Psyllid ID: psy1991

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360------
Protein Sequence
MMMCTQKLNSIGIQHCSIKHKQAHSSQFSSTLPTCLGLDKCPFPYILFCFLCCPQVWHDIETVMSGEGPPVFIDYTAASDLVQDIIPNVESSTSNTPVSNYYIDFNTSNNYKNKPPDQIVPNLLYSEIKKYEDVYKNEPLSAFVEYSVKSENSSNLSDEHKQTLSCNYNQYPSQHSIDSSSVNNYSSLYLSPVTPSNPEFYPENYQYHHYRDDYSLDIKYQPEYEHYRVNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH
Secondary Structure (PSIPRED)
ccccccccccccEEccccccccccccccccccccccccccccccEEEEEEEccccccHHHHHHHcccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccEEccHHHHHHHHccccccccEEcccccccccccccHHHccccccccccccccccccccccccHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccccEEEcccccccEEccccccccccccccccccEEEccccccccccEEEEEEEEccccccccEEEEcccccccccccEEEEEEcccccccEEEEEEccccccccccccccccccccccHHHEHccccccccccccccccccEccccHHHHHccccccccccccccccccccEccccHHHEHccccccccccccccccccEccccHHHHHcHcccccccccccHccccEccccHHHEHEEccccccccccccccccccccHHHccccEcccccccEcEccccccccEEccHHHHHHHHHHccccccEEccccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHH
Coil and Loop (DISEMBL)
mmmctqklnsigiqhcsikhkqahssqfsstlptclgldkcpfpyilfcflccpqvwhdietvmsgegppvfiDYTAASDlvqdiipnvesstsntpvsnyyidfntsnnyknkppdqivpnLLYSEIKKYEdvykneplsAFVEYSVksenssnlsdehkqtlscnynqypsqhsidsssvnnysslylspvtpsnpefypenyqyhhyrddysldikyqpeyehyrvnssshgnynklhihpyyqthhhtqifqtpsitikssllskpkrrqnWSRRKIIMHtcshngcgktytksshLKAHLrthtgekpyqcgwkgcgwkfarsDELTRHFrkhtgdrpfqctlcerafsrsdhlslhmkrh
Flexible Loop (DISEMBL)
MMMCTQKLNSIGIQHCSIKHKQAHSSQFSSTLPTCLGLDKCPFPYILFCFLCCPQVWHDIETVMSGEGPPVFIDYTAASDLVQDIIPnvesstsntpvSNYYIDFNtsnnyknkppdQIVPNLLYSEIKKYEDVYKNEPLSAFVEYSVKSENSSNLSDEHKQTLSCNYNQYPSQHSIDSSSVNNYSSLYLSPVTPSNPEFYPENYQYHHYRDDYSLDIKYQPEYEHYRVNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRthtgekpyqcgwkgcGWKFARSDELTRHFrkhtgdrpfqctlcerafsrsdhlslhmkrh
Low Complexity Region (SEG)
MMMCTQKLNSIGIQHCSIKHKQAHSSQFSSTLPTCLGLDKCPFPYILFCFLCCPQVWHDIETVMSGEGPPVFIDYTAASDLVQDIIPNVESSTSNTPVSNYYIDFNTSNNYKNKPPDQIVPNLLYSEIKKYEDVYKNEPLSAFVEYSVKSENSSNLSDEHKQTLSCNYNQYPSQHSIDsssvnnysslylsPVTPSNPEFYPENYQYHHYRDDYSLDIKYQPEYEHYRVNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH
Disordered region (IsUnstruct)
*********SIGIQHCSIK********FSSTLPTCLGLDKCPFPYILFCFLCCPQVWHDIETVMSGEGPPVFIDYTAASDLVQDIIPNVE*****TPVSNYYIDFNTSNNYKNKPPDQIVPNLLYSEIKKYEDVYKNEPLSAFVEY*****************************************LYLS*V****PEFYPENYQYHHYRDDYSLDIKYQPEYEHYRVNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSL********NWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAF*************
Disordered Region (DISOPRED)
********NSIGIQHCSI***********STLPTCLGLDKCPFPYILFCFLCCPQVWHDIETVMSGEG************************************************************************************************************************************************************************************************************************TCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHM***
Disordered Region (DISEMBL)
MMMCTQKLNSIGIQHCSI************TLPTCLGLDKCPFPYILFCFLCCPQVWHDIETVMSGEGPPVFIDYTAASDLVQDIIPNVESSTSNTPVSNYYIDFNTSNNYKNKPPDQIVPNLLYSEIKKYEDVYKNEPLSAFVEYS**************QTLSCNYNQYPSQHSIDSSSVNNYSSLYLSPVTPSNPEFYPENYQYHHYRDDYSLDIKYQPEYEHYRVNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRS**********
Disordered Region (DISPRO)
*****QKLNSIGIQHCSIKHKQAHSSQFSSTLPTCLGLDKCPFPYILFCFLCCPQVWHDIETVMSGEGPPVFIDYTAASDLVQDIIPNVESSTSNTPVSNYYIDFNTSNNYKNKPPDQIVPNLLYSEIKKYEDVYKNEPLSAFVEYSVKSENSSNLSDEHKQTLSCNYNQYPSQHSIDSSSVNNYSSLYLSPVTPSNPEFYPENYQYHHYRDDYSLDIKYQPEYEHYRVNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKR*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMMCTQKLNSIGIQHCSIKHKQAHSSQFSSTLPTCLGLDKCPFPYILFCFLCCPQVWHDIETVMSGEGPPVFIDYTAASDLVQDIIPNVESSTSNTPVSNYYIDFNTSNNYKNKPPDQIVPNLLYSEIKKYEDVYKNEPLSAFVEYSVKSENSSNLSDEHKQTLSCNYNQYPSQHSIDSSSVNNYSSLYLSPVTPSNPEFYPENYQYHHYRDDYSLDIKYQPEYEHYRVNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	366	2.2.26 [Sep-21-2011]
Q9Y5W3	355	Krueppel-like factor 2 OS	yes	N/A	0.300	0.309	0.747	1e-44
Q60843	354	Krueppel-like factor 2 OS	yes	N/A	0.314	0.324	0.715	3e-44
Q9ET58	351	Krueppel-like factor 2 OS	yes	N/A	0.314	0.327	0.715	6e-44
Q60793	483	Krueppel-like factor 4 OS	no	N/A	0.267	0.202	0.787	2e-43
O43474	513	Krueppel-like factor 4 OS	no	N/A	0.267	0.191	0.787	2e-43
Q13351	362	Krueppel-like factor 1 OS	no	N/A	0.262	0.265	0.760	7e-43
Q9Z0Z7	446	Krueppel-like factor 5 OS	no	N/A	0.259	0.213	0.726	2e-39
P46099	358	Krueppel-like factor 1 OS	no	N/A	0.270	0.276	0.72	5e-39
Q13887	457	Krueppel-like factor 5 OS	no	N/A	0.259	0.207	0.715	5e-38
P57682	345	Krueppel-like factor 3 OS	no	N/A	0.295	0.313	0.633	6e-37

>sp|Q9Y5W3|KLF2_HUMAN Krueppel-like factor 2 OS=Homo sapiens GN=KLF2 PE=1 SV=2

 Score =  180 bits (457), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 83/111 (74%), Positives = 93/111 (83%), Gaps = 1/111 (0%)

Query: 257 TPSITIKSSLLSKPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQ 315
           TP  +    L +KPKR R++W R++   HTCS+ GCGKTYTKSSHLKAHLRTHTGEKPY 
Sbjct: 244 TPPASPLELLEAKPKRGRRSWPRKRTATHTCSYAGCGKTYTKSSHLKAHLRTHTGEKPYH 303

Query: 316 CGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           C W GCGWKFARSDELTRH+RKHTG RPFQC LC+RAFSRSDHL+LHMKRH
Sbjct: 304 CNWDGCGWKFARSDELTRHYRKHTGHRPFQCHLCDRAFSRSDHLALHMKRH 354

Binds to the CACCC box in the beta-globin gene promoter and activates transcription.
Homo sapiens (taxid: 9606)

>sp|Q60843|KLF2_MOUSE Krueppel-like factor 2 OS=Mus musculus GN=Klf2 PE=1 SV=2

 Score =  179 bits (454), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 83/116 (71%), Positives = 95/116 (81%), Gaps = 1/116 (0%)

Query: 252 TQIFQTPSITIKSSLLSKPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTG 310
           T+   TP  +    L +KPKR R++W R++   HTCS+  CGKTYTKSSHLKAHLRTHTG
Sbjct: 238 TRGLLTPPSSPLELLEAKPKRGRRSWPRKRAATHTCSYTNCGKTYTKSSHLKAHLRTHTG 297

Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           EKPY C W+GCGWKFARSDELTRH+RKHTG RPFQC LC+RAFSRSDHL+LHMKRH
Sbjct: 298 EKPYHCNWEGCGWKFARSDELTRHYRKHTGHRPFQCHLCDRAFSRSDHLALHMKRH 353

Binds to the CACCC box in the beta-globin gene promoter and activates transcription.

Mus musculus (taxid: 10090)

>sp|Q9ET58|KLF2_RAT Krueppel-like factor 2 OS=Rattus norvegicus GN=Klf2 PE=3 SV=1

 Score =  178 bits (452), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 83/116 (71%), Positives = 94/116 (81%), Gaps = 1/116 (0%)

Query: 252 TQIFQTPSITIKSSLLSKPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTG 310
           T+   TP  +    L +KPKR R++W R++   HTCS+  CGKTYTKSSHLKAHLRTHTG
Sbjct: 235 TRGLLTPPSSPLELLEAKPKRGRRSWPRKRAATHTCSYTNCGKTYTKSSHLKAHLRTHTG 294

Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           EKPY C W GCGWKFARSDELTRH+RKHTG RPFQC LC+RAFSRSDHL+LHMKRH
Sbjct: 295 EKPYHCNWDGCGWKFARSDELTRHYRKHTGHRPFQCHLCDRAFSRSDHLALHMKRH 350

Binds to the CACCC box in the beta-globin gene promoter and activates transcription.

Rattus norvegicus (taxid: 10116)

>sp|Q60793|KLF4_MOUSE Krueppel-like factor 4 OS=Mus musculus GN=Klf4 PE=1 SV=3

 Score =  177 bits (448), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 78/99 (78%), Positives = 86/99 (86%), Gaps = 1/99 (1%)

Query: 269 KPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFAR 327
           KPKR R++W R++   HTC + GCGKTYTKSSHLKAHLRTHTGEKPY C W GCGWKFAR
Sbjct: 384 KPKRGRRSWPRKRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFAR 443

Query: 328 SDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           SDELTRH+RKHTG RPFQC  C+RAFSRSDHL+LHMKRH
Sbjct: 444 SDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 482

Transcription factor; can act both as activator and as repressor. Binds the 5'-CACCC-3' core sequence. Binds to the promoter region of its own gene and can activate its own transcription. Regulates the expression of key transcription factors during embryonic development. Plays an important role in maintaining embryonic stem cells, and in preventing their differentiation. Required for establishing the barrier function of the skin and for postnatal maturation and maintenance of the ocular surface. Involved in the differentiation of epithelial cells and may also function in skeletal and kidney development. Contributes to the down-regulation of p53/TP53 transcription.

Mus musculus (taxid: 10090)

>sp|O43474|KLF4_HUMAN Krueppel-like factor 4 OS=Homo sapiens GN=KLF4 PE=1 SV=3

 Score =  176 bits (446), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 78/99 (78%), Positives = 86/99 (86%), Gaps = 1/99 (1%)

Query: 269 KPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFAR 327
           KPKR R++W R++   HTC + GCGKTYTKSSHLKAHLRTHTGEKPY C W GCGWKFAR
Sbjct: 414 KPKRGRRSWPRKRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFAR 473

Query: 328 SDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           SDELTRH+RKHTG RPFQC  C+RAFSRSDHL+LHMKRH
Sbjct: 474 SDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 512

Transcription factor; can act both as activator and as repressor. Binds the 5'-CACCC-3' core sequence. Binds to the promoter region of its own gene and can activate its own transcription. Regulates the expression of key transcription factors during embryonic development. Plays an important role in maintaining embryonic stem cells, and in preventing their differentiation. Required for establishing the barrier function of the skin and for postnatal maturation and maintenance of the ocular surface. Involved in the differentiation of epithelial cells and may also function in skeletal and kidney development. Contributes to the down-regulation of p53/TP53 transcription.

Homo sapiens (taxid: 9606)

>sp|Q13351|KLF1_HUMAN Krueppel-like factor 1 OS=Homo sapiens GN=KLF1 PE=1 SV=1

 Score =  174 bits (442), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 73/96 (76%), Positives = 86/96 (89%)

Query: 271 KRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDE 330
           + R++W+R++   HTC+H GCGK+YTKSSHLKAHLRTHTGEKPY C W+GCGW+FARSDE
Sbjct: 266 RGRRSWARKRQAAHTCAHPGCGKSYTKSSHLKAHLRTHTGEKPYACTWEGCGWRFARSDE 325

Query: 331 LTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           LTRH+RKHTG RPF+C LC RAFSRSDHL+LHMKRH
Sbjct: 326 LTRHYRKHTGQRPFRCQLCPRAFSRSDHLALHMKRH 361

Transcription regulator of erythrocyte development that probably serves as a general switch factor during erythropoiesis. Is a dual regulator of fetal-to-adult globin switching. Binds to the CACCC box in the beta-globin gene promoter and acts as a preferential activator of this gene. Furthermore, it binds to the BCL11A promoter and activates expression of BCL11A, which in turn represses the HBG1 and HBG2 genes. This dual activity ensures that, in most adults, fetal hemoglobin levels are low. Able to activate CD44 and AQP1 promoters. When sumoylated, acts as a transcriptional repressor by promoting interaction with CDH2/MI2beta and also represses megakaryocytic differentiation.

Homo sapiens (taxid: 9606)

>sp|Q9Z0Z7|KLF5_MOUSE Krueppel-like factor 5 OS=Mus musculus GN=Klf5 PE=2 SV=2

 Score =  163 bits (412), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 69/95 (72%), Positives = 80/95 (84%)

Query: 272 RRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDEL 331
           RR N    K  +H C +NGC K YTKSSHLKAHLRTHTGEKPY+C W+GC W+FARSDEL
Sbjct: 350 RRSNPDLEKRRIHFCDYNGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDEL 409

Query: 332 TRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           TRH+RKHTG +PFQC +C+R+FSRSDHL+LHMKRH
Sbjct: 410 TRHYRKHTGAKPFQCMVCQRSFSRSDHLALHMKRH 444

Transcription factor that binds to GC box promoter elements. Activates the transcription of these genes.

Mus musculus (taxid: 10090)

>sp|P46099|KLF1_MOUSE Krueppel-like factor 1 OS=Mus musculus GN=Klf1 PE=1 SV=2

 Score =  162 bits (409), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 72/100 (72%), Positives = 82/100 (82%), Gaps = 1/100 (1%)

Query: 268 SKPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFA 326
           + PKR R+  + ++   HTC H GCGK+Y+KSSHLKAHLRTHTGEKPY C W GC W+FA
Sbjct: 258 APPKRSRRTLAPKRQAAHTCGHEGCGKSYSKSSHLKAHLRTHTGEKPYACSWDGCDWRFA 317

Query: 327 RSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           RSDELTRH+RKHTG RPF C LC RAFSRSDHL+LHMKRH
Sbjct: 318 RSDELTRHYRKHTGHRPFCCGLCPRAFSRSDHLALHMKRH 357

Transcription regulator of erythrocyte development. Binds to the CACCC box in the beta-globin gene promoter and activates transcription. Probably serves as a general switch factor for erythroid development. When sumoylated, acts as a transcriptional repressor by promoting interaction with CDH2/MI2beta and also represses megakaryocytic differentiation.

Mus musculus (taxid: 10090)

>sp|Q13887|KLF5_HUMAN Krueppel-like factor 5 OS=Homo sapiens GN=KLF5 PE=1 SV=2

 Score =  158 bits (400), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 68/95 (71%), Positives = 78/95 (82%)

Query: 272 RRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDEL 331
           RR N    K  +H C + GC K YTKSSHLKAHLRTHTGEKPY+C W+GC W+FARSDEL
Sbjct: 361 RRSNPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDEL 420

Query: 332 TRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           TRH+RKHTG +PFQC +C R+FSRSDHL+LHMKRH
Sbjct: 421 TRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 455

Transcription factor that binds to GC box promoter elements. Activates the transcription of these genes.

Homo sapiens (taxid: 9606)

>sp|P57682|KLF3_HUMAN Krueppel-like factor 3 OS=Homo sapiens GN=KLF3 PE=1 SV=1

 Score =  155 bits (391), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 69/109 (63%), Positives = 83/109 (76%), Gaps = 1/109 (0%)

Query: 258 PSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCG 317
           PS+ ++      P    +  R++ I H C ++GC K YTKSSHLKAH RTHTGEKPY+C 
Sbjct: 235 PSVIVQPGKRPLPVESPDTQRKRRI-HRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCT 293

Query: 318 WKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           W+GC WKFARSDELTRHFRKHTG +PFQC  C+R+FSRSDHL+LH KRH
Sbjct: 294 WEGCTWKFARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRH 342

Binds to the CACCC box of erythroid cell-expressed genes. May play a role in hematopoiesis.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	366
242009535	354	Early growth response protein, putative	0.344	0.355	0.730	1e-45
348522040	386	PREDICTED: Krueppel-like factor 2-like [	0.368	0.349	0.640	2e-44
161511587	389	KLF2/4 [Paracentrotus lividus]	0.314	0.295	0.713	2e-44
269784847	356	KLF2-like transcription factor [Saccoglo	0.284	0.292	0.798	2e-44
405974536	416	Krueppel-like factor 1 [Crassostrea giga	0.297	0.262	0.763	3e-44
50761170	380	PREDICTED: Krueppel-like factor 2 [Gallu	0.606	0.584	0.447	4e-44
432917336	382	PREDICTED: Krueppel-like factor 2-like [	0.311	0.298	0.739	4e-44
321469145	368	hypothetical protein DAPPUDRAFT_243802 [	0.303	0.301	0.758	5e-44
348522602	413	PREDICTED: Krueppel-like factor 2-like [	0.311	0.276	0.721	6e-44
226443178	410	Krueppel-like factor 2 [Salmo salar] gi|	0.311	0.278	0.730	1e-43

>gi|242009535|ref|XP_002425539.1| Early growth response protein, putative [Pediculus humanus corporis] gi|212509414|gb|EEB12801.1| Early growth response protein, putative [Pediculus humanus corporis]

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 95/130 (73%), Positives = 108/130 (83%), Gaps = 4/130 (3%)

Query: 237 YNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYT 296
           +   H+H    TH H  + + P    +  + +KP+RR+NWSRRK+I+HTC+H GCGKTYT
Sbjct: 226 FPGTHVH----THPHISLPRPPPGLTEQPVPAKPRRRRNWSRRKVIVHTCTHPGCGKTYT 281

Query: 297 KSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRS 356
           KSSHLKAHLRTHTGEKPYQCGWKGC WKFARSDELTRH+RKHTGDRPFQC LCERAFSRS
Sbjct: 282 KSSHLKAHLRTHTGEKPYQCGWKGCSWKFARSDELTRHYRKHTGDRPFQCRLCERAFSRS 341

Query: 357 DHLSLHMKRH 366
           DHLSLHMKRH
Sbjct: 342 DHLSLHMKRH 351

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|348522040|ref|XP_003448534.1| PREDICTED: Krueppel-like factor 2-like [Oreochromis niloticus]

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 91/142 (64%), Positives = 104/142 (73%), Gaps = 7/142 (4%)

Query: 227 YRVNSSSHGNYNK-LHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKR-RQNWSRRKIIMH 284
           Y    +  G Y++ L + P  Q     ++  TP  +    L SKPKR R+ W R++   H
Sbjct: 249 YHAPHAGFGMYDEGLSLQPGAQ-----RVMLTPPSSPLELLESKPKRGRRTWPRKRTATH 303

Query: 285 TCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF 344
           TC+  GCGKTYTKSSHLKAHLRTHTGEKPY C W+GCGWKFARSDELTRHFRKHTG RPF
Sbjct: 304 TCTFAGCGKTYTKSSHLKAHLRTHTGEKPYHCSWEGCGWKFARSDELTRHFRKHTGHRPF 363

Query: 345 QCTLCERAFSRSDHLSLHMKRH 366
           QC LCERAFSRSDHL+LHMKRH
Sbjct: 364 QCHLCERAFSRSDHLALHMKRH 385

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|161511587|gb|ABX71820.1| KLF2/4 [Paracentrotus lividus]

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/115 (71%), Positives = 94/115 (81%)

Query: 252 TQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGE 311
           T +  T   ++ ++ + + K R+ W R++   HTCS  GCGKTYTKSSHLKAH+RTHTGE
Sbjct: 274 TPVDSTVPTSVPATQIVRRKGRRTWGRKRTTTHTCSRPGCGKTYTKSSHLKAHMRTHTGE 333

Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           KPY C WKGCGWKFARSDELTRH+RKHTGDRPFQC LCERAFSRSDHLSLHMKRH
Sbjct: 334 KPYHCNWKGCGWKFARSDELTRHYRKHTGDRPFQCHLCERAFSRSDHLSLHMKRH 388

Source: Paracentrotus lividus

Species: Paracentrotus lividus

Genus: Paracentrotus

Family: Echinidae

Order: Echinoida

Class: Echinoidea

Phylum: Echinodermata

Superkingdom: Eukaryota

>gi|269784847|ref|NP_001161575.1| KLF2-like transcription factor [Saccoglossus kowalevskii] gi|268054143|gb|ACY92558.1| KLF2-like transcription factor [Saccoglossus kowalevskii]

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 83/104 (79%), Positives = 90/104 (86%)

Query: 263 KSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCG 322
           +S   SK K R++W R++   HTC+H GC KTYTKSSHLKAHLRTHTGEKPY C WKGCG
Sbjct: 252 QSQQTSKRKGRRSWGRKRTASHTCTHPGCIKTYTKSSHLKAHLRTHTGEKPYHCNWKGCG 311

Query: 323 WKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           WKFARSDELTRH+RKHTGDRPFQC LCERAFSRSDHLSLHMKRH
Sbjct: 312 WKFARSDELTRHYRKHTGDRPFQCHLCERAFSRSDHLSLHMKRH 355

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|405974536|gb|EKC39171.1| Krueppel-like factor 1 [Crassostrea gigas]

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 84/110 (76%), Positives = 91/110 (82%), Gaps = 1/110 (0%)

Query: 258 PSITIKSSLLSKPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           P  T+ S+     KR R+ W R++   HTC+H GC KTYTKSSHLKAHLRTHTGEKPY C
Sbjct: 306 PPPTVDSTAAQPKKRGRRTWGRKRQTSHTCTHPGCNKTYTKSSHLKAHLRTHTGEKPYAC 365

Query: 317 GWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
            WKGCGWKFARSDELTRH+RKHTGDRPFQC LCERAFSRSDHLSLHMKRH
Sbjct: 366 TWKGCGWKFARSDELTRHYRKHTGDRPFQCHLCERAFSRSDHLSLHMKRH 415

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|50761170|ref|XP_418264.1| PREDICTED: Krueppel-like factor 2 [Gallus gallus] gi|383465551|gb|AFH35133.1| Kruppel-like factor 2 [Gallus gallus]

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/248 (44%), Positives = 144/248 (58%), Gaps = 26/248 (10%)

Query: 128 IKKYEDVYKNEPLSAFVEYS---VKSENSSNLSDEHKQTLSCNYNQYPSQH----SIDSS 180
           IK   D+    P+   V  +   +K E S+     ++Q    N  Q P       S D  
Sbjct: 149 IKPEPDMDSYGPVLGLVPQACPKIKQEGSATCMMAYEQPRVANSPQIPGAETPPLSPDDL 208

Query: 181 SVNNYSSLYLSPVTPSNPEFYPENYQYHHYRDDYSLDIKYQPEYEHYRVNSSSHGNY-NK 239
            VN+  +  + P + S  + Y     +HH +      ++YQ        N+S +G + + 
Sbjct: 209 MVNDCHTQMMCPSSVSFQQSYHPPSGFHHPQ----THLQYQ--------NTSQYGLFEDS 256

Query: 240 LHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKR-RQNWSRRKIIMHTCSHNGCGKTYTKS 298
           L + P        +   TP  +    L SKPKR R++W R++   HTC++ GCGKTYTKS
Sbjct: 257 LPLQPSA-----PRGMLTPPSSPLELLDSKPKRGRRSWPRKRTATHTCTYAGCGKTYTKS 311

Query: 299 SHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDH 358
           SHLKAHLRTHTGEKPY C W+GCGWKFARSDELTRH+RKHTG RPFQC LC+RAFSRSDH
Sbjct: 312 SHLKAHLRTHTGEKPYHCNWEGCGWKFARSDELTRHYRKHTGHRPFQCHLCDRAFSRSDH 371

Query: 359 LSLHMKRH 366
           L+LHMKRH
Sbjct: 372 LALHMKRH 379

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432917336|ref|XP_004079514.1| PREDICTED: Krueppel-like factor 2-like [Oryzias latipes]

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 85/115 (73%), Positives = 94/115 (81%), Gaps = 1/115 (0%)

Query: 253 QIFQTPSITIKSSLLSKPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGE 311
           ++  TP  +    L SKPKR R+ W R++   HTC+  GCGKTYTKSSHLKAHLRTHTGE
Sbjct: 267 RVMLTPPSSPLELLESKPKRGRRTWPRKRTATHTCTFAGCGKTYTKSSHLKAHLRTHTGE 326

Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           KPY C W+GCGWKFARSDELTRHFRKHTG RPFQC LCERAFSRSDHL+LHMKRH
Sbjct: 327 KPYHCSWEGCGWKFARSDELTRHFRKHTGHRPFQCHLCERAFSRSDHLALHMKRH 381

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|321469145|gb|EFX80126.1| hypothetical protein DAPPUDRAFT_243802 [Daphnia pulex]

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 85/112 (75%), Positives = 92/112 (82%), Gaps = 1/112 (0%)

Query: 256 QTPSITIKSSLLSKPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPY 314
           QT S   ++    K KR R+ W R+K+  H CS  GC KTYTKSSHLKAHLRTHTGEKPY
Sbjct: 254 QTTSAGQQAGPSIKAKRGRKRWGRKKVTTHLCSFAGCAKTYTKSSHLKAHLRTHTGEKPY 313

Query: 315 QCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           QC WKGCGWKFARSDELTRH+RKHTGDRPFQC LCERAFSRSDHL+LHMKRH
Sbjct: 314 QCSWKGCGWKFARSDELTRHYRKHTGDRPFQCRLCERAFSRSDHLALHMKRH 365

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|348522602|ref|XP_003448813.1| PREDICTED: Krueppel-like factor 2-like [Oreochromis niloticus]

 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 83/115 (72%), Positives = 95/115 (82%), Gaps = 1/115 (0%)

Query: 253 QIFQTPSITIKSSLLSKPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGE 311
           ++  TP  +    + +KPKR R++W R++   HTC+  GCGKTYTKSSHLKAHLRTHTGE
Sbjct: 298 RVLLTPPSSPLDIMDTKPKRGRRSWPRKRTATHTCTFTGCGKTYTKSSHLKAHLRTHTGE 357

Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           KPY C W+GCGWKFARSDELTRHFRKHTG RPFQC LCERAFSRSDHL+LHMKRH
Sbjct: 358 KPYHCSWEGCGWKFARSDELTRHFRKHTGHRPFQCHLCERAFSRSDHLALHMKRH 412

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|226443178|ref|NP_001139825.1| Krueppel-like factor 2 [Salmo salar] gi|209150947|gb|ACI33051.1| Krueppel-like factor 2 [Salmo salar]

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 84/115 (73%), Positives = 94/115 (81%), Gaps = 1/115 (0%)

Query: 253 QIFQTPSITIKSSLLSKPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGE 311
           ++  TP  +    L SKPKR R+ W R++   HTC+  GCGKTYTKSSHLKAH RTHTGE
Sbjct: 295 RVLLTPPSSPLELLESKPKRGRRTWPRKRTATHTCTFAGCGKTYTKSSHLKAHHRTHTGE 354

Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           KPY CGW+GCGWKFARSDELTRHFRKHTG RPFQC LC+RAFSRSDHL+LHMKRH
Sbjct: 355 KPYNCGWEGCGWKFARSDELTRHFRKHTGHRPFQCHLCDRAFSRSDHLALHMKRH 409

Source: Salmo salar

Species: Salmo salar

Genus: Salmo

Family: Salmonidae

Order: Salmoniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	366
ZFIN|ZDB-GENE-010129-1	409	klf4b "Kruppel-like factor 4b"	0.434	0.388	0.534	7.9e-46
UNIPROTKB|E1C442	380	KLF2 "Uncharacterized protein"	0.300	0.289	0.747	2.7e-45
UNIPROTKB|Q9Y5W3	355	KLF2 "Krueppel-like factor 2"	0.300	0.309	0.747	2.7e-45
ZFIN|ZDB-GENE-011109-2	363	klf2b "Kruppel-like factor 2b"	0.300	0.303	0.747	3.4e-45
ZFIN|ZDB-GENE-011109-1	380	klf2a "Kruppel-like factor 2a"	0.336	0.323	0.661	4.4e-45
MGI|MGI:1342772	354	Klf2 "Kruppel-like factor 2 (l	0.300	0.310	0.738	5.6e-45
RGD|1359220	351	Klf2 "Kruppel-like factor 2 (l	0.300	0.313	0.738	9.1e-45
UNIPROTKB|E1C3K5	409	KLF1 "Uncharacterized protein"	0.267	0.239	0.787	5e-44
ZFIN|ZDB-GENE-111014-1	396	klf4a "Kruppel-like factor 4a"	0.270	0.25	0.79	8.1e-44
UNIPROTKB|A7YWE2	477	KLF4 "Uncharacterized protein"	0.267	0.205	0.787	1.3e-43

ZFIN|ZDB-GENE-010129-1 klf4b "Kruppel-like factor 4b" [Danio rerio (taxid:7955)]

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 92/172 (53%), Positives = 116/172 (67%)

Query:   204 NYQYH---HYRDDYSLDIKYQPEYEHYRVNSSSHGNYNKLHIHPYYQTHHHTQ-IFQTPS 259
             N Q+H    ++  +  +  + P+Y  ++     HG++N +   P    H     +  TP 
Sbjct:   241 NTQHHIDISHQQQFINNAHFPPQYAQHQ---QYHGHFN-MFSEPLRANHPAMPGVMLTPP 296

Query:   260 ITIKSSLLS----KPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPY 314
              +     LS    KPKR R++W+R++   H+C   GCGKTYTKSSHLKAH+RTHTGEKPY
Sbjct:   297 SSPLLGFLSPEDSKPKRGRRSWARKRTATHSCEFPGCGKTYTKSSHLKAHMRTHTGEKPY 356

Query:   315 QCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
              C W+GCGWKFARSDELTRH+RKHTG RPFQC LCERAFSRSDHL+LHMKRH
Sbjct:   357 HCSWEGCGWKFARSDELTRHYRKHTGHRPFQCHLCERAFSRSDHLALHMKRH 408

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0010629 "negative regulation of gene expression" evidence=IGI;IMP

GO:0030099 "myeloid cell differentiation" evidence=IGI

GO:0005634 "nucleus" evidence=IC

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0030218 "erythrocyte differentiation" evidence=IMP

GO:0048785 "hatching gland development" evidence=IMP

GO:0035188 "hatching" evidence=IMP

GO:0030097 "hemopoiesis" evidence=IMP

GO:0003677 "DNA binding" evidence=IDA

UNIPROTKB|E1C442 KLF2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 83/111 (74%), Positives = 94/111 (84%)

Query:   257 TPSITIKSSLLSKPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQ 315
             TP  +    L SKPKR R++W R++   HTC++ GCGKTYTKSSHLKAHLRTHTGEKPY 
Sbjct:   269 TPPSSPLELLDSKPKRGRRSWPRKRTATHTCTYAGCGKTYTKSSHLKAHLRTHTGEKPYH 328

Query:   316 CGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
             C W+GCGWKFARSDELTRH+RKHTG RPFQC LC+RAFSRSDHL+LHMKRH
Sbjct:   329 CNWEGCGWKFARSDELTRHYRKHTGHRPFQCHLCDRAFSRSDHLALHMKRH 379

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q9Y5W3 KLF2 "Krueppel-like factor 2" [Homo sapiens (taxid:9606)]

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 83/111 (74%), Positives = 93/111 (83%)

Query:   257 TPSITIKSSLLSKPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQ 315
             TP  +    L +KPKR R++W R++   HTCS+ GCGKTYTKSSHLKAHLRTHTGEKPY 
Sbjct:   244 TPPASPLELLEAKPKRGRRSWPRKRTATHTCSYAGCGKTYTKSSHLKAHLRTHTGEKPYH 303

Query:   316 CGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
             C W GCGWKFARSDELTRH+RKHTG RPFQC LC+RAFSRSDHL+LHMKRH
Sbjct:   304 CNWDGCGWKFARSDELTRHYRKHTGHRPFQCHLCDRAFSRSDHLALHMKRH 354

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0032715 "negative regulation of interleukin-6 production" evidence=IEA

GO:0035264 "multicellular organism growth" evidence=IEA

GO:0043249 "erythrocyte maturation" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0070301 "cellular response to hydrogen peroxide" evidence=IEA

GO:0071347 "cellular response to interleukin-1" evidence=IEA

GO:0071356 "cellular response to tumor necrosis factor" evidence=IEA

GO:0005634 "nucleus" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=NAS

GO:0051247 "positive regulation of protein metabolic process" evidence=IGI

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IGI

GO:0036003 "positive regulation of transcription from RNA polymerase II promoter in response to stress" evidence=IMP

GO:0071499 "cellular response to laminar fluid shear stress" evidence=IMP

ZFIN|ZDB-GENE-011109-2 klf2b "Kruppel-like factor 2b" [Danio rerio (taxid:7955)]

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 83/111 (74%), Positives = 93/111 (83%)

Query:   257 TPSITIKSSLLSKPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQ 315
             TP  +    + SKPKR R+ W R+++  HTC++ GCGKTYTKSSHLKAH RTHTGEKPY 
Sbjct:   252 TPPSSPLELMESKPKRGRRTWPRKRMATHTCTYAGCGKTYTKSSHLKAHHRTHTGEKPYH 311

Query:   316 CGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
             C W+GCGWKFARSDELTRHFRKHTG RPFQC LCERAFSRSDHL+LHMKRH
Sbjct:   312 CNWEGCGWKFARSDELTRHFRKHTGHRPFQCHLCERAFSRSDHLALHMKRH 362

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-011109-1 klf2a "Kruppel-like factor 2a" [Danio rerio (taxid:7955)]

 Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
 Identities = 90/136 (66%), Positives = 101/136 (74%)

Query:   244 PYYQTHHHTQI---FQTPS------ITIKSSLL---SKPKR-RQNWSRRKIIMHTCSHNG 290
             PY  THH +        P+      +T  SS L   +KPKR R+ W R++   HTC+ +G
Sbjct:   244 PYQSTHHFSMCDDGLAMPNANQRVLLTPPSSPLELDAKPKRGRRTWPRKRTATHTCTFSG 303

Query:   291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCE 350
             CGKTYTKSSHLKAH RTHTGEKPY C W+GCGWKFARSDELTRHFRKHTG RPFQC LCE
Sbjct:   304 CGKTYTKSSHLKAHHRTHTGEKPYHCSWEGCGWKFARSDELTRHFRKHTGHRPFQCHLCE 363

Query:   351 RAFSRSDHLSLHMKRH 366
             RAFSRSDHL+LHMKRH
Sbjct:   364 RAFSRSDHLALHMKRH 379

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0061444 "endocardial cushion cell development" evidence=IMP

GO:0003171 "atrioventricular valve development" evidence=IMP

MGI|MGI:1342772 Klf2 "Kruppel-like factor 2 (lung)" [Mus musculus (taxid:10090)]

 Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
 Identities = 82/111 (73%), Positives = 93/111 (83%)

Query:   257 TPSITIKSSLLSKPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQ 315
             TP  +    L +KPKR R++W R++   HTCS+  CGKTYTKSSHLKAHLRTHTGEKPY 
Sbjct:   243 TPPSSPLELLEAKPKRGRRSWPRKRAATHTCSYTNCGKTYTKSSHLKAHLRTHTGEKPYH 302

Query:   316 CGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
             C W+GCGWKFARSDELTRH+RKHTG RPFQC LC+RAFSRSDHL+LHMKRH
Sbjct:   303 CNWEGCGWKFARSDELTRHYRKHTGHRPFQCHLCDRAFSRSDHLALHMKRH 353

GO:0000902 "cell morphogenesis" evidence=IMP

GO:0001701 "in utero embryonic development" evidence=IMP

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO;ISA

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0032715 "negative regulation of interleukin-6 production" evidence=ISO

GO:0034101 "erythrocyte homeostasis" evidence=IMP

GO:0035264 "multicellular organism growth" evidence=IMP

GO:0036003 "positive regulation of transcription from RNA polymerase II promoter in response to stress" evidence=ISO

GO:0043249 "erythrocyte maturation" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO;IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO;IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0051247 "positive regulation of protein metabolic process" evidence=ISO

GO:0071499 "cellular response to laminar fluid shear stress" evidence=ISO

RGD|1359220 Klf2 "Kruppel-like factor 2 (lung)" [Rattus norvegicus (taxid:10116)]

 Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
 Identities = 82/111 (73%), Positives = 92/111 (82%)

Query:   257 TPSITIKSSLLSKPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQ 315
             TP  +    L +KPKR R++W R++   HTCS+  CGKTYTKSSHLKAHLRTHTGEKPY 
Sbjct:   240 TPPSSPLELLEAKPKRGRRSWPRKRAATHTCSYTNCGKTYTKSSHLKAHLRTHTGEKPYH 299

Query:   316 CGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
             C W GCGWKFARSDELTRH+RKHTG RPFQC LC+RAFSRSDHL+LHMKRH
Sbjct:   300 CNWDGCGWKFARSDELTRHYRKHTGHRPFQCHLCDRAFSRSDHLALHMKRH 350

GO:0000902 "cell morphogenesis" evidence=IEA;ISO

GO:0001701 "in utero embryonic development" evidence=IEA;ISO

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IMP

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0032715 "negative regulation of interleukin-6 production" evidence=IMP

GO:0034101 "erythrocyte homeostasis" evidence=ISO

GO:0034616 "response to laminar fluid shear stress" evidence=IEP

GO:0035264 "multicellular organism growth" evidence=IEA;ISO

GO:0036003 "positive regulation of transcription from RNA polymerase II promoter in response to stress" evidence=ISO

GO:0043249 "erythrocyte maturation" evidence=IEA;ISO

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO;IMP

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0051247 "positive regulation of protein metabolic process" evidence=IEA;ISO

GO:0070301 "cellular response to hydrogen peroxide" evidence=IEP

GO:0071347 "cellular response to interleukin-1" evidence=IEP

GO:0071356 "cellular response to tumor necrosis factor" evidence=IEP

GO:0071407 "cellular response to organic cyclic compound" evidence=IEP

GO:0071499 "cellular response to laminar fluid shear stress" evidence=ISO

GO:1901653 "cellular response to peptide" evidence=IEP

UNIPROTKB|E1C3K5 KLF1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 78/99 (78%), Positives = 88/99 (88%)

Query:   269 KPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFAR 327
             KPKR R++W+R++   H C + GCGKTYTKSSHLKAH+RTHTGEKPY C W+GCGWKFAR
Sbjct:   310 KPKRGRRSWARKRTATHNCEYPGCGKTYTKSSHLKAHMRTHTGEKPYHCTWEGCGWKFAR 369

Query:   328 SDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
             SDELTRH+RKHTG RPFQC LCERAFSRSDHL+LHMKRH
Sbjct:   370 SDELTRHYRKHTGHRPFQCHLCERAFSRSDHLALHMKRH 408

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000790 "nuclear chromatin" evidence=IEA

GO:0000987 "core promoter proximal region sequence-specific DNA binding" evidence=IEA

GO:0001701 "in utero embryonic development" evidence=IEA

GO:0001889 "liver development" evidence=IEA

GO:0006338 "chromatin remodeling" evidence=IEA

GO:0035162 "embryonic hemopoiesis" evidence=IEA

GO:0043249 "erythrocyte maturation" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

ZFIN|ZDB-GENE-111014-1 klf4a "Kruppel-like factor 4a" [Danio rerio (taxid:7955)]

 Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 79/100 (79%), Positives = 88/100 (88%)

Query:   268 SKPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFA 326
             SKPKR R++W R++I  HTC + GCGKTYTKSSHLKAH RTHTGEKPY C W+GCGWKFA
Sbjct:   296 SKPKRGRRSWPRKRIATHTCDYAGCGKTYTKSSHLKAHHRTHTGEKPYHCDWEGCGWKFA 355

Query:   327 RSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
             RSDELTRH+RKHTG RPFQC  C+RAFSRSDHL+LHMKRH
Sbjct:   356 RSDELTRHYRKHTGIRPFQCLKCDRAFSRSDHLALHMKRH 395

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IMP

UNIPROTKB|A7YWE2 KLF4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 78/99 (78%), Positives = 86/99 (86%)

Query:   269 KPKR-RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFAR 327
             KPKR R++W R++   HTC + GCGKTYTKSSHLKAHLRTHTGEKPY C W GCGWKFAR
Sbjct:   378 KPKRGRRSWPRKRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFAR 437

Query:   328 SDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
             SDELTRH+RKHTG RPFQC  C+RAFSRSDHL+LHMKRH
Sbjct:   438 SDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 476

GO:2000342 "negative regulation of chemokine (C-X-C motif) ligand 2 production" evidence=IEA

GO:0090051 "negative regulation of cell migration involved in sprouting angiogenesis" evidence=IEA

GO:0071363 "cellular response to growth factor stimulus" evidence=IEA

GO:0060761 "negative regulation of response to cytokine stimulus" evidence=IEA

GO:0048730 "epidermis morphogenesis" evidence=IEA

GO:0046985 "positive regulation of hemoglobin biosynthetic process" evidence=IEA

GO:0045444 "fat cell differentiation" evidence=IEA

GO:0045415 "negative regulation of interleukin-8 biosynthetic process" evidence=IEA

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA

GO:0035166 "post-embryonic hemopoiesis" evidence=IEA

GO:0034115 "negative regulation of heterotypic cell-cell adhesion" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0032088 "negative regulation of NF-kappaB transcription factor activity" evidence=IEA

GO:0031077 "post-embryonic camera-type eye development" evidence=IEA

GO:0019827 "stem cell maintenance" evidence=IEA

GO:0009913 "epidermal cell differentiation" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0001190 "RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription" evidence=IEA

GO:0001085 "RNA polymerase II transcription factor binding" evidence=IEA

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=IEA

GO:0001010 "sequence-specific DNA binding transcription factor recruiting transcription factor activity" evidence=IEA

GO:0000987 "core promoter proximal region sequence-specific DNA binding" evidence=IEA

GO:0000790 "nuclear chromatin" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	366
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	3e-04

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 37.4 bits (87), Expect = 3e-04
 Identities = 12/26 (46%), Positives = 19/26 (73%)

Query: 330 ELTRHFRKHTGDRPFQCTLCERAFSR 355
            L RH R HTG++P++C +C ++FS 
Sbjct: 1   NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	366
KOG2462|consensus	279		99.9
KOG2462|consensus	279		99.74
KOG3576|consensus	267		99.42
KOG3623|consensus	1007		99.39
KOG1074|consensus	958		99.34
KOG3623|consensus	1007		99.33
KOG3608|consensus	467		99.28
KOG3576|consensus	267		99.28
KOG1074|consensus	958		99.26
KOG3608|consensus	467		99.19
PHA00733	128	hypothetical protein	98.67
PLN03086	567	PRLI-interacting factor K; Provisional	98.56
PLN03086	567	PRLI-interacting factor K; Provisional	98.52
PHA02768	55	hypothetical protein; Provisional	98.47
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.39
PHA00733	128	hypothetical protein	98.13
PHA02768	55	hypothetical protein; Provisional	97.96
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.89
KOG3993|consensus	500		97.8
PHA00732	79	hypothetical protein	97.69
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.62
KOG3993|consensus	500		97.52
PHA00616	44	hypothetical protein	97.52
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.48
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.92
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.88
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.87
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.77
PHA00616	44	hypothetical protein	96.77
PHA00732	79	hypothetical protein	96.57
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.45
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.43
smart00355	26	ZnF_C2H2 zinc finger.	96.24
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.21
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	95.95
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	95.91
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	95.19
PRK04860	160	hypothetical protein; Provisional	94.73
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	94.57
KOG2231|consensus	669		94.37
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	93.6
smart00355	26	ZnF_C2H2 zinc finger.	93.36
COG5048	467	FOG: Zn-finger [General function prediction only]	92.84
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	92.52
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	91.77
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	91.4
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	90.96
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	89.54
COG5048	467	FOG: Zn-finger [General function prediction only]	88.84
PRK04860	160	hypothetical protein; Provisional	87.18
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	86.71
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	86.27
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	84.8
KOG1146|consensus	1406		83.2
KOG2482|consensus	423		82.6

>KOG2462|consensus

Probab=99.90  E-value=1.5e-24  Score=206.89  Aligned_cols=133  Identities=26%  Similarity=0.453  Sum_probs=120.6

Q ss_pred             CCCcccccccccccchhHhHhhhhccccC--CCCccccCCCCCccccchhhhcccceee--eecCCCCCcccCchhHHHH
Q psy1991         229 VNSSSHGNYNKLHIHPYYQTHHHTQIFQT--PSITIKSSLLSKPKRRQNWSRRKIIMHT--CSHNGCGKTYTKSSHLKAH  304 (366)
Q Consensus       229 ~~P~iC~~CGK~F~~~~~L~hHh~~iH~~--p~~~~kC~~Csk~f~~k~~l~~H~k~H~--C~~~~CgK~F~skssLk~H  304 (366)
                      +..+.|++|||.+.+..+|.+| ++.|..  ....+.|..|+|.+....+++.|+++|.  |+|.+|||.|.+.+-|+.|
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrH-kQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPWLLQGH  206 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRH-KQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSRPWLLQGH  206 (279)
T ss_pred             CCceeccccccccccccccchh-hcccccccccccccCCCCCceeeehHHHhhHhhccCCCcccccccccccchHHhhcc
Confidence            3458899999999999999955 444432  2357899999999999999999999998  8888899999999999999


Q ss_pred             HHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhh
Q psy1991         305 LRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       305 ~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~K  364 (366)
                      +|+|+|||||.|  +.|+|.|..+++|+.||++|.+.|+|+|..|+|+|++++.|.+|..
T Consensus       207 iRTHTGEKPF~C--~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  207 IRTHTGEKPFSC--PHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             cccccCCCCccC--CcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            999999999999  4599999999999999999999999999999999999999999975

>KOG2462|consensus

Probab=99.74  E-value=1.1e-18  Score=166.92  Aligned_cols=104  Identities=38%  Similarity=0.647  Sum_probs=94.5

Q ss_pred             CCccccCCCCCccccchhhhcccceee-------eecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHH
Q psy1991         259 SITIKSSLLSKPKRRQNWSRRKIIMHT-------CSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDEL  331 (366)
Q Consensus       259 ~~~~kC~~Csk~f~~k~~l~~H~k~H~-------C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L  331 (366)
                      ...++|..|++.+.....|.+|...|.       +.|+.|||.|.+..+|+.|+|+|+  -+++|.+  |||.|.+...|
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~i--CGKaFSRPWLL  203 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGI--CGKAFSRPWLL  203 (279)
T ss_pred             CCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCccccc--ccccccchHHh
Confidence            346889999999999999999987664       333449999999999999999997  6799977  99999999999


Q ss_pred             HHHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         332 TRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       332 ~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +.|+|+|+|||||.|..|+|.|+.+++|+.||+||
T Consensus       204 QGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTH  238 (279)
T KOG2462|consen  204 QGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTH  238 (279)
T ss_pred             hcccccccCCCCccCCcccchhcchHHHHHHHHhh
Confidence            99999999999999999999999999999999998

>KOG3576|consensus

Probab=99.42  E-value=2.7e-13  Score=125.61  Aligned_cols=109  Identities=29%  Similarity=0.531  Sum_probs=86.6

Q ss_pred             CCcccccccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceeeeecCCCCCcccCchhHHHHHHhhc
Q psy1991         230 NSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHT  309 (366)
Q Consensus       230 ~P~iC~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F~skssLk~H~rtH~  309 (366)
                      ..+.|.+|||.|.-.+.|.+|.+. |                       ...++|.|.+  |||.|....+|++|+|+|+
T Consensus       116 d~ftCrvCgK~F~lQRmlnrh~kc-h-----------------------~~vkr~lct~--cgkgfndtfdlkrh~rtht  169 (267)
T KOG3576|consen  116 DSFTCRVCGKKFGLQRMLNRHLKC-H-----------------------SDVKRHLCTF--CGKGFNDTFDLKRHTRTHT  169 (267)
T ss_pred             CeeeeehhhhhhhHHHHHHHHhhh-c-----------------------cHHHHHHHhh--ccCcccchhhhhhhhcccc
Confidence            356777777777777666644211 1                       1123455999  9999999999999999999


Q ss_pred             CCCceecCCCCCCCcccChHHHHHHhhhhcC-----------CCCeecCccccccCChhHHHHHhhcC
Q psy1991         310 GEKPYQCGWKGCGWKFARSDELTRHFRKHTG-----------DRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       310 ~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtg-----------eKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |.+||+|..  |+|.|..+-.|..|.+.-+|           +|-|.|+.||.+-.+...+..|++.|
T Consensus       170 gvrpykc~~--c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~  235 (267)
T KOG3576|consen  170 GVRPYKCSL--CEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLH  235 (267)
T ss_pred             Cccccchhh--hhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhc
Confidence            999999955  99999999999999875444           45699999999998888888888764

>KOG3623|consensus

Probab=99.39  E-value=2.8e-13  Score=142.74  Aligned_cols=85  Identities=39%  Similarity=0.752  Sum_probs=78.5

Q ss_pred             hhhcccceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCC
Q psy1991         276 WSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSR  355 (366)
Q Consensus       276 ~l~~H~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~  355 (366)
                      .++....++.|..  |+|+|...++|.+|.-.|+|.|||+|.|  |.|.|+.+..|..|+|.|.|||||+|+.|+|+|+.
T Consensus       887 ~~kte~gmyaCDq--CDK~FqKqSSLaRHKYEHsGqRPyqC~i--CkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSH  962 (1007)
T KOG3623|consen  887 HAKTEDGMYACDQ--CDKAFQKQSSLARHKYEHSGQRPYQCII--CKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSH  962 (1007)
T ss_pred             cccCccccchHHH--HHHHHHhhHHHHHhhhhhcCCCCcccch--hhHhhhhhhhhhhhhhhccCCCcchhhhhhhhccc
Confidence            4444556777877  9999999999999999999999999977  99999999999999999999999999999999999


Q ss_pred             hhHHHHHhh
Q psy1991         356 SDHLSLHMK  364 (366)
Q Consensus       356 kssLk~H~K  364 (366)
                      ..+...||-
T Consensus       963 SGSYSQHMN  971 (1007)
T KOG3623|consen  963 SGSYSQHMN  971 (1007)
T ss_pred             ccchHhhhc
Confidence            999999983

>KOG1074|consensus

Probab=99.34  E-value=5.7e-13  Score=142.19  Aligned_cols=51  Identities=43%  Similarity=0.888  Sum_probs=48.5

Q ss_pred             eecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         314 YQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       314 f~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ..|.+  |++.|....+|..|+|+|+|+|||.|.+|++.|..+.+|+.||.+|
T Consensus       880 h~C~v--Cgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH  930 (958)
T KOG1074|consen  880 HVCNV--CGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTH  930 (958)
T ss_pred             hhhcc--chhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccc
Confidence            46855  9999999999999999999999999999999999999999999987

>KOG3623|consensus

Probab=99.33  E-value=1.9e-13  Score=143.89  Aligned_cols=120  Identities=22%  Similarity=0.342  Sum_probs=91.0

Q ss_pred             cccccccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceeeeecCCCCCcccCchhHHHHHHhhcCC
Q psy1991         232 SSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGE  311 (366)
Q Consensus       232 ~iC~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F~skssLk~H~rtH~~e  311 (366)
                      ..|..|++.+.....|+.|.+..|......+.|..|...|..+..|.+|+..|+=    |+-.-       .|.-.-...
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkp----g~dqa-------~sltqsa~l  279 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKP----GGDQA-------ISLTQSALL  279 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcC----CCccc-------ccccchhhh
Confidence            6799999999999999999888888777677766666666655555555555430    11000       010111234


Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhh
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~K  364 (366)
                      |.|+|  .+|||.|+.+..|+.|+|+|.|||||.|+.|+|+|+...++..||.
T Consensus       280 RKFKC--tECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  280 RKFKC--TECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             ccccc--cccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            67999  7799999999999999999999999999999999999999999974

>KOG3608|consensus

Probab=99.28  E-value=7.6e-13  Score=130.60  Aligned_cols=104  Identities=19%  Similarity=0.395  Sum_probs=61.8

Q ss_pred             cccccccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceee----eecCCCCCcccCchhHHHHHHh
Q psy1991         232 SSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHT----CSHNGCGKTYTKSSHLKAHLRT  307 (366)
Q Consensus       232 ~iC~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~----C~~~~CgK~F~skssLk~H~rt  307 (366)
                      ..|+.||..|+++..|--|-++.-......+.|..|.|.|.....|+.|+..|.    |+-  |+.+....++|.+|++.
T Consensus       208 vACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCpl--Cdmtc~~~ssL~~H~r~  285 (467)
T KOG3608|consen  208 VACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPL--CDMTCSSASSLTTHIRY  285 (467)
T ss_pred             EecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccc--cccCCCChHHHHHHHHh
Confidence            456666666666666554544333333345666666666666666666655443    433  66666666666666664


Q ss_pred             -hcCCCceecCCCCCCCcccChHHHHHHhhhhc
Q psy1991         308 -HTGEKPYQCGWKGCGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       308 -H~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHt  339 (366)
                       |...|||+|  +.|++.|.+...|.+|..+|.
T Consensus       286 rHs~dkpfKC--d~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  286 RHSKDKPFKC--DECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             hhccCCCccc--cchhhhhccHHHHHHHHHhcc
Confidence             666666666  446666666666666655554

>KOG3576|consensus

Probab=99.28  E-value=6.2e-13  Score=123.23  Aligned_cols=79  Identities=41%  Similarity=0.797  Sum_probs=74.8

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHH
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSL  361 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~  361 (366)
                      ..+.|..  |+|.|.-..-|.+|++-|...+.+-|.+  |||.|...-+|++|+|+|+|.+||+|..|+|.|.++-+|..
T Consensus       116 d~ftCrv--CgK~F~lQRmlnrh~kch~~vkr~lct~--cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsles  191 (267)
T KOG3576|consen  116 DSFTCRV--CGKKFGLQRMLNRHLKCHSDVKRHLCTF--CGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLES  191 (267)
T ss_pred             Ceeeeeh--hhhhhhHHHHHHHHhhhccHHHHHHHhh--ccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHH
Confidence            4466888  9999999999999999999999999977  99999999999999999999999999999999999999999


Q ss_pred             Hhh
Q psy1991         362 HMK  364 (366)
Q Consensus       362 H~K  364 (366)
                      |++
T Consensus       192 hl~  194 (267)
T KOG3576|consen  192 HLK  194 (267)
T ss_pred             HHH
Confidence            975

>KOG1074|consensus

Probab=99.26  E-value=3.7e-12  Score=136.04  Aligned_cols=50  Identities=4%  Similarity=-0.112  Sum_probs=34.9

Q ss_pred             CcccccccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccc
Q psy1991         231 SSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKII  282 (366)
Q Consensus       231 P~iC~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k  282 (366)
                      ++.|..|.|.|...+.|+ .|.+.|... +.|+|..|+..|..+..|+.|..
T Consensus       353 khkCr~CakvfgS~SaLq-iHlRSHTGE-RPfqCnvCG~~FSTkGNLKvH~~  402 (958)
T KOG1074|consen  353 KHKCRFCAKVFGSDSALQ-IHLRSHTGE-RPFQCNVCGNRFSTKGNLKVHFQ  402 (958)
T ss_pred             cchhhhhHhhcCchhhhh-hhhhccCCC-CCeeecccccccccccceeeeee
Confidence            456777777777777777 555666544 36777777777777777777653

>KOG3608|consensus

Probab=99.19  E-value=8e-12  Score=123.47  Aligned_cols=129  Identities=22%  Similarity=0.391  Sum_probs=107.3

Q ss_pred             CCCcccccccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhccc-------ceeeeecCCCCCcccCchhH
Q psy1991         229 VNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKI-------IMHTCSHNGCGKTYTKSSHL  301 (366)
Q Consensus       229 ~~P~iC~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~-------k~H~C~~~~CgK~F~skssL  301 (366)
                      .++|.|.+|-|.|.++..|..|..+...    .++|+.|...-...+.|++|+       +.++|.+  |++.|.+.+.|
T Consensus       235 ~n~fqC~~C~KrFaTeklL~~Hv~rHvn----~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~--Cd~~c~~esdL  308 (467)
T KOG3608|consen  235 TNSFQCAQCFKRFATEKLLKSHVVRHVN----CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDE--CDTRCVRESDL  308 (467)
T ss_pred             CCchHHHHHHHHHhHHHHHHHHHHHhhh----cccccccccCCCChHHHHHHHHhhhccCCCccccc--hhhhhccHHHH
Confidence            3479999999999999999866544433    356667776666667776665       5667888  99999999999


Q ss_pred             HHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhc-CC--CCeecCccccccCChhHHHHHhh
Q psy1991         302 KAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHT-GD--RPFQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       302 k~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHt-ge--KpykC~~CgKsFs~kssLk~H~K  364 (366)
                      .+|..+|. +-.|.|..+.|..+|++...+++|++.++ |.  .+|.|..|++.|.+..+|.+|++
T Consensus       309 ~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~  373 (467)
T KOG3608|consen  309 AKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLM  373 (467)
T ss_pred             HHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHH
Confidence            99999987 77899988889999999999999988654 54  45999999999999999999965

>PHA00733 hypothetical protein

Probab=98.67  E-value=1.1e-08  Score=88.94  Aligned_cols=85  Identities=20%  Similarity=0.291  Sum_probs=66.8

Q ss_pred             hhhhcccceeeeecCCCCCcccCchhHHHH--HH---hhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         275 NWSRRKIIMHTCSHNGCGKTYTKSSHLKAH--LR---THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       275 ~~l~~H~k~H~C~~~~CgK~F~skssLk~H--~r---tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      ..+..+.+.+.|..  |.+.|.....|..|  ++   .+.++++|.|  +.|++.|.+...|..|++.|  +.+|.|+.|
T Consensus        32 ~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C--~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~C  105 (128)
T PHA00733         32 HSLTPEQKRLIRAV--VKTLIYNPQLLDESSYLYKLLTSKAVSPYVC--PLCLMPFSSSVSLKQHIRYT--EHSKVCPVC  105 (128)
T ss_pred             hcCChhhhhHHHHH--HhhhccChhhhcchHHHHhhcccCCCCCccC--CCCCCcCCCHHHHHHHHhcC--CcCccCCCC
Confidence            33444455566777  88888777776665  22   2345889999  55999999999999999987  457999999


Q ss_pred             ccccCChhHHHHHhhc
Q psy1991         350 ERAFSRSDHLSLHMKR  365 (366)
Q Consensus       350 gKsFs~kssLk~H~Kt  365 (366)
                      ++.|.....|.+|+..
T Consensus       106 gK~F~~~~sL~~H~~~  121 (128)
T PHA00733        106 GKEFRNTDSTLDHVCK  121 (128)
T ss_pred             CCccCCHHHHHHHHHH
Confidence            9999999999999864

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.56  E-value=1.1e-07  Score=100.19  Aligned_cols=106  Identities=15%  Similarity=0.372  Sum_probs=49.8

Q ss_pred             CcccccccccccchhHhHhhhhccccCCCCccccC--CCCCccccchhhhcccceeeeecCCCCCcccCchhHHHHHHhh
Q psy1991         231 SSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSS--LLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTH  308 (366)
Q Consensus       231 P~iC~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~--~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F~skssLk~H~rtH  308 (366)
                      --.|..|.+......... |...   |..-...|+  .|+..++ +..+..|.   .|+.  |++.|. ...|..|+++|
T Consensus       407 ~V~C~NC~~~i~l~~l~l-He~~---C~r~~V~Cp~~~Cg~v~~-r~el~~H~---~C~~--Cgk~f~-~s~LekH~~~~  475 (567)
T PLN03086        407 TVECRNCKHYIPSRSIAL-HEAY---CSRHNVVCPHDGCGIVLR-VEEAKNHV---HCEK--CGQAFQ-QGEMEKHMKVF  475 (567)
T ss_pred             eEECCCCCCccchhHHHH-HHhh---CCCcceeCCcccccceee-ccccccCc---cCCC--CCCccc-hHHHHHHHHhc
Confidence            346999997766655443 3211   222223333  2444442 22223332   2444  555553 34455555554


Q ss_pred             cCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcccccc
Q psy1991         309 TGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAF  353 (366)
Q Consensus       309 ~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsF  353 (366)
                      +  +++.|  + |++.+ .+..|..|+++|.+++++.|..|++.|
T Consensus       476 H--kpv~C--p-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v  514 (567)
T PLN03086        476 H--EPLQC--P-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMV  514 (567)
T ss_pred             C--CCccC--C-CCCCc-chhHHHhhhhccCCCCceeCCCCCCcc
Confidence            2  44555  3 55433 334555555555555555555555555

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.52  E-value=1e-07  Score=100.49  Aligned_cols=112  Identities=15%  Similarity=0.301  Sum_probs=86.0

Q ss_pred             ccccc--ccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhccccee----eeecCCCCCcccCchhHHHHH
Q psy1991         232 SSHGN--YNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMH----TCSHNGCGKTYTKSSHLKAHL  305 (366)
Q Consensus       232 ~iC~~--CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H----~C~~~~CgK~F~skssLk~H~  305 (366)
                      -.|+.  ||..|... .+..|           +.|..|++.|. ...+..|++.+    .|+   ||+.+ .+..|..|+
T Consensus       434 V~Cp~~~Cg~v~~r~-el~~H-----------~~C~~Cgk~f~-~s~LekH~~~~Hkpv~Cp---Cg~~~-~R~~L~~H~  496 (567)
T PLN03086        434 VVCPHDGCGIVLRVE-EAKNH-----------VHCEKCGQAFQ-QGEMEKHMKVFHEPLQCP---CGVVL-EKEQMVQHQ  496 (567)
T ss_pred             eeCCcccccceeecc-ccccC-----------ccCCCCCCccc-hHHHHHHHHhcCCCccCC---CCCCc-chhHHHhhh
Confidence            35774  99988543 23323           37888988885 56678887653    364   99766 668999999


Q ss_pred             HhhcCCCceecCCCCCCCccc----------ChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhh
Q psy1991         306 RTHTGEKPYQCGWKGCGWKFA----------RSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       306 rtH~~eKpf~C~i~~CgKsF~----------sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~K  364 (366)
                      ++|.+++++.|.+  |++.|.          ....|..|..++ |.+++.|..||+.+..+ .|..|+.
T Consensus       497 ~thCp~Kpi~C~f--C~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~  561 (567)
T PLN03086        497 ASTCPLRLITCRF--CGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQI  561 (567)
T ss_pred             hccCCCCceeCCC--CCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHH
Confidence            9999999999977  999995          235899999886 89999999999998776 5666753

>PHA02768 hypothetical protein; Provisional

Probab=98.47  E-value=6.6e-08  Score=72.72  Aligned_cols=44  Identities=25%  Similarity=0.560  Sum_probs=36.4

Q ss_pred             ceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHH
Q psy1991         313 PYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLS  360 (366)
Q Consensus       313 pf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk  360 (366)
                      -|.|  +.||+.|.+..+|..|+++|+  ++|+|..|+|.|.+.+.|.
T Consensus         5 ~y~C--~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYEC--PICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCc--chhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            3788  559999999999999999887  6888999999888877764

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.39  E-value=2e-07  Score=59.67  Aligned_cols=26  Identities=46%  Similarity=1.179  Sum_probs=19.9

Q ss_pred             HHHHHhhhhcCCCCeecCccccccCC
Q psy1991         330 ELTRHFRKHTGDRPFQCTLCERAFSR  355 (366)
Q Consensus       330 ~L~~H~rtHtgeKpykC~~CgKsFs~  355 (366)
                      +|.+|+++|+|++||+|++|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            46778888888888888888887763

...

>PHA00733 hypothetical protein

Probab=98.13  E-value=1.8e-06  Score=75.23  Aligned_cols=85  Identities=20%  Similarity=0.287  Sum_probs=62.4

Q ss_pred             CcccccccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceeeeecCCCCCcccCchhHHHHHHhhcC
Q psy1991         231 SSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTG  310 (366)
Q Consensus       231 P~iC~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F~skssLk~H~rtH~~  310 (366)
                      +.+|.+|++.|.+...|.++........                   ....+.+.|..  ||+.|.+...|..|++.|  
T Consensus        40 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~-------------------~~~~kPy~C~~--Cgk~Fss~s~L~~H~r~h--   96 (128)
T PHA00733         40 RLIRAVVKTLIYNPQLLDESSYLYKLLT-------------------SKAVSPYVCPL--CLMPFSSSVSLKQHIRYT--   96 (128)
T ss_pred             hHHHHHHhhhccChhhhcchHHHHhhcc-------------------cCCCCCccCCC--CCCcCCCHHHHHHHHhcC--
Confidence            5789999999998877774411000000                   00123455766  999999999999999987  


Q ss_pred             CCceecCCCCCCCcccChHHHHHHhhhhcC
Q psy1991         311 EKPYQCGWKGCGWKFARSDELTRHFRKHTG  340 (366)
Q Consensus       311 eKpf~C~i~~CgKsF~sk~~L~~H~rtHtg  340 (366)
                      +.+|.|.  .|++.|.....|.+|++..++
T Consensus        97 ~~~~~C~--~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         97 EHSKVCP--VCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CcCccCC--CCCCccCCHHHHHHHHHHhcC
Confidence            4579995  499999999999999987654

>PHA02768 hypothetical protein; Provisional

Probab=97.96  E-value=3.3e-06  Score=63.61  Aligned_cols=44  Identities=27%  Similarity=0.508  Sum_probs=38.1

Q ss_pred             eeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHH
Q psy1991         283 MHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELT  332 (366)
Q Consensus       283 ~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~  332 (366)
                      .+.|+.  ||+.|.+..+|..||++|+  ++++|  ..|++.|.+.+.|.
T Consensus         5 ~y~C~~--CGK~Fs~~~~L~~H~r~H~--k~~kc--~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPI--CGEIYIKRKSMITHLRKHN--TNLKL--SNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcch--hCCeeccHHHHHHHHHhcC--CcccC--CcccceecccceeE
Confidence            456777  9999999999999999998  78999  56999999877664

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.89  E-value=8.7e-06  Score=52.03  Aligned_cols=26  Identities=58%  Similarity=1.270  Sum_probs=23.2

Q ss_pred             hHHHHHHhhcCCCceecCCCCCCCcccC
Q psy1991         300 HLKAHLRTHTGEKPYQCGWKGCGWKFAR  327 (366)
Q Consensus       300 sLk~H~rtH~~eKpf~C~i~~CgKsF~s  327 (366)
                      +|.+||++|+++++|.|++  |++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~--C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPY--CGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESS--SSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCC--CcCeeCc
Confidence            5899999999999999955  9999974

...

>KOG3993|consensus

Probab=97.80  E-value=3.5e-06  Score=85.53  Aligned_cols=81  Identities=26%  Similarity=0.450  Sum_probs=56.4

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcC---------------------
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG---------------------  340 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtg---------------------  340 (366)
                      ..+.|.-  |...|.....|.+|.-.-.-.-.|+|  ++|+|.|.-..+|..|+|.|..                     
T Consensus       266 GdyiCqL--CK~kYeD~F~LAQHrC~RIV~vEYrC--PEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae  341 (500)
T KOG3993|consen  266 GDYICQL--CKEKYEDAFALAQHRCPRIVHVEYRC--PECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAE  341 (500)
T ss_pred             HHHHHHH--HHHhhhhHHHHhhccCCeeEEeeecC--CcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhh
Confidence            3344555  77777777777777532222234777  5677777777777777776631                     


Q ss_pred             ------------CCCeecCccccccCChhHHHHHhhcC
Q psy1991         341 ------------DRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       341 ------------eKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                                  +.-|.|.+|+|+|.++..|+.|+.+|
T Consensus       342 ~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlth  379 (500)
T KOG3993|consen  342 VQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTH  379 (500)
T ss_pred             hhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhh
Confidence                        12499999999999999999998776

>PHA00732 hypothetical protein

Probab=97.69  E-value=2.9e-05  Score=62.47  Aligned_cols=40  Identities=35%  Similarity=0.578  Sum_probs=21.1

Q ss_pred             CCCcccCchhHHHHHHh-hcCCCceecCCCCCCCcccChHHHHHHhhhh
Q psy1991         291 CGKTYTKSSHLKAHLRT-HTGEKPYQCGWKGCGWKFARSDELTRHFRKH  338 (366)
Q Consensus       291 CgK~F~skssLk~H~rt-H~~eKpf~C~i~~CgKsF~sk~~L~~H~rtH  338 (366)
                      ||+.|.+...|+.|++. |.+   +.|  +.|++.|.   .|..|.+++
T Consensus         7 Cgk~F~s~s~Lk~H~r~~H~~---~~C--~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          7 CGFTTVTLFALKQHARRNHTL---TKC--PVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CCCccCCHHHHHHHhhcccCC---Ccc--CCCCCEeC---Chhhhhccc
Confidence            66666666666666553 332   356  33666665   355555433

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.62  E-value=1.9e-05  Score=78.00  Aligned_cols=54  Identities=31%  Similarity=0.823  Sum_probs=41.9

Q ss_pred             CCceecCCCCCCCcccChHHHHHHhhh-h------------------cCCCCeecCccccccCChhHHHHHhh
Q psy1991         311 EKPYQCGWKGCGWKFARSDELTRHFRK-H------------------TGDRPFQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       311 eKpf~C~i~~CgKsF~sk~~L~~H~rt-H------------------tgeKpykC~~CgKsFs~kssLk~H~K  364 (366)
                      +|||+|++++|+|.++....|+-|+.. |                  ...|||.|++|+|+|+....|+-|++
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            467777777777777777777777652 2                  13589999999999999999999975

>KOG3993|consensus

Probab=97.52  E-value=4e-05  Score=78.06  Aligned_cols=78  Identities=23%  Similarity=0.384  Sum_probs=52.1

Q ss_pred             eeeeecCCCCCcccCchhHHHHHHhhcCCC----------------------------------------------ceec
Q psy1991         283 MHTCSHNGCGKTYTKSSHLKAHLRTHTGEK----------------------------------------------PYQC  316 (366)
Q Consensus       283 ~H~C~~~~CgK~F~skssLk~H~rtH~~eK----------------------------------------------pf~C  316 (366)
                      .+.|..  |+|.|.+..-|+.|+.+|+...                                              ...|
T Consensus       356 i~~C~~--C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sael~~p  433 (500)
T KOG3993|consen  356 IFSCHT--CGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSAELELP  433 (500)
T ss_pred             eeecHH--hhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeeccccccCC
Confidence            455666  9999999888888887764210                                              0123


Q ss_pred             CCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhh
Q psy1991         317 GWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       317 ~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~K  364 (366)
                      ++  |+..+.++..--.|.+.-..+.-|.|.+|...|.....|.+|+.
T Consensus       434 p~--~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin  479 (500)
T KOG3993|consen  434 PY--DGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHIN  479 (500)
T ss_pred             CC--CCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhh
Confidence            22  45455555444444443334556899999999999999999964

>PHA00616 hypothetical protein

Probab=97.52  E-value=3.7e-05  Score=55.46  Aligned_cols=34  Identities=24%  Similarity=0.461  Sum_probs=27.0

Q ss_pred             ceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         313 PYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       313 pf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +|+|  +.||+.|..+..|.+|++.|+|++++.|+.
T Consensus         1 pYqC--~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQC--LRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCcc--chhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            5778  558888888888888888888888887764

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.48  E-value=4.4e-05  Score=46.64  Aligned_cols=23  Identities=39%  Similarity=1.041  Sum_probs=15.7

Q ss_pred             eecCccccccCChhHHHHHhhcC
Q psy1991         344 FQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       344 ykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |+|+.|++.|.++..|.+|+++|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56777777777777777776654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.92  E-value=0.00041  Score=41.75  Aligned_cols=23  Identities=39%  Similarity=0.973  Sum_probs=14.3

Q ss_pred             eecCccccccCChhHHHHHhhcC
Q psy1991         344 FQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       344 ykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |.|++|++.|.+...|+.|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            56777777777777777776653

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.88  E-value=0.00062  Score=54.30  Aligned_cols=70  Identities=21%  Similarity=0.526  Sum_probs=12.5

Q ss_pred             eecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhh
Q psy1991         286 CSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       286 C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~K  364 (366)
                      |..  |+..|.+...|..||...++-.. .     ....+.....+..+.+.-. ...+.|..|++.|.....|..||+
T Consensus         2 C~~--C~~~f~~~~~l~~H~~~~H~~~~-~-----~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~   71 (100)
T PF12756_consen    2 CLF--CDESFSSVDDLLQHMKKKHGFDI-P-----DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMR   71 (100)
T ss_dssp             --------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHH
T ss_pred             ccc--ccccccccccccccccccccccc-c-----ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHc
Confidence            444  77777777777777655332110 0     0011112222323322111 114556666666666666666654

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.87  E-value=0.0006  Score=43.14  Aligned_cols=24  Identities=38%  Similarity=0.829  Sum_probs=17.4

Q ss_pred             CeecCccccccCChhHHHHHhhcC
Q psy1991         343 PFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       343 pykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|.|..|++.|.....|..|++.|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHh
Confidence            467777777777777777777665

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.77  E-value=0.0015  Score=48.45  Aligned_cols=47  Identities=23%  Similarity=0.636  Sum_probs=25.0

Q ss_pred             eecCCCCCCCcccChHHHHHHhh-hhcCC-CCeecCccccccCChhHHHHHhhc
Q psy1991         314 YQCGWKGCGWKFARSDELTRHFR-KHTGD-RPFQCTLCERAFSRSDHLSLHMKR  365 (366)
Q Consensus       314 f~C~i~~CgKsF~sk~~L~~H~r-tHtge-KpykC~~CgKsFs~kssLk~H~Kt  365 (366)
                      |.|++  |++ ..+...|..|.. .|..+ +.+.|++|...+.  .+|.+|++.
T Consensus         3 f~CP~--C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~   51 (54)
T PF05605_consen    3 FTCPY--CGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNS   51 (54)
T ss_pred             cCCCC--CCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHH
Confidence            56655  666 333455666644 34433 3466666665433  366666543

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00616 hypothetical protein

Probab=96.77  E-value=0.0005  Score=49.66  Aligned_cols=33  Identities=18%  Similarity=0.427  Sum_probs=29.6

Q ss_pred             eeeecCCCCCcccCchhHHHHHHhhcCCCceecCC
Q psy1991         284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGW  318 (366)
Q Consensus       284 H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i  318 (366)
                      ++|..  ||+.|..+++|.+|++.|++++++.|++
T Consensus         2 YqC~~--CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          2 YQCLR--CGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             Cccch--hhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            45766  9999999999999999999999998854

>PHA00732 hypothetical protein

Probab=96.57  E-value=0.0015  Score=52.58  Aligned_cols=45  Identities=27%  Similarity=0.647  Sum_probs=37.8

Q ss_pred             ceecCCCCCCCcccChHHHHHHhhh-hcCCCCeecCccccccCChhHHHHHhhc
Q psy1991         313 PYQCGWKGCGWKFARSDELTRHFRK-HTGDRPFQCTLCERAFSRSDHLSLHMKR  365 (366)
Q Consensus       313 pf~C~i~~CgKsF~sk~~L~~H~rt-HtgeKpykC~~CgKsFs~kssLk~H~Kt  365 (366)
                      ||.|  ..|++.|.+...|+.|++. |.+   +.|+.||+.|.   .|..|+++
T Consensus         1 py~C--~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKC--PICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccC--CCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---Chhhhhcc
Confidence            5889  5599999999999999984 653   58999999998   47888765

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.45  E-value=0.0021  Score=39.04  Aligned_cols=23  Identities=43%  Similarity=0.993  Sum_probs=15.0

Q ss_pred             eecCCCCCCCcccChHHHHHHhhhh
Q psy1991         314 YQCGWKGCGWKFARSDELTRHFRKH  338 (366)
Q Consensus       314 f~C~i~~CgKsF~sk~~L~~H~rtH  338 (366)
                      |.|+  .|++.|.++..|.+|++.|
T Consensus         1 y~C~--~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCP--ICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEET--TTTEEESSHHHHHHHHHHH
T ss_pred             CCCC--CCCCccCCHHHHHHHHhHC
Confidence            5663  3777777777777776654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.43  E-value=0.0011  Score=65.96  Aligned_cols=54  Identities=30%  Similarity=0.617  Sum_probs=47.1

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHHh-hc------------------CCCceecCCCCCCCcccChHHHHHHhh
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLRT-HT------------------GEKPYQCGWKGCGWKFARSDELTRHFR  336 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~rt-H~------------------~eKpf~C~i~~CgKsF~sk~~L~~H~r  336 (366)
                      .+.++|+.++|.|.+++...|+.|+.- |.                  ..|||+|++  |+|+++.-..|+-|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCev--C~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEV--CDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccc--cchhhccCccceeccc
Confidence            378999999999999999999999875 41                  248999977  9999999999999865

>smart00355 ZnF_C2H2 zinc finger

Probab=96.24  E-value=0.0027  Score=38.41  Aligned_cols=23  Identities=30%  Similarity=0.807  Sum_probs=15.6

Q ss_pred             eecCccccccCChhHHHHHhhcC
Q psy1991         344 FQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       344 ykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |+|..|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            45777777777777777776654

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.21  E-value=0.0057  Score=45.31  Aligned_cols=49  Identities=35%  Similarity=0.608  Sum_probs=37.9

Q ss_pred             eeeecCCCCCcccCchhHHHHHHh-hcCC-CceecCCCCCCCcccChHHHHHHhhhhc
Q psy1991         284 HTCSHNGCGKTYTKSSHLKAHLRT-HTGE-KPYQCGWKGCGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       284 H~C~~~~CgK~F~skssLk~H~rt-H~~e-Kpf~C~i~~CgKsF~sk~~L~~H~rtHt  339 (366)
                      +.|+.  |++ -.+...|..|... |..+ +.+.|++  |...+.  .+|.+|++.++
T Consensus         3 f~CP~--C~~-~~~~~~L~~H~~~~H~~~~~~v~CPi--C~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPY--CGK-GFSESSLVEHCEDEHRSESKNVVCPI--CSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCC--CCC-ccCHHHHHHHHHhHCcCCCCCccCCC--chhhhh--hHHHHHHHHhc
Confidence            56777  999 4557899999776 6554 5799977  998755  49999998764

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=95.95  E-value=0.0049  Score=49.04  Aligned_cols=25  Identities=4%  Similarity=-0.238  Sum_probs=0.0

Q ss_pred             ccccccccccchhHhHhhhhccccC
Q psy1991         233 SHGNYNKLHIHPYYQTHHHTQIFQT  257 (366)
Q Consensus       233 iC~~CGK~F~~~~~L~hHh~~iH~~  257 (366)
                      .|..|+..|.+...+..|-...|.-
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~   25 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGF   25 (100)
T ss_dssp             -------------------------
T ss_pred             Ccccccccccccccccccccccccc
Confidence            3888999988888877676666653

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=95.91  E-value=0.0072  Score=36.16  Aligned_cols=23  Identities=43%  Similarity=0.937  Sum_probs=13.8

Q ss_pred             eecCCCCCCCcccChHHHHHHhhhh
Q psy1991         314 YQCGWKGCGWKFARSDELTRHFRKH  338 (366)
Q Consensus       314 f~C~i~~CgKsF~sk~~L~~H~rtH  338 (366)
                      |.|++  |++.|.+...|+.|+++|
T Consensus         1 ~~C~~--C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPI--CGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SS--TS-EESSHHHHHHHHHHH
T ss_pred             CCCcC--CCCcCCcHHHHHHHHHhh
Confidence            46644  777777777777776655

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=95.19  E-value=0.015  Score=36.69  Aligned_cols=25  Identities=36%  Similarity=0.850  Sum_probs=19.4

Q ss_pred             ceecCCCCCCCcccChHHHHHHhhhhc
Q psy1991         313 PYQCGWKGCGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       313 pf~C~i~~CgKsF~sk~~L~~H~rtHt  339 (366)
                      +|.|  ..|++.|.+...|..|++.|.
T Consensus         1 ~~~C--~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFEC--DECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEE--TTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCC--CccCCccCChhHHHHHhHHhc
Confidence            4778  448888888888888887774

>PRK04860 hypothetical protein; Provisional

Probab=94.73  E-value=0.018  Score=52.20  Aligned_cols=38  Identities=29%  Similarity=0.673  Sum_probs=26.7

Q ss_pred             ceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCCh
Q psy1991         313 PYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRS  356 (366)
Q Consensus       313 pf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~k  356 (366)
                      +|.|  . |++   ....+++|.++|+++++|.|..|++.|...
T Consensus       119 ~Y~C--~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRC--K-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEc--C-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            5777  4 766   566677777777777777777777776544

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=94.57  E-value=0.017  Score=35.72  Aligned_cols=22  Identities=32%  Similarity=0.916  Sum_probs=14.3

Q ss_pred             eecCccccccCChhHHHHHhhc
Q psy1991         344 FQCTLCERAFSRSDHLSLHMKR  365 (366)
Q Consensus       344 ykC~~CgKsFs~kssLk~H~Kt  365 (366)
                      |.|.+|++.|.....|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666653

>KOG2231|consensus

Probab=94.37  E-value=0.033  Score=60.40  Aligned_cols=67  Identities=30%  Similarity=0.676  Sum_probs=42.4

Q ss_pred             eecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCC------CcccChHHHHHHhhhhcCCCCeecC--ccc-cccCCh
Q psy1991         286 CSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCG------WKFARSDELTRHFRKHTGDRPFQCT--LCE-RAFSRS  356 (366)
Q Consensus       286 C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~Cg------KsF~sk~~L~~H~rtHtgeKpykC~--~Cg-KsFs~k  356 (366)
                      |..  |...|-....|.+|++.++    |.|.+  |+      .-|.....|..|-|.++    |.|+  .|- +.|...
T Consensus       185 C~~--C~~~fld~~el~rH~~~~h----~~chf--C~~~~~~neyy~~~~dLe~HfR~~H----flCE~~~C~~~~f~~~  252 (669)
T KOG2231|consen  185 CKF--CHERFLDDDELYRHLRFDH----EFCHF--CDYKTGQNEYYNDYDDLEEHFRKGH----FLCEEEFCRTKKFYVA  252 (669)
T ss_pred             chh--hhhhhccHHHHHHhhccce----eheee--cCcccccchhcccchHHHHHhhhcC----ccccccccccceeeeh
Confidence            555  8888888888888877643    44544  43      34666777888877544    6776  563 445544


Q ss_pred             hHHHHHhh
Q psy1991         357 DHLSLHMK  364 (366)
Q Consensus       357 ssLk~H~K  364 (366)
                      ..+..|++
T Consensus       253 ~~~ei~lk  260 (669)
T KOG2231|consen  253 FELEIELK  260 (669)
T ss_pred             hHHHHHHH
Confidence            45555544

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=93.60  E-value=0.043  Score=41.07  Aligned_cols=40  Identities=25%  Similarity=0.494  Sum_probs=21.2

Q ss_pred             HHHHHh-hcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCC
Q psy1991         302 KAHLRT-HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP  343 (366)
Q Consensus       302 k~H~rt-H~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKp  343 (366)
                      ..+.+. +..+.|-.|++  |+..+.+..+|++|+..+++.||
T Consensus        12 ~~~~k~~~~S~~PatCP~--C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPI--CGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ----CCCCTTS--EE-TT--T--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhHHHHhhccCCCCCCCc--chhhccchhhHHHHHHHHhcccC
Confidence            334433 34567788855  88888888888888877666665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=93.36  E-value=0.07  Score=31.94  Aligned_cols=24  Identities=38%  Similarity=0.814  Sum_probs=15.2

Q ss_pred             eecCCCCCCCcccChHHHHHHhhhhc
Q psy1991         314 YQCGWKGCGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       314 f~C~i~~CgKsF~sk~~L~~H~rtHt  339 (366)
                      |.|  ..|++.|.....|..|++.|.
T Consensus         1 ~~C--~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRC--PECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCC--CCCcchhCCHHHHHHHHHHhc
Confidence            356  337777777777777766553

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.84  E-value=0.054  Score=52.34  Aligned_cols=55  Identities=20%  Similarity=0.140  Sum_probs=37.0

Q ss_pred             CcccccccccccchhHhHhhhhc-cccCCC-CccccC--CCCCccccchhhhcccceee
Q psy1991         231 SSSHGNYNKLHIHPYYQTHHHTQ-IFQTPS-ITIKSS--LLSKPKRRQNWSRRKIIMHT  285 (366)
Q Consensus       231 P~iC~~CGK~F~~~~~L~hHh~~-iH~~p~-~~~kC~--~Csk~f~~k~~l~~H~k~H~  285 (366)
                      +..|..|.+.|.....+..|... .|.... ..+.|.  .|++.+.+...+.+|...|.
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  347 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHT  347 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCccccc
Confidence            57788888888888777755543 555442 455666  67777777777777765543

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=92.52  E-value=0.052  Score=34.50  Aligned_cols=22  Identities=41%  Similarity=0.889  Sum_probs=15.7

Q ss_pred             eecCccccccCChhHHHHHhhc
Q psy1991         344 FQCTLCERAFSRSDHLSLHMKR  365 (366)
Q Consensus       344 ykC~~CgKsFs~kssLk~H~Kt  365 (366)
                      |.|..|++.|.....|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5677777777777777777654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=91.77  E-value=0.067  Score=40.05  Aligned_cols=34  Identities=21%  Similarity=0.527  Sum_probs=20.6

Q ss_pred             HHHhhh-hcCCCCeecCccccccCChhHHHHHhhc
Q psy1991         332 TRHFRK-HTGDRPFQCTLCERAFSRSDHLSLHMKR  365 (366)
Q Consensus       332 ~~H~rt-HtgeKpykC~~CgKsFs~kssLk~H~Kt  365 (366)
                      ..+.+. +..+.|-.|++|+..+.+..+|++|+.+
T Consensus        12 ~~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~   46 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEI   46 (54)
T ss_dssp             ----CCCCTTS--EE-TTT--EESSHHHHHHHHHH
T ss_pred             hhHHHHhhccCCCCCCCcchhhccchhhHHHHHHH
Confidence            344433 4457889999999999999999999853

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=91.40  E-value=0.11  Score=32.00  Aligned_cols=21  Identities=33%  Similarity=0.757  Sum_probs=11.5

Q ss_pred             eecCccccccCChhHHHHHhhc
Q psy1991         344 FQCTLCERAFSRSDHLSLHMKR  365 (366)
Q Consensus       344 ykC~~CgKsFs~kssLk~H~Kt  365 (366)
                      |+|+.|+-... +..|.+|+++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~   21 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKR   21 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHh
Confidence            45666666555 6666666654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=90.96  E-value=0.17  Score=31.10  Aligned_cols=23  Identities=26%  Similarity=0.738  Sum_probs=17.3

Q ss_pred             eecCCCCCCCcccChHHHHHHhhhh
Q psy1991         314 YQCGWKGCGWKFARSDELTRHFRKH  338 (366)
Q Consensus       314 f~C~i~~CgKsF~sk~~L~~H~rtH  338 (366)
                      |.|.+  |++.|.+...|+.|++.+
T Consensus         1 ~~C~~--C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDI--CNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETT--TTEEESSHHHHHHHHTTH
T ss_pred             CCCCC--CCCCcCCHHHHHHHHCcC
Confidence            56755  888888888888887643

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=89.54  E-value=0.24  Score=31.44  Aligned_cols=20  Identities=40%  Similarity=0.860  Sum_probs=13.2

Q ss_pred             eecCccccccCChhHHHHHhh
Q psy1991         344 FQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       344 ykC~~CgKsFs~kssLk~H~K  364 (366)
                      ..|+.||++| ..+.|.+|++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            3577777777 5566667764

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=88.84  E-value=0.21  Score=48.31  Aligned_cols=132  Identities=23%  Similarity=0.262  Sum_probs=89.0

Q ss_pred             CCcccc--cccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhh-----------cccceeeeecCCCCCccc
Q psy1991         230 NSSSHG--NYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSR-----------RKIIMHTCSHNGCGKTYT  296 (366)
Q Consensus       230 ~P~iC~--~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~-----------~H~k~H~C~~~~CgK~F~  296 (366)
                      .|+.|+  .|++.|.....+..|.............-..+.+.+.......           .......+....|.+.+.
T Consensus       320 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (467)
T COG5048         320 KPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFK  399 (467)
T ss_pred             CceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccCCCCccchhhccCccCCccccccccchhhhhc
Confidence            688999  8999999998887665554444433333333333333222211           111233366667999999


Q ss_pred             CchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHH
Q psy1991         297 KSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLH  362 (366)
Q Consensus       297 skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H  362 (366)
                      +...+..|...|...+...|....|.+.|.....+..|++.|....++.|..+ +.|.....+..|
T Consensus       400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  464 (467)
T COG5048         400 RDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSIL-KSFRRDLDLSNH  464 (467)
T ss_pred             cccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCceeeccc-cccchhhhhhcc
Confidence            99999999988888776665557799999999999999999987777766644 444444444443

>PRK04860 hypothetical protein; Provisional

Probab=87.18  E-value=0.54  Score=42.69  Aligned_cols=40  Identities=23%  Similarity=0.516  Sum_probs=31.3

Q ss_pred             eeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChH
Q psy1991         284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSD  329 (366)
Q Consensus       284 H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~  329 (366)
                      |...|. |++   ....+++|.++|.++++|.|  ..|++.|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC--~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRC--RRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEEC--CCCCceeEEec
Confidence            333343 776   66789999999999999999  66999887543

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=86.71  E-value=0.59  Score=28.60  Aligned_cols=23  Identities=30%  Similarity=0.910  Sum_probs=14.4

Q ss_pred             eecCCCCCCCcccChHHHHHHhhhhc
Q psy1991         314 YQCGWKGCGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       314 f~C~i~~CgKsF~sk~~L~~H~rtHt  339 (366)
                      |+|..  |+.... +..|.+|++.|+
T Consensus         1 y~C~~--C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPH--CSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SS--SS-EES-HHHHHHHHHHHH
T ss_pred             CCCCC--CCCcCC-HHHHHHHHHhhC
Confidence            56744  777776 777888877654

>smart00451 ZnF_U1 U1-like zinc finger

Probab=86.27  E-value=0.56  Score=30.92  Aligned_cols=22  Identities=32%  Similarity=0.720  Sum_probs=15.5

Q ss_pred             CeecCccccccCChhHHHHHhh
Q psy1991         343 PFQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       343 pykC~~CgKsFs~kssLk~H~K  364 (366)
                      +|.|+.|++.|.....+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4667777777777777777764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=84.80  E-value=0.39  Score=30.41  Aligned_cols=22  Identities=23%  Similarity=0.688  Sum_probs=17.6

Q ss_pred             eecCCCCCCCcccChHHHHHHhhh
Q psy1991         314 YQCGWKGCGWKFARSDELTRHFRK  337 (366)
Q Consensus       314 f~C~i~~CgKsF~sk~~L~~H~rt  337 (366)
                      |.|.+  |++.|.+...|..|++.
T Consensus         2 ~~C~~--C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDA--CDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTT--TTBBBSSHHHHHCCTTS
T ss_pred             CCccc--CCCCcCCHHHHHHHHcc
Confidence            67854  88888888888888774

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG1146|consensus

Probab=83.20  E-value=0.42  Score=55.31  Aligned_cols=72  Identities=22%  Similarity=0.559  Sum_probs=51.9

Q ss_pred             CCCcccCchhHHHHHHh-hcCCCceecCCCCCCCcccChHHHHHHhhh-hc------------------------CCCCe
Q psy1991         291 CGKTYTKSSHLKAHLRT-HTGEKPYQCGWKGCGWKFARSDELTRHFRK-HT------------------------GDRPF  344 (366)
Q Consensus       291 CgK~F~skssLk~H~rt-H~~eKpf~C~i~~CgKsF~sk~~L~~H~rt-Ht------------------------geKpy  344 (366)
                      |+..+.++..+..|+.. |.-.+.++|  +.|+..|+....|..|||. |.                        +.++|
T Consensus       442 ~e~~~~s~r~~~~~t~~L~S~~kt~~c--pkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~  519 (1406)
T KOG1146|consen  442 AEPLLESKRSLEGQTVVLHSFFKTLKC--PKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPY  519 (1406)
T ss_pred             hhhhhhhhcccccceeeeecccccccC--CccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcc
Confidence            55555566666666554 555567777  4477777777777777775 21                        24679


Q ss_pred             ecCccccccCChhHHHHHhh
Q psy1991         345 QCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       345 kC~~CgKsFs~kssLk~H~K  364 (366)
                      .|..|...+..+.+|.+|++
T Consensus       520 ~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  520 PCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             cceeeeeeeecchHHHHHHH
Confidence            99999999999999999986

>KOG2482|consensus

Probab=82.60  E-value=1.4  Score=44.80  Aligned_cols=49  Identities=22%  Similarity=0.431  Sum_probs=36.2

Q ss_pred             eecCCCCCCCcccChHHHHHHhhh-hcC--------------------------CCCeecCccccccCChhHHHHHhh
Q psy1991         314 YQCGWKGCGWKFARSDELTRHFRK-HTG--------------------------DRPFQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       314 f~C~i~~CgKsF~sk~~L~~H~rt-Htg--------------------------eKpykC~~CgKsFs~kssLk~H~K  364 (366)
                      .+|-+  |.....+...|..||.. |.-                          .+.-.|-.|.-.|.....|..||.
T Consensus       280 v~CLf--C~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~  355 (423)
T KOG2482|consen  280 VVCLF--CTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMV  355 (423)
T ss_pred             eEEEe--eccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcc
Confidence            47866  88888888899999874 420                          112357778889999999999875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	366
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-38
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-38
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		8e-35
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-22
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		3e-19
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		6e-18
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-16
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		2e-15
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-15
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-15
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		4e-15
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		4e-15
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		6e-15
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		7e-15
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		1e-14
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		3e-14
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-12
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-12
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-11
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		5e-11
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-10
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-10
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		3e-10
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		4e-09
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		5e-09
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		1e-08
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		2e-08
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		4e-08
2ent_A	48	Solution Structure Of The Second C2h2-Type Zinc Fin		6e-08
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		5e-07
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		2e-04
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		1e-06
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		1e-06
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		3e-06
1p7a_A	37	Solution Stucture Of The Third Zinc Finger From Bkl		8e-06
1un6_B	87	The Crystal Structure Of A Zinc Finger - Rna Comple		1e-05
2j7j_A	85	Invariance Of The Zinc Finger Module: A Comparison		1e-05
1u86_A	35	321-Tw-322 Insertion Mutant Of The Third Zinc Finge		7e-05
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		7e-05
1u85_A	33	Arg326-Trp Mutant Of The Third Zinc Finger Of Bklf		2e-04
1va1_A	37	Solution Structure Of Transcription Factor Sp1 Dna		2e-04
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		2e-04
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		3e-04
1sp2_A	31	Nmr Structure Of A Zinc Finger Domain From Transcri		5e-04

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score =  157 bits (396), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 71/88 (80%), Positives = 77/88 (87%)
Query: 279 RKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKH 338
           ++   HTC + GCGKTYTKSSHLKAHLRTHTGEKPY C W GCGWKFARSDELTRH+RKH
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 339 TGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           TG RPFQC  C+RAFSRSDHL+LHMKRH
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score =  156 bits (395), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 71/87 (81%), Positives = 76/87 (87%)
Query: 280 KIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHT 339
           +   HTC + GCGKTYTKSSHLKAHLRTHTGEKPY C W GCGWKFARSDELTRH+RKHT
Sbjct: 3   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 62
Query: 340 GDRPFQCTLCERAFSRSDHLSLHMKRH 366
           G RPFQC  C+RAFSRSDHL+LHMKRH
Sbjct: 63  GHRPFQCQKCDRAFSRSDHLALHMKRH 89

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score =  144 bits (363), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 65/87 (74%), Positives = 75/87 (86%)
Query: 280 KIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHT 339
           K  +H C + GC K YTKSSHLKAHLRTHTGEKPY+C W+GC W+FARSDELTRH+RKHT
Sbjct: 12  KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHT 71
Query: 340 GDRPFQCTLCERAFSRSDHLSLHMKRH 366
           G +PFQC +C R+FSRSDHL+LHMKRH
Sbjct: 72  GAKPFQCGVCNRSFSRSDHLALHMKRH 98

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 48/81 (59%), Positives = 59/81 (72%)
Query: 286 CSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQ 345
           C++ GC K Y K SHL+ H R HTGEKPYQC +K C  +F+RSD+L RH R+HTG +PFQ
Sbjct: 9   CAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQ 68
Query: 346 CTLCERAFSRSDHLSLHMKRH 366
           C  C+R FSRSDHL  H + H
Sbjct: 69  CKTCQRKFSRSDHLKTHTRTH 89

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/59 (72%), Positives = 47/59 (79%)
Query: 280 KIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKH 338
           +I  H CSH GCGKTY KSSHLKAH RTHTGEKP+ C WKGC  +FARSDEL+RH R H
Sbjct: 14  RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 88.2 bits (217), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 58/76 (76%), Gaps = 2/76 (2%)
Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCE 350
           CGK++++SS+L+ H RTHTGEKPY+C    CG  F++S +L +H R HTG++P++C  C 
Sbjct: 10  CGKSFSQSSNLQKHQRTHTGEKPYKCPE--CGKSFSQSSDLQKHQRTHTGEKPYKCPECG 67
Query: 351 RAFSRSDHLSLHMKRH 366
           ++FSRSDHLS H + H
Sbjct: 68  KSFSRSDHLSRHQRTH 83

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCE 350
           CGK++++ +HL+AH RTHTGEKPY+C    CG  F+R D L  H R HTG++P++C  C 
Sbjct: 111 CGKSFSQLAHLRAHQRTHTGEKPYKCPE--CGKSFSREDNLHTHQRTHTGEKPYKCPECG 168
Query: 351 RAFSRSDHLSLHMKRH 366
           ++FSR D L++H + H
Sbjct: 169 KSFSRRDALNVHQRTH 184

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 285 TCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF 344
            C    C + ++ SS+L  H+R HTG+KP+QC  + C   F+RSD LT H R HTG++PF
Sbjct: 6   ACPVESCDRRFSDSSNLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 345 QCTLCERAFSRSDHLSLHMKRH 366
            C +C R F+RSD    H K H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 285 TCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF 344
            C    C + +++S+ L  H+R HTG+KP+QC  + C   F+RSD LT H R HTG++PF
Sbjct: 6   ACPVESCDRRFSRSAELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 345 QCTLCERAFSRSDHLSLHMKRH 366
            C +C R F+RSD    H K H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 285 TCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF 344
            C    C + +++S+ L  H+R HTG+KP+QC  + C   F+RSD LT H R HTG++PF
Sbjct: 6   ACPVESCDRRFSRSADLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 345 QCTLCERAFSRSDHLSLHMKRH 366
            C +C R F+RSD    H K H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 285 TCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF 344
            C    C + +++S  L  H+R HTG+KP+QC  + C   F+RSD LT H R HTG++PF
Sbjct: 6   ACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 345 QCTLCERAFSRSDHLSLHMKRH 366
            C +C R F+RSD    H K H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 285 TCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF 344
            C    C + +++S  L  H+R HTG+KP+QC  + C   F+RSD LT H R HTG++PF
Sbjct: 5   ACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPF 62
Query: 345 QCTLCERAFSRSDHLSLHMKRH 366
            C +C R F+RSD    H K H
Sbjct: 63  ACDICGRKFARSDERKRHTKIH 84

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 285 TCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF 344
            C    C + +++S  L  H+R HTG+KP+QC  + C   F+RSD LT H R HTG++PF
Sbjct: 6   ACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 345 QCTLCERAFSRSDHLSLHMKRH 366
            C +C R F+RSD    H K H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 285 TCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF 344
            C    C + +++S  L  H+R HTG+KP+QC  + C   F+RSD LT H R HTG++PF
Sbjct: 6   ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 345 QCTLCERAFSRSDHLSLHMKRH 366
            C +C R F+RSD    H K H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           +PY C  + C  +F+RSDELTRH R HTG +PFQC +C R FSRSDHL+ H++ H
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 10/102 (9%)
Query: 273 RQNWSRRKII------MHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFA 326
           R N + RK +      +H C+   CGK + +SS LK H   HTGEKP+QC ++GCG +F+
Sbjct: 18  RDNSAMRKHLHTHGPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFS 75
Query: 327 RSDELTRHFRKHTGDRPFQCTL--CERAFSRSDHLSLHMKRH 366
               L  H R HTGDRP+ C    C + F++S +L  H+  H
Sbjct: 76  LDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 292 GKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL--C 349
           GK++     L  H+R HTGEKP+ C + GCG  FARS+ L  H R HTG++PF+C    C
Sbjct: 69  GKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGC 128
Query: 350 ERAFSRSDHLSLHMKRH 366
           +R F+ S     HM  H
Sbjct: 129 DRRFANSSDRKKHMHVH 145

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCE 350
           CGK +++   LK H+R HTG KPY+C  K C +  A S  L +H R H+ +RPF+C +C 
Sbjct: 14  CGKCFSRKDKLKTHMRCHTGVKPYKC--KTCDYAAADSSSLNKHLRIHSDERPFKCQICP 71
Query: 351 RAFSRSDHLSLHMKRH 366
            A   S  L++H++ H
Sbjct: 72  YASRNSSQLTVHLRSH 87

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG--DRPFQCTL 348
           CGK +    HL  H  +H+GEKPY C    CG +F R D ++ H R H G   +P+ C  
Sbjct: 13  CGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQS 70
Query: 349 CERAFSRSDHLSLHMKR 365
           C + FSR DHL+ H+K+
Sbjct: 71  CGKGFSRPDHLNGHIKQ 87

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 285 TCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF 344
            C    C + +++ ++L  H+R HTG+KP+QC  + C   F++   L  H R HTG++PF
Sbjct: 6   ACPVESCDRRFSQKTNLDTHIRIHTGQKPFQC--RICMRNFSQQASLNAHIRTHTGEKPF 63
Query: 345 QCTLCERAFS----RSDHLSLHMK 364
            C +C R F+    R+ H  +H++
Sbjct: 64  ACDICGRKFATLHTRTRHTKIHLR 87

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 285 TCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF 344
            C    C + +++ ++L  H+R HTG+KP+QC  + C   F++   L +H R HTG++PF
Sbjct: 6   ACPVESCDRRFSQKTNLDTHIRIHTGQKPFQC--RICMRNFSQHTGLNQHIRTHTGEKPF 63
Query: 345 QCTLCERAFS----RSDHLSLHMK 364
            C +C R F+    R  H  +H++
Sbjct: 64  ACDICGRKFATLHTRDRHTKIHLR 87

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCE 350
           CGK++ +SS L  HL  H+  +PY C +  CG +F +  ++ +H   HTG++P +C +C 
Sbjct: 7   CGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQVCG 64
Query: 351 RAFSRSDHLSLHMKRH 366
           +AFS+S +L  H ++H
Sbjct: 65  KAFSQSSNLITHSRKH 80

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRH-FRKHTGDR 342
           H C+  GC K+Y++  +LK HLR+HTGEKPY C  +GC   F+ + +  +H  R H+ ++
Sbjct: 68  HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK 127
Query: 343 PFQCTL--CERAFSRSDHLSLHMK 364
           P+ C L  C + ++    L  H+K
Sbjct: 128 PYVCKLPGCTKRYTDPSSLRKHVK 151

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 286 CSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQ 345
           CS   CG  Y K+  L+AHL  HTGEKP+ C  +GC   F     LTRH   HTG++ F 
Sbjct: 6   CSFADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFT 65
Query: 346 C--TLCERAFSRSDHLSLHMKR 365
           C    C+  F+   ++  H  R
Sbjct: 66  CDSDGCDLRFTTKANMKKHFNR 87

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 286 CSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQ 345
           CS   CG  Y K+  L+AHL  HTGEKP+ C  +GC   F     LTRH   HTG++ F 
Sbjct: 15  CSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFT 74
Query: 346 C--TLCERAFSRSDHLSLHMKR 365
           C    C+  F+   ++  H  R
Sbjct: 75  CDSDGCDLRFTTKANMKKHFNR 96

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLH 362
           KP+QC  + C   F+RSD LT H R HTG++PF C +C R F+RSD    H
Sbjct: 2   KPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 50

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCE 350
           CG+ +TKS +L  H RTHT E+PY C    C   F R D L  H   H+ ++PF+C  C 
Sbjct: 23  CGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKPFKCQECG 80
Query: 351 RAFSRSDHLSLHMKRH 366
           + F +S  L++H   H
Sbjct: 81  KGFCQSRTLAVHKTLH 96

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCE 350
           CGK++T  S    H+  H G +PY CG   CG KF     L  H + HTG +P++C +C 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECNICA 72
Query: 351 RAFSRSDHLSLHM 363
           + F   D    H+
Sbjct: 73  KRFMWRDSFHRHV 85

>pdb|2ENT|A Chain A, Solution Structure Of The Second C2h2-Type Zinc Finger Domain From Human Krueppel-Like Factor 15 Length = 48

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP 343
           EKP+ C W GCGW+F+RSDEL+RH R H+G +P
Sbjct: 10  EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP 42

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 275 NWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRH 334
            W +R+   + C  + CGK+++ SS L  H RTHTGEKPY+C    CG  F +   L  H
Sbjct: 10  EWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQRSHLIGH 65
Query: 335 FRKHTGDRP 343
            R HTG  P
Sbjct: 66  HRVHTGSGP 74

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 321 CGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           CG  F+ S +L++H R HTG++P++C  C +AF +  HL  H + H
Sbjct: 24  CGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           EKPY C    CG  F+RS  L +H R HTG++P++C  C +AFS++  L  H + H
Sbjct: 12  EKPYGCVE--CGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP---FQCT 347
           C K +    +LK H R HTGEKP++C    CG  + R + L  H  ++  +R    F C+
Sbjct: 13  CHKKFLSKYYLKVHNRKHTGEKPFEC--PKCGKCYFRKENLLEHEARNCMNRSEQVFTCS 70
Query: 348 LCERAFSRSDHLSLHMKRH 366
           +C+  F R   L LHM  H
Sbjct: 71  VCQETFRRRMELRLHMVSH 89

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 321 CGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKR 365
           C   FAR + L RH+R HT ++P+ C LC RAF+R D L  H ++
Sbjct: 8   CTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQK 52

>pdb|1P7A|A Chain A, Solution Stucture Of The Third Zinc Finger From Bklf Length = 37

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/31 (67%), Positives = 25/31 (80%)
Query: 336 RKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           R  TG +PFQC  C+R+FSRSDHL+LH KRH
Sbjct: 4   RGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>pdb|1UN6|B Chain B, The Crystal Structure Of A Zinc Finger - Rna Complex Reveals Two Modes Of Molecular Recognition Length = 87

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 283 MHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
           M+ C    CGK + K + LK H  +HT + PY+C  +GC  +F+    L RH + H G
Sbjct: 1   MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58

>pdb|2J7J|A Chain A, Invariance Of The Zinc Finger Module: A Comparison Of The Free Structure With Those In Nucleic-Acid Complexes Length = 85

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 283 MHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
           M+ C    CGK + K + LK H  +HT + PY+C  +GC  +F+    L RH + H G
Sbjct: 1   MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58

>pdb|1U86|A Chain A, 321-Tw-322 Insertion Mutant Of The Third Zinc Finger Of Bklf Length = 35

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/30 (70%), Positives = 25/30 (83%), Gaps = 2/30 (6%)
Query: 339 TGDRPFQCTL--CERAFSRSDHLSLHMKRH 366
           TG +PFQCT   C+R+FSRSDHL+LH KRH
Sbjct: 3   TGIKPFQCTWPDCDRSFSRSDHLALHRKRH 32

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCE 350
           C ++Y   + L+ H   H+ EK Y C +  C   F  ++  T+H   HTG+R +QC  C 
Sbjct: 28  CKRSYVCLTSLRRHFNIHSWEKKYPCRY--CEKVFPLAEYRTKHEIHHTGERRYQCLACG 85
Query: 351 RAFSRSDHLSLHMK 364
           ++F     +S H+K
Sbjct: 86  KSFINYQFMSSHIK 99

>pdb|1U85|A Chain A, Arg326-Trp Mutant Of The Third Zinc Finger Of Bklf Length = 33

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 339 TGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           TG +PFQC  C+ +FSRSDHL+LH KRH
Sbjct: 3   TGIKPFQCPDCDWSFSRSDHLALHRKRH 30

>pdb|1VA1|A Chain A, Solution Structure Of Transcription Factor Sp1 Dna Binding Domain (Zinc Finger 1) Length = 37

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEK 312
           H C   GCGK Y K+SHL+AHLR HTGE+
Sbjct: 9   HICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP 343
           C  ++    +L +H   HTGEKPY+C    CG +F R   L  H R H+G++P
Sbjct: 23  CQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKP 73

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKH 338
           CGK +  + +L  HLRTHTGEKPY+C +  C +  A+   L  H  +H
Sbjct: 10  CGKFFRSNYYLNIHLRTHTGEKPYKCEF--CEYAAAQKTSLRYHLERH 55

>pdb|1SP2|A Chain A, Nmr Structure Of A Zinc Finger Domain From Transcription Factor Sp1f2, Minimized Average Structure Length = 31

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDR 342
           +P+ C W  CG +F RSDEL RH R HTG++
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	366
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-52
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-52
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-18
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-41
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-37
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-17
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-36
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-29
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-18
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-32
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-22
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-31
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-19
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-17
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	8e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	7e-29
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-26
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	7e-22
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	9e-14
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-28
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-25
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-24
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-22
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-19
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-28
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-26
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-23
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-16
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-11
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-26
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-18
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-17
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-26
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	9e-18
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-26
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-26
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-15
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-11
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-26
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-24
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-23
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	8e-19
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-25
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	6e-20
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-13
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-25
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-15
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	8e-25
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-23
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-16
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-04
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-24
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-21
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-18
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-24
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-24
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-24
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-15
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-23
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-15
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-22
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-20
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-18
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-21
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-14
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-20
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-16
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-19
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	8e-16
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-19
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-19
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-19
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-17
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-18
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-16
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-17
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-17
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	7e-16
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	1e-15
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	1e-15
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	4e-07
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	6e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	9e-14
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-13
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-06
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	4e-13
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-12
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	1e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-12
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-09
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-07
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-12
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-12
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-12
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-09
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-12
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-12
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-12
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-09
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-12
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-12
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-12
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-09
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-12
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-09
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-12
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-09
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-12
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-09
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	8e-12
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	5e-09
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-05
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-12
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-09
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-12
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-12
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	8e-12
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-12
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-12
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-12
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-12
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-11
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-11
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-11
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-11
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-11
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-11
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-09
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-11
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-11
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-09
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-11
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-09
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	7e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-11
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-11
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-11
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-11
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-11
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-11
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-09
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-11
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	7e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-09
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-09
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-09
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-11
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-11
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-09
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-11
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-11
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-09
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	3e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-11
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-11
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-09
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-11
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-11
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-11
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-11
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-11
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-11
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-09
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	5e-11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-11
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-09
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-11
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	6e-11
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	7e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-11
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-11
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-11
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-10
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-07
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-10
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-09
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-10
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-10
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-10
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-09
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	9e-10
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	4e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-09
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-08
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-09
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	7e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-09
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-09
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-09
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	5e-09
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-06
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	1e-08
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-07
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	4e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-07
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	6e-06
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-07
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	9e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-07
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	4e-07
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	4e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	6e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-05
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	1e-05
1ard_A	29	Yeast transcription factor ADR1; transcription reg	4e-05
1ard_A	29	Yeast transcription factor ADR1; transcription reg	2e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	7e-04
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	6e-05
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	6e-05
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	1e-04
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	7e-04
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	5e-04

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score =  168 bits (427), Expect = 1e-52
 Identities = 71/83 (85%), Positives = 75/83 (90%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP 343
           HTC + GCGKTYTKSSHLKAHLRTHTGEKPY C W GCGWKFARSDELTRH+RKHTG RP
Sbjct: 6   HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP 65

Query: 344 FQCTLCERAFSRSDHLSLHMKRH 366
           FQC  C+RAFSRSDHL+LHMKRH
Sbjct: 66  FQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 8/30 (26%), Positives = 14/30 (46%)

Query: 337 KHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           K T         C + +++S HL  H++ H
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTH 30

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score =  168 bits (427), Expect = 2e-52
 Identities = 65/94 (69%), Positives = 75/94 (79%)

Query: 273 RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELT 332
                  K  +H C + GC K YTKSSHLKAHLRTHTGEKPY+C W+GC W+FARSDELT
Sbjct: 5   SSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELT 64

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           RH+RKHTG +PFQC +C R+FSRSDHL+LHMKRH
Sbjct: 65  RHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 77.3 bits (191), Expect = 6e-18
 Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 286 CSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHT 339
           C+  GC   + +S  L  H R HTG KP+QC    C   F+RSD L  H ++H 
Sbjct: 48  CTWEGCDWRFARSDELTRHYRKHTGAKPFQC--GVCNRSFSRSDHLALHMKRHQ 99

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score =  138 bits (351), Expect = 2e-41
 Identities = 24/83 (28%), Positives = 36/83 (43%)

Query: 283 MHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDR 342
           M+ C    CGK + K + LK H  +HT + PY+C  +GC  +F+    L RH + H G  
Sbjct: 1   MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60

Query: 343 PFQCTLCERAFSRSDHLSLHMKR 365
             +   C            H+  
Sbjct: 61  CKKDDSCSFVGKTWTLYLKHVAE 83

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score =  127 bits (321), Expect = 6e-37
 Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 2/70 (2%)

Query: 297 KSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRS 356
             ++L  ++      +PY C  + C  +F+RSDELTRH R HTG +PFQC +C R FSRS
Sbjct: 5   PMNNLLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRS 62

Query: 357 DHLSLHMKRH 366
           DHL+ H++ H
Sbjct: 63  DHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 74.3 bits (183), Expect = 4e-17
 Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)

Query: 286 CSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHT 339
           C    C + +++S  L  H+R HTG+KP+QC  + C   F+RSD LT H R HT
Sbjct: 22  CPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHT 73

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  126 bits (318), Expect = 5e-36
 Identities = 48/83 (57%), Positives = 59/83 (71%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP 343
             C++ GC K Y K SHL+ H R HTGEKPYQC +K C  +F+RSD+L RH R+HTG +P
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 344 FQCTLCERAFSRSDHLSLHMKRH 366
           FQC  C+R FSRSDHL  H + H
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTH 89

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  108 bits (272), Expect = 3e-29
 Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 4/85 (4%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP 343
           + C    C + +++S  LK H R HTG KP+QC  K C  KF+RSD L  H R HTG++P
Sbjct: 37  YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQC--KTCQRKFSRSDHLKTHTRTHTGEKP 94

Query: 344 FQCTL--CERAFSRSDHLSLHMKRH 366
           F C    C++ F+RSD L  H   H
Sbjct: 95  FSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 79.9 bits (198), Expect = 1e-18
 Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 2/60 (3%)

Query: 309 TGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL--CERAFSRSDHLSLHMKRH 366
           + ++P+ C + GC  ++ +   L  H RKHTG++P+QC    CER FSRSD L  H +RH
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score =  114 bits (288), Expect = 3e-32
 Identities = 47/75 (62%), Positives = 52/75 (69%), Gaps = 4/75 (5%)

Query: 264 SSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGW 323
           SS  S P+   +  R     H CSH GCGKTY KSSHLKAH RTHTGEKP+ C WKGC  
Sbjct: 2   SSGSSGPQIDSSRIR----SHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCER 57

Query: 324 KFARSDELTRHFRKH 338
           +FARSDEL+RH R H
Sbjct: 58  RFARSDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 89.0 bits (221), Expect = 1e-22
 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 298 SSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL--CERAFSR 355
           SS         +  + + C   GCG  + +S  L  H R HTG++PF C+   CER F+R
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 356 SDHLSLHMKRH 366
           SD LS H + H
Sbjct: 62  SDELSRHRRTH 72

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score =  112 bits (283), Expect = 4e-31
 Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 2/83 (2%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP 343
           + C    C + +++S  L  H+R HTG+KP+QC  + C   F+RSD LT H R HTG++P
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 344 FQCTLCERAFSRSDHLSLHMKRH 366
           F C +C R F+RSD    H K H
Sbjct: 63  FACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 80.2 bits (199), Expect = 4e-19
 Identities = 30/56 (53%), Positives = 40/56 (71%)

Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           E+PY C  + C  +F++S  LTRH R HTG +PFQC +C R FSRSDHL+ H++ H
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 57

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 75.2 bits (186), Expect = 2e-17
 Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 2/50 (4%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
           C + +++S HL  H+RTHTGEKP+ C    CG KFARSDE  RH + H  
Sbjct: 40  CMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRHTKIHLR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 42.8 bits (102), Expect = 8e-06
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEK 312
           CG+ + +S   K H + H  +K
Sbjct: 68  CGRKFARSDERKRHTKIHLRQK 89

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  107 bits (270), Expect = 7e-29
 Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 4/85 (4%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP 343
           H C+   CGK + +SS LK H   HTGEKP+QC ++GCG +F+    L  H R HTGDRP
Sbjct: 35  HVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP 92

Query: 344 FQCTL--CERAFSRSDHLSLHMKRH 366
           + C    C + F++S +L  H+  H
Sbjct: 93  YVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  101 bits (254), Expect = 1e-26
 Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 5/85 (5%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP 343
             C H GC K +  +S ++ HL TH G + + C    CG  F  S +L RH   HTG++P
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVC--AECGKAFVESSKLKRHQLVHTGEKP 62

Query: 344 FQCTL--CERAFSRSDHLSLHMKRH 366
           FQCT   C + FS   +L  H++ H
Sbjct: 63  FQCTFEGCGKRFSLDFNLRTHVRIH 87

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 88.7 bits (221), Expect = 7e-22
 Identities = 24/62 (38%), Positives = 35/62 (56%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP 343
             C+  GCGK ++   +L+ H+R HTG++PY C + GC  KFA+S  L  H   H   + 
Sbjct: 63  FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN 122

Query: 344 FQ 345
            Q
Sbjct: 123 NQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 66.4 bits (163), Expect = 9e-14
 Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 1/56 (1%)

Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
            +   C  KGC   F  +  + +H   H G R   C  C +AF  S  L  H   H
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVH 57

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  107 bits (269), Expect = 6e-28
 Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 2/83 (2%)

Query: 286 CSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQ 345
           CS   CG  Y K+  L+AHL  HTGEKP+ C  +GC   F     LTRH   HTG++ F 
Sbjct: 15  CSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFT 74

Query: 346 CT--LCERAFSRSDHLSLHMKRH 366
           C    C+  F+   ++  H  R 
Sbjct: 75  CDSDGCDLRFTTKANMKKHFNRF 97

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 99.2 bits (248), Expect = 5e-25
 Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 10/94 (10%)

Query: 283 MHT------CSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFR 336
            HT      C   GC K +T   HL  H  THTGEK + C   GC  +F     + +HF 
Sbjct: 36  KHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFN 95

Query: 337 KHTG--DRPFQCTL--CERAFSRSDHLSLHMKRH 366
           +        + C    C +AF + + L +H   H
Sbjct: 96  RFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH 129

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 97.3 bits (243), Expect = 3e-24
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)

Query: 286 CSHNGCGKTYTKSSHLKAHLRTHTGEK--PYQCGWKGCGWKFARSDELTRHFRKHTGDRP 343
           C  +GC   +T  +++K H       K   Y C ++ CG  F + ++L  H   HT   P
Sbjct: 75  CDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLP 134

Query: 344 FQCT--LCERAFSRSDHLSLHMKRH 366
           ++C    C++ FS    L  H K H
Sbjct: 135 YECPHEGCDKRFSLPSRLKRHEKVH 159

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 92.7 bits (231), Expect = 1e-22
 Identities = 23/80 (28%), Positives = 34/80 (42%)

Query: 286 CSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQ 345
           C    CGK + K + LK H  +HT + PY+C  +GC  +F+    L RH + H G    +
Sbjct: 107 CHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKK 166

Query: 346 CTLCERAFSRSDHLSLHMKR 365
              C            H+  
Sbjct: 167 DDSCSFVGKTWTLYLKHVAE 186

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 82.6 bits (205), Expect = 6e-19
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT--LCERAFSRSDHLS 360
                    K Y C +  CG  + ++ +L  H  KHTG++PF C    CE+ F+   HL+
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 361 LHMKRH 366
            H   H
Sbjct: 62  RHSLTH 67

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  106 bits (266), Expect = 7e-28
 Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 3/86 (3%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRH-FRKHTGDR 342
           H C+  GC K+Y++  +LK HLR+HTGEKPY C  +GC   F+ + +  +H  R H+ ++
Sbjct: 68  HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK 127

Query: 343 PFQCTL--CERAFSRSDHLSLHMKRH 366
           P+ C L  C + ++    L  H+K  
Sbjct: 128 PYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  101 bits (255), Expect = 2e-26
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 2/82 (2%)

Query: 286 CSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQ 345
              +   + +     L  H+R HTGEKP++C ++GC   ++R + L  H R HTG++P+ 
Sbjct: 40  GGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYM 99

Query: 346 CT--LCERAFSRSDHLSLHMKR 365
           C    C +AFS +   + H  R
Sbjct: 100 CEHEGCSKAFSNASDRAKHQNR 121

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 94.2 bits (235), Expect = 2e-23
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%)

Query: 286 CSHNGCGKTYTKSSHLKAHL---RTHTGEKPYQCGWKGCGWK---FARSDELTRHFRKHT 339
           C  +GC + +     L  H+     H   K + C W GC  +   F     L  H R+HT
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 340 GDRPFQCTL--CERAFSRSDHLSLHMKRH 366
           G++P +CT   C +++SR ++L  H++ H
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRSH 92

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 75.7 bits (187), Expect = 1e-16
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 285 TCSHNGCGKTYTKSSHLKAH-LRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
            C H GC K ++ +S    H  RTH+ EKPY C   GC  ++     L +H +   G
Sbjct: 99  MCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 59.1 bits (144), Expect = 6e-11
 Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 10/64 (15%)

Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRK---HTGDRPFQCTLCE-----RAFSRSDHLSLH 362
           E   +    GC  +F   ++L  H      H   + F C         R F     L +H
Sbjct: 1   ETDCRW--DGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH 58

Query: 363 MKRH 366
           M+RH
Sbjct: 59  MRRH 62

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  100 bits (251), Expect = 2e-26
 Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 2/76 (2%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCE 350
           CGK +++   LK H+R HTG KPY+C  K C +  A S  L +H R H+ +RPF+C +C 
Sbjct: 14  CGKCFSRKDKLKTHMRCHTGVKPYKC--KTCDYAAADSSSLNKHLRIHSDERPFKCQICP 71

Query: 351 RAFSRSDHLSLHMKRH 366
            A   S  L++H++ H
Sbjct: 72  YASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 79.0 bits (196), Expect = 1e-18
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC 346
           C      SS L  HLR H+ E+P++C  + C +    S +LT H R HTGD     
Sbjct: 42  CDYAAADSSSLNKHLRIHSDERPFKC--QICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 75.9 bits (188), Expect = 1e-17
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 2/60 (3%)

Query: 307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           +     P++C  + CG  F+R D+L  H R HTG +P++C  C+ A + S  L+ H++ H
Sbjct: 2   SSGSSGPHKC--EVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH 59

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 54.7 bits (133), Expect = 5e-10
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCG 317
           C      SS L  HLR+HTG+     G
Sbjct: 70  CPYASRNSSQLTVHLRSHTGDSGPSSG 96

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score =  100 bits (251), Expect = 2e-26
 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 4/77 (5%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG--DRPFQCTL 348
           CGK +    HL  H  +H+GEKPY C    CG +F R D ++ H R H G   +P+ C  
Sbjct: 13  CGKIFRDVYHLNRHKLSHSGEKPYSC--PVCGLRFKRKDRMSYHVRSHDGSVGKPYICQS 70

Query: 349 CERAFSRSDHLSLHMKR 365
           C + FSR DHL+ H+K+
Sbjct: 71  CGKGFSRPDHLNGHIKQ 87

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 76.4 bits (189), Expect = 9e-18
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 308 HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
            +G     C  + CG  F     L RH   H+G++P+ C +C   F R D +S H++ H
Sbjct: 2   SSGSSGVAC--EICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH 58

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 8/23 (34%), Positives = 14/23 (60%), Gaps = 1/23 (4%)

Query: 291 CGKTYTKSSHLKAHL-RTHTGEK 312
           CGK +++  HL  H+ + H+G  
Sbjct: 71  CGKGFSRPDHLNGHIKQVHSGPS 93

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 98.9 bits (247), Expect = 2e-26
 Identities = 23/45 (51%), Positives = 32/45 (71%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKP+ C W GCGW+F+RSDEL+RH R H+G +P   +
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 54.6 bits (132), Expect = 2e-10
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
             C+  GCG  +++S  L  H R+H+G KP   
Sbjct: 13  FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 99.1 bits (248), Expect = 4e-26
 Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCE 350
           C + +++S HL  H+RTHTGEKP+ C    CG KFARSDE  RH        P      E
Sbjct: 9   CMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRHRDIQHI-LPILEDKVE 65

Query: 351 RAFSRSDHLSLHMKRH 366
              S++ HL   + R 
Sbjct: 66  ELLSKNYHLENEVARL 81

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 68.7 bits (169), Expect = 5e-15
 Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 2/55 (3%)

Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           KP+QC  + C   F+RSD LT H R HTG++PF C +C R F+RSD    H    
Sbjct: 2   KPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ 54

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 57.9 bits (141), Expect = 4e-11
 Identities = 10/55 (18%), Positives = 18/55 (32%), Gaps = 6/55 (10%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRH---FRKHTGDR 342
           CG+ + +S   K H        P            +++  L       +K  G+R
Sbjct: 37  CGRKFARSDERKRHRDIQH-ILPILE--DKVEELLSKNYHLENEVARLKKLVGER 88

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  101 bits (253), Expect = 4e-26
 Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 2/78 (2%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL-- 348
            GK++     L  H+R HTGEKP+ C + GCG  FARS+ L  H R HTG++PF+C    
Sbjct: 68  EGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEG 127

Query: 349 CERAFSRSDHLSLHMKRH 366
           C+R F+ S     HM  H
Sbjct: 128 CDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 95.8 bits (239), Expect = 5e-24
 Identities = 27/64 (42%), Positives = 39/64 (60%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP 343
             C   GCGK + +S +LK H RTHTGEKP++C ++GC  +FA S +  +H   HT D+ 
Sbjct: 91  FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS 150

Query: 344 FQCT 347
              +
Sbjct: 151 GPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 92.7 bits (231), Expect = 6e-23
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 286 CSHNGCGKTYTKSSHLKAHLRTHTGEKPYQ----CGWKGC---GWKFARSDELTRHFRKH 338
                C +T++    L  H+       P Q    C W+ C   G  F    +L  H R H
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 339 TGDRPFQCTL--CERAFSRSDHLSLHMKRH 366
           TG++PF C    C + F+RS++L +H + H
Sbjct: 86  TGEKPFPCPFPGCGKIFARSENLKIHKRTH 115

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 81.6 bits (202), Expect = 8e-19
 Identities = 14/85 (16%), Positives = 22/85 (25%), Gaps = 11/85 (12%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQ----- 345
            G +        +       +       K C   F+   EL  H        P Q     
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 346 ----CTLCERAFSRSDHLSLHMKRH 366
               C    ++F     L  H++ H
Sbjct: 61  YWEECPREGKSFKAKYKLVNHIRVH 85

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 97.2 bits (243), Expect = 2e-25
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 285 TCSHNGCGKTYTKSSHLKAHLR-THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP 343
            C   GCG+ ++   +L  H +  H  +K + C    CG  F     L  H + H+  R 
Sbjct: 9   PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68

Query: 344 FQCTLCERAF 353
           + C     + 
Sbjct: 69  YICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 81.8 bits (203), Expect = 6e-20
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 308 HTGEKPYQCGWKGCGWKFARSDELTRHFR-KHTGDRPFQCT--LCERAFSRSDHLSLHMK 364
            +G     C + GCG  F+    L  H + +H   + F C    C ++F+   HL  HMK
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 365 RH 366
            H
Sbjct: 62  LH 63

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 63.3 bits (155), Expect = 4e-13
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGC 321
            +C    CGK++    HLK H++ H+  + Y C + G 
Sbjct: 39  FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGP 76

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 96.0 bits (240), Expect = 4e-25
 Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 2/76 (2%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCE 350
           CGK++ +SS L  HL  H+  +PY C  + CG +F +  ++ +H   HTG++P +C +C 
Sbjct: 7   CGKSFKRSSTLSTHLLIHSDTRPYPC--QYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCG 64

Query: 351 RAFSRSDHLSLHMKRH 366
           +AFS+S +L  H ++H
Sbjct: 65  KAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 69.8 bits (172), Expect = 2e-15
 Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 2/50 (4%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
           CGK + + S +K H   HTGEKP++C  + CG  F++S  L  H RKHTG
Sbjct: 35  CGKRFHQKSDMKKHTFIHTGEKPHKC--QVCGKAFSQSSNLITHSRKHTG 82

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 96.8 bits (242), Expect = 8e-25
 Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 7/85 (8%)

Query: 285 TCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRK---HTGD 341
            C    C K +    +LK H R HTGEKP++C    CG  + R + L  H  +   +  +
Sbjct: 9   ECPT--CHKKFLSKYYLKVHNRKHTGEKPFEC--PKCGKCYFRKENLLEHEARNCMNRSE 64

Query: 342 RPFQCTLCERAFSRSDHLSLHMKRH 366
           + F C++C+  F R   L LHM  H
Sbjct: 65  QVFTCSVCQETFRRRMELRLHMVSH 89

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 93.7 bits (234), Expect = 1e-23
 Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 7/85 (8%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLR---THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
             C    CGK Y +  +L  H      +  E+ + C    C   F R  EL  H   HTG
Sbjct: 36  FECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTC--SVCQETFRRRMELRLHMVSHTG 91

Query: 341 DRPFQCTLCERAFSRSDHLSLHMKR 365
           + P++C+ C + F +   L  HM +
Sbjct: 92  EMPYKCSSCSQQFMQKKDLQSHMIK 116

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 73.7 bits (182), Expect = 2e-16
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)

Query: 308 HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
            +G    +C    C  KF     L  H RKHTG++PF+C  C + + R ++L  H  R+
Sbjct: 2   SSGSSGVEC--PTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARN 58

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 39.0 bits (92), Expect = 4e-04
 Identities = 7/30 (23%), Positives = 16/30 (53%), Gaps = 3/30 (10%)

Query: 284 HTCSHNGCGKTYTKSSHLKAH-LRTHTGEK 312
           + CS   C + + +   L++H ++ H+G  
Sbjct: 95  YKCSS--CSQQFMQKKDLQSHMIKLHSGPS 122

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 96.0 bits (240), Expect = 1e-24
 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCE 350
           CG+ +TKS +L  H RTHT E+PY C    C   F R D L  H   H+ ++PF+C  C 
Sbjct: 23  CGRHFTKSYNLLIHERTHTDERPYTC--DICHKAFRRQDHLRDHRYIHSKEKPFKCQECG 80

Query: 351 RAFSRSDHLSLHMKRH 366
           + F +S  L++H   H
Sbjct: 81  KGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 86.3 bits (215), Expect = 3e-21
 Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 298 SSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSD 357
           SS           +K + C  K CG  F +S  L  H R HT +RP+ C +C +AF R D
Sbjct: 2   SSGSSGGRLPSKTKKEFIC--KFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQD 59

Query: 358 HLSLHMKRH 366
           HL  H   H
Sbjct: 60  HLRDHRYIH 68

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 77.1 bits (191), Expect = 8e-18
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           C K + +  HL+ H   H+ EKP++C  + CG  F +S  L  H   H         
Sbjct: 51  CHKAFRRQDHLRDHRYIHSKEKPFKC--QECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 97.1 bits (243), Expect = 4e-24
 Identities = 39/83 (46%), Positives = 57/83 (68%), Gaps = 4/83 (4%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP 343
           + C    CGK++++ +HL+AH RTHTGEKPY+C    CG  F+R D L  H R HTG++P
Sbjct: 106 YACPE--CGKSFSQLAHLRAHQRTHTGEKPYKC--PECGKSFSREDNLHTHQRTHTGEKP 161

Query: 344 FQCTLCERAFSRSDHLSLHMKRH 366
           ++C  C ++FSR D L++H + H
Sbjct: 162 YKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 97.1 bits (243), Expect = 4e-24
 Identities = 36/76 (47%), Positives = 52/76 (68%), Gaps = 2/76 (2%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCE 350
           CGK++++S HL  H RTHTGEKPY+C    CG  F+   +LTRH R HTG++P++C  C 
Sbjct: 27  CGKSFSRSDHLAEHQRTHTGEKPYKC--PECGKSFSDKKDLTRHQRTHTGEKPYKCPECG 84

Query: 351 RAFSRSDHLSLHMKRH 366
           ++FS+  +L  H + H
Sbjct: 85  KSFSQRANLRAHQRTH 100

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 96.7 bits (242), Expect = 4e-24
 Identities = 35/76 (46%), Positives = 52/76 (68%), Gaps = 2/76 (2%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCE 350
           CGK++++ ++L+AH RTHTGEKPY C    CG  F++   L  H R HTG++P++C  C 
Sbjct: 83  CGKSFSQRANLRAHQRTHTGEKPYAC--PECGKSFSQLAHLRAHQRTHTGEKPYKCPECG 140

Query: 351 RAFSRSDHLSLHMKRH 366
           ++FSR D+L  H + H
Sbjct: 141 KSFSREDNLHTHQRTH 156

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 87.5 bits (218), Expect = 1e-20
 Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 2/73 (2%)

Query: 294 TYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAF 353
           +   SS   A      GEKPY C    CG  F+RSD L  H R HTG++P++C  C ++F
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYAC--PECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSF 59

Query: 354 SRSDHLSLHMKRH 366
           S    L+ H + H
Sbjct: 60  SDKKDLTRHQRTH 72

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 73.2 bits (181), Expect = 2e-15
 Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 2/53 (3%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP 343
           CGK++++  +L  H RTHTGEKPY+C    CG  F+R D L  H R HTG + 
Sbjct: 139 CGKSFSREDNLHTHQRTHTGEKPYKC--PECGKSFSRRDALNVHQRTHTGKKT 189

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 89.9 bits (224), Expect = 8e-23
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 4/69 (5%)

Query: 300 HLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG--DRPFQCTLCERAFSRSD 357
              +  RTH+GEKPY+C    C  +F +S  +  H  +        F C  C+   +R  
Sbjct: 2   SSGSSGRTHSGEKPYEC--YICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKS 59

Query: 358 HLSLHMKRH 366
            L +H+++ 
Sbjct: 60  DLGVHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 70.2 bits (173), Expect = 1e-15
 Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 7/64 (10%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGE--KPYQCGWKGCGWKFARSDELTRHFRK-HTG 340
           + C    C   +T+S  +K H+     E    + C    C    AR  +L  H RK H+ 
Sbjct: 16  YECYI--CHARFTQSGTMKMHILQKHTENVAKFHC--PHCDTVIARKSDLGVHLRKQHSY 71

Query: 341 DRPF 344
             P 
Sbjct: 72  SGPS 75

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 90.2 bits (225), Expect = 1e-22
 Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCE 350
           CGK++T  S    H+  H G +PY C    CG KF     L  H + HTG +P++C +C 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGC--GVCGKKFKMKHHLVGHMKIHTGIKPYECNICA 72

Query: 351 RAFSRSDHLSLHM 363
           + F   D    H+
Sbjct: 73  KRFMWRDSFHRHV 85

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 85.2 bits (212), Expect = 1e-20
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 12/84 (14%)

Query: 283 MHT------CSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFR 336
           MH       C    CGK +    HL  H++ HTG KPY+C    C  +F   D    H  
Sbjct: 31  MHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYEC--NICAKRFMWRDSF--HRH 84

Query: 337 KHTGDRPFQCTLCERAFSRSDHLS 360
             +  + ++    E+  + +   S
Sbjct: 85  VTSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 77.9 bits (193), Expect = 5e-18
 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 306 RTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKR 365
              +G+K Y C    CG  F    +  RH   H G RP+ C +C + F    HL  HMK 
Sbjct: 3   SGSSGDKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 59

Query: 366 H 366
           H
Sbjct: 60  H 60

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 85.3 bits (212), Expect = 3e-21
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 4/63 (6%)

Query: 306 RTHTGEKPYQCGWKGCGWKFARSDELTRHFR--KHTGDRPFQCTLCERAFSRSDHLSLHM 363
            T  GE  Y+C  K C   +       RH+        + + C  C + F+R D+++ H+
Sbjct: 3   FTKEGEHTYRC--KVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

Query: 364 KRH 366
           K  
Sbjct: 61  KII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 66.4 bits (163), Expect = 2e-14
 Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 6/59 (10%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRT--HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
           + C    C + YT  S+   H  T      K Y C +  C  +F R D +T H +    
Sbjct: 11  YRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK 65

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 84.0 bits (209), Expect = 1e-20
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 298 SSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSD 357
             H   H      +KPY+C    C   F     L  H   HTG++P++C +C   F+R  
Sbjct: 2   GHHHHHHSHMTHSDKPYKC--DRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPA 59

Query: 358 HLSLHMKRH 366
           +L  H + H
Sbjct: 60  NLKTHTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 70.6 bits (174), Expect = 8e-16
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF 344
           C  ++    +L +H   HTGEKPY+C    CG +F R   L  H R H+G++P+
Sbjct: 23  CQASFRYKGNLASHKTVHTGEKPYRC--NICGAQFNRPANLKTHTRIHSGEKPY 74

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 81.3 bits (202), Expect = 1e-19
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 2/70 (2%)

Query: 297 KSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRS 356
            S             + Y+C    CG  F+ S +L++H R HTG++P++C  C +AF + 
Sbjct: 2   SSGSSGRSEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQR 59

Query: 357 DHLSLHMKRH 366
            HL  H + H
Sbjct: 60  SHLIGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 70.5 bits (174), Expect = 8e-16
 Identities = 27/54 (50%), Positives = 32/54 (59%), Gaps = 2/54 (3%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF 344
           CGK+++ SS L  H RTHTGEKPY+C    CG  F +   L  H R HTG  P 
Sbjct: 24  CGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 46.7 bits (112), Expect = 3e-07
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 326 ARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
             S    R   +    R ++C  C ++FS S  LS H + H
Sbjct: 1   GSSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 41

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 81.4 bits (202), Expect = 1e-19
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 6/71 (8%)

Query: 300 HLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG----DRPFQCTLCERAFSR 355
              +  RTHTGEKPY C    C   F +   L  HF+++         F C+ C + F+R
Sbjct: 2   SSGSSGRTHTGEKPYAC--SHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTR 59

Query: 356 SDHLSLHMKRH 366
            + ++ H    
Sbjct: 60  RNTMARHADNC 70

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 79.9 bits (198), Expect = 5e-19
 Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 8/74 (10%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGE----KPYQCGWKGCGWKFARSDELTRHFRKHT 339
           + CSH  C KT+ +   L  H + +         + C    CG  F R + + RH     
Sbjct: 16  YACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVC--SKCGKTFTRRNTMARHADNCA 71

Query: 340 GDRPFQCTLCERAF 353
           G    +      + 
Sbjct: 72  GPDGVEGENSGPSS 85

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 80.6 bits (200), Expect = 2e-19
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 306 RTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKR 365
            + +   P +C    C +  +    L  H R H  DRPF+C  C     +  +LS HMK+
Sbjct: 2   SSGSSGHPEKCS--ECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK 59

Query: 366 H 366
            
Sbjct: 60  F 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 74.1 bits (183), Expect = 4e-17
 Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           C  + +  + L+ H R H  ++P++C    C +   +   L++H +K  GD     +
Sbjct: 15  CSYSCSSKAALRIHERIHCTDRPFKC--NYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 77.5 bits (192), Expect = 2e-18
 Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 301 LKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLS 360
                  H+GEKPY C    CG  F+RS  L +H R HTG++P++C  C +AFS++  L 
Sbjct: 2   SSGSSGIHSGEKPYGC--VECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLI 59

Query: 361 LHMKRH 366
            H + H
Sbjct: 60  NHQRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 71.0 bits (175), Expect = 5e-16
 Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 2/54 (3%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF 344
           CGK +++SS L  H R HTGEKPY+C    CG  F+++  L  H R HT     
Sbjct: 20  CGKAFSRSSILVQHQRVHTGEKPYKC--LECGKAFSQNSGLINHQRIHTSGPSS 71

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 75.1 bits (185), Expect = 2e-17
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 5/62 (8%)

Query: 308 HTGEKPYQCGWKGCGWKFARSDELTRHFRKHT---GDRPFQCTLCERAFSRSDHLSLHMK 364
            +G    QC  + CG+   +   L  H RKH        F C  C + F + D ++ H  
Sbjct: 2   SSGSSGLQC--EICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRS 59

Query: 365 RH 366
           + 
Sbjct: 60  KS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 62.8 bits (153), Expect = 6e-13
 Identities = 15/66 (22%), Positives = 22/66 (33%), Gaps = 7/66 (10%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHT---GEKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
             C    CG T  + + L  H R H        + C  + CG +F + D +  H  K   
Sbjct: 8   LQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPC--EFCGKRFEKPDSVAAHRSKSHP 63

Query: 341 DRPFQC 346
                 
Sbjct: 64  ALLLAP 69

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 74.1 bits (183), Expect = 3e-17
 Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 5/59 (8%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRK-HTGD 341
             C    C + + +  HLK H R+HT EKPY C    C   F R D L RH +K H+G+
Sbjct: 3   FVCEV--CTRAFARQEHLKRHYRSHTNEKPYPC--GLCNRAFTRRDLLIRHAQKIHSGN 57

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 70.2 bits (173), Expect = 7e-16
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)

Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKR 365
           + + C  + C   FAR + L RH+R HT ++P+ C LC RAF+R D L  H ++
Sbjct: 1   RSFVC--EVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQK 52

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 342 RPFQCTLCERAFSRSDHLSLHMKRH 366
           R F C +C RAF+R +HL  H + H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 69.3 bits (170), Expect = 1e-15
 Identities = 21/33 (63%), Positives = 25/33 (75%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
             R  TG +PFQC  C+R+FSRSDHL+LH KRH
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 68.8 bits (169), Expect = 1e-15
 Identities = 17/31 (54%), Positives = 22/31 (70%)

Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDR 342
           +P+ C W  CG +F RSDEL RH R HTG++
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 44.9 bits (107), Expect = 4e-07
 Identities = 15/29 (51%), Positives = 20/29 (68%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEK 312
             C+ + CGK +T+S  L+ H RTHTGEK
Sbjct: 3   FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 38.7 bits (91), Expect = 6e-05
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 342 RPFQCT--LCERAFSRSDHLSLHMKRH 366
           RPF CT   C + F+RSD L  H + H
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTH 27

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 65.4 bits (159), Expect = 9e-14
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHL-RTHTGEKP---YQCGWKGC---GWKFARSDELTRHFR 336
            +     C +T++    L  H+   H G      + C W+ C   G  F    +L  H R
Sbjct: 24  LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83

Query: 337 KHTGDRPFQCT 347
            HTG++    +
Sbjct: 84  VHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 46.5 bits (110), Expect = 4e-07
 Identities = 13/69 (18%), Positives = 19/69 (27%), Gaps = 11/69 (15%)

Query: 307 THTGEKPYQCGWKGCGWKFARSDELTRHFRK-HTGDRPFQ--------CTLCERAFSRSD 357
               +       K C   F+   EL  H    H G             C    ++F    
Sbjct: 19  IDEAQLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKY 76

Query: 358 HLSLHMKRH 366
            L  H++ H
Sbjct: 77  KLVNHIRVH 85

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 64.1 bits (157), Expect = 1e-13
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRK-HTGDRPFQCTLCERAFS 354
           +   + +  KPY C  + CG  F+R D L  H ++ HT +RP +C +     S
Sbjct: 2   SSGSSGSVGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 49.9 bits (120), Expect = 1e-08
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 5/44 (11%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHL-RTHTGEKPYQCGWKGCGWKFA 326
           + C    CGK +++  HL  H+ + HT E+P++C  +      +
Sbjct: 13  YICQS--CGKGFSRPDHLNGHIKQVHTSERPHKC--QVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKR 365
                +  +P+ C  C + FSR DHL+ H+K+
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQ 34

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 62.0 bits (151), Expect = 4e-13
 Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 2/36 (5%)

Query: 277 SRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEK 312
            ++K   H C   GCGK Y K+SHL+AHLR HTGE+
Sbjct: 4   GKKKQ--HICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.0 bits (149), Expect = 1e-12
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEK Y C  K CG  F+R+  L +H R H+G++P   +
Sbjct: 2   SSGSSGTGEKLYNC--KECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CGK+++++  L  H R H+GEKP   
Sbjct: 18  CGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG++ + C  C ++FSR+  L  H + H
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 3e-12
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + +GE+PY C    CG  F R   L  H ++H  ++    +
Sbjct: 3   SGSSGSGERPYGC--NECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK + + SHL  HL+ H  EK    
Sbjct: 16  NECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 7e-07
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                +G+RP+ C  C + F R  HL  H+KRH
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 3e-12
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGEKPY+C  + CG  F  S  L +H   H+G+RP   +
Sbjct: 3   SGSSGTGEKPYKC--QVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CGK +  SSHL  H   H+GE+P   
Sbjct: 18  CGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P++C +C +AF  S HL  H   H
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 3e-12
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + +GEKPY+C    CG  F R   L  H R HTG RP   +
Sbjct: 3   SGSSGSGEKPYKC--SECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CGK + + +HL  H R HTG +P   
Sbjct: 18  CGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 +G++P++C+ C +AF R  HL+ H + H
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 4e-12
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC 346
           +   + TGEKP+QC  K CG  F+ S  L +H R H    P   
Sbjct: 2   SSGSSGTGEKPFQC--KECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.9 bits (120), Expect = 9e-09
 Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 8/42 (19%)

Query: 284 HTCSHNG--------CGKTYTKSSHLKAHLRTHTGEKPYQCG 317
              S  G        CG  ++ S  L  HLR+H    P    
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 8e-06
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG++PFQC  C   FS S  L  H++ H
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 59.5 bits (145), Expect = 4e-12
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TG++PY+C    CG  F     L  H R HTG++P   +
Sbjct: 3   SGSSGTGQRPYEC--IECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.2 bits (121), Expect = 7e-09
 Identities = 13/28 (46%), Positives = 15/28 (53%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
             CGK +   S L  H R+HTGEKP   
Sbjct: 16  IECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG RP++C  C +AF     L  H + H
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 5e-12
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKPY+C    CG  F  +   T+H R HTG RP   +
Sbjct: 2   SSGSSGTGEKPYKC--MECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.6 bits (114), Expect = 5e-08
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
             CGK +  +S    H R HTG++P   
Sbjct: 16  MECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 9/33 (27%), Positives = 17/33 (51%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG++P++C  C +AF  +   + H + H
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 6e-12
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGE PY+C    CG  F+R  +L  H R H G++P   +
Sbjct: 3   SGSSGTGENPYEC--HECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           + CGK +++   L +H RTH GEKP   
Sbjct: 16  HECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG+ P++C  C +AFSR   L  H + H
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.0 bits (144), Expect = 6e-12
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGE+ Y+C    CG  FAR   L  H R HTG++P   +
Sbjct: 3   SGSSGTGERHYEC--SECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 2e-08
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           + CGK + + S L  H R HTGEKP   
Sbjct: 16  SECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG+R ++C+ C +AF+R   L +H + H
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 58.7 bits (143), Expect = 6e-12
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKPY C  K CG  F  +  L +H R H+G++P   +
Sbjct: 2   SSGSSGTGEKPYNC--KECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CGK++  +S L  H R H+GEKP   
Sbjct: 18  CGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P+ C  C ++F  +  L  H + H
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH 35

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 59.1 bits (144), Expect = 6e-12
 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGEKPY+C  K CG  F+++  L +H R HTG++P   +
Sbjct: 3   SGSSGTGEKPYEC--KECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 49.8 bits (120), Expect = 9e-09
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
             CGK +++++HL  H R HTGEKP   
Sbjct: 16  KECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P++C  C +AFS++ HL  H + H
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.6 bits (143), Expect = 6e-12
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKP++C    C   F     L  H R HTG++P   +
Sbjct: 2   SSGSSGTGEKPFEC--SECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 8e-09
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           + C K +   S+L  H RTHTGEKP   
Sbjct: 16  SECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 6e-06
 Identities = 11/34 (32%), Positives = 21/34 (61%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++PF+C+ C++AF+   +L +H + H
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 7e-12
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   +  GEKPY C    CG  F+    L  H R H+G++P   +
Sbjct: 2   SSGSSGAGEKPYGC--SECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           + CGK ++  S+L  H+RTH+GEKP   
Sbjct: 16  SECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                  G++P+ C+ C +AFS   +L +HM+ H
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 8e-12
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + +GEKPY+C    CG  + R  +L  H R HTG++    +
Sbjct: 2   SSGSSGSGEKPYKC--VECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 7e-09
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CGK Y +   L  H R HTGEK    
Sbjct: 18  CGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 8/33 (24%), Positives = 16/33 (48%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                +G++P++C  C + + R   L  H + H
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 58.7 bits (143), Expect = 8e-12
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TG+KP++C    CG  F     L  H R HTG++    +
Sbjct: 2   SSGSSGTGQKPFEC--THCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 286 CSHNGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           C+H  CGK++    +L  H R HTGEK    
Sbjct: 15  CTH--CGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG +PF+CT C ++F    +L  H + H
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 58.7 bits (143), Expect = 8e-12
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGEKP++C    CG  F+ S +L  H R HTG++P   +
Sbjct: 3   SGSSGTGEKPFEC--AECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 50.2 bits (121), Expect = 6e-09
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CGK+++ SS L  H R HTGEKP   
Sbjct: 18  CGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++PF+C  C ++FS S  L+ H + H
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 8e-12
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + +GEKPY C    CG  F  S EL RH R HTG++P   +
Sbjct: 3   SGSSGSGEKPYVC--DYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           + CGK +  S+ L  H R HTGEKP   
Sbjct: 16  DYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 7e-06
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 +G++P+ C  C +AF  S  L  H + H
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 8e-12
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKPY C    CG  F     L +H + HT  +P   +
Sbjct: 2   SSGSSGTGEKPYIC--AECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CGK +T  S+L  H + HT +KP   
Sbjct: 18  CGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG++P+ C  C +AF+   +L  H K H
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 8e-12
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKP+ C    CG  F+    L +H R HTG++P   +
Sbjct: 2   SSGSSGTGEKPFDC--IDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
             CGK ++    L  H R HTGEKP   
Sbjct: 16  IDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG++PF C  C +AFS    L+ H + H
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 58.3 bits (142), Expect = 8e-12
 Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC 346
           +   + TG KPY C    CG  F     L  H R HTG+     
Sbjct: 2   SSGSSGTGMKPYVC--NECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 14/29 (48%), Positives = 16/29 (55%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQCG 317
           N CGK +   S+L  H RTHTGE     G
Sbjct: 16  NECGKAFRSKSYLIIHTRTHTGESGPSSG 44

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG +P+ C  C +AF    +L +H + H
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 9e-12
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKPY+C  K C   F +   L +H + HTG++P   +
Sbjct: 2   SSGSSGTGEKPYEC--KVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
             C K +T+ +HL  H +THTGEKP   
Sbjct: 16  KVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P++C +C +AF++  HL+ H K H
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 9e-12
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGEKPY+C    CG  F R   L  H + HTG+R    +
Sbjct: 3   SGSSGTGEKPYKC--SDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 3e-09
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           + CGK +T+ S L  H ++HTGE+    
Sbjct: 16  SDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 9e-06
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P++C+ C +AF+R   L +H + H
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 9e-12
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKPY C    CG  F +   L RH R HTG++P   +
Sbjct: 2   SSGSSGTGEKPYIC--NECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 15/28 (53%), Positives = 18/28 (64%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK++ + SHL  H R HTGEKP   
Sbjct: 16  NECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG++P+ C  C ++F +  HL+ H + H
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGEKPY+C    CG  F+    L+ H R H+G +P   +
Sbjct: 3   SGSSGTGEKPYEC--SVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           + CGK ++    L  H R H+G+KP   
Sbjct: 16  SVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 12/34 (35%), Positives = 21/34 (61%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P++C++C +AFS    LS+H + H
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC 346
           +   + TGEKPY+C    C   F     L  H R HTG+     
Sbjct: 2   SSGSSGTGEKPYEC--NECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 53.6 bits (130), Expect = 3e-10
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQCG 317
           N C K +   S+L  H RTHTGE     G
Sbjct: 16  NECQKAFNTKSNLMVHQRTHTGESGPSSG 44

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 10/33 (30%), Positives = 20/33 (60%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG++P++C  C++AF+   +L +H + H
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + +GEKP++C  + CG  F  + +   H R H+G++P   +
Sbjct: 2   SSGSSGSGEKPFKC--EECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.9 bits (120), Expect = 9e-09
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CGK +  +S   +H R+H+GEKP   
Sbjct: 18  CGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 8/33 (24%), Positives = 15/33 (45%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                +G++PF+C  C + F  +     H + H
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKP++C    CG  F     L RH   HT ++P   +
Sbjct: 2   SSGSSGTGEKPFKC--DICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 8e-09
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           + CGK++   S L  H   HT EKP   
Sbjct: 16  DICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.9 bits (97), Expect = 1e-05
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG++PF+C +C ++F     L+ H   H
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGEKPY+C    C   F+    LT+H R H+G++P   +
Sbjct: 3   SGSSGTGEKPYEC--DVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           + C K ++  + L  H R H+GEKP   
Sbjct: 16  DVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG++P++C +C +AFS    L+ H + H
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH 35

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 58.3 bits (142), Expect = 1e-11
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKPY+C  + CG  F    +L  H   HTG++P   +
Sbjct: 2   SSGSSGTGEKPYKC--EECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 11/26 (42%), Positives = 12/26 (46%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CGK +     L  H   HTGEKP   
Sbjct: 18  CGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG++P++C  C + F     L  H   H
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + +GEKP++C  K CG  F ++  L  H R HTG++P   +
Sbjct: 2   SSGSSGSGEKPFKC--KECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 14/26 (53%), Positives = 18/26 (69%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CGK + ++ HL +HLR HTGEKP   
Sbjct: 18  CGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 11/34 (32%), Positives = 21/34 (61%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 +G++PF+C  C +AF ++ HL+ H++ H
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKP++C    CG  F+R   L  H + HTG++P   +
Sbjct: 2   SSGSSGTGEKPFKC--VECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 49.8 bits (120), Expect = 9e-09
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CGK +++ S L  H + HTGEKP   
Sbjct: 18  CGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 41.4 bits (98), Expect = 9e-06
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++PF+C  C + FSR   L++H K H
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGEKP++C    CG  + +   LT+H R HTG++P   +
Sbjct: 3   SGSSGTGEKPFKC--GECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 8e-09
 Identities = 14/28 (50%), Positives = 16/28 (57%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
             CGK+Y +  HL  H R HTGEKP   
Sbjct: 16  GECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++PF+C  C +++++  HL+ H + H
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TG KPYQC    CG  F+++ +L RH R HTG++P   +
Sbjct: 2   SSGSSGTGGKPYQC--NECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 14/28 (50%), Positives = 18/28 (64%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK ++++S L  H R HTGEKP   
Sbjct: 16  NECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG +P+QC  C +AFS++  L+ H + H
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TG K ++C    CG  F R   L+ H + HTG++P   +
Sbjct: 2   SSGSSGTGGKHFEC--TECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
             CGK +T+ S L  H + HTGEKP   
Sbjct: 16  TECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG + F+CT C +AF+R   LS+H K H
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGE+P++C    CG  F +S  L +H R HTG++P   +
Sbjct: 3   SGSSGTGERPHKC--NECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 8e-09
 Identities = 15/28 (53%), Positives = 19/28 (67%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK++ +S+HL  H R HTGEKP   
Sbjct: 16  NECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG+RP +C  C ++F +S HL  H + H
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGEK Y+C    CG  F+R+ +L++H + HTG++P   +
Sbjct: 3   SGSSGTGEKRYKC--NECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK ++++S L  H + HTGEKP   
Sbjct: 16  NECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++ ++C  C + FSR+  LS H K H
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TG KPY C    C   F+   +L  H R HTG +P   +
Sbjct: 2   SSGSSGTGVKPYGC--SQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           + C KT++  S L  H R+HTG KP   
Sbjct: 16  SQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 41.7 bits (99), Expect = 7e-06
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG +P+ C+ C + FS    L +H + H
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKPY+C    CG  F R+  L RH   HTG++P   +
Sbjct: 2   SSGSSGTGEKPYKC--HECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 7e-09
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           + CGK + ++SHL  H   HTGEKP   
Sbjct: 16  HECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P++C  C + F R+ HL+ H   H
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGEKPY C    CG  F  S  L +H R HT +     +
Sbjct: 3   SGSSGTGEKPYSC--NVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 8e-09
 Identities = 13/28 (46%), Positives = 15/28 (53%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK +  S+HL  HLR HT E     
Sbjct: 16  NVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P+ C +C +AF  S HL+ H++ H
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKPY+C  + CG  +     L  H + HTG+RP   +
Sbjct: 2   SSGSSGTGEKPYKC--EKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 7e-09
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
             CGK Y    +L  H + HTGE+P   
Sbjct: 16  EKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG++P++C  C + ++   +L +H K H
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRK-HTGDRPFQCT 347
           +   + TG+KPY+C    CG  F ++  L RH+R  HTG++P   +
Sbjct: 2   SSGSSGTGKKPYEC--IECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 45.3 bits (108), Expect = 4e-07
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 289 NGCGKTYTKSSHLKAHLR-THTGEKPYQC 316
             CGK + +++ L  H R  HTGEKP   
Sbjct: 16  IECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 39.1 bits (92), Expect = 7e-05
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKR 365
                TG +P++C  C +AF ++  L  H + 
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRY 34

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGEKP++C  + CG  F+ + +L  H R HTG+ P   +
Sbjct: 3   SGSSGTGEKPHEC--RECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
             CGK+++ +S L  H R HTGE P   
Sbjct: 16  RECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 8e-06
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P +C  C ++FS +  L +H + H
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + +GEKP+QC  + CG +F ++  L  H R HTG++P   +
Sbjct: 3   SGSSGSGEKPFQC--EECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 15/28 (53%), Positives = 19/28 (67%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
             CGK +T++SHL +H R HTGEKP   
Sbjct: 16  EECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 +G++PFQC  C + F+++ HL  H + H
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGEKPY+C    CG  F +  +L  H + HTG++P   +
Sbjct: 3   SGSSGTGEKPYEC--SICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 286 CSHNGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CS   CGK++TK S L  H + HTGEKP   
Sbjct: 15  CSI--CGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 9/34 (26%), Positives = 21/34 (61%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P++C++C ++F++   L +H + H
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGE P+ C    CG  F     L  H + HTG+RP   +
Sbjct: 2   SSGSSGTGENPFIC--SECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 2e-08
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           + CGK +T  ++L  H + HTGE+P   
Sbjct: 16  SECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG+ PF C+ C + F+   +L +H K H
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGEKPY+C    CG  F+    LT H   HTG +P   +
Sbjct: 3   SGSSGTGEKPYEC--NQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 8e-09
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK ++  S L  H   HTG+KP   
Sbjct: 16  NQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P++C  C +AFS    L+ H   H
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + +GEKPY C    CG  F++   L+ H R HTG++P   +
Sbjct: 2   SSGSSGSGEKPYGC--NECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 1e-09
 Identities = 17/28 (60%), Positives = 20/28 (71%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGKT+++ S L AH RTHTGEKP   
Sbjct: 16  NECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                +G++P+ C  C + FS+   LS H + H
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGE+ Y+C    CG  F +   L+ H R H G++P   +
Sbjct: 3   SGSSGTGERHYEC--SECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           + CGK + + S L  H R H GEKP   
Sbjct: 16  SECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG+R ++C+ C +AF +   LS+H + H
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC 346
           +   + TGEKPY+C    CG  F +  +L  H R HTG+ P   
Sbjct: 2   SSGSSGTGEKPYEC--SDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           + CGK++ K S L  H R HTGE P   
Sbjct: 16  SDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 9/33 (27%), Positives = 19/33 (57%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG++P++C+ C ++F +   L +H + H
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + + EKPY+C  + CG  + R   L  H R H G++    +
Sbjct: 2   SSGSSGSVEKPYKC--EDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CGK Y +  +L  H R H GEK    
Sbjct: 18  CGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 7/33 (21%), Positives = 18/33 (54%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                + ++P++C  C + ++R  +L +H + H
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGEKPY+C    CG  F     L  H   H+G++P   +
Sbjct: 3   SGSSGTGEKPYKC--NECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 13/28 (46%), Positives = 15/28 (53%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK +   S L  H  TH+GEKP   
Sbjct: 16  NECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P++C  C +AF     L++H   H
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKPY+C    CG  FA+   LT+H R HTG++P   +
Sbjct: 2   SSGSSGTGEKPYRC--GECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
             CGK + + ++L  H R HTGEKP   
Sbjct: 16  GECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 7e-06
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P++C  C +AF++  +L+ H + H
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 2e-11
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKPY C  + CG  F    +L  H R HTG++P   +
Sbjct: 2   SSGSSGTGEKPYNC--EECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 13/26 (50%), Positives = 15/26 (57%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CGK +   S L+ H R HTGEKP   
Sbjct: 18  CGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P+ C  C +AF     L  H + H
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 2e-11
 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGEKPY+C    CG  F+++ +L RH R HTG++P   +
Sbjct: 3   SGSSGTGEKPYKC--NECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 14/28 (50%), Positives = 18/28 (64%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK ++++S L  H R HTGEKP   
Sbjct: 16  NECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P++C  C +AFS++  L+ H + H
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 2e-11
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKPY+C    CG  F ++  L RH   HTG++P   +
Sbjct: 2   SSGSSGTGEKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 15/28 (53%), Positives = 18/28 (64%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK +T++SHL  H   HTGEKP   
Sbjct: 16  NECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 10/33 (30%), Positives = 19/33 (57%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG++P++C  C + F+++ HL+ H   H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 2e-11
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TG+KPY+C    CG  F ++  L RH   HTG++P   +
Sbjct: 2   SSGSSGTGKKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 15/28 (53%), Positives = 18/28 (64%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK +T++SHL  H   HTGEKP   
Sbjct: 16  NECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG +P++C  C + F+++ HL+ H   H
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 2e-11
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKPY+C    CG  F ++  L RH   HTG++P   +
Sbjct: 2   SSGSSGTGEKPYKC--NECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 15/28 (53%), Positives = 18/28 (64%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK +T++SHL  H   HTGEKP   
Sbjct: 16  NECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P++C  C + F+++ HL  H   H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 3e-11
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              +  GEK Y+C    CG +F++S  L  H R HTG++P   +
Sbjct: 3   SGSSGMGEKCYKC--DVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 15/28 (53%), Positives = 20/28 (71%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           + CGK +++SSHL+ H R HTGEKP   
Sbjct: 16  DVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 G++ ++C +C + FS+S HL  H + H
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 3e-11
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + +GEKPY+C    CG  F ++  LT H+R HTG++P   +
Sbjct: 2   SSGSSGSGEKPYKC--NECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.3 bits (124), Expect = 3e-09
 Identities = 16/28 (57%), Positives = 19/28 (67%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK +T++SHL  H R HTGEKP   
Sbjct: 16  NECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 9/34 (26%), Positives = 20/34 (58%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 +G++P++C  C + F+++ HL+ H + H
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 3e-11
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKPY+C    CG  F     LT H   HTG++P   +
Sbjct: 2   SSGSSGTGEKPYKC--NECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 2e-08
 Identities = 13/28 (46%), Positives = 15/28 (53%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK +   S+L  H   HTGEKP   
Sbjct: 16  NECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG++P++C  C +AF    +L+ H   H
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKPY+C    CG  F     L  H + HTG+R    +
Sbjct: 2   SSGSSGTGEKPYKC--SDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 8e-09
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CGK++T  S L+ H + HTGE+    
Sbjct: 18  CGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 10/33 (30%), Positives = 19/33 (57%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG++P++C+ C ++F+    L +H K H
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 306 RTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC 346
              +GE PY+C    CG  F R D+L  H R H G+     
Sbjct: 3   SGSSGENPYEC--SECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 51.7 bits (125), Expect = 2e-09
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQCG 317
           + CGK + +   L +H RTH GE     G
Sbjct: 14  SECGKAFNRKDQLISHQRTHAGESGPSSG 42

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 11/31 (35%), Positives = 19/31 (61%)

Query: 336 RKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
              +G+ P++C+ C +AF+R D L  H + H
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTH 33

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKPY+C    C   F     LT H R HTG++P   +
Sbjct: 2   SSGSSGTGEKPYKC--DVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 1e-08
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           + C K++   S L  H R HTGEKP   
Sbjct: 16  DVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 9/33 (27%), Positives = 19/33 (57%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG++P++C +C ++F     L++H + H
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKPY+C    CG  F ++  L RH R HTG +P   +
Sbjct: 2   SSGSSGTGEKPYKC--NECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 15/28 (53%), Positives = 18/28 (64%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK +T++SHL  H R HTG KP   
Sbjct: 16  NECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 10/33 (30%), Positives = 20/33 (60%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG++P++C  C + F+++ HL+ H + H
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 57.0 bits (137), Expect = 4e-11
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDR 342
           CG    K S LK H+RTHT  +PY C    C + F     LT+H +     +
Sbjct: 7   CGIRXKKPSMLKKHIRTHTDVRPYHC--TYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 49.3 bits (117), Expect = 2e-08
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 314 YQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           Y C    CG +  +   L +H R HT  RP+ CT C  +F    +L+ HMK  
Sbjct: 2   YICE--ECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   +  GEKPYQC    CG  F+ S  LT+H+  HT ++P   +
Sbjct: 2   SSGSSGEGEKPYQC--SECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CGK+++ S  L  H  THT EKP   
Sbjct: 18  CGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 G++P+QC+ C ++FS S  L+ H   H
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC 346
           +   + +G+KPY+C  K C   F +   L +H R HTG+R    
Sbjct: 2   SSGSSGSGKKPYEC--KECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           C KT+ +  HL  H R HTGE+    
Sbjct: 18  CRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 9/34 (26%), Positives = 17/34 (50%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 +G +P++C  C + F +  HL+ H + H
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + TGEKPY+C    CG  F  +  L+RH R HTG++P   +
Sbjct: 3   SGSSGTGEKPYKC--NECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 14/28 (50%), Positives = 17/28 (60%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK +  +S+L  H R HTGEKP   
Sbjct: 16  NECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P++C  C + F  + +LS H + H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC 346
           +   + TG KPY C    CG  F+    LT H   HTG++P   
Sbjct: 2   SSGSSGTGVKPYMC--NECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 3e-08
 Identities = 13/28 (46%), Positives = 15/28 (53%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK ++  S L  H   HTGEKP   
Sbjct: 16  NECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG +P+ C  C +AFS    L+ H   H
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKPY+C    CG  F ++  L  H R HTG +P   +
Sbjct: 2   SSGSSGTGEKPYKC--NECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 15/28 (53%), Positives = 18/28 (64%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK +T++SHL  H R HTG KP   
Sbjct: 16  NECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 7e-06
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P++C  C + F+++ HL+ H + H
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.4 bits (137), Expect = 5e-11
 Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC 346
           +   + +GEKPY+C    CG  F     L  H R H G      
Sbjct: 2   SSGSSGSGEKPYEC--NECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 12/29 (41%), Positives = 13/29 (44%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQCG 317
           N CGK +   S L  H RTH G      G
Sbjct: 16  NECGKAFIWKSLLIVHERTHAGVSGPSSG 44

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 9/34 (26%), Positives = 17/34 (50%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 +G++P++C  C +AF     L +H + H
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.4 bits (137), Expect = 5e-11
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC 346
           +   + TGE PY+C    CG  F+R D+L  H + H+G      
Sbjct: 2   SSGSSGTGENPYEC--CECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.2 bits (121), Expect = 6e-09
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQCG 317
             CGK +++   L +H +TH+G+     G
Sbjct: 16  CECGKVFSRKDQLVSHQKTHSGQSGPSSG 44

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                TG+ P++C  C + FSR D L  H K H
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 6e-11
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC 346
           +   + TGE+PY C    CG  F     L +H + HTG++P   
Sbjct: 2   SSGSSGTGERPYIC--TVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
             CGK +T  S+L  H + HTGEKP   
Sbjct: 16  TVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG+RP+ CT+C +AF+   +L  H K H
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 6e-11
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   + TGEKP +C    CG  F    +L  H R H  D+    +
Sbjct: 2   SSGSSGTGEKPCKC--TECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-08
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CGK +   S L  H RTH  +K    
Sbjct: 18  CGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 7e-05
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P +CT C +AF     L +H + H
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 7e-11
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   +  G+K ++C    C   F +S  LT H R HTG++P   +
Sbjct: 2   SSGSSGAGKKLFKC--NECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 16/28 (57%), Positives = 18/28 (64%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N C KT+T+SS L  H R HTGEKP   
Sbjct: 16  NECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 G + F+C  C++ F++S  L++H + H
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 8e-11
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC 346
           +   + TGEKPY+C    CG  F     L  H + HTG++P   
Sbjct: 2   SSGSSGTGEKPYRC--AECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 2e-08
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CGK +T  S+L  H + HTGEKP   
Sbjct: 18  CGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 TG++P++C  C +AF+   +L  H K H
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 9e-11
 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + +GEKP++C  + CG +F ++ +L  H R HTG++P   +
Sbjct: 3   SGSSGSGEKPFKC--EECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 14/26 (53%), Positives = 18/26 (69%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQC 316
           CGK +T++S L +H R HTGEKP   
Sbjct: 18  CGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 9/34 (26%), Positives = 18/34 (52%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 +G++PF+C  C + F+++  L  H + H
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF 344
               +  GEKPY+C    CG  F++   L  H R HTG  P 
Sbjct: 1   GSSGSSGGEKPYRC--DQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 46.0 bits (110), Expect = 2e-07
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPY 314
           + CGK +++   L  H+R HTG  P 
Sbjct: 15  DQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 10/33 (30%), Positives = 19/33 (57%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 G++P++C  C +AFS+   L +H++ H
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 54.4 bits (132), Expect = 2e-10
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF 344
               +  GEKPY C  + CG +F     L  H R HTG  P 
Sbjct: 1   GSSGSSGGEKPYPC--EICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 49.8 bits (120), Expect = 8e-09
 Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 8/39 (20%)

Query: 284 HTCSHNG--------CGKTYTKSSHLKAHLRTHTGEKPY 314
            + S  G        CG  +     LK+HLR HTG  P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 8/33 (24%), Positives = 14/33 (42%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 G++P+ C +C   F     L  H++ H
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + +GE+P++C    CG  F R   L  H R H+ ++    +
Sbjct: 3   SGSSGSGERPFKC--NECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-09
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           N CGK + + SHL  HLR H+ EK    
Sbjct: 16  NECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 +G+RPF+C  C + F R  HL+ H++ H
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   +  GEK ++C  + C   F+++  L  H   H G++P   +
Sbjct: 2   SSGSSGMGEKTWKC--RECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 8/41 (19%)

Query: 284 HTCSHNG--------CGKTYTKSSHLKAHLRTHTGEKPYQC 316
              S  G        C   ++++S L+ H   H GEKP   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 G++ ++C  C+  FS++  L LH   H
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              +  GE+ ++C    CG  F ++    +H R HTG++P   +
Sbjct: 3   SGSSGHGERGHRC--SDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 2e-07
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 8/41 (19%)

Query: 284 HTCSHNG--------CGKTYTKSSHLKAHLRTHTGEKPYQC 316
              S +G        CGK + ++S+   H R HTGEKP   
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 7/34 (20%), Positives = 15/34 (44%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                  G+R  +C+ C + F ++ +   H + H
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 53.3 bits (129), Expect = 5e-10
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF 344
              +  GEKPY+C  + CG +F +   L  H   HTG  P 
Sbjct: 2   SSGSSGGEKPYKC--ETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.0 bits (123), Expect = 4e-09
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 8/39 (20%)

Query: 284 HTCSHNG--------CGKTYTKSSHLKAHLRTHTGEKPY 314
            + S  G        CG  + + +HL+AH+  HTG  P 
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 G++P++C  C   F +  HL  H+  H
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.6 bits (127), Expect = 9e-10
 Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC 346
              + T  K Y C    CG  F R   LTRH + HT       
Sbjct: 3   SGSSGTDSKSYNC--NECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                T  + + C  C +AF+R  HL+ H K H
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.6 bits (101), Expect = 4e-06
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQCG 317
           N CGK +T+  HL  H + HT +     G
Sbjct: 16  NECGKAFTRIFHLTRHQKIHTRKSGPSSG 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 52.5 bits (127), Expect = 1e-09
 Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
           +   +  G  PY+C    C   F+    L  H R HT ++P   +
Sbjct: 2   SSGSSGAGVNPYKC--SQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 8/41 (19%)

Query: 284 HTCSHNG--------CGKTYTKSSHLKAHLRTHTGEKPYQC 316
              S  G        C K+++    L  H R HT EKP   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 8e-05
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 G  P++C+ CE++FS    L +H + H
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 53.5 bits (128), Expect = 1e-09
 Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 9/70 (12%)

Query: 297 KSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRS 356
            S       + H G++  +C    CG  F R   L+R        +   C  C +   + 
Sbjct: 2   SSGSSGKRQKIHLGDRSQKC--SKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQE 52

Query: 357 DHLSLHMKRH 366
             L+      
Sbjct: 53  AALNKDEGNE 62

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 38.9 bits (90), Expect = 2e-04
 Identities = 11/61 (18%), Positives = 19/61 (31%), Gaps = 11/61 (18%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP 343
             CS   CG  + + S       T +  K   C  + C     +   L +     +G + 
Sbjct: 19  QKCSK--CGIIFIRRS-------TLSRRKTPMC--EKCRKDSCQEAALNKDEGNESGKKT 67

Query: 344 F 344
            
Sbjct: 68  S 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 36.9 bits (85), Expect = 7e-04
 Identities = 11/37 (29%), Positives = 15/37 (40%)

Query: 326 ARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLH 362
             S    +  + H GDR  +C+ C   F R   LS  
Sbjct: 1   GSSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR 37

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.8 bits (125), Expect = 2e-09
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + +  K +QC    CG  F     L +H R HTG++P   +
Sbjct: 3   SGSSGSSTKSHQC--HECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.5 bits (114), Expect = 7e-08
 Identities = 14/28 (50%), Positives = 17/28 (60%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           + CG+ +T  SHL  H R HTGEKP   
Sbjct: 16  HECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 9/34 (26%), Positives = 14/34 (41%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 +  +  QC  C R F+   HL+ H + H
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 53.6 bits (128), Expect = 3e-09
 Identities = 16/79 (20%), Positives = 25/79 (31%), Gaps = 3/79 (3%)

Query: 291 CGKTYTKSSHLKAHLRT--HTGEKPYQCGWKG-CGWKFARSDELTRHFRKHTGDRPFQCT 347
           C   Y     L  H+    H  +  ++        W   R   L     K    +  +C 
Sbjct: 25  CSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM 84

Query: 348 LCERAFSRSDHLSLHMKRH 366
            C  +F     LS+HM + 
Sbjct: 85  YCGHSFESLQDLSVHMIKT 103

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 9/39 (23%), Positives = 15/39 (38%)

Query: 326 ARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMK 364
           +       +    TG   F+C  C  A+     L++HM 
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN 40

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 50.6 bits (122), Expect = 5e-09
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 306 RTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              +GEKP+ C    C   F+    L  H + H  ++P   +
Sbjct: 3   SGSSGEKPFGC--SCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 50.2 bits (121), Expect = 6e-09
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
             CS   C K ++  S+L  H +TH  EKP   
Sbjct: 11  FGCSC--CEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 12/29 (41%), Positives = 20/29 (68%)

Query: 338 HTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
            +G++PF C+ CE+AFS   +L +H + H
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 50.7 bits (121), Expect = 5e-09
 Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 273 RQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCG 317
               S R      C    CGK +    HL  H  +H+GEKPY  G
Sbjct: 2   SSGSSGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSG 44

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 43.4 bits (102), Expect = 2e-06
 Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 2/44 (4%)

Query: 306 RTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC 349
            +    K   C    CG  F     L RH   H+G++P+     
Sbjct: 5   SSGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 306 RTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF 344
              +G++ Y+C  + CG  F +   LT H R HTG  P 
Sbjct: 3   SGSSGQRVYEC--QECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 45.3 bits (108), Expect = 4e-07
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEKPY 314
             CGK++ +   L  H R HTG  P 
Sbjct: 14  QECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 336 RKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
              +G R ++C  C ++F +   L+LH + H
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERIH 33

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.6 bits (114), Expect = 7e-08
 Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT 347
              + +GEK + C    CG  F     L  H R H G++    +
Sbjct: 3   SGSSGSGEKSHTC--DECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.9 bits (107), Expect = 6e-07
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQC 316
           HTC  + CGK +   S L+ H R H GEK    
Sbjct: 13  HTC--DECGKNFCYISALRIHQRVHMGEKCSGP 43

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 46.2 bits (110), Expect = 2e-07
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 306 RTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC 346
              +GEKPY C    C   F+ ++ L +H + HT       
Sbjct: 3   SGSSGEKPYSC--AECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.9 bits (99), Expect = 6e-06
 Identities = 7/27 (25%), Positives = 14/27 (51%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCG 317
           C +T++ ++ L  H + HT +     G
Sbjct: 16  CKETFSDNNRLVQHQKMHTVKSGPSSG 42

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 41.2 bits (97), Expect = 1e-05
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 338 HTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
            +G++P+ C  C+  FS ++ L  H K H
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQKMH 33

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 48.8 bits (115), Expect = 2e-07
 Identities = 17/85 (20%), Positives = 25/85 (29%), Gaps = 2/85 (2%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDE--LTRHFRKHTGD 341
           +  +H G     T     + H  T   ++  +   K         DE             
Sbjct: 13  YLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAI 72

Query: 342 RPFQCTLCERAFSRSDHLSLHMKRH 366
             F C LC   FS S  L  H++  
Sbjct: 73  SQFVCPLCLMPFSSSVSLKQHIRYT 97

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 46.1 bits (108), Expect = 1e-06
 Identities = 14/72 (19%), Positives = 24/72 (33%), Gaps = 4/72 (5%)

Query: 295 YTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFS 354
               S     L        + C    C   F+ S  L +H R         C +C++ F+
Sbjct: 56  LLDESSYLYRLLASKAISQFVC--PLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFT 111

Query: 355 RSDHLSLHMKRH 366
            +D    H+ + 
Sbjct: 112 STDSALDHVCKK 123

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.0 bits (87), Expect = 9e-04
 Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 4/48 (8%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKH 338
           C   ++ S  LK H+R    E    C    C  +F  +D    H  K 
Sbjct: 80  CLMPFSSSVSLKQHIRYT--EHTKVCPV--CKKEFTSTDSALDHVCKK 123

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 46.1 bits (110), Expect = 2e-07
 Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 2/42 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF 344
               +  GE PY C    CG  F +   L  H R  +   P 
Sbjct: 1   GSSGSSGGETPYLC--GQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 45.0 bits (107), Expect = 4e-07
 Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 8/39 (20%)

Query: 284 HTCSHNG--------CGKTYTKSSHLKAHLRTHTGEKPY 314
            + S  G        CGK++T+   L  H R+ +   P 
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.5 bits (85), Expect = 4e-04
 Identities = 7/33 (21%), Positives = 16/33 (48%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                 G+ P+ C  C ++F++   L++H +  
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 41.8 bits (98), Expect = 6e-06
 Identities = 10/34 (29%), Positives = 19/34 (55%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
                  G+ PF+C+ C+R F++ ++L  H + H
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 40.6 bits (95), Expect = 2e-05
 Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP 343
           +   +  GE P++C    C   F + + L +H R H     
Sbjct: 2   SSGSSGAGENPFKC--SKCDRVFTQRNYLVQHERTHARKSG 40

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 32

 Score = 41.1 bits (96), Expect = 1e-05
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKHT 339
           ++PY C   GC   F R+ +L RH + H 
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 39.2 bits (92), Expect = 4e-05
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 342 RPFQCTLCERAFSRSDHLSLHMKRH 366
           R F C +C RAF+R +HL  H + H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEK 312
             C    C + + +  HLK H R+HT EK
Sbjct: 3   FVCEV--CTRAFARQEHLKRHYRSHTNEK 29

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 35.8 bits (83), Expect = 7e-04
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDR 342
           + + C    C   FAR + L RH+R HT ++
Sbjct: 1   RSFVCEV--CTRAFARQEHLKRHYRSHTNEK 29

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A Length = 29

 Score = 38.7 bits (90), Expect = 6e-05
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 344 FQCTLCERAFSRSDHLSLHMKRH 366
           F C  C + F RSDHL+LH+  H
Sbjct: 3   FACPECPKRFMRSDHLTLHILLH 25

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 Length = 33

 Score = 38.7 bits (90), Expect = 6e-05
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 344 FQCTLCERAFSRSDHLSLHMKRH 366
           F C  C + F RSDHLS H+  H
Sbjct: 3   FACPECPKRFMRSDHLSKHITLH 25

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 47

 Score = 38.7 bits (90), Expect = 1e-04
 Identities = 8/28 (28%), Positives = 18/28 (64%)

Query: 285 TCSHNGCGKTYTKSSHLKAHLRTHTGEK 312
            C   GC KT+ +  ++++H++TH  ++
Sbjct: 20  ECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 Length = 47

 Score = 36.4 bits (84), Expect = 7e-04
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGDR 342
           +K ++C + GC   F R   +  H + H  DR
Sbjct: 16  DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 45

 Score = 36.4 bits (83), Expect = 5e-04
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 338 HTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
            +G++P+ C +C   F R D +S H++ H
Sbjct: 5   SSGEKPYSCPVCGLRFKRKDRMSYHVRSH 33

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	366
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.89
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.87
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.86
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.85
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.84
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.83
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.81
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.8
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.8
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.75
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.74
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.74
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.72
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.71
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.71
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.7
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.69
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.69
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.68
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.67
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.66
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.62
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.6
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.6
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.58
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.58
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.57
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.55
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.54
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.53
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.5
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.5
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.47
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.46
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.46
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.46
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.45
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.44
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.43
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.43
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.43
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.41
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.4
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.4
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.39
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.38
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.38
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.37
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.37
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.36
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.35
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.33
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.33
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.32
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.32
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.31
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.3
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.29
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.29
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.26
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.25
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.25
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.23
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.18
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.17
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.16
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.14
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.14
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.13
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.11
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.1
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.09
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.09
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.09
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.03
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.03
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.02
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.02
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.01
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.01
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.0
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.0
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.99
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.98
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.97
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.96
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.94
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.93
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.92
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.91
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.9
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.89
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.88
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.88
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.88
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.87
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.87
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.86
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.86
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.84
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.84
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.83
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.81
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.81
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.81
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.81
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.8
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.79
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.79
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.73
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.72
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.7
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.69
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.69
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.66
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.57
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.51
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.5
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.48
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.48
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.48
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.48
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.48
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.47
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.47
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.47
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.46
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.46
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.46
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.46
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.46
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.46
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.46
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.46
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.46
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.46
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.45
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.45
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.45
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.45
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.45
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.45
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.45
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.45
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.45
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.44
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.44
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.44
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.44
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.44
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.44
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.44
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.44
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.44
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.43
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.43
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.43
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.43
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.43
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.43
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.43
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.43
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.43
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.43
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.43
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.43
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.43
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.43
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.43
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.43
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.43
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.42
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.42
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.42
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.42
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.42
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.42
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.42
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.42
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.42
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.42
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.42
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.42
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.42
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.41
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.41
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.41
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.41
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.4
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.4
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.4
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.4
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.39
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.39
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.39
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.39
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.38
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.38
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.38
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.37
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.37
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.37
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.36
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.35
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.35
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.35
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.34
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.34
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.33
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.31
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.3
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.29
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.28
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.25
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.23
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.22
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.22
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.22
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.2
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.2
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.19
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.17
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.16
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.14
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.13
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.13
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.11
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.08
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.08
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.07
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.07
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.06
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.06
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.05
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.04
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.01
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.0
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	97.98
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.97
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.97
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.96
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.95
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.94
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.9
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.89
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.88
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.87
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.06
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.82
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.78
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.78
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.78
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.76
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	97.75
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.75
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.74
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.74
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.72
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.72
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.85
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.68
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.67
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.67
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.64
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.8
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.63
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.62
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.62
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.61
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	97.61
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.6
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.59
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.57
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.56
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.54
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.54
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.53
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.52
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	97.51
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.5
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.5
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.59
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.58
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.43
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.43
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.37
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.35
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.24
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.07
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.66
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.73
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.34
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	92.64
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	90.68
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	82.0

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.89  E-value=1.6e-23  Score=184.35  Aligned_cols=132  Identities=34%  Similarity=0.614  Sum_probs=116.8

Q ss_pred             CCCcccccccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccce------eeeecCCCCCcccCchhHH
Q psy1991         229 VNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIM------HTCSHNGCGKTYTKSSHLK  302 (366)
Q Consensus       229 ~~P~iC~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~------H~C~~~~CgK~F~skssLk  302 (366)
                      ..++.|+.||+.|.....|..|... |... ..+.|..|++.|.....+..|++.      +.|..  |++.|.+...|.
T Consensus        47 ~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~  122 (190)
T 2i13_A           47 EKPYKCPECGKSFSDKKDLTRHQRT-HTGE-KPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPE--CGKSFSQLAHLR  122 (190)
T ss_dssp             -CCEECTTTCCEESSHHHHHHHHHH-HHCC-CCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTT--TCCEESSHHHHH
T ss_pred             CCCccCCCcCchhCCHHHHHHHHHh-cCCC-CCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHH
Confidence            4578999999999999999866543 4332 368999999999999999999754      44655  999999999999


Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|.|.+  |++.|.++..|..|+++|+++++|+|++|++.|.++..|.+|+++|
T Consensus       123 ~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H  184 (190)
T 2i13_A          123 AHQRTHTGEKPYKCPE--CGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH  184 (190)
T ss_dssp             HHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC
T ss_pred             HHHHHhCCCCCeECCC--CCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhc
Confidence            9999999999999955  9999999999999999999999999999999999999999999987

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.87  E-value=9.2e-23  Score=179.51  Aligned_cols=133  Identities=32%  Similarity=0.577  Sum_probs=106.6

Q ss_pred             CCCCcccccccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhccccee------eeecCCCCCcccCchhH
Q psy1991         228 RVNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMH------TCSHNGCGKTYTKSSHL  301 (366)
Q Consensus       228 r~~P~iC~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H------~C~~~~CgK~F~skssL  301 (366)
                      +..++.|++||+.|.....|..|.. .|.. ...+.|..|++.|.....+..|++.|      .|..  |++.|.+...|
T Consensus        18 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l   93 (190)
T 2i13_A           18 GEKPYACPECGKSFSRSDHLAEHQR-THTG-EKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPE--CGKSFSQRANL   93 (190)
T ss_dssp             -------------CCSSHHHHHGGG-CC----CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHH
T ss_pred             CCCCCcCCCCccccCCHHHHHHHHH-HcCC-CCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcc--cCCccCCHHHH
Confidence            3457999999999999999996644 4443 34689999999999999999998654      4655  99999999999


Q ss_pred             HHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         302 KAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       302 k~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ..|+++|.++++|.|.+  |++.|.+...|..|+++|+++++|+|++||+.|.++..|.+|+++|
T Consensus        94 ~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H  156 (190)
T 2i13_A           94 RAHQRTHTGEKPYACPE--CGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH  156 (190)
T ss_dssp             HHHHHHHHTCCCEECTT--TCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhc
Confidence            99999999999999955  9999999999999999999999999999999999999999999876

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=3.8e-22  Score=169.12  Aligned_cols=135  Identities=28%  Similarity=0.563  Sum_probs=115.8

Q ss_pred             CcccccccccccchhHhHhhhhc--cccCCCCccc-----cCCCCCccccchhhhcccce------eeeecCCCCCcccC
Q psy1991         231 SSSHGNYNKLHIHPYYQTHHHTQ--IFQTPSITIK-----SSLLSKPKRRQNWSRRKIIM------HTCSHNGCGKTYTK  297 (366)
Q Consensus       231 P~iC~~CGK~F~~~~~L~hHh~~--iH~~p~~~~k-----C~~Csk~f~~k~~l~~H~k~------H~C~~~~CgK~F~s  297 (366)
                      ++.|+.||+.|.+...|..|...  .|... ..+.     |..|++.|.....+..|++.      +.|..++|++.|.+
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~-~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGER-KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCS-SCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCC-cceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence            57899999999999999977654  34332 2444     44556999999999999865      44765679999999


Q ss_pred             chhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHh-hhhcCCCCeecCc--cccccCChhHHHHHhhcC
Q psy1991         298 SSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHF-RKHTGDRPFQCTL--CERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       298 kssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~-rtHtgeKpykC~~--CgKsFs~kssLk~H~KtH  366 (366)
                      ...|..|+++|+++++|.|+++.|++.|.++..|.+|+ ++|.++++|+|++  |++.|.+++.|.+|+++|
T Consensus        82 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h  153 (155)
T 2gli_A           82 LENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV  153 (155)
T ss_dssp             HHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhh
Confidence            99999999999999999994334999999999999998 7999999999998  999999999999999986

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.85  E-value=1.7e-21  Score=171.40  Aligned_cols=133  Identities=23%  Similarity=0.394  Sum_probs=77.2

Q ss_pred             CCccc--ccccccccchhHhHhhhhccccCCCCcccc--CCCCCccccchhhhccccee------eeecCCCCCcccCch
Q psy1991         230 NSSSH--GNYNKLHIHPYYQTHHHTQIFQTPSITIKS--SLLSKPKRRQNWSRRKIIMH------TCSHNGCGKTYTKSS  299 (366)
Q Consensus       230 ~P~iC--~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC--~~Csk~f~~k~~l~~H~k~H------~C~~~~CgK~F~sks  299 (366)
                      .++.|  +.||+.|.....|..|.. .|... ..+.|  ..|++.|.....|..|++.|      .|..+.|++.|.+..
T Consensus        11 ~~~~C~~~~C~~~f~~~~~L~~H~~-~h~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   88 (190)
T 1tf6_A           11 KRYICSFADCGAAYNKNWKLQAHLC-KHTGE-KPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKA   88 (190)
T ss_dssp             CCCBCSSTTTCCBCSSHHHHHHHHH-HHHCC-CSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHH
T ss_pred             cceeCCCCCCcchhCCHHHHHHHHH-hcCCC-CCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHH
Confidence            34566  466666666666664432 23222 24555  55666666666666665433      344224666666666


Q ss_pred             hHHHHH-Hhh-cCCCceec--CCCCCCCcccChHHHHHHhhhhcCCCCeecCc--cccccCChhHHHHHhhcC
Q psy1991         300 HLKAHL-RTH-TGEKPYQC--GWKGCGWKFARSDELTRHFRKHTGDRPFQCTL--CERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       300 sLk~H~-rtH-~~eKpf~C--~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~--CgKsFs~kssLk~H~KtH  366 (366)
                      .|..|+ +.| .++++|.|  .+  |++.|.+...|..|+++|+++++|+|++  |++.|.+++.|.+|+++|
T Consensus        89 ~l~~H~~~~h~~~~~~~~C~~~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H  159 (190)
T 1tf6_A           89 NMKKHFNRFHNIKICVYVCHFEN--CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH  159 (190)
T ss_dssp             HHHHHHHTTSSTTTSCCEECSSS--SCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSS
T ss_pred             HHHHHHHHhcCCCcceeeCCCCC--CccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHh
Confidence            666666 334 34556666  44  6666666666666666666666666655  666666666666666655

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.84  E-value=7.6e-21  Score=154.05  Aligned_cols=112  Identities=36%  Similarity=0.629  Sum_probs=99.2

Q ss_pred             CCCccccc--ccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceeeeecCCCCCcccCchhHHHHHH
Q psy1991         229 VNSSSHGN--YNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLR  306 (366)
Q Consensus       229 ~~P~iC~~--CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F~skssLk~H~r  306 (366)
                      ..++.|+.  ||+.|.+...|..|.. .|...                       +.+.|.++.|++.|.+...|..|++
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~-----------------------~~~~C~~~~C~~~f~~~~~l~~H~~   59 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHSR-KHTGE-----------------------KPYQCDFKDCERRFSRSDQLKRHQR   59 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHHH-HHHTT-----------------------CCEECCSTTCCCEESSHHHHHHHHH
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHHH-hhCCC-----------------------CCccCCCCCCcCccCCHHHHHHHHH
Confidence            45799997  9999999999996644 44321                       2466875569999999999999999


Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeec--CccccccCChhHHHHHhhcC
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC--TLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC--~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++++|.|.+  |++.|.+...|.+|+++|+++++|+|  +.||+.|.+++.|.+|+++|
T Consensus        60 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           60 RHTGVKPFQCKT--CQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHCCCCEECTT--TCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HcCCCCCccCCc--cCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            999999999955  99999999999999999999999999  89999999999999999998

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.83  E-value=1.2e-20  Score=165.87  Aligned_cols=134  Identities=20%  Similarity=0.327  Sum_probs=115.7

Q ss_pred             CCCCccc--ccccccccchhHhHhhhhccccCCCCccccC--CCCCccccchhhhccc-ce-------eeeecCCCCCcc
Q psy1991         228 RVNSSSH--GNYNKLHIHPYYQTHHHTQIFQTPSITIKSS--LLSKPKRRQNWSRRKI-IM-------HTCSHNGCGKTY  295 (366)
Q Consensus       228 r~~P~iC--~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~--~Csk~f~~k~~l~~H~-k~-------H~C~~~~CgK~F  295 (366)
                      +..++.|  +.||+.|.+...|..|. +.|... ..+.|.  .|++.|.....+..|+ +.       +.|.++.|++.|
T Consensus        39 ~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f  116 (190)
T 1tf6_A           39 GEKPFPCKEEGCEKGFTSLHHLTRHS-LTHTGE-KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAF  116 (190)
T ss_dssp             CCCSSCCSSTTCCCCCSSHHHHHHHH-TTTTTC-CCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEEC
T ss_pred             CCCCccCCCCCCChhhCCHHHHHHHH-HHccCC-CceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCcccc
Confidence            3457899  89999999999999665 445433 368898  8999999999999987 33       446335699999


Q ss_pred             cCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc---cccccCChhHHHHHhhcC
Q psy1991         296 TKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL---CERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       296 ~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~---CgKsFs~kssLk~H~KtH  366 (366)
                      .+...|..|+++|+++++|.|.++.|++.|.++..|.+|+++|++   |+|..   |++.|.+...|.+|+++|
T Consensus       117 ~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h  187 (190)
T 1tf6_A          117 KKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAEC  187 (190)
T ss_dssp             SSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCCCCCcCCCccccHHHHHHHHHhh
Confidence            999999999999999999999322399999999999999999998   99999   999999999999999987

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.81  E-value=1.3e-19  Score=154.17  Aligned_cols=121  Identities=32%  Similarity=0.581  Sum_probs=100.1

Q ss_pred             CCCcccccccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceeeeecCCCCCcccCchhHHHHHHhh
Q psy1991         229 VNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTH  308 (366)
Q Consensus       229 ~~P~iC~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F~skssLk~H~rtH  308 (366)
                      ..++.|+.||+.|.+...|..|....|..... .....|              ..+.|..  |++.|.+...|..|+++|
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~-~~~~~~--------------~~~~C~~--C~~~f~~~~~l~~H~~~h   85 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPE-QNNHVC--------------YWEECPR--EGKSFKAKYKLVNHIRVH   85 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTT-CSSCCC--------------CBTTCTT--SSCCCSSHHHHHHHTHHH
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcCCCcc-cCCccc--------------cccCCCC--cccccCCHHHHHHHHHhc
Confidence            34688999999999999999776665654321 111111              1245766  999999999999999999


Q ss_pred             cCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc--cccccCChhHHHHHhhcC
Q psy1991         309 TGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL--CERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       309 ~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~--CgKsFs~kssLk~H~KtH  366 (366)
                      +++++|.|.++.|++.|.+...|.+|+++|+++++|+|++  |++.|.++..|.+|+++|
T Consensus        86 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H  145 (155)
T 2rpc_A           86 TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH  145 (155)
T ss_dssp             HCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTT
T ss_pred             CCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHh
Confidence            9999999954459999999999999999999999999997  999999999999999987

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=1.7e-19  Score=146.81  Aligned_cols=110  Identities=26%  Similarity=0.538  Sum_probs=95.4

Q ss_pred             CCCCcccccccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceeeeecCCCCCcccCchhHHHHHHh
Q psy1991         228 RVNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRT  307 (366)
Q Consensus       228 r~~P~iC~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F~skssLk~H~rt  307 (366)
                      +..++.|++|++.|.+...|..|.. .|...                       +.+.|..  |++.|.+...|..|++.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-----------------------~~~~C~~--C~~~f~~~~~l~~H~~~   57 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNR-KHTGE-----------------------KPFECPK--CGKCYFRKENLLEHEAR   57 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHH-HHSSC-----------------------CSCBCTT--TCCBCSSHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHH-hCCCC-----------------------CCeECCC--CCchhcCHHHHHHHHhh
Confidence            3467899999999999999986643 34321                       2456776  99999999999999996


Q ss_pred             ---hcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhc
Q psy1991         308 ---HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKR  365 (366)
Q Consensus       308 ---H~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~Kt  365 (366)
                         |.++++|.|.+  |++.|.+...|..|+++|+++++|+|++|++.|.++..|.+|+++
T Consensus        58 ~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  116 (124)
T 2dlq_A           58 NCMNRSEQVFTCSV--CQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK  116 (124)
T ss_dssp             CCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             hhcCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHH
Confidence               57889999955  999999999999999999999999999999999999999999873

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.80  E-value=7.3e-20  Score=149.87  Aligned_cols=111  Identities=37%  Similarity=0.729  Sum_probs=96.2

Q ss_pred             CCCcccc--cccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceeeeecCCCCCcccCchhHHHHHH
Q psy1991         229 VNSSSHG--NYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLR  306 (366)
Q Consensus       229 ~~P~iC~--~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F~skssLk~H~r  306 (366)
                      +.++.|+  .||+.|.+...|..|. +.|. +                       +.+.|..  |++.|.+...|..|++
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~-~-----------------------~~~~C~~--C~~~f~~~~~l~~H~~   55 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHL-HTHG-P-----------------------RVHVCAE--CGKAFVESSKLKRHQL   55 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHH-GGGS-C-----------------------CCEECTT--TCCEESSHHHHHHHGG
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHH-HHcC-C-----------------------CCeECCC--CCchhCCHHHHHHHHH
Confidence            4578999  9999999999998664 3441 1                       2356766  9999999999999999


Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecC--ccccccCChhHHHHHhhcC
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT--LCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~--~CgKsFs~kssLk~H~KtH  366 (366)
                      +|.++++|.|.++.|++.|.+...|.+|+++|+++++|.|+  .|++.|.+++.|.+|+++|
T Consensus        56 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  117 (124)
T 1ubd_C           56 VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH  117 (124)
T ss_dssp             GTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             HcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHH
Confidence            99999999996446999999999999999999999999996  5999999999999999986

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.75  E-value=1.7e-18  Score=133.63  Aligned_cols=86  Identities=83%  Similarity=1.498  Sum_probs=80.6

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHH
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLS  360 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk  360 (366)
                      .+.+.|..++|++.|.+...|..|+++|.++++|.|.++.|++.|.....|.+|+++|+++++|.|++|++.|.+.+.|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            35677988889999999999999999999999999964469999999999999999999999999999999999999999


Q ss_pred             HHhhcC
Q psy1991         361 LHMKRH  366 (366)
Q Consensus       361 ~H~KtH  366 (366)
                      +|+++|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            999987

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.74  E-value=3.1e-18  Score=134.88  Aligned_cols=87  Identities=75%  Similarity=1.395  Sum_probs=81.3

Q ss_pred             ccceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHH
Q psy1991         280 KIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHL  359 (366)
Q Consensus       280 H~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssL  359 (366)
                      ..+.+.|.+++|++.|.+...|..|+++|.++++|.|.++.|++.|.....|.+|+++|+++++|+|++|++.|.+...|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            44567899888999999999999999999999999995446999999999999999999999999999999999999999


Q ss_pred             HHHhhcC
Q psy1991         360 SLHMKRH  366 (366)
Q Consensus       360 k~H~KtH  366 (366)
                      .+|+++|
T Consensus        92 ~~H~~~H   98 (100)
T 2ebt_A           92 ALHMKRH   98 (100)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999987

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.74  E-value=3.6e-18  Score=131.99  Aligned_cols=83  Identities=45%  Similarity=0.913  Sum_probs=78.3

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHH
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSL  361 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~  361 (366)
                      +.+.|.++.|++.|.+...|..|+++|.++++|.|.+  |++.|.+...|..|+++|+++++|.|++|++.|.+.+.|.+
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCC--CCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            4577876679999999999999999999999999955  99999999999999999999999999999999999999999


Q ss_pred             HhhcC
Q psy1991         362 HMKRH  366 (366)
Q Consensus       362 H~KtH  366 (366)
                      |+++|
T Consensus        81 H~~~H   85 (90)
T 1a1h_A           81 HTKIH   85 (90)
T ss_dssp             HHGGG
T ss_pred             HHHHh
Confidence            99987

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.72  E-value=4.4e-18  Score=145.44  Aligned_cols=106  Identities=20%  Similarity=0.287  Sum_probs=74.7

Q ss_pred             hhhccccCCCCccccCCCCCccccchhhhcccceee----eecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcc
Q psy1991         250 HHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHT----CSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKF  325 (366)
Q Consensus       250 Hh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~----C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF  325 (366)
                      |+..+|... ..+.|..|++.|.....|..|++.|.    ..|+.|++.|.+...|..|+++|+++++|.|.+  |++.|
T Consensus        12 h~~~~h~Ge-k~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F   88 (133)
T 2lt7_A           12 HYELIVDGR-VYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLA--CGKSF   88 (133)
T ss_dssp             EEEEEETTE-EEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESS--SCCEE
T ss_pred             hceeecCCC-cCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCC--CCCCc
Confidence            444555433 36778888888888888877775542    223338888888888888888888888888844  88888


Q ss_pred             cChHHHHHHhhhhcCCC------CeecCccccccCChhH
Q psy1991         326 ARSDELTRHFRKHTGDR------PFQCTLCERAFSRSDH  358 (366)
Q Consensus       326 ~sk~~L~~H~rtHtgeK------pykC~~CgKsFs~kss  358 (366)
                      .++..|..|+++|++++      +|+|.+|++.|.+...
T Consensus        89 ~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~~  127 (133)
T 2lt7_A           89 INYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYA  127 (133)
T ss_dssp             SSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCCCH
T ss_pred             CCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhccc
Confidence            88888888888776653      4778888887776544

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.71  E-value=8.9e-18  Score=127.37  Aligned_cols=79  Identities=38%  Similarity=0.921  Sum_probs=74.9

Q ss_pred             eeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHh
Q psy1991         284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHM  363 (366)
Q Consensus       284 H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~  363 (366)
                      +.|..  |++.|.+...|..|+++|.++++|.|.+  |++.|.....|.+|+++|+++++|.|++|++.|.+.+.|.+|+
T Consensus         2 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   77 (82)
T 2kmk_A            2 FDCKI--CGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHS   77 (82)
T ss_dssp             EECSS--SCCEESSHHHHHHHHHHHHTCCCEECSS--SCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHH
T ss_pred             ccCCC--CcccccCchhHHHHHHHcCCCCCeeCCc--CChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHH
Confidence            45666  9999999999999999999999999955  9999999999999999999999999999999999999999999


Q ss_pred             hcC
Q psy1991         364 KRH  366 (366)
Q Consensus       364 KtH  366 (366)
                      ++|
T Consensus        78 ~~H   80 (82)
T 2kmk_A           78 RKH   80 (82)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            986

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.71  E-value=8.7e-18  Score=143.60  Aligned_cols=82  Identities=30%  Similarity=0.629  Sum_probs=76.5

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHH
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLS  360 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk  360 (366)
                      .+.+.|..  ||+.|.+...|..|+++|+++++|.|.+  |++.|.+...|..|+++|+|++||.|++||+.|.+++.|.
T Consensus        20 ek~y~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~   95 (133)
T 2lt7_A           20 RVYYICIV--CKRSYVCLTSLRRHFNIHSWEKKYPCRY--CEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMS   95 (133)
T ss_dssp             EEEEEETT--TCCEESCHHHHHHHHHHHHCCSCEECSS--SSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHH
T ss_pred             CcCeECCC--CCCCcCCHHHHHHHHHHcCCCCCeeCCc--cCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHH
Confidence            35677877  9999999999999999999999999955  9999999999999999999999999999999999999999


Q ss_pred             HHhhcC
Q psy1991         361 LHMKRH  366 (366)
Q Consensus       361 ~H~KtH  366 (366)
                      .|+++|
T Consensus        96 ~H~~~h  101 (133)
T 2lt7_A           96 SHIKSV  101 (133)
T ss_dssp             HHHHHH
T ss_pred             HHhHHh
Confidence            999874

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=1.5e-17  Score=140.74  Aligned_cols=106  Identities=29%  Similarity=0.564  Sum_probs=95.3

Q ss_pred             ccccCCCCCccccchhhhcccc---------eeeee---cCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccCh
Q psy1991         261 TIKSSLLSKPKRRQNWSRRKII---------MHTCS---HNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARS  328 (366)
Q Consensus       261 ~~kC~~Csk~f~~k~~l~~H~k---------~H~C~---~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk  328 (366)
                      .+.|..|++.|.....|..|++         .+.|.   |..|++.|.+...|..|+++|+++++|.|.++.|++.|.+.
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~   82 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRL   82 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSH
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCH
Confidence            5789999999999999999975         24465   44467999999999999999999999999644699999999


Q ss_pred             HHHHHHhhhhcCCCCeecCc--cccccCChhHHHHHh-hcC
Q psy1991         329 DELTRHFRKHTGDRPFQCTL--CERAFSRSDHLSLHM-KRH  366 (366)
Q Consensus       329 ~~L~~H~rtHtgeKpykC~~--CgKsFs~kssLk~H~-KtH  366 (366)
                      ..|..|+++|+++++|.|++  |++.|.+.+.|.+|+ ++|
T Consensus        83 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H  123 (155)
T 2gli_A           83 ENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH  123 (155)
T ss_dssp             HHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             HHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhc
Confidence            99999999999999999998  999999999999998 666

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=2.4e-17  Score=129.07  Aligned_cols=81  Identities=41%  Similarity=0.904  Sum_probs=76.6

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHH
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSL  361 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~  361 (366)
                      +.+.|..  |++.|.+...|..|+++|.++++|.|.+  |++.|.....|.+|+++|+++++|+|++|++.|.+...|.+
T Consensus         7 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            7 GPHKCEV--CGKCFSRKDKLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCBTT--TTBCCCCHHHHHHHGGGCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             cCeECCC--CCCccCCHHHHHHHHHhcCCCCCEeCCC--CCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            4566877  9999999999999999999999999955  99999999999999999999999999999999999999999


Q ss_pred             HhhcC
Q psy1991         362 HMKRH  366 (366)
Q Consensus       362 H~KtH  366 (366)
                      |+++|
T Consensus        83 H~~~h   87 (96)
T 2dmd_A           83 HLRSH   87 (96)
T ss_dssp             HHTTC
T ss_pred             HHHHh
Confidence            99987

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.69  E-value=3.4e-17  Score=130.70  Aligned_cols=82  Identities=39%  Similarity=0.773  Sum_probs=77.2

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHH
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLS  360 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk  360 (366)
                      .+.+.|..  |++.|.+...|..|+++|.++++|.|.+  |++.|.....|.+|+++|+++++|+|++|++.|.+...|.
T Consensus        15 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   90 (106)
T 2ee8_A           15 KKEFICKF--CGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLA   90 (106)
T ss_dssp             CCCCBCSS--SCCBCSSHHHHHHHHHHHCCSCCCBCSS--SCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHH
T ss_pred             CcCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCCC--ccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHH
Confidence            34566877  9999999999999999999999999955  9999999999999999999999999999999999999999


Q ss_pred             HHhhcC
Q psy1991         361 LHMKRH  366 (366)
Q Consensus       361 ~H~KtH  366 (366)
                      +|+++|
T Consensus        91 ~H~~~H   96 (106)
T 2ee8_A           91 VHKTLH   96 (106)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            999987

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.68  E-value=4.9e-17  Score=131.47  Aligned_cols=86  Identities=56%  Similarity=1.032  Sum_probs=79.5

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHH
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLS  360 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk  360 (366)
                      .+.+.|..++|++.|.+...|..|+++|.++++|.|.++.|++.|.+...|..|+++|+++++|.|++|++.|.+...|.
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   83 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLK   83 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHH
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHH
Confidence            34577887789999999999999999999999999963369999999999999999999999999999999999999999


Q ss_pred             HHhhcC
Q psy1991         361 LHMKRH  366 (366)
Q Consensus       361 ~H~KtH  366 (366)
                      +|+++|
T Consensus        84 ~H~~~h   89 (119)
T 2jp9_A           84 THTRTH   89 (119)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            999876

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=1.3e-16  Score=124.72  Aligned_cols=81  Identities=43%  Similarity=0.922  Sum_probs=75.4

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCC--CCeecCccccccCChhHH
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGD--RPFQCTLCERAFSRSDHL  359 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtge--KpykC~~CgKsFs~kssL  359 (366)
                      +.+.|..  |++.|.+...|..|+++|.++++|.|.+  |++.|.+...|..|+++|+++  ++|+|++|++.|.++..|
T Consensus         6 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L   81 (95)
T 2yt9_A            6 SGVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHL   81 (95)
T ss_dssp             SCEECSS--SCCEESSSHHHHHHHHHSCSSCSEECSS--SCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHH
T ss_pred             CCeECCC--CCCccCChHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHH
Confidence            4566777  9999999999999999999999999955  999999999999999999987  999999999999999999


Q ss_pred             HHHhh-cC
Q psy1991         360 SLHMK-RH  366 (366)
Q Consensus       360 k~H~K-tH  366 (366)
                      .+|++ +|
T Consensus        82 ~~H~~~~H   89 (95)
T 2yt9_A           82 NGHIKQVH   89 (95)
T ss_dssp             HHHHHHTS
T ss_pred             HHHHHHhc
Confidence            99986 56

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=1.1e-16  Score=128.80  Aligned_cols=81  Identities=35%  Similarity=0.800  Sum_probs=76.2

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHH
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLS  360 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk  360 (366)
                      .+.+.| .  |++.|.+...|..|++.|.++++|.|.+  |++.|.+...|.+|+++|+++++|+|++|++.|.++..|.
T Consensus         8 ~k~~~C-~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            8 DKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCEec-c--CCCccCCHHHHHHHHHHcCCCcCccCCC--CCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            456778 6  9999999999999999999999999955  9999999999999999999999999999999999999999


Q ss_pred             HHhhcC
Q psy1991         361 LHMKRH  366 (366)
Q Consensus       361 ~H~KtH  366 (366)
                      +|+++|
T Consensus        83 ~H~~~~   88 (110)
T 2csh_A           83 RHVTSC   88 (110)
T ss_dssp             HHHHHH
T ss_pred             HHHHHc
Confidence            999875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.62  E-value=5.9e-16  Score=117.75  Aligned_cols=80  Identities=30%  Similarity=0.631  Sum_probs=73.0

Q ss_pred             eeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc---cccccCChhHHH
Q psy1991         284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL---CERAFSRSDHLS  360 (366)
Q Consensus       284 H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~---CgKsFs~kssLk  360 (366)
                      +.|.++.|++.|.+...|..|+++|.++++|.|.++.|++.|.+...|.+|+++|++   |.|+.   |++.|.+.+.|.
T Consensus         2 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~   78 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYL   78 (85)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHH
T ss_pred             ccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHH
Confidence            457446699999999999999999999999999333399999999999999999998   99999   999999999999


Q ss_pred             HHhhcC
Q psy1991         361 LHMKRH  366 (366)
Q Consensus       361 ~H~KtH  366 (366)
                      +|+++|
T Consensus        79 ~H~~~h   84 (85)
T 2j7j_A           79 KHVAEC   84 (85)
T ss_dssp             HHHHHC
T ss_pred             HHHHhc
Confidence            999986

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=9.1e-16  Score=116.16  Aligned_cols=74  Identities=23%  Similarity=0.553  Sum_probs=67.6

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHH-hhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccC
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLR-THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFS  354 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~r-tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs  354 (366)
                      .+.+.|.+++|++.|.+...|..|++ .|.++++|.|.++.|++.|.++..|.+|+++|+++++|+|++||++|.
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            35677998999999999999999999 799999999943349999999999999999999999999999999984

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.60  E-value=1.2e-15  Score=124.56  Aligned_cols=82  Identities=40%  Similarity=0.803  Sum_probs=75.6

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc--cccccCChhHH
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL--CERAFSRSDHL  359 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~--CgKsFs~kssL  359 (366)
                      +.+.|.+++|++.|.+...|..|+++| ++++|.|.+  |++.|.+...|..|+++|.++++|.|.+  |++.|.+...|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTT--TCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            456788667999999999999999999 889999955  9999999999999999999999999986  99999999999


Q ss_pred             HHHhhcC
Q psy1991         360 SLHMKRH  366 (366)
Q Consensus       360 k~H~KtH  366 (366)
                      .+|+++|
T Consensus        81 ~~H~~~h   87 (124)
T 1ubd_C           81 RTHVRIH   87 (124)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999875

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=5.4e-16  Score=125.67  Aligned_cols=81  Identities=20%  Similarity=0.397  Sum_probs=73.0

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHh--hcCCCcee-cCCCCCCCcc--cChHHHHHHhhhhcCCCCeecCccccccCCh
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRT--HTGEKPYQ-CGWKGCGWKF--ARSDELTRHFRKHTGDRPFQCTLCERAFSRS  356 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rt--H~~eKpf~-C~i~~CgKsF--~sk~~L~~H~rtHtgeKpykC~~CgKsFs~k  356 (366)
                      +.+.|..  |++.|.+...|..|+++  |.+++++. |.+  |++.|  ..+..|..|+++|+++++|+|++|++.|.++
T Consensus        18 ~~~~C~~--C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~--C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~   93 (115)
T 2dmi_A           18 SKFRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETDNN--NPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESL   93 (115)
T ss_dssp             CSEEBSS--SSCEESSHHHHHHHHHHTCCCBCSCCCCCCC--CCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSH
T ss_pred             CCEECCc--cCchhcCHHHHHHHHHHhCccccCCCccCCC--CCcccccccHHHHHHHhhccCCCcceECCCCCCccCCH
Confidence            4456766  99999999999999999  77777655 955  99999  9999999999999999999999999999999


Q ss_pred             hHHHHHhhcC
Q psy1991         357 DHLSLHMKRH  366 (366)
Q Consensus       357 ssLk~H~KtH  366 (366)
                      +.|.+|+++|
T Consensus        94 ~~L~~H~~~h  103 (115)
T 2dmi_A           94 QDLSVHMIKT  103 (115)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHh
Confidence            9999999875

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.58  E-value=1.2e-15  Score=114.26  Aligned_cols=55  Identities=35%  Similarity=0.758  Sum_probs=43.3

Q ss_pred             CCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         310 GEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       310 ~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .||||.|.  .||+.|.....|.+|+++|+|++||+|++||++|.+++.|.+|+++|
T Consensus         1 SEKpy~C~--~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~H   55 (60)
T 4gzn_C            1 SERPFFCN--FCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVH   55 (60)
T ss_dssp             CCCCEECT--TTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGG
T ss_pred             CCCCccCC--CCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCcc
Confidence            36788884  48888888888888888888888888888888888888888888776

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.57  E-value=1.4e-15  Score=122.19  Aligned_cols=78  Identities=19%  Similarity=0.350  Sum_probs=70.0

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHH
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSL  361 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~  361 (366)
                      +.+.|..  |++.|.+...|..|+++|  +++|.|.+  |++.|.....|.+|++ |+++++|+|++|++.|.++..|.+
T Consensus        15 ~~~~C~~--C~~~f~~~~~l~~H~~~H--~~~~~C~~--C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~   87 (107)
T 1wjp_A           15 EVYQCRL--CNAKLSSLLEQGSHERLC--RNAAVCPY--CSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWR   87 (107)
T ss_dssp             CCCBCTT--TCCBCSSHHHHHHHHHHH--HHSBCCTT--TCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHH
T ss_pred             cCeECCC--CCCccCCHHHHHHHHHHC--CCCccCCC--CCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHH
Confidence            4566766  999999999999999998  47899955  9999999999999996 999999999999999999999999


Q ss_pred             Hhh-cC
Q psy1991         362 HMK-RH  366 (366)
Q Consensus       362 H~K-tH  366 (366)
                      |++ +|
T Consensus        88 H~~~~H   93 (107)
T 1wjp_A           88 HQVEVH   93 (107)
T ss_dssp             HHHHTS
T ss_pred             HHHHHc
Confidence            997 65

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.55  E-value=4.2e-15  Score=120.59  Aligned_cols=81  Identities=36%  Similarity=0.726  Sum_probs=74.6

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhh---hcCCCCeecCccccccCChhH
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRK---HTGDRPFQCTLCERAFSRSDH  358 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rt---HtgeKpykC~~CgKsFs~kss  358 (366)
                      +.+.|..  |++.|.+...|..|+++|.++++|.|.+  |++.|.+...|.+|++.   |.++++|.|++|++.|.+...
T Consensus         6 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~   81 (124)
T 2dlq_A            6 SGVECPT--CHKKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRME   81 (124)
T ss_dssp             SSCCCTT--TCCCCSSHHHHHHHHHHHSSCCSCBCTT--TCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHH
T ss_pred             CCCCCCC--CCCcCCCHHHHHHHHHhCCCCCCeECCC--CCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHH
Confidence            4466777  9999999999999999999999999955  99999999999999985   578899999999999999999


Q ss_pred             HHHHhhcC
Q psy1991         359 LSLHMKRH  366 (366)
Q Consensus       359 Lk~H~KtH  366 (366)
                      |.+|+++|
T Consensus        82 l~~H~~~h   89 (124)
T 2dlq_A           82 LRLHMVSH   89 (124)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHc
Confidence            99999875

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.54  E-value=1.7e-14  Score=114.95  Aligned_cols=90  Identities=23%  Similarity=0.364  Sum_probs=77.4

Q ss_pred             CCCcccccccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceeeeecCCCCCcccCchhHHHHHHhh
Q psy1991         229 VNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTH  308 (366)
Q Consensus       229 ~~P~iC~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F~skssLk~H~rtH  308 (366)
                      ..++.|++|++.|.....|..|.. .|..                       .+.+.|..  |++.|.+...|..|+++|
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-----------------------~~~~~C~~--C~~~f~~~~~l~~H~~~h   68 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHER-THTD-----------------------ERPYTCDI--CHKAFRRQDHLRDHRYIH   68 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHH-HHCC-----------------------SCCCBCSS--SCCBCSCHHHHHHHGGGS
T ss_pred             CcCeECCCCCCccCCHHHHHHHHH-HcCC-----------------------CCCcCCCC--ccchhCCHHHHHHHHHHh
Confidence            457899999999999999986643 3331                       12356777  999999999999999999


Q ss_pred             cCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeec
Q psy1991         309 TGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC  346 (366)
Q Consensus       309 ~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC  346 (366)
                      +++++|.|.+  |++.|.+...|.+|+++|+++++|.+
T Consensus        69 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           69 SKEKPFKCQE--CGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             CCCCTTSCSS--SCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCeECCC--cCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            9999999955  99999999999999999999999865

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.53  E-value=8.8e-16  Score=119.48  Aligned_cols=79  Identities=41%  Similarity=0.689  Sum_probs=73.3

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHH
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSL  361 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~  361 (366)
                      +.+.|..  |++.|.+...|..|+++|.++++|.|.+  |++.|.....|.+|+++|++ .+|.|+.|++.|.....|..
T Consensus         2 k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~   76 (88)
T 1llm_C            2 KPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLEN   76 (88)
T ss_dssp             CCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCC--CCCccCCHHHHHHHHHHcCCCCCccCCC--CCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHH
Confidence            4567777  9999999999999999999999999955  99999999999999999985 78999999999999999999


Q ss_pred             Hhhc
Q psy1991         362 HMKR  365 (366)
Q Consensus       362 H~Kt  365 (366)
                      |++.
T Consensus        77 H~~~   80 (88)
T 1llm_C           77 EVAR   80 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.50  E-value=6.3e-14  Score=109.47  Aligned_cols=88  Identities=27%  Similarity=0.430  Sum_probs=75.1

Q ss_pred             CCCcccccccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceeeeecCCCCCcccCchhHHHHHHhh
Q psy1991         229 VNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTH  308 (366)
Q Consensus       229 ~~P~iC~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F~skssLk~H~rtH  308 (366)
                      ..|+.|++|++.|.....|..|.. .|..                       .+.+.|..  |++.|.+...|..|+++|
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-----------------------~~~~~C~~--C~~~f~~~~~l~~H~~~h   59 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHMR-CHTG-----------------------VKPYKCKT--CDYAAADSSSLNKHLRIH   59 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHGG-GCCC-----------------------CCSEECSS--SCCEESSHHHHHHHHHHS
T ss_pred             CcCeECCCCCCccCCHHHHHHHHH-hcCC-----------------------CCCEeCCC--CCCccCCHHHHHHHHHHh
Confidence            457899999999999999986644 3321                       12466777  999999999999999999


Q ss_pred             cCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCe
Q psy1991         309 TGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF  344 (366)
Q Consensus       309 ~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpy  344 (366)
                      +++++|.|.+  |++.|.+...|..|+++|+++++.
T Consensus        60 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           60 SDERPFKCQI--CPYASRNSSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             CCCCCEECSS--SSCEESSHHHHHHHHTTCCSCCCC
T ss_pred             CCCCCccCCC--CCCccCCHHHHHHHHHHhcCCCCC
Confidence            9999999955  999999999999999999998753

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=4.5e-15  Score=118.69  Aligned_cols=74  Identities=14%  Similarity=0.219  Sum_probs=63.5

Q ss_pred             CCCcccCchhHHHHHHhhcCCCceecCCCCCCCccc-ChHHHHHHhhhhcC-CCCeecCccccccCChhHHHHHhhcC
Q psy1991         291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFA-RSDELTRHFRKHTG-DRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       291 CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~-sk~~L~~H~rtHtg-eKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +...+.....+..|+++|.++++|.|.+  |++.|. .+..|.+|+++|++ +++|+|++|++.|.++..|.+|+++|
T Consensus         2 ss~s~~~~~~~~~h~~~h~~~~~~~C~~--C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h   77 (98)
T 2gqj_A            2 SSGSSGPGGPEEQWQRAIHERGEAVCPT--CNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAE   77 (98)
T ss_dssp             CCCCCCCCCSCSHHHHTTTTTSCCCCTT--TCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHH
T ss_pred             CCCCCCCCCcHHHHHHHhccCCCcCCCC--CCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHH
Confidence            3456677778888999999999999954  999999 99999999999988 88999999999999999999998765

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.47  E-value=5e-14  Score=119.45  Aligned_cols=82  Identities=30%  Similarity=0.677  Sum_probs=73.8

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHHh-hcCCCc--------eecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc--c
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLRT-HTGEKP--------YQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL--C  349 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~rt-H~~eKp--------f~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~--C  349 (366)
                      ...+.|..  |++.|.+...|..|++. |.++++        |.|.+  |++.|.....|..|+++|+++++|.|.+  |
T Consensus        23 ~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   98 (155)
T 2rpc_A           23 QLSRPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKPFPCPFPGC   98 (155)
T ss_dssp             CCSSSCCC--CCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTT--SSCCCSSHHHHHHHTHHHHCCCSEECSCTTT
T ss_pred             hccccccc--CCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCC--cccccCCHHHHHHHHHhcCCCCcccCCcCCC
Confidence            34455766  99999999999999998 777654        78955  9999999999999999999999999998  9


Q ss_pred             ccccCChhHHHHHhhcC
Q psy1991         350 ERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       350 gKsFs~kssLk~H~KtH  366 (366)
                      ++.|.+...|.+|+++|
T Consensus        99 ~~~f~~~~~L~~H~~~h  115 (155)
T 2rpc_A           99 GKIFARSENLKIHKRTH  115 (155)
T ss_dssp             CCEESCHHHHHHHHTTT
T ss_pred             CCccCCHHHHHHHHHhh
Confidence            99999999999999987

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.46  E-value=6.9e-14  Score=105.74  Aligned_cols=82  Identities=34%  Similarity=0.502  Sum_probs=69.6

Q ss_pred             CcccccccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceeeeecCCCCCcccCchhHHHHHHhhcC
Q psy1991         231 SSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTG  310 (366)
Q Consensus       231 P~iC~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F~skssLk~H~rtH~~  310 (366)
                      |+.|++||+.|.....|..|... |..                       .+.+.|..  |++.|.+...|..|+++|++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-----------------------~~~~~C~~--C~~~f~~~~~l~~H~~~h~~   54 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLI-HSD-----------------------TRPYPCQY--CGKRFHQKSDMKKHTFIHTG   54 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHH-HHT-----------------------CCCEECSS--SCCEESSHHHHHHHHHHHHT
T ss_pred             CccCCCCcccccCchhHHHHHHH-cCC-----------------------CCCeeCCc--CChhhCCHHHHHHHHHHhcC
Confidence            57899999999999999866443 321                       12356777  99999999999999999999


Q ss_pred             CCceecCCCCCCCcccChHHHHHHhhhhcC
Q psy1991         311 EKPYQCGWKGCGWKFARSDELTRHFRKHTG  340 (366)
Q Consensus       311 eKpf~C~i~~CgKsF~sk~~L~~H~rtHtg  340 (366)
                      +++|.|.+  |++.|.++..|.+|+++|+|
T Consensus        55 ~~~~~C~~--C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           55 EKPHKCQV--CGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             CCCEECTT--TSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCcCCC--cchhhCChHHHHHHHHhhCC
Confidence            99999955  99999999999999999975

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.46  E-value=6.8e-14  Score=107.81  Aligned_cols=87  Identities=34%  Similarity=0.592  Sum_probs=71.3

Q ss_pred             CCCcccc--cccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceeeeecCCCCCcccCchhHHHHHH
Q psy1991         229 VNSSSHG--NYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLR  306 (366)
Q Consensus       229 ~~P~iC~--~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F~skssLk~H~r  306 (366)
                      ..|+.|+  .||+.|.....|..|.. .|..                       .+.+.|..  |++.|.+...|..|++
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~-~h~~-----------------------~~~~~C~~--C~~~f~~~~~l~~H~~   55 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIR-IHTG-----------------------QKPFQCRI--CMRNFSRSDHLTTHIR   55 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHH-HHHC-----------------------CCCEECTT--TCCEESCHHHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHH-HhCC-----------------------CCCccCCC--CCcccCCHHHHHHHHH
Confidence            3578998  69999999999986643 3322                       12456777  9999999999999999


Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCC
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP  343 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKp  343 (366)
                      +|+++++|.|.+  |++.|.++..|.+|+++|+++++
T Consensus        56 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           56 THTGEKPFACDI--CGRKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             HHHCCCCEECTT--TCCEESSHHHHHHHHGGGGC---
T ss_pred             HcCCCCCccCCC--CCchhCCHHHHHHHHHHhcccCC
Confidence            999999999955  99999999999999999998763

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=8.1e-14  Score=112.33  Aligned_cols=72  Identities=17%  Similarity=0.311  Sum_probs=66.4

Q ss_pred             CCcccCchhHHHHHHhhcCCCceecCCCCCCCcc-cChHHHHHHhhhhcCCCCeecCccccccCChhHHHHH-hhcC
Q psy1991         292 GKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKF-ARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLH-MKRH  366 (366)
Q Consensus       292 gK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF-~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H-~KtH  366 (366)
                      ...|.....|..|++.|.++++|.|  +.|++.| ..+..|..|+++| ++++|.|.+|||.|.+++.|++| +++|
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C--~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H   86 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSC--PTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANH   86 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEEC--TTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCC--CCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhc
Confidence            4567888899999999999999999  4599999 9999999999999 99999999999999999999999 8877

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.45  E-value=7.1e-14  Score=112.15  Aligned_cols=89  Identities=16%  Similarity=0.114  Sum_probs=76.1

Q ss_pred             CCCCcccccccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceeeeecCCCCCcccCchhHHHHHHh
Q psy1991         228 RVNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRT  307 (366)
Q Consensus       228 r~~P~iC~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F~skssLk~H~rt  307 (366)
                      +..++.|++|++.|.....|..|... |.                         +.+.|..  |++.|.+...|..|++ 
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~~H~~~-H~-------------------------~~~~C~~--C~~~f~~~~~l~~H~~-   63 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQGSHERL-CR-------------------------NAAVCPY--CSLRFFSPELKQEHES-   63 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHHHHHHH-HH-------------------------HSBCCTT--TCCCBSSHHHHHHHHH-
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHH-CC-------------------------CCccCCC--CCCccCCHHHHHHHHH-
Confidence            34579999999999999999866433 31                         1355776  9999999999999996 


Q ss_pred             hcCCCceecCCCCCCCcccChHHHHHHhh-hhcCCCCeecC
Q psy1991         308 HTGEKPYQCGWKGCGWKFARSDELTRHFR-KHTGDRPFQCT  347 (366)
Q Consensus       308 H~~eKpf~C~i~~CgKsF~sk~~L~~H~r-tHtgeKpykC~  347 (366)
                      |.++++|.|.+  |++.|.++..|.+|++ +|.++++|.|.
T Consensus        64 H~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           64 KCEYKKLTCLE--CMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HCSTGGGEEGG--GTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             cCCCCCccCcc--ccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            99999999955  9999999999999997 99999999875

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=3.9e-14  Score=106.33  Aligned_cols=60  Identities=45%  Similarity=0.852  Sum_probs=52.4

Q ss_pred             HHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         305 LRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       305 ~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .++|.++++|.|.+  |++.|.....|.+|+++|.++++|+|++|++.|.++..|.+|+++|
T Consensus         6 ~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H   65 (72)
T 1x6e_A            6 SGIHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH   65 (72)
T ss_dssp             CCTTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CcccCCCCCccCCC--CCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhc
Confidence            45688889999955  9999999999999999999999999999999999999999998876

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=5e-14  Score=105.40  Aligned_cols=67  Identities=49%  Similarity=0.970  Sum_probs=57.8

Q ss_pred             hHHHHHH-hhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         300 HLKAHLR-THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       300 sLk~H~r-tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|..|++ +|.++++|.|+++.|++.|..+..|.+|+++|.++++|.|++||+.|.+++.|.+|+++|
T Consensus         5 ~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G            5 PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             ---CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            4445544 378899999964469999999999999999999999999999999999999999999987

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=2.8e-14  Score=108.25  Aligned_cols=65  Identities=34%  Similarity=0.737  Sum_probs=58.0

Q ss_pred             hHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhh-hhcCC-CCeecCccccccCChhHHHHHhhcC
Q psy1991         300 HLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFR-KHTGD-RPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       300 sLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~r-tHtge-KpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|.+|+++|+++++|.|.+  |++.|..+..|.+|++ .|.++ ++|+|++|++.|.++..|.+|+++|
T Consensus         2 s~~~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~   68 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQ   68 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CCCccccccCCCCCeECCC--cCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHh
Confidence            4567899999999999955  9999999999999997 67765 8999999999999999999999874

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.43  E-value=1.3e-13  Score=103.21  Aligned_cols=58  Identities=36%  Similarity=0.687  Sum_probs=53.1

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      ++.|.|..  ||+.|.+...|..|+++|+++++|.|.  .||+.|.....|.+|+++|+|++
T Consensus         2 EKpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~--~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNF--CGKTYRDASGLSRHRRAHLGYRPRSCP--ECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHHHHHTCCCEECT--TTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCC--CCCEeCCHHHHHHHHHHhCCCcCeECC--CCCCCcCCHHHHHHHhCccCCCC
Confidence            35677877  999999999999999999999999995  59999999999999999999875

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.41  E-value=6.3e-13  Score=104.26  Aligned_cols=86  Identities=29%  Similarity=0.529  Sum_probs=72.4

Q ss_pred             CCCccccc--ccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceeeeecCCCCCcccCchhHHHHHH
Q psy1991         229 VNSSSHGN--YNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLR  306 (366)
Q Consensus       229 ~~P~iC~~--CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F~skssLk~H~r  306 (366)
                      ..++.|+.  |++.|.....|..|.. .|..                       .+.+.|.++.|++.|.+...|..|++
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~-----------------------~~~~~C~~~~C~~~f~~~~~l~~H~~   68 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLR-THTG-----------------------EKPYKCTWEGCDWRFARSDELTRHYR   68 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHH-HHSC-----------------------CCCEECCSSSCCCEESSHHHHHHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHH-HhCC-----------------------CCCeeCCCCCCCCccCCHHHHHHHHH
Confidence            34688996  9999999999986654 3432                       12366865669999999999999999


Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhhhcC
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG  340 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtg  340 (366)
                      +|+++++|.|.+  |++.|.....|..|+++|++
T Consensus        69 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           69 KHTGAKPFQCGV--CNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             HHTSCCSCBCSS--SCCBCSSHHHHHHHHHHHCC
T ss_pred             HhCCCCCeECCC--CcCccCCHHHHHHHHHHhCC
Confidence            999999999955  99999999999999999974

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=8.5e-14  Score=106.38  Aligned_cols=68  Identities=24%  Similarity=0.476  Sum_probs=59.0

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCC----CceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcccccc
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGE----KPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAF  353 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~e----Kpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsF  353 (366)
                      +.+.|..  |++.|.+...|..|+++|+.+    ++|.|.+  |++.|..+..|.+|+++|++++++.|..|+..|
T Consensus        14 k~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           14 KPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             CCEECSS--SSCEESSHHHHHHHHHHTTCSSCCCCCEECSS--SCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             CCCcCCC--CCCccCCHHHHHHHHHHhcCCcCCCcceECCC--CCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            4455766  999999999999999887665    7899955  999999999999999999999999999999876

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.40  E-value=5.4e-13  Score=102.49  Aligned_cols=85  Identities=28%  Similarity=0.534  Sum_probs=71.6

Q ss_pred             CCCccccc--ccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceeeeecCCCCCcccCchhHHHHHH
Q psy1991         229 VNSSSHGN--YNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLR  306 (366)
Q Consensus       229 ~~P~iC~~--CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F~skssLk~H~r  306 (366)
                      ..++.|+.  ||+.|.....|..|.. .|..                       .+.+.|.+++|++.|.+...|..|++
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~-----------------------~~~~~C~~~~C~~~f~~~~~l~~H~~   58 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLR-THTG-----------------------EKPYHCDWDGCGWKFARSDELTRHYR   58 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHT-TSCS-----------------------SCCEECCSTTTCCEESSHHHHHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHH-hcCC-----------------------CCCcCCCCCCCCCccCCHHHHHHHHH
Confidence            45688999  9999999999986643 3321                       13466875669999999999999999


Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhhhc
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHt  339 (366)
                      +|+++++|.|.+  |++.|.....|..|+++|.
T Consensus        59 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           59 KHTGHRPFQCQK--CDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             HHHCCCCEECSS--SSCEESSHHHHHHHGGGGC
T ss_pred             HcCCCCCccCCC--CCcccCCHHHHHHHHHhhC
Confidence            999999999955  9999999999999999984

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.39  E-value=7.9e-13  Score=102.97  Aligned_cols=87  Identities=26%  Similarity=0.533  Sum_probs=72.4

Q ss_pred             CCCCcccccccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceeeeecCCCCCcccCchhHHHHHHh
Q psy1991         228 RVNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRT  307 (366)
Q Consensus       228 r~~P~iC~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F~skssLk~H~rt  307 (366)
                      +..++.|++|++.|.....|..|.. .|..                       .+.+.|..  |++.|.+...|..|+++
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-----------------------~~~~~C~~--C~~~f~~~~~l~~H~~~   57 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKL-SHSG-----------------------EKPYSCPV--CGLRFKRKDRMSYHVRS   57 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHH-HSCS-----------------------SCSEECSS--SCCEESCHHHHHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHH-hcCC-----------------------CCCCcCCC--CCCccCCHHHHHHHHHH
Confidence            4567999999999999999986654 3432                       12356777  99999999999999999


Q ss_pred             hcCC--CceecCCCCCCCcccChHHHHHHhh-hhcCCC
Q psy1991         308 HTGE--KPYQCGWKGCGWKFARSDELTRHFR-KHTGDR  342 (366)
Q Consensus       308 H~~e--Kpf~C~i~~CgKsF~sk~~L~~H~r-tHtgeK  342 (366)
                      |+++  ++|.|.+  |++.|.++..|..|++ +|.++.
T Consensus        58 h~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           58 HDGSVGKPYICQS--CGKGFSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             HCCCCCSSBCCSS--SCCCBSSHHHHHHHHHHTSCCCS
T ss_pred             hcCCCCCceECCC--ccchhCCHHHHHHHHHHhcCCCC
Confidence            9987  9999955  9999999999999986 787653

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.38  E-value=2.4e-13  Score=112.37  Aligned_cols=69  Identities=23%  Similarity=0.428  Sum_probs=61.9

Q ss_pred             CcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         293 KTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       293 K~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +.|.....|..|+ .|+++++|.|.+  |++.|.....|.+|+++|  ++||.|++||+.|.+++.|.+|+++|
T Consensus        55 ~~~~~~~~l~~h~-~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h  123 (129)
T 2wbt_A           55 QLLDESSYLYRLL-ASKAISQFVCPL--CLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKK  123 (129)
T ss_dssp             GGTTTHHHHHHHH-HHHHHCSEECTT--TCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHT
T ss_pred             cccCCHHHHHHHH-HhCCCCCeECCC--CCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHH
Confidence            3445677778787 688999999955  999999999999999999  89999999999999999999999986

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=2.9e-13  Score=100.78  Aligned_cols=56  Identities=32%  Similarity=0.645  Sum_probs=31.3

Q ss_pred             hcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhc
Q psy1991         308 HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKR  365 (366)
Q Consensus       308 H~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~Kt  365 (366)
                      |.++++|.|.+  |++.|.....|.+|+++|+++++|+|++|++.|.+...|.+|+++
T Consensus         4 ~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~   59 (70)
T 1x5w_A            4 GSSGHPEKCSE--CSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK   59 (70)
T ss_dssp             CCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHH
Confidence            44555555533  555555555555555555555555555555555555555555554

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.37  E-value=2.8e-13  Score=96.39  Aligned_cols=55  Identities=36%  Similarity=0.845  Sum_probs=45.1

Q ss_pred             CCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         310 GEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       310 ~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ++++|.|.+  |++.|.+...|..|+++|+++++|.|++|++.|.+...|.+|+++|
T Consensus         1 g~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   55 (57)
T 3uk3_C            1 GSSSRECSY--CGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH   55 (57)
T ss_dssp             ----CBCTT--TCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCCCccCCC--CcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHh
Confidence            467889954  9999999999999999999999999999999999999999998865

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=2e-13  Score=100.12  Aligned_cols=60  Identities=27%  Similarity=0.647  Sum_probs=53.4

Q ss_pred             HHhhcCCCceecCCCCCCCcccChHHHHHHhhh-h-cCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         305 LRTHTGEKPYQCGWKGCGWKFARSDELTRHFRK-H-TGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       305 ~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rt-H-tgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +++|.++++|.|.+  |++.|.+...|.+|+++ | .++++|+|+.||+.|.+++.|.+|+++|
T Consensus         2 ~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~   63 (66)
T 2drp_A            2 EFTKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII   63 (66)
T ss_dssp             -CEEEETTEEECTT--TCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             ccccCCCcceECCC--CcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHH
Confidence            35688999999954  99999999999999998 7 5899999999999999999999999864

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=7.1e-13  Score=100.44  Aligned_cols=62  Identities=45%  Similarity=0.811  Sum_probs=56.4

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeec
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC  346 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC  346 (366)
                      .+.+.|..  |++.|.+...|..|+++|.++++|.|.+  |++.|.....|.+|+++|++++||+|
T Consensus        16 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           16 RRRYKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCDE--CGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SCSSBCSS--SCCBCSCHHHHHHHHTTTCCSCSEECSS--SCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCEECCC--CCcccCCHHHHHHHHHHcCCCcCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            45667777  9999999999999999999999999955  99999999999999999999999988

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.35  E-value=5.6e-13  Score=100.28  Aligned_cols=59  Identities=37%  Similarity=0.849  Sum_probs=37.4

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCe
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF  344 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpy  344 (366)
                      +.+.|..  |++.|.+...|..|+++|.++++|.|.+  |++.|.++..|.+|+++|++++||
T Consensus        16 ~~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           16 KPYKCDR--CQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CSBCCTT--SSCCBSCHHHHHHHHHHHCCCCSEECTT--TCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCeECCC--CCceeCCHHHHHHHHHHcCCCCCEECCC--CCchhCCHHHHHHHHHhcCCCCCC
Confidence            3444554  6666666666666666666666666633  666666666666666666666654

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=5.6e-13  Score=107.78  Aligned_cols=95  Identities=14%  Similarity=0.117  Sum_probs=74.1

Q ss_pred             CCCCcccccccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceeeeecCCCCCcc--cCchhHHHHH
Q psy1991         228 RVNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTY--TKSSHLKAHL  305 (366)
Q Consensus       228 r~~P~iC~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F--~skssLk~H~  305 (366)
                      +..|+.|++||+.|.....|..|... +.-.    .+                .....|..  |++.|  .+...|..|+
T Consensus        16 ~~~~~~C~~C~k~f~~~~~L~~H~~~-~~h~----~~----------------~~~~~C~~--C~~~f~f~~~~~l~~H~   72 (115)
T 2dmi_A           16 GASKFRCKDCSAAYDTLVELTVHMNE-TGHY----RD----------------DNHETDNN--NPKRWSKPRKRSLLEME   72 (115)
T ss_dssp             CCCSEEBSSSSCEESSHHHHHHHHHH-TCCC----BC----------------SCCCCCCC--CCSCCSSCCCCCCCCCC
T ss_pred             CCCCEECCccCchhcCHHHHHHHHHH-hCcc----cc----------------CCCccCCC--CCcccccccHHHHHHHh
Confidence            35679999999999999999977543 1100    00                00112656  99998  8999999999


Q ss_pred             HhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecC
Q psy1991         306 RTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT  347 (366)
Q Consensus       306 rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~  347 (366)
                      ++|+++++|.|.+  |++.|.++..|.+|+++|+......++
T Consensus        73 ~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           73 GKEDAQKVLKCMY--CGHSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             CSCCCCSSCBCSS--SCCBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             hccCCCcceECCC--CCCccCCHHHHHHHHHHhCCcccCCCC
Confidence            9999999999955  999999999999999998877665544

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=1.7e-12  Score=104.19  Aligned_cols=85  Identities=27%  Similarity=0.496  Sum_probs=71.7

Q ss_pred             CCCCCcccccccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceeeeecCCCCCcccCchhHHHHHH
Q psy1991         227 YRVNSSSHGNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLR  306 (366)
Q Consensus       227 ~r~~P~iC~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F~skssLk~H~r  306 (366)
                      .+..++.| .|++.|.....|..|.. .|..                       .+.+.|..  |++.|.+...|..|++
T Consensus         6 ~~~k~~~C-~C~~~f~~~~~l~~H~~-~h~~-----------------------~~~~~C~~--C~~~f~~~~~l~~H~~   58 (110)
T 2csh_A            6 SGDKLYPC-QCGKSFTHKSQRDRHMS-MHLG-----------------------LRPYGCGV--CGKKFKMKHHLVGHMK   58 (110)
T ss_dssp             CCCCCEEC-TTSCEESSHHHHHHHHH-HHSC-----------------------CCSEECTT--TSCEESSSHHHHHHHT
T ss_pred             CCCCCEec-cCCCccCCHHHHHHHHH-HcCC-----------------------CcCccCCC--CCcccCCHHHHHHHHH
Confidence            34567999 99999999999986654 3321                       13366777  9999999999999999


Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhhhcC
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG  340 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtg  340 (366)
                      +|+++++|.|.+  |++.|.++..|.+|+++|++
T Consensus        59 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           59 IHTGIKPYECNI--CAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             TTCCCCCEECSS--SCCEESCHHHHHHHHHHHHH
T ss_pred             HcCCCCCeeCCC--CcchhcCHHHHHHHHHHccc
Confidence            999999999955  99999999999999998864

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.32  E-value=1.3e-12  Score=104.25  Aligned_cols=54  Identities=28%  Similarity=0.514  Sum_probs=34.9

Q ss_pred             hcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHh
Q psy1991         308 HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHM  363 (366)
Q Consensus       308 H~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~  363 (366)
                      +.+.++|.|++  |++.|.++..|.+|+++|++++||+|++|++.|.++..|.+|+
T Consensus        23 ~~~~~~h~C~~--Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   76 (85)
T 2lv2_A           23 SASAECHLCPV--CGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHI   76 (85)
T ss_dssp             CCCCTTEECTT--SCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHH
T ss_pred             CCCCCCEECCC--CCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhC
Confidence            44555666633  6666666666666666666666666666666666666666665

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=1.5e-12  Score=98.60  Aligned_cols=58  Identities=36%  Similarity=0.833  Sum_probs=54.8

Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .+.++++|.|.+  |++.|.....|.+|+++|+++++|+|++|++.|.+...|.+|+++|
T Consensus        12 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H   69 (77)
T 2cot_A           12 QQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH   69 (77)
T ss_dssp             CCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGS
T ss_pred             cCCCCCCEECCC--CCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHh
Confidence            467889999955  9999999999999999999999999999999999999999999987

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=1e-12  Score=99.62  Aligned_cols=55  Identities=29%  Similarity=0.671  Sum_probs=38.9

Q ss_pred             hcCCCceecCCCCCCCcccChHHHHHHhhhhcC---CCCeecCccccccCChhHHHHHhh
Q psy1991         308 HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG---DRPFQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       308 H~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtg---eKpykC~~CgKsFs~kssLk~H~K  364 (366)
                      |+++++|.|.+  |++.|..+..|.+|+++|++   +++|+|++|++.|.++..|.+|++
T Consensus         2 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~   59 (78)
T 2d9h_A            2 SSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRS   59 (78)
T ss_dssp             CCSCCCEECSS--SCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCcCeECCC--CCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHH
Confidence            56677777744  77777777777777777764   667777777777777777777764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.30  E-value=2.3e-12  Score=91.65  Aligned_cols=46  Identities=37%  Similarity=0.821  Sum_probs=23.5

Q ss_pred             CCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         321 CGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       321 CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |++.|.....|..|+++|+++++|.|+.|++.|.+.+.|.+|+++|
T Consensus         7 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   52 (57)
T 1bbo_A            7 CGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK   52 (57)
T ss_dssp             TCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHh
Confidence            5555555555555555555555555555555555555555554443

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=3.4e-12  Score=97.38  Aligned_cols=65  Identities=32%  Similarity=0.677  Sum_probs=59.7

Q ss_pred             hHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCC----CCeecCccccccCChhHHHHHhhcC
Q psy1991         300 HLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGD----RPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       300 sLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtge----KpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|.+|+++|+++++|.|.+  |++.|.....|.+|++.|+++    ++|+|++|++.|.++..|.+|+++|
T Consensus         2 s~~~H~~~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h   70 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNC   70 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHC
T ss_pred             CcccccceecCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHc
Confidence            4678999999999999955  999999999999999887765    7899999999999999999999987

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.29  E-value=2.9e-12  Score=96.28  Aligned_cols=58  Identities=33%  Similarity=0.791  Sum_probs=54.6

Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .+.++++|.|.+  |++.|..+..|.+|+++|+++++|+|++|++.|.++..|.+|+++|
T Consensus        11 ~~~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   68 (74)
T 2lce_A           11 MTHSDKPYKCDR--CQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH   68 (74)
T ss_dssp             CCCCCCSBCCTT--SSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHH
T ss_pred             ccCCCCCeECCC--CCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhc
Confidence            467889999955  9999999999999999999999999999999999999999999986

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=4.4e-12  Score=91.24  Aligned_cols=50  Identities=44%  Similarity=0.980  Sum_probs=32.4

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHh
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHM  363 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~  363 (366)
                      ++|.|.+  |++.|.....|.+|+++|+++++|.|++|++.|.+++.|.+|+
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred             CcCcCCC--CccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            3566633  6666666666666666666666666666666666666666664

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.25  E-value=6.5e-12  Score=93.69  Aligned_cols=59  Identities=42%  Similarity=0.863  Sum_probs=50.9

Q ss_pred             hcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc--cccccCChhHHHHHhhcC
Q psy1991         308 HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL--CERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       308 H~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~--CgKsFs~kssLk~H~KtH  366 (366)
                      +...++|.|.++.|++.|.....|.+|+++|+++++|+|.+  |++.|.++..|.+|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            45678899954459999999999999999999999999965  999999999999999887

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.25  E-value=7.8e-12  Score=94.72  Aligned_cols=80  Identities=24%  Similarity=0.384  Sum_probs=67.3

Q ss_pred             Cccc--ccccccccchhHhHhhhhccccCCCCccccCCCCCccccchhhhcccceeeeecCCCCCcccCchhHHHHHHhh
Q psy1991         231 SSSH--GNYNKLHIHPYYQTHHHTQIFQTPSITIKSSLLSKPKRRQNWSRRKIIMHTCSHNGCGKTYTKSSHLKAHLRTH  308 (366)
Q Consensus       231 P~iC--~~CGK~F~~~~~L~hHh~~iH~~p~~~~kC~~Csk~f~~k~~l~~H~k~H~C~~~~CgK~F~skssLk~H~rtH  308 (366)
                      |+.|  +.||+.|.....|..|. +.|..                       .+.+.|..++|++.|.+...|..|+++|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~-~~h~~-----------------------~~~~~C~~~~C~~~f~~~~~l~~H~~~h   56 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQ-FSHTQ-----------------------QLPYECPHEGCDKRFSLPSRLKRHEKVH   56 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHH-HHHHT-----------------------TCCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHH-HHhCC-----------------------CCCeeCCCCCCcCccCCHHHHHHHHHHh
Confidence            5789  99999999999998664 44431                       1235676667999999999999999999


Q ss_pred             cCCCceecCCCC---CCCcccChHHHHHHhhhhc
Q psy1991         309 TGEKPYQCGWKG---CGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       309 ~~eKpf~C~i~~---CgKsF~sk~~L~~H~rtHt  339 (366)
                      ++   |.|  ..   |++.|.....|.+|+++|+
T Consensus        57 ~~---~~C--~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           57 AG---YPC--KKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             HS---EEC--CSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             CC---CCC--CCCCCCCCccCCHHHHHHHHHhcC
Confidence            88   999  77   9999999999999999874

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=6.8e-12  Score=103.21  Aligned_cols=68  Identities=24%  Similarity=0.439  Sum_probs=59.8

Q ss_pred             ccceeeeecCCCCCcccCchhHHHHHHh-h---cCCCceecCCCCCCCcccChHHHHHH-hhhhcCCCCeecCcccc
Q psy1991         280 KIIMHTCSHNGCGKTYTKSSHLKAHLRT-H---TGEKPYQCGWKGCGWKFARSDELTRH-FRKHTGDRPFQCTLCER  351 (366)
Q Consensus       280 H~k~H~C~~~~CgK~F~skssLk~H~rt-H---~~eKpf~C~i~~CgKsF~sk~~L~~H-~rtHtgeKpykC~~CgK  351 (366)
                      ..+.+.|..  ||+.|.++..|..|+++ |   .++++|.|.  .||+.|..+..|.+| +++|+|++||+|.++.+
T Consensus        15 gekpy~C~~--Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~--~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           15 VEGGYECKY--CTFQTPDLNMFTFHVDSEHPNVVLNSSYVCV--ECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCSSEECSS--CSCEESCHHHHHHHHHHHCSSCCCSCCEEET--TTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCcCcCCCC--CCCccCCHHHHHHHHHhhCCCCCCCCCcCCC--CCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            445677877  99999999999999984 8   568999995  599999999999999 89999999999998653

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=1.9e-11  Score=92.12  Aligned_cols=58  Identities=33%  Similarity=0.740  Sum_probs=54.4

Q ss_pred             cCCCceecCCCCCCCcccChHHHHHHhh-hhcCCCCeecCc--cccccCChhHHHHHhhcC
Q psy1991         309 TGEKPYQCGWKGCGWKFARSDELTRHFR-KHTGDRPFQCTL--CERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       309 ~~eKpf~C~i~~CgKsF~sk~~L~~H~r-tHtgeKpykC~~--CgKsFs~kssLk~H~KtH  366 (366)
                      +++++|.|.++.|++.|.++..|.+|++ .|.++++|+|++  |++.|.++..|.+|+++|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H   63 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH   63 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHh
Confidence            5788999976779999999999999999 799999999999  999999999999999876

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=2.6e-11  Score=90.10  Aligned_cols=60  Identities=25%  Similarity=0.635  Sum_probs=54.8

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCe
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF  344 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpy  344 (366)
                      .+.+.|..  |++.|.+...|..|+++|+++++|.|.+  |++.|..+..|.+|+++|++++|.
T Consensus         7 ~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            7 GHPEKCSE--CSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCSEECSS--SSCEESSHHHHHHHHGGGCCSCSEECSS--SSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCeECCC--CCcccCCHHHHHHHHHHcCCCCCEeCCC--CCCccCCHHHHHHHHHHHhCCCCC
Confidence            35567777  9999999999999999999999999955  999999999999999999998874

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.16  E-value=1.8e-11  Score=94.93  Aligned_cols=54  Identities=48%  Similarity=0.952  Sum_probs=51.0

Q ss_pred             CCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       311 eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +++|.|.+  |++.|.....|..|+++|+++++|.|+.|++.|.+...|.+|+++|
T Consensus         1 ek~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h   54 (88)
T 1llm_C            1 MKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ   54 (88)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCCcCCC--CCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHh
Confidence            57899955  9999999999999999999999999999999999999999999865

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.14  E-value=3.1e-11  Score=94.02  Aligned_cols=59  Identities=25%  Similarity=0.473  Sum_probs=54.3

Q ss_pred             eeecCCCCCcccCchhHHHHHHh-hcCCCc--------eecCCCCCCCcccChHHHHHHhhhhcCCCCeecC
Q psy1991         285 TCSHNGCGKTYTKSSHLKAHLRT-HTGEKP--------YQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT  347 (366)
Q Consensus       285 ~C~~~~CgK~F~skssLk~H~rt-H~~eKp--------f~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~  347 (366)
                      .|..  |++.|.+...|.+|+++ |.++++        |.|.+  |++.|..+..|.+|+++|++++||+|+
T Consensus        27 ~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           27 PKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SCCC--CCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSS--TTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             cccc--cccccCCHHHHHHHHHHhccCCCCCCccceeccCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3555  99999999999999998 988887        99955  999999999999999999999999996

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=2.4e-11  Score=89.82  Aligned_cols=54  Identities=22%  Similarity=0.495  Sum_probs=42.4

Q ss_pred             cCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecC-ccccccCChhHHHHHhhcC
Q psy1991         309 TGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT-LCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       309 ~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~-~CgKsFs~kssLk~H~KtH  366 (366)
                      .++++|.|..  |++.|. ...|..|+++ ++++||+|+ .||+.|..++.|.+|+++|
T Consensus         6 C~~~~~~C~~--C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A            6 SGKRTQPCTY--CTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             CCCCEEECSS--SCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTT
T ss_pred             CCCCCeeccc--cCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhh
Confidence            4567788844  888888 8888888877 778888888 8888888888888888776

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.13  E-value=5.4e-11  Score=84.38  Aligned_cols=55  Identities=36%  Similarity=0.841  Sum_probs=50.6

Q ss_pred             eeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       284 H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      +.|..  |++.|.+...|..|+++|+++++|.|.+  |++.|.+...|.+|+++|++++
T Consensus         2 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            2 YICEE--CGIRXKKPSMLKKHIRTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CBCTT--TCCBCSSHHHHHHHHHHTSSCCCEECSS--SSCEESSHHHHHHHHHSSSSCC
T ss_pred             CcCCC--CcCcCCCHHHHHHHHHhcCCCCCccCCC--CCchhcCHHHHHHHHHHhcccC
Confidence            45666  9999999999999999999999999955  9999999999999999999876

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.11  E-value=6.3e-11  Score=94.33  Aligned_cols=59  Identities=27%  Similarity=0.598  Sum_probs=52.6

Q ss_pred             ccceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHh-hhhcCCC
Q psy1991         280 KIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHF-RKHTGDR  342 (366)
Q Consensus       280 H~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~-rtHtgeK  342 (366)
                      ..+.|.|..  ||+.|.++..|.+|+++|+++++|.|.+  |++.|.++..|.+|+ +.|.+|.
T Consensus        25 ~~~~h~C~~--Cgk~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           25 SAECHLCPV--CGESFASKGAQERHLRLLHAAQVFPCKY--CPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCTTEECTT--SCCEESSHHHHHHHHHTTSCSSSEECTT--SSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCEECCC--CCCCcCcHHHHhhhhhhccCCCccCCCC--CCCEeCCHHHHHHhCcccCcCCC
Confidence            445677877  9999999999999999999999999955  999999999999997 5688774

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.10  E-value=9e-11  Score=87.78  Aligned_cols=58  Identities=43%  Similarity=0.740  Sum_probs=52.9

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      .+.+.|..  |++.|.+...|..|+++|.++++|.|.+  |++.|..+..|.+|+++|+++.
T Consensus        12 ~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           12 EKPYGCVE--CGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCEECSS--SCCEESSHHHHHHHHHGGGCSCCEECSS--SCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCccCCC--CCCccCCHHHHHHHHHhcCCCCCeECCC--CCcccCCHHHHHHHHHhcCCCC
Confidence            45677777  9999999999999999999999999955  9999999999999999998764

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.09  E-value=1.1e-10  Score=86.88  Aligned_cols=60  Identities=72%  Similarity=1.270  Sum_probs=53.8

Q ss_pred             cccceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhh
Q psy1991         279 RKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKH  338 (366)
Q Consensus       279 ~H~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtH  338 (366)
                      ...+.+.|..++|++.|.+...|..|+++|+++++|.|.++.|++.|..+..|.+|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            345677898888999999999999999999999999995446999999999999999876

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.09  E-value=8.5e-11  Score=83.36  Aligned_cols=55  Identities=42%  Similarity=0.836  Sum_probs=48.8

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcC
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG  340 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtg  340 (366)
                      +.+.|..  |++.|.+...|..|+++|+++++|.|.+  |++.|..+..|.+|+++|++
T Consensus         3 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            3 SSRECSY--CGKFFRSNYYLNIHLRTHTGEKPYKCEF--CEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             --CBCTT--TCCBCSCHHHHHHHHHHHHCCCCEECSS--SSCEESSHHHHHHHHHHHC-
T ss_pred             CCccCCC--CcchhCChHHHHHHHHHcCCCCCcCCCC--CcchhCCHHHHHHHHHHhcC
Confidence            4566777  9999999999999999999999999955  99999999999999999864

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.09  E-value=6.6e-11  Score=97.26  Aligned_cols=57  Identities=28%  Similarity=0.483  Sum_probs=51.8

Q ss_pred             hcCCCceecCCCCCCCcccChHHHHHHhh-hh---cCCCCeecCccccccCChhHHHHH-hhcC
Q psy1991         308 HTGEKPYQCGWKGCGWKFARSDELTRHFR-KH---TGDRPFQCTLCERAFSRSDHLSLH-MKRH  366 (366)
Q Consensus       308 H~~eKpf~C~i~~CgKsF~sk~~L~~H~r-tH---tgeKpykC~~CgKsFs~kssLk~H-~KtH  366 (366)
                      -.|+++|.|.  .|++.|..+..|.+|++ +|   .+++||+|++||+.|.+++.|.+| +++|
T Consensus        13 ~~gekpy~C~--~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~H   74 (102)
T 2ghf_A           13 KKVEGGYECK--YCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYH   74 (102)
T ss_dssp             CCCCSSEECS--SCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTS
T ss_pred             CCCCcCcCCC--CCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhc
Confidence            3578999995  59999999999999998 59   668999999999999999999999 7877

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.07  E-value=1.2e-10  Score=86.83  Aligned_cols=58  Identities=43%  Similarity=0.870  Sum_probs=52.3

Q ss_pred             ccceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhc
Q psy1991         280 KIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       280 H~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHt  339 (366)
                      ..+.+.|.++.|++.|.+...|..|+++|.++++|.|.+  |++.|.+...|.+|+++|+
T Consensus        16 ~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           16 KMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHTTCC
T ss_pred             CCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCC--CCchhCCHHHHHHHHHhcC
Confidence            445677876679999999999999999999999999955  9999999999999999884

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.3e-11  Score=82.47  Aligned_cols=45  Identities=36%  Similarity=0.648  Sum_probs=42.1

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCC--cCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            4788899999999955  99999999999999999999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.2e-11  Score=81.92  Aligned_cols=45  Identities=33%  Similarity=0.544  Sum_probs=42.1

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSS--SCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCC--CChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788999999999955  99999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.8e-11  Score=81.77  Aligned_cols=45  Identities=31%  Similarity=0.542  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSS--SCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3778899999999955  99999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.9e-11  Score=81.42  Aligned_cols=45  Identities=36%  Similarity=0.597  Sum_probs=42.1

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCC--CChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4788899999999955  99999999999999999999999999988

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.05  E-value=4.8e-11  Score=81.44  Aligned_cols=45  Identities=33%  Similarity=0.518  Sum_probs=42.1

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4788899999999955  99999999999999999999999999988

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=4.8e-11  Score=80.88  Aligned_cols=44  Identities=25%  Similarity=0.456  Sum_probs=41.2

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      |+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSS--SSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            577899999999955  99999999999999999999999999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.05  E-value=5.4e-11  Score=81.35  Aligned_cols=45  Identities=36%  Similarity=0.643  Sum_probs=42.1

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSS--SCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCC--CcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4788899999999955  99999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5e-11  Score=81.55  Aligned_cols=45  Identities=36%  Similarity=0.636  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTT--TCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCC--CCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            4778899999999955  99999999999999999999999999988

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.9e-11  Score=81.92  Aligned_cols=45  Identities=36%  Similarity=0.550  Sum_probs=42.1

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSS--SCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCc--cChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4788899999999955  99999999999999999999999999988

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.05  E-value=3.5e-11  Score=82.52  Aligned_cols=45  Identities=38%  Similarity=0.675  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSS--SCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788899999999955  99999999999999999999999999988

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=5.1e-11  Score=81.50  Aligned_cols=45  Identities=40%  Similarity=0.668  Sum_probs=42.1

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSS--SCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCC--CCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            4788899999999955  99999999999999999999999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=5.7e-11  Score=81.25  Aligned_cols=44  Identities=36%  Similarity=0.585  Sum_probs=41.5

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      |+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSS--SCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCC--ccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            778899999999955  99999999999999999999999999988

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=7e-11  Score=80.61  Aligned_cols=45  Identities=42%  Similarity=0.735  Sum_probs=42.2

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSS--SCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCC--CChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4788999999999955  99999999999999999999999999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.5e-11  Score=82.31  Aligned_cols=45  Identities=33%  Similarity=0.626  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTT--TCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCC--CCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4788899999999955  99999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.5e-11  Score=81.34  Aligned_cols=45  Identities=40%  Similarity=0.651  Sum_probs=41.9

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTT--TCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3778899999999955  99999999999999999999999999988

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.6e-11  Score=82.08  Aligned_cols=45  Identities=36%  Similarity=0.533  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTT--TCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4778899999999955  99999999999999999999999999988

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.4e-11  Score=81.00  Aligned_cols=45  Identities=36%  Similarity=0.666  Sum_probs=42.1

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSS--SCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4788899999999955  99999999999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.04  E-value=5.2e-11  Score=81.60  Aligned_cols=45  Identities=36%  Similarity=0.627  Sum_probs=41.9

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSS--SCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCc--cCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3778899999999955  99999999999999999999999999988

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.2e-11  Score=81.43  Aligned_cols=45  Identities=36%  Similarity=0.535  Sum_probs=42.1

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788899999999955  99999999999999999999999999988

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.04  E-value=5.6e-11  Score=81.29  Aligned_cols=45  Identities=24%  Similarity=0.446  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSS--SCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCC--CCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            4788899999999955  99999999999999999999999999988

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=4.1e-11  Score=81.82  Aligned_cols=45  Identities=27%  Similarity=0.366  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.+...|.+|+++|+++++|+|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDE--CGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTT--TCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCC--cCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4778899999999955  99999999999999999999999999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=4e-11  Score=82.20  Aligned_cols=45  Identities=29%  Similarity=0.449  Sum_probs=42.2

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSS--SCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCc--CCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4788899999999955  99999999999999999999999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.4e-11  Score=81.35  Aligned_cols=44  Identities=36%  Similarity=0.560  Sum_probs=41.5

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      |+++|.++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTT--TCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCC--CCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            778899999999955  99999999999999999999999999988

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.04  E-value=6.5e-11  Score=80.78  Aligned_cols=45  Identities=36%  Similarity=0.608  Sum_probs=42.1

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSS--SCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCc--cccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4788899999999955  99999999999999999999999999988

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=9.1e-11  Score=93.50  Aligned_cols=63  Identities=17%  Similarity=0.326  Sum_probs=56.0

Q ss_pred             ceeeeecCCCCCccc-CchhHHHHHHhhcC-CCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         282 IMHTCSHNGCGKTYT-KSSHLKAHLRTHTG-EKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       282 k~H~C~~~~CgK~F~-skssLk~H~rtH~~-eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +.+.|..  |++.|. ++..|..|+++|++ +++|.|.+  |++.|.++..|.+|+++|++++|.....
T Consensus        23 ~~~~C~~--C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~~kp~~~~~   87 (98)
T 2gqj_A           23 GEAVCPT--CNVVTRKTLVGLKKHMEVCQKLQDALKCQH--CRKQFKSKAGLNYHTMAEHSAKPSDAEA   87 (98)
T ss_dssp             SCCCCTT--TCCCCSSCSHHHHHHHHHHHHHHHHHSCSS--SCCCCSCHHHHHHHHHHHSCSCSSCCCC
T ss_pred             CCcCCCC--CCCChhhhHHHHHHHHHHHcCCCCCEECCC--CCCccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            4566766  999999 99999999999998 99999955  9999999999999999999999865443

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.9e-11  Score=81.40  Aligned_cols=45  Identities=38%  Similarity=0.626  Sum_probs=42.1

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETT--TTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCC--cChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4778899999999955  99999999999999999999999999988

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.6e-11  Score=81.26  Aligned_cols=45  Identities=38%  Similarity=0.720  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSS--SCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCc--CCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            4778899999999955  99999999999999999999999999988

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.4e-11  Score=80.99  Aligned_cols=45  Identities=40%  Similarity=0.641  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSE--CGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCC--CCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            4778899999999955  99999999999999999999999999988

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.8e-11  Score=81.22  Aligned_cols=45  Identities=36%  Similarity=0.644  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSS--SCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            4778899999999955  99999999999999999999999999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.2e-11  Score=81.29  Aligned_cols=45  Identities=36%  Similarity=0.573  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTT--TTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCC--CCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            4788899999999955  99999999999999999999999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.5e-11  Score=81.10  Aligned_cols=44  Identities=30%  Similarity=0.449  Sum_probs=41.5

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      |+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|++|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSS--SCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcc--cCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            678899999999955  99999999999999999999999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.2e-11  Score=81.05  Aligned_cols=45  Identities=33%  Similarity=0.591  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSS--SCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCc--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4778899999999955  99999999999999999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.7e-11  Score=81.04  Aligned_cols=44  Identities=34%  Similarity=0.624  Sum_probs=41.5

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      |+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSS--SCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCc--cChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            678899999999955  99999999999999999999999999988

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.03  E-value=2.3e-10  Score=82.10  Aligned_cols=55  Identities=44%  Similarity=0.947  Sum_probs=49.5

Q ss_pred             eeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHh-hhhcCC
Q psy1991         283 MHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHF-RKHTGD  341 (366)
Q Consensus       283 ~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~-rtHtge  341 (366)
                      .+.|..  |++.|.+...|..|+++|+++++|.|.+  |++.|.++..|.+|+ ++|.++
T Consensus         2 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEV--CTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTT--TCCCBSCHHHHHHHHHTTTSSCSEECTT--TCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCC--CccccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHHHHHHcCCc
Confidence            456766  9999999999999999999999999955  999999999999996 688765

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.6e-11  Score=81.27  Aligned_cols=45  Identities=40%  Similarity=0.680  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSS--SCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCc--CCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4778899999999955  99999999999999999999999999988

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.02  E-value=2.8e-10  Score=91.51  Aligned_cols=60  Identities=17%  Similarity=0.321  Sum_probs=52.5

Q ss_pred             ceeeeecCCCCCcc-cCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHH-hhhhcCCCCeec
Q psy1991         282 IMHTCSHNGCGKTY-TKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRH-FRKHTGDRPFQC  346 (366)
Q Consensus       282 k~H~C~~~~CgK~F-~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H-~rtHtgeKpykC  346 (366)
                      +.+.|..  |++.| .++..|..|+++| ++++|.|.+  |++.|..+..|++| +++|+++..|.+
T Consensus        33 ~~~~C~~--C~k~F~~~~~~L~~H~~~h-~~k~~~C~~--Cgk~F~~~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           33 GSVSCPT--CQAVGRKTIEGLKKHMENC-KQEMFTCHH--CGKQLRSLAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             SCEECTT--TCSCEESSHHHHHHHHHHH-CCCCCCCSS--SCCCCSSHHHHHHHHHHHTCCCSSCSC
T ss_pred             CCcCCCC--CCCCcccCHHHHHHHHHHH-CCCCeECCC--CCCeeCCHHHHHHHhHHhcCCCCCCCC
Confidence            3466766  99999 9999999999999 999999955  99999999999999 999987655544

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7e-11  Score=80.61  Aligned_cols=45  Identities=31%  Similarity=0.462  Sum_probs=42.0

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4778899999999955  99999999999999999999999999988

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.2e-11  Score=80.45  Aligned_cols=45  Identities=33%  Similarity=0.666  Sum_probs=42.2

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETT--TTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788999999999955  99999999999999999999999999988

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=8e-11  Score=80.48  Aligned_cols=44  Identities=30%  Similarity=0.563  Sum_probs=41.5

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      |+++|.++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCC--CCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            678899999999955  99999999999999999999999999988

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.9e-11  Score=80.98  Aligned_cols=45  Identities=27%  Similarity=0.574  Sum_probs=42.1

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|.+...|..|+++|+++++|+|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccc--cCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4788899999999955  99999999999999999999999999988

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.4e-11  Score=80.81  Aligned_cols=45  Identities=40%  Similarity=0.724  Sum_probs=42.1

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTT--TCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4788899999999955  99999999999999999999999999988

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=8.8e-11  Score=80.28  Aligned_cols=45  Identities=24%  Similarity=0.242  Sum_probs=41.8

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      .|+++|.++++|.|.+  |++.|..+..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRE--CGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTT--TCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccc--cChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3678899999999955  99999999999999999999999999988

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=2.2e-10  Score=81.64  Aligned_cols=47  Identities=36%  Similarity=0.702  Sum_probs=43.2

Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhh-hhcCCCCeecCccccccCC
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFR-KHTGDRPFQCTLCERAFSR  355 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~r-tHtgeKpykC~~CgKsFs~  355 (366)
                      .|.++++|.|.+  |++.|.....|.+|++ +|.++++|+|++|++.|.+
T Consensus         6 ~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            377899999955  9999999999999997 8999999999999999986

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=6.5e-11  Score=80.96  Aligned_cols=45  Identities=36%  Similarity=0.621  Sum_probs=41.7

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSS--SCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788899999999955  99999999999999999999999999976

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=5.9e-11  Score=81.16  Aligned_cols=45  Identities=38%  Similarity=0.679  Sum_probs=42.1

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTT--TCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4788899999999955  99999999999999999999999999988

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.01  E-value=1e-10  Score=80.08  Aligned_cols=45  Identities=27%  Similarity=0.430  Sum_probs=41.8

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|.++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         2 ~h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3678899999999955  99999999999999999999999999988

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=6.9e-11  Score=80.83  Aligned_cols=44  Identities=36%  Similarity=0.585  Sum_probs=41.5

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      |+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         3 H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETT--TTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCC--CCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            778899999999955  99999999999999999999999999988

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.00  E-value=1.3e-10  Score=95.70  Aligned_cols=54  Identities=26%  Similarity=0.433  Sum_probs=49.3

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCC
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGD  341 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtge  341 (366)
                      +.+.|..  ||+.|.+...|..|+++|  +++|.|.+  |++.|.++..|.+|+++|++.
T Consensus        73 ~~~~C~~--C~k~f~~~~~l~~H~~~H--~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           73 SQFVCPL--CLMPFSSSVSLKQHIRYT--EHTKVCPV--CKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CSEECTT--TCCEESSHHHHHHHHHHT--CCCCBCTT--TCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCeECCC--CCcccCCHhHHHHHHHHC--CCCCCCCC--CCcccCCHHHHHHHHHHHCCc
Confidence            4566777  999999999999999999  89999955  999999999999999999876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7.9e-11  Score=80.52  Aligned_cols=45  Identities=36%  Similarity=0.646  Sum_probs=41.9

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|+++++|+|++|
T Consensus         2 ~h~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETT--TTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCC--CCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            4778899999999955  99999999999999999999999999988

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=7.8e-11  Score=80.87  Aligned_cols=44  Identities=41%  Similarity=0.622  Sum_probs=41.3

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      |+++|.++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTT--TTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            678899999999955  99999999999999999999999999988

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=9.9e-11  Score=80.18  Aligned_cols=44  Identities=34%  Similarity=0.518  Sum_probs=41.3

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      |+++|.++++|.|.+  |++.|..+..|.+|+++|+++++|+|++|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSS--SCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcc--cCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            678899999999955  99999999999999999999999999988

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.2e-10  Score=79.54  Aligned_cols=45  Identities=38%  Similarity=0.679  Sum_probs=41.9

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhh-hhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFR-KHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~r-tHtgeKpykC~~C  349 (366)
                      .|+++|.++++|.|.+  |++.|..+..|.+|++ +|++++||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSS--SCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCc--cCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            3778899999999955  9999999999999999 9999999999988

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.6e-10  Score=79.07  Aligned_cols=45  Identities=33%  Similarity=0.629  Sum_probs=41.5

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSS--SCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCc--CCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3778899999999955  99999999999999999999999999976

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.9e-12  Score=94.68  Aligned_cols=57  Identities=19%  Similarity=0.345  Sum_probs=45.0

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +.+.|..  |++.|.+...|..       +++|.|.+  |++.|.....|.+|+++|+++++|.|++|
T Consensus        17 ~~~~C~~--C~k~f~~~~~l~~-------~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           17 RSQKCSK--CGIIFIRRSTLSR-------RKTPMCEK--CRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SEEECSS--SCCEEECCCCCCC-------SSSCCCHH--HHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CCeeCCc--ccchhCCHHHhCc-------CCCCCCCC--CChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            3344555  8888888888876       67888854  88888888888888888888888888877

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.96  E-value=1.3e-11  Score=91.06  Aligned_cols=57  Identities=16%  Similarity=0.370  Sum_probs=49.9

Q ss_pred             HHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHH
Q psy1991         301 LKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLH  362 (366)
Q Consensus       301 Lk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H  362 (366)
                      |..|+++|+++++|.|.  .|++.|.....|.   ++|+++++|+|++||+.|....++..+
T Consensus         2 L~~h~~~H~~~k~~~C~--~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            2 IETDERDSTNRASFKCP--VCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CCCCSSSCCSSSEEECS--SSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             hhhHHHHcCCCCCccCC--CCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccccc
Confidence            45688899999999995  4999999998886   789999999999999999988776544

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.94  E-value=8.3e-10  Score=80.61  Aligned_cols=56  Identities=30%  Similarity=0.539  Sum_probs=50.1

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHHh-h-cCCCceecCCCCCCCcccChHHHHHHhhhhcC
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLRT-H-TGEKPYQCGWKGCGWKFARSDELTRHFRKHTG  340 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~rt-H-~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtg  340 (366)
                      .+.+.|..  |++.|.+...|..|+++ | .++++|.|.+  |++.|.++..|.+|+++|++
T Consensus         8 ~k~~~C~~--C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            8 EHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TTEEECTT--TCCEESSHHHHHHHHHHHSSSSCCCEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             CcceECCC--CcchhCCHHHHHHHHHHHcCCCCcCeECCC--CCCccCCHHHHHHHHHHHcC
Confidence            45677777  99999999999999998 7 5899999955  99999999999999999876

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.93  E-value=3.1e-10  Score=80.71  Aligned_cols=52  Identities=19%  Similarity=0.233  Sum_probs=48.2

Q ss_pred             CCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCee
Q psy1991         292 GKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQ  345 (366)
Q Consensus       292 gK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpyk  345 (366)
                      +|.|.....|..|+++|+++++|.|.+  |++.|.....|.+|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPI--CYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTT--TCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCC--CCcccCCHHHHHHHHHHhccCCCCC
Confidence            578999999999999999999999955  9999999999999999999999874

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.2e-09  Score=82.57  Aligned_cols=63  Identities=24%  Similarity=0.450  Sum_probs=54.2

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHHhhcC---CCceecCCCCCCCcccChHHHHHHh-hhhcCCCCeecC
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLRTHTG---EKPYQCGWKGCGWKFARSDELTRHF-RKHTGDRPFQCT  347 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~rtH~~---eKpf~C~i~~CgKsF~sk~~L~~H~-rtHtgeKpykC~  347 (366)
                      .+.+.|..  |++.|.+...|..|+++|++   +++|.|.+  |++.|..+..|.+|+ +.|.++++....
T Consensus         5 ~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~   71 (78)
T 2d9h_A            5 SSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPALLLAPQE   71 (78)
T ss_dssp             CCCEECSS--SCCEESSHHHHHHHHHHHHHHTTTCCEECTT--TCCEESSHHHHHHHHHHTSTTTSSCCSS
T ss_pred             CcCeECCC--CCCeeCCHHHHHHHHHHhhccCCCcccCCCC--CCchhCCHHHHHHHHHHhCCCCCCCccc
Confidence            35677877  99999999999999999986   89999955  999999999999999 568777776544

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.91  E-value=4e-10  Score=75.34  Aligned_cols=42  Identities=36%  Similarity=0.677  Sum_probs=38.8

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecC
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT  347 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~  347 (366)
                      |+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|+
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSE--CGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSS--SCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCC--cChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            567899999999955  999999999999999999999999985

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.90  E-value=7.5e-10  Score=76.68  Aligned_cols=43  Identities=26%  Similarity=0.491  Sum_probs=39.6

Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcccc
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCER  351 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgK  351 (366)
                      .|.++++|.|.+  |++.|.+...|.+|+++|+++++|+|++|+|
T Consensus         6 ~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETT--TTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            367889999955  9999999999999999999999999999986

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4e-10  Score=76.94  Aligned_cols=43  Identities=40%  Similarity=0.611  Sum_probs=40.0

Q ss_pred             HHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         305 LRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       305 ~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         4 ~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSS--SCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcc--cCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            46789999999955  99999999999999999999999999988

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=4.3e-10  Score=76.94  Aligned_cols=44  Identities=34%  Similarity=0.610  Sum_probs=40.4

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSS--SCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3778899999999955  9999999999999999999999999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.90  E-value=4e-10  Score=77.08  Aligned_cols=44  Identities=39%  Similarity=0.684  Sum_probs=40.4

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +|+++|.++++|.|.+  |++.|.++..|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.5e-10  Score=76.52  Aligned_cols=44  Identities=34%  Similarity=0.622  Sum_probs=40.4

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTT--SCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccc--cCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.8e-10  Score=76.38  Aligned_cols=44  Identities=41%  Similarity=0.697  Sum_probs=40.5

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSS--SCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCC--CChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            4778899999999955  9999999999999999999999999974

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.89  E-value=2.1e-09  Score=81.09  Aligned_cols=58  Identities=29%  Similarity=0.572  Sum_probs=48.4

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHH-hhcCC-CceecCCCCCCCcccChHHHHHHhhhhcC-CCC
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLR-THTGE-KPYQCGWKGCGWKFARSDELTRHFRKHTG-DRP  343 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~r-tH~~e-Kpf~C~i~~CgKsF~sk~~L~~H~rtHtg-eKp  343 (366)
                      +.+.|..  |++.|.+...|..|++ .|.++ ++|.|.+  |++.|.++..|.+|+++|++ +.|
T Consensus        14 k~~~C~~--C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A           14 KPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CSEECTT--TCCEESCHHHHHHHHHHHSSSSCSSEECSS--SSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CCeECCC--cCchhCCHHHHHHHHHHhcCCCCCccCCCC--CCCccCCHHHHHHHHHHhCCCCCC
Confidence            4456766  9999999999999998 57764 8999955  99999999999999997554 444

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.9e-10  Score=76.49  Aligned_cols=44  Identities=34%  Similarity=0.662  Sum_probs=40.5

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.8e-10  Score=76.72  Aligned_cols=44  Identities=39%  Similarity=0.644  Sum_probs=40.4

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSS--SCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCc--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.7e-10  Score=76.42  Aligned_cols=44  Identities=34%  Similarity=0.600  Sum_probs=40.4

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSS--SCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3778899999999955  9999999999999999999999999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.5e-10  Score=76.55  Aligned_cols=44  Identities=39%  Similarity=0.678  Sum_probs=40.5

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      .|+++|.++++|.|.+  |++.|.++..|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTT--TCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCC--CCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4788899999999955  9999999999999999999999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.3e-10  Score=76.35  Aligned_cols=44  Identities=32%  Similarity=0.591  Sum_probs=40.4

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|++
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSS--SCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCC--CCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            3778899999999955  9999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.6e-10  Score=76.63  Aligned_cols=44  Identities=39%  Similarity=0.679  Sum_probs=40.4

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSS--SCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCC--CCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999974

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=3.3e-11  Score=88.91  Aligned_cols=61  Identities=21%  Similarity=0.443  Sum_probs=49.0

Q ss_pred             CchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         297 KSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       297 skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ++..|..|+++|.++++|.|.+  |++.|.....|..       +++|.|++||+.|.+.+.|.+|+++|
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H   62 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSK--CGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNE   62 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSS--SCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCC
T ss_pred             cchhHHHHHHHhCCCCCeeCCc--ccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhh
Confidence            3456777888888888888844  8888888887766       67888888888888888888888776

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5e-10  Score=76.44  Aligned_cols=44  Identities=41%  Similarity=0.734  Sum_probs=40.4

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCS--SCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=4.8e-10  Score=76.55  Aligned_cols=44  Identities=34%  Similarity=0.592  Sum_probs=40.3

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      .|+++|.++++|.|.+  |++.|.++..|.+|+++|+++++|+|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTT--TCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3778899999999955  9999999999999999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5.3e-10  Score=76.15  Aligned_cols=44  Identities=45%  Similarity=0.783  Sum_probs=40.4

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSS--SCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5.2e-10  Score=76.19  Aligned_cols=44  Identities=39%  Similarity=0.666  Sum_probs=40.5

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSS--SCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCC--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5.9e-10  Score=74.34  Aligned_cols=42  Identities=29%  Similarity=0.479  Sum_probs=38.6

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecC
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT  347 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~  347 (366)
                      |+++|.++++|.|.+  |++.|.++..|.+|+++|+++++|+|.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTT--TCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCC--CCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567899999999955  999999999999999999999999984

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.2e-10  Score=76.13  Aligned_cols=44  Identities=36%  Similarity=0.696  Sum_probs=40.4

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSS--SCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6e-10  Score=76.21  Aligned_cols=44  Identities=36%  Similarity=0.634  Sum_probs=40.3

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSS--SCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3778899999999955  9999999999999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5e-10  Score=76.45  Aligned_cols=44  Identities=39%  Similarity=0.684  Sum_probs=40.3

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +|+++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSS--SCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCC--CCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            3778899999999955  9999999999999999999999999974

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=1.1e-09  Score=74.54  Aligned_cols=42  Identities=36%  Similarity=0.695  Sum_probs=39.4

Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccc
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCE  350 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~Cg  350 (366)
                      +|+++++|.|.  .|++.|..+..|.+|+++|+++++|.|++||
T Consensus         4 ~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCP--VCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEET--TTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCC--CCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            58899999995  4999999999999999999999999999997

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.8e-10  Score=76.44  Aligned_cols=43  Identities=40%  Similarity=0.689  Sum_probs=39.8

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      |+++|.++++|.|.+  |++.|.++..|.+|+++|+++++|+|++
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSS--SCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCC--CCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            678899999999955  9999999999999999999999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.4e-10  Score=76.28  Aligned_cols=44  Identities=39%  Similarity=0.638  Sum_probs=40.4

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|+++++|+|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTT--TTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCc--CChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999974

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.2e-10  Score=76.54  Aligned_cols=43  Identities=40%  Similarity=0.639  Sum_probs=39.9

Q ss_pred             HHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         305 LRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       305 ~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      +++|.++++|.|.+  |++.|.++..|.+|+++|+++++|+|++|
T Consensus         4 ~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSS--SCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46789999999955  99999999999999999999999999988

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7.3e-10  Score=74.62  Aligned_cols=43  Identities=35%  Similarity=0.564  Sum_probs=39.7

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecC
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT  347 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~  347 (366)
                      +|+++|.++++|.|.+  |++.|.+...|.+|+++|+++++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTT--TCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCC--CCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4778899999999955  999999999999999999999999985

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.1e-10  Score=75.02  Aligned_cols=43  Identities=35%  Similarity=0.524  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecC
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT  347 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~  347 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|+++++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTT--TCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCC--CCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4778899999999955  999999999999999999999999985

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6.9e-10  Score=75.90  Aligned_cols=44  Identities=32%  Similarity=0.531  Sum_probs=40.2

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      .|+++|.++++|.|.+  |++.|.++..|.+|+++|+++++|+|++
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTT--TCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3678899999999955  9999999999999999999999999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=4.7e-10  Score=76.75  Aligned_cols=44  Identities=36%  Similarity=0.575  Sum_probs=40.3

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|+++++|+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETT--TTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcc--cChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4788899999999955  9999999999999999999999999973

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=8.1e-10  Score=75.74  Aligned_cols=46  Identities=50%  Similarity=1.031  Sum_probs=41.0

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcc
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLC  349 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~C  349 (366)
                      |.++|+++++|.|.++.|++.|..+..|.+|+++|+++++|+|++|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4567999999999522599999999999999999999999999988

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=5.1e-10  Score=76.59  Aligned_cols=43  Identities=40%  Similarity=0.655  Sum_probs=40.0

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecC
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT  347 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~  347 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|+++++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSS--SCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcc--cCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4788899999999955  999999999999999999999999997

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.84  E-value=1.9e-09  Score=83.74  Aligned_cols=52  Identities=25%  Similarity=0.425  Sum_probs=48.0

Q ss_pred             ceecCCCCCCCcccChHHHHHHhhh-hcCCCC--------eecCccccccCChhHHHHHhhcC
Q psy1991         313 PYQCGWKGCGWKFARSDELTRHFRK-HTGDRP--------FQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       313 pf~C~i~~CgKsF~sk~~L~~H~rt-HtgeKp--------ykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .+.|  ..|++.|.....|.+|+++ |.++++        |.|++|++.|.++..|.+|+++|
T Consensus        25 ~~~C--~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H   85 (95)
T 2ej4_A           25 SRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH   85 (95)
T ss_dssp             SSSC--CCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHH
T ss_pred             CCcc--cccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhc
Confidence            4679  4599999999999999998 999888        99999999999999999999986

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=5.7e-10  Score=75.31  Aligned_cols=43  Identities=35%  Similarity=0.644  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecC
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT  347 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~  347 (366)
                      .|+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETT--TTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCC--CCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4788899999999955  999999999999999999999999985

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=7.8e-10  Score=75.64  Aligned_cols=43  Identities=33%  Similarity=0.580  Sum_probs=39.7

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecC
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT  347 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~  347 (366)
                      .|+++|+++++|.|.+  |++.|..+..|.+|+++|+++++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSS--SCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3778899999999955  999999999999999999999999997

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=2.4e-09  Score=78.93  Aligned_cols=56  Identities=18%  Similarity=0.438  Sum_probs=50.4

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCC-CCCCcccChHHHHHHhhhhcCCCC
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWK-GCGWKFARSDELTRHFRKHTGDRP  343 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~-~CgKsF~sk~~L~~H~rtHtgeKp  343 (366)
                      +.+.|..  |++.|. ...|..|+++ +++++|.|  + .|++.|..+..|.+|+++|...++
T Consensus         9 ~~~~C~~--C~k~f~-~~~L~~H~~~-~~~~p~~C--~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            9 RTQPCTY--CTKEFV-FDTIQSHQYQ-CPRLPVAC--PNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CEEECSS--SCCEEE-HHHHHHHHHH-CSSSEEEC--TTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCeeccc--cCCccC-HHHHHHHHHH-cCCcCccC--CcccCcccccHHHHHHHHHhhcccCc
Confidence            4567877  999999 9999999999 99999999  5 599999999999999999987654

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=8.3e-10  Score=75.50  Aligned_cols=44  Identities=27%  Similarity=0.300  Sum_probs=40.2

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcC-CCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG-DRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtg-eKpykC~~  348 (366)
                      .|+++|.++++|.|.+  |++.|.+...|.+|+++|++ +++|+|++
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNK--CEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSS--SCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcC--CCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3778899999999955  99999999999999999999 99999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1e-09  Score=75.04  Aligned_cols=43  Identities=37%  Similarity=0.669  Sum_probs=39.4

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      |+++|+++++|.|.+  |++.|.++..|.+|+++|+++++|+|+.
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTT--TCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            567899999999955  9999999999999999999999999973

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.1e-09  Score=73.97  Aligned_cols=43  Identities=23%  Similarity=0.461  Sum_probs=39.5

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecC
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT  347 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~  347 (366)
                      +|+++|.++++|.|.+  |++.|..+..|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSK--CDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSS--SSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCC--CCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4778899999999955  999999999999999999999999984

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.1e-09  Score=73.96  Aligned_cols=43  Identities=19%  Similarity=0.312  Sum_probs=39.6

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecC
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT  347 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~  347 (366)
                      +|+++|.++++|.|.+  |++.|.....|..|+++|+++++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSK--CQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTT--TCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4788899999999954  999999999999999999999999985

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=7.7e-10  Score=73.78  Aligned_cols=41  Identities=39%  Similarity=0.726  Sum_probs=38.3

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeec
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC  346 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC  346 (366)
                      |+++|+++++|.|.+  |++.|..+..|.+|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTT--TTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCC--ccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            678899999999955  99999999999999999999999988

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.81  E-value=1.2e-09  Score=72.76  Aligned_cols=41  Identities=32%  Similarity=0.593  Sum_probs=37.9

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeec
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC  346 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC  346 (366)
                      |+++|.++++|.|.+  |++.|..+..|.+|+++|++++||+|
T Consensus         2 H~~~H~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSS--SCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCC--CCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            567899999999955  99999999999999999999999988

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=9.2e-10  Score=73.56  Aligned_cols=41  Identities=37%  Similarity=0.686  Sum_probs=38.0

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeec
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC  346 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC  346 (366)
                      |+++|+++++|.|.  .|++.|.+...|.+|+++|++++||+|
T Consensus         2 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCE--TCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECT--TTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCC--CcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            67789999999995  499999999999999999999999988

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=8.1e-10  Score=75.56  Aligned_cols=44  Identities=27%  Similarity=0.592  Sum_probs=40.3

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +|+++|.++++|.|.+  |++.|.+...|.+|+++|+++++|+|+.
T Consensus         2 ~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSS--SCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999973

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=1.1e-09  Score=73.37  Aligned_cols=41  Identities=39%  Similarity=0.728  Sum_probs=37.9

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeec
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC  346 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC  346 (366)
                      |+++|.++++|.|.+  |++.|.++..|.+|+++|+++++|+|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSS--SCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCC--CCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            677899999999955  99999999999999999999999987

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1e-09  Score=74.70  Aligned_cols=44  Identities=39%  Similarity=0.643  Sum_probs=40.2

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|+++++|+|+.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETT--TTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCC--CChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778899999999955  9999999999999999999999999973

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.1e-09  Score=74.82  Aligned_cols=43  Identities=37%  Similarity=0.632  Sum_probs=39.8

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecC
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT  347 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~  347 (366)
                      +|+++|+++++|.|.+  |++.|..+..|.+|+++|+++++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcc--cChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999955  999999999999999999999999996

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=1.7e-09  Score=73.20  Aligned_cols=42  Identities=21%  Similarity=0.297  Sum_probs=38.7

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecC
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT  347 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~  347 (366)
                      |+++|.++++|.|.+  |++.|.....|.+|+++|+++++|+|+
T Consensus         3 h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQE--CGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTT--TCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            667899999999954  999999999999999999999999985

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.5e-09  Score=73.40  Aligned_cols=43  Identities=33%  Similarity=0.438  Sum_probs=39.4

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecC
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT  347 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~  347 (366)
                      +|+++|+++++|.|.+  |++.|.....|.+|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETT--TTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcc--cCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999955  999999999999999999999999984

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.73  E-value=1.3e-09  Score=77.51  Aligned_cols=45  Identities=13%  Similarity=0.326  Sum_probs=42.7

Q ss_pred             CCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         322 GWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       322 gKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|.|.....|..|+++|+++++|.|++||+.|.+.+.|.+|+++|
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   47 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELR   47 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHh
Confidence            578999999999999999999999999999999999999999876

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.6e-09  Score=71.74  Aligned_cols=43  Identities=33%  Similarity=0.503  Sum_probs=39.1

Q ss_pred             HHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecC
Q psy1991         303 AHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT  347 (366)
Q Consensus       303 ~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~  347 (366)
                      .|+++|+++++|.|.+  |++.|.....|.+|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNE--CGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCC--CCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            4778899999999955  999999999999999999999999873

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=4.2e-09  Score=72.05  Aligned_cols=42  Identities=29%  Similarity=0.497  Sum_probs=38.3

Q ss_pred             HHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         305 LRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       305 ~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      +++|+++++|.|.+  |++.|.++..|.+|+++|++++||+|++
T Consensus         4 ~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSS--SCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCC--CCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            46789999999955  9999999999999999999999999974

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.70  E-value=7.2e-09  Score=70.04  Aligned_cols=41  Identities=20%  Similarity=0.408  Sum_probs=37.3

Q ss_pred             HhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         306 RTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       306 rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      ++|+++++|.|.+  |++.|..+..|.+|+++|+++++|+|++
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNE--CDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSS--SCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCC--CCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            4588999999954  9999999999999999999999999974

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=3.5e-09  Score=71.97  Aligned_cols=42  Identities=33%  Similarity=0.616  Sum_probs=38.0

Q ss_pred             HHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCc
Q psy1991         305 LRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTL  348 (366)
Q Consensus       305 ~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~  348 (366)
                      .++|.++++|.|.+  |++.|.++..|.+|+++|+++++|+|+.
T Consensus         4 ~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETT--TTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCC--CCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            45689999999955  9999999999999999999999999973

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=7.8e-10  Score=85.22  Aligned_cols=64  Identities=23%  Similarity=0.287  Sum_probs=53.8

Q ss_pred             chhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         298 SSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       298 kssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +..|..|+++|.+++++.|.+  |++.|. ...|..|+ .|.+++++.|+.|++.|. +..|..|+++|
T Consensus         2 ~~~L~~H~~~~c~~r~~~C~~--C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c   65 (75)
T 2d9k_A            2 SSGSSGHEETECPLRLAVCQH--CDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVC   65 (75)
T ss_dssp             CCCCSCCCCCCCCCCCEECSS--SCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHB
T ss_pred             chHHHhhCcccCCCcccCCcc--cChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHc
Confidence            346778888889999999955  999994 88899998 889999999999999887 48888898765

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.2e-08  Score=67.85  Aligned_cols=39  Identities=36%  Similarity=0.637  Sum_probs=35.9

Q ss_pred             HhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeec
Q psy1991         306 RTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC  346 (366)
Q Consensus       306 rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC  346 (366)
                      ++|+++++|.|.+  |++.|..+..|..|+++|++++||+|
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQE--CGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSS--SCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCC--CCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            3588999999955  99999999999999999999999988

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.57  E-value=1.7e-08  Score=65.28  Aligned_cols=35  Identities=43%  Similarity=0.750  Sum_probs=17.6

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcC
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG  340 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtg  340 (366)
                      |+++|+++++|.|.  .|++.|..+..|.+|+++|++
T Consensus         2 H~~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCP--DCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCT--TTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCC--CCCcccCcHHHHHHHHHHhcc
Confidence            34445555555552  255555555555555555544

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.7e-08  Score=66.09  Aligned_cols=33  Identities=30%  Similarity=0.709  Sum_probs=31.4

Q ss_pred             HhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       334 H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   33 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMH   33 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHT
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHh
Confidence            678899999999999999999999999999987

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.50  E-value=2.7e-08  Score=66.24  Aligned_cols=33  Identities=33%  Similarity=0.788  Sum_probs=31.3

Q ss_pred             HhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       334 H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   33 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTH   33 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhc
Confidence            678999999999999999999999999999986

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=3e-08  Score=67.42  Aligned_cols=34  Identities=32%  Similarity=0.668  Sum_probs=32.4

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH   35 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHc
Confidence            5889999999999999999999999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=3.4e-08  Score=67.17  Aligned_cols=34  Identities=32%  Similarity=0.616  Sum_probs=32.4

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|.|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH   35 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHT
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHc
Confidence            5889999999999999999999999999999987

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=3.2e-08  Score=66.52  Aligned_cols=34  Identities=38%  Similarity=0.744  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTH   35 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTS
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHc
Confidence            4889999999999999999999999999999987

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=2.3e-08  Score=66.42  Aligned_cols=34  Identities=29%  Similarity=0.741  Sum_probs=32.2

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   34 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH   34 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGT
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHh
Confidence            4788999999999999999999999999999987

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=3.3e-08  Score=67.24  Aligned_cols=34  Identities=29%  Similarity=0.680  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH   35 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTT
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhh
Confidence            4889999999999999999999999999999987

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=3e-08  Score=66.80  Aligned_cols=34  Identities=29%  Similarity=0.714  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.++..|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH   35 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhc
Confidence            5889999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.47  E-value=3.7e-08  Score=66.82  Aligned_cols=34  Identities=29%  Similarity=0.647  Sum_probs=32.4

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH   35 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGS
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.47  E-value=3.4e-08  Score=67.00  Aligned_cols=34  Identities=29%  Similarity=0.564  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH   35 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhc
Confidence            5889999999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=4.1e-08  Score=66.77  Aligned_cols=34  Identities=29%  Similarity=0.679  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH   35 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGT
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhc
Confidence            4889999999999999999999999999999987

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=3.3e-08  Score=66.29  Aligned_cols=34  Identities=29%  Similarity=0.606  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|.|++||+.|.++..|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH   35 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTT
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhc
Confidence            5889999999999999999999999999999987

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=3.5e-08  Score=66.16  Aligned_cols=34  Identities=29%  Similarity=0.752  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH   35 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHT
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHh
Confidence            5889999999999999999999999999999987

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=3.4e-08  Score=67.28  Aligned_cols=34  Identities=32%  Similarity=0.691  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIH   35 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHh
Confidence            4889999999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=4.7e-08  Score=66.61  Aligned_cols=34  Identities=41%  Similarity=0.723  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH   35 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGT
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHh
Confidence            4889999999999999999999999999999987

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=3.9e-08  Score=66.72  Aligned_cols=34  Identities=29%  Similarity=0.672  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH   35 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGT
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhc
Confidence            4889999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=3.7e-08  Score=66.84  Aligned_cols=34  Identities=29%  Similarity=0.623  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH   35 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTT
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHc
Confidence            5889999999999999999999999999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.46  E-value=3.5e-08  Score=67.10  Aligned_cols=34  Identities=26%  Similarity=0.596  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH   35 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGG
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHc
Confidence            5889999999999999999999999999999986

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=3.4e-08  Score=67.18  Aligned_cols=34  Identities=35%  Similarity=0.804  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH   35 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999986

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=3.5e-08  Score=66.75  Aligned_cols=34  Identities=26%  Similarity=0.634  Sum_probs=32.2

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|+|++|++.|.+.+.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTH   35 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHh
Confidence            4789999999999999999999999999999986

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=4.5e-08  Score=65.30  Aligned_cols=33  Identities=24%  Similarity=0.671  Sum_probs=31.5

Q ss_pred             HhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       334 H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   34 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH   34 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTT
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhc
Confidence            678999999999999999999999999999987

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=3.6e-08  Score=67.06  Aligned_cols=34  Identities=35%  Similarity=0.717  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|.|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH   35 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGG
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHc
Confidence            5889999999999999999999999999999987

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=4.1e-08  Score=66.62  Aligned_cols=34  Identities=32%  Similarity=0.776  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH   35 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTS
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHh
Confidence            4888999999999999999999999999999987

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=4.7e-08  Score=66.58  Aligned_cols=34  Identities=26%  Similarity=0.669  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH   35 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHh
Confidence            3788999999999999999999999999999987

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=3.9e-08  Score=66.70  Aligned_cols=34  Identities=29%  Similarity=0.694  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.++..|.+|+++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH   35 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHc
Confidence            5889999999999999999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=2.2e-08  Score=68.27  Aligned_cols=34  Identities=38%  Similarity=0.812  Sum_probs=32.2

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|.|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH   35 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHH
Confidence            5889999999999999999999999999999876

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=4.2e-08  Score=66.87  Aligned_cols=34  Identities=32%  Similarity=0.744  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|.|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH   35 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGG
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhc
Confidence            5889999999999999999999999999999987

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=3.8e-08  Score=66.92  Aligned_cols=34  Identities=29%  Similarity=0.700  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH   35 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTT
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhc
Confidence            4888999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.45  E-value=3.7e-08  Score=66.97  Aligned_cols=34  Identities=35%  Similarity=0.674  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH   35 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGG
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhc
Confidence            5889999999999999999999999999999886

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=3.9e-08  Score=66.85  Aligned_cols=34  Identities=29%  Similarity=0.641  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.++..|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH   35 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTT
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=3.9e-08  Score=66.71  Aligned_cols=34  Identities=32%  Similarity=0.726  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|.|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH   35 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTT
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhc
Confidence            5889999999999999999999999999999987

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=4.7e-08  Score=66.45  Aligned_cols=34  Identities=32%  Similarity=0.671  Sum_probs=32.2

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIH   35 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHh
Confidence            4889999999999999999999999999999986

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.44  E-value=3.3e-08  Score=67.35  Aligned_cols=34  Identities=35%  Similarity=0.754  Sum_probs=32.2

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH   35 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHH
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHc
Confidence            5889999999999999999999999999999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=3.4e-08  Score=67.03  Aligned_cols=34  Identities=29%  Similarity=0.704  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH   35 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhc
Confidence            5889999999999999999999999999999876

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=4.1e-08  Score=66.60  Aligned_cols=34  Identities=26%  Similarity=0.705  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH   35 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGG
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999986

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=4.3e-08  Score=66.48  Aligned_cols=34  Identities=21%  Similarity=0.491  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.+.+.|.+|+++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVH   35 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTT
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=4.4e-08  Score=66.58  Aligned_cols=34  Identities=32%  Similarity=0.704  Sum_probs=32.2

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH   35 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTT
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHc
Confidence            4788999999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=4.2e-08  Score=66.53  Aligned_cols=34  Identities=32%  Similarity=0.672  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH   35 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=5.1e-08  Score=66.26  Aligned_cols=34  Identities=26%  Similarity=0.792  Sum_probs=32.4

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|.|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH   35 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTT
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999987

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.43  E-value=3.6e-09  Score=84.31  Aligned_cols=55  Identities=25%  Similarity=0.340  Sum_probs=41.0

Q ss_pred             HHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhc
Q psy1991         305 LRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKR  365 (366)
Q Consensus       305 ~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~Kt  365 (366)
                      .++|+++++|.|.+  |++.|.....|..|+++|++++||+|..|.+    +..|..|.++
T Consensus        17 ~~~H~~~kpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~   71 (88)
T 1x6f_A           17 NGPRLQNSTYQCKH--CDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKY   71 (88)
T ss_dssp             CCSCCCCSCEECSS--SCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCC
T ss_pred             ccccCCCCCCcCCC--CCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhcc
Confidence            44588888899944  9999999999999988898888898877653    3344444443

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=3.9e-08  Score=66.72  Aligned_cols=34  Identities=29%  Similarity=0.736  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH   35 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGG
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHc
Confidence            5889999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=3.3e-08  Score=67.25  Aligned_cols=34  Identities=38%  Similarity=0.720  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH   35 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhc
Confidence            5889999999999999999999999999999876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=3.4e-08  Score=66.99  Aligned_cols=34  Identities=35%  Similarity=0.673  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH   35 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHh
Confidence            4889999999999999999999999999999876

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.43  E-value=3.4e-08  Score=67.33  Aligned_cols=34  Identities=35%  Similarity=0.719  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|.|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIH   35 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHh
Confidence            4889999999999999999999999999999876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=5.6e-08  Score=66.06  Aligned_cols=34  Identities=29%  Similarity=0.649  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH   35 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhc
Confidence            4889999999999999999999999999999987

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=5.1e-08  Score=66.41  Aligned_cols=34  Identities=29%  Similarity=0.672  Sum_probs=32.2

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH   35 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHc
Confidence            4888999999999999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=5e-08  Score=66.17  Aligned_cols=34  Identities=29%  Similarity=0.633  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|.|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH   35 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhc
Confidence            5889999999999999999999999999999886

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=6.1e-08  Score=66.17  Aligned_cols=33  Identities=36%  Similarity=0.753  Sum_probs=31.6

Q ss_pred             HhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       334 H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |+++|+++++|+|++|++.|.++..|.+|+++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH   35 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTT
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhc
Confidence            788999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=3.6e-08  Score=67.01  Aligned_cols=34  Identities=32%  Similarity=0.542  Sum_probs=32.2

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|.|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH   35 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHc
Confidence            5889999999999999999999999999999876

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=3.4e-08  Score=67.34  Aligned_cols=34  Identities=32%  Similarity=0.762  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH   35 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHc
Confidence            5889999999999999999999999999999876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=4.7e-08  Score=66.45  Aligned_cols=34  Identities=29%  Similarity=0.679  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH   35 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHc
Confidence            5889999999999999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=4.7e-08  Score=66.61  Aligned_cols=34  Identities=26%  Similarity=0.513  Sum_probs=32.4

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH   35 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=5.9e-08  Score=65.94  Aligned_cols=34  Identities=35%  Similarity=0.618  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|+|++|++.|.++..|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH   35 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTT
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHh
Confidence            3788999999999999999999999999999987

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=5.8e-08  Score=65.98  Aligned_cols=34  Identities=32%  Similarity=0.673  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|+|++|++.|.++..|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIH   35 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTT
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHh
Confidence            4888999999999999999999999999999987

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=3.8e-08  Score=65.50  Aligned_cols=33  Identities=27%  Similarity=0.652  Sum_probs=31.3

Q ss_pred             HhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       334 H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |+++|+++++|+|+.||+.|.+++.|.+|+++|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   34 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH   34 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHH
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHc
Confidence            788999999999999999999999999999876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=4.9e-08  Score=66.34  Aligned_cols=34  Identities=26%  Similarity=0.685  Sum_probs=32.4

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH   35 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGG
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHc
Confidence            5889999999999999999999999999999986

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=4.1e-08  Score=66.12  Aligned_cols=33  Identities=36%  Similarity=0.773  Sum_probs=31.2

Q ss_pred             HhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       334 H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   33 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTH   33 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHh
Confidence            678999999999999999999999999999876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=6.3e-08  Score=65.94  Aligned_cols=34  Identities=21%  Similarity=0.576  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH   35 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGG
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhc
Confidence            3788999999999999999999999999999987

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=3.1e-08  Score=67.51  Aligned_cols=34  Identities=35%  Similarity=0.788  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH   35 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHH
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999876

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=6.7e-08  Score=65.81  Aligned_cols=34  Identities=32%  Similarity=0.729  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH   35 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTT
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHh
Confidence            3788999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=3.4e-08  Score=67.14  Aligned_cols=34  Identities=35%  Similarity=0.683  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTH   35 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHc
Confidence            5889999999999999999999999999999876

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=4.4e-08  Score=66.45  Aligned_cols=34  Identities=32%  Similarity=0.664  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|.|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH   35 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTS
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999987

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.42  E-value=5.9e-08  Score=64.41  Aligned_cols=33  Identities=21%  Similarity=0.618  Sum_probs=31.4

Q ss_pred             HhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       334 H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H   34 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC   34 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHT
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhc
Confidence            678999999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=6.2e-08  Score=65.83  Aligned_cols=34  Identities=26%  Similarity=0.541  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH   35 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGG
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHh
Confidence            4788999999999999999999999999999987

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=3.6e-08  Score=66.87  Aligned_cols=34  Identities=29%  Similarity=0.698  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATH   35 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHc
Confidence            5888999999999999999999999999999876

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=5.6e-08  Score=66.19  Aligned_cols=34  Identities=29%  Similarity=0.516  Sum_probs=32.2

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|.|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIH   35 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHc
Confidence            4788999999999999999999999999999987

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=3.6e-08  Score=67.03  Aligned_cols=34  Identities=38%  Similarity=0.638  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.++..|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH   35 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHH
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.42  E-value=6.5e-08  Score=65.60  Aligned_cols=34  Identities=26%  Similarity=0.600  Sum_probs=32.2

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|.|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH   35 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGG
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHh
Confidence            4889999999999999999999999999999986

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=5.4e-08  Score=65.51  Aligned_cols=34  Identities=24%  Similarity=0.496  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|.|++||+.|.+.+.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTH   35 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGG
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHc
Confidence            5889999999999999999999999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=3.7e-08  Score=66.97  Aligned_cols=34  Identities=29%  Similarity=0.741  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH   35 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHH
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhc
Confidence            5889999999999999999999999999999876

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=3.9e-08  Score=66.85  Aligned_cols=34  Identities=35%  Similarity=0.836  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH   35 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999876

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=5e-08  Score=66.47  Aligned_cols=34  Identities=32%  Similarity=0.654  Sum_probs=32.0

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSH   35 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhc
Confidence            4889999999999999999999999999999876

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.40  E-value=1.6e-07  Score=61.69  Aligned_cols=37  Identities=24%  Similarity=0.486  Sum_probs=32.9

Q ss_pred             hcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeec
Q psy1991         308 HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC  346 (366)
Q Consensus       308 H~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC  346 (366)
                      |+++++|.|.+  |++.|.....|..|+++|+++++|.+
T Consensus         1 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSF--CKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTT--TCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCC--CCcccCCHHHHHHHHHHcCCCcccee
Confidence            67889999955  99999999999999999999999875

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=4.6e-08  Score=66.66  Aligned_cols=34  Identities=35%  Similarity=0.804  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|.++++|+|++|++.|.+.+.|.+|+++|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH   35 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHH
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHh
Confidence            4789999999999999999999999999999876

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=8e-08  Score=65.42  Aligned_cols=33  Identities=33%  Similarity=0.778  Sum_probs=31.6

Q ss_pred             HhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       334 H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |+++|+++++|+|++|++.|.++..|.+|+++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH   35 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGS
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHh
Confidence            678999999999999999999999999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=6.3e-08  Score=65.81  Aligned_cols=34  Identities=26%  Similarity=0.656  Sum_probs=32.2

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH   35 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTS
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhh
Confidence            4788999999999999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.39  E-value=5.5e-08  Score=66.24  Aligned_cols=34  Identities=38%  Similarity=0.764  Sum_probs=32.0

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH   35 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHH
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHc
Confidence            4789999999999999999999999999999876

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=8.2e-08  Score=65.22  Aligned_cols=34  Identities=24%  Similarity=0.594  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH   35 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHh
Confidence            4788999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=4.8e-08  Score=66.41  Aligned_cols=34  Identities=26%  Similarity=0.730  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH   35 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHH
Confidence            5889999999999999999999999999999876

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=6.3e-08  Score=65.68  Aligned_cols=34  Identities=29%  Similarity=0.646  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|.|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH   35 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhc
Confidence            4889999999999999999999999999999876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=4.3e-08  Score=66.64  Aligned_cols=34  Identities=29%  Similarity=0.702  Sum_probs=32.3

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH   35 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGG
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHc
Confidence            5889999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=5.3e-08  Score=66.17  Aligned_cols=34  Identities=32%  Similarity=0.751  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH   35 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHc
Confidence            5889999999999999999999999999999876

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.38  E-value=2e-07  Score=60.56  Aligned_cols=37  Identities=35%  Similarity=0.695  Sum_probs=32.0

Q ss_pred             hcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCe
Q psy1991         308 HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF  344 (366)
Q Consensus       308 H~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpy  344 (366)
                      |+++++|.|.++.|++.|..+..|.+|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5788999995336999999999999999999999886

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.37  E-value=7.7e-08  Score=65.50  Aligned_cols=34  Identities=29%  Similarity=0.614  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.++..|.+|+++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH   35 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHc
Confidence            4788999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.37  E-value=2.1e-07  Score=65.95  Aligned_cols=44  Identities=27%  Similarity=0.544  Sum_probs=38.4

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHH-hhcCCCceecCCCCCCCcccCh
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLR-THTGEKPYQCGWKGCGWKFARS  328 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~r-tH~~eKpf~C~i~~CgKsF~sk  328 (366)
                      .+.+.|..  |++.|.+...|.+|++ +|.++++|.|.+  |++.|.+.
T Consensus        10 ~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~k~~~C~~--C~k~F~~~   54 (54)
T 2eps_A           10 GKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV--WVSGPSSG   54 (54)
T ss_dssp             SCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSSS--SCCSSCCC
T ss_pred             CCCeECCC--CCcccCCHHHHHHHHHHhcCCCCCccCCC--CCCCCCCC
Confidence            35567777  9999999999999997 899999999955  99999863

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.37  E-value=5.9e-08  Score=66.10  Aligned_cols=34  Identities=26%  Similarity=0.645  Sum_probs=32.0

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH   35 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHc
Confidence            4788999999999999999999999999999876

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=7.5e-08  Score=65.55  Aligned_cols=34  Identities=32%  Similarity=0.751  Sum_probs=31.9

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|+|++|++.|.++..|.+|+++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH   35 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHh
Confidence            4788999999999999999999999999999876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.35  E-value=7.7e-08  Score=65.65  Aligned_cols=34  Identities=26%  Similarity=0.625  Sum_probs=31.8

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH   35 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHH
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHc
Confidence            3788999999999999999999999999999876

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.35  E-value=1.2e-07  Score=64.46  Aligned_cols=34  Identities=29%  Similarity=0.616  Sum_probs=32.0

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhh-cC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMK-RH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~K-tH  366 (366)
                      .|+++|+++++|+|++||+.|.+++.|.+|++ +|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H   36 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH   36 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTT
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhc
Confidence            47899999999999999999999999999998 76

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.35  E-value=5.7e-08  Score=66.01  Aligned_cols=34  Identities=29%  Similarity=0.676  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH   35 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHc
Confidence            4788999999999999999999999999999876

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.34  E-value=4e-08  Score=66.19  Aligned_cols=34  Identities=32%  Similarity=0.568  Sum_probs=32.1

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++++|+|++|++.|.+.+.|.+|+++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H   35 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH   35 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHH
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999876

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=1e-07  Score=61.49  Aligned_cols=36  Identities=14%  Similarity=0.422  Sum_probs=29.2

Q ss_pred             HhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCC
Q psy1991         306 RTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP  343 (366)
Q Consensus       306 rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKp  343 (366)
                      ++|.++++|.|.+  |++.|..+..|.+|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPV--CEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETT--TTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCC--CCCccCCHHHHHHHHHHHcCCCC
Confidence            4678888888844  88888888888888888888764

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=8.8e-08  Score=65.08  Aligned_cols=34  Identities=21%  Similarity=0.274  Sum_probs=31.9

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLH   35 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHh
Confidence            4788999999999999999999999999999876

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=1.4e-07  Score=60.85  Aligned_cols=32  Identities=25%  Similarity=0.619  Sum_probs=28.1

Q ss_pred             hhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         335 FRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       335 ~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +++|+++++|.|+.||+.|.+++.|.+|+++|
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h   32 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTN   32 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHH
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHH
Confidence            35788999999999999999999999998875

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.33  E-value=9.8e-08  Score=64.97  Aligned_cols=34  Identities=24%  Similarity=0.662  Sum_probs=31.8

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++|.++++|+|++|++.|.++..|.+|+++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH   35 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHH
Confidence            3788999999999999999999999999999876

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=1.4e-07  Score=61.50  Aligned_cols=34  Identities=24%  Similarity=0.495  Sum_probs=20.9

Q ss_pred             HhhcCCCceecCCCCCCCcccChHHHHHH-hhhhcCC
Q psy1991         306 RTHTGEKPYQCGWKGCGWKFARSDELTRH-FRKHTGD  341 (366)
Q Consensus       306 rtH~~eKpf~C~i~~CgKsF~sk~~L~~H-~rtHtge  341 (366)
                      ++|+++++|.|  +.|++.|..+..|.+| +++|+++
T Consensus         2 ~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYC--SQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEEC--SSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeEC--CCCCcccCCHHHHHHHHHHHccCc
Confidence            34666666666  3366666666666666 6666543

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.31  E-value=3.4e-07  Score=71.40  Aligned_cols=41  Identities=27%  Similarity=0.482  Sum_probs=35.0

Q ss_pred             hcCCCceecCCCCCCCcccChHHHHHHh-hhhcCCCCeecCc
Q psy1991         308 HTGEKPYQCGWKGCGWKFARSDELTRHF-RKHTGDRPFQCTL  348 (366)
Q Consensus       308 H~~eKpf~C~i~~CgKsF~sk~~L~~H~-rtHtgeKpykC~~  348 (366)
                      ++++|||+|.++.|+|.|.+...|.+|+ ++|+++|||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            5789999996556999999999999997 6899999998854

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.30  E-value=2.2e-07  Score=59.92  Aligned_cols=33  Identities=64%  Similarity=1.090  Sum_probs=31.5

Q ss_pred             HhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       334 H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |+++|++++||+|+.|++.|.++..|.+|+++|
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   34 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHh
Confidence            788999999999999999999999999999986

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.30  E-value=2.9e-07  Score=58.34  Aligned_cols=35  Identities=31%  Similarity=0.528  Sum_probs=28.3

Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCC
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP  343 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKp  343 (366)
                      +|+++++|.|.+  |++.|..+..|.+|+++|++++|
T Consensus         1 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCAL--CLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSS--SCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCC--CcchhCCHHHHHHHHHHHcCCCC
Confidence            367888888844  88888888888888888888764

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.29  E-value=1.3e-07  Score=63.73  Aligned_cols=33  Identities=21%  Similarity=0.313  Sum_probs=31.2

Q ss_pred             HhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       334 H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |+++|.++++|.|++|++.|.+.+.|.+|+++|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALH   35 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHH
Confidence            678999999999999999999999999999876

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.28  E-value=3.2e-07  Score=58.40  Aligned_cols=35  Identities=26%  Similarity=0.588  Sum_probs=28.4

Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCC
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRP  343 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKp  343 (366)
                      +|.++++|.|.+  |++.|..+..|.+|+++|++++|
T Consensus         1 ~H~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRI--CLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSS--SCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHHcCCCCC
Confidence            367888888844  88888888888888888888764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.28  E-value=5.3e-07  Score=57.08  Aligned_cols=30  Identities=27%  Similarity=0.582  Sum_probs=26.0

Q ss_pred             hhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         337 KHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       337 tHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++++|.|++|++.|.+++.|.+|+++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h   30 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREV   30 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHT
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHH
Confidence            477888999999999999999999998876

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.25  E-value=6.7e-07  Score=56.87  Aligned_cols=30  Identities=37%  Similarity=0.809  Sum_probs=26.5

Q ss_pred             hhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         337 KHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       337 tHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++++|+|++||+.|.+++.|.+|+++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H   30 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVH   30 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHc
Confidence            478889999999999999999999998876

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.23  E-value=1.6e-07  Score=64.84  Aligned_cols=41  Identities=24%  Similarity=0.525  Sum_probs=29.7

Q ss_pred             HHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         302 KAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       302 k~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      ..|...|.++++|.|.++.|++.|..+..|.+|+++|++++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            34445578888888843358888888888888888887764

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.22  E-value=2.7e-07  Score=62.48  Aligned_cols=33  Identities=33%  Similarity=0.700  Sum_probs=30.7

Q ss_pred             HhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       334 H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |.++|+++++|+|++|++.|.++..|.+|+++|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH   35 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTT
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHh
Confidence            456899999999999999999999999999987

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=4.8e-07  Score=58.04  Aligned_cols=34  Identities=24%  Similarity=0.413  Sum_probs=23.5

Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      .|.++++|.|.+  |++.|..+..|.+|+++|++++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHI--CERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSS--SCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCC--CCCccCCHHHHHHHHHHhcCCC
Confidence            466677777743  7777777777777777776653

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=5.6e-07  Score=59.52  Aligned_cols=31  Identities=29%  Similarity=0.737  Sum_probs=29.4

Q ss_pred             hhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         336 RKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       336 rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ++|+++++|+|++|++.|.++..|.+|+++|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H   33 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIH   33 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHh
Confidence            4789999999999999999999999999987

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.22  E-value=4.4e-07  Score=62.49  Aligned_cols=40  Identities=35%  Similarity=0.617  Sum_probs=35.3

Q ss_pred             ccceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCC
Q psy1991         280 KIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGW  323 (366)
Q Consensus       280 H~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgK  323 (366)
                      ..+.+.|..  |++.|.+...|.+|+++|+++++|.|.+  |+|
T Consensus         9 ~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C~k   48 (48)
T 2epr_A            9 TRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGP--SSG   48 (48)
T ss_dssp             CCCSEEETT--TTEEESSHHHHHHHGGGSCSCCCCCSCC--CCC
T ss_pred             CCcCeeCCC--CCcccCCHHHHHHHHHhcCCCCCccCCC--CCC
Confidence            345677877  9999999999999999999999999955  986

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=5.5e-07  Score=57.76  Aligned_cols=34  Identities=21%  Similarity=0.673  Sum_probs=23.5

Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      +|.++++|.|.+  |++.|.....|.+|+++|++++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSL--CEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSS--SSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCC--CCchhCCHHHHHHHHHHhccCC
Confidence            466777777743  7777777777777777776653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=4e-07  Score=58.78  Aligned_cols=34  Identities=24%  Similarity=0.703  Sum_probs=24.3

Q ss_pred             hhcCCCceecCCCCCCCcccCh-HHHHHHhhhhcCCC
Q psy1991         307 THTGEKPYQCGWKGCGWKFARS-DELTRHFRKHTGDR  342 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk-~~L~~H~rtHtgeK  342 (366)
                      +|.++++|.|.+  |++.|..+ ..|.+|+++|++++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPY--CDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSS--SSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCC--CChhhccCHHHHHHHHHhcCCCC
Confidence            467777777743  77777777 77777777777653

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.20  E-value=4e-07  Score=61.73  Aligned_cols=33  Identities=27%  Similarity=0.758  Sum_probs=30.7

Q ss_pred             HhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       334 H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ++++|+++++|+|++|++.|.++..|.+|+++|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H   35 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH   35 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHh
Confidence            357899999999999999999999999999987

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=1.2e-06  Score=59.57  Aligned_cols=34  Identities=21%  Similarity=0.391  Sum_probs=24.8

Q ss_pred             hcCCCceecCCCCCCCcccChHHHHHHhhhhcCC
Q psy1991         308 HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGD  341 (366)
Q Consensus       308 H~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtge  341 (366)
                      +++++||+|.++.|++.|..+..|.+|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            5677788884334888888888888888888765

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=5.9e-07  Score=57.37  Aligned_cols=34  Identities=38%  Similarity=0.793  Sum_probs=25.8

Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      +|.++++|.|.+  |++.|..+..|.+|+++|++++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQ--CSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSS--SSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCC--CCcccCCHHHHHHHHHHccCCC
Confidence            467778888844  8888888888888888887763

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.17  E-value=7.8e-07  Score=61.80  Aligned_cols=35  Identities=26%  Similarity=0.685  Sum_probs=27.2

Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhh-hhcCCCC
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFR-KHTGDRP  343 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~r-tHtgeKp  343 (366)
                      +|+++++|.|.+  |++.|..+..|.+|++ +|+++..
T Consensus         1 ~Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCC--cCcccCCHHHHHHHhhhhcCCCCC
Confidence            478889999955  9999999999999998 8887653

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=5.2e-07  Score=61.43  Aligned_cols=33  Identities=21%  Similarity=0.456  Sum_probs=30.5

Q ss_pred             HhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       334 H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ++++|+++++|+|++|++.|.++..|.+|+++|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H   35 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH   35 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHh
Confidence            357899999999999999999999999999876

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.14  E-value=1.1e-06  Score=57.56  Aligned_cols=29  Identities=31%  Similarity=0.677  Sum_probs=26.9

Q ss_pred             hcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         338 HTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       338 HtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |+++++|.|++||+.|.+.+.|.+|+++|
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H   29 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVH   29 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHc
Confidence            67899999999999999999999999987

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.13  E-value=1.5e-06  Score=56.48  Aligned_cols=35  Identities=34%  Similarity=0.683  Sum_probs=26.2

Q ss_pred             hcCCCceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         308 HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       308 H~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      |+++++|.|.++.|++.|..+..|.+|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            66778888843258888888888888888887764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.13  E-value=8.1e-07  Score=60.34  Aligned_cols=30  Identities=20%  Similarity=0.424  Sum_probs=27.7

Q ss_pred             hhcCCCCeecCc--cccccCChhHHHHHhhcC
Q psy1991         337 KHTGDRPFQCTL--CERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       337 tHtgeKpykC~~--CgKsFs~kssLk~H~KtH  366 (366)
                      .+++++||+|+.  |+|+|.+++.|++|+++|
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~H   34 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVH   34 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            367899999986  999999999999999987

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.11  E-value=1.7e-06  Score=55.01  Aligned_cols=32  Identities=28%  Similarity=0.472  Sum_probs=27.0

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcCCCCee
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQ  345 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpyk  345 (366)
                      ++|.|.  .|++.|.....|..|+++|+++++|.
T Consensus         1 kp~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACP--ECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCS--SSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCC--CCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            478894  49999999999999999999988875

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=1e-06  Score=56.24  Aligned_cols=34  Identities=32%  Similarity=0.497  Sum_probs=25.3

Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      +|.++++|.|.+  |++.|..+..|.+|+++|++++
T Consensus         3 ~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDM--CGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTT--TCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCc--CCCCcCchHHHHHHHHHhcCCC
Confidence            366777888844  8888888888888888887664

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.08  E-value=9.9e-07  Score=59.28  Aligned_cols=31  Identities=26%  Similarity=0.525  Sum_probs=29.1

Q ss_pred             hhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         336 RKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       336 rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ++|+++++|+|+.|++.|.+++.|.+|+++|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H   33 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQT   33 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHH
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhh
Confidence            5789999999999999999999999999876

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.08  E-value=2.3e-06  Score=54.54  Aligned_cols=30  Identities=23%  Similarity=0.708  Sum_probs=26.8

Q ss_pred             hhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         337 KHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       337 tHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|.++++|+|++|++.|.++..|.+|+++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKH   32 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHc
Confidence            578899999999999999999999998876

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.07  E-value=1.9e-06  Score=55.14  Aligned_cols=31  Identities=26%  Similarity=0.514  Sum_probs=28.0

Q ss_pred             hhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         336 RKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       336 rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +.|+++++|+|++|++.|.+++.|.+|+++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVH   32 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTT
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHh
Confidence            3578899999999999999999999999887

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.07  E-value=1.7e-06  Score=55.78  Aligned_cols=31  Identities=23%  Similarity=0.554  Sum_probs=27.8

Q ss_pred             hhhcCCCCeecCccccccCCh-hHHHHHhhcC
Q psy1991         336 RKHTGDRPFQCTLCERAFSRS-DHLSLHMKRH  366 (366)
Q Consensus       336 rtHtgeKpykC~~CgKsFs~k-ssLk~H~KtH  366 (366)
                      ++|+++++|+|+.|++.|.++ +.|.+|+++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H   33 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAH   33 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHH
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhc
Confidence            468899999999999999999 9999999876

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.06  E-value=1.6e-06  Score=52.41  Aligned_cols=26  Identities=27%  Similarity=0.735  Sum_probs=21.4

Q ss_pred             CCCeecCccccccCChhHHHHHhhcC
Q psy1991         341 DRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       341 eKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ++||+|+.||+.|.+++.|.+|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            46788888888888888888888876

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.06  E-value=2e-06  Score=51.62  Aligned_cols=26  Identities=27%  Similarity=0.797  Sum_probs=20.6

Q ss_pred             CCCeecCccccccCChhHHHHHhhcC
Q psy1991         341 DRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       341 eKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ++||+|+.||+.|.+.+.|.+|+++|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            46788888888888888888888776

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=2.2e-06  Score=54.86  Aligned_cols=31  Identities=39%  Similarity=0.816  Sum_probs=28.1

Q ss_pred             hhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         336 RKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       336 rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +.|.++++|+|++|++.|.+.+.|.+|+++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRH   32 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHS
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHh
Confidence            3588999999999999999999999999887

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=1.6e-06  Score=55.48  Aligned_cols=34  Identities=26%  Similarity=0.597  Sum_probs=26.3

Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      .|.++++|.|.+  |++.|.....|..|+++|++++
T Consensus         3 ~~~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEY--CNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTT--TCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCC--CCceeCCHHHHHHHHHHhCCCC
Confidence            366778888844  8888888888888888887764

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.04  E-value=1.9e-06  Score=58.12  Aligned_cols=38  Identities=21%  Similarity=0.431  Sum_probs=33.7

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCC
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCG  322 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~Cg  322 (366)
                      .+.+.|..  |++.|.++..|..|+++|+++++|.|++  ||
T Consensus         8 ~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~--cg   45 (45)
T 2epq_A            8 EKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKSGPS--SG   45 (45)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHHHSCCCCCCCCC--CC
T ss_pred             CCCCcCCC--CCcccCCHHHHHHHHHHccCCCCCCCcC--CC
Confidence            45677877  9999999999999999999999999955  86

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=3.4e-06  Score=53.69  Aligned_cols=30  Identities=20%  Similarity=0.492  Sum_probs=26.0

Q ss_pred             hhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         337 KHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       337 tHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|.++++|.|++|++.|.++..|.+|+++|
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLH   32 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHH
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHh
Confidence            477888999999999999999999998876

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.00  E-value=2e-06  Score=55.92  Aligned_cols=32  Identities=16%  Similarity=0.380  Sum_probs=29.2

Q ss_pred             hhhhcCCCCeecCccccccCChhHHHHH-hhcC
Q psy1991         335 FRKHTGDRPFQCTLCERAFSRSDHLSLH-MKRH  366 (366)
Q Consensus       335 ~rtHtgeKpykC~~CgKsFs~kssLk~H-~KtH  366 (366)
                      +++|++++||+|+.||+.|.+++.|.+| +++|
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H   33 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKH   33 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHT
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHc
Confidence            3579999999999999999999999999 8876

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.98  E-value=1.9e-06  Score=58.60  Aligned_cols=33  Identities=48%  Similarity=0.789  Sum_probs=30.7

Q ss_pred             HhhhhcCCCCeecC--ccccccCChhHHHHHhhcC
Q psy1991         334 HFRKHTGDRPFQCT--LCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       334 H~rtHtgeKpykC~--~CgKsFs~kssLk~H~KtH  366 (366)
                      |.++|+++++|+|.  .|++.|.++..|.+|+++|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H   37 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH   37 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTS
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHh
Confidence            56789999999998  8999999999999999987

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.97  E-value=3.6e-06  Score=50.62  Aligned_cols=26  Identities=31%  Similarity=0.834  Sum_probs=20.1

Q ss_pred             CCCeecCccccccCChhHHHHHhhcC
Q psy1991         341 DRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       341 eKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +++|+|+.||+.|.+.+.|.+|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTS
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhc
Confidence            46778888888888888888887766

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=5.5e-06  Score=52.94  Aligned_cols=30  Identities=23%  Similarity=0.630  Sum_probs=24.9

Q ss_pred             hhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         337 KHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       337 tHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|.++++|+|+.|++.|.+...|.+|+++|
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H   32 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIH   32 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHh
Confidence            467788888888888888888888888775

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.96  E-value=5.8e-07  Score=61.94  Aligned_cols=36  Identities=25%  Similarity=0.603  Sum_probs=31.5

Q ss_pred             HHHHhhhhcCCCCeecC--ccccccCChhHHHHHhhcC
Q psy1991         331 LTRHFRKHTGDRPFQCT--LCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       331 L~~H~rtHtgeKpykC~--~CgKsFs~kssLk~H~KtH  366 (366)
                      +..|...|+++++|+|+  .||+.|.+++.|++|+++|
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H   43 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH   43 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHH
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHc
Confidence            34566679999999996  7999999999999999986

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.95  E-value=1.1e-05  Score=60.62  Aligned_cols=54  Identities=20%  Similarity=0.583  Sum_probs=43.8

Q ss_pred             eeecCCCCCcccCchhHHHHHH-hhcCCC------ceecCCCCCCCcccChHHHHHHhhhh
Q psy1991         285 TCSHNGCGKTYTKSSHLKAHLR-THTGEK------PYQCGWKGCGWKFARSDELTRHFRKH  338 (366)
Q Consensus       285 ~C~~~~CgK~F~skssLk~H~r-tH~~eK------pf~C~i~~CgKsF~sk~~L~~H~rtH  338 (366)
                      .|.+.+|++.|.+...|..|+. .|.+.+      +|.|.|.+|++.+.....|.+|+++.
T Consensus         3 ~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            3 KCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             eEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            4777888999999988999974 577655      78888888888888888888888764

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.94  E-value=2.4e-06  Score=57.93  Aligned_cols=37  Identities=38%  Similarity=0.489  Sum_probs=32.5

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCC
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGC  321 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~C  321 (366)
                      .+.+.|..  |++.|.+...|..|+++|+++++|.|.+  |
T Consensus        10 ~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C   46 (46)
T 2ytt_A           10 EKPYQCSE--CGKSFSGSYRLTQHWITHTREKPSGPSS--G   46 (46)
T ss_dssp             CCTTCCSS--SCCCCSSHHHHHHHHTHHHHCCCCSCCC--C
T ss_pred             CCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC--C
Confidence            34566777  9999999999999999999999999954  7

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.90  E-value=4e-06  Score=54.27  Aligned_cols=29  Identities=41%  Similarity=0.946  Sum_probs=26.9

Q ss_pred             hcCCCCeecC--ccccccCChhHHHHHhhcC
Q psy1991         338 HTGDRPFQCT--LCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       338 HtgeKpykC~--~CgKsFs~kssLk~H~KtH  366 (366)
                      |+++++|+|+  .|++.|.+++.|.+|+++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H   31 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHh
Confidence            6789999999  5999999999999999876

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.89  E-value=6.3e-06  Score=57.10  Aligned_cols=30  Identities=27%  Similarity=0.732  Sum_probs=25.6

Q ss_pred             hhcCCCCeecCccccccCChhHHHHHhh-cC
Q psy1991         337 KHTGDRPFQCTLCERAFSRSDHLSLHMK-RH  366 (366)
Q Consensus       337 tHtgeKpykC~~CgKsFs~kssLk~H~K-tH  366 (366)
                      +|+++++|.|.+||+.|.++..|.+|++ +|
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H   31 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSH   31 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSS
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhc
Confidence            4788899999999999999999999988 76

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.88  E-value=4.5e-06  Score=54.20  Aligned_cols=30  Identities=20%  Similarity=0.671  Sum_probs=27.5

Q ss_pred             hhcCCCCeecCc--cccccCChhHHHHHhhcC
Q psy1991         337 KHTGDRPFQCTL--CERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       337 tHtgeKpykC~~--CgKsFs~kssLk~H~KtH  366 (366)
                      .|+++++|.|.+  ||+.|.+++.|.+|+++|
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H   33 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWH   33 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            378999999995  999999999999999986

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.87  E-value=7e-06  Score=49.44  Aligned_cols=26  Identities=35%  Similarity=0.798  Sum_probs=19.1

Q ss_pred             CCCeecCccccccCChhHHHHHhhcC
Q psy1991         341 DRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       341 eKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +++|.|+.||+.|.....|..|+++|
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h   26 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETH   26 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTT
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHh
Confidence            35677777777777777777777765

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.06  E-value=2.1e-06  Score=51.00  Aligned_cols=25  Identities=32%  Similarity=0.895  Sum_probs=20.2

Q ss_pred             CCeecCccccccCChhHHHHHhhcC
Q psy1991         342 RPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       342 KpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +||.|+.||+.|.+.+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4688888888888888888888776

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.82  E-value=7.5e-06  Score=55.09  Aligned_cols=26  Identities=23%  Similarity=0.477  Sum_probs=16.5

Q ss_pred             hcCCCceecCCCCCCCcccChHHHHHHh
Q psy1991         308 HTGEKPYQCGWKGCGWKFARSDELTRHF  335 (366)
Q Consensus       308 H~~eKpf~C~i~~CgKsF~sk~~L~~H~  335 (366)
                      +.+++||.|  +.|+|+|.++..|++|+
T Consensus         3 ~~gekp~~C--~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMC--LPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEE--TTTTEECSCHHHHHHHH
T ss_pred             CCCccCeEC--CCCCCccCCHhHccCcC
Confidence            345666666  34666666666666666

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.78  E-value=7.5e-06  Score=62.21  Aligned_cols=41  Identities=20%  Similarity=0.280  Sum_probs=34.2

Q ss_pred             hcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCcccc
Q psy1991         308 HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCER  351 (366)
Q Consensus       308 H~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgK  351 (366)
                      |.++++|.|  ..|+|.|..+..|.+|+++|++++ ..|..++.
T Consensus         8 ~~~ekpy~C--~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~~   48 (66)
T 2epp_A            8 LREAGILPC--GLCGKVFTDANRLRQHEAQHGVTS-LQLGYIDL   48 (66)
T ss_dssp             CCCCCCCCC--TTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCCC
T ss_pred             CCCccCcCC--CCCCCccCCHHHHHhhhhhhCCCc-cccccccC
Confidence            678999999  559999999999999999999874 45655554

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.78  E-value=1.7e-05  Score=49.11  Aligned_cols=32  Identities=34%  Similarity=0.833  Sum_probs=22.2

Q ss_pred             CCceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       311 eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      +++|.|.++.|++.|.....|.+|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            35777741158888888888888887777653

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.78  E-value=9.3e-06  Score=48.87  Aligned_cols=25  Identities=48%  Similarity=0.922  Sum_probs=17.9

Q ss_pred             CCeecCccccccCChhHHHHHhhcC
Q psy1991         342 RPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       342 KpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +||.|+.||+.|.+.+.|..|+++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLH   25 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGG
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHh
Confidence            4677777777777777777777665

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.76  E-value=1.3e-05  Score=47.47  Aligned_cols=24  Identities=42%  Similarity=0.901  Sum_probs=18.3

Q ss_pred             CeecCccccccCChhHHHHHhhcC
Q psy1991         343 PFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       343 pykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ||+|+.||+.|.+++.|.+|+++|
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h   24 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVH   24 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHc
Confidence            477888888888888888887776

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.75  E-value=1.5e-06  Score=69.04  Aligned_cols=52  Identities=23%  Similarity=0.380  Sum_probs=43.5

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcC
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG  340 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtg  340 (366)
                      .+.+.|..  |++.|.+...|..|+++|+++++|.|  ..|    .....|..|.+.|.+
T Consensus        23 ~kpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C--~~~----~~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           23 NSTYQCKH--CDSKLQSTAELTSHLNIHNEEFQKRA--KRQ----ERRKQLLSKQKYADG   74 (88)
T ss_dssp             CSCEECSS--SCCEESSHHHHHHHHHHHHHHHHHHC--CCC----SCCCCCCCCCCCCCC
T ss_pred             CCCCcCCC--CCCEeCCHHHHHHHHHHhCCCCCccc--chh----hhHHHHHhhhccccc
Confidence            35567877  99999999999999999999999999  435    456677788888877

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.75  E-value=2.1e-05  Score=47.26  Aligned_cols=30  Identities=40%  Similarity=0.830  Sum_probs=25.0

Q ss_pred             CCceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       311 eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      +++|.|.  .|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCD--YCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECT--TTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCC--CCCcccCCHHHHHHHHHHhccCC
Confidence            4688994  49999999999999999988764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.74  E-value=2.1e-06  Score=54.11  Aligned_cols=31  Identities=26%  Similarity=0.521  Sum_probs=26.3

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcCCCCe
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF  344 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpy  344 (366)
                      ++|.|.  .|++.|..+..|.+|+++|++++||
T Consensus         1 kp~~C~--~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACP--ACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSS--SSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCC--CCCcccCCHHHHHHHHHHHccCCCC
Confidence            478894  4999999999999999999988876

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.74  E-value=7.9e-06  Score=62.55  Aligned_cols=54  Identities=24%  Similarity=0.481  Sum_probs=46.0

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      +...|..  |++.|. ...|..|+ .|.+++++.|.  .|++.|. ...|..|+++|.+++
T Consensus        16 r~~~C~~--C~~~~~-~~~L~~H~-~~c~~~~~~C~--~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           16 RLAVCQH--CDLELS-ILKLKEHE-DYCGARTELCG--NCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCEECSS--SCCEEC-HHHHHHHH-HHHHHCEEECS--SSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             cccCCcc--cChHhh-HHHHHHHH-hHcCCCceEcc--cCCCcCc-HHHHHHHHHHccCCc
Confidence            3445766  999995 89999999 89999999995  4999987 589999999998764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.72  E-value=1.1e-05  Score=48.38  Aligned_cols=25  Identities=48%  Similarity=1.068  Sum_probs=17.2

Q ss_pred             CCeecCccccccCChhHHHHHhhcC
Q psy1991         342 RPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       342 KpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ++|.|+.||+.|.+.+.|.+|+++|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h   25 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSH   25 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHH
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHh
Confidence            3567777777777777777776654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.72  E-value=2e-05  Score=48.52  Aligned_cols=31  Identities=55%  Similarity=1.202  Sum_probs=20.7

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      ++|.|.++.|++.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            4677742247777777777777777777653

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.85  E-value=5.8e-06  Score=50.08  Aligned_cols=26  Identities=31%  Similarity=0.782  Sum_probs=19.5

Q ss_pred             CCCeecCccccccCChhHHHHHhhcC
Q psy1991         341 DRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       341 eKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ++||.|+.||+.|.+...|.+|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h   26 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIH   26 (30)
Confidence            35677777888887777777777765

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.68  E-value=2.7e-05  Score=46.72  Aligned_cols=29  Identities=34%  Similarity=0.635  Sum_probs=23.5

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      ++|.|.  .|++.|.....|..|+++|++++
T Consensus         1 k~~~C~--~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACP--ECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECS--SSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCC--CCCchhCCHHHHHHHHHHhcCCC
Confidence            478884  49999998888999988888764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.67  E-value=1.9e-05  Score=48.86  Aligned_cols=26  Identities=46%  Similarity=0.957  Sum_probs=24.4

Q ss_pred             CCCeecC--ccccccCChhHHHHHhhcC
Q psy1991         341 DRPFQCT--LCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       341 eKpykC~--~CgKsFs~kssLk~H~KtH  366 (366)
                      ++||.|+  .||+.|.+.+.|.+|+++|
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H   28 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHc
Confidence            5789999  8999999999999999987

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.67  E-value=3e-05  Score=46.41  Aligned_cols=29  Identities=38%  Similarity=0.914  Sum_probs=23.1

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      ++|.|.+  |++.|.....|..|+++|++++
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTT--TCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCC--CCcccCCHHHHHHHHHHhcCCC
Confidence            4688844  8888888888888888888764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.64  E-value=1.6e-05  Score=47.41  Aligned_cols=25  Identities=28%  Similarity=0.773  Sum_probs=18.1

Q ss_pred             CCeecCccccccCChhHHHHHhhcC
Q psy1991         342 RPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       342 KpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +||.|+.||+.|.+...|..|+++|
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h   25 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIH   25 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHh
Confidence            4677777777777777777777654

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.80  E-value=7.2e-06  Score=49.62  Aligned_cols=25  Identities=36%  Similarity=0.966  Sum_probs=19.3

Q ss_pred             CCeecCccccccCChhHHHHHhhcC
Q psy1991         342 RPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       342 KpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +||+|+.||+.|.+.+.|..|+++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQH   25 (29)
Confidence            4677888888888888888887765

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.63  E-value=1.8e-05  Score=47.33  Aligned_cols=25  Identities=32%  Similarity=0.808  Sum_probs=17.0

Q ss_pred             CCeecCccccccCChhHHHHHhhcC
Q psy1991         342 RPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       342 KpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ++|.|+.||+.|.+...|..|+++|
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H   25 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIH   25 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHH
T ss_pred             CCccCCCCCCccCChhHHHHHHHHh
Confidence            3567777777777777777776654

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.62  E-value=1.8e-05  Score=47.53  Aligned_cols=25  Identities=32%  Similarity=0.669  Sum_probs=17.8

Q ss_pred             CCeecCccccccCChhHHHHHhhcC
Q psy1991         342 RPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       342 KpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ++|.|+.||+.|.+.+.|..|+++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h   25 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTK   25 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHH
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHH
Confidence            3577777777777777777777654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.62  E-value=2.7e-05  Score=47.93  Aligned_cols=25  Identities=52%  Similarity=1.075  Sum_probs=23.5

Q ss_pred             CCeecC--ccccccCChhHHHHHhhcC
Q psy1991         342 RPFQCT--LCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       342 KpykC~--~CgKsFs~kssLk~H~KtH  366 (366)
                      +||.|+  .||+.|.+.+.|.+|+++|
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H   27 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTH   27 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTT
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHh
Confidence            589998  9999999999999999987

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.61  E-value=3.5e-05  Score=45.99  Aligned_cols=29  Identities=41%  Similarity=0.917  Sum_probs=23.3

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      ++|.|.+  |++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRE--CGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTT--TSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCC--CCCccCChhHHHHHHHHhcCCC
Confidence            4688844  8888888888888888888764

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.61  E-value=2.8e-05  Score=60.59  Aligned_cols=39  Identities=23%  Similarity=0.388  Sum_probs=34.5

Q ss_pred             cccceeeeecCCCCCcccCchhHHHHH-HhhcCCCceecC
Q psy1991         279 RKIIMHTCSHNGCGKTYTKSSHLKAHL-RTHTGEKPYQCG  317 (366)
Q Consensus       279 ~H~k~H~C~~~~CgK~F~skssLk~H~-rtH~~eKpf~C~  317 (366)
                      .-.+.|.|.+++|+|.|.+...|.+|+ ++|++++|+.|.
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            345788898888999999999999998 689999999993

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.60  E-value=3.1e-05  Score=49.01  Aligned_cols=32  Identities=25%  Similarity=0.469  Sum_probs=28.1

Q ss_pred             eeeeecCCCCCcccCchhHHHHHHhhcCCCceec
Q psy1991         283 MHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQC  316 (366)
Q Consensus       283 ~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C  316 (366)
                      .+.|..  ||+.|.+...|..|+++|+++++|.+
T Consensus         2 p~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            2 KFACPE--CPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCSS--SCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             cccCCC--CCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            356766  99999999999999999999998853

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.59  E-value=4.1e-05  Score=45.91  Aligned_cols=30  Identities=30%  Similarity=0.610  Sum_probs=23.1

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcCCCC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDRP  343 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKp  343 (366)
                      ++|.|.  .|++.|.....|..|+++|+++++
T Consensus         1 k~~~C~--~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQ--YCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCS--SSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCC--CCCCccCCHHHHHHHHHHHccCCC
Confidence            467884  488888888888888888877653

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.57  E-value=2.3e-05  Score=52.66  Aligned_cols=27  Identities=30%  Similarity=0.437  Sum_probs=24.2

Q ss_pred             hcCCCCeecCccccccCChhHHHHHhh
Q psy1991         338 HTGDRPFQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       338 HtgeKpykC~~CgKsFs~kssLk~H~K  364 (366)
                      +.|++||+|+.|||+|.+++.|++|+.
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~p   29 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCC
Confidence            568999999999999999999999973

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.56  E-value=9.4e-05  Score=55.53  Aligned_cols=52  Identities=23%  Similarity=0.555  Sum_probs=46.7

Q ss_pred             eecCCCCCCCcccChHHHHHHh-hhhcCCC------CeecC--ccccccCChhHHHHHhhc
Q psy1991         314 YQCGWKGCGWKFARSDELTRHF-RKHTGDR------PFQCT--LCERAFSRSDHLSLHMKR  365 (366)
Q Consensus       314 f~C~i~~CgKsF~sk~~L~~H~-rtHtgeK------pykC~--~CgKsFs~kssLk~H~Kt  365 (366)
                      +.|.+..|++.|.+...|..|+ +.|.+.+      +|.|.  .|++.+.....|..|+++
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            5788899999999999999998 4798766      79996  899999999999999885

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.54  E-value=5.3e-05  Score=45.28  Aligned_cols=28  Identities=39%  Similarity=0.975  Sum_probs=23.4

Q ss_pred             CCceecCCCCCCCcccChHHHHHHhhhhcC
Q psy1991         311 EKPYQCGWKGCGWKFARSDELTRHFRKHTG  340 (366)
Q Consensus       311 eKpf~C~i~~CgKsF~sk~~L~~H~rtHtg  340 (366)
                      +++|.|.  .|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~--~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCS--VCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECS--SSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCC--CCCcccCCHHHHHHHHHhcCC
Confidence            4689994  499999999999999988864

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.54  E-value=7.3e-05  Score=56.71  Aligned_cols=37  Identities=30%  Similarity=0.594  Sum_probs=27.2

Q ss_pred             cccceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCC
Q psy1991         279 RKIIMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGW  318 (366)
Q Consensus       279 ~H~k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i  318 (366)
                      +..+.|.|..  |+|.|.++..|.+|+++|++++ ..+.+
T Consensus         9 ~~ekpy~C~~--CgK~F~~~s~L~~H~r~Htg~~-~~~~~   45 (66)
T 2epp_A            9 REAGILPCGL--CGKVFTDANRLRQHEAQHGVTS-LQLGY   45 (66)
T ss_dssp             CCCCCCCCTT--TCCCCSCHHHHHHHHHHHTTTS-CCCCS
T ss_pred             CCccCcCCCC--CCCccCCHHHHHhhhhhhCCCc-ccccc
Confidence            3456677776  9999998889999988888764 34533

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.53  E-value=3.8e-05  Score=46.43  Aligned_cols=25  Identities=48%  Similarity=0.925  Sum_probs=18.8

Q ss_pred             CCeecCccccccCChhHHHHH-hhcC
Q psy1991         342 RPFQCTLCERAFSRSDHLSLH-MKRH  366 (366)
Q Consensus       342 KpykC~~CgKsFs~kssLk~H-~KtH  366 (366)
                      ++|.|+.||+.|.+.+.|.+| +++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H   26 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIH   26 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTS
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHc
Confidence            467788888888888888888 5665

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.52  E-value=4.5e-05  Score=45.33  Aligned_cols=29  Identities=31%  Similarity=0.595  Sum_probs=22.2

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      ++|.|.  .|++.|.....|..|+++|++++
T Consensus         1 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCP--HCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCS--SCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCC--CCCcccCCHHHHHHHHHHhccCC
Confidence            467884  48888888888888888887764

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=97.51  E-value=2.4e-05  Score=57.00  Aligned_cols=44  Identities=14%  Similarity=0.366  Sum_probs=36.5

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHH
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELT  332 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~  332 (366)
                      +.+.|..  ||+.|.....|.   ++|.++++|.|.+  |++.|.....+.
T Consensus        13 k~~~C~~--C~k~F~~~~~l~---~~H~~~k~~~C~~--C~k~f~~~~~~~   56 (62)
T 1vd4_A           13 ASFKCPV--CSSTFTDLEANQ---LFDPMTGTFRCTF--CHTEVEEDESAM   56 (62)
T ss_dssp             SEEECSS--SCCEEEHHHHHH---HEETTTTEEBCSS--SCCBCEECTTCS
T ss_pred             CCccCCC--CCchhccHHHhH---hhcCCCCCEECCC--CCCccccCcccc
Confidence            4566766  999999988886   7899999999955  999998877654

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.50  E-value=3.8e-05  Score=45.92  Aligned_cols=25  Identities=32%  Similarity=0.622  Sum_probs=17.9

Q ss_pred             CCeecC--ccccccCChhHHHHHhhcC
Q psy1991         342 RPFQCT--LCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       342 KpykC~--~CgKsFs~kssLk~H~KtH  366 (366)
                      ++|.|+  .||+.|.+.+.|.+|+++|
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGG
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHh
Confidence            357777  7777777777777777765

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.50  E-value=5.2e-06  Score=52.25  Aligned_cols=25  Identities=44%  Similarity=0.800  Sum_probs=23.7

Q ss_pred             CCeecCccccccCChhHHHHHhhcC
Q psy1991         342 RPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       342 KpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +||+|+.||+.|.+++.|.+|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H   25 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTA   25 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHH
Confidence            5899999999999999999999987

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.59  E-value=1.7e-05  Score=47.86  Aligned_cols=29  Identities=45%  Similarity=0.901  Sum_probs=22.3

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      ++|.|.  .|++.|.....|..|+++|++++
T Consensus         1 k~~~C~--~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCV--MCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            467884  48888888888888888887653

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.58  E-value=1.8e-05  Score=47.78  Aligned_cols=30  Identities=47%  Similarity=0.873  Sum_probs=23.5

Q ss_pred             CCceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       311 eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      +++|.|.  .|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~--~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCI--HCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            3678884  48888888888888888887753

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.43  E-value=8.2e-05  Score=43.91  Aligned_cols=27  Identities=37%  Similarity=0.802  Sum_probs=20.6

Q ss_pred             ceecCCCCCCCcccChHHHHHHhhhhcCC
Q psy1991         313 PYQCGWKGCGWKFARSDELTRHFRKHTGD  341 (366)
Q Consensus       313 pf~C~i~~CgKsF~sk~~L~~H~rtHtge  341 (366)
                      +|.|.  .|++.|..+..|.+|+++|+++
T Consensus         1 ~~~C~--~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCG--LCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCS--SSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCC--CCCCcCCCHHHHHHHHHHcCCC
Confidence            47884  4888888888888888888763

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.43  E-value=8.7e-05  Score=44.12  Aligned_cols=27  Identities=33%  Similarity=0.701  Sum_probs=22.2

Q ss_pred             CCceecCCCCCCCcccChHHHHHHhhhhc
Q psy1991         311 EKPYQCGWKGCGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       311 eKpf~C~i~~CgKsF~sk~~L~~H~rtHt  339 (366)
                      +++|.|.  .|++.|.....|..|+++|+
T Consensus         1 ek~~~C~--~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCS--LCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECS--SSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCC--CcChhhCCHHHHHHHHHHcc
Confidence            4688994  49999999999999988874

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.37  E-value=8.2e-05  Score=44.58  Aligned_cols=27  Identities=26%  Similarity=0.566  Sum_probs=22.6

Q ss_pred             CCceecCCCCCCCcccChHHHHHHhhhhc
Q psy1991         311 EKPYQCGWKGCGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       311 eKpf~C~i~~CgKsF~sk~~L~~H~rtHt  339 (366)
                      +++|.|.  .|++.|..+..|.+|+++|+
T Consensus         1 ~k~~~C~--~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCP--LCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEET--TTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCC--CCCcccCCHHHHHHHHHhcC
Confidence            4689994  49999999999999998874

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.35  E-value=0.0001  Score=44.41  Aligned_cols=29  Identities=41%  Similarity=0.772  Sum_probs=23.2

Q ss_pred             CceecCCCCCCCcccChHHHHHH-hhhhcCCC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRH-FRKHTGDR  342 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H-~rtHtgeK  342 (366)
                      ++|.|  ..|++.|.....|..| +++|++++
T Consensus         1 k~~~C--~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYAC--GLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBC--TTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCC--cccCcccCChHHHHHHHHHHccCCC
Confidence            46888  4499999999999999 67888764

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.24  E-value=0.00017  Score=42.93  Aligned_cols=29  Identities=38%  Similarity=0.801  Sum_probs=20.8

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTG  340 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtg  340 (366)
                      ++|.|.++.|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            46778411588888888888888887764

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.07  E-value=0.0001  Score=43.42  Aligned_cols=26  Identities=46%  Similarity=1.029  Sum_probs=19.6

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhc
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHt  339 (366)
                      ++|.|.  .|++.|.....|..|+++|+
T Consensus         1 kp~~C~--~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCE--RCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            467884  48888888888888887763

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.66  E-value=0.0032  Score=53.72  Aligned_cols=27  Identities=30%  Similarity=0.586  Sum_probs=13.2

Q ss_pred             hcCCCCeecCccccccCChhHHHHHhh
Q psy1991         338 HTGDRPFQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       338 HtgeKpykC~~CgKsFs~kssLk~H~K  364 (366)
                      |+|+++|.|..|+|.|.+.+.|..|++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHh
Confidence            444444555555555555555554443

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.73  E-value=0.083  Score=45.73  Aligned_cols=75  Identities=21%  Similarity=0.457  Sum_probs=58.1

Q ss_pred             eeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhh
Q psy1991         285 TCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       285 ~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~K  364 (366)
                      .|...+|+.... ...|..|.+ .-.-++..|  +.|+..+ .+..|..|....-..+.-.|+.|+..+.. ..|..|..
T Consensus        84 ~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C--~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~  157 (170)
T 3hcs_A           84 KCPNEGCLHKME-LRHLEDHQA-HCEFALMDC--PQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQ  157 (170)
T ss_dssp             ECCSTTCCCEEE-GGGHHHHHT-TCTTSEEEC--TTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHT
T ss_pred             CCCCCCCCceec-HhHHHHHHh-cCCceeeEC--CCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHH
Confidence            477678998776 457888874 334567899  5699988 66779999987778888999999998755 57788876


Q ss_pred             c
Q psy1991         365 R  365 (366)
Q Consensus       365 t  365 (366)
                      .
T Consensus       158 ~  158 (170)
T 3hcs_A          158 N  158 (170)
T ss_dssp             T
T ss_pred             h
Confidence            5

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.34  E-value=0.036  Score=46.70  Aligned_cols=75  Identities=23%  Similarity=0.303  Sum_probs=49.7

Q ss_pred             eeeecCCCCCcccCchhHHHHH--HhhcCC-CceecCC----CCCCCcccChHHHHHHhhhhcCCCCeecCccccccCCh
Q psy1991         284 HTCSHNGCGKTYTKSSHLKAHL--RTHTGE-KPYQCGW----KGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRS  356 (366)
Q Consensus       284 H~C~~~~CgK~F~skssLk~H~--rtH~~e-Kpf~C~i----~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~k  356 (366)
                      ..|..  |+..|.+...+..|.  +.|... +.+.+..    +.=++.+....    +...+.+.+.|.|..|++.|...
T Consensus        33 ~~C~~--C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           33 TQCKV--CSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             SEETT--TTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSSH
T ss_pred             CcCcC--CCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCCH
Confidence            45777  999999999999998  456432 3333310    00023333211    22345667789999999999999


Q ss_pred             hHHHHHhh
Q psy1991         357 DHLSLHMK  364 (366)
Q Consensus       357 ssLk~H~K  364 (366)
                      ..|..|..
T Consensus       107 ~~~~~H~~  114 (127)
T 1zu1_A          107 VVAESHYI  114 (127)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHC
Confidence            99999974

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.64  E-value=0.057  Score=38.75  Aligned_cols=23  Identities=22%  Similarity=0.443  Sum_probs=14.2

Q ss_pred             CceecCCCCCCCcccChHHHHHHhh
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFR  336 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~r  336 (366)
                      .+|.|  +.|++.|.....|++||+
T Consensus        11 ~~~~C--PrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKIC--PRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCC--TTTCCCCSSHHHHHHHHH
T ss_pred             CceeC--CcccccccchHHHHhhhh
Confidence            34566  556666666666666665

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=90.68  E-value=0.068  Score=45.47  Aligned_cols=29  Identities=31%  Similarity=0.488  Sum_probs=25.2

Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhh
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRK  337 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rt  337 (366)
                      .|+|+++|.|.+  |++.|.+...|..|+++
T Consensus        44 d~tGekpfyC~~--C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLA--CARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETT--TTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEccc--CcchhCCHHHHHHHHhh
Confidence            478899999954  99999999999999874

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=82.00  E-value=1  Score=37.62  Aligned_cols=70  Identities=10%  Similarity=0.123  Sum_probs=47.0

Q ss_pred             ccccCCCCCccccchhhhccc--ceee-------eec----CCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccC
Q psy1991         261 TIKSSLLSKPKRRQNWSRRKI--IMHT-------CSH----NGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFAR  327 (366)
Q Consensus       261 ~~kC~~Csk~f~~k~~l~~H~--k~H~-------C~~----~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~s  327 (366)
                      .+.|..|...|.....+..|.  +.|.       +..    +.=++.+....    +...+.+.+.|-|.+  |++.|.+
T Consensus        32 ~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~--C~~~f~s  105 (127)
T 1zu1_A           32 DTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPV--CNMTFSS  105 (127)
T ss_dssp             SSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETT--TTEECSS
T ss_pred             CCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCC--CCCEeCC
Confidence            478999999999888888887  3332       211    00122332211    222355677899966  9999999


Q ss_pred             hHHHHHHhh
Q psy1991         328 SDELTRHFR  336 (366)
Q Consensus       328 k~~L~~H~r  336 (366)
                      ...+..|..
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            999999976

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	366
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	4e-11
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	3e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-09
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	5e-06
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-09
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	5e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.002
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	4e-09
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-07
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	7e-09
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-08
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.003
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	7e-09
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-07
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	6e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	8e-09
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-08
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	2e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-08
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-08
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	3e-08
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	5e-08
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	0.001
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-08
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-07
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	4e-08
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	8e-08
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	0.003
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	9e-08
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-04
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	9e-08
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	5e-07
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	1e-06
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	8e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	3e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	7e-05
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	4e-04
d1bhia_	38	g.37.1.1 (A:) Transactivation domain of cre-bp1/at	6e-04
d1bhia_	38	g.37.1.1 (A:) Transactivation domain of cre-bp1/at	0.001

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (133), Expect = 4e-11
 Identities = 11/35 (31%), Positives = 19/35 (54%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGW 318
            +C    CGK++    HLK H++ H+  + Y C +
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (112), Expect = 3e-08
 Identities = 9/33 (27%), Positives = 13/33 (39%)

Query: 314 YQCGWKGCGWKFARSDELTRHFRKHTGDRPFQC 346
           + C    CG  F     L  H + H+  R + C
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (122), Expect = 1e-09
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           +K Y C    CG  F    +  RH   H G RP+ C +C + F    HL  HMK H
Sbjct: 1   DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 5e-06
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKH 338
           CGK++T  S    H+  H G +PY CG   CG KF     L  H + H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH 53

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.9 bits (119), Expect = 3e-09
 Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 299 SHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDR 342
             +  +++    +K ++C + GC   F R   +  H + H  DR
Sbjct: 5   GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.3 bits (81), Expect = 5e-04
 Identities = 8/29 (27%), Positives = 18/29 (62%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEK 312
             C   GC KT+ +  ++++H++TH  ++
Sbjct: 19  FECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.4 bits (76), Expect = 0.002
 Identities = 8/36 (22%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 333 RHFRKHTGDRPFQCTLCE--RAFSRSDHLSLHMKRH 366
             + K   D+ F+C      + F R  ++  H++ H
Sbjct: 8   DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (118), Expect = 4e-09
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
                   + Y+C    CG  F+ S +L++H R HTG
Sbjct: 3   SEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (105), Expect = 2e-07
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           R   +    R ++C  C ++FS S  LS H + H
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (116), Expect = 7e-09
 Identities = 15/29 (51%), Positives = 20/29 (68%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEK 312
             C+ + CGK +T+S  L+ H RTHTGEK
Sbjct: 3   FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (112), Expect = 3e-08
 Identities = 17/31 (54%), Positives = 22/31 (70%)

Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDR 342
           +P+ C W  CG +F RSDEL RH R HTG++
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.003
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 342 RPFQCTL--CERAFSRSDHLSLHMKRH 366
           RPF CT   C + F+RSD L  H + H
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTH 27

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.5 bits (116), Expect = 7e-09
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
           ++PY C   GC   F R+ +L RH + H  
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.9 bits (104), Expect = 3e-07
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGE 311
           ++C H GC K + ++  L  H ++H  +
Sbjct: 4   YSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.6 bits (80), Expect = 6e-04
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 341 DRPFQCT--LCERAFSRSDHLSLHMKRH 366
           DRP+ C    C++AF R+  L  H K H
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSH 28

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (116), Expect = 8e-09
 Identities = 15/28 (53%), Positives = 21/28 (75%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGE 311
           H C+  GC K+Y++  +LK HLR+HTGE
Sbjct: 3   HKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (108), Expect = 1e-07
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGD 341
           KP++C ++GC   ++R + L  H R HTG+
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (113), Expect = 2e-08
 Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 308 HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
           H+GEKPY C    CG  F+RS  L +H R HTG
Sbjct: 2   HSGEKPYGCVE--CGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (105), Expect = 2e-07
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 338 HTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           H+G++P+ C  C +AFSRS  L  H + H
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (91), Expect = 2e-05
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGE 311
           + C    CGK +++SS L  H R HTGE
Sbjct: 8   YGCVE--CGKAFSRSSILVQHQRVHTGE 33

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (113), Expect = 2e-08
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 306 RTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGD 341
           RTH+GEKPY+C    C  +F +S  +  H  +   +
Sbjct: 1   RTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTE 34

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (111), Expect = 4e-08
 Identities = 9/31 (29%), Positives = 21/31 (67%)

Query: 336 RKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           R H+G++P++C +C   F++S  + +H+ + 
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQK 31

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (112), Expect = 3e-08
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHT 339
           +PY C + GC  KFA+S  L  H   H 
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (110), Expect = 5e-08
 Identities = 10/26 (38%), Positives = 18/26 (69%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHT 309
           + C  +GC K + +S++LK+H+ TH 
Sbjct: 3   YVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 0.001
 Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 342 RPFQCTL--CERAFSRSDHLSLHMKRH 366
           RP+ C    C + F++S +L  H+  H
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTH 27

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.0 bits (112), Expect = 3e-08
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
             R  TG KP+QC    C   F+RSD L  H ++H  
Sbjct: 2   STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.5 bits (108), Expect = 1e-07
 Identities = 21/33 (63%), Positives = 25/33 (75%)

Query: 334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
             R  TG +PFQC  C+R+FSRSDHL+LH KRH
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.5 bits (111), Expect = 4e-08
 Identities = 15/29 (51%), Positives = 20/29 (68%)

Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTG 340
           +PY C  + C  +F+RS +LTRH R HTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.8 bits (109), Expect = 8e-08
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTG 310
           + C    C + +++S+ L  H+R HTG
Sbjct: 3   YACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.3 bits (74), Expect = 0.003
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)

Query: 342 RPFQCT--LCERAFSRSDHLSLHMKRH 366
           RP+ C    C+R FSRS  L+ H++ H
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIH 27

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (110), Expect = 5e-08
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 306 RTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
           RTHTGEKPY C    C   F +   L  HF+++  
Sbjct: 1   RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (105), Expect = 3e-07
 Identities = 12/31 (38%), Positives = 21/31 (67%)

Query: 336 RKHTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           R HTG++P+ C+ C++ F +   L +H KR+
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 31

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.003
 Identities = 5/24 (20%), Positives = 10/24 (41%)

Query: 289 NGCGKTYTKSSHLKAHLRTHTGEK 312
           + C KT+ +   L  H + +    
Sbjct: 12  SHCDKTFRQKQLLDMHFKRYHDPN 35

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (109), Expect = 9e-08
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLR-THTGEKPYQC 316
           + C    CGK +++  HL  H++  HT E+P++C
Sbjct: 6   YICQS--CGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (108), Expect = 1e-07
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)

Query: 309 TGEKPYQCGWKGCGWKFARSDELTRHFRK-HTGDRPFQCTL 348
           +  KPY C    CG  F+R D L  H ++ HT +RP +C +
Sbjct: 1   SVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 1e-04
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 339 TGDRPFQCTLCERAFSRSDHLSLHMKRH 366
           +  +P+ C  C + FSR DHL+ H+K+ 
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQV 28

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (108), Expect = 9e-08
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGE 311
             C+  GCGK ++   +L+ H+R HTG+
Sbjct: 3   FQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (103), Expect = 5e-07
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGD 341
           KP+QC ++GCG +F+    L  H R HTGD
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 42.2 bits (100), Expect = 1e-06
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEK 312
             C    C + + +  HLK H R+HT EK
Sbjct: 3   FVCEV--CTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 38.8 bits (91), Expect = 2e-05
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDR 342
           + + C    C   FAR + L RH+R HT ++
Sbjct: 1   RSFVCEV--CTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 37.2 bits (87), Expect = 8e-05
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 342 RPFQCTLCERAFSRSDHLSLHMKRH 366
           R F C +C RAF+R +HL  H + H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.7 bits (93), Expect = 1e-05
 Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 2/33 (6%)

Query: 308 HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
            +G++P+    + C   F       RH + HT 
Sbjct: 2   SSGKRPFV--CRICLSAFTTKANCARHLKVHTD 32

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.6 bits (90), Expect = 3e-05
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 338 HTGDRPFQCTLCERAFSRSDHLSLHMKRH 366
            +G RPF C +C  AF+   + + H+K H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.5 bits (93), Expect = 1e-05
 Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 2/30 (6%)

Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKHTG 340
           +KP+QC  + C   F+RSD LT H R HTG
Sbjct: 1   QKPFQC--RICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 284 HTCSHNGCGKTYTKSSHLKAHLRTHTG 310
             C    C + +++S HL  H+RTHTG
Sbjct: 4   FQCRI--CMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.4 bits (85), Expect = 1e-04
 Identities = 15/25 (60%), Positives = 20/25 (80%)

Query: 342 RPFQCTLCERAFSRSDHLSLHMKRH 366
           +PFQC +C R FSRSDHL+ H++ H
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTH 26

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (92), Expect = 2e-05
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 291 CGKTYTKSSHLKAHLRTHTGEK 312
           C K + +S HL  H++TH  +K
Sbjct: 8   CPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (91), Expect = 2e-05
 Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDR 342
           K + C    C  +F RSD L++H + H   +
Sbjct: 1   KKFACPE--CPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 0.001
 Identities = 13/25 (52%), Positives = 16/25 (64%)

Query: 342 RPFQCTLCERAFSRSDHLSLHMKRH 366
           + F C  C + F RSDHLS H+K H
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTH 25

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.1 bits (86), Expect = 7e-05
 Identities = 16/28 (57%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKH 338
           EKP+ C    CG KFARSDE  RH + H
Sbjct: 1   EKPFAC--DICGRKFARSDERKRHTKIH 26

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.2 bits (81), Expect = 4e-04
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 341 DRPFQCTLCERAFSRSDHLSLHMKRH 366
           ++PF C +C R F+RSD    H K H
Sbjct: 1   EKPFACDICGRKFARSDERKRHTKIH 26

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (80), Expect = 6e-04
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 311 EKPYQCGWKGCGWKFARSDELTRHFRKHT 339
           +KP+ C   GCG +F   D L  H  KH 
Sbjct: 4   DKPFLCTAPGCGQRFTNEDHLAVHKHKHE 32

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (78), Expect = 0.001
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 341 DRPFQCTL--CERAFSRSDHLSLHMKRH 366
           D+PF CT   C + F+  DHL++H  +H
Sbjct: 4   DKPFLCTAPGCGQRFTNEDHLAVHKHKH 31

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	366
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.54
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.21
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.99
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.91
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.87
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.8
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.79
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.78
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.78
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.76
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.76
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.73
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.67
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.64
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.58
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.57
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.56
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.56
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.52
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.48
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.48
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.45
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.42
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.4
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.38
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.37
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.37
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.35
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.34
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.31
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.29
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.27
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.21
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.16
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.15
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.15
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.08
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.99
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.99
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.88
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.82
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.66
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.33
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.21
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.17
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.08
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.01
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.91
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.65
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.52
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.47
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.44
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.38
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.37
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.34
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.29
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.28
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.26
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.21
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.17
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.15
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.13
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.08
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	95.89
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.31
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	95.2
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	95.19
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.19
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	95.19
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	94.94
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	94.93
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	94.86
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	94.7
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.56
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.52
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	94.43
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.04
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	93.62
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.37
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	93.31
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.09
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.96
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	92.84
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	92.3
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	91.83
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	91.72
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.7
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	91.64
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	91.54
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.08
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.88
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	90.51
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	89.09
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	88.45
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	88.24
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	88.23
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	88.13
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	87.53
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	86.43
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	85.26
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	85.0
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	84.42
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	83.93
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	81.02

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=2.1e-15  Score=108.40  Aligned_cols=53  Identities=40%  Similarity=0.845  Sum_probs=51.2

Q ss_pred             CCceecCCCCCCCcccChHHHHHHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       311 eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ||+|.|  + ||+.|..+..|.+|+++|+|++||.|.+||++|.+.+.|.+|+++|
T Consensus         1 EK~y~C--~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC--Q-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC--T-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC--C-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            689999  5 9999999999999999999999999999999999999999999998

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=4.8e-12  Score=90.48  Aligned_cols=52  Identities=37%  Similarity=0.801  Sum_probs=48.4

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhh
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKH  338 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtH  338 (366)
                      +.+.| .  ||+.|..+..|..|+++|++++||.|  ..||+.|.....|.+|+++|
T Consensus         2 K~y~C-~--Cgk~F~~~~~l~~H~~~Ht~ekpy~C--~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGC--GVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEEC--TTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCC-C--CCCeECCHHHhHHHhhccccccCCcC--CCcCCEecCHHHHHHHHhcC
Confidence            56778 4  99999999999999999999999999  55999999999999999987

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.99  E-value=4.6e-11  Score=80.18  Aligned_cols=33  Identities=64%  Similarity=1.090  Sum_probs=25.5

Q ss_pred             HhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         334 HFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       334 H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |.|+|+|||||+|++||++|.++++|++|+++|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            567777777777777777777777777777776

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=1.2e-10  Score=78.49  Aligned_cols=36  Identities=33%  Similarity=0.747  Sum_probs=18.8

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCC
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGD  341 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtge  341 (366)
                      |+++|+++|||.|  +.|||+|...+.|.+|+++|+||
T Consensus         3 H~~~Ht~ekpy~C--~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBC--SSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEec--CCCCceeeCHHHHHHhCccCCCC
Confidence            4445555555555  23555555555555555555543

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=3.6e-10  Score=75.28  Aligned_cols=34  Identities=44%  Similarity=0.850  Sum_probs=19.9

Q ss_pred             HhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCC
Q psy1991         306 RTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGD  341 (366)
Q Consensus       306 rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtge  341 (366)
                      |+|+|+|||+|.  .||++|..+..|.+|+++|+++
T Consensus         1 R~HTgekPy~C~--~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECS--SSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECC--CCCCCcCCHhHHHHhCcccCCC
Confidence            346666666663  3666666666666666666543

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.4e-09  Score=73.67  Aligned_cols=37  Identities=43%  Similarity=0.971  Sum_probs=33.0

Q ss_pred             CCCceecCCCCCCCcccChHHHHHHhh-hhcCCCCeecCc
Q psy1991         310 GEKPYQCGWKGCGWKFARSDELTRHFR-KHTGDRPFQCTL  348 (366)
Q Consensus       310 ~eKpf~C~i~~CgKsF~sk~~L~~H~r-tHtgeKpykC~~  348 (366)
                      -+|||+|  +.|||.|....+|.+|++ +|+|+|||+|++
T Consensus         2 ~~Kpy~C--~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEEC--SSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccC--CCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4789999  559999999999999976 799999999975

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.79  E-value=1e-09  Score=72.80  Aligned_cols=31  Identities=29%  Similarity=0.695  Sum_probs=18.0

Q ss_pred             hcCCCceecCCCCCCCcccChHHHHHHhhhhcC
Q psy1991         308 HTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG  340 (366)
Q Consensus       308 H~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtg  340 (366)
                      |+|+|||+|.+  |+|.|.++.+|++|+++|++
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHccccCC
Confidence            45566666633  66666666666666666654

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.1e-09  Score=71.70  Aligned_cols=33  Identities=55%  Similarity=1.013  Sum_probs=21.7

Q ss_pred             hhcCCCceecCCCCCCCcccChHHHHHHhhhhcCC
Q psy1991         307 THTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGD  341 (366)
Q Consensus       307 tH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtge  341 (366)
                      +|+++|||+|  ..|||+|..+..|.+|+++|+||
T Consensus         1 IHTgekpy~C--~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGC--VECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEEC--SSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeC--CCCCCEeCchHHhHhhccccCCC
Confidence            3666667777  33777777777777777666664

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.5e-09  Score=72.39  Aligned_cols=34  Identities=26%  Similarity=0.676  Sum_probs=23.4

Q ss_pred             eecCCCCCCCcccChHHHHHHhhhhcCCCCeecC
Q psy1991         314 YQCGWKGCGWKFARSDELTRHFRKHTGDRPFQCT  347 (366)
Q Consensus       314 f~C~i~~CgKsF~sk~~L~~H~rtHtgeKpykC~  347 (366)
                      |.|++++|++.|.++..|++|+++|+|+|||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            5666666777777777777777777777777665

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.76  E-value=4.7e-10  Score=78.98  Aligned_cols=43  Identities=23%  Similarity=0.571  Sum_probs=37.0

Q ss_pred             hhHHHHHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         299 SHLKAHLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       299 ssLk~H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      ..|..|++ |++++||+|.+++|+|+|.++..|++|+++|+|||
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            45667774 89999999977779999999999999999999985

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=5.8e-10  Score=75.07  Aligned_cols=34  Identities=32%  Similarity=0.626  Sum_probs=32.8

Q ss_pred             HHhhhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         333 RHFRKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       333 ~H~rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+++|+++|||+|++|||+|.+.++|.+|+++|
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~H   35 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH   35 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTT
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccC
Confidence            5889999999999999999999999999999998

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=1.2e-09  Score=72.69  Aligned_cols=27  Identities=30%  Similarity=1.027  Sum_probs=13.2

Q ss_pred             hhcCCCCeecCccccccCChhHHHHHh
Q psy1991         337 KHTGDRPFQCTLCERAFSRSDHLSLHM  363 (366)
Q Consensus       337 tHtgeKpykC~~CgKsFs~kssLk~H~  363 (366)
                      +|+|||||+|++||++|+++++|++|+
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~   28 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHI   28 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHc
Confidence            344444444444444444444444443

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=3.9e-09  Score=70.29  Aligned_cols=34  Identities=32%  Similarity=0.863  Sum_probs=32.4

Q ss_pred             eeeecCCCCCcccCchhHHHHHHhhcCCCceecC
Q psy1991         284 HTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQCG  317 (366)
Q Consensus       284 H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~C~  317 (366)
                      +.|++++||++|.++..|++|+++|+++|||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            6799999999999999999999999999999995

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=8.1e-09  Score=67.45  Aligned_cols=30  Identities=43%  Similarity=0.901  Sum_probs=28.9

Q ss_pred             hhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         337 KHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       337 tHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+|+|||+|.+|||+|.+++.|.+|+++|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~H   30 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVH   30 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGG
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhcccc
Confidence            599999999999999999999999999998

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=1.4e-08  Score=65.36  Aligned_cols=31  Identities=55%  Similarity=1.202  Sum_probs=26.0

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      |||.|++++|+|+|.+..+|.+|+++|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            5788887788888888888888888888875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.57  E-value=8.2e-09  Score=68.91  Aligned_cols=35  Identities=43%  Similarity=0.759  Sum_probs=32.2

Q ss_pred             HHHhhcCCCceecCCCCCCCcccChHHHHHHhhhhcC
Q psy1991         304 HLRTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTG  340 (366)
Q Consensus       304 H~rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtg  340 (366)
                      |.|+|+++|||+|  +.|+++|.++..|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C--~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQC--PDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCC--TTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEe--CCCCCEecCHHHHHHHHhcCcC
Confidence            6789999999999  5599999999999999999975

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.56  E-value=8.3e-09  Score=65.06  Aligned_cols=26  Identities=58%  Similarity=1.241  Sum_probs=21.4

Q ss_pred             CCCeecCccccccCChhHHHHHhhcC
Q psy1991         341 DRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       341 eKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ||||+|++|||+|++++.|.+|+++|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~H   26 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTH   26 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCc
Confidence            57888888888888888888888876

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.6e-08  Score=67.05  Aligned_cols=31  Identities=39%  Similarity=1.014  Sum_probs=29.9

Q ss_pred             hhhcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         336 RKHTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       336 rtHtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |+|+|||||+|.+||++|.+++.|++|+++|
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H   31 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY   31 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCccc
Confidence            6899999999999999999999999999987

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=2.4e-08  Score=63.85  Aligned_cols=30  Identities=50%  Similarity=1.028  Sum_probs=24.1

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcCC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTGD  341 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtge  341 (366)
                      |||.|++++|+|+|.++..|++|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            578887777888888888888888888875

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=3.4e-08  Score=63.11  Aligned_cols=30  Identities=40%  Similarity=0.954  Sum_probs=23.1

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcCC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTGD  341 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtge  341 (366)
                      |||+|++++|+|+|.++..|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            577787777888888888888888888775

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.48  E-value=4.3e-08  Score=64.74  Aligned_cols=29  Identities=38%  Similarity=0.849  Sum_probs=28.1

Q ss_pred             hcCCCCeecCccccccCChhHHHHHhhcC
Q psy1991         338 HTGDRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       338 HtgeKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |+|||||+|++|+|.|.++++|++|+++|
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~H   30 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVH   30 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGG
T ss_pred             CCCCccccCCCCCCcccChHHHHHHcccc
Confidence            78999999999999999999999999998

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.45  E-value=4.4e-08  Score=62.06  Aligned_cols=29  Identities=38%  Similarity=0.914  Sum_probs=23.8

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      |||+|.+  |+|.|.++..|.+|+++|+|||
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCC--CCCCCCCchHcccccCcccCCC
Confidence            5788854  8888888888888888888875

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=3.1e-08  Score=61.34  Aligned_cols=25  Identities=36%  Similarity=0.817  Sum_probs=20.4

Q ss_pred             CCeecCccccccCChhHHHHHhhcC
Q psy1991         342 RPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       342 KpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |||+|++|||+|.+++.|.+|+|+|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            5788888888888888888888876

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.40  E-value=8.9e-09  Score=72.29  Aligned_cols=37  Identities=22%  Similarity=0.667  Sum_probs=33.2

Q ss_pred             HHHHHHhhhhcCCCCeecCc--cccccCChhHHHHHhhcC
Q psy1991         329 DELTRHFRKHTGDRPFQCTL--CERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       329 ~~L~~H~rtHtgeKpykC~~--CgKsFs~kssLk~H~KtH  366 (366)
                      ..|.+|++ |+|++||+|.+  |||+|.+++.|++|+++|
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~H   43 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTH   43 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHH
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccc
Confidence            45667775 99999999987  999999999999999987

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=7.1e-08  Score=63.94  Aligned_cols=34  Identities=38%  Similarity=0.792  Sum_probs=29.1

Q ss_pred             HhhcCCCceecCCCCCCCcccChHHHHHHhhhhcCC
Q psy1991         306 RTHTGEKPYQCGWKGCGWKFARSDELTRHFRKHTGD  341 (366)
Q Consensus       306 rtH~~eKpf~C~i~~CgKsF~sk~~L~~H~rtHtge  341 (366)
                      |+|+|+|||+|++  |++.|.++.+|++|++.++++
T Consensus         1 R~HTgekP~~C~~--C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCC--CcccccchHHHHHHcccccCC
Confidence            4799999999955  999999999999998765443

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=8e-08  Score=64.84  Aligned_cols=36  Identities=33%  Similarity=0.767  Sum_probs=31.7

Q ss_pred             cceeeeecCCCCCcccCchhHHHHHH-hhcCCCceecCC
Q psy1991         281 IIMHTCSHNGCGKTYTKSSHLKAHLR-THTGEKPYQCGW  318 (366)
Q Consensus       281 ~k~H~C~~~~CgK~F~skssLk~H~r-tH~~eKpf~C~i  318 (366)
                      .+.|.|..  |||.|.+..+|++|++ +|+++|||+|+|
T Consensus         3 ~Kpy~C~~--Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCC--CCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            35678888  9999999999999986 699999999954

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.37  E-value=7.6e-08  Score=60.96  Aligned_cols=25  Identities=48%  Similarity=1.068  Sum_probs=24.3

Q ss_pred             CCeecCccccccCChhHHHHHhhcC
Q psy1991         342 RPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       342 KpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |||+|++|||+|.+++.|++|+++|
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~H   25 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSH   25 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTT
T ss_pred             CcCCCCCCCCCCCCchHcccccCcc
Confidence            6999999999999999999999998

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1e-07  Score=60.34  Aligned_cols=29  Identities=34%  Similarity=0.783  Sum_probs=23.3

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      |||.|.+  |+|+|.+++.|.+|+++|+|||
T Consensus         1 Kpy~C~~--C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPE--CPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTT--TTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCc--CCCeecchHHhhhhcCccCCcC
Confidence            5788844  8888888888888888888875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.34  E-value=1.1e-07  Score=59.79  Aligned_cols=28  Identities=57%  Similarity=1.032  Sum_probs=25.4

Q ss_pred             CCceecCCCCCCCcccChHHHHHHhhhhcC
Q psy1991         311 EKPYQCGWKGCGWKFARSDELTRHFRKHTG  340 (366)
Q Consensus       311 eKpf~C~i~~CgKsF~sk~~L~~H~rtHtg  340 (366)
                      ||||+|.  .|+|.|.++..|.+|+++|+|
T Consensus         1 EKPy~C~--~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCR--ICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECT--TTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCC--CCcCEecccccccccCCCccC
Confidence            6899995  499999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=9.9e-08  Score=60.45  Aligned_cols=25  Identities=52%  Similarity=1.007  Sum_probs=24.2

Q ss_pred             CCeecCccccccCChhHHHHHhhcC
Q psy1991         342 RPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       342 KpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |||.|++|||+|.+++.|.+|+++|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~H   25 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTH   25 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGG
T ss_pred             CCEECCcCCCeecchHHhhhhcCcc
Confidence            6899999999999999999999998

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.29  E-value=1.5e-07  Score=59.56  Aligned_cols=29  Identities=52%  Similarity=1.066  Sum_probs=22.4

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTG  340 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtg  340 (366)
                      |||+|.+++|+|+|.+...|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            57778777788888888888888877765

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.27  E-value=2.6e-07  Score=59.74  Aligned_cols=30  Identities=37%  Similarity=0.890  Sum_probs=23.0

Q ss_pred             CCceecCCCCCCCcccChHHHHHHhhhhcC
Q psy1991         311 EKPYQCGWKGCGWKFARSDELTRHFRKHTG  340 (366)
Q Consensus       311 eKpf~C~i~~CgKsF~sk~~L~~H~rtHtg  340 (366)
                      ||||.|.+++|+|+|.+..+|++|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            567788777788888888888888877764

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=2.6e-07  Score=59.30  Aligned_cols=31  Identities=48%  Similarity=0.817  Sum_probs=28.6

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCC
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEK  312 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eK  312 (366)
                      +.+.|++++|||.|.+..+|++|+++|+|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            3578999999999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=3.9e-07  Score=58.05  Aligned_cols=30  Identities=37%  Similarity=0.858  Sum_probs=27.9

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCC
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGE  311 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~e  311 (366)
                      +.|.|..++|||+|.+...|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            467899999999999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=3.1e-07  Score=57.67  Aligned_cols=28  Identities=43%  Similarity=0.930  Sum_probs=16.3

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhc
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHt  339 (366)
                      |||.|++++|+|+|.+..+|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            3555655556666666666666665553

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=4.9e-07  Score=57.62  Aligned_cols=30  Identities=50%  Similarity=1.012  Sum_probs=27.8

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCC
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGE  311 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~e  311 (366)
                      +.|.|.+++|+|.|.+.+.|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            467899999999999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.08  E-value=6.6e-07  Score=57.80  Aligned_cols=26  Identities=46%  Similarity=0.989  Sum_probs=24.9

Q ss_pred             CCCeecCc--cccccCChhHHHHHhhcC
Q psy1991         341 DRPFQCTL--CERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       341 eKpykC~~--CgKsFs~kssLk~H~KtH  366 (366)
                      ||||.|+.  |||+|.+.++|++|+++|
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~H   28 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSH   28 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhc
Confidence            68999998  999999999999999998

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.99  E-value=1.3e-06  Score=53.91  Aligned_cols=26  Identities=46%  Similarity=0.988  Sum_probs=22.3

Q ss_pred             CCCeecCccccccCChhHHHHHhhcC
Q psy1991         341 DRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       341 eKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ||||.|++||+.|+++...++|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            57888888888888888888888877

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=1.5e-06  Score=53.61  Aligned_cols=26  Identities=46%  Similarity=0.914  Sum_probs=22.8

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhc
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHt  339 (366)
                      |||+|  ++|||.|..++.|.+|+|+|+
T Consensus         1 KPy~C--~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKC--LECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEEC--SSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccC--CCCcCeeccCcccccCccCCC
Confidence            68999  669999999999999999885

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.88  E-value=2e-06  Score=54.25  Aligned_cols=29  Identities=31%  Similarity=0.729  Sum_probs=26.9

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcC
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTG  310 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~  310 (366)
                      +.+.|..++|+|.|.+..+|++|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            46889999999999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=3.6e-06  Score=52.70  Aligned_cols=28  Identities=36%  Similarity=0.772  Sum_probs=25.8

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhc
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHT  309 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~  309 (366)
                      +.+.|..++|||.|.+..+|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4678999999999999999999999995

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.2e-05  Score=48.19  Aligned_cols=24  Identities=46%  Similarity=1.041  Sum_probs=19.6

Q ss_pred             CeecCccccccCChhHHHHHhhcC
Q psy1991         343 PFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       343 pykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |++|+.|+|.|+++..|+.|+|.|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~h   24 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCH   24 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGC
T ss_pred             CCccchhhhHhcchhHHHHHhhcc
Confidence            567888888888888888888876

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=5.4e-05  Score=45.32  Aligned_cols=26  Identities=50%  Similarity=0.949  Sum_probs=19.7

Q ss_pred             ceecCCCCCCCcccChHHHHHHhhhhcC
Q psy1991         313 PYQCGWKGCGWKFARSDELTRHFRKHTG  340 (366)
Q Consensus       313 pf~C~i~~CgKsF~sk~~L~~H~rtHtg  340 (366)
                      |++|++  |+|.|+++..|+.|+|.|+|
T Consensus         1 phkc~~--c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEV--CGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTT--TTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccch--hhhHhcchhHHHHHhhccCC
Confidence            457855  88888888888888887765

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00012  Score=45.58  Aligned_cols=29  Identities=31%  Similarity=0.788  Sum_probs=20.5

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTG  340 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtg  340 (366)
                      |||.|.+++|+|++...+.|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            46777777777777777777777776543

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.00012  Score=46.76  Aligned_cols=32  Identities=34%  Similarity=0.711  Sum_probs=25.9

Q ss_pred             CCceecCCCCCCCcccChHHHHHHhhhhcCCCCe
Q psy1991         311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGDRPF  344 (366)
Q Consensus       311 eKpf~C~i~~CgKsF~sk~~L~~H~rtHtgeKpy  344 (366)
                      .+...|++  |||.|.....|.+|...|++||||
T Consensus         3 rk~~~ce~--cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           3 RKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CCSEEETT--TTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             chhhhHHH--HHHHHHHHHHHHhhhcccCCCCCC
Confidence            35567844  888888888888888888888887

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.08  E-value=0.00018  Score=44.21  Aligned_cols=27  Identities=59%  Similarity=1.050  Sum_probs=24.8

Q ss_pred             CCceecCCCCCCCcccChHHHHHHhhhhc
Q psy1991         311 EKPYQCGWKGCGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       311 eKpf~C~i~~CgKsF~sk~~L~~H~rtHt  339 (366)
                      ++||.|.+  ||+.|.+....++|.++|.
T Consensus         1 EkPf~C~~--CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDI--CGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccch--hhhhhhcchhhhhhhhhcc
Confidence            68999966  9999999999999999985

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.00011  Score=45.97  Aligned_cols=26  Identities=35%  Similarity=0.998  Sum_probs=19.0

Q ss_pred             CCCeecCccccccCChhHHHHHhhcC
Q psy1991         341 DRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       341 eKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ||||.|++|+.+|+++..+..|.|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrsh   26 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSH   26 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHH
T ss_pred             CCCcccchHHHHhhccccceEeeecc
Confidence            46777777777777777777777654

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.91  E-value=0.00032  Score=42.96  Aligned_cols=27  Identities=37%  Similarity=0.837  Sum_probs=18.6

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhh
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKH  338 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtH  338 (366)
                      .||+|+.++|+++|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            466776667777777777777776665

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.65  E-value=0.00057  Score=42.04  Aligned_cols=30  Identities=43%  Similarity=0.799  Sum_probs=21.4

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcCC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTGD  341 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtge  341 (366)
                      +||.|..+.|+|.|.+-..|.+|..+|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            467777677777777777777777777664

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.52  E-value=0.00096  Score=40.49  Aligned_cols=26  Identities=42%  Similarity=0.748  Sum_probs=16.6

Q ss_pred             eecCCCCCCCcccChHHHHHHhhhhcCC
Q psy1991         314 YQCGWKGCGWKFARSDELTRHFRKHTGD  341 (366)
Q Consensus       314 f~C~i~~CgKsF~sk~~L~~H~rtHtge  341 (366)
                      +.|  .+|||.|...+.|++|..+|+||
T Consensus         3 hvc--~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVC--AECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EEC--TTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chH--HHHhHHHHHHHHHHHHhhcccCC
Confidence            456  45666666666666666666654

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.0007  Score=42.19  Aligned_cols=29  Identities=48%  Similarity=1.066  Sum_probs=25.2

Q ss_pred             CCceecCCCCCCCcccChHHHHHHhhhhcCC
Q psy1991         311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGD  341 (366)
Q Consensus       311 eKpf~C~i~~CgKsF~sk~~L~~H~rtHtge  341 (366)
                      ++||.|++  |..+|.++..+.-|.|.|.|.
T Consensus         1 ekp~~cpi--c~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccch--HHHHhhccccceEeeecccCc
Confidence            58899977  999999999999999998764

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.44  E-value=0.00078  Score=45.06  Aligned_cols=25  Identities=32%  Similarity=0.884  Sum_probs=20.6

Q ss_pred             cCCCCeecCccccccCChhHHHHHh
Q psy1991         339 TGDRPFQCTLCERAFSRSDHLSLHM  363 (366)
Q Consensus       339 tgeKpykC~~CgKsFs~kssLk~H~  363 (366)
                      +|-|||.|.+|+|+|-.+.++.+|.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhh
Confidence            4678888888888888888888885

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.0007  Score=42.41  Aligned_cols=28  Identities=36%  Similarity=0.866  Sum_probs=16.2

Q ss_pred             CceecCCCCCCCcccChHHHHHHh-hhhc
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHF-RKHT  339 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~-rtHt  339 (366)
                      |||.|.+++|.|.|...++-..|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            455665556666666666666664 5554

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.37  E-value=0.001  Score=39.36  Aligned_cols=23  Identities=43%  Similarity=0.924  Sum_probs=15.4

Q ss_pred             eecCccccccCChhHHHHHhhcC
Q psy1991         344 FQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       344 ykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |+|..|.++|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            46666666666666666666665

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.34  E-value=0.0012  Score=39.52  Aligned_cols=26  Identities=42%  Similarity=0.704  Sum_probs=21.1

Q ss_pred             ecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         315 QCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       315 ~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      +|  +.|.|.|.++..|+.|-|.|+||+
T Consensus         2 qc--p~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 EC--PTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CC--TTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cC--cchHHHHHHhHhhhhccccccCCC
Confidence            57  448888888888888888888875

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.00061  Score=43.35  Aligned_cols=31  Identities=42%  Similarity=0.862  Sum_probs=27.4

Q ss_pred             eeeeecCCCCCcccCchhHHHHHHhhcCCCcee
Q psy1991         283 MHTCSHNGCGKTYTKSSHLKAHLRTHTGEKPYQ  315 (366)
Q Consensus       283 ~H~C~~~~CgK~F~skssLk~H~rtH~~eKpf~  315 (366)
                      .+.|+.  |||.|.....|.+|...|++++||.
T Consensus         5 ~~~ce~--cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           5 QVACEI--CGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             SEEETT--TTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhHHH--HHHHHHHHHHHHhhhcccCCCCCCC
Confidence            345777  9999999999999999999999983

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.0015  Score=42.86  Aligned_cols=30  Identities=40%  Similarity=0.846  Sum_probs=25.7

Q ss_pred             CCCceecCCCCCCCcccChHHHHHHhhhhc
Q psy1991         310 GEKPYQCGWKGCGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       310 ~eKpf~C~i~~CgKsF~sk~~L~~H~rtHt  339 (366)
                      .+|||.|.+++|+.+|.+...|..|+..|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            478899988889999999999999988875

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.26  E-value=0.0012  Score=40.89  Aligned_cols=29  Identities=38%  Similarity=0.677  Sum_probs=25.6

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcC
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTG  310 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~  310 (366)
                      +.+.|..++|+|++...++|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            35779999999999999999999998654

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.0013  Score=42.19  Aligned_cols=29  Identities=38%  Similarity=0.905  Sum_probs=20.9

Q ss_pred             ceecCCCCCCC---cccChHHHHHHhhhhcCC
Q psy1991         313 PYQCGWKGCGW---KFARSDELTRHFRKHTGD  341 (366)
Q Consensus       313 pf~C~i~~CgK---sF~sk~~L~~H~rtHtge  341 (366)
                      .|.|.|.+|.+   .|..+..|..|+|+|+||
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            46677777754   477777888888888775

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.17  E-value=0.0018  Score=39.49  Aligned_cols=29  Identities=45%  Similarity=0.933  Sum_probs=21.7

Q ss_pred             CCceecCCCCCCCcccChHHHHHHhhhhcCC
Q psy1991         311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGD  341 (366)
Q Consensus       311 eKpf~C~i~~CgKsF~sk~~L~~H~rtHtge  341 (366)
                      ++||+|.+  |...-...+.|..|+|.|+|+
T Consensus         1 erpfkcql--csy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQI--CPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeee--cccccCCchheEEeeecccCc
Confidence            46788855  877777778888888887763

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.0015  Score=39.86  Aligned_cols=26  Identities=38%  Similarity=0.963  Sum_probs=24.7

Q ss_pred             CCCeecCccccccCChhHHHHHhhcC
Q psy1991         341 DRPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       341 eKpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      ++||+|..|...-...+.|..|+|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~h   26 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSH   26 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTC
T ss_pred             CCcceeeecccccCCchheEEeeecc
Confidence            68999999999999999999999988

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.13  E-value=0.0015  Score=39.87  Aligned_cols=26  Identities=38%  Similarity=0.788  Sum_probs=24.4

Q ss_pred             eeeeecCCCCCcccCchhHHHHHHhh
Q psy1991         283 MHTCSHNGCGKTYTKSSHLKAHLRTH  308 (366)
Q Consensus       283 ~H~C~~~~CgK~F~skssLk~H~rtH  308 (366)
                      .+.|++++|++.|...+.|++|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            57899999999999999999999988

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.0016  Score=39.47  Aligned_cols=25  Identities=32%  Similarity=0.812  Sum_probs=20.0

Q ss_pred             CCeecCccccccCChhHHHHHhhcC
Q psy1991         342 RPFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       342 KpykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      |||+|..|+..-...++|+.|+|+|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            6788888888888888888888776

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.89  E-value=0.0016  Score=39.46  Aligned_cols=27  Identities=52%  Similarity=1.003  Sum_probs=23.9

Q ss_pred             eeeeecCCCCCcccCchhHHHHHHhhcCC
Q psy1991         283 MHTCSHNGCGKTYTKSSHLKAHLRTHTGE  311 (366)
Q Consensus       283 ~H~C~~~~CgK~F~skssLk~H~rtH~~e  311 (366)
                      .|.|..  |||.|...+.|++|+.+|+++
T Consensus         2 ~hvc~e--cgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAE--CGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTT--TCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHH--HhHHHHHHHHHHHHhhcccCC
Confidence            466777  999999999999999999885

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.31  E-value=0.0052  Score=37.64  Aligned_cols=29  Identities=45%  Similarity=0.778  Sum_probs=26.4

Q ss_pred             eeeeecCCCCCcccCchhHHHHHHhhcCC
Q psy1991         283 MHTCSHNGCGKTYTKSSHLKAHLRTHTGE  311 (366)
Q Consensus       283 ~H~C~~~~CgK~F~skssLk~H~rtH~~e  311 (366)
                      .+.|..++|.|.|.+...|.+|..+|+|+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            46799999999999999999999999875

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.20  E-value=0.0072  Score=36.82  Aligned_cols=27  Identities=37%  Similarity=0.799  Sum_probs=18.7

Q ss_pred             eecCCCCCCCcccChHHHHHHhhhhcCCC
Q psy1991         314 YQCGWKGCGWKFARSDELTRHFRKHTGDR  342 (366)
Q Consensus       314 f~C~i~~CgKsF~sk~~L~~H~rtHtgeK  342 (366)
                      |.|  +.|+.....++-|+.|+|.|++++
T Consensus         2 YvC--~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YIC--EECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBC--TTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccc--cccCcccCCHHHHHHHHHHhcCCC
Confidence            567  337777777777777777777654

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=95.19  E-value=0.0068  Score=35.72  Aligned_cols=24  Identities=42%  Similarity=0.926  Sum_probs=19.9

Q ss_pred             eecCCCCCCCcccChHHHHHHhhhhc
Q psy1991         314 YQCGWKGCGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       314 f~C~i~~CgKsF~sk~~L~~H~rtHt  339 (366)
                      |+|.+  |.++|..++.|.+|+|+|.
T Consensus         1 ykcgl--cersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGL--CERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGTC
T ss_pred             Ccccc--hHHHHHHHHHHHHHHHhhc
Confidence            57855  8999999999999988885

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.19  E-value=0.005  Score=38.44  Aligned_cols=30  Identities=37%  Similarity=0.720  Sum_probs=25.9

Q ss_pred             ceeeeecCCCCCcccCchhHHHHH-HhhcCC
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHL-RTHTGE  311 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~-rtH~~e  311 (366)
                      +.+.|+.++|.|.|.+.+.-..|+ |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            357899999999999999999997 778653

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.19  E-value=0.0053  Score=40.21  Aligned_cols=25  Identities=28%  Similarity=0.783  Sum_probs=13.5

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhh
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKH  338 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtH  338 (366)
                      +.|.|.+  |++.|.+..+|--||+.|
T Consensus         4 r~~~C~~--C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           4 RSYTCSF--CKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             SSEECTT--TCCEESSHHHHHHHHHTT
T ss_pred             CccCCCC--CCCccCCcccccchHhhh
Confidence            3455533  555555555555555544

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=94.94  E-value=0.0058  Score=38.11  Aligned_cols=22  Identities=50%  Similarity=1.044  Sum_probs=17.5

Q ss_pred             CeecCccccccCChhHHHHHhh
Q psy1991         343 PFQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       343 pykC~~CgKsFs~kssLk~H~K  364 (366)
                      ||.|.+|++.|+++..|.+|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            6788888888888888888853

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.93  E-value=0.0069  Score=36.90  Aligned_cols=24  Identities=21%  Similarity=0.528  Sum_probs=22.6

Q ss_pred             CeecCccccccCChhHHHHHhhcC
Q psy1991         343 PFQCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       343 pykC~~CgKsFs~kssLk~H~KtH  366 (366)
                      .|.|+.||...+..+.|+.|+|+|
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsH   24 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTH   24 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHT
T ss_pred             CccccccCcccCCHHHHHHHHHHh
Confidence            388999999999999999999988

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.86  E-value=0.011  Score=38.63  Aligned_cols=29  Identities=24%  Similarity=0.590  Sum_probs=19.0

Q ss_pred             ceeeeecCCCCCcccCchhHHHHHHhhcCCC
Q psy1991         282 IMHTCSHNGCGKTYTKSSHLKAHLRTHTGEK  312 (366)
Q Consensus       282 k~H~C~~~~CgK~F~skssLk~H~rtH~~eK  312 (366)
                      +.|.|..  |++.|.+-.+|--||+.|..++
T Consensus         4 r~~~C~~--C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSF--CKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTT--TCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCC--CCCccCCcccccchHhhhcchH
Confidence            3455666  7777777777777777775543

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.70  E-value=0.0079  Score=36.70  Aligned_cols=22  Identities=41%  Similarity=0.960  Sum_probs=16.4

Q ss_pred             CeecCccccccCChhHHHHHhh
Q psy1991         343 PFQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       343 pykC~~CgKsFs~kssLk~H~K  364 (366)
                      ||.|..|+..|+++.+|..||+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            5777777777777777777775

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.56  E-value=0.0076  Score=38.47  Aligned_cols=29  Identities=34%  Similarity=0.762  Sum_probs=25.1

Q ss_pred             eeeeecCCCC---CcccCchhHHHHHHhhcCC
Q psy1991         283 MHTCSHNGCG---KTYTKSSHLKAHLRTHTGE  311 (366)
Q Consensus       283 ~H~C~~~~Cg---K~F~skssLk~H~rtH~~e  311 (366)
                      .+.|.+.+|.   +.|+.+..|..|||+|+||
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            4679999995   5699999999999999986

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.52  E-value=0.017  Score=35.21  Aligned_cols=29  Identities=38%  Similarity=0.697  Sum_probs=19.2

Q ss_pred             CCceecCCCCCCCcccChHHHHHHhhhhcCC
Q psy1991         311 EKPYQCGWKGCGWKFARSDELTRHFRKHTGD  341 (366)
Q Consensus       311 eKpf~C~i~~CgKsF~sk~~L~~H~rtHtge  341 (366)
                      +..|.|.+  |...|+++-.|+.||..|+|+
T Consensus         2 eqvftcs~--cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSV--CQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSS--SCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHH--HHHHHHHHHhheeeeecccCC
Confidence            34566755  777777777777777777664

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.43  E-value=0.0083  Score=39.23  Aligned_cols=27  Identities=44%  Similarity=1.053  Sum_probs=24.2

Q ss_pred             CCCCeecCc--cccccCChhHHHHHhhcC
Q psy1991         340 GDRPFQCTL--CERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       340 geKpykC~~--CgKsFs~kssLk~H~KtH  366 (366)
                      .+|||.|..  |+.+|.+...|..|++.|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            489999954  999999999999999876

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.04  E-value=0.015  Score=34.73  Aligned_cols=24  Identities=46%  Similarity=0.671  Sum_probs=21.9

Q ss_pred             CCCCCcccCchhHHHHHHhhcCCC
Q psy1991         289 NGCGKTYTKSSHLKAHLRTHTGEK  312 (366)
Q Consensus       289 ~~CgK~F~skssLk~H~rtH~~eK  312 (366)
                      +.|.|.|.++.-|+.|-|.|+|++
T Consensus         4 p~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           4 PTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             TTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cchHHHHHHhHhhhhccccccCCC
Confidence            449999999999999999999985

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.62  E-value=0.023  Score=37.74  Aligned_cols=26  Identities=42%  Similarity=0.893  Sum_probs=23.0

Q ss_pred             cCCCceecCCCCCCCcccChHHHHHHhh
Q psy1991         309 TGEKPYQCGWKGCGWKFARSDELTRHFR  336 (366)
Q Consensus       309 ~~eKpf~C~i~~CgKsF~sk~~L~~H~r  336 (366)
                      +|-|||.|.+  |+|.|.++..+.+|..
T Consensus         1 TGiKPYeC~~--C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNI--CAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSS--SCCEESCHHHHHHHHH
T ss_pred             CCCCceeccc--hhhhhhhHHHHHHhhh
Confidence            4779999966  9999999999999964

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.37  E-value=0.022  Score=34.73  Aligned_cols=23  Identities=43%  Similarity=0.870  Sum_probs=19.9

Q ss_pred             CCeecCccccccCChhHHHHHhh
Q psy1991         342 RPFQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       342 KpykC~~CgKsFs~kssLk~H~K  364 (366)
                      +||+|+.|...-++.++|..|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHH
Confidence            58899999888889999998876

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.31  E-value=0.022  Score=34.90  Aligned_cols=24  Identities=33%  Similarity=0.689  Sum_probs=19.2

Q ss_pred             CCeecCccccccCChhHHHHHhhc
Q psy1991         342 RPFQCTLCERAFSRSDHLSLHMKR  365 (366)
Q Consensus       342 KpykC~~CgKsFs~kssLk~H~Kt  365 (366)
                      +||+|..|..+-+..++|+.|+++
T Consensus         1 kpy~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhc
Confidence            578888888888888888888764

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.09  E-value=0.025  Score=33.91  Aligned_cols=22  Identities=32%  Similarity=0.809  Sum_probs=15.4

Q ss_pred             CeecCccccccCChhHHHHHhh
Q psy1991         343 PFQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       343 pykC~~CgKsFs~kssLk~H~K  364 (366)
                      ||+|..|||.+-++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5677777777777777777754

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.96  E-value=0.032  Score=33.36  Aligned_cols=26  Identities=35%  Similarity=0.765  Sum_probs=15.9

Q ss_pred             eecCCCCCCCcccChHHHHHHhhhhc
Q psy1991         314 YQCGWKGCGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       314 f~C~i~~CgKsF~sk~~L~~H~rtHt  339 (366)
                      |.|.++.|+|.|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            45655666666666666666665553

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=92.84  E-value=0.031  Score=34.74  Aligned_cols=26  Identities=50%  Similarity=1.048  Sum_probs=21.8

Q ss_pred             ceecCCCCCCCcccChHHHHHHhh-hhcC
Q psy1991         313 PYQCGWKGCGWKFARSDELTRHFR-KHTG  340 (366)
Q Consensus       313 pf~C~i~~CgKsF~sk~~L~~H~r-tHtg  340 (366)
                      ||.|.+  |++.|+++.-|.+|.. .|.|
T Consensus         1 Pf~C~~--C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGL--CNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHTTTSCC
T ss_pred             Cccccc--ccchhhHHHHHHHHHHHHhcC
Confidence            689966  9999999999999965 4655

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.30  E-value=0.043  Score=33.35  Aligned_cols=27  Identities=41%  Similarity=0.849  Sum_probs=23.8

Q ss_pred             eeeeecCCCCCcccCchhHHHHHHhhcCC
Q psy1991         283 MHTCSHNGCGKTYTKSSHLKAHLRTHTGE  311 (366)
Q Consensus       283 ~H~C~~~~CgK~F~skssLk~H~rtH~~e  311 (366)
                      .+.|..  |...|+++-.|+.||-.|+|+
T Consensus         4 vftcs~--cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSV--CQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSS--SCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHH--HHHHHHHHHhheeeeecccCC
Confidence            456777  999999999999999999885

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.83  E-value=0.044  Score=32.15  Aligned_cols=21  Identities=33%  Similarity=0.929  Sum_probs=17.1

Q ss_pred             CeecCccccccCChhHHHHHh
Q psy1991         343 PFQCTLCERAFSRSDHLSLHM  363 (366)
Q Consensus       343 pykC~~CgKsFs~kssLk~H~  363 (366)
                      ||+|..|...|.++..|..||
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            678888888888888888886

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.72  E-value=0.07  Score=32.02  Aligned_cols=26  Identities=42%  Similarity=0.901  Sum_probs=21.7

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhc
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHt  339 (366)
                      +||+|..  |+..-...+.|..|+|.|.
T Consensus         2 kp~kck~--cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKT--CDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSS--SCCEESSHHHHHHHHHHSC
T ss_pred             CCccccc--ccchhcchhhHhhhhhccc
Confidence            6888944  9988888889999988885

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.70  E-value=0.051  Score=33.56  Aligned_cols=28  Identities=46%  Similarity=0.831  Sum_probs=13.7

Q ss_pred             eeeeecCCCCCcccCchhHHHHHHhhcC
Q psy1991         283 MHTCSHNGCGKTYTKSSHLKAHLRTHTG  310 (366)
Q Consensus       283 ~H~C~~~~CgK~F~skssLk~H~rtH~~  310 (366)
                      .+.|..++|+..|.....|..|+-.|+|
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            3444444455555555555555444444

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.64  E-value=0.068  Score=32.62  Aligned_cols=28  Identities=36%  Similarity=0.846  Sum_probs=21.0

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhh-hcCC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRK-HTGD  341 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rt-Htge  341 (366)
                      +||.|.+  |..+-...++|+.|+++ |..+
T Consensus         1 kpy~cqy--c~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQY--CEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccc--cccccccchhhhhhhhcccccC
Confidence            5788855  88888888888888775 4433

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.54  E-value=0.045  Score=33.01  Aligned_cols=24  Identities=42%  Similarity=0.982  Sum_probs=19.2

Q ss_pred             eeecCCCCCcccCchhHHHHHHhh
Q psy1991         285 TCSHNGCGKTYTKSSHLKAHLRTH  308 (366)
Q Consensus       285 ~C~~~~CgK~F~skssLk~H~rtH  308 (366)
                      .|+..+|+|.|...+.++.|+.+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            377778888888888888888776

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.08  E-value=0.064  Score=32.02  Aligned_cols=26  Identities=38%  Similarity=0.782  Sum_probs=23.5

Q ss_pred             eeeecCCCCCcccCchhHHHHHHhhc
Q psy1991         284 HTCSHNGCGKTYTKSSHLKAHLRTHT  309 (366)
Q Consensus       284 H~C~~~~CgK~F~skssLk~H~rtH~  309 (366)
                      +.|..++|+|.|+....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            56888999999999999999998885

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.88  E-value=0.054  Score=33.43  Aligned_cols=30  Identities=37%  Similarity=0.823  Sum_probs=28.0

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcCC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTGD  341 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtge  341 (366)
                      |.|.|.++.|+..|.....|..|+-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            569999999999999999999999999986

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.51  E-value=0.06  Score=34.21  Aligned_cols=21  Identities=29%  Similarity=0.835  Sum_probs=17.4

Q ss_pred             CeecCccccccCChhHHHHHh
Q psy1991         343 PFQCTLCERAFSRSDHLSLHM  363 (366)
Q Consensus       343 pykC~~CgKsFs~kssLk~H~  363 (366)
                      .|.|..|||.|.++..+.+|-
T Consensus         4 afvcskcgktftrrntm~rha   24 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHA   24 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHh
Confidence            478888888888888888884

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.09  E-value=0.16  Score=30.79  Aligned_cols=23  Identities=35%  Similarity=0.951  Sum_probs=16.2

Q ss_pred             ceecCCCCCCCcccChHHHHHHhhh
Q psy1991         313 PYQCGWKGCGWKFARSDELTRHFRK  337 (366)
Q Consensus       313 pf~C~i~~CgKsF~sk~~L~~H~rt  337 (366)
                      ||.|.  .|...|.++.+|..||+.
T Consensus         1 py~C~--~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCT--YCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECS--SSSCEESSHHHHHHHHHS
T ss_pred             Ccccc--eeeeeEeeccchhHhhhh
Confidence            56773  377777777777777763

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.45  E-value=0.12  Score=30.94  Aligned_cols=20  Identities=25%  Similarity=0.458  Sum_probs=11.1

Q ss_pred             CCCCCcccChHHHHHHhhhh
Q psy1991         319 KGCGWKFARSDELTRHFRKH  338 (366)
Q Consensus       319 ~~CgKsF~sk~~L~~H~rtH  338 (366)
                      ++|..+..++..|+.|.|+|
T Consensus         6 ~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           6 SECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SSSSCEESSHHHHHHHHGGG
T ss_pred             cccccccCcHHHHHHhhccc
Confidence            44555555555555555544

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.24  E-value=0.24  Score=29.94  Aligned_cols=21  Identities=33%  Similarity=0.833  Sum_probs=10.8

Q ss_pred             cCCCCCCCcccChHHHHHHhh
Q psy1991         316 CGWKGCGWKFARSDELTRHFR  336 (366)
Q Consensus       316 C~i~~CgKsF~sk~~L~~H~r  336 (366)
                      |++++|||.|+++..|..|.+
T Consensus         3 cdf~gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           3 CDFPGCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             CSSTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCchhhhccHHHHHhHHH
Confidence            444555555555555555543

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.23  E-value=0.13  Score=30.84  Aligned_cols=22  Identities=27%  Similarity=0.862  Sum_probs=17.0

Q ss_pred             CeecCccccccCChhHHHHHhh
Q psy1991         343 PFQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       343 pykC~~CgKsFs~kssLk~H~K  364 (366)
                      .|+|+.|+....++++|+.|++
T Consensus         2 k~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhh
Confidence            3678888888888888888875

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.13  E-value=0.16  Score=30.72  Aligned_cols=23  Identities=26%  Similarity=0.751  Sum_probs=20.4

Q ss_pred             eeecCCCCCcccCchhHHHHHHh
Q psy1991         285 TCSHNGCGKTYTKSSHLKAHLRT  307 (366)
Q Consensus       285 ~C~~~~CgK~F~skssLk~H~rt  307 (366)
                      .|..++|||.|+++.-|..|.+-
T Consensus         2 ~cdf~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCchhhhccHHHHHhHHHH
Confidence            38889999999999999999875

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.53  E-value=0.098  Score=35.76  Aligned_cols=21  Identities=29%  Similarity=0.755  Sum_probs=11.7

Q ss_pred             eecCccccccCChhHHHHHhh
Q psy1991         344 FQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       344 ykC~~CgKsFs~kssLk~H~K  364 (366)
                      |.|..|||.|.....|+.|..
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEA   27 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEA   27 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHH
T ss_pred             eeccccccccCCHHHHhHhHH
Confidence            455555555555555555544

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.43  E-value=0.25  Score=29.92  Aligned_cols=27  Identities=26%  Similarity=0.956  Sum_probs=21.6

Q ss_pred             CceecCCCCCCCcccChHHHHHHhhhhcC
Q psy1991         312 KPYQCGWKGCGWKFARSDELTRHFRKHTG  340 (366)
Q Consensus       312 Kpf~C~i~~CgKsF~sk~~L~~H~rtHtg  340 (366)
                      +||+|.+  |...-.+.++|..|++.-++
T Consensus         1 rPFkC~~--CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNY--CSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSS--SSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccce--ecccccCcchHHHHHHHHcc
Confidence            5899966  98888889999999876444

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.26  E-value=0.22  Score=29.10  Aligned_cols=21  Identities=33%  Similarity=0.982  Sum_probs=14.7

Q ss_pred             eecCccccccCChhHHHHHhh
Q psy1991         344 FQCTLCERAFSRSDHLSLHMK  364 (366)
Q Consensus       344 ykC~~CgKsFs~kssLk~H~K  364 (366)
                      |.|+.|=|.|.++.++..|.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            567777777777777777765

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.00  E-value=0.4  Score=28.67  Aligned_cols=22  Identities=27%  Similarity=0.603  Sum_probs=11.8

Q ss_pred             ecCccccccCChhHHHHHhhcC
Q psy1991         345 QCTLCERAFSRSDHLSLHMKRH  366 (366)
Q Consensus       345 kC~~CgKsFs~kssLk~H~KtH  366 (366)
                      +|+.|..+.+.+..|+.|.|+|
T Consensus         4 kc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           4 KCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGG
T ss_pred             cCcccccccCcHHHHHHhhccc
Confidence            4555555555555555555544

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.42  E-value=0.37  Score=28.87  Aligned_cols=25  Identities=28%  Similarity=0.675  Sum_probs=20.1

Q ss_pred             ecCCCCCCCcccChHHHHHHhhhhc
Q psy1991         315 QCGWKGCGWKFARSDELTRHFRKHT  339 (366)
Q Consensus       315 ~C~i~~CgKsF~sk~~L~~H~rtHt  339 (366)
                      .|+..+|+|.|+..+.++.|+-+|-
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGGS
T ss_pred             cCCcccHHHHhhchHHHHHHhhccC
Confidence            5666778899999999988887773

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.93  E-value=0.35  Score=28.17  Aligned_cols=22  Identities=32%  Similarity=0.904  Sum_probs=19.6

Q ss_pred             ceecCCCCCCCcccChHHHHHHhh
Q psy1991         313 PYQCGWKGCGWKFARSDELTRHFR  336 (366)
Q Consensus       313 pf~C~i~~CgKsF~sk~~L~~H~r  336 (366)
                      ||+|  ..|...|..+.+|..||.
T Consensus         2 pykc--sscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKC--SSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEEC--SSSCCEESSHHHHHHHHH
T ss_pred             CCcc--cHHHHHHHHHHHHHHHHH
Confidence            7999  669999999999999975

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=81.02  E-value=0.53  Score=27.98  Aligned_cols=23  Identities=30%  Similarity=0.790  Sum_probs=19.2

Q ss_pred             ceecCCCCCCCcccChHHHHHHhhh
Q psy1991         313 PYQCGWKGCGWKFARSDELTRHFRK  337 (366)
Q Consensus       313 pf~C~i~~CgKsF~sk~~L~~H~rt  337 (366)
                      ||+|  ..|||.+.++.+|..|...
T Consensus         1 pf~c--~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFEC--PKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBC--TTTCCBCSSHHHHHHHHHH
T ss_pred             CCcc--ccchhhhhhHhHHHHHHHH
Confidence            6889  6699999999999998653