENFEA--MQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ  407 (409)
T ss_pred             HHHhC--CcceEEECCCCCCC--CCCCcCCcccccCCccchHHHHHHhcceEEEEEe
Confidence            99986  99999999987654  3579999    77899999999999999998643

>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

Probab=99.97  E-value=1.2e-29  Score=211.18  Aligned_cols=139  Identities=26%  Similarity=0.436  Sum_probs=120.8

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      +++++||..+. .|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       297 a~~~~gg~~~~-~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~a-n~~~~gL~a~i~t~d~~~~~~  372 (443)
T cd07132         297 GKVAIGGQTDE-KERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNN--LDEAIEFI-NSREKPLALYVFSNNKKVINK  372 (443)
T ss_pred             CEEEeCCccCC-CCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCC--HHHHHHHH-hcCCCCcEEEEECCCHHHHHH
Confidence            36788987543 589999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEecC-CCC--cCCCCCC
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETFV-PLT--EWKYPYM  146 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~~-~~~--~~~~p~~  146 (147)
                      +++.+  ++|.|+||+...+...+.+||||    |.|+.+|.+++++|++.|+++.+.. .+.  +++|+++
T Consensus       373 ~~~~l--~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~~~~~~~~~~~~~~~  442 (443)
T cd07132         373 ILSNT--SSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKSLNMEKLNSLRYPPY  442 (443)
T ss_pred             HHHhC--CcceEEECCcccccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEccccccccccccCCCC
Confidence            99986  99999999877554446789999    7788999999999999999986531 132  7788664

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.

>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Probab=99.96  E-value=1.5e-29  Score=212.50  Aligned_cols=125  Identities=31%  Similarity=0.521  Sum_probs=113.8

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       352 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gLs~~vft~d~~~a~~  428 (481)
T cd07141         352 AKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKT--IDEVIERA-NNTTYGLAAAVFTKDIDKAIT  428 (481)
T ss_pred             CEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCC--HHHHHHHH-hCCCccceEEEECCCHHHHHH
Confidence            689999976544689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      +++.+  ++|.|+||+...  ..+.+||||    |.|+.+|.+++++|++.|+++.
T Consensus       429 ~~~~l--~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~  480 (481)
T cd07141         429 FSNAL--RAGTVWVNCYNV--VSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTI  480 (481)
T ss_pred             HHHhc--CcCeEEECCCCC--CCCCCCCCCcccCcCCccchHHHHHHHhheEEEEE
Confidence            99986  999999998653  346789999    7788899999999999999864

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.

>TIGR01780 SSADH succinate-semialdehyde dehydrogenase

Probab=99.96  E-value=1.1e-29  Score=211.52  Aligned_cols=121  Identities=24%  Similarity=0.398  Sum_probs=110.0

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..+...|+|++|||+.+++++|++++||+||||++|++|++  .||||+++ |+++|||++||||+|.+++.+
T Consensus       324 a~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~--~~eai~~a-n~~~~gL~~~vfs~d~~~~~~  400 (448)
T TIGR01780       324 AKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDD--EEEVIAIA-NDTEVGLAAYFFSRDLATIWR  400 (448)
T ss_pred             CEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECC--HHHHHHHH-hCCCcCceEEEECCCHHHHHH
Confidence            689999976544689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceec
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQ  129 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k  129 (147)
                      +++.+  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|
T Consensus       401 ~~~~l--~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k  448 (448)
T TIGR01780       401 VAEAL--EYGMVGINTGLIS--NVVAPFGGVKQSGLGREGSKYGIEEYLETK  448 (448)
T ss_pred             HHHhC--CccEEEECCCCCC--CCCCCCCCcccccCCccchHHHHHHHhccC
Confidence            99986  9999999997653  35789999    778899999999999865

SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).

>cd07099 ALDH_DDALDH Methylomonas sp

Probab=99.96  E-value=1.8e-29  Score=210.33  Aligned_cols=126  Identities=27%  Similarity=0.478  Sum_probs=114.9

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+.+++++|++++||+||||++|++|++  .||||+++ |+++|||+++|||+|.+++.+
T Consensus       323 a~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~i~t~d~~~~~~  399 (453)
T cd07099         323 AKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVAD--EDEAIALA-NDSRYGLSASVFSRDLARAEA  399 (453)
T ss_pred             CEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCC--HHHHHHHH-hCCCCCCeEEEEcCCHHHHHH
Confidence            578899876433689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++.+  ++|.|+||+...+...+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       400 ~~~~l--~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~  452 (453)
T cd07099         400 IARRL--EAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA  452 (453)
T ss_pred             HHHhC--CeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence            99986  89999999987655557899999    678889999999999999986

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.

>PLN02466 aldehyde dehydrogenase family 2 member

Probab=99.96  E-value=2.3e-29  Score=213.89  Aligned_cols=126  Identities=26%  Similarity=0.440  Sum_probs=113.9

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       402 a~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d--~deAi~~a-N~~~~GL~a~VfT~d~~~a~~  478 (538)
T PLN02466        402 ATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKD--LDEVIRRA-NNTRYGLAAGVFTQNLDTANT  478 (538)
T ss_pred             CEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCC--HHHHHHHH-hCCCCCceEEEEcCCHHHHHH
Confidence            588999976544689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++.+  ++|.|+||+...  ..+.+||||    |.|+++|.+++++|++.|+++..
T Consensus       479 ~~~~l--~aG~v~IN~~~~--~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~  531 (538)
T PLN02466        479 LSRAL--RVGTVWVNCFDV--FDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTP  531 (538)
T ss_pred             HHHhC--CeeeEEECCCCC--CCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEe
Confidence            99986  999999998644  345789999    77889999999999999998644

>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed

Probab=99.96  E-value=1.8e-29  Score=210.96  Aligned_cols=124  Identities=29%  Similarity=0.595  Sum_probs=113.5

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|  ++|||+++ |+++|||+++|||+|.+++.+
T Consensus       328 a~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~v~t~d~~~~~~  404 (457)
T PRK09406        328 ATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVAD--IDEAIEIA-NATTFGLGSNAWTRDEAEQER  404 (457)
T ss_pred             CEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCC--HHHHHHHH-hCCCCCceEEEEcCCHHHHHH
Confidence            688999976544689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++.+  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       405 ~~~~l--~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~  455 (457)
T PRK09406        405 FIDDL--EAGQVFINGMTVS--YPELPFGGVKRSGYGRELSAHGIREFCNIKTVW  455 (457)
T ss_pred             HHHhC--CcceEEECCCCCC--CCCCCCCCccccccCccchHHHHHHhhceEEEE
Confidence            99986  9999999997653  45799999    778889999999999999985

>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase

Probab=99.96  E-value=1.9e-29  Score=211.87  Aligned_cols=125  Identities=26%  Similarity=0.465  Sum_probs=113.2

Q ss_pred             eEEEECCcccC-----CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCH
Q psy1961           2 SEIIGGGQYDE-----SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDE   76 (147)
Q Consensus         2 a~v~~GG~~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~   76 (147)
                      |++++||....     .+|+|++|||+.+++++|++++||+||||++|++|+|  .||||+++ |+++|||+++|||+|.
T Consensus       346 a~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~--~~eai~~~-n~~~~gL~~~v~t~d~  422 (481)
T TIGR03216       346 ATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDS--EEEVIALA-NDTPYGLAASVWTEDL  422 (481)
T ss_pred             CEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCC--HHHHHHHH-hCCCccceEEEECCCH
Confidence            58899986431     3689999999999999999999999999999999998  69999999 9999999999999999


Q ss_pred             HHHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          77 SFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        77 ~~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      +++.++++.+  ++|.|+||+...+  .+.+||||    |.|+.+|.+++++|++.|+++.
T Consensus       423 ~~~~~~~~~l--~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~  479 (481)
T TIGR03216       423 SRAHRVARQM--EVGIVWVNSWFLR--DLRTPFGGSKLSGIGREGGVHSLEFYTELTNVCI  479 (481)
T ss_pred             HHHHHHHHhc--CccEEEECCCCCC--CCCCCcCCcccCcCCcCchHHHHHHhhceEEEEE
Confidence            9999999986  9999999987654  35789999    6788899999999999999864

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.

>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

Probab=99.96  E-value=2.5e-29  Score=210.90  Aligned_cols=126  Identities=29%  Similarity=0.545  Sum_probs=113.2

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+.+++++|++++||+||||++|++|+|  .||||+++ |+++|||+++|||+|.+++.+
T Consensus       347 a~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~--~deai~~~-n~~~~gL~a~v~t~d~~~~~~  423 (477)
T cd07113         347 DEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYED--EEELIQLI-NDTPFGLTASVWTNNLSKALR  423 (477)
T ss_pred             CEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCC--HHHHHHHH-hCCCCCceEEEECCCHHHHHH
Confidence            688999975434589999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++.+  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|+++..
T Consensus       424 ~~~~l--~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~  476 (477)
T cd07113         424 YIPRI--EAGTVWVNMHTFL--DPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR  476 (477)
T ss_pred             HHHhC--CcceEEECCCCCC--CCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence            99986  9999999986542  35789999    77888999999999999998743

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.

>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=99.96  E-value=2.6e-29  Score=210.66  Aligned_cols=126  Identities=21%  Similarity=0.419  Sum_probs=114.5

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+.++++++++++||+||||++|++|+|  .||||+++ |+++|||+++|||+|.+++.+
T Consensus       344 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~--~deai~~~-N~~~~gL~a~v~t~d~~~~~~  420 (475)
T PRK13473        344 IRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDD--EDQAVRWA-NDSDYGLASSVWTRDVGRAHR  420 (475)
T ss_pred             eEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCC--HHHHHHHH-hCCCCCceEEEECCCHHHHHH
Confidence            689999976544689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++.+  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|+++..
T Consensus       421 ~~~~l--~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~  473 (475)
T PRK13473        421 VSARL--QYGCTWVNTHFML--VSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVK  473 (475)
T ss_pred             HHHhC--CcceEEECCCCCC--CCCCCCCCccccccCccchHHHHHHHhceEEEEEe
Confidence            99986  9999999997653  35789999    77889999999999999998754

>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional

Probab=99.96  E-value=2.9e-29  Score=209.95  Aligned_cols=125  Identities=22%  Similarity=0.433  Sum_probs=113.2

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++||||.+++++|++++||+||||++|++|+|  .||||+++ |+++|||+++|||+|.+++.+
T Consensus       331 a~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d--~~eai~~~-n~~~~gLs~~v~t~d~~~a~~  407 (462)
T PRK13968        331 ARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKD--AEHALELA-NDSEFGLSATIFTTDETQARQ  407 (462)
T ss_pred             CEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECC--HHHHHHHH-hCCCCcceEEEEcCCHHHHHH
Confidence            688999975443589999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      +++.+  ++|.|+||+...  ..+.+||||    |.|+++|.+++++|++.|++..
T Consensus       408 ~~~~l--~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~  459 (462)
T PRK13968        408 MAARL--ECGGVFINGYCA--SDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWK  459 (462)
T ss_pred             HHHhC--CcceEEECCCCC--CCCCCCCCCccccccCcCchHHHHHHhcceeEEEE
Confidence            99976  999999998754  346789999    6788999999999999999864

>PLN02315 aldehyde dehydrogenase family 7 member

Probab=99.96  E-value=4.3e-29  Score=211.01  Aligned_cols=128  Identities=27%  Similarity=0.466  Sum_probs=112.7

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||...+..|+|++|||+ +++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       363 a~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~--~deai~~a-N~~~~gL~a~Vft~d~~~a~~  438 (508)
T PLN02315        363 GKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKT--LEEAIEIN-NSVPQGLSSSIFTRNPETIFK  438 (508)
T ss_pred             CEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCC--HHHHHHHH-hCCCCCCeEEEEcCCHHHHHH
Confidence            6799999754446899999999 5999999999999999999999998  79999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++..++++|.|+||+..... .+.+||||    |.|+.+|.+++++|++.|+++..
T Consensus       439 ~~~~~~l~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~  494 (508)
T PLN02315        439 WIGPLGSDCGIVNVNIPTNGA-EIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN  494 (508)
T ss_pred             HhhhcccceeEEEEcCCCCCC-CCCCCCCccccccCCccchHHHHHHHhhEEEEEEe
Confidence            986434599999999865433 35789999    77888999999999999998755

>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

Probab=99.96  E-value=4e-29  Score=211.36  Aligned_cols=128  Identities=42%  Similarity=0.793  Sum_probs=114.8

Q ss_pred             eEEEECCcccCC--CCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHH
Q psy1961           2 SEIIGGGQYDES--CGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQ   79 (147)
Q Consensus         2 a~v~~GG~~~~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~   79 (147)
                      +++++||..+..  .|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+.+
T Consensus       377 ~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~v~t~d~~~~  453 (512)
T cd07124         377 GRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKD--FDEALEIA-NDTEYGLTGGVFSRSPEHL  453 (512)
T ss_pred             CEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCC--HHHHHHHH-hCCCCCCeEEEEcCCHHHH
Confidence            578999976432  689999999999999999999999999999999998  69999999 9999999999999999999


Q ss_pred             HHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceeceEEEe
Q psy1961          80 KRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        80 ~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~v~~~  134 (147)
                      .++++.+  ++|.|+||+...+...+.+||||    |.| +.+|.+++++|++.|+++.+
T Consensus       454 ~~~~~~l--~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k~v~~~  511 (512)
T cd07124         454 ERARREF--EVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTVTEN  511 (512)
T ss_pred             HHHHHhC--CcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccEEEEEEe
Confidence            9999986  99999999987655445789999    667 67789999999999999755

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.

>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

Probab=99.96  E-value=4.7e-29  Score=208.19  Aligned_cols=125  Identities=27%  Similarity=0.504  Sum_probs=113.3

Q ss_pred             eEEEECCcccC----CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYDE----SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||....    ..|+|++|||+.+++++|++++||+||||++|++|++  .||||+++ |+++|||+++|||+|.+
T Consensus       322 a~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~--~~eai~~~-n~~~~gL~a~vft~d~~  398 (456)
T cd07107         322 ARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRD--EAEMVAQA-NGVEYGLTAAIWTNDIS  398 (456)
T ss_pred             CEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCC--HHHHHHHH-hCCCCcceEEEECCCHH
Confidence            68999996532    3589999999999999999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      ++.++++.+  ++|.|+||+...+  .+.+||||    |.|+.+|++++++|++.|+++.
T Consensus       399 ~~~~~~~~l--~~G~v~iN~~~~~--~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~  454 (456)
T cd07107         399 QAHRTARRV--EAGYVWINGSSRH--FLGAPFGGVKNSGIGREECLEELLSYTQEKNVNV  454 (456)
T ss_pred             HHHHHHHhc--CcCEEEECCCCCC--CCCCCcCCcccccCCcCchHHHHHHhhceEEEEE
Confidence            999999986  9999999998754  35789999    7788899999999999999874

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.

>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like

Probab=99.96  E-value=4.4e-29  Score=207.44  Aligned_cols=126  Identities=28%  Similarity=0.430  Sum_probs=113.4

Q ss_pred             eEEEECCcccC--CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHH
Q psy1961           2 SEIIGGGQYDE--SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQ   79 (147)
Q Consensus         2 a~v~~GG~~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~   79 (147)
                      |++++||....  ..|+|++|||+.+++++|++++||+||||++|++|++  .||||+++ |+++|||+++|||+|.+++
T Consensus       302 a~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~v~t~d~~~a  378 (434)
T cd07133         302 ARVIELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDS--LDEAIDYI-NARPRPLALYYFGEDKAEQ  378 (434)
T ss_pred             CEEEecCCCCcCCCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCC--HHHHHHHH-hCCCCCceEEEECCCHHHH
Confidence            57888886532  3589999999999999999999999999999999998  69999999 9999999999999999999


Q ss_pred             HHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          80 KRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        80 ~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      .++++.+  ++|.|+||+...+...+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       379 ~~~~~~l--~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~  433 (434)
T cd07133         379 DRVLRRT--HSGGVTINDTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF  433 (434)
T ss_pred             HHHHHhC--CcceEEECCcccccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence            9999976  99999999876544456799999    778889999999999999885

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.

>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

Probab=99.96  E-value=5.2e-29  Score=209.01  Aligned_cols=125  Identities=25%  Similarity=0.482  Sum_probs=112.7

Q ss_pred             eEEEECCcccC----CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYDE----SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||....    ..|+|++|||+.+++++|++++||+||||++|++|+|  .||||+++ |+++|||+++|||+|.+
T Consensus       341 a~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~v~t~d~~  417 (475)
T cd07117         341 AKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKT--EDEVIDMA-NDSEYGLGGGVFTKDIN  417 (475)
T ss_pred             CEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECC--HHHHHHHH-hCCCcCceEEEECCCHH
Confidence            58899987532    3589999999999999999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      ++.++++.+  ++|.|+||+...  ..+.+||||    |.|+.+|.+++++|++.|+++.
T Consensus       418 ~~~~~~~~l--~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~  473 (475)
T cd07117         418 RALRVARAV--ETGRVWVNTYNQ--IPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYI  473 (475)
T ss_pred             HHHHHHHhC--CcceEEECCCCC--CCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEE
Confidence            999999976  999999998654  346789999    7788999999999999999864

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.

>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

Probab=99.96  E-value=4.6e-29  Score=207.66  Aligned_cols=124  Identities=30%  Similarity=0.514  Sum_probs=113.3

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..+...|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       318 a~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~i~t~d~~~~~~  394 (446)
T cd07106         318 AKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSD--EDEVIARA-NDSEYGLGASVWSSDLERAEA  394 (446)
T ss_pred             CEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCC--HHHHHHHH-hCCCCCceEEEECCCHHHHHH
Confidence            588999976544689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++++  ++|.|+||+...  ..+.+||||    |.|+.+|++++++|++.|+++
T Consensus       395 ~~~~~--~~G~v~iN~~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~  445 (446)
T cd07106         395 VARRL--EAGTVWINTHGA--LDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN  445 (446)
T ss_pred             HHHhC--CccEEEECCCCC--CCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence            99986  999999999864  346799999    778899999999999999885

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.

>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

Probab=99.96  E-value=4.7e-29  Score=209.22  Aligned_cols=124  Identities=28%  Similarity=0.474  Sum_probs=112.8

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       348 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~a~vft~d~~~a~~  424 (476)
T cd07142         348 ATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKT--VDEVIKRA-NNSKYGLAAGVFSKNIDTANT  424 (476)
T ss_pred             CEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCC--HHHHHHHH-hCCCCCceEEEECCCHHHHHH
Confidence            589999976545689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++.+  ++|.|+||+...  ..+.+||||    |.|+.+|.+++++||+.|+++
T Consensus       425 ~~~~l--~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~  475 (476)
T cd07142         425 LSRAL--KAGTVWVNCYDV--FDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV  475 (476)
T ss_pred             HHHhC--CcceEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHhhheeEEe
Confidence            99986  999999998653  346799999    778889999999999999874

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.

>PRK13252 betaine aldehyde dehydrogenase; Provisional

Probab=99.96  E-value=6e-29  Score=209.17  Aligned_cols=127  Identities=27%  Similarity=0.479  Sum_probs=113.7

Q ss_pred             eEEEECCcccC----CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYDE----SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||....    ..|+|++|||+.+++++|++++||+||||++|++|+|  .||||+++ |+++|||+++|||+|.+
T Consensus       347 a~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~a~I~t~d~~  423 (488)
T PRK13252        347 ARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDD--EDEVIARA-NDTEYGLAAGVFTADLS  423 (488)
T ss_pred             CEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCC--HHHHHHHH-hCCCCCCeEEEEeCCHH
Confidence            58899996422    3589999999999999999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEec
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETF  135 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~  135 (147)
                      ++.++++++  ++|.|+||+...  ..+.+||||    |.|+.+|.+++++||+.|+++...
T Consensus       424 ~~~~~~~~l--~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~~  481 (488)
T PRK13252        424 RAHRVIHQL--EAGICWINTWGE--SPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVEM  481 (488)
T ss_pred             HHHHHHHhc--CccEEEECCCCC--CCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEeC
Confidence            999999986  999999998543  345789999    778899999999999999998653

>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

Probab=99.96  E-value=7.1e-29  Score=209.32  Aligned_cols=130  Identities=42%  Similarity=0.815  Sum_probs=115.2

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      +++++||..+...|+|++|||+.+++++|++++||+||||++|++|+++++||||+++ |+++|||+++|||+|.+++.+
T Consensus       365 g~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d~~~~eai~~~-n~~~~gL~~~v~t~d~~~~~~  443 (500)
T cd07083         365 GQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVA-NSTPYGLTGGVYSRKREHLEE  443 (500)
T ss_pred             CEEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeCCCCHHHHHHHH-hCCCCCceEEEEeCCHHHHHH
Confidence            4788999765446899999999999999999999999999999999944489999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++.+  ++|.|+||+...+...+.+||||    |.| +.+|.+++++|++.|+++..
T Consensus       444 ~~~~l--~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~~~~~  499 (500)
T cd07083         444 ARREF--HVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLEMKAVAER  499 (500)
T ss_pred             HHHhC--CeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHHhhheeEEEEc
Confidence            99976  99999999987665445789999    666 57889999999999998754

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.

>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

Probab=99.96  E-value=6.4e-29  Score=207.24  Aligned_cols=126  Identities=25%  Similarity=0.491  Sum_probs=112.5

Q ss_pred             eEEEECCcccC-CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHH
Q psy1961           2 SEIIGGGQYDE-SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQK   80 (147)
Q Consensus         2 a~v~~GG~~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~   80 (147)
                      |++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.
T Consensus       322 a~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~i~t~d~~~a~  398 (454)
T cd07101         322 ATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVAD--DDEAIELA-NDTDYGLNASVWTRDGARGR  398 (454)
T ss_pred             CEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCC--HHHHHHHH-hCCCCCceEEEEcCCHHHHH
Confidence            57899986432 2579999999999999999999999999999999998  69999999 99999999999999999999


Q ss_pred             HHHhhccCceeEEEEcCCCCCC-CCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          81 RCLDDLKYAAGNYYINDKSTGS-VVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        81 ~~~~~~~~~~G~v~iN~~~~~~-~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      ++++.+  ++|.|+||+...+. ..+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       399 ~~~~~l--~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~  453 (454)
T cd07101         399 RIAARL--RAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVA  453 (454)
T ss_pred             HHHHhc--CcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEe
Confidence            999986  99999999976532 345789999    778899999999999999885

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).

>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

Probab=99.96  E-value=8.2e-29  Score=208.03  Aligned_cols=126  Identities=26%  Similarity=0.510  Sum_probs=113.3

Q ss_pred             eEEEECCcccC----CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYDE----SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||....    ..|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+
T Consensus       346 a~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~v~t~d~~  422 (480)
T cd07559         346 AEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKD--EEEAIAIA-NDTEYGLGGGVWTRDIN  422 (480)
T ss_pred             CEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCC--HHHHHHHH-hCCCCCCeEEEECCCHH
Confidence            68999997642    3589999999999999999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      ++.++++++  ++|.|+||+...  ..+.+||||    |.|+++|.+++++|++.|+++..
T Consensus       423 ~a~~~a~~l--~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~  479 (480)
T cd07559         423 RALRVARGI--QTGRVWVNCYHQ--YPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNILVS  479 (480)
T ss_pred             HHHHHHHhc--CcceEEECCCCC--CCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEe
Confidence            999999986  999999997654  335799999    77888999999999999998643

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.

>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional

Probab=99.96  E-value=8.6e-29  Score=209.43  Aligned_cols=128  Identities=43%  Similarity=0.802  Sum_probs=114.8

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      +++++||..+...|+|++|||+.+++++|++++||+||||++|++|++  ++|||+++ |+++|||+++|||+|.+++.+
T Consensus       381 ~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~-N~~~~gL~a~v~t~d~~~a~~  457 (514)
T PRK03137        381 GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKD--FDHALEIA-NNTEYGLTGAVISNNREHLEK  457 (514)
T ss_pred             CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCC--HHHHHHHH-hCCCCCceEEEEcCCHHHHHH
Confidence            578999976544689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++.+  ++|.|+||+...+...+.+||||    |.| +.+|.+++++|++.|+++..
T Consensus       458 ~~~~l--~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k~v~~~  513 (514)
T PRK03137        458 ARREF--HVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKTVSEM  513 (514)
T ss_pred             HHHhC--CcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceEEEEEEe
Confidence            99976  99999999876655445689999    667 57899999999999998754

>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

Probab=99.96  E-value=6e-29  Score=206.55  Aligned_cols=125  Identities=27%  Similarity=0.520  Sum_probs=112.6

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      +++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       303 a~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~--~deai~~~-N~~~~gL~a~v~t~d~~~a~~  378 (432)
T cd07137         303 DKIVHGGERD-EKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKK--IEESIEII-NSRPKPLAAYVFTKNKELKRR  378 (432)
T ss_pred             CeEEeCCCcC-CCCCEEeeEEEecCCCcchhhhcccccCceEEEEeCC--HHHHHHHH-hcCCCCcEEEEECCCHHHHHH
Confidence            5788998653 3689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++++  ++|.|+||+...+...+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       379 ~~~~l--~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~  431 (432)
T cd07137         379 IVAET--SSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVL  431 (432)
T ss_pred             HHHhC--CcCcEEECCccccccCCCCCCCCcCcCcCCccccHHHHHHhccCceee
Confidence            99976  99999999876544446789999    778889999999999999874

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.

>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

Probab=99.96  E-value=9.5e-29  Score=207.44  Aligned_cols=127  Identities=27%  Similarity=0.419  Sum_probs=111.9

Q ss_pred             eEEEECCcccC----CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYDE----SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||....    .+|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+
T Consensus       341 a~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~--~deai~~~-N~~~~gL~a~v~t~d~~  417 (478)
T cd07085         341 AKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDT--LDEAIAII-NANPYGNGAAIFTRSGA  417 (478)
T ss_pred             CEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCC--HHHHHHHH-hCCCCCceEEEECCCHH
Confidence            58999986421    3589999999999999999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCC--CCChHHHHhhcceeceEEEe
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND--KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g--~~~g~~~~~~f~~~k~v~~~  134 (147)
                      ++.++++++  ++|.|+||+... ...+.+||||    |.|  +++|.+++++|++.|+++..
T Consensus       418 ~~~~~~~~l--~~G~v~iN~~~~-~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~  477 (478)
T cd07085         418 AARKFQREV--DAGMVGINVPIP-VPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR  477 (478)
T ss_pred             HHHHHHHhC--CcceEEEcCCCC-CCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEe
Confidence            999999986  999999998754 3345789999    566  46799999999999998743

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.

>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

Probab=99.96  E-value=7.6e-29  Score=206.62  Aligned_cols=122  Identities=28%  Similarity=0.518  Sum_probs=111.1

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..   .|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||++||||+|.+++.+
T Consensus       327 a~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~i~t~d~~~a~~  400 (453)
T cd07094         327 ARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDD--FEEAIRIA-NSTDYGLQAGIFTRDLNVAFK  400 (453)
T ss_pred             CEEEeCccC---CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCC--HHHHHHHH-hCCCCCCeeEEECCCHHHHHH
Confidence            578888854   478999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++.+  ++|.|+||+.... ..+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       401 ~~~~l--~~g~v~iN~~~~~-~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~  452 (453)
T cd07094         401 AAEKL--EVGGVMVNDSSAF-RTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV  452 (453)
T ss_pred             HHHhc--CcCeEEEcCCCCC-CCCCCCCCCccccccCcCChHHHHHHHhceeEEe
Confidence            99986  9999999998643 246799999    778899999999999999985

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.

>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

Probab=99.96  E-value=1e-28  Score=207.32  Aligned_cols=129  Identities=22%  Similarity=0.397  Sum_probs=114.7

Q ss_pred             eEEEECCcccCC--CCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHH
Q psy1961           2 SEIIGGGQYDES--CGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQ   79 (147)
Q Consensus         2 a~v~~GG~~~~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~   79 (147)
                      |++++||.....  .|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++
T Consensus       342 a~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~--~deai~~~-n~~~~gL~a~v~t~d~~~a  418 (478)
T cd07086         342 GTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDS--LEEAIAIN-NDVPQGLSSSIFTEDLREA  418 (478)
T ss_pred             CEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCC--HHHHHHHH-hCCCCcceEEEEcCCHHHH
Confidence            578999975432  589999999999999999999999999999999998  69999999 9999999999999999999


Q ss_pred             HHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          80 KRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        80 ~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      .++++.+.+++|.|+||+...+. .+.+||||    |.|+.+|.+++++|++.|+++.+
T Consensus       419 ~~~~~~~~~~~G~v~iN~~~~~~-~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~~  476 (478)
T cd07086         419 FRWLGPKGSDCGIVNVNIPTSGA-EIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN  476 (478)
T ss_pred             HHHHhcCcccceeEEECCCCCCC-CCCCCCCCcccccCCccchHHHHHHhhceEEEEEe
Confidence            99999832499999999986653 46789999    67888899999999999998754

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).

>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

Probab=99.96  E-value=1.1e-28  Score=208.71  Aligned_cols=127  Identities=42%  Similarity=0.787  Sum_probs=113.2

Q ss_pred             EEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHH
Q psy1961           3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRC   82 (147)
Q Consensus         3 ~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~   82 (147)
                      ++++||..+...|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.++
T Consensus       379 ~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~--~deai~~~-n~~~~gL~a~i~t~d~~~~~~~  455 (511)
T TIGR01237       379 ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAAD--FDEALEIA-NGTEYGLTGGVYSNTRDHIERA  455 (511)
T ss_pred             cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCC--HHHHHHHH-hCCCCCCeEEEEcCCHHHHHHH
Confidence            67888865444689999999999999999999999999999999998  69999999 9999999999999999999999


Q ss_pred             HhhccCceeEEEEcCCCCCCCCCCccccC----cCCC-CChHHHHhhcceeceEEEe
Q psy1961          83 LDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDK-AGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        83 ~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~-~~g~~~~~~f~~~k~v~~~  134 (147)
                      ++++  ++|.|+||+...+...+.+||||    |.|+ .+|++++++|++.|+++.+
T Consensus       456 ~~~l--~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v~~~  510 (511)
T TIGR01237       456 AAEF--EVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTVTEN  510 (511)
T ss_pred             HHhC--CcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceEEEEEe
Confidence            9976  99999999987655445689999    6674 6899999999999998754

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.

>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

Probab=99.96  E-value=1.2e-28  Score=206.82  Aligned_cols=128  Identities=21%  Similarity=0.375  Sum_probs=112.6

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+.++++ |++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       341 a~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~--~~eai~~a-N~~~~gL~a~v~t~d~~~a~~  416 (474)
T cd07130         341 GTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDT--LEEAIAWN-NEVPQGLSSSIFTTDLRNAFR  416 (474)
T ss_pred             CEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCC--HHHHHHHH-hCCCCCceEEEEcCCHHHHHH
Confidence            688999975444689999999998766 99999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++.+++++|.|+||+..... .+.+||||    |.|+.+|.+++++|++.|+++..
T Consensus       417 ~~~~~~~~~g~v~iN~~~~~~-~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~  472 (474)
T cd07130         417 WLGPKGSDCGIVNVNIGTSGA-EIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN  472 (474)
T ss_pred             HHhhcCcceEEEEEcCCCCCC-CCCCCcCccccccCCccchHHHHHHHhheEEEEEe
Confidence            998744699999999865432 45789999    77889999999999999988643

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.

>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase

Probab=99.96  E-value=1.1e-28  Score=207.02  Aligned_cols=124  Identities=23%  Similarity=0.429  Sum_probs=110.5

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..   .|+|++|||+++++++|++++||+||||++|++|+|  .|||++++ |+++|||+++|||+|.+++.+
T Consensus       343 a~vl~gg~~---~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~--~~eai~~a-N~~~~gL~a~v~t~d~~~~~~  416 (472)
T TIGR03250       343 ARLLLGNVR---DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCD--IDDAIRIS-NSTAYGLSSGVCTNRLDYITR  416 (472)
T ss_pred             CEEEECCCc---CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCC--HHHHHHHH-hCCCccceEEEEcCCHHHHHH
Confidence            588898864   489999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++++  ++|.|+||+..... .+.+||||    |.| +.++.+++++|++.|+++++
T Consensus       417 ~~~~l--~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~~  471 (472)
T TIGR03250       417 FIAEL--QVGTVNVWEVPGYR-LELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSLP  471 (472)
T ss_pred             HHHHC--CcceEEEcCCCCCC-CCCCCCCccccccCCCCCChHHHHHHhhceEEEEEe
Confidence            99986  99999999876433 34689999    667 45778999999999998744

It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.

>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like

Probab=99.96  E-value=1e-28  Score=205.23  Aligned_cols=125  Identities=30%  Similarity=0.506  Sum_probs=113.4

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|  .||||+++ |+++|||+++|||+|.+.+.+
T Consensus       304 a~~~~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gl~a~v~t~d~~~~~~  379 (433)
T cd07134         304 AKVEFGGQFDA-AQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYED--LDEVIEYI-NAKPKPLALYVFSKDKANVNK  379 (433)
T ss_pred             CEEEeCCCcCC-CCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCC--HHHHHHHH-hCCCCCcEEEEECCCHHHHHH
Confidence            68899997643 579999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++.+  ++|.|+||+...+...+.+||||    |.|+.+|.+++++|++.|++.
T Consensus       380 ~~~~l--~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~  432 (433)
T cd07134         380 VLART--SSGGVVVNDVVLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL  432 (433)
T ss_pred             HHHhC--CcceEEECCcccccCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence            99976  99999999976544446789999    678899999999999999885

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.

>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

Probab=99.96  E-value=1.4e-28  Score=206.95  Aligned_cols=126  Identities=28%  Similarity=0.489  Sum_probs=113.5

Q ss_pred             eEEEECCcccC-------CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcC
Q psy1961           2 SEIIGGGQYDE-------SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE   74 (147)
Q Consensus         2 a~v~~GG~~~~-------~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~   74 (147)
                      |++++||....       ..|+|++|||+.+++++|++++||+||||++|++|+|  .||||+++ |+++|||+++|||+
T Consensus       341 a~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~--~~eai~~~-N~~~~gL~a~v~t~  417 (488)
T TIGR02299       341 ATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKD--EEEAIEKA-NDTRYGLAGYVWTN  417 (488)
T ss_pred             CEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCC--HHHHHHHH-hCCCCCceEEEEcC
Confidence            58899986532       2489999999999999999999999999999999998  69999999 99999999999999


Q ss_pred             CHHHHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          75 DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        75 d~~~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      |.+.+.++++.+  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|+++.+
T Consensus       418 d~~~a~~~~~~l--~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~  477 (488)
T TIGR02299       418 DVGRAHRVALAL--EAGMIWVNSQNVR--HLPTPFGGVKASGIGREGGTYSFDFYTETKNVALA  477 (488)
T ss_pred             CHHHHHHHHHhC--CcCeEEECCCCCC--CCCCCCCCCccCcCCccchHHHHHHHhceEEEEEe
Confidence            999999999986  9999999987653  35789999    67888999999999999999765

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.

>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

Probab=99.96  E-value=1.7e-28  Score=206.21  Aligned_cols=125  Identities=28%  Similarity=0.485  Sum_probs=113.6

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..+...|+|++|||+.+++++|++++||+||||++|++|++  .||||+++ |+++|||+++|||+|.+++.+
T Consensus       351 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~v~t~d~~~~~~  427 (481)
T cd07143         351 ATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKT--EEEAIKRA-NDSTYGLAAAVFTNNINNAIR  427 (481)
T ss_pred             CEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCC--HHHHHHHH-hCCCCCceEEEECCCHHHHHH
Confidence            588999976544689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      +++.+  ++|.|+||+...  ..+.+||||    |.|+.+|.+++++|++.|+++.
T Consensus       428 ~~~~l--~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~  479 (481)
T cd07143         428 VANAL--KAGTVWVNCYNL--LHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHI  479 (481)
T ss_pred             HHHhc--CcCeEEECCCCC--CCCCCCCCCccccccCcccHHHHHHHHhCeEEEEE
Confidence            99976  999999998754  346789999    7788999999999999999864

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.

>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

Probab=99.96  E-value=1.6e-28  Score=206.19  Aligned_cols=124  Identities=25%  Similarity=0.428  Sum_probs=110.6

Q ss_pred             eEEEECCcccC----CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYDE----SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||....    ..|+|++|||+.+++ +|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+
T Consensus       346 a~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~--~~eai~~a-N~~~~gLsa~v~t~d~~  421 (479)
T cd07116         346 AEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKD--EEEALEIA-NDTLYGLGAGVWTRDGN  421 (479)
T ss_pred             CEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCC--HHHHHHHH-hCCcccceEEEEcCCHH
Confidence            58899986532    258999999999875 999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      ++.++++++  ++|.|+||+...  ..+.+||||    |.|+++|.+++++|++.|++++
T Consensus       422 ~a~~~~~~l--~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~~  477 (479)
T cd07116         422 TAYRMGRGI--QAGRVWTNCYHL--YPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLV  477 (479)
T ss_pred             HHHHHHHhc--CcCeEEECCCCC--CCCCCCcCCCccCcCCccChHHHHHHhhceEEEEE
Confidence            999999986  999999998654  245789999    7788999999999999999865

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.

>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

Probab=99.96  E-value=1.4e-28  Score=206.30  Aligned_cols=124  Identities=31%  Similarity=0.517  Sum_probs=113.2

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..+...|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       348 a~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gLsa~v~t~d~~~~~~  424 (476)
T cd07091         348 ATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKT--EDEVIERA-NDTEYGLAAGVFTKDINKALR  424 (476)
T ss_pred             CEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCC--HHHHHHHH-hCCCCCceEEEECCCHHHHHH
Confidence            589999976555689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++.+  ++|.|+||+...  ..+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       425 ~~~~l--~~g~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~  475 (476)
T cd07091         425 VSRAL--KAGTVWVNTYNV--FDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT  475 (476)
T ss_pred             HHHhc--CcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHhhceeEEe
Confidence            99986  999999998654  346799999    778889999999999999875

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co

>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

Probab=99.96  E-value=1.8e-28  Score=205.57  Aligned_cols=125  Identities=23%  Similarity=0.422  Sum_probs=112.0

Q ss_pred             eEEEECCcccC--CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHH
Q psy1961           2 SEIIGGGQYDE--SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQ   79 (147)
Q Consensus         2 a~v~~GG~~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~   79 (147)
                      |++++||....  ..|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++
T Consensus       341 a~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~v~t~d~~~a  417 (473)
T cd07097         341 AKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRD--YDEALAIA-NDTEFGLSAGIVTTSLKHA  417 (473)
T ss_pred             CEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCC--HHHHHHHH-hCCCCCceEEEECCCHHHH
Confidence            57899997532  3579999999999999999999999999999999998  69999999 9999999999999999999


Q ss_pred             HHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceeceEE
Q psy1961          80 KRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        80 ~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~v~  132 (147)
                      .++++.+  ++|.|+||+...+. .+.+||||    |.| +.+|.+++++|++.|+++
T Consensus       418 ~~~~~~l--~~g~v~iN~~~~~~-~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~  472 (473)
T cd07097         418 THFKRRV--EAGVVMVNLPTAGV-DYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVY  472 (473)
T ss_pred             HHHHHhC--CcCeEEECCCCCCC-CCCCCCCCcccccCcccCCcHHHHHHhhceeEEe
Confidence            9999976  99999999876543 35789999    667 789999999999999985

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.

>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

Probab=99.96  E-value=2e-28  Score=204.91  Aligned_cols=123  Identities=29%  Similarity=0.454  Sum_probs=112.0

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..   .|+|++|||+.+++++|++++||+||||++|++|+|  .||||+++ |+++|||+++|||+|.+++.+
T Consensus       337 a~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~a~v~t~d~~~a~~  410 (465)
T cd07151         337 ATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADD--EEEALELA-NDTEYGLSGAVFTSDLERGVQ  410 (465)
T ss_pred             CEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCC--HHHHHHHH-hCCCccceEEEECCCHHHHHH
Confidence            578888853   579999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      +++.+  ++|.|+||+.+.+. .+.+||||    |.|+.+|++++++|++.|++++
T Consensus       411 ~~~~l--~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~  463 (465)
T cd07151         411 FARRI--DAGMTHINDQPVND-EPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISV  463 (465)
T ss_pred             HHHhC--CcCeEEECCCCCCC-CCCCCCCCcccccCCcCChHHHHHHhhceEEEEe
Confidence            99986  99999999987643 35789999    7788999999999999999864

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.

>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

Probab=99.96  E-value=2e-28  Score=203.11  Aligned_cols=124  Identities=25%  Similarity=0.466  Sum_probs=112.4

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+.+++++|++++||+||||++|++|+|  .||||+++ |+++|||+++|||+|.+.+.+
T Consensus       301 a~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~a~v~t~d~~~~~~  377 (429)
T cd07100         301 ATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKD--EEEAIALA-NDSPFGLGGSVFTTDLERAER  377 (429)
T ss_pred             CEEEeCCCcCCCCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCC--HHHHHHHH-hCCCcCceEEEECCCHHHHHH
Confidence            578899975444589999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++.+  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       378 ~~~~l--~~g~v~iN~~~~~--~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~  428 (429)
T cd07100         378 VARRL--EAGMVFINGMVKS--DPRLPFGGVKRSGYGRELGRFGIREFVNIKTVW  428 (429)
T ss_pred             HHHhC--CcCeEEECCCCCC--CCCCCcCCccccccCCcchHHHHHHhcceeEEe
Confidence            99986  9999999987643  46789999    778899999999999999874

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.

>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

Probab=99.96  E-value=2.3e-28  Score=205.34  Aligned_cols=125  Identities=30%  Similarity=0.496  Sum_probs=113.0

Q ss_pred             eEEEECCcccC---CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHH
Q psy1961           2 SEIIGGGQYDE---SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESF   78 (147)
Q Consensus         2 a~v~~GG~~~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~   78 (147)
                      |++++||....   ..|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.++
T Consensus       351 a~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gLsa~i~t~d~~~  427 (484)
T cd07144         351 AKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKT--YEEAIKKA-NDTTYGLAAAVFTKDIRR  427 (484)
T ss_pred             CEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCC--HHHHHHHH-hCCCCCceEEEECCCHHH
Confidence            57889987543   2589999999999999999999999999999999998  69999999 999999999999999999


Q ss_pred             HHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          79 QKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        79 ~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      +.++++.+  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|+++.
T Consensus       428 a~~~~~~l--~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~  482 (484)
T cd07144         428 AHRVAREL--EAGMVWINSSNDS--DVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHI  482 (484)
T ss_pred             HHHHHHhc--CcCEEEECCCCCC--CCCCCcCCcccCcCCCCchHHHHHHhhceEEEEE
Confidence            99999986  9999999987543  35789999    7788899999999999999864

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.

>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=99.96  E-value=2.4e-28  Score=206.00  Aligned_cols=124  Identities=21%  Similarity=0.285  Sum_probs=111.5

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..   .|+|++|||+.+++++|++++||+||||++|++|+|  .||||+++ |+++|||+++|||+|.+++.+
T Consensus       360 a~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~--~deai~~a-n~~~~gL~a~v~t~d~~~a~~  433 (496)
T PLN00412        360 ATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINS--VEEGIHHC-NASNFGLQGCVFTRDINKAIL  433 (496)
T ss_pred             CEEEecCCC---CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCC--HHHHHHHH-hCCCCCceEEEEcCCHHHHHH
Confidence            577777642   589999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++.+  ++|.|+||+.... ..+.+||||    |.|+.+|.+++++|++.|+++..
T Consensus       434 ~~~~l--~~G~v~vN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~  487 (496)
T PLN00412        434 ISDAM--ETGTVQINSAPAR-GPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVIN  487 (496)
T ss_pred             HHHhC--CcceEEEcCCCCC-CCCCCCCCCccccccCCCChHHHHHHhcceEEEEEe
Confidence            99986  9999999998643 235789999    77888999999999999999755

>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed

Probab=99.96  E-value=2.8e-28  Score=206.70  Aligned_cols=129  Identities=23%  Similarity=0.462  Sum_probs=114.1

Q ss_pred             eEEEECCcccC-CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHH
Q psy1961           2 SEIIGGGQYDE-SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQK   80 (147)
Q Consensus         2 a~v~~GG~~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~   80 (147)
                      |++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.
T Consensus       358 a~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~--~deai~~~-N~~~~gLsa~V~t~d~~~a~  434 (524)
T PRK09407        358 ATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVAD--VDEAVERA-NDTPYGLNASVWTGDTARGR  434 (524)
T ss_pred             CEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCC--HHHHHHHH-hCCCCCceEEEECCCHHHHH
Confidence            58899997432 2579999999999999999999999999999999998  69999999 99999999999999999999


Q ss_pred             HHHhhccCceeEEEEcCCCCCC-CCCCccccC----cCCCCChHHHHhhcceeceEEEec
Q psy1961          81 RCLDDLKYAAGNYYINDKSTGS-VVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETF  135 (147)
Q Consensus        81 ~~~~~~~~~~G~v~iN~~~~~~-~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~  135 (147)
                      ++++.+  ++|.|+||+...+. ..+.+||||    |.|+.+|.+++++|++.|+|+.+.
T Consensus       435 ~~~~~l--~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~  492 (524)
T PRK09407        435 AIAARI--RAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQR  492 (524)
T ss_pred             HHHHhC--CcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEcc
Confidence            999986  99999999975532 234689999    678889999999999999997553

>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

Probab=99.96  E-value=3.3e-28  Score=202.53  Aligned_cols=124  Identities=26%  Similarity=0.460  Sum_probs=112.9

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       322 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~deai~~~-n~~~~gL~~~vft~d~~~~~~  398 (450)
T cd07092         322 ARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDD--EDEAIELA-NDVEYGLASSVWTRDVGRAMR  398 (450)
T ss_pred             CEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECC--HHHHHHHH-hCCCCCceEEEECCCHHHHHH
Confidence            688999976544689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++.+  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       399 ~~~~l--~~g~v~iN~~~~~--~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~  449 (450)
T cd07092         399 LSARL--DFGTVWVNTHIPL--AAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM  449 (450)
T ss_pred             HHHhc--CccEEEECCCCCC--CCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence            99976  9999999987653  46799999    778889999999999999884

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.

>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

Probab=99.96  E-value=3.4e-28  Score=204.18  Aligned_cols=127  Identities=31%  Similarity=0.605  Sum_probs=114.0

Q ss_pred             eEEEECCcccC----CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYDE----SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||....    ..|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+
T Consensus       340 a~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~--~deai~~~-n~~~~gL~~~v~t~d~~  416 (482)
T cd07119         340 ARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDT--EEEAIRLA-NDTPYGLAGAVWTKDIA  416 (482)
T ss_pred             CEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCC--HHHHHHHH-hCCCCCceEEEECCCHH
Confidence            58899997532    2589999999999999999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEec
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETF  135 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~  135 (147)
                      .+.++++.+  ++|.|+||+...  ..+.+||||    |.|+.+|++++++|++.|+++...
T Consensus       417 ~~~~~~~~l--~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~  474 (482)
T cd07119         417 RANRVARRL--RAGTVWINDYHP--YFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININL  474 (482)
T ss_pred             HHHHHHHhc--CcceEEECCCCC--CCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence            999999986  899999998654  346789999    678889999999999999998664

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.

>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like

Probab=99.96  E-value=2.8e-28  Score=203.17  Aligned_cols=122  Identities=30%  Similarity=0.533  Sum_probs=111.1

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      +++++||..   .|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       326 a~~l~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~deai~~~-n~~~~gL~~~v~t~d~~~a~~  399 (452)
T cd07147         326 AKLLTGGKR---DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDD--FDEALAAV-NDSKFGLQAGVFTRDLEKALR  399 (452)
T ss_pred             CEEEecCCc---CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCC--HHHHHHHH-hCCCCCceEEEECCCHHHHHH
Confidence            578888864   478999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++.+  ++|.|+||+..... .+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       400 ~~~~~--~~G~v~vN~~~~~~-~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~  451 (452)
T cd07147         400 AWDEL--EVGGVVINDVPTFR-VDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLV  451 (452)
T ss_pred             HHHHc--CcceEEECCCCCCC-CCCCCcCCccccccCCCChHHHHHHhcceeEEe
Confidence            99986  99999999976432 35789999    778899999999999999985

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.

>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

Probab=99.96  E-value=2.8e-28  Score=204.20  Aligned_cols=123  Identities=29%  Similarity=0.532  Sum_probs=111.6

Q ss_pred             eEEEECCcccC--CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHH
Q psy1961           2 SEIIGGGQYDE--SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQ   79 (147)
Q Consensus         2 a~v~~GG~~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~   79 (147)
                      |++++||....  ..|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++
T Consensus       342 a~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~a~i~s~d~~~~  418 (471)
T cd07139         342 ARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDD--EDDAVRIA-NDSDYGLSGSVWTADVERG  418 (471)
T ss_pred             CEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCC--HHHHHHHH-hCCCCCceEEEEcCCHHHH
Confidence            58899997543  3589999999999999999999999999999999998  69999999 9999999999999999999


Q ss_pred             HHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          80 KRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        80 ~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      .++++.+  ++|.|+||+..   ..+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       419 ~~~~~~l--~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~  470 (471)
T cd07139         419 LAVARRI--RTGTVGVNGFR---LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY  470 (471)
T ss_pred             HHHHHhC--CcceEEECCCC---CCCCCCCCCcccccCCccchHHHHHHHhceeEEe
Confidence            9999986  99999999865   235799999    778899999999999999985

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.

>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

Probab=99.96  E-value=4.2e-28  Score=203.39  Aligned_cols=127  Identities=30%  Similarity=0.551  Sum_probs=113.0

Q ss_pred             eEEEECCcccC----CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYDE----SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||....    ..|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+
T Consensus       341 a~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~v~t~d~~  417 (478)
T cd07131         341 ATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSS--LEEAIEIA-NDTEYGLSSAIYTEDVN  417 (478)
T ss_pred             CEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCC--HHHHHHHH-hCCCCcceEEEEcCCHH
Confidence            57888986532    3589999999999999999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceeceEEEe
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~v~~~  134 (147)
                      ++.++++.+  ++|.|+||+...+. .+.+||||    |.| +++|.+++++|++.|+|+..
T Consensus       418 ~a~~~~~~l--~~G~v~iN~~~~~~-~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~  476 (478)
T cd07131         418 KAFRARRDL--EAGITYVNAPTIGA-EVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVD  476 (478)
T ss_pred             HHHHHHHhc--CccEEEECCCCCCC-CCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEe
Confidence            999999986  99999999987643 46799999    666 67789999999999999754

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.

>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like

Probab=99.96  E-value=3.6e-28  Score=201.64  Aligned_cols=125  Identities=26%  Similarity=0.435  Sum_probs=113.2

Q ss_pred             eEEEECCcccC-CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHH
Q psy1961           2 SEIIGGGQYDE-SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQK   80 (147)
Q Consensus         2 a~v~~GG~~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~   80 (147)
                      +++++||..+. ..|+|++|||+.+++++|++++||+||||++|++|+|  .||||+++ |+++|||+++|||+|.+.+.
T Consensus       302 a~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~--~deai~~~-n~~~~gL~~~v~t~d~~~~~  378 (432)
T cd07105         302 AKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKD--EEEAVRIA-NDSEYGLSAAVFTRDLARAL  378 (432)
T ss_pred             CEEEeCCCcCCCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCC--HHHHHHHH-hCCCCCceEEEEcCCHHHHH
Confidence            57889987642 3589999999999999999999999999999999998  69999999 99999999999999999999


Q ss_pred             HHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          81 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        81 ~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      ++++.+  ++|.|+||+...+. .+.+||||    |.|+.+|++++++|++.|+++
T Consensus       379 ~~~~~l--~~g~v~vN~~~~~~-~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~  431 (432)
T cd07105         379 AVAKRI--ESGAVHINGMTVHD-EPTLPHGGVKSSGYGRFNGKWGIDEFTETKWIT  431 (432)
T ss_pred             HHHHhC--CcCeEEECCCCCCC-CCCCCCCCcccccccccChHHHHHHhhceEEEe
Confidence            999976  99999999987543 46799999    778889999999999999985

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.

>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like

Probab=99.96  E-value=3.3e-28  Score=202.38  Aligned_cols=122  Identities=29%  Similarity=0.518  Sum_probs=110.5

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..   .|+|++|||+.+++++|++++||+||||++|++|+|  .||||+++ |+++|||+++|||+|.+++.+
T Consensus       316 a~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~a~v~t~d~~~a~~  389 (443)
T cd07152         316 ARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDS--DEEAVALA-NDTEYGLSAGIISRDVGRAMA  389 (443)
T ss_pred             CEEEeccCc---CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCC--HHHHHHHH-hCCCccceEEEECCCHHHHHH
Confidence            578888864   479999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~v~  132 (147)
                      +++.+  ++|.|+||+...+. .+.+||||    |.| +.+|++++++|++.|+++
T Consensus       390 ~~~~l--~~G~v~iN~~~~~~-~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~  442 (443)
T cd07152         390 LADRL--RTGMLHINDQTVND-EPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVT  442 (443)
T ss_pred             HHHhC--CcCeEEECCCCCCC-CCCCCCCCcccccCCCccCcHHHHHHhhceeEEe
Confidence            99976  99999999987653 46799999    667 677899999999999875

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.

>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

Probab=99.96  E-value=2.1e-28  Score=203.52  Aligned_cols=125  Identities=31%  Similarity=0.475  Sum_probs=113.4

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      +++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       307 ~~v~~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~--~deai~~a-n~~~~gL~~~v~t~d~~~a~~  382 (436)
T cd07135         307 GKVVIGGEMDE-ATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDD--LDEAIKVI-NSRDTPLALYIFTDDKSEIDH  382 (436)
T ss_pred             CeEEECCCcCC-CCCEEccEEEecCCCccHHHhccccCCceEEEecCC--HHHHHHHH-hCCCCCceEEEEcCCHHHHHH
Confidence            57889987643 689999999999999999999999999999999998  79999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++.+  ++|.|+||+...+...+.+||||    |.|+.+|.+++++|++.|++.
T Consensus       383 ~~~~l--~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~  435 (436)
T cd07135         383 ILTRT--RSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV  435 (436)
T ss_pred             HHhcC--CcCeEEECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence            99976  99999999876554456799999    778899999999999999874

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.

>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

Probab=99.96  E-value=4.4e-28  Score=202.12  Aligned_cols=125  Identities=29%  Similarity=0.532  Sum_probs=112.8

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      +++++||..+...|+|++|||+.+++++|++++||+||||++|++|+|  .||||+++ |+++|||+++|||+|.+.+.+
T Consensus       323 a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~ifs~d~~~~~~  399 (453)
T cd07115         323 ARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRD--EEEALRIA-NGTEYGLAAGVWTRDLGRAHR  399 (453)
T ss_pred             CEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCC--HHHHHHHH-hCCCCCCeEEEECCCHHHHHH
Confidence            578899876543689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      +++.+  ++|.|+||+...  ..+.+||||    |.|+.+|.+++++|++.|+++.
T Consensus       400 ~~~~l--~~G~v~iN~~~~--~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~  451 (453)
T cd07115         400 VAAAL--KAGTVWINTYNR--FDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWV  451 (453)
T ss_pred             HHHhc--CccEEEECCCCC--CCCCCCCCCcccccCCcCchHHHHHHhhceEEEEE
Confidence            99986  999999998643  346799999    6788899999999999999864

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.

>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

Probab=99.96  E-value=3e-28  Score=203.56  Aligned_cols=124  Identities=28%  Similarity=0.514  Sum_probs=112.3

Q ss_pred             eEEEECCcccC--CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHH
Q psy1961           2 SEIIGGGQYDE--SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQ   79 (147)
Q Consensus         2 a~v~~GG~~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~   79 (147)
                      +++++||....  ..|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+.+
T Consensus       329 a~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~--~deai~~~-n~~~~gL~~~v~t~d~~~~  405 (459)
T cd07089         329 ARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDD--DDEAVRIA-NDSDYGLSGGVWSADVDRA  405 (459)
T ss_pred             CEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCC--HHHHHHHH-hCCCCCCeEEEEcCCHHHH
Confidence            68899997543  3689999999999999999999999999999999998  69999999 9999999999999999999


Q ss_pred             HHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          80 KRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        80 ~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      .++++.+  ++|.|+||+...  ..+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       406 ~~~~~~~--~~G~v~iN~~~~--~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~  458 (459)
T cd07089         406 YRVARRI--RTGSVGINGGGG--YGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA  458 (459)
T ss_pred             HHHHHhc--CcCeEEECCCCC--CCCCCCcCCcccccCCCCchHHHHHHhhceeEEe
Confidence            9999976  999999998764  346789999    778889999999999999985

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.

>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

Probab=99.96  E-value=4e-28  Score=202.57  Aligned_cols=125  Identities=24%  Similarity=0.494  Sum_probs=112.5

Q ss_pred             eEEEECCcccC-----CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCH
Q psy1961           2 SEIIGGGQYDE-----SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDE   76 (147)
Q Consensus         2 a~v~~GG~~~~-----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~   76 (147)
                      |++++||....     +.|+|++|||+.+++++|++++||+||||++|++|++  .||||+++ |+++|||+++|||+|.
T Consensus       321 a~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~--~deai~~~-n~~~~gLsa~i~t~d~  397 (457)
T cd07090         321 AKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDT--EEEVIRRA-NDTTYGLAAGVFTRDL  397 (457)
T ss_pred             CEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECC--HHHHHHHH-hCCCcCceEEEEcCCH
Confidence            68899997531     2589999999999999999999999999999999998  69999999 9999999999999999


Q ss_pred             HHHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          77 SFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        77 ~~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      +.+.++++.+  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|+++.
T Consensus       398 ~~~~~~~~~l--~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~  454 (457)
T cd07090         398 QRAHRVIAQL--QAGTCWINTYNIS--PVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYV  454 (457)
T ss_pred             HHHHHHHHhC--CcCeEEECCCCCC--CCCCCcCCCccCcCCccchHHHHHHHhCeEEEEE
Confidence            9999999976  9999999986543  35789999    7788899999999999999864

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.

>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

Probab=99.96  E-value=3.1e-28  Score=203.21  Aligned_cols=124  Identities=28%  Similarity=0.486  Sum_probs=112.2

Q ss_pred             eEEEECCcccC--CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHH
Q psy1961           2 SEIIGGGQYDE--SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQ   79 (147)
Q Consensus         2 a~v~~GG~~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~   79 (147)
                      |++++||..+.  ..|+|++|||+.+++++|++++||+||||++|++|++  .||||+++ |+++|||+++|||+|.+++
T Consensus       326 a~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~v~t~d~~~~  402 (456)
T cd07110         326 ARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFAT--EDEAIALA-NDSEYGLAAAVISRDAERC  402 (456)
T ss_pred             CEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCC--HHHHHHHH-hCCCCCceEEEECCCHHHH
Confidence            58899987543  3589999999999999999999999999999999998  69999999 9999999999999999999


Q ss_pred             HHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          80 KRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        80 ~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      .++++.+  ++|.|+||+...  ..+.+||||    |.|+.+|++++++|++.|+++
T Consensus       403 ~~~~~~l--~~G~v~iN~~~~--~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~  455 (456)
T cd07110         403 DRVAEAL--EAGIVWINCSQP--CFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT  455 (456)
T ss_pred             HHHHHhC--CcceEEECCCCC--CCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence            9999986  999999998654  346799999    778889999999999999985

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.

>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp

Probab=99.96  E-value=4.4e-28  Score=201.93  Aligned_cols=124  Identities=19%  Similarity=0.306  Sum_probs=111.9

Q ss_pred             eEEEECCccc---CCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHH
Q psy1961           2 SEIIGGGQYD---ESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESF   78 (147)
Q Consensus         2 a~v~~GG~~~---~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~   78 (147)
                      |++++||...   ...|+|++|||+.+++++|++++||+||||++|++|+|  .||||+++ |+++|||+++|||+|.++
T Consensus       321 a~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~i~t~d~~~  397 (452)
T cd07102         321 ARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKS--DAEAIALM-NDSEYGLTASVWTKDIAR  397 (452)
T ss_pred             CEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCC--HHHHHHHH-hCCCCCceEEEEcCCHHH
Confidence            5788998642   23689999999999999999999999999999999998  69999999 999999999999999999


Q ss_pred             HHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          79 QKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        79 ~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +.++++.+  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       398 ~~~~~~~l--~~G~v~iN~~~~~--~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~  451 (452)
T cd07102         398 AEALGEQL--ETGTVFMNRCDYL--DPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYH  451 (452)
T ss_pred             HHHHHHHc--CcceEEECCCCCC--CCCCCCCCccccccCccchHHHHHHHhceeEEe
Confidence            99999986  9999999987643  35789999    778899999999999999874

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.

>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like

Probab=99.96  E-value=4.9e-28  Score=202.40  Aligned_cols=127  Identities=31%  Similarity=0.508  Sum_probs=113.7

Q ss_pred             eEEEECCcccC----CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYDE----SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||....    ..|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+
T Consensus       329 a~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gLsa~i~t~d~~  405 (465)
T cd07098         329 ARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASD--DEEAVEIA-NSTEYGLGASVFGKDIK  405 (465)
T ss_pred             CEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCC--HHHHHHHH-hCCCCCceEEEEcCCHH
Confidence            58899886421    2589999999999999999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      .+.++++.+  ++|.|+||+..++...+.+||||    |.|+++|.+++++|++.|+++.
T Consensus       406 ~~~~~~~~l--~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~  463 (465)
T cd07098         406 RARRIASQL--ETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTE  463 (465)
T ss_pred             HHHHHHHhC--CcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEE
Confidence            999999986  99999999876544446789999    7788999999999999999864

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.

>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like

Probab=99.96  E-value=4.3e-28  Score=202.42  Aligned_cols=124  Identities=27%  Similarity=0.499  Sum_probs=113.1

Q ss_pred             eEEEECCcccC-CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHH
Q psy1961           2 SEIIGGGQYDE-SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQK   80 (147)
Q Consensus         2 a~v~~GG~~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~   80 (147)
                      |++++||..+. ..|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+.+.
T Consensus       325 a~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~vft~d~~~~~  401 (454)
T cd07118         325 ATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDT--VDEAIALA-NDTVYGLSAGVWSKDIDTAL  401 (454)
T ss_pred             CEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECC--HHHHHHHH-hCCCccceEEEECCCHHHHH
Confidence            58999997653 3689999999999999999999999999999999998  69999999 99999999999999999999


Q ss_pred             HHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          81 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        81 ~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      ++++.+  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       402 ~~~~~l--~~g~v~iN~~~~~--~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~  453 (454)
T cd07118         402 TVARRI--RAGTVWVNTFLDG--SPELPFGGFKQSGIGRELGRYGVEEYTELKTVH  453 (454)
T ss_pred             HHHHhc--CcCEEEECCCCCC--CCCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence            999976  9999999998653  46789999    778889999999999999875

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.

>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like

Probab=99.96  E-value=4.8e-28  Score=202.55  Aligned_cols=124  Identities=27%  Similarity=0.506  Sum_probs=112.1

Q ss_pred             eEEEECCcccC-CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHH
Q psy1961           2 SEIIGGGQYDE-SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQK   80 (147)
Q Consensus         2 a~v~~GG~~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~   80 (147)
                      |++++||..+. ..|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.
T Consensus       339 a~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~v~t~d~~~~~  415 (468)
T cd07088         339 ATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSS--LDEAIELA-NDSEYGLTSYIYTENLNTAM  415 (468)
T ss_pred             CEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCC--HHHHHHHH-hCCCCCceEEEECCCHHHHH
Confidence            58899997543 3689999999999999999999999999999999998  69999999 99999999999999999999


Q ss_pred             HHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          81 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        81 ~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      ++++.+  ++|.|+||+...+.  ...||||    |.|+++|++++++|++.|+++
T Consensus       416 ~~~~~l--~~g~v~iN~~~~~~--~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~  467 (468)
T cd07088         416 RATNEL--EFGETYINRENFEA--MQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY  467 (468)
T ss_pred             HHHHhC--CcceEEECCCCCCC--CCCCcCCcccccCCcCchHHHHHHHhceeEEe
Confidence            999986  99999999987543  4569999    778889999999999999884

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.

>PLN02467 betaine aldehyde dehydrogenase

Probab=99.96  E-value=8e-28  Score=203.12  Aligned_cols=126  Identities=28%  Similarity=0.499  Sum_probs=113.5

Q ss_pred             eEEEECCcccC--CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHH
Q psy1961           2 SEIIGGGQYDE--SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQ   79 (147)
Q Consensus         2 a~v~~GG~~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~   79 (147)
                      |++++||....  ..|+|++|||+.+++++|++++||+||||++|++|++  .||||+++ |+++|||+++|||+|.+.+
T Consensus       357 a~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~--~~eAi~~a-N~~~~gL~a~v~t~d~~~a  433 (503)
T PLN02467        357 ATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFST--EDEAIELA-NDSHYGLAGAVISNDLERC  433 (503)
T ss_pred             CEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeCC--HHHHHHHH-hCCCCCceEEEECCCHHHH
Confidence            68899996532  3589999999999999999999999999999999998  69999999 9999999999999999999


Q ss_pred             HHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          80 KRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        80 ~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      .++++.+  ++|.|+||+....  ...+||||    |.|+.+|.+++++|++.|++++.
T Consensus       434 ~~~~~~l--~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~~~  488 (503)
T PLN02467        434 ERVSEAF--QAGIVWINCSQPC--FCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTKY  488 (503)
T ss_pred             HHHHHhC--CcceEEECCCCCC--CCCCCcCCcccCcCCCcchHHHHHHhhCeEEEEEe
Confidence            9999986  9999999987542  35789999    67888999999999999999865

>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

Probab=99.95  E-value=5.3e-28  Score=202.02  Aligned_cols=124  Identities=27%  Similarity=0.437  Sum_probs=110.9

Q ss_pred             eEEEECCcccC---CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHH
Q psy1961           2 SEIIGGGQYDE---SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESF   78 (147)
Q Consensus         2 a~v~~GG~~~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~   78 (147)
                      |++++||....   ..|+|++|||+.+++++|++++||+||||++|++|++  .||||+++ |+++|||+++|||+|.+.
T Consensus       324 a~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~--~deai~~~-n~~~~gLs~~ift~d~~~  400 (455)
T cd07120         324 AEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDD--EAEAVALA-NDTDYGLAASVWTRDLAR  400 (455)
T ss_pred             CEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCC--HHHHHHHH-hCCCCCceEEEEcCCHHH
Confidence            57888775322   2589999999999999999999999999999999998  69999999 999999999999999999


Q ss_pred             HHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          79 QKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        79 ~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +.++++.+  ++|.|+||+....  .+.+||||    |.|+.+|++++++|++.|+++
T Consensus       401 a~~~~~~l--~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~  454 (455)
T cd07120         401 AMRVARAI--RAGTVWINDWNKL--FAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY  454 (455)
T ss_pred             HHHHHHhc--CcceEEECCCCCC--CCCCCcCCccccccCccchHHHHHHHhceeEEe
Confidence            99999976  9999999997653  35789999    778899999999999999985

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.

>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=99.95  E-value=6.1e-28  Score=203.45  Aligned_cols=123  Identities=28%  Similarity=0.470  Sum_probs=111.4

Q ss_pred             EEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHH
Q psy1961           3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRC   82 (147)
Q Consensus         3 ~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~   82 (147)
                      ++++||..+. .++|++|||+.+++++|++++||+||||++|++|+|  .||||+++ |+++|||+++|||+|.+++.++
T Consensus       365 ~i~~gg~~~~-~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gLsa~v~t~d~~~a~~~  440 (494)
T PRK09847        365 QLLLDGRNAG-LAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTS--EEQALQLA-NDSQYGLGAAVWTRDLSRAHRM  440 (494)
T ss_pred             eEEECCccCC-CCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCC--HHHHHHHH-hCCCCCceEEEEcCCHHHHHHH
Confidence            6788887543 578999999999999999999999999999999998  69999999 9999999999999999999999


Q ss_pred             HhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          83 LDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        83 ~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      ++.+  ++|.|+||+....  .+.+||||    |.|+++|.+++++|++.|+++.
T Consensus       441 ~~~l--~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~  491 (494)
T PRK09847        441 SRRL--KAGSVFVNNYNDG--DMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWI  491 (494)
T ss_pred             HHhC--CcceEEECCCCCC--CCCCCcCCCcccccCccchHHHHHHhhceEEEEE
Confidence            9986  9999999997653  35789999    7788999999999999999864

>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1

Probab=99.95  E-value=1.3e-28  Score=205.74  Aligned_cols=124  Identities=39%  Similarity=0.717  Sum_probs=111.0

Q ss_pred             eEEEECC---cccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHH
Q psy1961           2 SEIIGGG---QYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESF   78 (147)
Q Consensus         2 a~v~~GG---~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~   78 (147)
                      |++++||   ......|+|++|||+.+++++|++++||+||||++|++|++  +|||++++ |+++|||+++|||+|.+.
T Consensus       332 a~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~a~v~s~d~~~  408 (462)
T PF00171_consen  332 AKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDD--LDEAIALA-NDSEYGLTASVFSRDESR  408 (462)
T ss_dssp             SEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESS--HHHHHHHH-HHSSEESEEEEECSBHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccceeccccc--chhhhhcc-cccCCCceeEEecccccc
Confidence            6899999   23445789999999999999999999999999999999998  79999999 999999999999999999


Q ss_pred             HHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceE
Q psy1961          79 QKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSI  131 (147)
Q Consensus        79 ~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v  131 (147)
                      +.++++.+  ++|.|+||+...+.... +||||    |.|+.+|.+++++|++.|+|
T Consensus       409 ~~~~~~~l--~~g~v~iN~~~~~~~~~-~pfgG~~~SG~G~~~g~~~l~~~~~~k~V  462 (462)
T PF00171_consen  409 AERLARRL--EAGRVWINDPPTGDPDG-LPFGGFKQSGIGREGGPEGLDEFTQIKTV  462 (462)
T ss_dssp             HHHHHHHS--TSSEEEESSSSTGGTTS-SEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred             cccccccc--cccceeecCCccccccc-CCCCCcccccCCcchHHHHHHHhCCccCC
Confidence            99999986  99999999998765433 79999    67889999999999999986

2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....

>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

Probab=99.95  E-value=5.4e-28  Score=201.70  Aligned_cols=123  Identities=33%  Similarity=0.518  Sum_probs=111.2

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..+  .|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+.+.+
T Consensus       329 a~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~v~t~d~~~~~~  403 (456)
T cd07145         329 GKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKD--DEEAVEIA-NSTEYGLQASVFTNDINRALK  403 (456)
T ss_pred             CEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECC--HHHHHHHH-hCCCCCceEEEECCCHHHHHH
Confidence            5788998654  279999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++.+  ++|.|+||+..... .+.+||||    |.|+.+|++++++|++.|+++
T Consensus       404 ~~~~~--~~g~v~vN~~~~~~-~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~  455 (456)
T cd07145         404 VAREL--EAGGVVINDSTRFR-WDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIV  455 (456)
T ss_pred             HHHhC--CcceEEECCCCCCC-CCCCCCCCcccccCCcCchHHHHHHhhceeEEe
Confidence            99976  99999999876432 35789999    778899999999999999885

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.

>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

Probab=99.95  E-value=6.4e-28  Score=201.18  Aligned_cols=125  Identities=28%  Similarity=0.599  Sum_probs=112.3

Q ss_pred             eEEEECCcccC---CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHH
Q psy1961           2 SEIIGGGQYDE---SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESF   78 (147)
Q Consensus         2 a~v~~GG~~~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~   78 (147)
                      |++++||....   ..|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+.
T Consensus       322 a~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~--~deAi~~~-n~~~~gL~~~i~t~d~~~  398 (454)
T cd07109         322 ARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDD--EAEAIALA-NGTDYGLVAGVWTRDGDR  398 (454)
T ss_pred             CEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCC--HHHHHHHh-hCCCCCceEEEECCCHHH
Confidence            57888886532   3589999999999999999999999999999999998  69999999 999999999999999999


Q ss_pred             HHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          79 QKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        79 ~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +.++++.+  ++|.|+||+...+. .+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       399 ~~~~~~~l--~~g~v~iN~~~~~~-~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~  453 (454)
T cd07109         399 ALRVARRL--RAGQVFVNNYGAGG-GIELPFGGVKKSGHGREKGLEALYNYTQTKTVA  453 (454)
T ss_pred             HHHHHHhc--CcCeEEECCCCCCC-CCCCCcCCcccCcCCccchHHHHHHHhceeEEe
Confidence            99999986  99999999976333 35789999    778889999999999999885

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.

>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

Probab=99.95  E-value=6e-28  Score=201.43  Aligned_cols=122  Identities=28%  Similarity=0.443  Sum_probs=109.8

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..   .|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       324 a~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~i~t~d~~~~~~  397 (451)
T cd07146         324 ARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKD--LDEAIAIS-NSTAYGLSSGVCTNDLDTIKR  397 (451)
T ss_pred             CEEEeCCCc---CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCC--HHHHHHHH-hCCCCCceEEEECCCHHHHHH
Confidence            578888864   479999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----c-CCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----T-NDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~-~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++++  ++|.|+||+.... ..+.+||||    | +|+++|++++++|++.|+++
T Consensus       398 ~~~~l--~~G~v~iN~~~~~-~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~  450 (451)
T cd07146         398 LVERL--DVGTVNVNEVPGF-RSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS  450 (451)
T ss_pred             HHHHC--CcceEEECCCCCC-CCCCCCcCcccccCCCcccChHHHHHHHhceeEEe
Confidence            99986  9999999987543 235789999    5 46888999999999999885

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.

>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=99.95  E-value=6.9e-28  Score=201.20  Aligned_cols=123  Identities=27%  Similarity=0.420  Sum_probs=111.0

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||...  .|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       328 a~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~--~deai~~~-n~~~~gL~a~i~t~d~~~~~~  402 (455)
T cd07148         328 ARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDD--LDEAIAQA-NSLPVAFQAAVFTKDLDVALK  402 (455)
T ss_pred             CEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCC--HHHHHHHH-hCCCCCceEEEEcCCHHHHHH
Confidence            5889998754  368999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++.+  ++|.|+||+.... ..+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       403 ~~~~~--~~g~v~iN~~~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~  454 (455)
T cd07148         403 AVRRL--DATAVMVNDHTAF-RVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAV  454 (455)
T ss_pred             HHHHc--CcCeEEECCCCCC-CCCCCCCCcchhcccCCCchHHHHHHhhceeEEe
Confidence            99986  9999999987532 234689999    778899999999999999875

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

Probab=99.95  E-value=6e-28  Score=201.48  Aligned_cols=124  Identities=25%  Similarity=0.438  Sum_probs=110.5

Q ss_pred             eEEEECCcccC----CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYDE----SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||..+.    ..|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+
T Consensus       324 a~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gLs~~vft~d~~  400 (457)
T cd07108         324 ATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKD--EDEVIAMA-NDSHYGLAAYVWTRDLG  400 (457)
T ss_pred             CEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCC--HHHHHHHH-hCCCcCceeEEEcCCHH
Confidence            68899997532    3589999999999999999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHH-HhhcceeceEE
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHY-VLRWATPQSIK  132 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~-~~~f~~~k~v~  132 (147)
                      ++.++++.+  ++|.|+||+....  .+.+||||    |.|+.+|.++ +++|++.|+++
T Consensus       401 ~a~~~~~~l--~~g~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~  456 (457)
T cd07108         401 RALRAAHAL--EAGWVQVNQGGGQ--QPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN  456 (457)
T ss_pred             HHHHHHHhc--CcceEEECCCCCC--CCCCCcCCcccCcCCCCccchhHHHHhhceEEEe
Confidence            999999986  9999999998653  46789999    6677778755 79999999875

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.

>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like

Probab=99.95  E-value=8e-28  Score=200.29  Aligned_cols=122  Identities=29%  Similarity=0.518  Sum_probs=111.2

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..   .|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       325 a~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gL~a~v~t~d~~~~~~  398 (451)
T cd07150         325 AKLLTGGKY---DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKD--AEEALELA-NDTEYGLSAAILTNDLQRAFK  398 (451)
T ss_pred             CEEEeCCcc---CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCC--HHHHHHHH-hCCCCCCeEEEEeCCHHHHHH
Confidence            578888854   479999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++.+  ++|.|+||+...+. .+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       399 ~~~~l--~~G~v~iN~~~~~~-~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~  450 (451)
T cd07150         399 LAERL--ESGMVHINDPTILD-EAHVPFGGVKASGFGREGGEWSMEEFTELKWIT  450 (451)
T ss_pred             HHHhc--CcCEEEECCCCCCC-CCCCCcCCccccccCcCCcHHHHHHhheeeEEe
Confidence            99976  99999999987653 46789999    678889999999999999875

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.

>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

Probab=99.95  E-value=9.1e-28  Score=198.77  Aligned_cols=122  Identities=32%  Similarity=0.569  Sum_probs=111.1

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      +++++||..   .|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       305 ~~~~~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~~i~t~d~~~~~~  378 (431)
T cd07104         305 ARLLTGGTY---EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDD--DEEAVELA-NDTEYGLSAAVFTRDLERAMA  378 (431)
T ss_pred             CEEEeCCCC---CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECC--HHHHHHHH-hCCCCCceEEEEcCCHHHHHH
Confidence            578888864   479999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++.+  ++|.|+||+...+. .+.+||||    |.|+.+|++++++|++.|+++
T Consensus       379 ~~~~l--~~g~v~iN~~~~~~-~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~  430 (431)
T cd07104         379 FAERL--ETGMVHINDQTVND-EPHVPFGGVKASGGGRFGGPASLEEFTEWQWIT  430 (431)
T ss_pred             HHHhc--CcCeEEECCCCCCC-CCCCCCCCcccccCCccchHHHHHHhhceeEEe
Confidence            99986  99999999987654 46789999    667889999999999999885

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.

>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

Probab=99.95  E-value=1.3e-27  Score=202.41  Aligned_cols=128  Identities=35%  Similarity=0.667  Sum_probs=111.4

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      +++++||..+...|+|++|||+.++  +|++++||+||||++|++|++.++||||+++ |+++|||+++|||+|.+.+.+
T Consensus       375 ~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~-n~~~~gLta~Vft~d~~~~~~  451 (518)
T cd07125         375 AWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLDEAIEDI-NATGYGLTLGIHSRDEREIEY  451 (518)
T ss_pred             CEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHHHHHHHH-hCCCCCceEEEEeCCHHHHHH
Confidence            5788888654336899999999888  8999999999999999999932379999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++.+  ++|.|+||+...+...+.+||||    |.| ..+|.+++++|++.|+++..
T Consensus       452 ~~~~l--~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~~  507 (518)
T cd07125         452 WRERV--EAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTVSLN  507 (518)
T ss_pred             HHHhC--CcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEEEEE
Confidence            99986  99999999987654445789999    666 46789999999999998755

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.

>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

Probab=99.95  E-value=1.1e-27  Score=200.33  Aligned_cols=124  Identities=27%  Similarity=0.521  Sum_probs=111.9

Q ss_pred             eEEEECCcccC--CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHH
Q psy1961           2 SEIIGGGQYDE--SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQ   79 (147)
Q Consensus         2 a~v~~GG~~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~   79 (147)
                      |++++||..+.  ..|+|++|||+.+++++|++++||+||||++|++|++  .||||+++ |+++|||+++|||+|.+.+
T Consensus       332 a~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~i~t~d~~~~  408 (462)
T cd07112         332 ARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDS--EEEAVALA-NDSVYGLAASVWTSDLSRA  408 (462)
T ss_pred             CEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCC--HHHHHHHH-hCCCccceEEEEcCCHHHH
Confidence            57889987542  2579999999999999999999999999999999998  69999999 9999999999999999999


Q ss_pred             HHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          80 KRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        80 ~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      .++++.+  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       409 ~~~~~~l--~~g~v~iN~~~~~--~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~  461 (462)
T cd07112         409 HRVARRL--RAGTVWVNCFDEG--DITTPFGGFKQSGNGRDKSLHALDKYTELKTTW  461 (462)
T ss_pred             HHHHHhc--CcceEEECCCCCC--CCCCCCCCcccccCCccchHHHHHHHhceeEEE
Confidence            9999986  9999999987543  46789999    778899999999999999885

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.

>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

Probab=99.95  E-value=1.4e-27  Score=199.36  Aligned_cols=124  Identities=24%  Similarity=0.546  Sum_probs=111.7

Q ss_pred             eEEEECCcccC----CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYDE----SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||....    ..|+|++|||+.++++++++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+
T Consensus       325 a~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~deai~~~-n~~~~gL~~~ift~d~~  401 (457)
T cd07114         325 ARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDD--EEEAIALA-NDSEYGLAAGIWTRDLA  401 (457)
T ss_pred             CEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCC--HHHHHHHh-hCCCcCceeEEECCCHH
Confidence            57889987542    2579999999999999999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      .+.++++.+  ++|.|+||+...  ..+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       402 ~~~~~~~~l--~~g~v~iN~~~~--~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~  456 (457)
T cd07114         402 RAHRVARAI--EAGTVWVNTYRA--LSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW  456 (457)
T ss_pred             HHHHHHHhc--CcceEEECCCCC--CCCCCCCCCCccCcCCccchHHHHHHHhceeEEe
Confidence            999999986  999999998654  346789999    778889999999999999885

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.

>TIGR01804 BADH glycine betaine aldehyde dehydrogenase

Probab=99.95  E-value=1.2e-27  Score=200.17  Aligned_cols=121  Identities=29%  Similarity=0.523  Sum_probs=108.7

Q ss_pred             eEEEECCcccC----CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYDE----SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||....    ..|+|++|||+.+++++|++++||+||||++|++|+|  .||||+++ |+++|||+++|||+|.+
T Consensus       339 a~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~--~deai~~~-n~~~~gLsa~i~t~d~~  415 (467)
T TIGR01804       339 ATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSS--EDEVIARA-NDTIYGLAAGVFTADLG  415 (467)
T ss_pred             CEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCC--HHHHHHHH-hCCCCCceEEEECCCHH
Confidence            57899986532    2589999999999999999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceec
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQ  129 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k  129 (147)
                      ++.++++.+  ++|+|+||+....  .+.+||||    |.|+.+|.+++++|++.|
T Consensus       416 ~~~~~~~~l--~~G~v~iN~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~  467 (467)
T TIGR01804       416 RAHRVANQL--KAGTVWINDFHPY--PAEAPWGGYKQSGIGRENGKAGLAEYTEVK  467 (467)
T ss_pred             HHHHHHHhC--CcceEEECCCCCC--CCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence            999999986  9999999987543  35789999    778899999999999865

Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).

>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

Probab=99.95  E-value=1.5e-27  Score=198.61  Aligned_cols=124  Identities=29%  Similarity=0.471  Sum_probs=112.8

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..+...|+|++|||+.++++++.+++||+||||++|++|++  .||||+++ |+++|||+++|||+|.+.+.+
T Consensus       323 a~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~~i~t~d~~~~~~  399 (451)
T cd07103         323 AKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDT--EDEVIARA-NDTPYGLAAYVFTRDLARAWR  399 (451)
T ss_pred             CEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECC--HHHHHHHH-hCCCCCceEEEECCCHHHHHH
Confidence            578999876544689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++.+  ++|.|+||+...+  .+.+||||    |.|+++|++++++|++.|+++
T Consensus       400 ~~~~l--~~g~v~vN~~~~~--~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~  450 (451)
T cd07103         400 VAEAL--EAGMVGINTGLIS--DAEAPFGGVKESGLGREGGKEGLEEYLETKYVS  450 (451)
T ss_pred             HHHhC--CcceEEECCCCCC--CCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence            99986  9999999998754  36789999    678889999999999999874

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.

>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase

Probab=99.95  E-value=2.1e-27  Score=199.35  Aligned_cols=127  Identities=21%  Similarity=0.382  Sum_probs=112.1

Q ss_pred             eEEEECCccc--C--CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYD--E--SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~--~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||...  .  ..|+|++|||+.+++++|.+++||+||||++|++|++  ++|||+++ |+++|||+++|||+|.+
T Consensus       340 a~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~--~~eai~~~-n~~~~gl~~~v~t~d~~  416 (477)
T TIGR01722       340 AEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADT--LEEAIALI-NASPYGNGTAIFTRDGA  416 (477)
T ss_pred             CEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCC--HHHHHHHH-hCCCCCCeEEEEcCCHH
Confidence            6899998642  1  3589999999999999999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCC--CCChHHHHhhcceeceEEEe
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND--KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g--~~~g~~~~~~f~~~k~v~~~  134 (147)
                      ++.++++.+  ++|.|+||+..... .+.+||||    |.|  +++|.+++++|++.|+++..
T Consensus       417 ~~~~~~~~l--~~g~v~iN~~~~~~-~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~  476 (477)
T TIGR01722       417 AARRFQHEI--EVGQVGVNVPIPVP-LPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTR  476 (477)
T ss_pred             HHHHHHHhC--CeeeEEECCCCCCC-CCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEe
Confidence            999999986  99999999865432 45789999    666  46799999999999998754

In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.

>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

Probab=99.95  E-value=1.3e-27  Score=198.10  Aligned_cols=124  Identities=32%  Similarity=0.565  Sum_probs=111.8

Q ss_pred             EEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHH
Q psy1961           3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRC   82 (147)
Q Consensus         3 ~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~   82 (147)
                      ++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.++
T Consensus       298 ~v~~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~v~t~d~~~~~~~  373 (426)
T cd07087         298 KVVIGGQVDK-EERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDD--LDEAIEFI-NSRPKPLALYLFSEDKAVQERV  373 (426)
T ss_pred             eEEeCCccCC-CCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCC--HHHHHHHH-hCCCCCceEEEECCCHHHHHHH
Confidence            5788886543 589999999999999999999999999999999998  69999999 9999999999999999999999


Q ss_pred             HhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          83 LDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        83 ~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      .+.+  ++|.|+||+.......+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       374 ~~~l--~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~  425 (426)
T cd07087         374 LAET--SSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL  425 (426)
T ss_pred             HhcC--CcccEEECCcccccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence            9976  99999999876544446789999    778899999999999999875

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.

>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like

Probab=99.95  E-value=1.3e-27  Score=200.79  Aligned_cols=122  Identities=28%  Similarity=0.485  Sum_probs=109.5

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       352 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~--~deai~~~-n~~~~gL~~~i~t~d~~~~~~  428 (480)
T cd07111         352 ADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRT--AKEAVALA-NNTPYGLAASVWSENLSLALE  428 (480)
T ss_pred             CEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCC--HHHHHHHH-hCCCCCceEEEEcCCHHHHHH
Confidence            578888864334689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceece
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQS  130 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~  130 (147)
                      +++.+  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|+
T Consensus       429 ~~~~l--~aG~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~  477 (480)
T cd07111         429 VALSL--KAGVVWINGHNLF--DAAAGFGGYRESGFGREGGKEGLYEYLRPSW  477 (480)
T ss_pred             HHHhC--CEeeEEECCCCCC--CCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence            99875  9999999997653  35789999    7788999999999999875

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.

>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

Probab=99.95  E-value=1.7e-27  Score=199.20  Aligned_cols=123  Identities=34%  Similarity=0.580  Sum_probs=110.5

Q ss_pred             eEEEECCcccC---CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHH
Q psy1961           2 SEIIGGGQYDE---SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESF   78 (147)
Q Consensus         2 a~v~~GG~~~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~   78 (147)
                      |++++||....   ..|+|++|||+.+++++|++++||+||||++|++|+|  .||||+++ |+++|||+++|||+|.++
T Consensus       336 a~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~-n~~~~gL~a~i~t~d~~~  412 (466)
T cd07138         336 ARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDD--EDEAIAIA-NDTPYGLAGYVWSADPER  412 (466)
T ss_pred             CEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCC--HHHHHHHH-hCCCCCceEEEEcCCHHH
Confidence            68899986322   3589999999999999999999999999999999998  69999999 999999999999999999


Q ss_pred             HHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          79 QKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        79 ~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +.++++.+  ++|.|+||+..   ..+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       413 a~~~~~~l--~~G~v~iN~~~---~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~  465 (466)
T cd07138         413 ARAVARRL--RAGQVHINGAA---FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ  465 (466)
T ss_pred             HHHHHHhc--CcceEEECCCC---CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence            99999986  99999999853   246789999    678889999999999999874

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.

>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=99.95  E-value=2.3e-27  Score=197.49  Aligned_cols=122  Identities=26%  Similarity=0.508  Sum_probs=110.7

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..   .|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       327 a~v~~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gLt~~v~t~d~~~~~~  400 (453)
T cd07149         327 ARLLTGGKR---DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDT--LDEAIAMA-NDSPYGLQAGVFTNDLQKALK  400 (453)
T ss_pred             CEEEeCCCC---CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCC--HHHHHHHH-hCCCcCceEEEEcCCHHHHHH
Confidence            578888864   478999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++.+  ++|.|+||+..... .+.+||||    |.|+.+|.+++++|++.|+++
T Consensus       401 ~~~~l--~~g~v~iN~~~~~~-~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~  452 (453)
T cd07149         401 AAREL--EVGGVMINDSSTFR-VDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC  452 (453)
T ss_pred             HHHHc--CcCeEEECCCCCCC-CCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence            99986  99999999986532 35789999    778899999999999999885

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed

Probab=99.95  E-value=3.6e-27  Score=198.44  Aligned_cols=126  Identities=21%  Similarity=0.372  Sum_probs=108.6

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||....++|+|++|||+ +++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       342 a~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~--~deai~~~-N~~~~gL~a~v~t~d~~~~~~  417 (487)
T PRK09457        342 GKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDD--FDEAIRLA-NNTRFGLSAGLLSDDREDYDQ  417 (487)
T ss_pred             CEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCC--HHHHHHHH-hCCCCCceEEEEcCCHHHHHH
Confidence            5778877543346799999999 6999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEec
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETF  135 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~  135 (147)
                      +++.+  ++|.|+||+...+. .+.+||||    |.|+++|. ...+|++.|+++...
T Consensus       418 ~~~~l--~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~g~-~~~~~~~~k~~~~~~  471 (487)
T PRK09457        418 FLLEI--RAGIVNWNKPLTGA-SSAAPFGGVGASGNHRPSAY-YAADYCAYPMASLES  471 (487)
T ss_pred             HHHhC--CcceEEEECCCCCC-CCCCCCCCcccccCCCCCch-hHhhheeeeEEEEec
Confidence            99986  99999999886653 45789999    77888884 445699999887553

>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase

Probab=99.95  E-value=2.1e-27  Score=200.94  Aligned_cols=128  Identities=23%  Similarity=0.404  Sum_probs=109.3

Q ss_pred             eEEEECCccc-------CCCCceEecEEEEeCCC--CCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEE
Q psy1961           2 SEIIGGGQYD-------ESCGYFIQPTIVQTKDP--LEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVF   72 (147)
Q Consensus         2 a~v~~GG~~~-------~~~g~~~~Ptvl~~v~~--~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vf   72 (147)
                      |++++||...       ...|+|++||||.++++  +|++++||+||||++|++|++  .||||+++ |+++|||++|||
T Consensus       354 A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eE~FGPVl~V~~~~~--~deai~~a-N~~~~gL~asvf  430 (513)
T cd07128         354 AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDS--LAEAIELA-ARGRGSLVASVV  430 (513)
T ss_pred             CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchHHhCCCcCCeEEEEeeCC--HHHHHHHH-hcCCCCeeEEEE
Confidence            6899999642       13589999999998887  489999999999999999998  69999999 999999999999


Q ss_pred             cCCHHHHHHHHhhccCceeEEEEcCCCCC-------CCCCCccccC----cCCCC-ChHHHHhhcceeceEE
Q psy1961          73 AEDESFQKRCLDDLKYAAGNYYINDKSTG-------SVVGQQPFGG----TNDKA-GGPHYVLRWATPQSIK  132 (147)
Q Consensus        73 t~d~~~~~~~~~~~~~~~G~v~iN~~~~~-------~~~~~~pfGG----~~g~~-~g~~~~~~f~~~k~v~  132 (147)
                      |+|.+++.++++.++.++|.|+||+..+.       ...+.+||||    |.|++ +|.+++++|++.|++.
T Consensus       431 t~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v~  502 (513)
T cd07128         431 TNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQ  502 (513)
T ss_pred             eCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCCCCCcccCCCCcccccHHHHHHhheeeeee
Confidence            99999999999986223999999986421       1235789999    67777 5799999999999985

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.

>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

Probab=99.95  E-value=3e-27  Score=198.02  Aligned_cols=124  Identities=25%  Similarity=0.433  Sum_probs=112.3

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||...  .|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+.+.+
T Consensus       345 a~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~--~~eai~~~-n~~~~gL~~~v~t~d~~~~~~  419 (473)
T cd07082         345 ATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVND--IEEAIELA-NKSNYGLQASIFTKDINKARK  419 (473)
T ss_pred             CEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCC--HHHHHHHH-hCCCCCceEEEEeCCHHHHHH
Confidence            5788998753  379999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      +++.+  ++|.|+||+..... .+.+||||    |.|+.+|.+++++|++.|+++.
T Consensus       420 ~~~~l--~~G~v~iN~~~~~~-~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~  472 (473)
T cd07082         420 LADAL--EVGTVNINSKCQRG-PDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVI  472 (473)
T ss_pred             HHHhC--CcceEEECCCCCCC-CCCCCCCcccccccCCCChHHHHHHhhceeEEEE
Confidence            99986  99999999976543 35689999    7788999999999999999863

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.

>KOG2451|consensus

Probab=99.95  E-value=8.2e-28  Score=193.04  Aligned_cols=126  Identities=23%  Similarity=0.358  Sum_probs=115.2

Q ss_pred             eEEEECCcccC-CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHH
Q psy1961           2 SEIIGGGQYDE-SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQK   80 (147)
Q Consensus         2 a~v~~GG~~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~   80 (147)
                      |+|++||+... ..++|++|||+.+|+.+|.+.+||+|||+.+|++|+++  ||+|+++ |+++.||++|+||+|.++..
T Consensus       368 a~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdte--eEvi~~A-Ndt~vGLAgYvfs~~~s~~~  444 (503)
T KOG2451|consen  368 AKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTE--EEVIEWA-NDTRVGLAGYVFSNNLSRLF  444 (503)
T ss_pred             CeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCH--HHHHHHh-ccCccceeeEEeccCHHHHH
Confidence            68999998543 34599999999999999999999999999999999994  9999999 99999999999999999999


Q ss_pred             HHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          81 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        81 ~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      |+.+.|  ++|+|.+|.....  .+..||||    |.|++|+.+++++|+..|.+...
T Consensus       445 rVae~L--EvGmVGvNeglis--~~~~pFGGVKeSG~GREgskyGidey~~ik~icig  498 (503)
T KOG2451|consen  445 RVAEAL--EVGMVGVNEGLIS--DAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIG  498 (503)
T ss_pred             HHHHHH--hcceeecccceec--ccccCcCCccccccCccccccchhhhhhhheeeec
Confidence            999986  9999999998763  46899999    78999999999999999998754

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=99.95  E-value=3e-27  Score=205.00  Aligned_cols=129  Identities=24%  Similarity=0.356  Sum_probs=109.5

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCC-cccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLE-KIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQK   80 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~-~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~   80 (147)
                      |++++||..+. .|+|++|||+.+++++| ++++||+||||++|++|+|  .||||+++ |+++|||++||||+|.+.+.
T Consensus       355 a~vl~GG~~~~-~g~~~~PTvl~~~~~~~~~i~~eE~FGPVl~V~~~~~--~~eai~~a-N~~~~gL~a~vft~d~~~~~  430 (663)
T TIGR02278       355 AEVRLGGPGRL-DGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGD--RAEAARLA-ARGGGSLVATLATSDPEEAR  430 (663)
T ss_pred             CEEEECCCcCC-CCeeEccEEEeeCCcchhhHHhccccCCeEEEEeeCC--HHHHHHHH-HcCCCCceEEEEeCCHHHHH
Confidence            68999996543 58999999999998876 7999999999999999998  69999999 99999999999999999999


Q ss_pred             HHHhhccCceeEEEE-cCCC-----CC-CCCCCccccC----cCCCC-ChHHHHhhcceeceEEEe
Q psy1961          81 RCLDDLKYAAGNYYI-NDKS-----TG-SVVGQQPFGG----TNDKA-GGPHYVLRWATPQSIKET  134 (147)
Q Consensus        81 ~~~~~~~~~~G~v~i-N~~~-----~~-~~~~~~pfGG----~~g~~-~g~~~~~~f~~~k~v~~~  134 (147)
                      ++++.++.++|.|+| |+..     .. ...+.+||||    |.|++ ++.+++++|++.|++...
T Consensus       431 ~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~g~~~~l~~f~~~k~v~~~  496 (663)
T TIGR02278       431 QFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGGEELGGLRSVKHYMQRTAIQGS  496 (663)
T ss_pred             HHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCcCCCccchHHHHHHhceeEEEEcC
Confidence            999976347999999 6421     11 1235689999    67777 468999999999998644

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase

Probab=99.95  E-value=9.5e-27  Score=195.71  Aligned_cols=126  Identities=21%  Similarity=0.372  Sum_probs=109.0

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||...+..|+|++|||+ +++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       340 a~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~--~~eai~~~-n~~~~gL~~~v~t~d~~~a~~  415 (484)
T TIGR03240       340 GKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDD--FDEAIAIA-NNTRFGLSAGLLSDDRELYDR  415 (484)
T ss_pred             CEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCC--HHHHHHHH-hCCCCCceEEEEcCCHHHHHH
Confidence            5677877654446789999999 5999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEec
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETF  135 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~  135 (147)
                      +++.+  ++|.|+||+...+. .+.+||||    |.|+++|..+++ |++.|+++.+.
T Consensus       416 ~~~~l--~aG~v~iN~~~~~~-~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~  469 (484)
T TIGR03240       416 FLLEI--RAGIVNWNKPLTGA-SSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEA  469 (484)
T ss_pred             HHHhC--CcceEEEECCCCCC-CCCCCcCCcccccCCCCCchHHHh-heeeeEEEEec
Confidence            99986  99999999887653 46789999    677888855554 99999988663

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.

>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like

Probab=99.95  E-value=7.6e-27  Score=194.64  Aligned_cols=124  Identities=29%  Similarity=0.550  Sum_probs=112.1

Q ss_pred             eEEEECCcccC----CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYDE----SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      +++++||..+.    ..|+|++|||+.++++++++++||+||||++|++|++  .||||+++ |.++|||+++|||+|.+
T Consensus       323 a~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gls~~i~t~d~~  399 (455)
T cd07093         323 ATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDD--EEEAIELA-NDTPYGLAAYVWTRDLG  399 (455)
T ss_pred             CEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCC--HHHHHHHH-hCCCCCceEEEECCCHH
Confidence            57899986542    2489999999999999999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      .+.++++.+  ++|.|+||+...+.  +.+||||    |.|+.+|.+++++|++.|+++
T Consensus       400 ~~~~~~~~l--~~g~v~iN~~~~~~--~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~  454 (455)
T cd07093         400 RAHRVARRL--EAGTVWVNCWLVRD--LRTPFGGVKASGIGREGGDYSLEFYTELKNVC  454 (455)
T ss_pred             HHHHHHHhC--CcceEEECCCCCCC--CCCCcCCCccCcCCCCchHHHHHHHhceeEEe
Confidence            999999986  99999999987653  5689999    678889999999999999885

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.

>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

Probab=99.95  E-value=5.2e-27  Score=194.89  Aligned_cols=122  Identities=25%  Similarity=0.425  Sum_probs=106.4

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||...+.+|+|++|||+ +++++|++++||+||||++|++|++  .||||+++ |+++|||+++|||+|.+++.+
T Consensus       304 a~~l~gg~~~~~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~--~~eai~~~-n~~~~gL~a~v~s~d~~~a~~  379 (431)
T cd07095         304 GEPLLAMERLVAGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDD--FDEAIALA-NATRFGLSAGLLSDDEALFER  379 (431)
T ss_pred             CEEEeCCCcCCCCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCC--HHHHHHHH-hCCCCCCeEEEEcCCHHHHHH
Confidence            6788998654446899999999 5999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSI  131 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v  131 (147)
                      +++++  ++|.|+||+..... .+.+||||    |.|+.+|.++++. ++.|++
T Consensus       380 ~~~~l--~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~g~~~~~~-~~~~~~  429 (431)
T cd07095         380 FLARI--RAGIVNWNRPTTGA-SSTAPFGGVGLSGNHRPSAYYAADY-CAYPVA  429 (431)
T ss_pred             HHHhC--CcceEEECCCCCCC-CCCCCCCCcccccCCCCChHHHHHH-Hhhhhc
Confidence            99986  99999999876533 45689999    7788999999994 444444

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=99.94  E-value=7.3e-27  Score=203.08  Aligned_cols=128  Identities=23%  Similarity=0.389  Sum_probs=108.3

Q ss_pred             eEEEECCccc-------CCCCceEecEEEEeCCC--CCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEE
Q psy1961           2 SEIIGGGQYD-------ESCGYFIQPTIVQTKDP--LEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVF   72 (147)
Q Consensus         2 a~v~~GG~~~-------~~~g~~~~Ptvl~~v~~--~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vf   72 (147)
                      |++++||...       ...|+|++||||.++++  ++++++||+||||++|++|++  .||||+++ |+++|||++|||
T Consensus       358 a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~i~~eEiFGPVl~V~~~~~--~~eai~~a-N~s~~gL~asvf  434 (675)
T PRK11563        358 AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDD--LDEAIELA-ARGKGSLVASLV  434 (675)
T ss_pred             CEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhhHhhccccCCceEEEecCC--HHHHHHHH-hcCCCCceEEEE
Confidence            6899999531       13589999999999998  579999999999999999998  69999999 999999999999


Q ss_pred             cCCHHHHHHHHhhccCceeEEEEcCCCC------CC-CCCCccccC----cCCCC-ChHHHHhhcceeceEE
Q psy1961          73 AEDESFQKRCLDDLKYAAGNYYINDKST------GS-VVGQQPFGG----TNDKA-GGPHYVLRWATPQSIK  132 (147)
Q Consensus        73 t~d~~~~~~~~~~~~~~~G~v~iN~~~~------~~-~~~~~pfGG----~~g~~-~g~~~~~~f~~~k~v~  132 (147)
                      |+|.+++.++++.++.++|.|+||+.+.      +. ..+.+||||    |.|++ +|.+++++|++.|++.
T Consensus       435 t~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~  506 (675)
T PRK11563        435 TADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQ  506 (675)
T ss_pred             eCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCCCcCCCCCCCCCccccchhHHHHhheeeeee
Confidence            9999999999998621399999997532      11 125789999    67777 5699999999999975

>PRK11903 aldehyde dehydrogenase; Provisional

Probab=99.94  E-value=1.4e-26  Score=196.19  Aligned_cols=131  Identities=21%  Similarity=0.372  Sum_probs=108.2

Q ss_pred             eEEEECCccc------CCCCceEecEEEEeCCC--CCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEc
Q psy1961           2 SEIIGGGQYD------ESCGYFIQPTIVQTKDP--LEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFA   73 (147)
Q Consensus         2 a~v~~GG~~~------~~~g~~~~Ptvl~~v~~--~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft   73 (147)
                      |++++||...      ...|+|++||||.++++  +|.+++||+||||++|++|++  .||||+++ |+++|||++||||
T Consensus       358 a~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~~eE~FGPvl~V~~~~~--~~eai~~~-N~~~~gL~asvft  434 (521)
T PRK11903        358 AEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRD--AAHALALA-RRGQGSLVASVYS  434 (521)
T ss_pred             CEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHHhCcccCCeEEEEeeCC--HHHHHHHH-hcCCCCceEEEEe
Confidence            6899998642      12589999999987654  468999999999999999998  69999999 9999999999999


Q ss_pred             CCHHHHHHHHhhccCceeEEEEcCCCC-------CCCCCCccccC----cCCCC-ChHHHHhhcceeceEEEec
Q psy1961          74 EDESFQKRCLDDLKYAAGNYYINDKST-------GSVVGQQPFGG----TNDKA-GGPHYVLRWATPQSIKETF  135 (147)
Q Consensus        74 ~d~~~~~~~~~~~~~~~G~v~iN~~~~-------~~~~~~~pfGG----~~g~~-~g~~~~~~f~~~k~v~~~~  135 (147)
                      +|.+++.++++.++.++|+|+||+...       ....+.+||||    |.|++ ++.+++++|++.|++...+
T Consensus       435 ~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~~~~  508 (521)
T PRK11903        435 DDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGGPGRAGGGEELGGLRALAFYHRRSAVQASP  508 (521)
T ss_pred             CCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCCCCCCcCcCCcccccHHHHHHHhccceeeCCH
Confidence            999999999997422799999998642       11235789999    66777 4589999999988887543

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=99.94  E-value=2.7e-26  Score=206.21  Aligned_cols=128  Identities=35%  Similarity=0.641  Sum_probs=112.2

Q ss_pred             eEEEECCcccC--CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHH
Q psy1961           2 SEIIGGGQYDE--SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQ   79 (147)
Q Consensus         2 a~v~~GG~~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~   79 (147)
                      +++++||..++  ..|+|++|||+.  .+++.+++||+||||++|++|+++++||||+++ |+++|||+++|||+|.+++
T Consensus       892 a~vl~gg~~~~~~~~G~fv~PTvi~--~~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~i-N~t~yGLt~~IfS~d~~~~  968 (1038)
T PRK11904        892 ARLLAQLPLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASDLDKVIDAI-NATGYGLTLGIHSRIEETA  968 (1038)
T ss_pred             CEEEeCCCCCCCCCCceEEeeEEEc--cCCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHH-hCCCCCCEEEEEcCCHHHH
Confidence            57899987543  258999999996  357788999999999999999865689999999 9999999999999999999


Q ss_pred             HHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceeceEEEe
Q psy1961          80 KRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        80 ~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~v~~~  134 (147)
                      .++.+.+  ++|.|+||+..++.....+||||    |.| +.||++++.+|++.|+|+++
T Consensus       969 ~~~~~~l--~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~~ktv~~~ 1026 (1038)
T PRK11904        969 DRIADRV--RVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFATEKTVTVN 1026 (1038)
T ss_pred             HHHHHhC--CEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhceEEEEEc
Confidence            9999986  99999999988776556789999    555 57899999999999999865

>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family

Probab=99.94  E-value=6e-26  Score=187.63  Aligned_cols=125  Identities=34%  Similarity=0.658  Sum_probs=113.3

Q ss_pred             eEEEECCcccCC-CCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHH
Q psy1961           2 SEIIGGGQYDES-CGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQK   80 (147)
Q Consensus         2 a~v~~GG~~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~   80 (147)
                      +++++||..+.. .|.|++|||+.++++++++++||+||||++|++|++  +||||+++ |+.++||+++|||+|.+.+.
T Consensus       302 ~~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~~l~~~i~t~d~~~~~  378 (432)
T cd07078         302 AKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKD--EEEAIELA-NDTEYGLAAGVFTRDLERAL  378 (432)
T ss_pred             CEEEeCCccCCCCCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCC--HHHHHHHH-hCCCcCceEEEECCCHHHHH
Confidence            578888876532 479999999999999999999999999999999998  79999999 99999999999999999999


Q ss_pred             HHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          81 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        81 ~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +++..+  ++|.|+||+...+ ..+.+||||    |.|+.+|++++++|++.|+++
T Consensus       379 ~~~~~~--~~g~v~iN~~~~~-~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~  431 (432)
T cd07078         379 RVAERL--EAGTVWINDYSVG-AEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT  431 (432)
T ss_pred             HHHHhc--CcceEEECCCCCC-CCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence            999986  9999999998876 457899999    667889999999999999885

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer

>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

Probab=99.93  E-value=7.2e-26  Score=188.60  Aligned_cols=128  Identities=23%  Similarity=0.335  Sum_probs=106.5

Q ss_pred             eEEEECCccc------CCCCceEecEEEEeCCCCC---cccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEE
Q psy1961           2 SEIIGGGQYD------ESCGYFIQPTIVQTKDPLE---KIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVF   72 (147)
Q Consensus         2 a~v~~GG~~~------~~~g~~~~Ptvl~~v~~~~---~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vf   72 (147)
                      |++++||...      ...|+|++|||+.+++++|   ++++||+||||++|++|+|++.+|||+++ |+++|||+++||
T Consensus       298 a~~~~gg~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~-n~~~~gL~~~v~  376 (442)
T cd07084         298 SVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELL-ERMHGSLTAAIY  376 (442)
T ss_pred             cEEEeCCcccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHH-HhCCCCeeEEEE
Confidence            6889998642      1248999999999999997   99999999999999999985569999999 999999999999


Q ss_pred             cCCHHHHHHHHhhccCceeEEEEcCCCCCCCCCCccccC-----cCCCCC-hHHHHhhcceeceE
Q psy1961          73 AEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKAG-GPHYVLRWATPQSI  131 (147)
Q Consensus        73 t~d~~~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG-----~~g~~~-g~~~~~~f~~~k~v  131 (147)
                      |+|.+.+.++++.+. ++|+|+||+..+....+..||||     |.|++. |.+++.+|++...+
T Consensus       377 t~d~~~~~~~~~~l~-~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~  440 (442)
T cd07084         377 SNDPIFLQELIGNLW-VAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE  440 (442)
T ss_pred             eCCHHHHHHHHHHHH-hcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence            999999999999732 89999999762222345678888     335564 89999999987654

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.

>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase

Probab=99.93  E-value=7.2e-26  Score=189.10  Aligned_cols=123  Identities=24%  Similarity=0.399  Sum_probs=104.9

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCC---CCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCC--H
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKD---PLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAED--E   76 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~---~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d--~   76 (147)
                      |++++||... .+|+|++|||+..+.   ++|++++||+||||++|++|++  .||||+++ |+++|||+++|||+|  .
T Consensus       314 a~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~--~~eai~~~-n~~~~gL~a~vft~d~~~  389 (454)
T cd07129         314 VRVLAGGAAA-EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDD--AAELLAVA-EALEGQLTATIHGEEDDL  389 (454)
T ss_pred             cEEEeCCCcC-CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCC--HHHHHHHH-hcCCCCcEEEEEccCchH
Confidence            6899999754 368999999998555   6899999999999999999998  69999999 999999999999999  7


Q ss_pred             HHHHHHHhhccCceeEEEEcCCCCCCCC-CCccccC-----cCCCC--ChHHHHhhccee
Q psy1961          77 SFQKRCLDDLKYAAGNYYINDKSTGSVV-GQQPFGG-----TNDKA--GGPHYVLRWATP  128 (147)
Q Consensus        77 ~~~~~~~~~~~~~~G~v~iN~~~~~~~~-~~~pfGG-----~~g~~--~g~~~~~~f~~~  128 (147)
                      +.+.++++.++.++|+|+||+...+... +.+||||     |.|++  +|.+++++|+++
T Consensus       390 ~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~  449 (454)
T cd07129         390 ALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRP  449 (454)
T ss_pred             HHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhccc
Confidence            8899999975336999999987654321 4789999     45666  589999999986

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.

>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Probab=99.93  E-value=1.9e-25  Score=188.57  Aligned_cols=111  Identities=38%  Similarity=0.666  Sum_probs=98.8

Q ss_pred             CCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHHHhhccCceeEE
Q psy1961          14 CGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNY   93 (147)
Q Consensus        14 ~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~~~~~~~~~G~v   93 (147)
                      .|+|++|||+.+  ++|.+++||+||||++|++|+++++||||+++ |+++|||+++|||+|.+.+.++++.+  ++|.|
T Consensus       384 ~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~-N~~~~gLs~~vfT~d~~~~~~~~~~l--~~G~v  458 (500)
T TIGR01238       384 HGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKARELDQIVDQI-NQTGYGLTMGVHSRIETTYRWIEKHA--RVGNC  458 (500)
T ss_pred             CCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCCCCHHHHHHHH-hCCCCCCeEEEEeCCHHHHHHHHHhC--CcceE
Confidence            589999999973  68899999999999999999854489999999 99999999999999999999999986  99999


Q ss_pred             EEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceec
Q psy1961          94 YINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQ  129 (147)
Q Consensus        94 ~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k  129 (147)
                      +||+...+...+.+||||    |.| +.+|.+++++|++.|
T Consensus       459 ~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~~k  499 (500)
T TIGR01238       459 YVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQ  499 (500)
T ss_pred             EECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHhhc
Confidence            999977654335679999    667 689999999999876

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.

>KOG2454|consensus

Probab=99.92  E-value=1.1e-25  Score=181.20  Aligned_cols=125  Identities=25%  Similarity=0.369  Sum_probs=113.5

Q ss_pred             eEEEECCccc----CCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYD----ESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |+++.||.+-    ...|.|++||+|.+++++|.|++||.||||++|+++++.  |++|+++ |+++|||.++||+.|..
T Consensus       397 Arl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~--eh~i~lA-N~s~fgLG~sVFg~dk~  473 (583)
T KOG2454|consen  397 ARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTD--EHVIKLA-NDSRFGLGCSVFGGDKH  473 (583)
T ss_pred             chhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCCh--HHHHhhc-cCCcccccceeccccHH
Confidence            6788898742    346899999999999999999999999999999999995  9999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      ++++++.++  ++|.|-|||..... ..++||||    |.|+.+|.++++..+..|+|.
T Consensus       474 ~c~y~a~~l--qtG~vAiNDFasfY-~cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~  529 (583)
T KOG2454|consen  474 RCKYIASQL--QTGVVAINDFASFY-MCQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVA  529 (583)
T ss_pred             HHHHHHhhh--hccceeehhhhhhh-eeccccCCccCCCccccccHHHHHHHhccccee
Confidence            999999986  99999999986543 56899999    778899999999999999984

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=99.92  E-value=1.9e-24  Score=196.45  Aligned_cols=127  Identities=30%  Similarity=0.491  Sum_probs=107.8

Q ss_pred             EEEECCcccC-CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           3 EIIGGGQYDE-SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         3 ~v~~GG~~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      +++.|+.... ..|+|++|||+. + +++.+++||+||||++|++|+++++||+|+++ |+++|||+++|||+|.+.+.+
T Consensus       886 ~l~~g~~~~~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~i-N~t~yGLt~~I~S~d~~~~~~  962 (1208)
T PRK11905        886 LVHQLPLPAETEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFKADELDRVIDDI-NATGYGLTFGLHSRIDETIAH  962 (1208)
T ss_pred             EEEEccCCCCCCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeCCCCHHHHHHHH-hcCCCCceEEEEcCCHHHHHH
Confidence            3444443221 368999999997 3 57889999999999999999865699999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +.+.+  ++|.|+||+..++.....+||||    |.| +.||++++.+|++.|+++..
T Consensus       963 ~~~~l--~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~v~~~ 1018 (1208)
T PRK11905        963 VTSRI--RAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAPTPIP 1018 (1208)
T ss_pred             HHHhC--CEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcceeecc
Confidence            99986  99999999988776556789999    555 47899999999999998643

>KOG2452|consensus

Probab=99.92  E-value=6.6e-25  Score=180.56  Aligned_cols=127  Identities=28%  Similarity=0.446  Sum_probs=117.4

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |+++|||.+.++.|.|++|||++++.+.|.+.+||.||||+.|.+|+|.|+|+++.++ |+++|||+++|||+|..+..+
T Consensus       749 a~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ra-n~tefgla~gvftrd~~k~l~  827 (881)
T KOG2452|consen  749 ATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRA-NATEFGLASGVFTRDINKALY  827 (881)
T ss_pred             cEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhc-cccccccccceeecccchhhh
Confidence            7899999988889999999999999999999999999999999999999999999999 999999999999999988889


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      +.+.+  ++|+|+||.+....  -..||||    |-|..-|..++.+|.+.|+++.
T Consensus       828 v~~~l--~agtvfvnty~ktd--vaapfggfkqsgfgkd~ge~alneyl~~ktit~  879 (881)
T KOG2452|consen  828 VSDKL--QAGTVFVNTYNKTD--VAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTF  879 (881)
T ss_pred             hhhhh--ccceEEEeeccccc--cccCCCCccccccccchhHHHHhhheeeEEEEe
Confidence            88876  99999999987643  4689999    6677789999999999999874

>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

Probab=99.92  E-value=2.4e-24  Score=181.37  Aligned_cols=106  Identities=25%  Similarity=0.360  Sum_probs=90.5

Q ss_pred             eEEEECCcccCC----CC-ceEecEEEEe------CCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEE
Q psy1961           2 SEIIGGGQYDES----CG-YFIQPTIVQT------KDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGA   70 (147)
Q Consensus         2 a~v~~GG~~~~~----~g-~~~~Ptvl~~------v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~   70 (147)
                      |++++||..+..    .| .|++|||+..      ++++|++++||+||||++|++|+|+++||||+++ |+++|||++|
T Consensus       341 a~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~~~deai~~a-N~~~~gL~~~  419 (489)
T cd07126         341 AKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEAL-ERMHAHLTAA  419 (489)
T ss_pred             CEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEEEEEEECCCCHHHHHHHH-hCCCCCceEE
Confidence            689999976432    23 3899999952      5779999999999999999999985468999999 9999999999


Q ss_pred             EEcCCHHHHHHHHhhccCceeE--EEEcCCCCCCCCCC---ccccC
Q psy1961          71 VFAEDESFQKRCLDDLKYAAGN--YYINDKSTGSVVGQ---QPFGG  111 (147)
Q Consensus        71 vft~d~~~~~~~~~~~~~~~G~--v~iN~~~~~~~~~~---~pfGG  111 (147)
                      |||+|.+++.++++++  ++|+  |+||+..++.. ..   .||||
T Consensus       420 vft~d~~~~~~~~~~~--~~G~~~v~~n~~~~~~~-~~~~~~pfgg  462 (489)
T cd07126         420 VVSNDIRFLQEVLANT--VNGTTYAGIRARTTGAP-QNHWFGPAGD  462 (489)
T ss_pred             EEeCCHHHHHHHHHhC--CcceEEEEecCCCCCCC-cccCcCCCCC
Confidence            9999999999999986  9999  67998877653 33   89999

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=99.91  E-value=1.3e-23  Score=191.59  Aligned_cols=124  Identities=30%  Similarity=0.575  Sum_probs=105.3

Q ss_pred             eEEEECCcccC---CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHH
Q psy1961           2 SEIIGGGQYDE---SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESF   78 (147)
Q Consensus         2 a~v~~GG~~~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~   78 (147)
                      ++++.||....   ..|+|++|||+..  +++.+++||+||||++|++|+++++||+|+.+ |+++|||+++|||+|.++
T Consensus       980 ~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~i-N~t~yGLt~gV~Srd~~~ 1056 (1318)
T PRK11809        980 RPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDELIEQI-NASGYGLTLGVHTRIDET 1056 (1318)
T ss_pred             CEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHHHHHHH-hcCCCCceEEEEeCCHHH
Confidence            35666664321   3589999999973  56788999999999999999855589999999 999999999999999999


Q ss_pred             HHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceece
Q psy1961          79 QKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQS  130 (147)
Q Consensus        79 ~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~  130 (147)
                      +.++.+.+  ++|.|+||+..++.....+||||    |.| +.||++++.+|+..+.
T Consensus      1057 ~~~v~~~l--~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809       1057 IAQVTGSA--HVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred             HHHHHHhC--CEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHHHhccCC
Confidence            99999986  99999999987765545689999    555 4689999999998864

>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

Probab=99.90  E-value=3.9e-24  Score=176.55  Aligned_cols=107  Identities=20%  Similarity=0.210  Sum_probs=95.6

Q ss_pred             ceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHHHhhccCceeEEEE
Q psy1961          16 YFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYI   95 (147)
Q Consensus        16 ~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~~~~~~~~~G~v~i   95 (147)
                      .|++||    ++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.++++.+  ++|.|+|
T Consensus       290 ~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~--~deAi~~a-N~~~~GLsa~ift~d~~~a~~~~~~~--~~G~v~i  360 (406)
T cd07079         290 AILPGA----KPATEEDWGTEYLDLILAVKVVDS--LDEAIAHI-NRYGSGHTEAIVTENYETAERFLREV--DSAAVYV  360 (406)
T ss_pred             Hhcccc----cCCCcchhhhhhhCceeEEEEeCC--HHHHHHHH-HHhCCccccEeeeCCHHHHHHHHHhC--CeeEEEE
Confidence            478898    788999999999999999999998  79999999 99999999999999999999999986  9999999


Q ss_pred             cCCCCCCCCCCccccC----cC----CCCChHHHHhhcceeceEEE
Q psy1961          96 NDKSTGSVVGQQPFGG----TN----DKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        96 N~~~~~~~~~~~pfGG----~~----g~~~g~~~~~~f~~~k~v~~  133 (147)
                      |+.....  +.+||||    |.    |+++|.+++++|++.|++++
T Consensus       361 N~~~~~~--~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~  404 (406)
T cd07079         361 NASTRFT--DGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVR  404 (406)
T ss_pred             eCCCccc--CCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEe
Confidence            9876532  4679998    22    67789999999999999863

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).

>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like

Probab=99.90  E-value=5.1e-24  Score=177.01  Aligned_cols=121  Identities=13%  Similarity=0.180  Sum_probs=97.9

Q ss_pred             eEEEECCccc---CCCCceEe---cEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCcc--EEEEEc
Q psy1961           2 SEIIGGGQYD---ESCGYFIQ---PTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYAL--TGAVFA   73 (147)
Q Consensus         2 a~v~~GG~~~---~~~g~~~~---Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL--~~~vft   73 (147)
                      |++++||...   ...|+|++   |||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||  +++|||
T Consensus       290 a~~~~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~--~~eAi~~a-n~~~~GLghsa~I~t  366 (429)
T cd07121         290 NKKWVGKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKN--FDEAIELA-VELEHGNRHTAIIHS  366 (429)
T ss_pred             cccccCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCC--HHHHHHHH-HhhccCCCceEEEec
Confidence            4567777431   12477877   599999999999999999999999999998  69999999 9999999  999999


Q ss_pred             CCHHHHHHHHhhccCceeEEEEcCCCCCCCCCCccccC-cCCCC--ChHHHHhhcceeceEE
Q psy1961          74 EDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-TNDKA--GGPHYVLRWATPQSIK  132 (147)
Q Consensus        74 ~d~~~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG-~~g~~--~g~~~~~~f~~~k~v~  132 (147)
                      +|.+++.++++++  ++|+|+||+...    ..+|||| +.++.  +|+.+ +..+..|+++
T Consensus       367 ~d~~~a~~~a~~l--~aG~v~iN~~~~----~~~p~gG~k~s~~~~~~~~~-~~~~~~~~~~  421 (429)
T cd07121         367 KNVENLTKMARAM--QTTIFVKNGPSY----AGLGVGGEGYTTFTIAGPTG-EGLTSARTFT  421 (429)
T ss_pred             CCHHHHHHHHhhC--CceEEEEcCCCc----CccccCCCccceEEecCCcC-cCccChhhhh
Confidence            9999999999976  999999997643    4689999 44443  55555 4445555554

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.

>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional

Probab=99.90  E-value=1.5e-23  Score=173.68  Aligned_cols=105  Identities=22%  Similarity=0.270  Sum_probs=93.5

Q ss_pred             cEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHHHhhccCceeEEEEcCCC
Q psy1961          20 PTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKS   99 (147)
Q Consensus        20 Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~~~~~~~~~G~v~iN~~~   99 (147)
                      |||+   +.+|.+++||+||||++|++|+|  +||||+++ |+++|||++||||+|.+++.++++++  ++|.|+||+..
T Consensus       299 PTi~---~~~~~i~~eE~FGPVl~v~~~~~--~deAi~~a-N~~~~GL~a~V~t~d~~~~~~~~~~l--~~G~v~VN~~~  370 (417)
T PRK00197        299 PDVV---PATEEDWDTEYLDLILAVKVVDS--LDEAIAHI-NRYGSGHTEAIVTEDYAAAERFLNEV--DSAAVYVNAST  370 (417)
T ss_pred             cccc---cCCcchhhhhhhCceEEEEEeCC--HHHHHHHH-HhcCCCCceEEEeCCHHHHHHHHHhC--CeeEEEEeCCC
Confidence            9998   46799999999999999999998  69999999 99999999999999999999999986  99999999876


Q ss_pred             CCCCCCCccccC----cCC----CCChHHHHhhcceeceEEEe
Q psy1961         100 TGSVVGQQPFGG----TND----KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus       100 ~~~~~~~~pfGG----~~g----~~~g~~~~~~f~~~k~v~~~  134 (147)
                      ...  +..||||    |.|    +.+|.+++++|++.|+++..
T Consensus       371 ~~~--~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~  411 (417)
T PRK00197        371 RFT--DGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLG  411 (417)
T ss_pred             ccC--CCCccccchhheeecCCCcCCCccchHhhcEEEEEEEC
Confidence            533  4689999    334    66789999999999998753

>PLN02418 delta-1-pyrroline-5-carboxylate synthase

Probab=99.88  E-value=3.2e-22  Score=174.91  Aligned_cols=113  Identities=17%  Similarity=0.176  Sum_probs=95.9

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++ +||....  |      +|. + ++|++++||+||||++|.+|++  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       574 a~l-~Gg~~~~--g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~--~dEAI~~a-N~s~yGLsa~V~T~d~~~a~~  639 (718)
T PLN02418        574 VTL-YGGPRAS--K------LLN-I-PEAQSFHHEYSSLACTVEIVDD--VHAAIDHI-HRHGSAHTDCIVTEDSEVAEI  639 (718)
T ss_pred             CEE-ECCcccc--C------eeC-C-CCchhhhCCcCCeeEEEEEECC--HHHHHHHH-hcCCCCCeeEEEcCCHHHHHH
Confidence            566 6775321  4      343 4 7899999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cC--CCCC--hHHHHhhcceeceEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TN--DKAG--GPHYVLRWATPQSIK  132 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~--g~~~--g~~~~~~f~~~k~v~  132 (147)
                      +++++  ++|.|+||+.+..  .+..||||    |.  |+.+  |++++++|++.|++.
T Consensus       640 ~a~~l--~aG~V~IN~~~~~--~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~  694 (718)
T PLN02418        640 FLRQV--DSAAVFHNASTRF--SDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWIL  694 (718)
T ss_pred             HHHhC--CeeEEEEeCCCCC--CCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEE
Confidence            99986  9999999987543  24679999    55  6554  999999999999986

>PRK15398 aldehyde dehydrogenase EutE; Provisional

Probab=99.87  E-value=2e-22  Score=168.91  Aligned_cols=109  Identities=13%  Similarity=0.182  Sum_probs=90.2

Q ss_pred             CCceE---ecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCcc--EEEEEcCCHHHHHHHHhhccC
Q psy1961          14 CGYFI---QPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYAL--TGAVFAEDESFQKRCLDDLKY   88 (147)
Q Consensus        14 ~g~~~---~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL--~~~vft~d~~~~~~~~~~~~~   88 (147)
                      .|+++   +|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||  +++|||+|.+++.++++.+  
T Consensus       335 ~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d--~deAi~~a-N~~~yGL~hs~~IfT~d~~~a~~~a~~l--  409 (465)
T PRK15398        335 AGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKD--VDEAIALA-VKLEHGNRHTAIMHSRNVDNLNKMARAI--  409 (465)
T ss_pred             CCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCC--HHHHHHHH-HhcccCCcceEEEecCCHHHHHHHHHhC--
Confidence            36666   4899999999999999999999999999998  79999999 9999999  9999999999999999986  


Q ss_pred             ceeEEEEcCCCCCCCCCCccccC-cCCC--CChHHHHhhcceeceEE
Q psy1961          89 AAGNYYINDKSTGSVVGQQPFGG-TNDK--AGGPHYVLRWATPQSIK  132 (147)
Q Consensus        89 ~~G~v~iN~~~~~~~~~~~pfGG-~~g~--~~g~~~~~~f~~~k~v~  132 (147)
                      ++|.|+||++..    +.+|||| +.+.  .+|+.+ ...|..|+++
T Consensus       410 ~~G~V~iN~~~~----~~~p~gg~~~s~~~~~~~~g-~~~~~~~~~~  451 (465)
T PRK15398        410 QTSIFVKNGPSY----AGLGLGGEGFTTFTIATPTG-EGVTSARTFT  451 (465)
T ss_pred             CceEEEECCCCc----cccCcCCCCCceeeecccCC-CCccchhhhh
Confidence            999999997642    4789999 3222  245555 5555555554

>KOG2453|consensus

Probab=99.86  E-value=4.3e-22  Score=158.13  Aligned_cols=135  Identities=19%  Similarity=0.311  Sum_probs=120.6

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      .++++||+..++.|+|++|||++ ...|.+++.+|.|.|||+|.+|++  ++||+++- |..+.||++++||+|.+.+.|
T Consensus       362 gki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~--~eea~ain-nev~qglsssift~n~~nifr  437 (507)
T KOG2453|consen  362 GKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFST--LEEAIAIN-NEVDQGLSSSIFTTNIQNIFR  437 (507)
T ss_pred             CeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccc--hhhhheec-cccccccchhhhhcCHHHHHh
Confidence            47899999877889999999998 999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEecCCCCcC
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETFVPLTEW  141 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~~~~~~~  141 (147)
                      ++.-...++|.|.||-++.+. ...-.|||    |+|++.|.+++.+|+|+.+.++++..+.++
T Consensus       438 w~gpkgsdcgivnvniptsga-eiggafggek~tgggresgsdswkqymrrstctinyskelpl  500 (507)
T KOG2453|consen  438 WMGPKGSDCGIVNVNIPTSGA-EIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTINYSKELPL  500 (507)
T ss_pred             hhCCCCCccceEEecCCCCch-hhcccccCccccCCCcccCchHHHHHHhhceeeeeccccCch
Confidence            998765699999999987764 34568999    788999999999999999998887655544

>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily

Probab=99.86  E-value=4.5e-21  Score=155.70  Aligned_cols=106  Identities=35%  Similarity=0.605  Sum_probs=97.4

Q ss_pred             EEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHHHhhccCceeEEEEcCCCC
Q psy1961          21 TIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKST  100 (147)
Q Consensus        21 tvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~~~~~~~~~G~v~iN~~~~  100 (147)
                      ||+.++++++++++||+||||++|++|++  +|||++++ |+.++||+++|||+|.+.+.+++..+  ++|.|+||+.+.
T Consensus       257 tl~~~~~~~~~~~~~E~fgPv~~v~~~~~--~~eai~~~-n~~~~gl~~~i~t~d~~~~~~~~~~~--~~g~v~iN~~~~  331 (367)
T cd06534         257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKD--EEEAIALA-NDTEYGLTAGVFTRDLNRALRVAERL--RAGTVYINDSSI  331 (367)
T ss_pred             eeeeCCCCCCccccCCccCceEEEEecCC--HHHHHHHH-hCCCCCCeEEEECCCHHHHHHHHHhC--CcceEEECCCCC
Confidence            88888899999999999999999999998  79999999 99999999999999999999999986  999999999877


Q ss_pred             CCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961         101 GSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus       101 ~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      .. .+.+||||    |.|+.+|++++++|++.|++.
T Consensus       332 ~~-~~~~pfgg~~~sG~g~~~g~~~~~~~~~~k~i~  366 (367)
T cd06534         332 GV-GPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV  366 (367)
T ss_pred             CC-CCCCCCCCcccCccCCCChHHHHHHhceEEEEe
Confidence            54 57899999    567778999999999999874

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri

>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase

Probab=99.86  E-value=4.4e-21  Score=167.82  Aligned_cols=100  Identities=18%  Similarity=0.132  Sum_probs=88.7

Q ss_pred             CCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHHHhhccCceeEEEEcCCCCCCCCC
Q psy1961          26 KDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVG  105 (147)
Q Consensus        26 v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~~~~~~~~~G~v~iN~~~~~~~~~  105 (147)
                      ++++|++++||+||||++|++|++  +||||+++ |+++|||++||||+|.+.+.++++++  ++|.|+||+....  .+
T Consensus       581 ~~~~~~i~~eE~FGPvl~v~~~~~--~deAi~~~-N~~~~gLa~~ift~d~~~a~~~~~~i--~sG~V~vN~~~~~--~~  653 (715)
T TIGR01092       581 NISETKSFRTEYSSLACTVEIVDD--VYDAIDHI-HKHGSAHTDCIVTEDENVAEFFLQHV--DSAAVFHNASTRF--SD  653 (715)
T ss_pred             CCCCchhhhccccCceEEEEEECC--HHHHHHHH-HcCCCCCeEEEEeCCHHHHHHHHHhC--CeeEEEEeCCCCC--CC
Confidence            356899999999999999999998  79999999 99999999999999999999999986  9999999987532  35


Q ss_pred             CccccC----cCCC----CChHHHHhhcceeceEE
Q psy1961         106 QQPFGG----TNDK----AGGPHYVLRWATPQSIK  132 (147)
Q Consensus       106 ~~pfGG----~~g~----~~g~~~~~~f~~~k~v~  132 (147)
                      .+||||    |.|+    .+|+.++++|++.|++.
T Consensus       654 ~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~  688 (715)
T TIGR01092       654 GFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLL  688 (715)
T ss_pred             CCCCcCccccccccCCCCCCChhHHHHhceEEEEE
Confidence            689999    4453    47899999999999986

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.

>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

Probab=99.82  E-value=2.5e-20  Score=153.38  Aligned_cols=109  Identities=14%  Similarity=0.034  Sum_probs=91.8

Q ss_pred             CceEecEEEEeCCCCCcccccccccceEEEEEcCCCC--HHHHHHHHhhCCCCccEEEEEcCCHHHHHHHHhhccCceeE
Q psy1961          15 GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKD--LDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGN   92 (147)
Q Consensus        15 g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~--~~eai~~a~n~~~~gL~~~vft~d~~~~~~~~~~~~~~~G~   92 (147)
                      ++|+.||      ++|++++||+||||++|++|+|.+  +++|++++ |+++|||+++|||+|.+++.++++.+  ++|.
T Consensus       279 ~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~-n~~~~gl~~~Ift~d~~~~~~~~~~l--~~G~  349 (397)
T cd07077         279 PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMII-ESGGGPHTRCVYTHKINKVDDFVQYI--DTAS  349 (397)
T ss_pred             eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHH-HhcCCCCceEEEeCCHHHHHHHHHhC--CEEE
Confidence            4677776      789999999999999999999831  13677789 99999999999999999999999986  9999


Q ss_pred             EEEcCCCCCCCCCCccccC------cCCCCCh-HHHHhhcceeceEE
Q psy1961          93 YYINDKSTGSVVGQQPFGG------TNDKAGG-PHYVLRWATPQSIK  132 (147)
Q Consensus        93 v~iN~~~~~~~~~~~pfGG------~~g~~~g-~~~~~~f~~~k~v~  132 (147)
                      |+||+...+.....+||||      |.|+.+| ..+++.|++.|++.
T Consensus       350 v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~  396 (397)
T cd07077         350 FYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV  396 (397)
T ss_pred             EEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence            9999987654335578888      4567778 89999999999874

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.

>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

Probab=99.81  E-value=8e-20  Score=152.31  Aligned_cols=93  Identities=12%  Similarity=0.214  Sum_probs=80.2

Q ss_pred             CCceEecE---EEEeCC--CCCcccccccccceEEEEEcCCCCHHHHHHHHhhCC----CCccEEEEEcCC---HHHHHH
Q psy1961          14 CGYFIQPT---IVQTKD--PLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST----PYALTGAVFAED---ESFQKR   81 (147)
Q Consensus        14 ~g~~~~Pt---vl~~v~--~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~----~~gL~~~vft~d---~~~~~~   81 (147)
                      .|+|++||   ++.+++  ++|++++||+||||++|++|+|  +||||+++ |++    +|||+++|||+|   .+++.+
T Consensus       300 ~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~--~dEAi~~a-N~~~n~~~~GLsa~V~T~d~~~~~~a~~  376 (439)
T cd07081         300 AGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAAN--FADADAKA-LALKLEGGCGHTSAMYSDNIKAIENMNQ  376 (439)
T ss_pred             cCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCC--HHHHHHHH-HHHhhccCCCceEEEECCCcchHHHHHH
Confidence            47899998   999888  9999999999999999999998  69999999 965    799999999999   999999


Q ss_pred             HHhhccCceeEEEEcCCC-CCCCCCCccccC
Q psy1961          82 CLDDLKYAAGNYYINDKS-TGSVVGQQPFGG  111 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~-~~~~~~~~pfGG  111 (147)
                      +++++  ++|.|+||+.. ++......-|||
T Consensus       377 ~a~~l--~~G~V~iN~~~~~~~~g~~~~~~~  405 (439)
T cd07081         377 FANAM--KTSRFVKNGPCSQGGLGDLYNFRG  405 (439)
T ss_pred             HHhhC--CceEEEEeCCccccccccccCCCC
Confidence            99976  99999999765 333223345555

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.

>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

Probab=99.80  E-value=1.8e-19  Score=153.64  Aligned_cols=123  Identities=19%  Similarity=0.206  Sum_probs=92.0

Q ss_pred             eEEEECCcccC---CCC-ceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCC--C-ccEEEEEcC
Q psy1961           2 SEIIGGGQYDE---SCG-YFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTP--Y-ALTGAVFAE   74 (147)
Q Consensus         2 a~v~~GG~~~~---~~g-~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~--~-gL~~~vft~   74 (147)
                      +++++||..+.   ..| +|++|||+..++++|++++||+||||++|++|+|  .||||+++ |++.  + ||+++|||+
T Consensus       405 g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d--~~eai~~a-n~~~~~~ggLt~sVfs~  481 (549)
T cd07127         405 GEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDS--TDHSIELA-RESVREHGAMTVGVYST  481 (549)
T ss_pred             CCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCC--HHHHHHHH-HhcccCCCCceEEEEcC
Confidence            35778886432   134 4679999998889999999999999999999998  69999999 9984  4 699999999


Q ss_pred             CHHHHHHHHhhccCceeEEEEcCCCCCCCCCCcc--ccCc-----CCCCChHHHHhhcceec
Q psy1961          75 DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQP--FGGT-----NDKAGGPHYVLRWATPQ  129 (147)
Q Consensus        75 d~~~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~p--fGG~-----~g~~~g~~~~~~f~~~k  129 (147)
                      |.+.+.++.+.+.-..|.++||+.  +....++|  |||.     +...+......+|...|
T Consensus       482 D~~~~~~~~~~~~~~~~~~~iN~t--g~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~fv~~r  541 (549)
T cd07127         482 DPEVVERVQEAALDAGVALSINLT--GGVFVNQSAAFSDFHGTGANPAANAALTDGAFVANR  541 (549)
T ss_pred             CHHHHHHHHHHHHHhcCcEEEcCC--ceEEEecCcCCCCCCCCCCCcccccccchhhhhhcc
Confidence            999999999986323449999943  33333455  9992     22344444555555443

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.

>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional

Probab=99.79  E-value=2.9e-19  Score=159.24  Aligned_cols=115  Identities=13%  Similarity=0.218  Sum_probs=100.1

Q ss_pred             CCceEecEE------EEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhC----CCCccEEEEEcCCHHHHHHHH
Q psy1961          14 CGYFIQPTI------VQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS----TPYALTGAVFAEDESFQKRCL   83 (147)
Q Consensus        14 ~g~~~~Ptv------l~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~----~~~gL~~~vft~d~~~~~~~~   83 (147)
                      .|+|++||+      +.+++++|++++ |.||||++|++|++  +||||+++ |+    ++|||+++|||+|.+++.+++
T Consensus       315 ~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~--~deAi~~~-n~~~~~~~~gl~~~i~t~d~~~~~~~~  390 (862)
T PRK13805        315 AGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKD--FEDAVEKA-EKLVEFGGLGHTAVIYTNDDELIKEFG  390 (862)
T ss_pred             cCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECC--HHHHHHHH-HHHHhcCCCCcEEEEECCCHHHHHHHH
Confidence            478899997      678899999887 78999999999998  69999999 98    479999999999999999999


Q ss_pred             hhccCceeEEEEcCCCCC--------CCCCCccccC---cCCCCChHHHHhhcceeceEEEe
Q psy1961          84 DDLKYAAGNYYINDKSTG--------SVVGQQPFGG---TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        84 ~~~~~~~G~v~iN~~~~~--------~~~~~~pfGG---~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++  ++|.|+||.+..+        ...+.+|||+   |+++.+|+.+++.|++.|+|..+
T Consensus       391 ~~l--~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~G~~g~~~~~g~~g~~~~~~~k~v~~~  450 (862)
T PRK13805        391 LRM--KACRILVNTPSSQGGIGDLYNKLAPSLTLGCGSWGGNSVSENVGAKHLLNIKTVAKR  450 (862)
T ss_pred             hhC--CccEEEEeCCccccccccccCCcCccccccccCCCCCcCCCCCCHHHhheeeeeeec
Confidence            986  9999999987521        2457899999   56677899999999999998744

>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN

Probab=99.77  E-value=1.3e-18  Score=148.29  Aligned_cols=91  Identities=16%  Similarity=0.192  Sum_probs=71.0

Q ss_pred             EEEECCccc---CCCC-ceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCC--CCc-cEEEEEcCC
Q psy1961           3 EIIGGGQYD---ESCG-YFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST--PYA-LTGAVFAED   75 (147)
Q Consensus         3 ~v~~GG~~~---~~~g-~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~--~~g-L~~~vft~d   75 (147)
                      ++++||...   ...| +|++|||+....++|++++||+||||++|++|+|  .||||+++ |++  +|| |+++|||+|
T Consensus       406 ~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d--~deAi~~a-N~~~~~~G~Lta~VfT~d  482 (551)
T TIGR02288       406 EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDD--GAHAVELA-RRSVREKGAMTVGAYTTD  482 (551)
T ss_pred             CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECC--HHHHHHHH-hcCCCCCCCceEEEEeCC
Confidence            466676532   1134 6899999953335999999999999999999998  69999999 998  566 999999999


Q ss_pred             HHHHHHHHhhccCceeEEEEc
Q psy1961          76 ESFQKRCLDDLKYAAGNYYIN   96 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~G~v~iN   96 (147)
                      .+++.++.+.+....|.++||
T Consensus       483 ~~~~~~~~~~~~~~~~~l~iN  503 (551)
T TIGR02288       483 PEVVDAVQEAAWDAAVALSLN  503 (551)
T ss_pred             HHHHHHHHHHHHHhccCeeec
Confidence            999999998742233444444

This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=99.74  E-value=4e-18  Score=142.64  Aligned_cols=112  Identities=36%  Similarity=0.668  Sum_probs=98.4

Q ss_pred             CCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHHHhhccCceeEE
Q psy1961          14 CGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNY   93 (147)
Q Consensus        14 ~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~~~~~~~~~G~v   93 (147)
                      +|.|+.||++.-.+  -.-++.|+|||||.|++|+-+++++.|+.+ |.+.|||+.+|+|+-.+.+.++.+.+  .+|.+
T Consensus       458 ~GtFv~Ptl~El~~--~~eL~rEVFGPVLHVvRy~~~~l~~vi~~I-NatGyGLT~GvHtRideti~~v~~~~--~aGNl  532 (769)
T COG4230         458 KGTFVAPTLIELEN--LDELQREVFGPVLHVVRYKRDELDEVIDQI-NATGYGLTLGVHTRIDETIAHVTERA--HAGNL  532 (769)
T ss_pred             CceeeCceeEEcCC--HHHHHHHhccceeEEEEecHHHHHHHHHHH-hccCcceeeeeecchHHHHHHHHhhc--cccce
Confidence            68999999996322  234789999999999999998899999999 99999999999999999999999976  99999


Q ss_pred             EEcCCCCCCCCCCccccC----c-CCCCChHHHHhhcceece
Q psy1961          94 YINDKSTGSVVGQQPFGG----T-NDKAGGPHYVLRWATPQS  130 (147)
Q Consensus        94 ~iN~~~~~~~~~~~pfGG----~-~g~~~g~~~~~~f~~~k~  130 (147)
                      +||+...+.....+||||    | +.+.||+.++.+|...+.
T Consensus       533 YVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp~YL~Rl~~~~p  574 (769)
T COG4230         533 YVNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLLRLVSERP  574 (769)
T ss_pred             EeeccceeeEEeeccCCCCCCCCCCCCCCChHHHHHHHhcCC
Confidence            999999888778899999    3 336789999999986544

>TIGR00407 proA gamma-glutamyl phosphate reductase

Probab=99.73  E-value=1e-17  Score=138.20  Aligned_cols=100  Identities=13%  Similarity=0.175  Sum_probs=81.2

Q ss_pred             cEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHHHhhccCceeEEEEcCCC
Q psy1961          20 PTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKS   99 (147)
Q Consensus        20 Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~~~~~~~~~G~v~iN~~~   99 (147)
                      ||++ ++  .|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.++++++  ++|.|+||+..
T Consensus       291 ~tv~-~~--~~~i~~eE~FgPvl~v~~~~~--~~eAi~~a-N~~~~GL~a~I~t~d~~~a~~~a~~i--~~G~v~iN~~~  362 (398)
T TIGR00407       291 ATEA-IV--CKTDFDKEFLSLDLSVKIVES--LEAAIQHI-NQYGTQHSDAILTENKANAEQFQNGV--DSAAVYHNAST  362 (398)
T ss_pred             cccc-cc--ccccccchhhCceeEEEEECC--HHHHHHHH-HHhCCCCceEEEeCCHHHHHHHHHhC--CeeEEEEeCCC
Confidence            5665 23  378999999999999999998  69999999 99999999999999999999999986  99999999986


Q ss_pred             CCCCCCCccccCc------CC--CCChHHHHhhcceec
Q psy1961         100 TGSVVGQQPFGGT------ND--KAGGPHYVLRWATPQ  129 (147)
Q Consensus       100 ~~~~~~~~pfGG~------~g--~~~g~~~~~~f~~~k  129 (147)
                      ...  +..|||=+      .+  ...|+-+++.|+..|
T Consensus       363 ~~~--~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~  398 (398)
T TIGR00407       363 RFT--DGFRFGFGAEVGISTQKLHARGPMGLEALTSYK  398 (398)
T ss_pred             CcC--CCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence            533  45688752      12  234677777776643

The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.

>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating)

Probab=99.65  E-value=8.2e-16  Score=129.79  Aligned_cols=101  Identities=7%  Similarity=0.075  Sum_probs=77.3

Q ss_pred             CCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhC----CCCccEEEEEcCCHHHHHHHHhhccCceeEEEEcCCCC-
Q psy1961          26 KDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS----TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKST-  100 (147)
Q Consensus        26 v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~----~~~gL~~~vft~d~~~~~~~~~~~~~~~G~v~iN~~~~-  100 (147)
                      +.+++++ .+|.||||++|++|+|  +||||+++ |+    ++|||+++|||+|.+++.++.+.+  ++|.|+||++.. 
T Consensus       328 v~~~~~~-~~E~fgPVl~v~~~~~--~dEAI~~a-n~~i~~~~~Glta~I~T~d~~~a~~f~~~i--~ag~V~VN~~~~~  401 (488)
T TIGR02518       328 VGNKNPY-SREKLTTILAFYTEEN--WHEACELS-IELLQNEGAGHTLIIHSENKDIVREFALKK--PVSRMLVNTGGSL  401 (488)
T ss_pred             CCCCCcc-ccCccCceEEEEEeCC--HHHHHHHH-HHhhhcCCCCCeEEEEeCCHHHHHHHHHhC--CeeEEEEcCCCcc
Confidence            5777886 7999999999999998  69999998 87    699999999999999999999976  999999996432 


Q ss_pred             ---CCCCC-----CccccC-cCCCCChHHHHhhcceeceEE
Q psy1961         101 ---GSVVG-----QQPFGG-TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus       101 ---~~~~~-----~~pfGG-~~g~~~g~~~~~~f~~~k~v~  132 (147)
                         +.+..     .+.||+ ++.....+=+++.++..|.+.
T Consensus       402 ~~~Ga~t~~~~~~~~G~G~~~g~st~~~v~~~~l~~~k~v~  442 (488)
T TIGR02518       402 GGIGATTNLVPAFTLGCGAVGGSSTSDNITPENLINIRRVA  442 (488)
T ss_pred             cccccccCCCccccccccccCCCcCCCCCCHHHhheeeEEE
Confidence               12111     222555 222222355677788877775

>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

Probab=99.64  E-value=1.2e-15  Score=127.21  Aligned_cols=72  Identities=18%  Similarity=0.266  Sum_probs=65.3

Q ss_pred             EEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCC----CCccEEEEEcCCHHHHHHHHhhccCceeEEEEcCC
Q psy1961          23 VQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST----PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDK   98 (147)
Q Consensus        23 l~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~----~~gL~~~vft~d~~~~~~~~~~~~~~~G~v~iN~~   98 (147)
                      +++++++|+++ +|.||||++|++|+|  .||||+++ |++    +|||+++|||+|.+++.++++.+  ++|.|+||+.
T Consensus       316 ~~~v~~~~~~~-~E~FGPVl~v~~~~~--~~eAi~~a-N~~~~~~~~GLsa~V~T~d~~~a~~~~~~l--~aG~V~IN~~  389 (436)
T cd07122         316 ETGVGPEEPLS-REKLSPVLAFYRAED--FEEALEKA-RELLEYGGAGHTAVIHSNDEEVIEEFALRM--PVSRILVNTP  389 (436)
T ss_pred             cCCCCCCCcch-hcccCCeEEEEEeCC--HHHHHHHH-HHHHhccCCCceEEEEcCCHHHHHHHHhhC--CceEEEEeCC
Confidence            56789999988 557999999999998  69999999 997    89999999999999999999986  9999999987


Q ss_pred             CC
Q psy1961          99 ST  100 (147)
Q Consensus        99 ~~  100 (147)
                      +.
T Consensus       390 ~~  391 (436)
T cd07122         390 SS  391 (436)
T ss_pred             cc
Confidence            64

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.

>KOG2449|consensus

Probab=99.47  E-value=3.2e-14  Score=100.40  Aligned_cols=81  Identities=30%  Similarity=0.465  Sum_probs=75.2

Q ss_pred             CCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHHHhhccCceeEE
Q psy1961          14 CGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNY   93 (147)
Q Consensus        14 ~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~~~~~~~~~G~v   93 (147)
                      .|+|..||+|. |.++|.+++||+||||+.+..-++  +||+|.++ |.++||-...+||.+.+..+++.+..  ++|.+
T Consensus        63 ~~~f~~~tiLs-vtP~ms~ykeeI~gpVlv~l~~~t--ldd~I~Ii-n~nPygn~t~i~Tsn~atark~~~e~--~a~qi  136 (157)
T KOG2449|consen   63 EGNFVGPTILS-VTPNMSCYKEEIFGPVLVRLETET--LDDAIFII-NNNPYGNGTAIFTSNGATARKFCHEP--DAGQI  136 (157)
T ss_pred             cCCcccceEEE-ecCCcceeHhhhhcceEEEEeecC--CCceeEEE-ecCCCCceeEEEecCcHHhhhhhcCC--Cccce
Confidence            57899999998 999999999999999999998877  79999999 99999999999999999999999975  99999


Q ss_pred             EEcCCCC
Q psy1961          94 YINDKST  100 (147)
Q Consensus        94 ~iN~~~~  100 (147)
                      .+|....
T Consensus       137 g~~~~ip  143 (157)
T KOG2449|consen  137 GANVPIP  143 (157)
T ss_pred             ecccccc
Confidence            9997643

>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=98.27  E-value=2.5e-06  Score=70.08  Aligned_cols=99  Identities=19%  Similarity=0.249  Sum_probs=83.3

Q ss_pred             CCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHHHhhccCceeEEEEcCCCCCCCCCCcc
Q psy1961          29 LEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQP  108 (147)
Q Consensus        29 ~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~p  108 (147)
                      ...-|..|..-+++.|..+++  +|+||+++ |....+-+=+|.|+|.+.+++|.+.+  ++..|+||.++.........
T Consensus       305 ~e~Dw~tEyLd~ilavkvVd~--ld~AI~HI-n~y~S~HsdaIiTe~~~~a~~F~~~V--DSAaVyvNASTRFtDG~~fG  379 (417)
T COG0014         305 TEEDWDTEYLDLILAVKVVDS--LDEAIAHI-NTYGSGHSDAIITEDYANAERFVNEV--DSAAVYVNASTRFTDGGQFG  379 (417)
T ss_pred             chhhHHHHhhhheeEEEEeCC--HHHHHHHH-HHhCCCCCcceeeCCHHHHHHHHhhc--chheEEEecccccccCcccc
Confidence            334578888899999999998  89999999 99888899999999999999999986  99999999988655455677


Q ss_pred             ccC--cCC----CCChHHHHhhcceeceEE
Q psy1961         109 FGG--TND----KAGGPHYVLRWATPQSIK  132 (147)
Q Consensus       109 fGG--~~g----~~~g~~~~~~f~~~k~v~  132 (147)
                      ||.  |.+    ...|+=++++.|..|.+.
T Consensus       380 ~GaEiGISTqKlHARGPmGLe~LTs~Kyiv  409 (417)
T COG0014         380 LGAEIGISTQKLHARGPMGLEALTSYKYIV  409 (417)
T ss_pred             CceEEEeecCcccCCCCCChhhhcceeEEE
Confidence            777  322    345888999999998875

>KOG4165|consensus

Probab=96.12  E-value=0.017  Score=46.92  Aligned_cols=101  Identities=17%  Similarity=0.126  Sum_probs=73.6

Q ss_pred             CCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHHHhhccCceeEEEEcCCCCCCCCCC
Q psy1961          27 DPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQ  106 (147)
Q Consensus        27 ~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~~~~~~~~~G~v~iN~~~~~~~~~~  106 (147)
                      ++..+-++.|.-.-.+.|-.+++  +++||+.+ +....+-+-+|.|+|.+.++++++.+  ++.-|++|.++.....-.
T Consensus       297 p~e~~s~~~Ey~~l~~~ievV~~--v~~Ai~HI-~~hgS~HTD~IvTe~~~~Ae~Fl~~V--DSa~vf~NASTRFaDGfR  371 (433)
T KOG4165|consen  297 PPEAKSFNTEYGSLECTIEVVDS--VQSAIDHI-HTHGSSHTDCIVTENEATAEHFLKHV--DSACVFHNASTRFADGFR  371 (433)
T ss_pred             Cchhhhhhhhhcchheeeeeccc--HHHHHHHH-HhcCCcccceEEecCHHHHHHHHhcc--chhheeeccccccccccc
Confidence            44556677886667788888887  79999999 99888899999999999999999986  999999999875432223


Q ss_pred             ccccC--cC--CC--CChHHHHhhcceeceEE
Q psy1961         107 QPFGG--TN--DK--AGGPHYVLRWATPQSIK  132 (147)
Q Consensus       107 ~pfGG--~~--g~--~~g~~~~~~f~~~k~v~  132 (147)
                      ..+|.  |.  ++  ..|+-+++-....|++.
T Consensus       372 fGlGaEVGIST~rIHARGPvGveGLlttkw~l  403 (433)
T KOG4165|consen  372 FGLGAEVGISTSRIHARGPVGVEGLLTTKWLL  403 (433)
T ss_pred             ccccceeeeeccceeccCCccccceeeeeeEE
Confidence            44444  32  22  23555555555556643

>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster

Probab=93.50  E-value=0.36  Score=37.00  Aligned_cols=74  Identities=14%  Similarity=0.218  Sum_probs=56.4

Q ss_pred             ecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhC--CCCccEEEEEcCCHHHHHHHHhhccCceeEEEEc
Q psy1961          19 QPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS--TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYIN   96 (147)
Q Consensus        19 ~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~--~~~gL~~~vft~d~~~~~~~~~~~~~~~G~v~iN   96 (147)
                      .|.|+.+++.+-  +- .-=.+|+++-.|++  ..||++++ +.  .+|+ +.++|++..+.+-.++..+  .+-.++||
T Consensus        97 SPilV~d~~h~~--fg-~~PTgViTlhtFRt--~~Ea~~l~-~kE~l~f~-SVsiW~ekla~~Yel~~~l--~~~~f~iN  167 (215)
T PF07368_consen   97 SPILVCDFTHSY--FG-DGPTGVITLHTFRT--PKEAIELC-AKETLPFD-SVSIWNEKLASAYELAARL--PCDTFYIN  167 (215)
T ss_pred             CCEEEcCCCHHH--cC-CCCCeEEEEEccCC--HHHHHHHH-hcCCCCcc-eEEEeCcHHHHHHHHHHhC--CCCEEEEE
Confidence            588887665531  21 22237899999998  69999999 54  2444 9999999988888888875  89999999


Q ss_pred             CCCCC
Q psy1961          97 DKSTG  101 (147)
Q Consensus        97 ~~~~~  101 (147)
                      |....
T Consensus       168 C~~V~  172 (215)
T PF07368_consen  168 CFNVD  172 (215)
T ss_pred             eccCC
Confidence            98653

The function of this family is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	147
3v9j_A	563	Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat		2e-50
3v9g_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		2e-48
3v9h_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		2e-48
3v9i_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		2e-48
3rjl_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		2e-20
3qan_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		9e-20
4f9i_A	1026	Crystal Structure Of Proline Utilization A (Puta) F		2e-17
1uzb_A	516	1-pyrroline-5-carboxylate Dehydrogenase Length = 51		3e-17
2bhp_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		3e-17
2bja_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		3e-17
3haz_A	1001	Crystal Structure Of Bifunctional Proline Utilizati		2e-16
3ed6_A	520	1.7 Angstrom Resolution Crystal Structure Of Betain		1e-07
1ad3_A	452	Class 3 Aldehyde Dehydrogenase Complex With Nicotin		1e-07
3ty7_A	478	Crystal Structure Of Aldehyde Dehydrogenase Family		3e-07
3r31_A	517	Crystal Structure Of Betaine Aldehyde Dehydrogenase		4e-07
2d4e_A	515	Crystal Structure Of The Hpcc From Thermus Thermoph		6e-07
3rhl_A	517	Crystal Structure Of The E673aC707A DOUBLE MUTANT O		9e-07
4gnz_A	517	Crystal Structure Of The C707s Mutant Of C-terminal		9e-07
3rhr_A	517	Crystal Structure Of The C707a Mutant Of The C-Term		9e-07
2o2p_A	517	Crystal Structure Of The C-Terminal Domain Of Rat 1		1e-06
3rhm_A	517	Crystal Structure Of The E673q Mutant Of C-Terminal		1e-06
3rhj_A	517	Crystal Structure Of The E673a Mutant Of The C-Term		1e-06
1bxs_A	501	Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad		1e-06
4dal_A	498	Crystal Structure Of Putative Aldehyde Dehydrogenas		1e-06
3i44_A	497	Crystal Structure Of Aldehyde Dehydrogenase From Ba		1e-06
4a0m_A	496	Crystal Structure Of Betaine Aldehyde Dehydrogenase		1e-06
1o9j_A	501	The X-Ray Crystal Structure Of Eta-Crystallin Lengt		2e-06
2opx_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		2e-06
1zum_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		3e-06
3inl_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		3e-06
1nzw_A	500	Cys302ser Mutant Of Human Mitochondrial Aldehyde De		3e-06
3n80_A	500	Human Mitochondrial Aldehyde Dehydrogenase, Apo For		3e-06
1o05_A	500	Apo Form Of Human Mitochondrial Aldehyde Dehydrogen		3e-06
4fr8_A	500	Crystal Structure Of Human Aldehyde Dehydrogenase-2		3e-06
3n81_A	500	T244a Mutant Of Human Mitochondrial Aldehyde Dehydr		3e-06
2onn_A	500	Arg475gln Mutant Of Human Mitochondrial Aldehyde De		3e-06
2imp_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		3e-06
2hg2_A	479	Structure Of Lactaldehyde Dehydrogenase Length = 47		3e-06
1cw3_A	494	Human Mitochondrial Aldehyde Dehydrogenase Complexe		3e-06
1bi9_A	499	Retinal Dehydrogenase Type Two With Nad Bound Lengt		3e-06
4i8p_A	520	Crystal Structure Of Aminoaldehyde Dehydrogenase 1a		5e-06
1a4s_A	503	Betaine Aldehyde Dehydrogenase From Cod Liver Lengt		6e-06
3sza_A	469	Crystal Structure Of Human Aldh3a1 - Apo Form Lengt		7e-06
4i9b_A	517	Structure Of Aminoaldehyde Dehydrogenase 1 From Sol		1e-05
1ag8_A	499	Aldehyde Dehydrogenase From Bovine Mitochondria Len		1e-05
2xdr_A	489	Crystallographic Structure Of Betaine Aldehyde Dehy		1e-05
2wme_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		1e-05
2wox_A	489	Betaine Aldehyde Dehydrogenase From Pseudomonas Aer		1e-05
4i8q_A	514	Structure Of The Aminoaldehyde Dehydrogenase 1 E260		1e-05
3zqa_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		1e-05
2wme_C	490	Crystallographic Structure Of Betaine Aldehyde Dehy		1e-05
4h7n_A	474	The Structure Of Putative Aldehyde Dehydrogenase Pu		1e-05
3b4w_A	495	Crystal Structure Of Mycobacterium Tuberculosis Ald		2e-05
3iwk_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 1		2e-05
3iwj_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 2		3e-05
3jz4_C	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		6e-05
3jz4_A	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		6e-05
1wnb_A	495	Escherichia Coli Ydcw Gene Product Is A Medium-Chai		3e-04
3ros_A	484	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		4e-04
3u4j_A	528	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		8e-04

>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563

Iteration: 1
 Score =  193 bits (491), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 90/148 (60%), Positives = 113/148 (76%), Gaps = 5/148 (3%)
Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           I+ GGQ +ES GY+++P I+++KDP E IM EEIFGPVLT++VYPD    +TLK+V  +T
Sbjct: 415 ILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTT 474
Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGG 118
            Y LTGAVFA+D++  +     L+ AAGN+YINDKSTGSVVGQQPFG     GTNDK GG
Sbjct: 475 SYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGG 534
Query: 119 PHYVLRWATPQSIKETFVPLTEWKYPYM 146
           PHY+LRW +PQ IKET  PL +W+Y YM
Sbjct: 535 PHYILRWTSPQVIKETHKPLGDWRYSYM 562

>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566

Iteration: 1
 Score =  187 bits (476), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 87/148 (58%), Positives = 111/148 (75%), Gaps = 5/148 (3%)
Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           I+ GG+ D+S GYF++P IV++KDP E IM EEIFGPVL+++VYPD    +TL++V  +T
Sbjct: 418 ILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTT 477
Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGG 118
            Y LTGAVF++D+   +     L+ AAGN+YINDKSTGS+VGQQPFG     GTNDK GG
Sbjct: 478 SYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPGG 537
Query: 119 PHYVLRWATPQSIKETFVPLTEWKYPYM 146
           PHY+LRW +PQ IKET  PL +W Y YM
Sbjct: 538 PHYILRWTSPQVIKETHKPLGDWSYAYM 565

>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566

Iteration: 1
 Score =  187 bits (476), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 87/148 (58%), Positives = 111/148 (75%), Gaps = 5/148 (3%)
Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           I+ GG+ D+S GYF++P IV++KDP E IM EEIFGPVL+++VYPD    +TL++V  +T
Sbjct: 418 ILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTT 477
Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGG 118
            Y LTGAVF++D+   +     L+ AAGN+YINDKSTGS+VGQQPFG     GTNDK GG
Sbjct: 478 SYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPGG 537
Query: 119 PHYVLRWATPQSIKETFVPLTEWKYPYM 146
           PHY+LRW +PQ IKET  PL +W Y YM
Sbjct: 538 PHYILRWTSPQVIKETHKPLGDWSYAYM 565

>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566

Iteration: 1
 Score =  187 bits (475), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 87/148 (58%), Positives = 111/148 (75%), Gaps = 5/148 (3%)
Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           I+ GG+ D+S GYF++P IV++KDP E IM EEIFGPVL+++VYPD    +TL++V  +T
Sbjct: 418 ILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKETLQLVDSTT 477
Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGG 118
            Y LTGAVF++D+   +     L+ AAGN+YINDKSTGS+VGQQPFG     GTNDK GG
Sbjct: 478 SYGLTGAVFSQDKDVVQEATKVLRNAAGNFYINDKSTGSIVGQQPFGGARASGTNDKPGG 537
Query: 119 PHYVLRWATPQSIKETFVPLTEWKYPYM 146
           PHY+LRW +PQ IKET  PL +W Y YM
Sbjct: 538 PHYILRWTSPQVIKETHKPLGDWSYAYM 565

>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 10/137 (7%)
Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           ++ GG+ D+S GYFI+PTI    DP  ++M EEIFGPV+          D+ L+ V ++T
Sbjct: 385 LVSGGKGDDSKGYFIEPTIFADLDPKARLMQEEIFGPVVAF--SKVSSFDEALE-VANNT 441
Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGG 118
            Y LTGAV  ++     R   +  +  GN Y N   TG++VG  PFG     GT+ KAGG
Sbjct: 442 EYGLTGAVITKNRDHINRAKQE--FHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGG 499
Query: 119 PHYVLRWATPQSIKETF 135
           P Y+      ++I E F
Sbjct: 500 PDYLALHMQAKTISEMF 516

>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538

Iteration: 1
 Score = 92.0 bits (227), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 53/137 (38%), Positives = 76/137 (55%), Gaps = 10/137 (7%)
Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           ++ GG+ D S G+FIQPTI+   DP   IM EEIFGPV+        D D  L+I  ++T
Sbjct: 385 LMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAF--SKANDFDHALEI-ANNT 441
Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGG 118
            Y LTGAV   + +  ++     ++  GN Y N   TG++VG  PFG     GT+ KAGG
Sbjct: 442 EYGLTGAVITRNRAHIEQA--KREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGG 499
Query: 119 PHYVLRWATPQSIKETF 135
           P Y+      +++ E +
Sbjct: 500 PDYLALHMQAKTVSEMY 516

>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 15/136 (11%)
Query: 15   GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
            GYF+  TI+    P  +I  EEIFGPVL   V   KD D+ ++   +ST +ALTG +F+ 
Sbjct: 890  GYFVPMTIIGGIKPEHRIAQEEIFGPVLA--VMRAKDFDQAIEW-ANSTQFALTGGIFSR 946
Query: 75   DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGGPHYVLRWATPQ 129
                  +   + +   GN YIN  +TG++V +QPFG     G   KAGGP Y+L +  P+
Sbjct: 947  SPEHLAKARREFR--VGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPR 1004
Query: 130  SIKET-----FVPLTE 140
             + E      F P+ E
Sbjct: 1005 VVTENTMRRGFAPIEE 1020

>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 16/141 (11%)
Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           +++ GG+  E  GYFI PT+     P  +I  EEIFGPVL++     KD  + L++  D 
Sbjct: 384 QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRV--KDFAEALEVAND- 440
Query: 63  TPYALTGAVFA---EDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTND 114
           TPY LTG V++   E   + +R     ++  GN Y N K TG++VG QPFG     GTN 
Sbjct: 441 TPYGLTGGVYSRKREHLEWARR-----EFHVGNLYFNRKITGALVGVQPFGGFKLSGTNA 495
Query: 115 KAGGPHYVLRWATPQSIKETF 135
           K G   Y+  +   +++ E F
Sbjct: 496 KTGALDYLRLFLEMKAVAERF 516

>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 16/141 (11%)
Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           +++ GG+  E  GYFI PT+     P  +I  EEIFGPVL++     KD  + L++  D 
Sbjct: 384 QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRV--KDFAEALEVAND- 440
Query: 63  TPYALTGAVFA---EDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTND 114
           TPY LTG V++   E   + +R     ++  GN Y N K TG++VG QPFG     GTN 
Sbjct: 441 TPYGLTGGVYSRKREHLEWARR-----EFHVGNLYFNRKITGALVGVQPFGGFKLSGTNA 495
Query: 115 KAGGPHYVLRWATPQSIKETF 135
           K G   Y+  +   +++ E F
Sbjct: 496 KTGALDYLRLFLEMKAVAERF 516

>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 16/141 (11%)
Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           +++ GG+  E  GYFI PT+     P  +I  EEIFGPVL++     KD  + L++  D 
Sbjct: 384 QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRV--KDFAEALEVAND- 440
Query: 63  TPYALTGAVFA---EDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTND 114
           TPY LTG V++   E   + +R     ++  GN Y N K TG++VG QPFG     GTN 
Sbjct: 441 TPYGLTGGVYSRKREHLEWARR-----EFHVGNLYFNRKITGALVGVQPFGGFKLSGTNA 495
Query: 115 KAGGPHYVLRWATPQSIKETF 135
           K G   Y+  +   +++ E F
Sbjct: 496 KTGALDYLRLFLEMKAVAERF 516

>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 10/122 (8%)
Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G F+ P I +  +  +  +TEE+FGP+L +  Y  ++L++ L+ + + T Y LT  V + 
Sbjct: 867 GCFVAPHIFELTEAGQ--LTEEVFGPILHVVRYRPENLERVLRAI-ERTGYGLTLGVHSR 923
Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG-----GTNDKAGGPHYVLRWATPQ 129
            +   +  +D ++   GN Y+N    G+VVG QPFG     GT  KAGGPHY+ R+AT Q
Sbjct: 924 IDDSIEAIIDRVQ--VGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQ 981
Query: 130 SI 131
           ++
Sbjct: 982 TV 983

>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G F +PT++   D   +I+ EE+FGPV+T+  +  +   + +++  DS  Y L GAVF++
Sbjct: 393 GLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETE--QEAIQLANDSI-YGLAGAVFSK 449
Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           D    +R  + LK   G  +IND        Q P+GG
Sbjct: 450 DIGKAQRVANKLKL--GTVWINDFH--PYFAQAPWGG 482

>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           ++  GG +D+S  Y I PTI+   DP   +M EEIFGPV+ I     + L++ ++ +   
Sbjct: 301 KVAHGGTWDQSSRY-IAPTILVDVDPQSPVMQEEIFGPVMPIVCV--RSLEEAIQFINQR 357
Query: 63  -TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHY 121
             P AL   VF+ +E   K+ + +   ++G    ND      V   PFGG  +   G ++
Sbjct: 358 EKPLALY--VFSNNEKVIKKMIAET--SSGGVTANDVIVHITVPTLPFGGVGNSGMGAYH 413

>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           GYF +PTI    D    I  EEIFGPV ++  Y   DLD+ ++I  D T Y L G V  +
Sbjct: 361 GYFARPTIFINVDNQXTIAQEEIFGPVXSVITY--NDLDEAIQIAND-TKYGLAGYVIGK 417
Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           D+    +    ++  AG   IN+      +   PFGG
Sbjct: 418 DKETLHKVARSIE--AGTVEINEAGRKPDL---PFGG 449

>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 24/152 (15%)
Query: 4   IIGGGQYDESCG--YFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           I GGG  +   G   ++QPT+         I  EEIFGPV+ +  + D+D    +    +
Sbjct: 358 ITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDED---EVLARAN 414
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGT--------N 113
           +T + L G VF  D +   R +D L+  AG  +IN  +   V  + PFGG+        N
Sbjct: 415 ATEFGLAGGVFTADLARAHRVVDGLE--AGTLWINTYNLCPV--EIPFGGSKQSGFGREN 470
Query: 114 DKAGGPHYVLRWATPQSIKETFVPLTEWKYPY 145
             A   HY         +K  +V   +   PY
Sbjct: 471 SAAALEHY-------SELKTVYVSTGKVDAPY 495

>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 46/140 (32%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 11  DESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGA 70
           D S G ++ PT+   ++ + KI  EEIFGPVL     P KD ++ L+   D T Y L   
Sbjct: 385 DLSRGNYLLPTVFVGENHM-KIAQEEIFGPVLVAI--PFKDEEEALRKAND-TKYGLAAY 440
Query: 71  VFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG---GTNDKAGGPHYVLRWAT 127
           VF  D     R    L+  AG  Y+N  +   +    PFG   G+ D+  G  Y L + T
Sbjct: 441 VFTRDLERAHRLA--LELEAGMVYLNSHNVRHL--PTPFGGVKGSGDRREGGTYALDFYT 496
Query: 128 PQSIKETFVPLTEWKYPYMG 147
              +K   +PL     P  G
Sbjct: 497 --DLKTIALPLRPPHVPKFG 514

>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           + ++ GG      G+F QPT+    +    I  EE FGP++ I  + D D+D  L    +
Sbjct: 385 ATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLS-RAN 443
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           +T + L   VF  D    K      K  AG  +IN  +   V    PFGG
Sbjct: 444 ATEFGLASGVFTRD--INKALYVSDKLQAGTVFINTYNKTDVAA--PFGG 489

>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           + ++ GG      G+F QPT+    +    I  EE FGP++ I  + D D+D  L    +
Sbjct: 385 ATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLS-RAN 443
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           +T + L   VF  D    K      K  AG  +IN  +   V    PFGG
Sbjct: 444 ATEFGLASGVFTRD--INKALYVSDKLQAGTVFINTYNKTDVAA--PFGG 489

>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           + ++ GG      G+F QPT+    +    I  EE FGP++ I  + D D+D  L    +
Sbjct: 385 ATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLS-RAN 443
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           +T + L   VF  D    K      K  AG  +IN  +   V    PFGG
Sbjct: 444 ATEFGLASGVFTRD--INKALYVSDKLQAGTVFINTYNKTDVAA--PFGG 489

>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           + ++ GG      G+F QPT+    +    I  EE FGP++ I  + D D+D  L    +
Sbjct: 385 ATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLS-RAN 443
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           +T + L   VF  D    K      K  AG  +IN  +   V    PFGG
Sbjct: 444 ATEFGLASGVFTRD--INKALYVSDKLQAGTVFINTYNKTDVAA--PFGG 489

>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           + ++ GG      G+F QPT+    +    I  EE FGP++ I  + D D+D  L    +
Sbjct: 385 ATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLS-RAN 443
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           +T + L   VF  D    K      K  AG  +IN  +   V    PFGG
Sbjct: 444 ATEFGLASGVFTRD--INKALYVSDKLQAGTVFINTYNKTDVAA--PFGG 489

>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           + ++ GG      G+F QPT+    +    I  EE FGP++ I  + D D+D  L    +
Sbjct: 385 ATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLS-RAN 443
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           +T + L   VF  D    K      K  AG  +IN  +   V    PFGG
Sbjct: 444 ATEFGLASGVFTRD--INKALYVSDKLQAGTVFINTYNKTDVAA--PFGG 489

>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 6   GGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPY 65
           GGG +    GYFIQPT+        +I  EEIFGPV  I  +  K LD  +K   ++T Y
Sbjct: 371 GGGPWGNK-GYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKF--KSLDDVIK-RANNTFY 426
Query: 66  ALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
            L+  +F  D    K         +G  ++N  S   V  Q PFGG
Sbjct: 427 GLSAGIFTND--IDKAITVSSALQSGTVWVNCYSV--VSAQCPFGG 468

>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           EI  GG+     G+F QPT+V      ++I+  E+FGPV+++  +  K  D  +    DS
Sbjct: 368 EITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGK--DDAVAWANDS 425
Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
             Y L  +V+ +D S   R    L+Y  G  +IN  +   +  + P GG      G
Sbjct: 426 D-YGLASSVWTKDISKAXRAASRLQY--GCTWIN--THFXLTNEXPHGGIKQSGYG 476

>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           GY+++PT+     P  +I  EEIFGPVL++  +  +D   TL    + T Y LT  + ++
Sbjct: 382 GYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTL---ANDTEYGLTNYIQSQ 438
Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAG 117
           D S  +R    ++        ++   GS  G   F G   + G
Sbjct: 439 DRSKCRRIAAQVRSGMVEVNGHELPGGSYFGGVKFSGRAREGG 481

>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 4   IIGGGQYDESC--GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           I+ GG   E    GY+I+PTIV       +I  EE+FGPVL +  +  +  D+ + +  D
Sbjct: 356 ILYGGSRPEHLKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTFSSE--DEAIALAND 413
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
            T Y L  AVF+ D    +R    L+   G  ++N      V  Q P+GG      G
Sbjct: 414 -TEYGLAAAVFSNDLERCERITKALE--VGAVWVNCSQPCFV--QAPWGGIKRSGFG 465

>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 6   GGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPY 65
           GGG +    GYFIQPT+        +I  EEIFGPV  I  +  K LD+ +K   ++T Y
Sbjct: 371 GGGPWGNK-GYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKF--KSLDEVIK-RANNTYY 426
Query: 66  ALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
            L   VF +D    K         AG  ++N     S   Q P GG
Sbjct: 427 GLVAGVFTKD--LDKAVTVSSALQAGTVWVNCYLAAS--AQSPAGG 468

>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 7   GGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYA 66
           GG+  E  GY+  PT++        IM EE FGPVL +  +    L++ + +  DS  Y 
Sbjct: 354 GGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAF--DTLEEAISMANDSD-YG 410
Query: 67  LTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVG------QQPFGGTNDKAGGPH 120
           LT +++ ++ +   + +  LK+  G  YIN ++  ++ G      +   GG + K G   
Sbjct: 411 LTSSIYTQNLNVAMKAIKGLKF--GETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHE 468
Query: 121 YV 122
           Y+
Sbjct: 469 YL 470

>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           ++++ GG      GYFIQPT+         I  EEIFGPV+ I  +  K +++ +    +
Sbjct: 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN 422
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
           ST Y L  AVF +D       LD   Y      AG  ++N      V G Q PFGG
Sbjct: 423 ST-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 467

>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           ++++ GG      GYFIQPT+         I  EEIFGPV+ I  +  K +++ +    +
Sbjct: 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN 422
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
           ST Y L  AVF +D       LD   Y      AG  ++N      V G Q PFGG
Sbjct: 423 ST-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 467

>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           ++++ GG      GYFIQPT+         I  EEIFGPV+ I  +  K +++ +    +
Sbjct: 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN 422
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
           ST Y L  AVF +D       LD   Y      AG  ++N      V G Q PFGG
Sbjct: 423 ST-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 467

>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           ++++ GG      GYFIQPT+         I  EEIFGPV+ I  +  K +++ +    +
Sbjct: 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN 422
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
           ST Y L  AVF +D       LD   Y      AG  ++N      V G Q PFGG
Sbjct: 423 ST-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 467

>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           ++++ GG      GYFIQPT+         I  EEIFGPV+ I  +  K +++ +    +
Sbjct: 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN 422
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
           ST Y L  AVF +D       LD   Y      AG  ++N      V G Q PFGG
Sbjct: 423 ST-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 467

>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           ++++ GG      GYFIQPT+         I  EEIFGPV+ I  +  K +++ +    +
Sbjct: 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN 422
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
           ST Y L  AVF +D       LD   Y      AG  ++N      V G Q PFGG
Sbjct: 423 ST-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 467

>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           ++++ GG      GYFIQPT+         I  EEIFGPV+ I  +  K +++ +    +
Sbjct: 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN 422
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
           ST Y L  AVF +D       LD   Y      AG  ++N      V G Q PFGG
Sbjct: 423 ST-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 467

>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           ++++ GG      GYFIQPT+         I  EEIFGPV+ I  +  K +++ +    +
Sbjct: 365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN 422
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
           ST Y L  AVF +D       LD   Y      AG  ++N      V G Q PFGG
Sbjct: 423 ST-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 467

>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 7   GGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYA 66
           GG+  E  GY+  PT++        IM EE FGPVL +  +    L+  + +  DS  Y 
Sbjct: 354 GGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAF--DTLEDAISMANDSD-YG 410
Query: 67  LTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVG------QQPFGGTNDKAGGPH 120
           LT +++ ++ +   + +  LK+  G  YIN ++  ++ G      +   GG + K G   
Sbjct: 411 LTSSIYTQNLNVAMKAIKGLKF--GETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHE 468
Query: 121 YV 122
           Y+
Sbjct: 469 YL 470

>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 7   GGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYA 66
           GG+  E  GY+  PT++        IM EE FGPVL +  +    L+  + +  DS  Y 
Sbjct: 354 GGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAF--DTLEDAISMANDSD-YG 410
Query: 67  LTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVG------QQPFGGTNDKAGGPH 120
           LT +++ ++ +   + +  LK+  G  YIN ++  ++ G      +   GG + K G   
Sbjct: 411 LTSSIYTQNLNVAMKAIKGLKF--GETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHE 468
Query: 121 YV 122
           Y+
Sbjct: 469 YL 470

>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           ++++ GG      GYFIQPT+         I  EEIFGPV+ I  +  K +++ +    +
Sbjct: 359 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN 416
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
           ST Y L  AVF +D       LD   Y      AG  ++N      V G Q PFGG
Sbjct: 417 ST-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 461

>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 7   GGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYA 66
           GG+     G+FI+PT+        +I  EEIFGPV  I  +  K +D+ ++   +S  + 
Sbjct: 369 GGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRF--KTMDEVIERANNSD-FG 425
Query: 67  LTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           L  AVF  D    K  +      AG  +IN     ++  Q PFGG
Sbjct: 426 LVAAVFTND--INKALMVSSAMQAGTVWIN--CYNALNAQSPFGG 466

>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G+FI+PTI+       +I  EE+FGPVL +  +  +  D+ +++  D T Y L GAV + 
Sbjct: 389 GFFIEPTIITDITTSMEIWREEVFGPVLCVKEFSTE--DEAIELAND-TQYGLAGAVISG 445
Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAG 117
           D    +R  +++   AG  ++N   +     Q P+GG N ++G
Sbjct: 446 DRERCQRLSEEID--AGCIWVN--CSQPCFCQAPWGG-NKRSG 483

>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           GYF+ P ++         + EEIFGPV+++  +   D ++ +    ++T + L   VF  
Sbjct: 379 GYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPF---DTEEEVLQRANNTTFGLASGVFTR 435
Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           D S   R   +L+  AG  YIN  S   V  + PFGG
Sbjct: 436 DISRAHRVAANLE--AGTCYINTYSISPV--EVPFGG 468

>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 7   GGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS-TPY 65
           GG  D +  Y I PTI+   DP   +M EEIFGPVL I     + L++ ++ +     P 
Sbjct: 322 GGTGDAATRY-IAPTILTDVDPQSPVMQEEIFGPVLPIVCV--RSLEEAIQFINQREKPL 378
Query: 66  ALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHY 121
           AL   +F+ ++   K+ + +   ++G    ND      +   PFGG  +   G ++
Sbjct: 379 ALY--MFSSNDKVIKKMIAET--SSGGVAANDVIVHITLHSLPFGGVGNSGMGSYH 430

>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 4   IIGGGQYDESC--GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           I+ GG+  +    GY++QPTI+   +   +I  EE+FGPVL +  +  K  ++ +++  D
Sbjct: 373 ILCGGERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTF--KTEEQAIELAND 430
Query: 62  STPYALTGAVFAEDESFQKRCLDDLK-YAAGNYYINDKSTGSVVGQQPFGG 111
            T Y L  AV ++D    KRC    K +  G  +IN   +     + P+GG
Sbjct: 431 -TKYGLGAAVMSKD---VKRCERFTKAFQTGIIWIN--CSQPTFNELPWGG 475

>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           +++ GG      GYFIQPT+         I  EEIFGPV+ I  +  K +++ +    +S
Sbjct: 365 KLLCGGGAAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKF--KSMEEVVGRANNS 422
Query: 63  TPYALTGAVFAEDESFQKRCLDDLKY-----AAGNYYINDKSTGSVVG-QQPFGG 111
             Y L  AVF +D       LD   Y      AG  ++N      V G Q PFGG
Sbjct: 423 K-YGLAAAVFTKD-------LDKANYLSQALQAGTVWVN---CYDVFGAQSPFGG 466

>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G ++ PT+         I+ EEIFGPV++I VY D+  D+ ++   D T Y L   V  +
Sbjct: 365 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE--DEAIRRAND-TEYGLAAGVVTQ 421
Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
           D +   R +  L+  AG  +IN  + G    + P GG      G
Sbjct: 422 DLARAHRAIHRLE--AGICWIN--TWGESPAEMPVGGYKQSGVG 461

>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G ++ PT+         I+ EEIFGPV++I VY D+  D+ ++   D T Y L   V  +
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE--DEAIRRAND-TEYGLAAGVVTQ 422
Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
           D +   R +  L+  AG  +IN  + G    + P GG      G
Sbjct: 423 DLARAHRAIHRLE--AGICWIN--TWGESPAEMPVGGYKQSGVG 462

>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G ++ PT+         I+ EEIFGPV++I VY D+  D+ ++   D T Y L   V  +
Sbjct: 365 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE--DEAIRRAND-TEYGLAAGVVTQ 421
Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
           D +   R +  L+  AG  +IN  + G    + P GG      G
Sbjct: 422 DLARAHRAIHRLE--AGICWIN--TWGESPAEMPVGGYKQSGVG 461

>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 4   IIGGGQYDESC--GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           I+ GG+  +    GY++QPTI+   +   +I  EE+FGPVL +  +  K  ++ +++  D
Sbjct: 373 ILCGGERPQHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTF--KTEEQAIELAND 430
Query: 62  STPYALTGAVFAEDESFQKRCLDDLK-YAAGNYYINDKSTGSVVGQQPFGG 111
            T Y L  AV ++D    KRC    K +  G  +IN   +     + P+GG
Sbjct: 431 -TKYGLGAAVMSKD---VKRCERFTKAFQTGIIWIN--CSQPTFNELPWGG 475

>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G ++ PT+         I+ EEIFGPV++I VY D+  D+ ++   D T Y L   V  +
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE--DEAIRRAND-TEYGLAAGVVTQ 422
Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
           D +   R +  L+  AG  +IN  + G    + P GG      G
Sbjct: 423 DLARAHRAIHRLE--AGICWIN--TWGESPAEMPVGGYKQSGVG 462

>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G ++ PT+         I+ EEIFGPV++I VY D+  D+ ++   D T Y L   V  +
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDE--DEAIRRAND-TEYGLAAGVVTQ 422
Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
           D +   R +  L+  AG  +IN  + G    + P GG      G
Sbjct: 423 DLARAHRAIHRLE--AGICWIN--TWGESPAEMPVGGYKQSGVG 462

>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 12/97 (12%)
Query: 7   GGQYDE-SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPY 65
           GG+ +E   G++ +PT+    +   K+ TEE FGP+  +  +P  D+++ + +  D T Y
Sbjct: 334 GGKVEELGGGWWCRPTVXTNVNHSXKVXTEETFGPIXPVXPFP--DVEEAVYLAND-TIY 390
Query: 66  ALTGAVFA--EDESFQ-KRCLDDLKYAAGNYYINDKS 99
            L+ AVFA  EDE+ +  R L+     AG   IND +
Sbjct: 391 GLSAAVFAGSEDEALKVARQLN-----AGAISINDAA 422

>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 2   SEIIGGGQYDESC--GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIV 59
           + ++ GG   E    G+FIQPT+    D    I  EEIFGPVL I  Y D + D  + I 
Sbjct: 351 ARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPY-DTEED-AIAIA 408
Query: 60  TDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYIN 96
            DS  Y L G+V+  D     +    ++   G Y IN
Sbjct: 409 NDSV-YGLAGSVWTTDVPKGIKISQQIR--TGTYGIN 442

>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 2   SEIIGGGQYDESC--GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIV 59
           + I+ GG+  E    GYF++PTI+       +I  EE+FGPVL +  +  +  ++ + + 
Sbjct: 357 ATILTGGRRPEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTE--EEAINLA 414
Query: 60  TDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
            D T Y L  AV + D    +R    L+  AG  +IN      +  Q P+GG
Sbjct: 415 ND-THYGLGSAVMSNDLERCERLSKALQ--AGIVWINCAQPSFI--QAPWGG 461

>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 2   SEIIGGGQYDESC--GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIV 59
           + I+ GG   E    G+FI+PTI+       +I  EE+FGPVL +  +  +  ++ + + 
Sbjct: 357 ATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTE--EEAIDLA 414
Query: 60  TDSTPYALTGAVFAEDESFQKRCLDDLK-YAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
            D T Y L  AV + D    +RC    K + AG  ++N   +     Q P+GG      G
Sbjct: 415 ND-TVYGLGAAVISND---LERCERVTKAFKAGIVWVN--CSQPCFTQAPWGGVKRSGFG 468

>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           + ++ GG+  E  G F QPTI+       K+  EE FGP+  +F + D   +  +    +
Sbjct: 351 ARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKD---EADVIAQAN 407
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQ-QPFGGTNDKAGG 118
            T + L    +A D S   R  + L+Y      I   +TG +  +  PFGG   KA G
Sbjct: 408 DTEFGLAAYFYARDLSRVFRVGEALEYG-----IVGINTGIISNEVAPFGGI--KASG 458

>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           + ++ GG+  E  G F QPTI+       K+  EE FGP+  +F + D   +  +    +
Sbjct: 351 ARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKD---EADVIAQAN 407
Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQ-QPFGGTNDKAGG 118
            T + L    +A D S   R  + L+Y      I   +TG +  +  PFGG   KA G
Sbjct: 408 DTEFGLAAYFYARDLSRVFRVGEALEYG-----IVGINTGIISNEVAPFGGI--KASG 458

>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           ++I GG+  +  GY+  PT++      + I+ +E+FGPV++  V P  + ++ +    DS
Sbjct: 366 KVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVS--VTPFDNEEQVVNWANDS 423
Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
             Y L  +V+ +D     R    L+Y  G  ++N      +V + P GG
Sbjct: 424 Q-YGLASSVWTKDVGRAHRVSARLQY--GCTWVNTHFM--LVSEMPHGG 467

>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 9   QYDE--SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYA 66
           QY E  S G F +PTI+        +  +E+FGP+  +FV  D   +  +++  DS+ Y 
Sbjct: 333 QYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDD--NAAIQLANDSS-YG 389
Query: 67  LTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
           L  +V   D    K+    ++   G   IN +   S  G+ PFGG      G
Sbjct: 390 LGSSVIGSDIDRAKKVSAQIE--TGXTVINGRWITS--GELPFGGIKKSGYG 437

>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           ++GG +     G +  PT+     P   I  EEIFGPVL+   +   D    L    ++T
Sbjct: 370 LLGGERIGREAGLYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTADEAVAL---ANAT 426
Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
            + L+ +V++ +     + +  ++  AG  +IN    G+   + P GG
Sbjct: 427 EFGLSASVWSTNLETALQTIRRIR--AGRCWINSVIDGT--PELPIGG 470

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	147
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	3e-84
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	4e-50
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	2e-37
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	6e-36
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	8e-35
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	1e-16
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	1e-15
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	1e-15
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	2e-15
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	2e-15
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	2e-15
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	4e-15
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	6e-15
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	7e-15
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	9e-15
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	1e-14
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	2e-14
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	2e-14
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	2e-14
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	3e-14
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	3e-14
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	4e-14
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	6e-14
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	6e-14
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	7e-14
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	1e-13
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	1e-13
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	2e-13
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	3e-13
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	4e-13
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	4e-13
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	1e-12
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	2e-12
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	3e-12
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	6e-11
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	1e-10
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	4e-09
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	7e-09
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	9e-09
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	9e-09
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	1e-08
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	5e-07
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	1e-06
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	1e-06
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	3e-06
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	5e-04

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score =  256 bits (655), Expect = 3e-84
 Identities = 90/149 (60%), Positives = 113/149 (75%), Gaps = 5/149 (3%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            I+ GGQ +ES GY+++P I+++KDP E IM EEIFGPVLT++VYPD    +TLK+V  +
Sbjct: 414 SILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDST 473

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKAG 117
           T Y LTGAVFA+D++  +     L+ AAGN+YINDKSTGSVVGQQPFGG     TNDK G
Sbjct: 474 TSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPG 533

Query: 118 GPHYVLRWATPQSIKETFVPLTEWKYPYM 146
           GPHY+LRW +PQ IKET  PL +W+Y YM
Sbjct: 534 GPHYILRWTSPQVIKETHKPLGDWRYSYM 562

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score =  166 bits (423), Expect = 4e-50
 Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 10/148 (6%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            ++ GG+ D S G+FIQPTI+   DP   IM EEIFGPV+        D D  L+I  ++
Sbjct: 384 RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKA--NDFDHALEIA-NN 440

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKAG 117
           T Y LTGAV   + +  ++   +     GN Y N   TG++VG  PFGG     T+ KAG
Sbjct: 441 TEYGLTGAVITRNRAHIEQAKREFH--VGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498

Query: 118 GPHYVLRWATPQSIKETFVPLTEWKYPY 145
           GP Y+      +++ E +     ++  +
Sbjct: 499 GPDYLALHMQAKTVSEMYAENLYFQSHH 526

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score =  134 bits (339), Expect = 2e-37
 Identities = 47/135 (34%), Positives = 71/135 (52%), Gaps = 10/135 (7%)

Query: 4    IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
            ++         GYF+  TI+    P  +I  EEIFGPVL +     KD D+ ++   +ST
Sbjct: 879  VLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRA--KDFDQAIEWA-NST 935

Query: 64   PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKAGG 118
             +ALTG +F+       +   + +   GN YIN  +TG++V +QPFGG        KAGG
Sbjct: 936  QFALTGGIFSRSPEHLAKARREFR--VGNLYINRNNTGALVERQPFGGARMSGVGTKAGG 993

Query: 119  PHYVLRWATPQSIKE 133
            P Y+L +  P+ + E
Sbjct: 994  PDYLLHFMDPRVVTE 1008

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score =  129 bits (327), Expect = 6e-36
 Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 12/133 (9%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           +   G   E  G F+ P I +  +     +TEE+FGP+L +  Y  ++L++ L+ + + T
Sbjct: 858 LHFAGPAPE--GCFVAPHIFELTEA--GQLTEEVFGPILHVVRYRPENLERVLRAI-ERT 912

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKAGG 118
            Y LT  V +  +   +  +D ++   GN Y+N    G+VVG QPFGG     T  KAGG
Sbjct: 913 GYGLTLGVHSRIDDSIEAIIDRVQ--VGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGG 970

Query: 119 PHYVLRWATPQSI 131
           PHY+ R+AT Q++
Sbjct: 971 PHYLARFATEQTV 983

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score =  125 bits (316), Expect = 8e-35
 Identities = 51/134 (38%), Positives = 70/134 (52%), Gaps = 10/134 (7%)

Query: 7   GGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYA 66
           GG+  E  GYFI PT+     P  +I  EEIFGPVL++     KD  + L++  D TPY 
Sbjct: 388 GGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRV--KDFAEALEVAND-TPYG 444

Query: 67  LTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKAGGPHY 121
           LTG V++      +    +     GN Y N K TG++VG QPFGG     TN K G   Y
Sbjct: 445 LTGGVYSRKREHLEWARREFH--VGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDY 502

Query: 122 VLRWATPQSIKETF 135
           +  +   +++ E F
Sbjct: 503 LRLFLEMKAVAERF 516

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469

 Score = 74.5 bits (184), Expect = 1e-16
 Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 8/110 (7%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD- 61
           ++  GG  D +   +I PTI+   DP   +M EEIFGPVL I     + L++ ++ +   
Sbjct: 318 KVAYGGTGDAA-TRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCV--RSLEEAIQFINQR 374

Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
             P AL   +F+ ++   K+ +   + ++G    ND      +   PFGG
Sbjct: 375 EKPLAL--YMFSSNDKVIKKMIA--ETSSGGVAANDVIVHITLHSLPFGG 420

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score = 71.8 bits (177), Expect = 1e-15
 Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           GYF +PTI    D    I  EEIFGPV+++  Y   DLD+ ++I  D T Y L G V  +
Sbjct: 361 GYFARPTIFINVDNQMTIAQEEIFGPVMSVITY--NDLDEAIQIAND-TKYGLAGYVIGK 417

Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           D+    +    ++  AG   IN           PFGG
Sbjct: 418 DKETLHKVARSIE--AGTVEIN---EAGRKPDLPFGG 449

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score = 71.4 bits (176), Expect = 1e-15
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 8/97 (8%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           GY+++PT+     P  +I  EEIFGPVL++  +     D+ + +  D T Y LT  + ++
Sbjct: 382 GYYVRPTVFADVKPHMRIFREEIFGPVLSLLPF--NTEDEAVTLAND-TEYGLTNYIQSQ 438

Query: 75  DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           D S  +R    ++  +G   +N      + G   FGG
Sbjct: 439 DRSKCRRIAAQVR--SGMVEVN---GHELPGGSYFGG 470

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score = 71.1 bits (175), Expect = 2e-15
 Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 7/108 (6%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           ++GG +     G +  PT+     P   I  EEIFGPVL+   +  K  D+ + +    T
Sbjct: 370 LLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTF--KTADEAVALANA-T 426

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
            + L+ +V++ +     + +  ++  AG  +IN    G+   + P GG
Sbjct: 427 EFGLSASVWSTNLETALQTIRRIR--AGRCWINSVIDGTP--ELPIGG 470

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score = 70.7 bits (174), Expect = 2e-15
 Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           + GG Q     G+F QPT+    +    I  EE FGP++ I  + D D+D  L      T
Sbjct: 388 VCGGNQVPRP-GFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANA-T 445

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
            + L   VF  D +      D L+  AG  +IN  +   V    PFGG
Sbjct: 446 EFGLASGVFTRDINKALYVSDKLQ--AGTVFINTYNKTDV--AAPFGG 489

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score = 70.6 bits (174), Expect = 2e-15
 Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 28/150 (18%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
             +   + +   G  I P +        ++  EE FGPVL I       +++ ++I    
Sbjct: 347 TALTEIKRE---GNLICPILFDKVTTDMRLAWEEPFGPVLPIIRV--TSVEEAIEISNK- 400

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKA-G---- 117
           + Y L  ++F  D        + L+   G  +IN+K+        PF G   K  G    
Sbjct: 401 SEYGLQASIFTNDFPRAFGIAEQLEV--GTVHINNKTQRGTD-NFPFLGA--KKSGAGIQ 455

Query: 118 GPHYVLRWATPQSIKETFVPLTEWKYPYMG 147
           G  Y        SI+     +T  K     
Sbjct: 456 GVKY--------SIEA----MTTVKSVVFD 473

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score = 69.9 bits (172), Expect = 4e-15
 Identities = 38/108 (35%), Positives = 50/108 (46%), Gaps = 8/108 (7%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
             GGG +    GYFIQPT+        +I  EEIFGPV  I  +  K LD  +K   + T
Sbjct: 369 ECGGGPWGN-KGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKF--KSLDDVIKRANN-T 424

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
            Y L+  +F  D          L+  +G  ++N  S  S   Q PFGG
Sbjct: 425 FYGLSAGIFTNDIDKAITVSSALQ--SGTVWVNCYSVVSA--QCPFGG 468

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score = 69.5 bits (171), Expect = 6e-15
 Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 7/109 (6%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           EI  GG+     G+F QPT+V      ++I+  E+FGPV+++  +     D  +    D 
Sbjct: 368 EITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRF--TGKDDAVAWAND- 424

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           + Y L  +V+ +D S   R    L+   G  +IN      +  + P GG
Sbjct: 425 SDYGLASSVWTKDISKAMRAASRLQ--YGCTWINT--HFMLTNEMPHGG 469

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score = 69.5 bits (171), Expect = 7e-15
 Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 7/109 (6%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           +++ GG      GYFIQPT+         I  EEIFGPV+ I  +  K +++ +    + 
Sbjct: 366 KLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN- 422

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           + Y L  AVF +D          L+  AG  ++N         Q PFGG
Sbjct: 423 STYGLAAAVFTKDLDKANYLSQALQ--AGTVWVNCYDVFGA--QSPFGG 467

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score = 69.1 bits (170), Expect = 9e-15
 Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 28/150 (18%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            ++ G +     G  + PT++    P  ++  EE FGPVL I     KD ++ + +    
Sbjct: 356 TLLSGNKRQ---GNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRV--KDANEAISLSNQ- 409

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKA-G---- 117
           + Y L  ++F +D          L+   G  +IN K+        PF G   K  G    
Sbjct: 410 SDYGLQASIFTKDTDRAINIGKHLEV--GTVHINAKTERGPD-HFPFLGV--KKSGLGVQ 464

Query: 118 GPHYVLRWATPQSIKETFVPLTEWKYPYMG 147
           G           S+      +T  +   + 
Sbjct: 465 GIKP--------SLLS----MTRERVTVLN 482

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score = 68.3 bits (168), Expect = 1e-14
 Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 8/118 (6%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            ++ GG+  +  G +++PTIV        I   E F P+L +F +  ++ ++      + 
Sbjct: 367 TVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKF--QNEEEVFAWNNE- 423

Query: 63  TPYALTGAVFAED--ESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGG 118
               L+ ++F +D    F+           G   +N  ++G+ +G   FGG     GG
Sbjct: 424 VKQGLSSSIFTKDLGRIFRWLGPKGSDC--GIVNVNIPTSGAEIG-GAFGGEKHTGGG 478

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score = 68.1 bits (167), Expect = 2e-14
 Identities = 26/109 (23%), Positives = 38/109 (34%), Gaps = 9/109 (8%)

Query: 6   GGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPY 65
                  +   F+  +    K P      EEIFGP   I V   +++   L +       
Sbjct: 350 QAESPCVASALFVTSSENWRKHP---AWEEEIFGPQSLIVVC--ENVADMLSLSEM-LAG 403

Query: 66  ALTGAVFAE--DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQ-QPFGG 111
           +LT  + A   D     + +  L+  AG    N   TG  VG     GG
Sbjct: 404 SLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGG 452

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score = 67.9 bits (167), Expect = 2e-14
 Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 9/109 (8%)

Query: 4   IIGGGQYDE-SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           + GGG+ +    G+FIQPT+    D    I  EEIFGPVL I  Y     +  + I  D 
Sbjct: 354 VCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPY--DTEEDAIAIAND- 410

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           + Y L G+V+  D     +    ++   G Y IN     +     PFGG
Sbjct: 411 SVYGLAGSVWTTDVPKGIKISQQIR--TGTYGIN---WYAFDPGSPFGG 454

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score = 67.6 bits (166), Expect = 2e-14
 Identities = 28/144 (19%), Positives = 57/144 (39%), Gaps = 18/144 (12%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            +   G  +   G  + P +        +I  EEIFGP++++      D     ++    
Sbjct: 358 TVQVEGPIE---GRLVHPHVFSDVTSDMEIAREEIFGPLISVLKA--DDEAHAAELANA- 411

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPHYV 122
           + + L+ AV+++D     +    +    G  +IND +         FGG+  K  G   +
Sbjct: 412 SDFGLSAAVWSKDIDRAAQFALQIDS--GMVHINDLTVNDEP-HVMFGGS--KNSG---L 463

Query: 123 LRWATPQSIKETFVPLTEWKYPYM 146
            R+    +I+E     T  ++  +
Sbjct: 464 GRFNGDWAIEE----FTTDRWIGI 483

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score = 67.6 bits (166), Expect = 3e-14
 Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 11/112 (9%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTK---DPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIV 59
            ++ GG+       ++QPT V+          +   E+F PV        KDLD+ +++ 
Sbjct: 361 RVLAGGRRLG--PTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEV--KDLDQAIELA 416

Query: 60  TDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
               PY L  AVF  D    +R +  L+   G  YIND      +G  PFGG
Sbjct: 417 NG-RPYGLDAAVFGRDVVKIRRAVRLLEV--GAIYINDMPRHG-IGYYPFGG 464

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score = 67.6 bits (166), Expect = 3e-14
 Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 7/109 (6%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           ++I GG+  +  GY+  PT++      + I+ +E+FGPV+++  +   + ++ +    D 
Sbjct: 366 KVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPF--DNEEQVVNWAND- 422

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           + Y L  +V+ +D     R    L+   G  ++N  +   +V + P GG
Sbjct: 423 SQYGLASSVWTKDVGRAHRVSARLQ--YGCTWVN--THFMLVSEMPHGG 467

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score = 67.2 bits (165), Expect = 4e-14
 Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 10/111 (9%)

Query: 4   IIGGGQYDESC---GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVT 60
            +GG + D      G F +PT++   D   +I+ EE+FGPV+T+  +  +   + +++  
Sbjct: 379 AVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGF--ETEQEAIQLAN 436

Query: 61  DSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           D + Y L GAVF++D    +R  + LK   G  +IND        Q P+GG
Sbjct: 437 D-SIYGLAGAVFSKDIGKAQRVANKLK--LGTVWIND--FHPYFAQAPWGG 482

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score = 66.8 bits (164), Expect = 6e-14
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 8/109 (7%)

Query: 4   IIGGGQYDE-SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           + GG + +    G+FI+PTI+       +I  EE+FGPVL +  +     ++ + +  D 
Sbjct: 360 LTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTF--STEEEAIDLAND- 416

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           T Y L  AV + D    +R     K  AG  ++N   +     Q P+GG
Sbjct: 417 TVYGLGAAVISNDLERCERVTKAFK--AGIVWVNC--SQPCFTQAPWGG 461

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score = 66.4 bits (163), Expect = 6e-14
 Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 9/118 (7%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           + +            + P I+     + +   EE FGP+L +  Y   D    ++     
Sbjct: 348 QPLLAMTQPIDGAALLTPGILDV-SAVAERPDEEFFGPLLQVIRY--SDFAAAIREANA- 403

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGPH 120
           T Y L   + ++     ++ L + +  AG    N + TG+     PFGG    A G H
Sbjct: 404 TQYGLAAGLLSDSRERFEQFLVESR--AGIVNWNKQLTGAAS-SAPFGGI--GASGNH 456

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score = 66.6 bits (163), Expect = 7e-14
 Identities = 18/131 (13%), Positives = 39/131 (29%), Gaps = 25/131 (19%)

Query: 3   EIIGGGQYDESC-----GYFIQPTIVQTKDPLE--KIMTEEIFGPVLTIFVYPDKDLDKT 55
                               + P +    DP     +   E+FGPV ++  Y        
Sbjct: 363 LAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNA 422

Query: 56  ------LKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYIND---------KST 100
                 + +       +L  ++++ D++   R   +L  A  +  ++             
Sbjct: 423 LPEAHAVALARR-GQGSLVASIYSNDDAHLGRLALEL--ADSHGRVHAISPSVQHSQTGH 479

Query: 101 GSVVGQQPFGG 111
           G+V+     GG
Sbjct: 480 GNVMPMSLHGG 490

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score = 65.7 bits (161), Expect = 1e-13
 Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 9/110 (8%)

Query: 4   IIGGGQYDESC--GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
           I GGG  +     G ++QPT+         I  EEIFGPV+ +  +   D D+ L     
Sbjct: 358 ITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDF--DDEDEVLARANA 415

Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
            T + L G VF  D +   R +D L+  AG  +IN  +      + PFGG
Sbjct: 416 -TEFGLAGGVFTADLARAHRVVDGLE--AGTLWIN--TYNLCPVEIPFGG 460

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score = 65.2 bits (160), Expect = 2e-13
 Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 7/109 (6%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            +  GG+  E  GY+  PT++        IM EE FGPVL +  +    L+  + +  D 
Sbjct: 350 RVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAF--DTLEDAISMAND- 406

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           + Y LT +++ ++ +   + +  LK+  G  YIN ++  ++ G     G
Sbjct: 407 SDYGLTSSIYTQNLNVAMKAIKGLKF--GETYINRENFEAMQG--FHAG 451

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score = 64.9 bits (159), Expect = 3e-13
 Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 12/113 (10%)

Query: 4   IIGGGQYDESC-----GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKI 58
           + GG     S      GYF+ P ++         + EEIFGPV+++  +     ++ L+ 
Sbjct: 363 LCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPF--DTEEEVLQR 420

Query: 59  VTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
             + T + L   VF  D S   R   +L+  AG  YIN  +      + PFGG
Sbjct: 421 ANN-TTFGLASGVFTRDISRAHRVAANLE--AGTCYIN--TYSISPVEVPFGG 468

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457

 Score = 64.3 bits (157), Expect = 4e-13
 Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 5/110 (4%)

Query: 2   SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTD 61
            +++ G Q D S    +  T+V   +  + +M+EE+FGP+L +  +    +   +  V  
Sbjct: 325 GQVLVGSQADVS-KRALSATVVDGVEWNDPLMSEELFGPILPVLEF--DSVRTAIDQVNK 381

Query: 62  STPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
             P  L   VF +D    K  ++  +  +G+  +N     +     PFGG
Sbjct: 382 HHPKPLAVYVFGKDMDVAKGIIN--QIQSGDAQVNGVMLHAFSPYLPFGG 429

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score = 64.1 bits (157), Expect = 4e-13
 Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 15/115 (13%)

Query: 4   IIGGGQYDESC-------GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTL 56
           ++GG +   S        G ++ PT+   ++ + KI  EEIFGPVL    +  KD ++ L
Sbjct: 371 LVGGERAKTSFRGEDLSRGNYLLPTVFVGENHM-KIAQEEIFGPVLVAIPF--KDEEEAL 427

Query: 57  KIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           +   D T Y L   VF  D     R   +L+  AG  Y+N  S        PFGG
Sbjct: 428 RKAND-TKYGLAAYVFTRDLERAHRLALELE--AGMVYLN--SHNVRHLPTPFGG 477

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score = 63.0 bits (154), Expect = 1e-12
 Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 11/109 (10%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           +++ GG+ D        PTI++       +   E F PV+ I    +   ++ + I    
Sbjct: 339 KLLLGGKRD---KALFYPTILEVDRDN-ILCKTETFAPVIPIIRTNE---EEMIDIANS- 390

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           T Y L  A+F  D +   +  ++L++  G   IND S        PFGG
Sbjct: 391 TEYGLHSAIFTNDINKSLKFAENLEF--GGVVINDSSLFRQD-NMPFGG 436

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score = 62.2 bits (152), Expect = 2e-12
 Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 11/112 (9%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            ++ GG+     G +   T++    P      +E+FGPV  I V   KD    L +  D 
Sbjct: 332 RLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVA--KDAAHALALAND- 388

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYIND--KSTGSVVGQQPFGGT 112
           + + L+  +F  D++        L+   G  +IN    S   V     FGG 
Sbjct: 389 SEFGLSATIFTADDTLAAEMAARLEC--GGVFINGYSASDARV----AFGGV 434

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score = 61.8 bits (151), Expect = 3e-12
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 11/112 (9%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           ++       +S G F +PTI+        +  +E+FGP+  +FV   +D +  +++  D 
Sbjct: 329 KVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVV--EDDNAAIQLAND- 385

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYIND--KSTGSVVGQQPFGGT 112
           + Y L  +V   D    K+    ++   G   IN    ++G +    PFGG 
Sbjct: 386 SSYGLGSSVIGSDIDRAKKVSAQIET--GMTVINGRWITSGEL----PFGGI 431

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score = 58.0 bits (141), Expect = 6e-11
 Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 9/109 (8%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           E+   G+     G  + P +    D   KI   E+F P+ TI         + + +  D 
Sbjct: 351 ELAVEGKRV---GNVLTPYVFVGADNNSKIAQTELFAPIATIIKA--GSDQEAIDMAND- 404

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           T Y L+ AVF  D    ++    +    G  ++ND+S         FGG
Sbjct: 405 TEYGLSSAVFTSDLEKGEKFALQIDS--GMTHVNDQSVNDSP-NIAFGG 450

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score = 57.0 bits (138), Expect = 1e-10
 Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 9/103 (8%)

Query: 15  GYFIQPTIVQTKDPL---EKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAV 71
           G    P + +T       +  + EE+FGP+  +         +  ++        LT  +
Sbjct: 388 GRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRV--GSPAEMEELARG-FQGQLTATI 444

Query: 72  FAE--DESFQKRCLDDLKYAAGNYYINDKSTGSVVGQ-QPFGG 111
             +  D    +R    L+  AG   +N   TG  V      GG
Sbjct: 445 HMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGG 487

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score = 52.6 bits (127), Expect = 4e-09
 Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 10/111 (9%)

Query: 4   IIGGGQYDESC---GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVT 60
             GG          G + +PT++        ++ EE FGP+L I       +++ ++   
Sbjct: 357 ATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKV--SSMEQAIEFCN 414

Query: 61  DSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 111
           D + Y L+  V  +  +   + + DL+   G  YIN        G     G
Sbjct: 415 D-SIYGLSAYVHTQSFANINQAISDLEV--GEVYINRGMGEQHQG--FHNG 460

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score = 52.2 bits (126), Expect = 7e-09
 Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 9/109 (8%)

Query: 4   IIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDST 63
           + G    +   G F  PT+VQ  D       EE FGP++ + ++  +  ++ +    D T
Sbjct: 356 VAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALF--RTEEEVIDAGND-T 412

Query: 64  PYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQ-PFGG 111
            + L   VF  D    +R    L++  G+   N   TG+    + PFGG
Sbjct: 413 EFGLASYVFTADAERAQRVAAGLRF--GHVGWN---TGTGPTPEAPFGG 456

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score = 51.8 bits (125), Expect = 9e-09
 Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 9/110 (8%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            ++ GG+  +    F +PT++           EE FGP+  +  +     ++ + I    
Sbjct: 357 TVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKF--DTEEEAIAIANA- 413

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQ-PFGG 111
               L G  +++D +   R  + L+   G   +N    G +   + PFGG
Sbjct: 414 ADVGLAGYFYSQDPAQIWRVAEQLEV--GMVGVN---EGLISSVECPFGG 458

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score = 51.8 bits (125), Expect = 9e-09
 Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 9/110 (8%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            ++ GG+  E  G F QPTI+       K+  EE FGP+  +F +  KD    +    D 
Sbjct: 352 RVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRF--KDEADVIAQAND- 408

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQ-PFGG 111
           T + L    +A D S   R  + L+Y  G   IN   TG +  +  PFGG
Sbjct: 409 TEFGLAAYFYARDLSRVFRVGEALEY--GIVGIN---TGIISNEVAPFGG 453

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score = 51.4 bits (124), Expect = 1e-08
 Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 9/110 (8%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
            ++ GG+       F +PT++    P   +  EE FGP+  +F +     ++ +++  D 
Sbjct: 355 SLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRF--ASEEELVRLAND- 411

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQ-PFGG 111
           T + L   +++ D     R  + L+Y  G   IN   TG +  +  PFGG
Sbjct: 412 TEFGLAAYLYSRDIGRVWRVAEALEY--GMVGIN---TGLISNEVAPFGG 456

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score = 46.8 bits (112), Expect = 5e-07
 Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 11/110 (10%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           ++I GG+  E  G F +P I+        +  EE FGP+  +F +     ++ +    D 
Sbjct: 375 KLITGGK--ELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAF--DTEEEVIAQAND- 429

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQ-PFGG 111
           T + L    + E+ S   R  + L+Y  G    N   TG +  +  PFGG
Sbjct: 430 TIFGLAAYFYTENFSRAIRVSEALEY--GMVGHN---TGLISNEVAPFGG 474

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 12/104 (11%), Positives = 29/104 (27%), Gaps = 15/104 (14%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKD--LDKTLKIVTDSTPYALTGAVF 72
              +    +      +     E   P L +F   + +  + + + +V        T  ++
Sbjct: 316 TKVLIGEGLGKVSYDDAF-AHEKLSPTLGMFRADNFEDAVAQAVTMVEI-GGIGHTSGLY 373

Query: 73  AEDESFQKRCLDDLKYAAGNYYINDKSTGSVV--GQQPFGGTND 114
              +    R           Y+ +   T  ++       GG  D
Sbjct: 374 TNQDVNADRI---------RYFGDKMKTARILINIPTTHGGIGD 408

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score = 45.3 bits (108), Expect = 1e-06
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 7/71 (9%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           GYF+ PTI         I  +EIF PVL++ +    +L + ++I   S  +A    +F  
Sbjct: 360 GYFVGPTIFDNVTTEMTIWKDEIFAPVLSV-IRVK-NLKEAIEIANKS-EFANGACLFTS 416

Query: 75  D----ESFQKR 81
           +      F++ 
Sbjct: 417 NSNAIRYFREN 427

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score = 44.2 bits (105), Expect = 3e-06
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 15  GYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE 74
           G+FI   +     P   I   EIFGPVL++ V    + ++ L +      Y    A++  
Sbjct: 385 GHFIGGCLFDDVTPDMDIYKTEIFGPVLSV-VRAR-NYEEALSLPMKH-EYGNGVAIYTR 441

Query: 75  D 75
           D
Sbjct: 442 D 442

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score = 38.1 bits (89), Expect = 5e-04
 Identities = 14/116 (12%), Positives = 28/116 (24%), Gaps = 18/116 (15%)

Query: 7   GGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYA 66
           G          I      TK   +   + E   P+L  +    +   +  ++  D   + 
Sbjct: 315 GLTVPADARVLIAEE---TKVGAKIPYSREKLAPILAFYTA--ETWQEACELSMDILYHE 369

Query: 67  ---LTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTNDKAGGP 119
               T  + +ED+   +              +N             GG        
Sbjct: 370 GAGHTLIIHSEDKEIIREFALKKP--VSRLLVN--------TPGALGGIGATTNLV 415

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	147
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	100.0
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	100.0
2wme_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
4h7n_A	474	Aldehyde dehydrogenase; structural genomics, PSI-b	99.97
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	99.97
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	99.97
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	99.97
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	99.97
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	99.97
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	99.97
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	99.97
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	99.97
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	99.97
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	99.97
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	99.97
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	99.97
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	99.97
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	99.97
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	99.97
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	99.97
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	99.97
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	99.97
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	99.97
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	99.97
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	99.97
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	99.97
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	99.96
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	99.96
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	99.96
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	99.96
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	99.96
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	99.96
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	99.96
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	99.96
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	99.96
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	99.96
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	99.96
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	99.96
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	99.96
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	99.96
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	99.95
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	99.95
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	99.94
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	99.94
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	99.93
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	99.93
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	99.91
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	99.89
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	99.88
4ghk_A	444	Gamma-glutamyl phosphate reductase; structural gen	99.87
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	99.83
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	99.7

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A

Probab=100.00  E-value=9.6e-35  Score=246.65  Aligned_cols=146  Identities=60%  Similarity=1.100  Sum_probs=130.8

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..+...|+|++|||+.+++++|++++||+||||++|++|+++++||||+++.|+++|||+++|||+|.+++.+
T Consensus       413 a~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~  492 (563)
T 4e3x_A          413 LSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQE  492 (563)
T ss_dssp             EEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHH
T ss_pred             CEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHH
Confidence            58999998765579999999999999999999999999999999999755799999982389999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceeceEEEecCCCCcCCCCCCC
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQSIKETFVPLTEWKYPYMG  147 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~v~~~~~~~~~~~~p~~~  147 (147)
                      +++.+++++|.|+||+..++...+.+||||    |.| +.+|++++.+|++.|+|++++.+..+++||+|+
T Consensus       493 ~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~~~~~~~~~yp~~~  563 (563)
T 4e3x_A          493 ATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKETHKPLGDWRYSYMQ  563 (563)
T ss_dssp             HHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTGGGGGBCCEEEEEECSCCCCSSCTTCC
T ss_pred             HHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHHHHHhCceEEEEEeCcCCCcccCCCCC
Confidence            999864469999999987665557899999    444 788999999999999999999899999999995

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*

Probab=100.00  E-value=1.5e-33  Score=235.00  Aligned_cols=138  Identities=25%  Similarity=0.419  Sum_probs=123.6

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..+. .|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       317 a~v~~GG~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gLaa~v~t~d~~~a~~  392 (469)
T 3sza_A          317 QKVAYGGTGDA-ATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRS--LEEAIQFI-NQREKPLALYMFSSNDKVIKK  392 (469)
T ss_dssp             SEEEECCCEET-TTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSS--HHHHHHHH-HHSCCCSEEEEECSCHHHHHH
T ss_pred             CEEEeCCccCC-CCceeCCeeecCCCCcchhhhccccCCeEEEEecCC--HHHHHHHH-HcCCCCceEEEECCCHHHHHH
Confidence            68899998654 689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe-cCCC--CcCCCCC
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET-FVPL--TEWKYPY  145 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~-~~~~--~~~~~p~  145 (147)
                      +++++  ++|.|+||+...+...+.+||||    |.|+++|.+++++|++.|+|..+ .+.+  ..++||+
T Consensus       393 ~~~~l--~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~~~~~~~~ypp  461 (469)
T 3sza_A          393 MIAET--SSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLKVRYPP  461 (469)
T ss_dssp             HHHHC--CCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSCCGGGGGGSSS
T ss_pred             HHHhC--CcceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECCcccccccccccCC
Confidence            99986  99999999986544457899999    77899999999999999999866 3333  5788975

>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*

Probab=100.00  E-value=2e-32  Score=229.18  Aligned_cols=127  Identities=27%  Similarity=0.490  Sum_probs=115.7

Q ss_pred             eEEEECCcccC----CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYDE----SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||....    .+|+|++||||.+++++|++++||+||||++|++|+|  +||||+++ |+++|||++||||+|.+
T Consensus       349 a~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~yGL~a~v~t~d~~  425 (490)
T 2wme_A          349 ARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDD--EDEAIRRA-NDTEYGLAAGVVTQDLA  425 (490)
T ss_dssp             CEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESC--HHHHHHHH-HCSSCCSEEEEECSBHH
T ss_pred             CEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCC--HHHHHHHH-hcCCCCCeEEEEcCCHH
Confidence            68999997542    3689999999999999999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEec
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETF  135 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~  135 (147)
                      ++.++++++  ++|.|+||+...  ..+.+||||    |.|+++|.+++++|++.|+|+++.
T Consensus       426 ~a~~~~~~l--~aG~v~iN~~~~--~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~  483 (490)
T 2wme_A          426 RAHRAIHRL--EAGICWINTWGE--SPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL  483 (490)
T ss_dssp             HHHHHHHHS--CCSEEEESCCSC--CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred             HHHHHHHHC--CeeEEEEeCCCC--CCCCCCcccccccccCchhHHHHHHHhhceeEEEEEC
Confidence            999999986  999999998654  346899999    778999999999999999998763

>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}

Probab=99.97  E-value=1.6e-31  Score=222.87  Aligned_cols=137  Identities=26%  Similarity=0.445  Sum_probs=119.1

Q ss_pred             eEEEECCcccC-CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHH
Q psy1961           2 SEIIGGGQYDE-SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQK   80 (147)
Q Consensus         2 a~v~~GG~~~~-~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~   80 (147)
                      +++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.
T Consensus       329 a~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~GL~a~v~t~d~~~a~  405 (474)
T 4h7n_A          329 AVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPD--VEEAVYLA-NDTIYGLSAAVFAGSEDEAL  405 (474)
T ss_dssp             CEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESS--HHHHHHHH-HCSSCCSEEEEECSSHHHHH
T ss_pred             ceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECC--HHHHHHHH-HcCCCCCeEEEEeCCHHHHH
Confidence            57888987542 4689999999999999999999999999999999998  69999999 99999999999999999999


Q ss_pred             HHHhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceeceEEEec-CCCCcCCC
Q psy1961          81 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQSIKETF-VPLTEWKY  143 (147)
Q Consensus        81 ~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~v~~~~-~~~~~~~~  143 (147)
                      ++++++  ++|+|+||+...+...+.+||||    |.| +.+|.+++++|++.|+|+.+. ....+|+|
T Consensus       406 ~~a~~l--~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~w~  472 (474)
T 4h7n_A          406 KVARQL--NAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWWF  472 (474)
T ss_dssp             HHHTTS--CCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTTSC
T ss_pred             HHHHhC--CeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCCCc
Confidence            999976  99999999987765556889999    444 678999999999999997653 23456665

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*

Probab=99.97  E-value=1.1e-30  Score=219.25  Aligned_cols=126  Identities=26%  Similarity=0.467  Sum_probs=115.3

Q ss_pred             eEEEECCcccC--CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHH
Q psy1961           2 SEIIGGGQYDE--SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQ   79 (147)
Q Consensus         2 a~v~~GG~~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~   79 (147)
                      |++++||....  ..|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++
T Consensus       357 a~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gL~a~v~t~d~~~a  433 (503)
T 3iwj_A          357 ATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFST--EEEAIDLA-NDTVYGLGAAVISNDLERC  433 (503)
T ss_dssp             CEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS--HHHHHHHH-TCSSCCSEEEEECSCHHHH
T ss_pred             CEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCC--HHHHHHHH-hCCCCCcEEEEECCCHHHH
Confidence            58999997643  4689999999999999999999999999999999998  79999999 9999999999999999999


Q ss_pred             HHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          80 KRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        80 ~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      .++++.+  ++|.|+||+...  ..+.+||||    |.|+++|.+++++|++.|+|..+
T Consensus       434 ~~~~~~l--~aG~v~iN~~~~--~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~~  488 (503)
T 3iwj_A          434 ERVTKAF--KAGIVWVNCSQP--CFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQY  488 (503)
T ss_dssp             HHHHHHC--CSSEEEESSSCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred             HHHHHhC--CcceEEEcCCCC--CCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEEEe
Confidence            9999986  999999998754  346899999    77899999999999999999865

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}

Probab=99.97  E-value=4.7e-31  Score=220.60  Aligned_cols=126  Identities=21%  Similarity=0.382  Sum_probs=115.5

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       328 a~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~GL~a~v~t~d~~~a~~  404 (484)
T 3ros_A          328 AKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVED--DNAAIQLA-NDSSYGLGSSVIGSDIDRAKK  404 (484)
T ss_dssp             CEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESS--HHHHHHHH-HSSSCCSCEEEECSCHHHHHH
T ss_pred             CeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCC--HHHHHHHH-hCCCCCcEEEEECCCHHHHHH
Confidence            689999976445789999999999999999999999999999999998  79999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++++  ++|.|+||+...  ..+.+||||    |.|+.+|++++++|++.|+|..+
T Consensus       405 ~~~~l--~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~  457 (484)
T 3ros_A          405 VSAQI--ETGMTVINGRWI--TSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDV  457 (484)
T ss_dssp             HHHHS--CSSCCEETSCCC--CCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEEC
T ss_pred             HHHhC--ccceEEECCCCC--CCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEEC
Confidence            99986  999999999644  357899999    67899999999999999999765

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*

Probab=99.97  E-value=1.4e-30  Score=219.38  Aligned_cols=127  Identities=28%  Similarity=0.494  Sum_probs=116.1

Q ss_pred             eEEEECCcccC----CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYDE----SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||....    ..|+|++||||.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+
T Consensus       376 a~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~GL~a~v~t~d~~  452 (520)
T 3ed6_A          376 ATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET--EQEAIQLA-NDSIYGLAGAVFSKDIG  452 (520)
T ss_dssp             CEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS--HHHHHHHH-TCSSCCSEEEEECSCHH
T ss_pred             CEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC--HHHHHHHH-hCCCCCcEEEEECCCHH
Confidence            58999997542    3689999999999999999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEec
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETF  135 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~  135 (147)
                      ++.++++.+  ++|+|+||+...+  .+.+||||    |.|+++|.+++++|++.|+|+.+.
T Consensus       453 ~a~~~a~~l--~aG~V~iN~~~~~--~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~~  510 (520)
T 3ed6_A          453 KAQRVANKL--KLGTVWINDFHPY--FAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNT  510 (520)
T ss_dssp             HHHHHHHHS--CCSEEEESCSCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEES
T ss_pred             HHHHHHHHC--CcceEEECCCCCC--CCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEcC
Confidence            999999986  9999999998764  36899999    678999999999999999998663

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*

Probab=99.97  E-value=5.6e-31  Score=220.83  Aligned_cols=125  Identities=26%  Similarity=0.429  Sum_probs=115.1

Q ss_pred             EEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHH
Q psy1961           3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRC   82 (147)
Q Consensus         3 ~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~   82 (147)
                      ++++||......|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.++
T Consensus       368 ~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~GL~a~v~t~d~~~a~~~  444 (498)
T 4f3x_A          368 EITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTG--KDDAVAWA-NDSDYGLASSVWTKDISKAMRA  444 (498)
T ss_dssp             EEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECT--TSCHHHHH-HSSSCCSEEEEECSBHHHHHHH
T ss_pred             EEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCC--HHHHHHHH-hcCCCCceEEEECCCHHHHHHH
Confidence            89999976545789999999999999999999999999999999998  49999999 9999999999999999999999


Q ss_pred             HhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          83 LDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        83 ~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      ++.+  ++|+|+||+...+.  +.+||||    |.|+++|.+++++|++.|+|+..
T Consensus       445 a~~l--~aG~V~vN~~~~~~--~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~  496 (498)
T 4f3x_A          445 ASRL--QYGCTWINTHFMLT--NEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMIN  496 (498)
T ss_dssp             HHHC--CSSEEEESCCSCCC--TTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred             HHhC--CcceEEEcCCCCCC--CCCCcCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence            9986  99999999987653  6899999    67899999999999999998754

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*

Probab=99.97  E-value=1.4e-30  Score=218.68  Aligned_cols=124  Identities=23%  Similarity=0.364  Sum_probs=114.0

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..   .|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       355 a~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~--~deAi~~a-N~~~~gL~a~v~t~d~~~a~~  428 (505)
T 3prl_A          355 ATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKD--ANEAISLS-NQSDYGLQASIFTKDTDRAIN  428 (505)
T ss_dssp             CEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESS--HHHHHHHH-HTSSEESEEEEECSCHHHHHH
T ss_pred             CEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCC--HHHHHHHH-hCCCCCeEEEEEcCCHHHHHH
Confidence            589999963   579999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++++  ++|.|+||+.... ..+.+||||    |.|+++|.+++++|++.|+|+.+
T Consensus       429 ~~~~l--~aG~V~iN~~~~~-~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~  482 (505)
T 3prl_A          429 IGKHL--EVGTVHINAKTER-GPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLN  482 (505)
T ss_dssp             HHHTS--CSSEEEESSCCCS-CSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred             HHHHC--CeeEEEEcCCCCC-CCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEe
Confidence            99976  9999999998653 346899999    67899999999999999998755

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}

Probab=99.97  E-value=1.6e-30  Score=219.40  Aligned_cols=126  Identities=24%  Similarity=0.441  Sum_probs=115.7

Q ss_pred             eEEEECCcccCC-CCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHH
Q psy1961           2 SEIIGGGQYDES-CGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQK   80 (147)
Q Consensus         2 a~v~~GG~~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~   80 (147)
                      |++++||..... .|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.
T Consensus       367 a~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~GL~a~v~t~d~~~a~  443 (528)
T 3u4j_A          367 AELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKT--ADEAVALA-NATEFGLSASVWSTNLETAL  443 (528)
T ss_dssp             CEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESS--HHHHHHHH-HCSSCCSEEEEECSBHHHHH
T ss_pred             CEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCC--HHHHHHHH-hcCCCCcEEEEEcCCHHHHH
Confidence            589999976543 689999999999999999999999999999999998  69999999 99999999999999999999


Q ss_pred             HHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          81 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        81 ~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      ++++++  ++|.|+||+....  .+.+||||    |.|+++|.+++++|++.|+|...
T Consensus       444 ~~~~~l--~aG~V~vN~~~~~--~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~  497 (528)
T 3u4j_A          444 QTIRRI--RAGRCWINSVIDG--TPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVT  497 (528)
T ss_dssp             HHHHHS--CCSEEEESCCSCC--CTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEE
T ss_pred             HHHHhC--CeeEEEECCCCCC--CCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEe
Confidence            999986  9999999998653  46899999    67899999999999999999765

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}

Probab=99.97  E-value=1e-30  Score=219.54  Aligned_cols=126  Identities=25%  Similarity=0.415  Sum_probs=115.0

Q ss_pred             eEEEECCcccCC-CCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHH
Q psy1961           2 SEIIGGGQYDES-CGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQK   80 (147)
Q Consensus         2 a~v~~GG~~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~   80 (147)
                      |++++||...+. .|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.
T Consensus       353 a~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gLaa~v~t~d~~~a~  429 (506)
T 3rh9_A          353 ASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRT--EEEVIDAG-NDTEFGLASYVFTADAERAQ  429 (506)
T ss_dssp             CEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECC--HHHHHHHH-TCSSCCSEEEEECSCHHHHH
T ss_pred             CEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCC--HHHHHHHH-hCCCCCceEEEEcCCHHHHH
Confidence            689999975333 689999999999999999999999999999999998  69999999 99999999999999999999


Q ss_pred             HHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          81 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        81 ~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      ++++++  ++|.|+||+....  .+.+||||    |.|+.+|++++++|++.|+|..+
T Consensus       430 ~~~~~l--~aG~V~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~  483 (506)
T 3rh9_A          430 RVAAGL--RFGHVGWNTGTGP--TPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRG  483 (506)
T ss_dssp             HHHHHC--CCSEEEESCCCCC--CTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC
T ss_pred             HHHHhC--CcceEEEcCCCCC--CCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEc
Confidence            999986  9999999998764  36799999    67899999999999999998755

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q

Probab=99.97  E-value=6.9e-31  Score=219.60  Aligned_cols=125  Identities=20%  Similarity=0.351  Sum_probs=114.4

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       354 a~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~GL~a~v~t~d~~~a~~  430 (484)
T 3ifg_A          354 ASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFAS--EEELVRLA-NDTEFGLAAYLYSRDIGRVWR  430 (484)
T ss_dssp             CEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECC--HHHHHHHH-HCSSEESEEEEECCBHHHHHH
T ss_pred             CEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCC--HHHHHHHH-hCCCCCceEEEECCCHHHHHH
Confidence            689999976544789999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      +++.+  ++|+|+||+...  ..+.+||||    |.|+++|.+++++|++.|+|+.
T Consensus       431 ~~~~l--~aG~v~iN~~~~--~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~  482 (484)
T 3ifg_A          431 VAEAL--EYGMVGINTGLI--SNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCV  482 (484)
T ss_dssp             HHHHC--CCSEEEESCSCC--CCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEE
T ss_pred             HHHhC--CcceEEEcCCCC--CCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEE
Confidence            99986  999999998643  346899999    6789999999999999999864

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*

Probab=99.97  E-value=1.3e-30  Score=219.51  Aligned_cols=128  Identities=27%  Similarity=0.436  Sum_probs=114.9

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++||||.+++++|++++||+||||++|++|+++++||||+++ |+++|||+++|||+|.+++.+
T Consensus       385 a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~a-N~~~~GL~a~v~t~d~~~a~~  463 (517)
T 2o2p_A          385 ATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRA-NATEFGLASGVFTRDINKALY  463 (517)
T ss_dssp             CEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHH-TCSSCCSCCEEECSBHHHHHH
T ss_pred             CEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHHHHHHHH-hcCCCCceEEEeCCCHHHHHH
Confidence            6899999764336899999999999999999999999999999999982249999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++.+  ++|+|+||+...  ..+.+||||    |.|+++|.+++++|++.|+|..+
T Consensus       464 ~~~~l--~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~  516 (517)
T 2o2p_A          464 VSDKL--QAGTVFINTYNK--TDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE  516 (517)
T ss_dssp             HHHHC--CSSEEEESCSSC--CCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred             HHHhc--CEeEEEECCCCC--CCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence            99986  999999998754  246899999    77899999999999999998753

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*

Probab=99.97  E-value=1.5e-30  Score=216.10  Aligned_cols=126  Identities=22%  Similarity=0.403  Sum_probs=114.9

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhC-CCCccEEEEEcCCHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS-TPYALTGAVFAEDESFQK   80 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~-~~~gL~~~vft~d~~~~~   80 (147)
                      +++++||..+. .|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+ ++|||+++|||+|.+++.
T Consensus       325 ~~~~~gg~~~~-~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~~gL~a~v~t~d~~~a~  400 (457)
T 3lns_A          325 GQVLVGSQADV-SKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDS--VRTAIDQV-NKHHPKPLAVYVFGKDMDVAK  400 (457)
T ss_dssp             SEEEECCCEEG-GGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESC--HHHHHHHH-HHHSCSCSEEEEECSCHHHHH
T ss_pred             CeEEeCCccCC-CCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCC--HHHHHHHH-HcCCCCCeEEEEECCCHHHHH
Confidence            57899997643 589999999999999999999999999999999998  79999999 99 999999999999999999


Q ss_pred             HHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          81 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        81 ~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      ++++++  ++|.|+||+...+...+.+||||    |.|+++|.+++++|++.|+|.+
T Consensus       401 ~~~~~l--~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~  455 (457)
T 3lns_A          401 GIINQI--QSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRI  455 (457)
T ss_dssp             HHHHTS--CCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEE
T ss_pred             HHHHhC--CcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEe
Confidence            999976  99999999986544457899999    7789999999999999999864

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}

Probab=99.97  E-value=3.3e-30  Score=215.23  Aligned_cols=125  Identities=26%  Similarity=0.368  Sum_probs=114.4

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       351 a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gL~a~v~t~d~~~a~~  427 (481)
T 3jz4_A          351 ARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKD--EADVIAQA-NDTEFGLAAYFYARDLSRVFR  427 (481)
T ss_dssp             CEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECC--HHHHHHHH-HCSSCCSEEEEECCBHHHHHH
T ss_pred             CEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECC--HHHHHHHH-hcCCCCceEEEECCCHHHHHH
Confidence            689999976444689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      +++.+  ++|.|+||+....  .+.+||||    |.|+.+|++++++|++.|+|+.
T Consensus       428 ~~~~l--~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~  479 (481)
T 3jz4_A          428 VGEAL--EYGIVGINTGIIS--NEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI  479 (481)
T ss_dssp             HHHHC--CCSEEEESCSCCC--CSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred             HHHhC--CeeeEEECCCCCC--CCCCCcCCcccCcCCCCchHHHHHHhhceeEEEE
Confidence            99986  9999999997653  46899999    6789999999999999999874

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}

Probab=99.97  E-value=1.6e-30  Score=217.99  Aligned_cols=126  Identities=20%  Similarity=0.358  Sum_probs=113.4

Q ss_pred             eEEEECCcc--cCC--CCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQY--DES--CGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~--~~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||..  ...  .|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+
T Consensus       354 a~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gL~a~v~t~d~~  430 (497)
T 3k2w_A          354 ATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSS--MEQAIEFC-NDSIYGLSAYVHTQSFA  430 (497)
T ss_dssp             CEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESC--HHHHHHHH-TCSSEESEEEEECSBHH
T ss_pred             CEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCC--HHHHHHHH-hcCCCCcEEEEEcCCHH
Confidence            589999973  222  689999999999999999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      ++.++++++  ++|.|+||+...+.  +.+||||    |.|+++|.+++++|++.|+|..+
T Consensus       431 ~a~~~~~~l--~aG~v~vN~~~~~~--~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~  487 (497)
T 3k2w_A          431 NINQAISDL--EVGEVYINRGMGEQ--HQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYIN  487 (497)
T ss_dssp             HHHHHHHHC--CSSEEEESCCSCCC--TTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEE
T ss_pred             HHHHHHHhC--CeeEEEEcCCCCCC--CCCCcCCcCCCcCCccchHHHHHHhcceEEEEEE
Confidence            999999986  99999999987653  6899999    67899999999999999999866

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A

Probab=99.97  E-value=1.6e-30  Score=219.71  Aligned_cols=127  Identities=42%  Similarity=0.767  Sum_probs=114.6

Q ss_pred             EEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHH
Q psy1961           3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRC   82 (147)
Q Consensus         3 ~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~   82 (147)
                      ++++||..+...|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.++
T Consensus       384 ~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~--~deAi~~a-N~~~~gLaa~v~t~d~~~a~~~  460 (538)
T 3qan_A          384 RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAND--FDHALEIA-NNTEYGLTGAVITRNRAHIEQA  460 (538)
T ss_dssp             EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESS--HHHHHHHH-HCSSEESEEEEECSCHHHHHHH
T ss_pred             eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCC--HHHHHHHH-hcCCCCcEEEEECCCHHHHHHH
Confidence            68899986544689999999999999999999999999999999998  79999999 9999999999999999999999


Q ss_pred             HhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceeceEEEe
Q psy1961          83 LDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        83 ~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~v~~~  134 (147)
                      ++.+  ++|.|+||+..++...+.+||||    |.| +.+|.+++++|++.|+|..+
T Consensus       461 ~~~l--~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~  515 (538)
T 3qan_A          461 KREF--HVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEM  515 (538)
T ss_dssp             HHHC--CCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEE
T ss_pred             HHhC--CeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEe
Confidence            9986  99999999544433357899999    778 89999999999999998755

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*

Probab=99.97  E-value=3.7e-30  Score=214.86  Aligned_cols=126  Identities=25%  Similarity=0.440  Sum_probs=114.4

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       349 a~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~--~~eAi~~a-N~~~~gL~a~v~t~d~~~~~~  425 (479)
T 2imp_A          349 ARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDT--LEDAISMA-NDSDYGLTSSIYTQNLNVAMK  425 (479)
T ss_dssp             CEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESS--HHHHHHHH-HCSSEESEEEEECCCHHHHHH
T ss_pred             CEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCC--HHHHHHHH-hcCCCCeeEEEECCCHHHHHH
Confidence            578899975333589999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++++  ++|.|+||+...+  .+.+||||    |.|+++|.+++++|++.|+|..+
T Consensus       426 ~~~~l--~~G~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~  478 (479)
T 2imp_A          426 AIKGL--KFGETYINRENFE--AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ  478 (479)
T ss_dssp             HHHHC--CSSEEEESSCCCC--CTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred             HHHhC--CEeEEEECCCCCC--CCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence            99986  9999999997764  36899999    77889999999999999998643

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*

Probab=99.97  E-value=1.8e-30  Score=217.89  Aligned_cols=133  Identities=29%  Similarity=0.485  Sum_probs=118.6

Q ss_pred             eEEEECCcccCCCC-ceEecEEEEeCC---CCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYDESCG-YFIQPTIVQTKD---PLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~~~~g-~~~~Ptvl~~v~---~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||..   .| +|++|||+.+++   ++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+
T Consensus       360 a~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gL~a~v~t~d~~  433 (501)
T 1uxt_A          360 GRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKD--LDQAIELA-NGRPYGLDAAVFGRDVV  433 (501)
T ss_dssp             CEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESS--HHHHHHHH-HTSSEESEEEEECCCHH
T ss_pred             CEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCC--HHHHHHHH-hcCCCCcEEEEeCCCHH
Confidence            588899965   57 999999999999   9999999999999999999998  69999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEecCCCCcCCC
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETFVPLTEWKY  143 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~~~~~~~~~  143 (147)
                      ++.++++.+  ++|.|+||+.+ +...+.+||||    |.|+++|.+++++|++.|+|......+..+||
T Consensus       434 ~a~~~~~~l--~~G~V~iN~~~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~~~~~~~~~  500 (501)
T 1uxt_A          434 KIRRAVRLL--EVGAIYINDMP-RHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYKGKGVWKY  500 (501)
T ss_dssp             HHHHHHHHC--CSSEEEETSCC-CCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEECTTSSSSSC
T ss_pred             HHHHHHHhC--CEeeEEEeCCC-CCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEEecCCCccccc
Confidence            999999986  99999999873 22356899999    67889999999999999999876444567776

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}

Probab=99.97  E-value=2.3e-30  Score=216.33  Aligned_cols=132  Identities=25%  Similarity=0.383  Sum_probs=100.5

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..   .|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       350 a~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~--~~eAi~~a-n~~~~gL~a~v~t~d~~~a~~  423 (485)
T 4dng_A          350 IELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGS--DQEAIDMA-NDTEYGLSSAVFTSDLEKGEK  423 (485)
T ss_dssp             CEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESS--HHHHHHHH-HCSSCCSEEEEECSCHHHHHH
T ss_pred             CEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCC--HHHHHHHH-hCCCCCceEEEECCCHHHHHH
Confidence            688999975   589999999999999999999999999999999998  79999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEecCCCCcCCCCC
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETFVPLTEWKYPY  145 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~~~~~~~~~p~  145 (147)
                      +++++  ++|.|+||+...+ ..+.+||||    |.|+.+|.+++++|++.|+++.+.   ....||+
T Consensus       424 ~~~~l--~~G~v~vN~~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~---~~~~~~~  485 (485)
T 4dng_A          424 FALQI--DSGMTHVNDQSVN-DSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK---QYRKYPF  485 (485)
T ss_dssp             HHTTS--CSSEEEESCC-----------------------CHHHHHHHEEEEEEEEEC----------
T ss_pred             HHHhc--CcceEEECCCCCC-CCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec---CCcCCCC
Confidence            99975  9999999998754 357899999    678889999999999999997653   3445553

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A

Probab=99.97  E-value=3.8e-30  Score=213.83  Aligned_cols=126  Identities=21%  Similarity=0.387  Sum_probs=115.1

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       331 a~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~--~deAi~~a-n~~~~gL~a~v~t~d~~~a~~  407 (462)
T 3etf_A          331 ARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKD--AAHALALA-NDSEFGLSATIFTADDTLAAE  407 (462)
T ss_dssp             CEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESS--HHHHHHHH-HCSSCCSCEEEECSCHHHHHH
T ss_pred             CEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCC--HHHHHHHH-hCCCCCceEEEECCCHHHHHH
Confidence            688999975545789999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++.+  ++|.|+||+...  ..+.+||||    |.|+++|.+++++|++.|+|..+
T Consensus       408 ~~~~l--~aG~v~vN~~~~--~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~  460 (462)
T 3etf_A          408 MAARL--ECGGVFINGYSA--SDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKN  460 (462)
T ss_dssp             HHHHC--CSSEEEESSCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEC
T ss_pred             HHHhC--CcceEEECCCCC--CCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEe
Confidence            99986  999999999764  346899999    67899999999999999998643

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*

Probab=99.97  E-value=4.1e-30  Score=215.69  Aligned_cols=126  Identities=29%  Similarity=0.448  Sum_probs=114.2

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++||||.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       366 a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gL~a~v~t~d~~~a~~  442 (501)
T 1bxs_A          366 AKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKS--LDDVIKRA-NNTFYGLSAGIFTNDIDKAIT  442 (501)
T ss_dssp             CEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECC--HHHHHHHH-HCSSCCSEEEEECSBHHHHHH
T ss_pred             CEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCC--HHHHHHHH-hcCCCCeeEEEEcCCHHHHHH
Confidence            578889976433689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++++  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|+|...
T Consensus       443 ~~~~l--~aG~V~iN~~~~~--~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~  495 (501)
T 1bxs_A          443 VSSAL--QSGTVWVNCYSVV--SAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK  495 (501)
T ss_dssp             HHHHS--CCSEEEESCCCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred             HHHhc--CeeEEEECCCCCC--CCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEc
Confidence            99986  9999999987542  36899999    67889999999999999999755

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*

Probab=99.97  E-value=1.1e-29  Score=213.79  Aligned_cols=127  Identities=36%  Similarity=0.693  Sum_probs=113.4

Q ss_pred             EEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHH
Q psy1961           3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRC   82 (147)
Q Consensus         3 ~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~   82 (147)
                      ++++||......|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.++
T Consensus       384 ~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~~eAi~~a-N~~~~gL~a~v~t~d~~~a~~~  460 (516)
T 1uzb_A          384 QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKD--FAEALEVA-NDTPYGLTGGVYSRKREHLEWA  460 (516)
T ss_dssp             EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESS--HHHHHHHH-HCSSCCSEEEEECSCHHHHHHH
T ss_pred             CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCC--HHHHHHHH-hcCCCCceEEEECCCHHHHHHH
Confidence            67889975323689999999999999999999999999999999998  79999999 9999999999999999999999


Q ss_pred             HhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceeceEEEe
Q psy1961          83 LDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        83 ~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~v~~~  134 (147)
                      ++.+  ++|.|+||+...+...+.+||||    |.| +++|..++++|++.|+|+.+
T Consensus       461 ~~~l--~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~  515 (516)
T 1uzb_A          461 RREF--HVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER  515 (516)
T ss_dssp             HHHS--CCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred             HHhC--CEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence            9986  99999999976654456899999    667 46899999999999998754

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}

Probab=99.97  E-value=2.7e-30  Score=216.91  Aligned_cols=124  Identities=22%  Similarity=0.342  Sum_probs=113.5

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..  ..|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       374 a~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~GL~a~v~t~d~~~a~~  448 (504)
T 3ek1_A          374 AKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDT--EEEVIAQA-NDTIFGLAAYFYTENFSRAIR  448 (504)
T ss_dssp             CEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECC--HHHHHHHH-HCSSCCSEEEEECCBHHHHHH
T ss_pred             CEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCC--HHHHHHHH-hCCCCCeEEEEEcCCHHHHHH
Confidence            689999975  2589999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++.+  ++|+|+||+...  ..+.+||||    |.|+++|.+++++|++.|+|+..
T Consensus       449 ~a~~l--~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~  501 (504)
T 3ek1_A          449 VSEAL--EYGMVGHNTGLI--SNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSA  501 (504)
T ss_dssp             HHHHS--CCSEEEESCSCC--CCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEE
T ss_pred             HHHhC--CcCeEEECCCCC--CCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEe
Confidence            99986  999999998753  346899999    67889999999999999999754

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A

Probab=99.97  E-value=6.7e-30  Score=214.15  Aligned_cols=124  Identities=21%  Similarity=0.411  Sum_probs=113.0

Q ss_pred             eEEEECCc-ccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHH
Q psy1961           2 SEIIGGGQ-YDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQK   80 (147)
Q Consensus         2 a~v~~GG~-~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~   80 (147)
                      |++++||. .+. .|+|++||||.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.
T Consensus       365 a~~~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gL~a~v~t~d~~~a~  440 (495)
T 1wnd_A          365 IKVITGGEKRKG-NGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDN--EEQVVNWA-NDSQYGLASSVWTKDVGRAH  440 (495)
T ss_dssp             CEEEECCSBCSS-SSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECC--HHHHHHHH-HSSSCCSEEEEECSBHHHHH
T ss_pred             eEEEECCcccCC-CCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCC--HHHHHHHH-hcCCCCeeEEEECCCHHHHH
Confidence            68999997 432 589999999999999999999999999999999998  69999999 99999999999999999999


Q ss_pred             HHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEE
Q psy1961          81 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKE  133 (147)
Q Consensus        81 ~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~  133 (147)
                      ++++++  ++|.|+||+...  ..+.+||||    |.|+++|.+++++|++.|+|..
T Consensus       441 ~~~~~l--~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~  493 (495)
T 1wnd_A          441 RVSARL--QYGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMV  493 (495)
T ss_dssp             HHHHHC--CSSEEEESCCCC--CCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred             HHHHhC--CcceEEECCCCC--CCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEe
Confidence            999986  999999998654  246899999    6688999999999999999864

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...

Probab=99.97  E-value=4.1e-30  Score=215.68  Aligned_cols=126  Identities=27%  Similarity=0.470  Sum_probs=114.5

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++||||.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       365 a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gL~a~v~t~d~~~a~~  441 (500)
T 1o04_A          365 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKT--IEEVVGRA-NNSTYGLAAAVFTKDLDKANY  441 (500)
T ss_dssp             CEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECC--HHHHHHHH-HCSSCCSEEEEECSBHHHHHH
T ss_pred             CEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCC--HHHHHHHH-hcCCCCceEEEECCCHHHHHH
Confidence            578999976433689999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++++  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|+|...
T Consensus       442 ~~~~l--~aG~V~iN~~~~~--~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~  494 (500)
T 1o04_A          442 LSQAL--QAGTVWVNCYDVF--GAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK  494 (500)
T ss_dssp             HHHHC--CSSEEEESCSSCC--CTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE
T ss_pred             HHHhC--CeeEEEECCCCCC--CCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEe
Confidence            99986  9999999987642  36899999    67888999999999999999765

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}

Probab=99.96  E-value=1e-29  Score=213.51  Aligned_cols=124  Identities=20%  Similarity=0.323  Sum_probs=102.0

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..   .|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       357 a~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gL~a~v~t~d~~~a~~  430 (508)
T 3r64_A          357 ATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADD--EAHAAELA-NASDFGLSAAVWSKDIDRAAQ  430 (508)
T ss_dssp             CEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESS--HHHHHHHH-TSSSCCSCEEEECSCHHHHHH
T ss_pred             CEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCC--HHHHHHHH-hCCCCCcEEEEEcCCHHHHHH
Confidence            688999975   579999999999999999999999999999999998  79999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++.+  ++|.|+||+...+ ..+.+||||    |.|+.+|.+++++|++.|+|..+
T Consensus       431 ~~~~l--~aG~V~vN~~~~~-~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~  484 (508)
T 3r64_A          431 FALQI--DSGMVHINDLTVN-DEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIK  484 (508)
T ss_dssp             HHTTS--CSSEEEECC---------------------CCCHHHHHHHTEEEEEEEEE
T ss_pred             HHHhC--CcceEEEcCCCCC-CCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEe
Confidence            99976  9999999998754 357899999    67889999999999999998765

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}

Probab=99.96  E-value=4.2e-30  Score=216.51  Aligned_cols=127  Identities=20%  Similarity=0.325  Sum_probs=113.8

Q ss_pred             eEEEECCccc----CCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHH
Q psy1961           2 SEIIGGGQYD----ESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDES   77 (147)
Q Consensus         2 a~v~~GG~~~----~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~   77 (147)
                      |++++||...    ...|+|++||||.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+
T Consensus       368 a~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gLaa~v~t~d~~  444 (521)
T 4e4g_A          368 AKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARN--YEEALSLP-MKHEYGNGVAIYTRDGD  444 (521)
T ss_dssp             CEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSS--HHHHHHHH-HHSSEESEEEEECSBHH
T ss_pred             CEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCC--HHHHHHHH-hcCCCCeEEEEECCCHH
Confidence            5899999642    24689999999999999999999999999999999998  79999999 99999999999999999


Q ss_pred             HHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCC--CCChHHHHhhcceeceEEEe
Q psy1961          78 FQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND--KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        78 ~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g--~~~g~~~~~~f~~~k~v~~~  134 (147)
                      ++.++++++  ++|.|+||+.... ..+.+||||    |.|  +++|++++++|++.|+|..+
T Consensus       445 ~a~~~~~~l--~aG~V~vN~~~~~-~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~  504 (521)
T 4e4g_A          445 AARDFASRI--NIGMVGVNVPIPV-PLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR  504 (521)
T ss_dssp             HHHHHHHHC--CCSEEEESCSSCC-CCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEEC
T ss_pred             HHHHHHHhC--CeeeEEECCCCCC-CCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEe
Confidence            999999986  9999999997543 246799999    556  67899999999999999866

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}

Probab=99.96  E-value=3.8e-30  Score=216.65  Aligned_cols=126  Identities=28%  Similarity=0.492  Sum_probs=113.7

Q ss_pred             eEEEECCc-cc--CCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHH
Q psy1961           2 SEIIGGGQ-YD--ESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESF   78 (147)
Q Consensus         2 a~v~~GG~-~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~   78 (147)
                      |++++||. .+  ...|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.++
T Consensus       355 a~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gLaa~v~t~d~~~  431 (517)
T 3r31_A          355 ATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDD--EDEVLARA-NATEFGLAGGVFTADLAR  431 (517)
T ss_dssp             CEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECC--HHHHHHHH-HCSSEESEEEEECSCHHH
T ss_pred             CEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCC--HHHHHHHH-hCCCCCeeEEEEeCCHHH
Confidence            68999993 11  13689999999999999999999999999999999998  69999999 999999999999999999


Q ss_pred             HHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          79 QKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        79 ~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +.++++++  ++|.|+||+...  ..+.+||||    |.|+.+|++++++|++.|+|...
T Consensus       432 a~~~~~~l--~aG~V~iN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~  487 (517)
T 3r31_A          432 AHRVVDGL--EAGTLWINTYNL--CPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVS  487 (517)
T ss_dssp             HHHHHHHS--CCSEEEESSCCC--CCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEEC
T ss_pred             HHHHHHHC--CcceEEECCCCC--CCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEc
Confidence            99999986  999999999754  357899999    67889999999999999998755

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}

Probab=99.96  E-value=8.5e-30  Score=213.60  Aligned_cols=123  Identities=27%  Similarity=0.538  Sum_probs=110.6

Q ss_pred             eEEEECCc-ccC--CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHH
Q psy1961           2 SEIIGGGQ-YDE--SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESF   78 (147)
Q Consensus         2 a~v~~GG~-~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~   78 (147)
                      |++++||. ...  ..|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.++
T Consensus       366 a~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~GL~a~v~t~d~~~  442 (497)
T 3i44_A          366 ATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNT--EDEAVTLA-NDTEYGLTNYIQSQDRSK  442 (497)
T ss_dssp             CEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS--HHHHHHHH-HCSSCCSEEEEECSCHHH
T ss_pred             CEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCC--HHHHHHHH-hCCCCCcEEEEECCCHHH
Confidence            68999994 322  2689999999999999999999999999999999998  69999999 999999999999999999


Q ss_pred             HHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          79 QKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        79 ~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +.++++.+  ++|+|+||. ..  ..+.+||||    |.|+++|.+++++|++.|+|.
T Consensus       443 a~~~a~~l--~aG~V~iN~-~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~  495 (497)
T 3i44_A          443 CRRIAAQV--RSGMVEVNG-HE--LPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS  495 (497)
T ss_dssp             HHHHHHHS--CCSEEEETT-CC--CCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred             HHHHHHhC--CcCeEEECC-CC--CCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence            99999986  999999995 22  346899999    678899999999999999984

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}

Probab=99.96  E-value=1.6e-29  Score=212.72  Aligned_cols=126  Identities=29%  Similarity=0.493  Sum_probs=113.9

Q ss_pred             eEEEECCcccC--------CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEc
Q psy1961           2 SEIIGGGQYDE--------SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFA   73 (147)
Q Consensus         2 a~v~~GG~~~~--------~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft   73 (147)
                      |++++||....        ..|+|++|||+.+ +++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||
T Consensus       368 a~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gL~a~v~t  443 (515)
T 2d4e_A          368 ARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKD--EEEALRKA-NDTKYGLAAYVFT  443 (515)
T ss_dssp             CEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESS--HHHHHHHH-HCSSCCSEEEEEC
T ss_pred             CEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCC--HHHHHHHH-hcCCCCceEEEEC
Confidence            58899997543        2589999999999 99999999999999999999998  69999999 9999999999999


Q ss_pred             CCHHHHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEec
Q psy1961          74 EDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETF  135 (147)
Q Consensus        74 ~d~~~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~  135 (147)
                      +|.+++.++++.+  ++|.|+||+...  ..+.+||||    |.|+.+|.+++++|++.|+|....
T Consensus       444 ~d~~~a~~~~~~l--~aG~V~vN~~~~--~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~  505 (515)
T 2d4e_A          444 RDLERAHRLALEL--EAGMVYLNSHNV--RHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPL  505 (515)
T ss_dssp             SBHHHHHHHHHHS--CSSEEEESSSCC--CCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred             CCHHHHHHHHHhC--CeeEEEECCCCC--CCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence            9999999999986  999999998754  346899999    778999999999999999998663

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}

Probab=99.96  E-value=3.8e-30  Score=215.63  Aligned_cols=125  Identities=31%  Similarity=0.532  Sum_probs=113.6

Q ss_pred             eEEEECCcccC--CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHH
Q psy1961           2 SEIIGGGQYDE--SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQ   79 (147)
Q Consensus         2 a~v~~GG~~~~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~   79 (147)
                      |++++||....  ..|+|++||||.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++
T Consensus       351 a~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gL~a~v~t~d~~~a  427 (495)
T 3b4w_A          351 ARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDT--EEDAIAIA-NDSVYGLAGSVWTTDVPKG  427 (495)
T ss_dssp             CEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS--HHHHHHHH-HCSSCCSCCEEECSCHHHH
T ss_pred             CEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCC--HHHHHHHH-hcCCCCeEEEEECCCHHHH
Confidence            58899997543  2589999999999999999999999999999999998  69999999 9999999999999999999


Q ss_pred             HHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          80 KRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        80 ~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      .++++++  ++|.|+||+..   ..+.+||||    |.|+++|.+++++|++.|+|..+
T Consensus       428 ~~~~~~l--~aG~V~iN~~~---~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~  481 (495)
T 3b4w_A          428 IKISQQI--RTGTYGINWYA---FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLP  481 (495)
T ss_dssp             HHHHHHS--CCSCCEESSCC---CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECC
T ss_pred             HHHHHhC--CEeEEEECCCC---CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEc
Confidence            9999986  99999999875   246899999    67889999999999999999754

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*

Probab=99.96  E-value=6.2e-30  Score=214.69  Aligned_cols=126  Identities=27%  Similarity=0.487  Sum_probs=114.4

Q ss_pred             eEEEECCccc--C----CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCC
Q psy1961           2 SEIIGGGQYD--E----SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAED   75 (147)
Q Consensus         2 a~v~~GG~~~--~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d   75 (147)
                      |++++||...  .    ..|+|++||||.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|
T Consensus       360 a~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gL~a~v~t~d  436 (503)
T 1a4s_A          360 ARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDT--EEEVLQRA-NNTTFGLASGVFTRD  436 (503)
T ss_dssp             CEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECC--HHHHHHHH-HCSSCCSEEEEECSB
T ss_pred             CEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCC--HHHHHHHH-hcCCCCceEEEECCC
Confidence            5889999754  2    2589999999999999999999999999999999998  69999999 999999999999999


Q ss_pred             HHHHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          76 ESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      .+++.++++.+  ++|.|+||+....  .+.+||||    |.|+++|.+++++|++.|+|..+
T Consensus       437 ~~~a~~~~~~l--~aG~V~vN~~~~~--~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~  495 (503)
T 1a4s_A          437 ISRAHRVAANL--EAGTCYINTYSIS--PVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVE  495 (503)
T ss_dssp             HHHHHHHHHHS--CSSEEEESCCCCC--CTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEEC
T ss_pred             HHHHHHHHHHC--ceeEEEECCCCCC--CCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEc
Confidence            99999999986  9999999997653  46799999    67899999999999999999754

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*

Probab=99.96  E-value=1.8e-29  Score=211.11  Aligned_cols=122  Identities=25%  Similarity=0.378  Sum_probs=111.6

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..   .|+|++|||+ +++++|++++||+||||++|++|++   ||||+++ |+++|||+++|||+|.+++.+
T Consensus       338 a~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~---deAi~~a-N~~~~gL~a~v~t~d~~~a~~  409 (486)
T 3pqa_A          338 GKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE---EEMIDIA-NSTEYGLHSAIFTNDINKSLK  409 (486)
T ss_dssp             CEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH---HHHHHHH-TCSSCCSEEEEECSBHHHHHH
T ss_pred             CEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH---HHHHHHH-hcCCCCcEEEEECCCHHHHHH
Confidence            588999964   5799999999 9999999999999999999999986   8999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++.+  ++|+|+||+...+. .+.+||||    |.|+++|.+++++|++.|+|..+
T Consensus       410 ~~~~l--~aG~v~vN~~~~~~-~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~  463 (486)
T 3pqa_A          410 FAENL--EFGGVVINDSSLFR-QDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIIS  463 (486)
T ss_dssp             HHHHS--CSSEEEESSCTTCC-CTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEE
T ss_pred             HHHhC--CcceEEEeCCCCcC-CCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEc
Confidence            99986  99999999986543 34899999    67899999999999999998755

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*

Probab=99.96  E-value=9.6e-30  Score=213.38  Aligned_cols=129  Identities=19%  Similarity=0.322  Sum_probs=113.6

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       366 a~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gL~a~v~t~d~~~a~~  442 (500)
T 2j6l_A          366 GTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQN--EEEVFAWN-NEVKQGLSSSIFTKDLGRIFR  442 (500)
T ss_dssp             CEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECC--HHHHHHHH-HTSSCCSEEEEECCCHHHHHH
T ss_pred             CEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCC--HHHHHHHH-hCCCCCcEEEEECCCHHHHHH
Confidence            578899976334689999999999999999999999999999999998  79999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++..++++|.|+||+.... ..+.+||||    |.|+.+|.+++++|++.|+++.+
T Consensus       443 ~~~~~~~~~G~V~vN~~~~~-~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~  498 (500)
T 2j6l_A          443 WLGPKGSDCGIVNVNIPTSG-AEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTIN  498 (500)
T ss_dssp             HHSTTSCCSSEEEESSCTTC-CCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred             HHhhccCCeeEEEECCCCcc-CCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence            99432349999999987543 245789999    77888999999999999999754

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*

Probab=99.96  E-value=1.7e-29  Score=211.36  Aligned_cols=125  Identities=19%  Similarity=0.347  Sum_probs=113.7

Q ss_pred             eEEEECCcccCCCCc-eEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHH
Q psy1961           2 SEIIGGGQYDESCGY-FIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQK   80 (147)
Q Consensus         2 a~v~~GG~~~~~~g~-~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~   80 (147)
                      |++++||..+. .|+ |++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.
T Consensus       356 a~~~~gg~~~~-~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~--~~eAi~~a-N~~~~gL~a~v~t~d~~~a~  431 (487)
T 2w8n_A          356 ATVVTGGKRHQ-LGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDT--EEEAIAIA-NAADVGLAGYFYSQDPAQIW  431 (487)
T ss_dssp             CEEEECCSBCT-TCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESC--HHHHHHHH-TCTTCCSEEEEECCCHHHHH
T ss_pred             CEEEeCCccCC-CCCceECCEEEecCCCcchhhhcccccceEEEEEeCC--HHHHHHHH-hCCCCCceEEEeCCCHHHHH
Confidence            57899997643 589 999999999999999999999999999999998  69999999 99999999999999999999


Q ss_pred             HHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          81 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        81 ~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      ++++.+  ++|.|+||+...+  .+.+||||    |.|+.+|.+++++|++.|++..+
T Consensus       432 ~~~~~l--~aG~v~vN~~~~~--~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~  485 (487)
T 2w8n_A          432 RVAEQL--EVGMVGVNEGLIS--SVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG  485 (487)
T ss_dssp             HHHHHS--CSSEEEESCSCCC--CTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred             HHHHhC--CeeeEEEcCCCCC--CCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence            999986  9999999997764  35799999    66788999999999999998753

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*

Probab=99.96  E-value=2.9e-29  Score=209.28  Aligned_cols=123  Identities=22%  Similarity=0.314  Sum_probs=112.0

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||..   .|+|++||||.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       346 a~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~--~~eai~~a-n~~~~gL~a~v~t~d~~~~~~  419 (475)
T 1euh_A          346 ATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTS--VEEAIEIS-NKSEYGLQASIFTNDFPRAFG  419 (475)
T ss_dssp             CEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESC--HHHHHHHH-HHSSEESEEEEECSCHHHHHH
T ss_pred             CEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCC--HHHHHHHH-hCCCCCeeEEEEeCCHHHHHH
Confidence            578888865   479999999999999999999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcC-CCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYIND-KSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~-~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++.+  ++|.|+||+ ...+  .+.+||||    |.|+++|.+++++|++.|++..+
T Consensus       420 ~~~~l--~~G~v~vN~~~~~~--~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~  473 (475)
T 1euh_A          420 IAEQL--EVGTVHINNKTQRG--TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD  473 (475)
T ss_dssp             HHHHS--CSSEEEESSCCCCC--STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred             HHHhC--CEeeEEECCCCCCC--CCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence            99986  999999998 6543  46899999    77889999999999999998753

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}

Probab=99.96  E-value=4.9e-29  Score=208.44  Aligned_cols=127  Identities=22%  Similarity=0.390  Sum_probs=112.7

Q ss_pred             eEEEECCccc-CCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHH
Q psy1961           2 SEIIGGGQYD-ESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQK   80 (147)
Q Consensus         2 a~v~~GG~~~-~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~   80 (147)
                      |++++||... ...|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.
T Consensus       346 a~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~--~~eai~~a-N~~~~gL~a~v~t~d~~~a~  422 (486)
T 1t90_A          346 ARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKN--LKEAIEIA-NKSEFANGACLFTSNSNAIR  422 (486)
T ss_dssp             CEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS--HHHHHHHH-HHSSEESEEEEECCBHHHHH
T ss_pred             CEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCC--HHHHHHHH-hCCCCCeEEEEEcCCHHHHH
Confidence            5889998642 23589999999999999999999999999999999998  79999999 99999999999999999999


Q ss_pred             HHHhhccCceeEEEEcCCCCCCCCCCccccC----cCC--CCChHHHHhhcceeceEEEe
Q psy1961          81 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND--KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        81 ~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g--~~~g~~~~~~f~~~k~v~~~  134 (147)
                      ++++.+  ++|.|+||+... ...+.+||||    |.|  +.+|.+++++|++.|+|..+
T Consensus       423 ~~~~~l--~aG~v~vN~~~~-~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~  479 (486)
T 1t90_A          423 YFRENI--DAGMLGINLGVP-APMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR  479 (486)
T ss_dssp             HHHHHC--CCSEEEESCSCC-CCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEE
T ss_pred             HHHHhC--CcCeEEECCCCC-CCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEe
Confidence            999986  999999998643 2346799999    556  78999999999999999765

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}

Probab=99.96  E-value=3.5e-29  Score=208.85  Aligned_cols=123  Identities=33%  Similarity=0.550  Sum_probs=96.1

Q ss_pred             eEEEECCccc-C--CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHH
Q psy1961           2 SEIIGGGQYD-E--SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESF   78 (147)
Q Consensus         2 a~v~~GG~~~-~--~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~   78 (147)
                      |++++||... .  ..|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.++
T Consensus       345 a~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~--~~eAi~~a-n~~~~gL~a~v~t~d~~~  421 (478)
T 3ty7_A          345 AELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYND--LDEAIQIA-NDTKYGLAGYVIGKDKET  421 (478)
T ss_dssp             CEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS--HHHHHHHH-TCSSCCSEEEEECSCHHH
T ss_pred             CEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCC--HHHHHHHH-hCCCCCceEEEECCCHHH
Confidence            5889999422 1  3689999999999999999999999999999999998  79999999 999999999999999999


Q ss_pred             HHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEE
Q psy1961          79 QKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        79 ~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~  132 (147)
                      +.++++.+  ++|.|+||+ ..  ..+.+||||    |.|+++|.+++++|++.|+|.
T Consensus       422 a~~~~~~l--~~G~v~vN~-~~--~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~  474 (478)
T 3ty7_A          422 LHKVARSI--EAGTVEINE-AG--RKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA  474 (478)
T ss_dssp             HHHHHHHS--CSSEEEETT-CC------------------------CCGGGEEEEEEE
T ss_pred             HHHHHHhC--CcCeEEECC-CC--CCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEE
Confidence            99999986  999999999 32  246789999    678899999999999999986

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=99.95  E-value=2.4e-28  Score=218.30  Aligned_cols=128  Identities=36%  Similarity=0.684  Sum_probs=115.6

Q ss_pred             EEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHH
Q psy1961           3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRC   82 (147)
Q Consensus         3 ~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~   82 (147)
                      ++++||..+...|+|++|||+.+++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.++
T Consensus       878 ~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d--~deAI~~a-N~t~yGLt~~V~t~d~~~a~~~  954 (1026)
T 4f9i_A          878 HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKD--FDQAIEWA-NSTQFALTGGIFSRSPEHLAKA  954 (1026)
T ss_dssp             EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESS--HHHHHHHH-TCSSCCSEEEEECCCHHHHHHH
T ss_pred             eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCC--HHHHHHHH-HcCCCCCeEEEECCCHHHHHHH
Confidence            68899976544589999999999999999999999999999999998  79999999 9999999999999999999999


Q ss_pred             HhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceeceEEEec
Q psy1961          83 LDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQSIKETF  135 (147)
Q Consensus        83 ~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~v~~~~  135 (147)
                      ++.+  ++|.|+||+.+++...+.+||||    |.| +.+|+.++++|++.|+|+++.
T Consensus       955 ~~~l--~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A          955 RREF--RVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp             HHHS--CCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEEC
T ss_pred             HHhC--CEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEec
Confidence            9976  99999999987766567899999    556 468999999999999998763

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*

Probab=99.95  E-value=8.6e-28  Score=202.90  Aligned_cols=130  Identities=17%  Similarity=0.271  Sum_probs=110.8

Q ss_pred             eEEEECCccc------CCCCceEecEEEEeCCCC--CcccccccccceEEEEEcC---CCCH-----HHHHHHHhhCCCC
Q psy1961           2 SEIIGGGQYD------ESCGYFIQPTIVQTKDPL--EKIMTEEIFGPVLTIFVYP---DKDL-----DKTLKIVTDSTPY   65 (147)
Q Consensus         2 a~v~~GG~~~------~~~g~~~~Ptvl~~v~~~--~~i~~eE~FGPvl~v~~~~---~~~~-----~eai~~a~n~~~~   65 (147)
                      |++++||...      ...|+|++||||.+++++  |++++||+||||++|++|+   |  +     ||||+++ |+++|
T Consensus       361 a~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~--~~~~~~deAi~~a-N~~~~  437 (534)
T 2y53_A          361 AVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTD--TNALPEAHAVALA-RRGQG  437 (534)
T ss_dssp             SEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC-----CTTHHHHHHH-HTTSS
T ss_pred             CEEEECCcccccccccCCCCceecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCC--cccCCHHHHHHHH-hCCCC
Confidence            5788998642      135899999999999877  6999999999999999999   7  7     9999999 99999


Q ss_pred             ccEEEEEcCCHHHHHHHHhhccCceeEEEEcCCCCC-------CCCCCccccC----cCCCC-ChHHHHhhcceeceEEE
Q psy1961          66 ALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTG-------SVVGQQPFGG----TNDKA-GGPHYVLRWATPQSIKE  133 (147)
Q Consensus        66 gL~~~vft~d~~~~~~~~~~~~~~~G~v~iN~~~~~-------~~~~~~pfGG----~~g~~-~g~~~~~~f~~~k~v~~  133 (147)
                      ||+++|||+|.+++.++++.++.++|+|+||+....       ...+.+||||    |.|++ +|..++++|++.|++..
T Consensus       438 gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~  517 (534)
T 2y53_A          438 SLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQA  517 (534)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEE
T ss_pred             CceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeec
Confidence            999999999999999999985337999999986421       1246899999    67787 68999999999999875


Q ss_pred             e
Q psy1961         134 T  134 (147)
Q Consensus       134 ~  134 (147)
                      .
T Consensus       518 ~  518 (534)
T 2y53_A          518 A  518 (534)
T ss_dssp             E
T ss_pred             C
Confidence            4

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}

Probab=99.94  E-value=2.6e-27  Score=199.70  Aligned_cols=125  Identities=22%  Similarity=0.287  Sum_probs=108.4

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCC---CcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcC--CH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPL---EKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE--DE   76 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~---~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~--d~   76 (147)
                      |++++||..   .|+|++|||+.+++++   |++++||+||||++|++|+|  +||||+++ |+++|||+++|||+  |.
T Consensus       378 a~v~~gG~~---~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~--~deAi~~a-N~~~~GL~a~v~t~d~d~  451 (528)
T 3v4c_A          378 VKPLLATES---SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGS--PAEMEELA-RGFQGQLTATIHMDAGDL  451 (528)
T ss_dssp             CEEEECCCC---CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESS--HHHHHHHH-HHCCCEEEEEEECCGGGH
T ss_pred             CEEEeCCCc---CCceeccEEEEecCcccccChhhcccccCCeEEEEecCC--HHHHHHHH-hcCCCCceEEEEcCCCCH
Confidence            588999964   6899999999988887   89999999999999999998  69999999 99999999999999  88


Q ss_pred             HHHHHHHhhccCceeEEEEcCCCCCC-CCCCccccC-----cCCCCC--hHHHHhhcceeceEE
Q psy1961          77 SFQKRCLDDLKYAAGNYYINDKSTGS-VVGQQPFGG-----TNDKAG--GPHYVLRWATPQSIK  132 (147)
Q Consensus        77 ~~~~~~~~~~~~~~G~v~iN~~~~~~-~~~~~pfGG-----~~g~~~--g~~~~~~f~~~k~v~  132 (147)
                      +++.++++.++.++|+|+||+..++. ..+.+||||     |.|+.+  |+.++++|+++|++.
T Consensus       452 ~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~q  515 (528)
T 3v4c_A          452 ETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAYQ  515 (528)
T ss_dssp             HHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEEE
T ss_pred             HHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHhh
Confidence            99999999861139999999976532 346899999     456654  899999999998763

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}

Probab=99.94  E-value=2.4e-27  Score=198.40  Aligned_cols=123  Identities=20%  Similarity=0.352  Sum_probs=106.5

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||......|+|++|||+. ++++|++++||+||||++|++|++  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       347 a~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~--~~eAi~~a-N~~~~gL~a~v~t~d~~~a~~  422 (490)
T 3ju8_A          347 AQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSD--FAAAIREA-NATQYGLAAGLLSDSRERFEQ  422 (490)
T ss_dssp             CEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESS--HHHHHHHH-HCSSCCSEEEEECSCHHHHHH
T ss_pred             CEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCC--HHHHHHHH-hcCCCCceEEEEcCCHHHHHH
Confidence            58899997654578999999999 999999999999999999999998  79999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC-cCCCCChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG-TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG-~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +++++  ++|.|+||+..... .+.+|||| +.+   |..++++|++.|+|++.
T Consensus       423 ~~~~l--~aG~v~vN~~~~~~-~~~~PfGG~~~S---G~~~~~~~~~~k~v~~~  470 (490)
T 3ju8_A          423 FLVES--RAGIVNWNKQLTGA-ASSAPFGGIGAS---GNHRPSAYYAADYCAYP  470 (490)
T ss_dssp             HHHHC--CSSEEEESSCSSCC-CTTSEECCCGGG---BSSCCEETTHHHHHEEE
T ss_pred             HHHhc--CcceEEECCCcCCC-CCCCCcCCcccc---chhHHHhhheeEEEEEe
Confidence            99986  99999999976532 46799999 332   22457899999987643

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*

Probab=99.93  E-value=1.7e-26  Score=193.99  Aligned_cols=124  Identities=23%  Similarity=0.302  Sum_probs=105.0

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCC---CcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCH--
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPL---EKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDE--   76 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~---~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~--   76 (147)
                      |++++||.    .|+|++|||+.+++++   |++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.  
T Consensus       344 a~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~--~deai~~a-N~~~~gLaa~v~t~d~~~  416 (510)
T 1ez0_A          344 IDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCEN--VADMLSLS-EMLAGSLTATIHATEEDY  416 (510)
T ss_dssp             EEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESS--HHHHHHHH-HTCCCEEEEEEECCGGGH
T ss_pred             CEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCC--HHHHHHHH-hcCCCCeEEEEEccCcCH
Confidence            57889986    2899999999988777   99999999999999999998  69999999 9999999999999986  


Q ss_pred             HHHHHHHhhccCceeEEEEcCCCCCC-CCCCccccC-----cCC--CCChHHHHhhcceeceEE
Q psy1961          77 SFQKRCLDDLKYAAGNYYINDKSTGS-VVGQQPFGG-----TND--KAGGPHYVLRWATPQSIK  132 (147)
Q Consensus        77 ~~~~~~~~~~~~~~G~v~iN~~~~~~-~~~~~pfGG-----~~g--~~~g~~~~~~f~~~k~v~  132 (147)
                      +++.++++.++.++|.|+||+...+. ..+.+||||     |.|  +.+|.+++++|++.|++.
T Consensus       417 ~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~  480 (510)
T 1ez0_A          417 PQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ  480 (510)
T ss_dssp             HHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred             HHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence            78899998753379999999876432 235789999     222  236899999999988764

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=99.93  E-value=1.6e-26  Score=206.16  Aligned_cols=125  Identities=35%  Similarity=0.634  Sum_probs=109.9

Q ss_pred             EEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHH
Q psy1961           3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRC   82 (147)
Q Consensus         3 ~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~   82 (147)
                      ++ +||..+. .|+|++|||+.+  +++.+++||+||||++|++|+++++||||+++ |+++|||+++|||+|.+++.++
T Consensus       857 ~v-~gg~~~~-~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~a-N~t~yGLta~V~T~d~~~a~~~  931 (1001)
T 3haz_A          857 RL-HFAGPAP-EGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAI-ERTGYGLTLGVHSRIDDSIEAI  931 (1001)
T ss_dssp             EE-EEECCCC-SSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHH-HHTCCCSEEEEECSCHHHHHHH
T ss_pred             eE-eccccCC-CCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHH-HcCCCCceEEEEcCCHHHHHHH
Confidence            56 7776543 589999999974  67899999999999999999975589999999 9999999999999999999999


Q ss_pred             HhhccCceeEEEEcCCCCCCCCCCccccC----cCC-CCChHHHHhhcceeceEEEe
Q psy1961          83 LDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND-KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        83 ~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g-~~~g~~~~~~f~~~k~v~~~  134 (147)
                      ++.+  ++|.|+||+...+...+.+||||    |.| +.+|++++++|++.|+|+.+
T Consensus       932 a~~l--~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~  986 (1001)
T 3haz_A          932 IDRV--QVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTIN  986 (1001)
T ss_dssp             HHHC--CCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEE
T ss_pred             HHhC--CeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEEC
Confidence            9986  99999999987765556789999    556 46889999999999999865

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1

Probab=99.91  E-value=8.3e-26  Score=188.24  Aligned_cols=116  Identities=15%  Similarity=0.159  Sum_probs=77.7

Q ss_pred             EecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHHHhhccCceeEEEEcC
Q psy1961          18 IQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYIND   97 (147)
Q Consensus        18 ~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~~~~~~~~~G~v~iN~   97 (147)
                      ++||++  ++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.++++++  ++|.|+||+
T Consensus       324 ~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gL~a~v~t~d~~~a~~~~~~l--~aG~V~vN~  396 (468)
T 1vlu_A          324 IQCKTV--DADEEQDFDKEFLSLDLAAKFVTS--TESAIQHI-NTHSSRHTDAIVTENKANAEKFMKGV--DSSGVYWNA  396 (468)
T ss_dssp             HHTTBC---------------CCCCEEEECCS--HHHHHHHH-TTSCSSCEEEEECSCHHHHHHHHHHC--CCSEEEESS
T ss_pred             CCCcee--eCCCchhhhcCccCceEEEEEeCC--HHHHHHHH-HhCCCCceEEEEeCCHHHHHHHHHhC--CeeEEEEcC
Confidence            689997  788999999999999999999998  79999999 99999999999999999999999986  999999999


Q ss_pred             CCCCCCCCCcccc-----C----cCCCCChHHHHhhcceeceEEEecCCCCcCCCCCC
Q psy1961          98 KSTGSVVGQQPFG-----G----TNDKAGGPHYVLRWATPQSIKETFVPLTEWKYPYM  146 (147)
Q Consensus        98 ~~~~~~~~~~pfG-----G----~~g~~~g~~~~~~f~~~k~v~~~~~~~~~~~~p~~  146 (147)
                      ....  .+.+|||     |    |.|+. |..++++|++.|+|....   ...|.||.
T Consensus       397 ~~~~--~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~---~~~r~py~  448 (468)
T 1vlu_A          397 STRF--ADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD---GQVASDYL  448 (468)
T ss_dssp             CGGG--CC-----------------------CCSGGGEEEEEEEECS---SCCSCCC-
T ss_pred             CCCC--CCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC---CCcCcccc
Confidence            7653  3578999     8    44666 899999999999997552   34445553

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}

Probab=99.89  E-value=9.2e-24  Score=175.71  Aligned_cols=117  Identities=17%  Similarity=0.135  Sum_probs=92.5

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |+++.|+... ..|+|+        +++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       310 a~v~~G~~~~-~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~--~deAi~~a-N~~~~gLaa~v~t~d~~~a~~  377 (463)
T 2h5g_A          310 VKIHAGPKFA-SYLTFS--------PSEVKSLRTEYGDLELCIEVVDN--VQDAIDHI-HKYGSSHTDVIVTEDENTAEF  377 (463)
T ss_dssp             CEEEECHHHH-C-----------------CCSSCCCCSSEEEEEEESS--HHHHHHHH-HHHCCSSEEEEECSCHHHHHH
T ss_pred             CEEEeCCccc-ccCccC--------CCCchHHhccccCceEEEEEeCC--HHHHHHHH-HcCCCCceEEEEeCCHHHHHH
Confidence            4666444322 235543        57899999999999999999998  69999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCC--CC--ChHHHHhhcceeceEEEe
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TND--KA--GGPHYVLRWATPQSIKET  134 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g--~~--~g~~~~~~f~~~k~v~~~  134 (147)
                      +++.+  ++|.|+||+....  .+.+||||    |.|  +.  +|.+++++|++.|+|...
T Consensus       378 ~~~~l--~aG~V~iN~~~~~--~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~  434 (463)
T 2h5g_A          378 FLQHV--DSACVFWNASTRF--SDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRG  434 (463)
T ss_dssp             HHHHC--CSSEEEESSCGGG--CSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEEC
T ss_pred             HHHhC--CeeEEEEeCCccC--CCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEEC
Confidence            99986  9999999997653  46799999    445  43  899999999999999755

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1

Probab=99.88  E-value=1.5e-23  Score=172.86  Aligned_cols=105  Identities=17%  Similarity=0.231  Sum_probs=91.4

Q ss_pred             cEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHHHhhccCceeEEEEcCCC
Q psy1961          20 PTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKS   99 (147)
Q Consensus        20 Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~~~~~~~~~G~v~iN~~~   99 (147)
                      |||   ++.+|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.++++++  ++|.|+||+..
T Consensus       309 Ptl---~~~~~~i~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gL~a~v~t~d~~~a~~~~~~l--~~G~V~iN~~~  380 (427)
T 1o20_A          309 PDV---VPATEDDWPTEYLDLIIAIKVVKN--VDEAIEHI-KKYSTGHSESILTENYSNAKKFVSEI--DAAAVYVNAST  380 (427)
T ss_dssp             TTS---EECCGGGTTCCCCSSEEEEEEESS--HHHHHHHH-HHHCCSSEEEEECSCHHHHHHHHHHC--CSSEEEESSCG
T ss_pred             Ccc---cCCCcchhhcccccceEEEEEECC--HHHHHHHH-HhCCCCCeEEEEeCCHHHHHHHHHhC--CccEEEECCCC
Confidence            996   345789999999999999999998  69999999 99999999999999999999999986  99999999876


Q ss_pred             CCCCCCCccccC----cCC----CCChHHHHhhcceeceEEEe
Q psy1961         100 TGSVVGQQPFGG----TND----KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus       100 ~~~~~~~~pfGG----~~g----~~~g~~~~~~f~~~k~v~~~  134 (147)
                      ..  .+.+||||    |.|    +.+|++++++|++.|+|...
T Consensus       381 ~~--~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~  421 (427)
T 1o20_A          381 RF--TDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLG  421 (427)
T ss_dssp             GG--CSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEEC
T ss_pred             cc--CCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEEC
Confidence            52  35789998    222    35689999999999999754

>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}

Probab=99.87  E-value=5e-23  Score=170.40  Aligned_cols=102  Identities=19%  Similarity=0.226  Sum_probs=86.9

Q ss_pred             CCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHHHhhccCceeEEEEcCCCCCCCCC
Q psy1961          26 KDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVG  105 (147)
Q Consensus        26 v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~~~~~~~~~G~v~iN~~~~~~~~~  105 (147)
                      ++.+|++++||+||||++|++|+|  +||||+++ |+++|||++||||+|.+++.++++.+  ++|.|+||+....  .+
T Consensus       329 ~~~~~~~~~eEiFGPVl~v~~~~~--~deAi~~a-N~~~~gL~a~v~t~d~~~a~~~a~~l--~aG~V~vN~~~~~--~~  401 (444)
T 4ghk_A          329 VDATDEDWRTEYLAPVLAIKIVDG--IDAAIEHI-NEYGSHHTDAIVTEDHDRAMRFLREV--DSASVMVNASTRF--AD  401 (444)
T ss_dssp             EECCSGGGTCC---CEEEEEEESS--HHHHHHHH-HHHSCSSEEEEECSBHHHHHHHHHHC--CSSEEEEEECGGG--CS
T ss_pred             cCCCchhhhccccCceEEEEEeCC--HHHHHHHH-HhCCCCceEEEEeCCHHHHHHHHHhC--CcceEEEcCCCcc--CC
Confidence            356789999999999999999998  79999999 99999999999999999999999986  9999999998653  36


Q ss_pred             CccccCcC----C----CCChHHHHhhcceeceEEEe
Q psy1961         106 QQPFGGTN----D----KAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus       106 ~~pfGG~~----g----~~~g~~~~~~f~~~k~v~~~  134 (147)
                      .+||||+.    |    +.+|++++++|++.|+|...
T Consensus       402 ~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~  438 (444)
T 4ghk_A          402 GFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLG  438 (444)
T ss_dssp             TTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEE
T ss_pred             CCCcCCcccccccCCcccCCChhHHHhhceEEEEEEC
Confidence            78999932    2    45799999999999998744

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}

Probab=99.83  E-value=8.9e-21  Score=157.62  Aligned_cols=104  Identities=11%  Similarity=0.069  Sum_probs=90.0

Q ss_pred             eCCCCCcccccccccceEEEEEcCCCCHHHHH----HHHhhCCCCccEEEEEcCCHHHHHHHHhhccCceeEEEEcCCCC
Q psy1961          25 TKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTL----KIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKST  100 (147)
Q Consensus        25 ~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai----~~a~n~~~~gL~~~vft~d~~~~~~~~~~~~~~~G~v~iN~~~~  100 (147)
                      ++++++++. ||+||||++|++|+|  +||||    +++ |+++|||+++|||+|.+++.++++.+  ++|.|+||+...
T Consensus       331 ~v~~~~~~~-~E~fgPVl~v~~~~~--~~eAi~~ai~~~-n~~~~gl~a~i~t~d~~~a~~~~~~l--~~G~v~vN~~~~  404 (464)
T 3k9d_A          331 KVGAKIPYS-REKLAPILAFYTAET--WQEACELSMDIL-YHEGAGHTLIIHSEDKEIIREFALKK--PVSRLLVNTPGA  404 (464)
T ss_dssp             CCSTTCGGG-SCCCSSEEEEEEESS--HHHHHHHHHHHH-HHTTTEEEEEEECSCHHHHHHHHHHS--SEEEEEESSCHH
T ss_pred             CCCCCCccc-ccccCceEEEEEeCC--HHHHHHHHHHHH-hcCCCCCeEEEEeCCHHHHHHHHHhC--CEeEEEEECCcc
Confidence            477888865 899999999999998  79997    789 99999999999999999999999986  999999999864


Q ss_pred             C-------CCCCCccccC---cCCCCChHHHHhhcceeceEEEe
Q psy1961         101 G-------SVVGQQPFGG---TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus       101 ~-------~~~~~~pfGG---~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      +       ...+.+||||   |+|..++..+++.|++.|+|.+.
T Consensus       405 ~~~~g~~~~~~~~~~~G~G~~G~g~~~~~~~~~~~~~~k~v~~~  448 (464)
T 3k9d_A          405 LGGIGATTNLVPALTLGCGAVGGSSSSDNIGPENLFNIRRIATG  448 (464)
T ss_dssp             HHHTTSSSSSCCCSCBBCTGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred             ccccccCCCCCccccccCcCCCCCcCCCCCCHHHheEEEEEEec
Confidence            2       1357899996   56677788889999999998744

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}

Probab=99.70  E-value=3.7e-18  Score=141.45  Aligned_cols=80  Identities=13%  Similarity=0.190  Sum_probs=70.7

Q ss_pred             CCceEecEE-------EEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCC----CccEEEEEcCCHHHHHH-
Q psy1961          14 CGYFIQPTI-------VQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTP----YALTGAVFAEDESFQKR-   81 (147)
Q Consensus        14 ~g~~~~Ptv-------l~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~----~gL~~~vft~d~~~~~~-   81 (147)
                      .|+|++||+       +.++++++++.+ |+||||++|++|+|  +||||+++ |++.    |||+++|||+|.+++.+ 
T Consensus       308 ~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~--~~eAi~~a-n~~~~~~g~Glta~i~t~d~~~a~~i  383 (452)
T 3my7_A          308 AGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADN--FEDAVAQA-VTMVEIGGIGHTSGLYTNQDVNADRI  383 (452)
T ss_dssp             HTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESS--HHHHHHHH-HHHHHHHSSCCEEEEESCTTTCHHHH
T ss_pred             CCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCC--HHHHHHHH-HhcccccCCCCEEEEEcCCHHHHHHH
Confidence            589999997       667889999876 89999999999998  79999999 9985    99999999999777777 


Q ss_pred             --HHhhccCceeEEEEcCCC
Q psy1961          82 --CLDDLKYAAGNYYINDKS   99 (147)
Q Consensus        82 --~~~~~~~~~G~v~iN~~~   99 (147)
                        +++++  ++|+|+||+..
T Consensus       384 ~~~a~~l--~~G~V~VN~~~  401 (452)
T 3my7_A          384 RYFGDKM--KTARILINIPT  401 (452)
T ss_dssp             HHHHHHC--CCSEEEESCCC
T ss_pred             HHHHHhC--CEEEEEECCCC
Confidence              77765  99999999854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	147
d1uzba_	516	c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen	3e-36
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-28
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	5e-27
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-25
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	2e-23
d1ez0a_	504	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	8e-23
d1ad3a_	446	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-22
d1ky8a_	499	c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3	6e-21
d1euha_	474	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-20
d1o20a_	414	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	1e-10

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  128 bits (321), Expect = 3e-36
 Identities = 51/138 (36%), Positives = 73/138 (52%), Gaps = 10/138 (7%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           +++ GG+  E  GYFI PT+     P  +I  EEIFGPVL++     KD  + L++  D 
Sbjct: 384 QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRV--KDFAEALEVAND- 440

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG-----TNDKAG 117
           TPY LTG V++      +    +     GN Y N K TG++VG QPFGG     TN K G
Sbjct: 441 TPYGLTGGVYSRKREHLEWARREFH--VGNLYFNRKITGALVGVQPFGGFKLSGTNAKTG 498

Query: 118 GPHYVLRWATPQSIKETF 135
              Y+  +   +++ E F
Sbjct: 499 ALDYLRLFLEMKAVAERF 516

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  105 bits (263), Expect = 4e-28
 Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 11/133 (8%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           +++ GG      GYFIQPT+         I  EEIFGPV+ I  +  K +++ +    + 
Sbjct: 360 KLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKF--KTIEEVVGRANN- 416

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTND----KAGG 118
           + Y L  AVF +D          L+  AG  ++N         Q PFGG       +  G
Sbjct: 417 STYGLAAAVFTKDLDKANYLSQALQ--AGTVWVNC--YDVFGAQSPFGGYKMSGSGRELG 472

Query: 119 PHYVLRWATPQSI 131
            + +  +   +++
Sbjct: 473 EYGLQAYTEVKTV 485

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score =  102 bits (255), Expect = 5e-27
 Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 11/133 (8%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           ++  GG    + GYFIQPT+        +I  EEIFGPV  I  +  K LD  +K   + 
Sbjct: 360 KLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKF--KSLDDVIKRANN- 416

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTND----KAGG 118
           T Y L+  +F  D          L+  +G  ++N      V  Q PFGG       +  G
Sbjct: 417 TFYGLSAGIFTNDIDKAITVSSALQ--SGTVWVNC--YSVVSAQCPFGGFKMSGNGRELG 472

Query: 119 PHYVLRWATPQSI 131
            +    +   +++
Sbjct: 473 EYGFHEYTEVKTV 485

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score = 97.5 bits (242), Expect = 4e-25
 Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 11/133 (8%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           E +         GYF+ P ++         + EEIFGPV+++  +     ++ L+   + 
Sbjct: 367 EPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPF--DTEEEVLQRANN- 423

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTND----KAGG 118
           T + L   VF  D S   R   +L+  AG  YIN  S   V  + PFGG       +  G
Sbjct: 424 TTFGLASGVFTRDISRAHRVAANLE--AGTCYINTYSISPV--EVPFGGYKMSGFGRENG 479

Query: 119 PHYVLRWATPQSI 131
              V  ++  +++
Sbjct: 480 QATVDYYSQLKTV 492

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score = 92.6 bits (229), Expect = 2e-23
 Identities = 27/133 (20%), Positives = 60/133 (45%), Gaps = 11/133 (8%)

Query: 3   EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDS 62
           ++I GG+  +  GY+  PT++      + I+ +E+FGPV+++  +   + ++ +    D 
Sbjct: 345 KVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPF--DNEEQVVNWAND- 401

Query: 63  TPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTND----KAGG 118
           + Y L  +V+ +D     R    L+   G  ++N      +V + P GG       K   
Sbjct: 402 SQYGLASSVWTKDVGRAHRVSARLQ--YGCTWVNTHFM--LVSEMPHGGQKLSGYGKDMS 457

Query: 119 PHYVLRWATPQSI 131
            + +  +   + +
Sbjct: 458 LYGLEDYTVVRHV 470

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

 Score = 90.9 bits (224), Expect = 8e-23
 Identities = 29/142 (20%), Positives = 51/142 (35%), Gaps = 17/142 (11%)

Query: 9   QYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALT 68
                    +  T  +          EEIFGP   I     +++   L +       +LT
Sbjct: 347 AESPCVASALFVTSSEN-WRKHPAWEEEIFGPQSLI--VVCENVADMLSLSEM-LAGSLT 402

Query: 69  GAVFAEDESFQK--RCLDDLKYAAGNYYINDKSTGSVVGQQ-----PFGGTND---KAGG 118
             + A +E + +  + +  L+  AG    N   TG  VG       P+  +      + G
Sbjct: 403 ATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVG 462

Query: 119 PHYVLRWATP---QSIKETFVP 137
              + RW  P   Q++ E+ +P
Sbjct: 463 AEAIHRWLRPVAYQALPESLLP 484

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 89.6 bits (221), Expect = 2e-22
 Identities = 35/151 (23%), Positives = 61/151 (40%), Gaps = 12/151 (7%)

Query: 1   MSEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVT 60
            ++ +  G   +    +I PTI+   DP   +M EEIFGPV+ I       L++ ++ + 
Sbjct: 297 DNQKVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVR--SLEEAIQFIN 354

Query: 61  DSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTND----KA 116
                 L   VF+ +E   K+ + +    +G    ND      V   PFGG  +      
Sbjct: 355 Q-REKPLALYVFSNNEKVIKKMIAETS--SGGVTANDVIVHITVPTLPFGGVGNSGMGAY 411

Query: 117 GGPHYVLRWATPQS--IKETFV-PLTEWKYP 144
            G      ++  +S  +K        + +YP
Sbjct: 412 HGKKSFETFSHRRSCLVKSLLNEEAHKARYP 442

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

 Score = 85.4 bits (210), Expect = 6e-21
 Identities = 33/134 (24%), Positives = 50/134 (37%), Gaps = 10/134 (7%)

Query: 14  CGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFA 73
                       +     +   E+F PV +      KDLD+ +++     PY L  AVF 
Sbjct: 371 YVQPTLVEAPADRVKDMVLYKREVFAPVASAVEV--KDLDQAIELANG-RPYGLDAAVFG 427

Query: 74  EDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTND----KAGGPHYVLRWATPQ 129
            D    +R +  L+   G  YIND      +G  PFGG       + G  + V      +
Sbjct: 428 RDVVKIRRAVRLLE--VGAIYINDMPRHG-IGYYPFGGRKKSGVFREGIGYAVEAVTAYK 484

Query: 130 SIKETFVPLTEWKY 143
           +I   +     WKY
Sbjct: 485 TIVFNYKGKGVWKY 498

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

 Score = 83.0 bits (204), Expect = 4e-20
 Identities = 28/127 (22%), Positives = 48/127 (37%), Gaps = 10/127 (7%)

Query: 9   QYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALT 68
              +  G  I P +        ++  EE FGPVL I       +++ ++I    + Y L 
Sbjct: 349 TEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRV--TSVEEAIEISNK-SEYGLQ 405

Query: 69  GAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTND----KAGGPHYVLR 124
            ++F  D        + L+   G  +IN+K T       PF G         G  + +  
Sbjct: 406 ASIFTNDFPRAFGIAEQLE--VGTVHINNK-TQRGTDNFPFLGAKKSGAGIQGVKYSIEA 462

Query: 125 WATPQSI 131
             T +S+
Sbjct: 463 MTTVKSV 469

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 55.8 bits (133), Expect = 1e-10
 Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 14/135 (10%)

Query: 14  CGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFA 73
                +  +       E     E    ++ I V   K++D+ ++ +        + ++  
Sbjct: 287 GCEKTREIVPDVVPATEDDWPTEYLDLIIAIKVV--KNVDEAIEHIKK-YSTGHSESILT 343

Query: 74  EDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGTND-KAGGPHYVLRWATPQSIK 132
           E+ S  K+ + ++   A   Y+N  +  +  GQ  FG          H       P  ++
Sbjct: 344 ENYSNAKKFVSEID--AAAVYVNASTRFTDGGQFGFGAEIGISTQRFHA----RGPVGLR 397

Query: 133 ETFVPLTEWKYPYMG 147
           E    LT +K+  +G
Sbjct: 398 E----LTTYKFVVLG 408

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	147
d1o04a_	494	Aldehyde reductase (dehydrogenase), ALDH {Human (H	99.97
d1ad3a_	446	Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat	99.97
d1bxsa_	494	Aldehyde reductase (dehydrogenase), ALDH {Sheep (O	99.97
d1uzba_	516	1-pyrroline-5-carboxylate dehydrogenase {Thermus t	99.97
d1wnda_	474	Putative betaine aldehyde dehydrogenase YdcW {Esch	99.97
d1a4sa_	503	Aldehyde reductase (dehydrogenase), ALDH {Baltic c	99.97
d1euha_	474	Aldehyde reductase (dehydrogenase), ALDH {Streptoc	99.94
d1ky8a_	499	Non-phosphorylating glyceraldehyde-3-phosphate deh	99.94
d1ez0a_	504	Aldehyde reductase (dehydrogenase), ALDH {Vibrio h	99.85
d1o20a_	414	Gamma-glutamyl phosphate reductase {Thermotoga mar	99.84
d1vlua_	436	Gamma-glutamyl phosphate reductase {Baker's yeast	99.52

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.97  E-value=1.6e-31  Score=221.70  Aligned_cols=130  Identities=28%  Similarity=0.480  Sum_probs=118.4

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||....+.|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.+
T Consensus       359 a~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~~--~~eai~~a-n~~~~gL~a~i~s~d~~~~~~  435 (494)
T d1o04a_         359 AKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKT--IEEVVGRA-NNSTYGLAAAVFTKDLDKANY  435 (494)
T ss_dssp             CEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECC--HHHHHHHH-HCSSCCSEEEEECSBHHHHHH
T ss_pred             CEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeCC--HHHHHHHH-hCCCCCCeEEEEeCCHHHHHH
Confidence            689999987767899999999999999999999999999999999998  79999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEecCCCC
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETFVPLT  139 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~~~~~  139 (147)
                      +++.+  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|+|+.+ ||..
T Consensus       436 ~~~~l--~~G~v~iN~~~~~--~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~v~~~-~p~k  492 (494)
T d1o04a_         436 LSQAL--QAGTVWVNCYDVF--GAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVK-VPQK  492 (494)
T ss_dssp             HHHHC--CSSEEEESCSSCC--CTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEE-CSCC
T ss_pred             HHHhC--CeeEEEEcCCCCC--CCCCCcCCcccccCCchhHHHHHHHhcCeEEEEEe-CCCC
Confidence            99986  9999999987653  36799999    67888999999999999999876 5544

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=3.4e-31  Score=217.28  Aligned_cols=138  Identities=26%  Similarity=0.444  Sum_probs=120.0

Q ss_pred             EEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHH
Q psy1961           3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRC   82 (147)
Q Consensus         3 ~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~   82 (147)
                      +...|+..+ ..++|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.++
T Consensus       300 ~~~~g~~~~-~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~--~~eai~~~-n~~~~gl~a~v~t~d~~~a~~~  375 (446)
T d1ad3a_         300 KVAHGGTWD-QSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRS--LEEAIQFI-NQREKPLALYVFSNNEKVIKKM  375 (446)
T ss_dssp             CEEECCCEE-TTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSS--HHHHHHHH-HTSCCCSEEEEECSCHHHHHHH
T ss_pred             hcccceeec-CCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEecc--HHHHHHHH-hCCCCCCEEEEEcCCHHHHHHH
Confidence            444444433 3678999999999999999999999999999999998  79999999 9999999999999999999999


Q ss_pred             HhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEec-CC--CCcCCCCCC
Q psy1961          83 LDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETF-VP--LTEWKYPYM  146 (147)
Q Consensus        83 ~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~-~~--~~~~~~p~~  146 (147)
                      ++.+  ++|.|+||+...+...+.+||||    |.|+.+|.+++++||+.|+|+++. +.  +.++|||++
T Consensus       376 ~~~l--~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~~~~~~~~~~~~~pp~  444 (446)
T d1ad3a_         376 IAET--SSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVKSLLNEEAHKARYPPS  444 (446)
T ss_dssp             HTTC--CCSEEEESSSSGGGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEECCCCCCCTTGGGSSSC
T ss_pred             HHhC--CEeEEEEeCCccCCCCCCCCccccccceeccchHHHHHHHHhceeEEEEccCCCCccccccCCCC
Confidence            9976  99999999987665567899999    778999999999999999988653 32  457999875

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=99.97  E-value=3.8e-31  Score=219.27  Aligned_cols=127  Identities=29%  Similarity=0.447  Sum_probs=117.2

Q ss_pred             eEEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKR   81 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~   81 (147)
                      |++++||....+.|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+.+.+
T Consensus       359 a~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~~~--~~eai~~~-n~~~~gL~a~i~t~d~~~~~~  435 (494)
T d1bxsa_         359 AKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKS--LDDVIKRA-NNTFYGLSAGIFTNDIDKAIT  435 (494)
T ss_dssp             CEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECC--HHHHHHHH-HCSSCCSEEEEECSBHHHHHH
T ss_pred             CEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEECC--HHHHHHHH-hCCCCCCeEEEEeCCHHHHHH
Confidence            688999987666899999999999999999999999999999999998  79999999 999999999999999999999


Q ss_pred             HHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEec
Q psy1961          82 CLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETF  135 (147)
Q Consensus        82 ~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~  135 (147)
                      +++++  ++|.|+||+....  .+.+||||    |.|+.+|.+++++|++.|+|+.+.
T Consensus       436 ~~~~l--~~G~v~iN~~~~~--~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~i~~~~  489 (494)
T d1bxsa_         436 VSSAL--QSGTVWVNCYSVV--SAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI  489 (494)
T ss_dssp             HHHHS--CCSEEEESCCCCC--CTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred             HHHhC--CEeEEEEcCCCCc--CCCCCcCccccccCChhhHHHHHHHhcceEEEEEec
Confidence            99986  9999999987553  46899999    778999999999999999998774

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=1.7e-30  Score=216.49  Aligned_cols=127  Identities=35%  Similarity=0.681  Sum_probs=113.8

Q ss_pred             EEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHH
Q psy1961           3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRC   82 (147)
Q Consensus         3 ~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~   82 (147)
                      ++++||...+..|+|++||||.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.++
T Consensus       384 a~v~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~d--~eeai~~a-n~~~~gL~a~i~s~d~~~~~~~  460 (516)
T d1uzba_         384 QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKD--FAEALEVA-NDTPYGLTGGVYSRKREHLEWA  460 (516)
T ss_dssp             EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESS--HHHHHHHH-HCSSCCSEEEEECSCHHHHHHH
T ss_pred             CEEECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeCC--HHHHHHHH-HCCCCCCEEEEEcCCHHHHHHH
Confidence            45667766555789999999999999999999999999999999998  79999999 9999999999999999999999


Q ss_pred             HhhccCceeEEEEcCCCCCCCCCCccccC----cCCCC-ChHHHHhhcceeceEEEe
Q psy1961          83 LDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKA-GGPHYVLRWATPQSIKET  134 (147)
Q Consensus        83 ~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~-~g~~~~~~f~~~k~v~~~  134 (147)
                      ++++  ++|+|+||+..++...+.+||||    |.|+. |+.+++++|++.|+|+.+
T Consensus       461 ~~~l--~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~~k~v~~r  515 (516)
T d1uzba_         461 RREF--HVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER  515 (516)
T ss_dssp             HHHS--CCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred             HHhC--CEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhCCeeeEEEc
Confidence            9986  99999999987766567899999    66766 568999999999999865

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.1e-30  Score=215.35  Aligned_cols=125  Identities=21%  Similarity=0.400  Sum_probs=114.5

Q ss_pred             EEEECCcccCCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHH
Q psy1961           3 EIIGGGQYDESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRC   82 (147)
Q Consensus         3 ~v~~GG~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~   82 (147)
                      +++.|+......|+|++|||+.+++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.++
T Consensus       345 ~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~--~deai~~a-n~~~~GL~a~i~t~d~~~~~~~  421 (474)
T d1wnda_         345 KVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDN--EEQVVNWA-NDSQYGLASSVWTKDVGRAHRV  421 (474)
T ss_dssp             EEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECC--HHHHHHHH-HSSSCCSEEEEECSBHHHHHHH
T ss_pred             EEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCC--HHHHHHHH-hCCCCCCeEEEEeCCHHHHHHH
Confidence            56677776666889999999999999999999999999999999998  79999999 9999999999999999999999


Q ss_pred             HhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          83 LDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        83 ~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      ++++  ++|.|+||+....  .+.+||||    |.|+++|.+++++||+.|+|+++
T Consensus       422 ~~~l--~~g~v~iN~~~~~--~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~  473 (474)
T d1wnda_         422 SARL--QYGCTWVNTHFML--VSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK  473 (474)
T ss_dssp             HHHC--CSSEEEESCCCCC--CTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred             HHhC--CccEEEEeCCCCc--cCCCCcccccccccCccCHHHHHHHcCCEEEEEEe
Confidence            9986  9999999998653  46899999    67899999999999999999865

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

Probab=99.97  E-value=1.6e-30  Score=216.16  Aligned_cols=127  Identities=27%  Similarity=0.485  Sum_probs=115.6

Q ss_pred             eEEEECCccc------CCCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCC
Q psy1961           2 SEIIGGGQYD------ESCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAED   75 (147)
Q Consensus         2 a~v~~GG~~~------~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d   75 (147)
                      |++++||...      ...|+|++||||.+++++|++++||+||||++|++|++  +||||+++ |+++|||++||||+|
T Consensus       360 a~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~--~~eai~~a-n~~~~gL~~~i~t~d  436 (503)
T d1a4sa_         360 ARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDT--EEEVLQRA-NNTTFGLASGVFTRD  436 (503)
T ss_dssp             CEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECC--HHHHHHHH-HCSSCCSEEEEECSB
T ss_pred             CEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCC--HHHHHHHH-hCCCCCCeEEEEcCC
Confidence            6899999642      24689999999999999999999999999999999998  69999999 999999999999999


Q ss_pred             HHHHHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEec
Q psy1961          76 ESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETF  135 (147)
Q Consensus        76 ~~~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~  135 (147)
                      .+++.++++.+  ++|.|+||+...+.  +.+||||    |.|+++|.+++++|++.|+|++++
T Consensus       437 ~~~~~~~~~~l--~~G~v~iN~~~~~~--~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~  496 (503)
T d1a4sa_         437 ISRAHRVAANL--EAGTCYINTYSISP--VEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM  496 (503)
T ss_dssp             HHHHHHHHHHS--CSSEEEESCCCCCC--TTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred             HHHHHHHHHhC--CeeEEEEeCCCCCC--CCCCccCcccCcCCcchHHHHHHHhhCeEEEEEcC
Confidence            99999999986  99999999977643  5799999    788999999999999999998773

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

Probab=99.94  E-value=2.2e-27  Score=194.97  Aligned_cols=116  Identities=23%  Similarity=0.335  Sum_probs=107.4

Q ss_pred             CCCceEecEEEEeCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHHHhhccCceeE
Q psy1961          13 SCGYFIQPTIVQTKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGN   92 (147)
Q Consensus        13 ~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~~~~~~~~~G~   92 (147)
                      ..|+|++|||+..++++|++++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+.+.++++.+  ++|.
T Consensus       353 ~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~--~deai~~~-n~~~~glta~v~s~d~~~~~~~~~~l--~~g~  427 (474)
T d1euha_         353 REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTS--VEEAIEIS-NKSEYGLQASIFTNDFPRAFGIAEQL--EVGT  427 (474)
T ss_dssp             EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESC--HHHHHHHH-HHSSEESEEEEECSCHHHHHHHHHHS--CSSE
T ss_pred             CCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCC--HHHHHHHH-HCCCCCCeEEEEeCCHHHHHHHHHhC--CEEE
Confidence            4689999999999999999999999999999999998  79999999 99999999999999999999999986  9999


Q ss_pred             EEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEe
Q psy1961          93 YYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKET  134 (147)
Q Consensus        93 v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~  134 (147)
                      |+||+.+.+. .+.+||||    |.|+.+|++++++|++.|+|+++
T Consensus       428 v~iN~~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~  472 (474)
T d1euha_         428 VHINNKTQRG-TDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD  472 (474)
T ss_dssp             EEESSCCCCC-STTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred             EEEECCCCCC-CCCCCccccccCccCccCHHHHHHHhCcEEEEEEe
Confidence            9999976543 56899999    67889999999999999999754

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=99.94  E-value=6.1e-28  Score=200.01  Aligned_cols=135  Identities=28%  Similarity=0.473  Sum_probs=117.2

Q ss_pred             eEEEECCcccCCCCceEecEEEE---eCCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQ---TKDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESF   78 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~---~v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~   78 (147)
                      |++++||.....  .+..++++.   ++..||++++||+||||++|++|+|  .|||++++ |+++|||+++|||+|.++
T Consensus       358 a~v~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~--~~eai~~~-n~~~~gLt~sv~s~d~~~  432 (499)
T d1ky8a_         358 GRVLAGGRRLGP--TYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKD--LDQAIELA-NGRPYGLDAAVFGRDVVK  432 (499)
T ss_dssp             CEEEECCCEEET--TEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESS--HHHHHHHH-HTSSEESEEEEECCCHHH
T ss_pred             CEEeeeeccccc--cccccccccccccCCCCChhhhccccCceEEEEEcCC--HHHHHHHH-hCCCCCCeEEEEcCCHHH
Confidence            678888876432  344455443   4567899999999999999999998  79999999 999999999999999999


Q ss_pred             HHHHHhhccCceeEEEEcCCCCCCCCCCccccC----cCCCCChHHHHhhcceeceEEEecCCCCcCCCC
Q psy1961          79 QKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG----TNDKAGGPHYVLRWATPQSIKETFVPLTEWKYP  144 (147)
Q Consensus        79 ~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG----~~g~~~g~~~~~~f~~~k~v~~~~~~~~~~~~p  144 (147)
                      +.++++.+  ++|+|+||+...+. .+.+||||    |.|+.+|.+++++|++.|+|++++.+...|||.
T Consensus       433 ~~~~~~~l--~~G~v~iN~~~~~~-~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~~~~~~~~~y~  499 (499)
T d1ky8a_         433 IRRAVRLL--EVGAIYINDMPRHG-IGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVFNYKGKGVWKYE  499 (499)
T ss_dssp             HHHHHHHC--CSSEEEETSCCCCT-TSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEEECTTSSSCSCC
T ss_pred             HHHHHHhC--CEeEEEEeCCCCCC-CCCCCccccccCcCCCCCHHHHHHHhhCEEEEEEcCCCCCCCCCC
Confidence            99999986  89999999987764 57899999    678899999999999999999998888899984

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

Probab=99.85  E-value=1.9e-21  Score=161.10  Aligned_cols=123  Identities=20%  Similarity=0.258  Sum_probs=91.5

Q ss_pred             eEEEECCcccCCCCceEecEEEEe---CCCCCcccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcC--CH
Q psy1961           2 SEIIGGGQYDESCGYFIQPTIVQT---KDPLEKIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAE--DE   76 (147)
Q Consensus         2 a~v~~GG~~~~~~g~~~~Ptvl~~---v~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~--d~   76 (147)
                      +++++||..    +.+..|+++..   +..++++++||+||||++|++|+|  +||||+++ |+++|||+++|||+  |.
T Consensus       340 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~--~~eai~~a-n~~~~gL~a~I~t~d~d~  412 (504)
T d1ez0a_         340 IDVTFSQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCEN--VADMLSLS-EMLAGSLTATIHATEEDY  412 (504)
T ss_dssp             EEEEECCCC----TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESS--HHHHHHHH-HTCCCEEEEEEECCGGGH
T ss_pred             hhccccccc----ccccCCccccccccccccchhhcccccCCeeeeeecCC--HHHHHHHH-HCCCCCceEEEEecchhH
Confidence            345566542    34455555543   334688999999999999999998  79999999 99999999999996  55


Q ss_pred             HHHHHHHhhccCceeEEEEcCCCCCCC-CCCc----cccC---cCCCCChHHHHhhcceeceE
Q psy1961          77 SFQKRCLDDLKYAAGNYYINDKSTGSV-VGQQ----PFGG---TNDKAGGPHYVLRWATPQSI  131 (147)
Q Consensus        77 ~~~~~~~~~~~~~~G~v~iN~~~~~~~-~~~~----pfGG---~~g~~~g~~~~~~f~~~k~v  131 (147)
                      .++.++++.++..+|+|+||+.+++.. ...+    ||||   +++++.|.+++++|+++.++
T Consensus       413 ~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~~~G~~~i~~f~r~v~~  475 (504)
T d1ez0a_         413 PQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAY  475 (504)
T ss_dssp             HHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEE
T ss_pred             HHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCCcchHHHHHHHhchhhh
Confidence            678888888744599999999766532 2234    5555   22345689999999987443

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.84  E-value=8.2e-22  Score=159.30  Aligned_cols=99  Identities=17%  Similarity=0.239  Sum_probs=82.8

Q ss_pred             cccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHHHhhccCceeEEEEcCCCCCCCCCCcccc
Q psy1961          31 KIMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFG  110 (147)
Q Consensus        31 ~i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfG  110 (147)
                      ..++||+||||++|++|+|  +||||+++ |+++|||+++|||+|.+++.++++++  ++|.|+||+.+........|||
T Consensus       304 ~~~~~E~FgPvl~v~~~~~--~dEAI~~a-N~~~yGLsa~I~T~d~~~a~~~~~~i--~~G~V~IN~~~~~~~~~~~g~g  378 (414)
T d1o20a_         304 DDWPTEYLDLIIAIKVVKN--VDEAIEHI-KKYSTGHSESILTENYSNAKKFVSEI--DAAAVYVNASTRFTDGGQFGFG  378 (414)
T ss_dssp             GGTTCCCCSSEEEEEEESS--HHHHHHHH-HHHCCSSEEEEECSCHHHHHHHHHHC--CSSEEEESSCGGGCSTTTTTCS
T ss_pred             ccCCceeeeeEEEEEEeCC--HHHHHHHH-hcCCCCCcEEEEeCCHHHHHHHHHhC--CeeEEEEeCCCcCCCCCCCCCC
Confidence            4678999999999999998  79999999 99999999999999999999999986  9999999997654333345666


Q ss_pred             C--c--CCCC--ChHHHHhhcceeceEEEe
Q psy1961         111 G--T--NDKA--GGPHYVLRWATPQSIKET  134 (147)
Q Consensus       111 G--~--~g~~--~g~~~~~~f~~~k~v~~~  134 (147)
                      |  |  +++.  +|++++++|++.|+|...
T Consensus       379 ~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~  408 (414)
T d1o20a_         379 AEIGISTQRFHARGPVGLRELTTYKFVVLG  408 (414)
T ss_dssp             CCSCEECSSSSCCEECCTGGGEEEEEEEEC
T ss_pred             CceeccCCCCCCCchhHHHHhCeEEEEEEC
Confidence            5  2  2232  378999999999998654

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.52  E-value=8.1e-15  Score=119.10  Aligned_cols=96  Identities=15%  Similarity=0.136  Sum_probs=66.7

Q ss_pred             ccccccccceEEEEEcCCCCHHHHHHHHhhCCCCccEEEEEcCCHHHHHHHHhhccCceeEEEEcCCCCCCCCCCccccC
Q psy1961          32 IMTEEIFGPVLTIFVYPDKDLDKTLKIVTDSTPYALTGAVFAEDESFQKRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG  111 (147)
Q Consensus        32 i~~eE~FGPvl~v~~~~~~~~~eai~~a~n~~~~gL~~~vft~d~~~~~~~~~~~~~~~G~v~iN~~~~~~~~~~~pfGG  111 (147)
                      -+.+|.|+||+.|.+|++  +||||+++ |...+|++++|||+|.+.+.++++.+  ++|.|+||.++.......+.||+
T Consensus       325 d~~~E~l~pvl~v~~v~~--~eEAI~~i-n~~g~ghta~I~T~d~~~a~~F~~~v--da~~V~vNasTrf~Dg~~~g~g~  399 (436)
T d1vlua_         325 DFDKEFLSLDLAAKFVTS--TESAIQHI-NTHSSRHTDAIVTENKANAEKFMKGV--DSSGVYWNASTRFADGFRYGFGA  399 (436)
T ss_dssp             -------CCCCEEEECCS--HHHHHHHH-TTSCSSCEEEEECSCHHHHHHHHHHC--CCSEEEESSCGGGCC--------
T ss_pred             chhhhhhCcceeEEEECC--HHHHHHHH-HHhCCCCceEEEECCHHHHHHHHHhC--CceEEEEcCCCccCCCCcccCcc
Confidence            378999999999999998  79999999 99999999999999999999999986  99999999987543222344444


Q ss_pred             --cC--CC--CChHHHHhhcceeceEE
Q psy1961         112 --TN--DK--AGGPHYVLRWATPQSIK  132 (147)
Q Consensus       112 --~~--g~--~~g~~~~~~f~~~k~v~  132 (147)
                        |.  ++  ..|+-+++..|..|++.
T Consensus       400 e~Gist~k~h~rGp~gl~~ltt~k~~~  426 (436)
T d1vlua_         400 EVGISTSKIHARGPVGLDGLVSYQYQI  426 (436)
T ss_dssp             --------------CCSGGGEEEEEEE
T ss_pred             eeeEecCCCCCCCCcChHHhceEEEEE
Confidence              22  22  35777889999988875